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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_015170 Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence 3 crisprs WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3 0 11 0 0
NC_015162 Deinococcus proteolyticus MRP plasmid pDEIPR02, complete sequence 0 crisprs cas14j,csa3 0 0 1 0
NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 1 crisprs csa3 0 17 0 0
NC_015161 Deinococcus proteolyticus MRP, complete sequence 1 crisprs DEDDh,csa3,cas3 0 4 1 0
NC_015163 Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence 1 crisprs NA 0 4 1 0

Results visualization

1. NC_015170
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015170_1 5412-5768 Orphan NA
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015170_2 53434-53766 TypeI-E NA
5 spacers
WYL,cas3,cas8e,cse2gr11,cas7

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015170_3 68585-68675 TypeI-E NA
1 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_015170_1 1.1|5433|37|NC_015170|CRT 5433-5469 37 NC_015170 Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence 5433-5469 0 1.0
NC_015170_1 1.3|5579|36|NC_015170|CRT 5579-5614 36 NC_015170 Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence 5579-5614 0 1.0
NC_015170_1 1.4|5636|47|NC_015170|CRT 5636-5682 47 NC_015170 Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence 5636-5682 0 1.0
NC_015170_1 1.5|5704|44|NC_015170|CRT 5704-5747 44 NC_015170 Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence 5704-5747 0 1.0
NC_015170_2 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53462-53494 33 NC_015170 Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence 53462-53494 0 1.0
NC_015170_2 2.2|53523|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53523-53555 33 NC_015170 Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence 53523-53555 0 1.0
NC_015170_2 2.3|53584|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53584-53616 33 NC_015170 Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence 53584-53616 0 1.0
NC_015170_2 2.4|53645|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53645-53677 33 NC_015170 Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence 53645-53677 0 1.0
NC_015170_2 2.5|53706|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53706-53738 33 NC_015170 Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence 53706-53738 0 1.0
NC_015170_3 3.1|68615|31|NC_015170|CRISPRCasFinder 68615-68645 31 NC_015170 Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence 68615-68645 0 1.0
NC_015170_1 1.3|5579|36|NC_015170|CRT 5579-5614 36 NC_015170 Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence 5604-5639 6 0.833
NC_015170_3 3.1|68615|31|NC_015170|CRISPRCasFinder 68615-68645 31 NC_012849 Ralstonia pickettii 12D plasmid pRp12D02, complete sequence 251093-251123 6 0.806
NC_015170_1 1.2|5491|67|NC_015170|CRT 5491-5557 67 NC_015170 Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence 5491-5557 7 0.896
NC_015170_2 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53462-53494 33 MH834620 Arthrobacter phage Melons, complete genome 10832-10864 7 0.788
NC_015170_2 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53462-53494 33 MH834606 Arthrobacter phage Coral, complete genome 10671-10703 7 0.788
NC_015170_2 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53462-53494 33 MH834618 Arthrobacter phage Lunar, complete genome 10832-10864 7 0.788
NC_015170_2 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53462-53494 33 MN234214 Arthrobacter phage Amelia, complete genome 10832-10864 7 0.788
NC_015170_2 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53462-53494 33 MH834624 Arthrobacter phage Polka, complete genome 10674-10706 7 0.788
NC_015170_2 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53462-53494 33 MH834608 Arthrobacter phage Cote, complete genome 10832-10864 7 0.788
NC_015170_2 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53462-53494 33 MH834616 Arthrobacter phage Kepler, complete genome 10670-10702 7 0.788
NC_015170_2 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53462-53494 33 MH834609 Arthrobacter phage Daob, complete genome 10835-10867 7 0.788
NC_015170_2 2.2|53523|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53523-53555 33 KY945355 Mycobacterium phage Shandong1, complete genome 11585-11617 8 0.758
NC_015170_3 3.1|68615|31|NC_015170|CRISPRCasFinder 68615-68645 31 NZ_LR594663 Variovorax sp. RA8 plasmid 2 102499-102529 8 0.742
NC_015170_2 2.2|53523|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53523-53555 33 NC_023286 Streptomyces sp. F12 plasmid pFRL6, complete sequence 38904-38936 9 0.727
NC_015170_3 3.1|68615|31|NC_015170|CRISPRCasFinder 68615-68645 31 NZ_CP053023 Sphingobium yanoikuyae strain YC-XJ2 plasmid p-B-Sy, complete sequence 193139-193169 9 0.71
NC_015170_3 3.1|68615|31|NC_015170|CRISPRCasFinder 68615-68645 31 NZ_CP013266 Sphingobium baderi strain DE-13 plasmid pDE2, complete sequence 12971-13001 9 0.71
NC_015170_2 2.2|53523|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53523-53555 33 NC_004680 Mycobacterium phage Che8, complete genome 21503-21535 10 0.697
NC_015170_2 2.2|53523|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53523-53555 33 AY129330 Mycobacterium virus Che8, complete genome 21503-21535 10 0.697
NC_015170_2 2.2|53523|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT 53523-53555 33 KY385384 Mycobacterium phage SimranZ1, complete genome 21333-21365 10 0.697
NC_015170_1 1.5|5704|44|NC_015170|CRT 5704-5747 44 NC_015170 Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence 5769-5812 13 0.705

1. spacer 1.1|5433|37|NC_015170|CRT matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 0, identity: 1.0

cggaccggaaaaggtccaaagaacgctgcaagcaata	CRISPR spacer
cggaccggaaaaggtccaaagaacgctgcaagcaata	Protospacer
*************************************

2. spacer 1.3|5579|36|NC_015170|CRT matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 0, identity: 1.0

gcgtttcgataccgatacctttgggccgttttgata	CRISPR spacer
gcgtttcgataccgatacctttgggccgttttgata	Protospacer
************************************

3. spacer 1.4|5636|47|NC_015170|CRT matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 0, identity: 1.0

tggaggaatgggggtttatgccgtgccggacaaggtttttcctacgg	CRISPR spacer
tggaggaatgggggtttatgccgtgccggacaaggtttttcctacgg	Protospacer
***********************************************

4. spacer 1.5|5704|44|NC_015170|CRT matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 0, identity: 1.0

ggcttccattcccgacacctttgggccgtttgaccatttctttc	CRISPR spacer
ggcttccattcccgacacctttgggccgtttgaccatttctttc	Protospacer
********************************************

5. spacer 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 0, identity: 1.0

ccaacgccgaaaacgccgccgagtttagcgccc	CRISPR spacer
ccaacgccgaaaacgccgccgagtttagcgccc	Protospacer
*********************************

6. spacer 2.2|53523|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 0, identity: 1.0

cggcacccagcgcggcccggtggccctggagta	CRISPR spacer
cggcacccagcgcggcccggtggccctggagta	Protospacer
*********************************

7. spacer 2.3|53584|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 0, identity: 1.0

tacgcggcggcgtttaaggggcggaagcaggtc	CRISPR spacer
tacgcggcggcgtttaaggggcggaagcaggtc	Protospacer
*********************************

8. spacer 2.4|53645|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 0, identity: 1.0

tgccgaatcagaatcctgagagggtgacgaggc	CRISPR spacer
tgccgaatcagaatcctgagagggtgacgaggc	Protospacer
*********************************

9. spacer 2.5|53706|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 0, identity: 1.0

ttccccaagactgatgccgtggctgaaggttac	CRISPR spacer
ttccccaagactgatgccgtggctgaaggttac	Protospacer
*********************************

10. spacer 3.1|68615|31|NC_015170|CRISPRCasFinder matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 0, identity: 1.0

acatccaggcccggcgcttcattgttcgtgg	CRISPR spacer
acatccaggcccggcgcttcattgttcgtgg	Protospacer
*******************************

11. spacer 1.3|5579|36|NC_015170|CRT matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 6, identity: 0.833

gcgtttcgataccgatacctttgggccgttttgata	CRISPR spacer
ccgttttgataccgacacctttgggccgtttttgga	Protospacer
 *****.********.**************** . *

12. spacer 3.1|68615|31|NC_015170|CRISPRCasFinder matches to NC_012849 (Ralstonia pickettii 12D plasmid pRp12D02, complete sequence) position: , mismatch: 6, identity: 0.806

acatccaggcccggcgcttcattgttcgtgg	CRISPR spacer
acatccacgccctgcgcttcattgggcgggc	Protospacer
******* **** ***********  ** * 

13. spacer 1.2|5491|67|NC_015170|CRT matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 7, identity: 0.896

tttgtggaactttccatacccagccttttcttcgtcctatacacatttttttgcccaatg	CRISPR spacer
tttgtggaactttccatacccagccttttcttcgtcctatacacatttttttgcccaatg	Protospacer
************************************************************

14. spacer 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to MH834620 (Arthrobacter phage Melons, complete genome) position: , mismatch: 7, identity: 0.788

ccaacgccgaaaacgccgccgagtttagcgccc	CRISPR spacer
cgaacgccgaaaaagccgccgaggttttggcca	Protospacer
* *********** ********* **   *** 

15. spacer 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to MH834606 (Arthrobacter phage Coral, complete genome) position: , mismatch: 7, identity: 0.788

ccaacgccgaaaacgccgccgagtttagcgccc	CRISPR spacer
cgaacgccgaaaaagccgccgaggttttggcca	Protospacer
* *********** ********* **   *** 

16. spacer 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to MH834618 (Arthrobacter phage Lunar, complete genome) position: , mismatch: 7, identity: 0.788

ccaacgccgaaaacgccgccgagtttagcgccc	CRISPR spacer
cgaacgccgaaaaagccgccgaggttttggcca	Protospacer
* *********** ********* **   *** 

17. spacer 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to MN234214 (Arthrobacter phage Amelia, complete genome) position: , mismatch: 7, identity: 0.788

ccaacgccgaaaacgccgccgagtttagcgccc	CRISPR spacer
cgaacgccgaaaaagccgccgaggttttggcca	Protospacer
* *********** ********* **   *** 

18. spacer 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to MH834624 (Arthrobacter phage Polka, complete genome) position: , mismatch: 7, identity: 0.788

ccaacgccgaaaacgccgccgagtttagcgccc	CRISPR spacer
cgaacgccgaaaaagccgccgaggttttggcca	Protospacer
* *********** ********* **   *** 

19. spacer 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to MH834608 (Arthrobacter phage Cote, complete genome) position: , mismatch: 7, identity: 0.788

ccaacgccgaaaacgccgccgagtttagcgccc	CRISPR spacer
cgaacgccgaaaaagccgccgaggttttggcca	Protospacer
* *********** ********* **   *** 

20. spacer 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to MH834616 (Arthrobacter phage Kepler, complete genome) position: , mismatch: 7, identity: 0.788

ccaacgccgaaaacgccgccgagtttagcgccc	CRISPR spacer
cgaacgccgaaaaagccgccgaggttttggcca	Protospacer
* *********** ********* **   *** 

21. spacer 2.1|53462|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to MH834609 (Arthrobacter phage Daob, complete genome) position: , mismatch: 7, identity: 0.788

ccaacgccgaaaacgccgccgagtttagcgccc	CRISPR spacer
cgaacgccgaaaaagccgccgaggttttggcca	Protospacer
* *********** ********* **   *** 

22. spacer 2.2|53523|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to KY945355 (Mycobacterium phage Shandong1, complete genome) position: , mismatch: 8, identity: 0.758

cggcacccagcgcggcccggtggccctggagta	CRISPR spacer
cggcgccctgcgcggcccggtggcgacgcaggc	Protospacer
****.*** ***************  .* **  

23. spacer 3.1|68615|31|NC_015170|CRISPRCasFinder matches to NZ_LR594663 (Variovorax sp. RA8 plasmid 2) position: , mismatch: 8, identity: 0.742

acatccaggcccggcgcttcattgttcgtgg	CRISPR spacer
gcatccaggcccggcgtctcattgcgcctcc	Protospacer
.***************..******. * *  

24. spacer 2.2|53523|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to NC_023286 (Streptomyces sp. F12 plasmid pFRL6, complete sequence) position: , mismatch: 9, identity: 0.727

cggcacccagcgcggcccggtggccctggagta	CRISPR spacer
ggcgggccagcgcggccgggtggccccggacga	Protospacer
 *  . *********** ********.***  *

25. spacer 3.1|68615|31|NC_015170|CRISPRCasFinder matches to NZ_CP053023 (Sphingobium yanoikuyae strain YC-XJ2 plasmid p-B-Sy, complete sequence) position: , mismatch: 9, identity: 0.71

acatccaggcccggcgcttcattgttcgtgg	CRISPR spacer
acatgcagggccggcgcttcattgagaagac	Protospacer
**** **** **************   . . 

26. spacer 3.1|68615|31|NC_015170|CRISPRCasFinder matches to NZ_CP013266 (Sphingobium baderi strain DE-13 plasmid pDE2, complete sequence) position: , mismatch: 9, identity: 0.71

acatccaggcccggcgcttcattgttcgtgg	CRISPR spacer
acatgcagggccggcgcttcattgagaagac	Protospacer
**** **** **************   . . 

27. spacer 2.2|53523|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to NC_004680 (Mycobacterium phage Che8, complete genome) position: , mismatch: 10, identity: 0.697

cggcacccagcgcggcccggtggccctggagta	CRISPR spacer
actcacccagcccgggccggtggccctcatctg	Protospacer
   ******** *** *********** .  *.

28. spacer 2.2|53523|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to AY129330 (Mycobacterium virus Che8, complete genome) position: , mismatch: 10, identity: 0.697

cggcacccagcgcggcccggtggccctggagta	CRISPR spacer
actcacccagcccgggccggtggccctcatctg	Protospacer
   ******** *** *********** .  *.

29. spacer 2.2|53523|33|NC_015170|PILER-CR,CRISPRCasFinder,CRT matches to KY385384 (Mycobacterium phage SimranZ1, complete genome) position: , mismatch: 10, identity: 0.697

cggcacccagcgcggcccggtggccctggagta	CRISPR spacer
gctcacccagcccgggccggtggccctcatctg	Protospacer
   ******** *** *********** .  *.

30. spacer 1.5|5704|44|NC_015170|CRT matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 13, identity: 0.705

ggcttccattcccgacacctttgggccgtttgaccatttctttc	CRISPR spacer
ggcctccattcccgacacctttgggccgttttggtgccagaatg	Protospacer
***.*************************** . ....    * 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_015162
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 78685 : 118657 53 Streptococcus_phage(25.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NC_015169
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015169_1 197312-198572 Orphan I-C
17 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_015169_1 1.1|197349|37|NC_015169|CRISPRCasFinder,CRT 197349-197385 37 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 197349-197385 0 1.0
NC_015169_1 1.2|197423|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR 197423-197458 36 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 197423-197458 0 1.0
NC_015169_1 1.3|197496|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR 197496-197531 36 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 197496-197531 0 1.0
NC_015169_1 1.4|197569|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR 197569-197604 36 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 197569-197604 0 1.0
NC_015169_1 1.5|197642|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR 197642-197677 36 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 197642-197677 0 1.0
NC_015169_1 1.6|197715|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR 197715-197747 33 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 197715-197747 0 1.0
NC_015169_1 1.7|197785|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR 197785-197817 33 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 197785-197817 0 1.0
NC_015169_1 1.8|197855|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR 197855-197890 36 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 197855-197890 0 1.0
NC_015169_1 1.9|197928|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR 197928-197963 36 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 197928-197963 0 1.0
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 198001-198035 0 1.0
NC_015169_1 1.11|198073|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198073-198105 33 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 198073-198105 0 1.0
NC_015169_1 1.12|198143|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198143-198175 33 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 198143-198175 0 1.0
NC_015169_1 1.13|198213|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198213-198247 35 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 198213-198247 0 1.0
NC_015169_1 1.14|198285|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198285-198319 35 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 198285-198319 0 1.0
NC_015169_1 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198357-198391 35 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 198357-198391 0 1.0
NC_015169_1 1.16|198429|34|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198429-198462 34 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 198429-198462 0 1.0
NC_015169_1 1.17|198500|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198500-198535 36 NC_015169 Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence 198500-198535 0 1.0
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NC_013855 Azospirillum sp. B510 plasmid pAB510a, complete sequence 1042390-1042424 6 0.829
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NC_018683 Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence 552060-552094 7 0.8
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP026526 Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence 501384-501418 7 0.8
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP022542 Antarctobacter heliothermus strain SMS3 plasmid pSMS3-2, complete sequence 146904-146938 7 0.8
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP009145 Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence 1248754-1248788 7 0.8
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP021830 Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence 842719-842753 7 0.8
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP021824 Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence 1252304-1252338 7 0.8
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP021809 Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence 73353-73387 7 0.8
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP034185 Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence 394573-394607 7 0.8
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP015738 Shinella sp. HZN7 plasmid pShin-02, complete sequence 370251-370285 7 0.8
NC_015169_1 1.11|198073|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198073-198105 33 KC900378 Pseudomonas phage LKA5, complete genome 5306-5338 7 0.788
NC_015169_1 1.12|198143|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198143-198175 33 NZ_CP029333 Mycobacterium avium subsp. hominissuis strain MAC109 plasmid pMAC109a, complete sequence 52448-52480 7 0.788
NC_015169_1 1.12|198143|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198143-198175 33 NC_022654 Mycobacterium kansasii ATCC 12478 plasmid pMK12478, complete sequence 141856-141888 7 0.788
NC_015169_1 1.6|197715|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR 197715-197747 33 NZ_CP054621 Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence 506354-506386 8 0.758
NC_015169_1 1.8|197855|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR 197855-197890 36 NC_013855 Azospirillum sp. B510 plasmid pAB510a, complete sequence 882497-882532 8 0.778
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP054841 Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence 537273-537307 8 0.771
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP021819 Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence 283048-283082 8 0.771
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP032346 Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence 249870-249904 8 0.771
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 575332-575366 8 0.771
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP021813 Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence 96891-96925 8 0.771
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP054602 Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed3, complete sequence 119081-119115 8 0.771
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP007130 Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence 473170-473204 8 0.771
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP008890 Dermacoccus nishinomiyaensis strain M25 plasmid unnamed, complete sequence 9895-9929 8 0.771
NC_015169_1 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198357-198391 35 NZ_CP029834 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence 191157-191191 8 0.771
NC_015169_1 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198357-198391 35 NZ_CP007795 Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence 338783-338817 8 0.771
NC_015169_1 1.16|198429|34|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198429-198462 34 NC_048732 Klebsiella phage Seifer, complete genome 23465-23498 8 0.765
NC_015169_1 1.1|197349|37|NC_015169|CRISPRCasFinder,CRT 197349-197385 37 NC_010625 Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence 945654-945690 9 0.757
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP029833 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence 407461-407495 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP029831 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence 358964-358998 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP010380 Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence 61807-61841 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP026171 Leclercia sp. LSNIH1 plasmid pLEC-1cb1, complete sequence 29426-29460 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 CP009869 Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence 11577-11611 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP042479 Citrobacter freundii strain C50 plasmid pC50_001, complete sequence 51033-51067 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP040760 Paracoccus sp. 2251 plasmid unnamed6, complete sequence 23811-23845 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP032179 Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence 26426-26460 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP029142 Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence 216430-216464 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP031135 Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence 8842-8876 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP010862 Marinovum algicola DG 898 plasmid pMaD7 9730-9764 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP044111 Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2 343399-343433 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 1418518-1418552 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NC_009468 Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence 147874-147908 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP026242 Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence 208987-209021 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP009883 Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence 45697-45731 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP026196 Enterobacteriaceae bacterium ENNIH1 plasmid pENT-1f0b, complete sequence 180450-180484 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_AP021845 Azospira sp. I09 plasmid pAZI09, complete sequence 2542-2576 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NC_007765 Rhizobium etli CFN 42 plasmid p42e, complete sequence 66273-66307 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP020909 Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence 66111-66145 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP026208 Escherichia coli strain ECONIH5 plasmid pECO-109b, complete sequence 89121-89155 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP022191 Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence 166375-166409 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NC_021908 Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1d, complete sequence 66099-66133 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP026391 Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence 47846-47880 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_AP014803 Rhodovulum sulfidophilum plasmid Plasmid3 DNA, complete genome, strain: DSM 2351 9727-9761 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP011635 Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence 49709-49743 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP013115 Shewanella xiamenensis strain T17 plasmid pSx1, complete sequence 211496-211530 9 0.743
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NC_015178 Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence 3943-3977 9 0.743
NC_015169_1 1.12|198143|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198143-198175 33 NZ_CP007144 Hymenobacter swuensis DY53 plasmid pHsw1, complete sequence 193515-193547 9 0.727
NC_015169_1 1.12|198143|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198143-198175 33 NC_007765 Rhizobium etli CFN 42 plasmid p42e, complete sequence 302216-302248 9 0.727
NC_015169_1 1.12|198143|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198143-198175 33 NZ_CP020909 Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence 302652-302684 9 0.727
NC_015169_1 1.12|198143|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198143-198175 33 NZ_CP040764 Paracoccus sp. 2251 plasmid unnamed3, complete sequence 118291-118323 9 0.727
NC_015169_1 1.12|198143|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198143-198175 33 NC_021908 Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1d, complete sequence 308654-308686 9 0.727
NC_015169_1 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198357-198391 35 NZ_CP029357 Azospirillum sp. CFH 70021 plasmid unnamed2 322957-322991 9 0.743
NC_015169_1 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198357-198391 35 NZ_CP032323 Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence 768459-768493 9 0.743
NC_015169_1 1.8|197855|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR 197855-197890 36 NZ_CP017321 Xanthomonas campestris pv. campestris str. CN18 plasmid unnamed1, complete sequence 9778-9813 10 0.722
NC_015169_1 1.8|197855|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR 197855-197890 36 NZ_CP017320 Xanthomonas campestris pv. campestris str. CN18 plasmid unnamed2, complete sequence 2021-2056 10 0.722
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NC_013855 Azospirillum sp. B510 plasmid pAB510a, complete sequence 1422307-1422341 10 0.714
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_AP018666 Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete sequence 119975-120009 10 0.714
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP054841 Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence 240983-241017 10 0.714
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP020539 Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence 662334-662368 10 0.714
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP023451 Rhizorhabdus dicambivorans strain Ndbn-20 plasmid p2, complete sequence 135171-135205 10 0.714
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_AP017656 Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence 137881-137915 10 0.714
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP053022 Sphingobium yanoikuyae strain YC-XJ2 plasmid p-A-Sy, complete sequence 251359-251393 10 0.714
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP040763 Paracoccus sp. 2251 plasmid unnamed4, complete sequence 235936-235970 10 0.714
NC_015169_1 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198001-198035 35 NZ_CP054621 Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence 383206-383240 10 0.714
NC_015169_1 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198357-198391 35 NC_016110 Streptomyces pratensis ATCC 33331 plasmid pSFLA01, complete sequence 181235-181269 10 0.714
NC_015169_1 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198357-198391 35 NZ_CP018229 Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence 597190-597224 10 0.714
NC_015169_1 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198357-198391 35 NZ_CP022565 Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence 337815-337849 10 0.714
NC_015169_1 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198357-198391 35 NZ_CP050092 Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence 469934-469968 10 0.714
NC_015169_1 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198357-198391 35 NC_012848 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence 146126-146160 10 0.714
NC_015169_1 1.17|198500|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR 198500-198535 36 NC_018532 Arthrobacter sp. Rue61a plasmid p232, complete sequence 117528-117563 10 0.722

1. spacer 1.1|197349|37|NC_015169|CRISPRCasFinder,CRT matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

ctgctgaccagcggcgaggcgctgaccccgcaggaaa	CRISPR spacer
ctgctgaccagcggcgaggcgctgaccccgcaggaaa	Protospacer
*************************************

2. spacer 1.2|197423|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

ggttttgtgcgggcctattcgccaagcatcattcat	CRISPR spacer
ggttttgtgcgggcctattcgccaagcatcattcat	Protospacer
************************************

3. spacer 1.3|197496|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

acgctgattccaggcacagataaggtctacatccct	CRISPR spacer
acgctgattccaggcacagataaggtctacatccct	Protospacer
************************************

4. spacer 1.4|197569|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

aagatggtctgatatataaaggattttagagaaggt	CRISPR spacer
aagatggtctgatatataaaggattttagagaaggt	Protospacer
************************************

5. spacer 1.5|197642|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

gacagcgagagtcttccggccgcccccgtacggccg	CRISPR spacer
gacagcgagagtcttccggccgcccccgtacggccg	Protospacer
************************************

6. spacer 1.6|197715|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

gcgggcgaagagcaggccgaccagctctacaac	CRISPR spacer
gcgggcgaagagcaggccgaccagctctacaac	Protospacer
*********************************

7. spacer 1.7|197785|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

cgccgcaggggcagaagaaggagcatgtaccca	CRISPR spacer
cgccgcaggggcagaagaaggagcatgtaccca	Protospacer
*********************************

8. spacer 1.8|197855|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

gcccgtgtctggctcaggcggcggcgcagcacttcg	CRISPR spacer
gcccgtgtctggctcaggcggcggcgcagcacttcg	Protospacer
************************************

9. spacer 1.9|197928|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

gcggatttttccgccgacctgctgaaactgaaaaac	CRISPR spacer
gcggatttttccgccgacctgctgaaactgaaaaac	Protospacer
************************************

10. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cagacccgcgccagcagcgccgccagcgcggccgc	Protospacer
***********************************

11. spacer 1.11|198073|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

ttcaagagtgaggcggctggcccaacgaggcat	CRISPR spacer
ttcaagagtgaggcggctggcccaacgaggcat	Protospacer
*********************************

12. spacer 1.12|198143|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

tttgacgtacggcttgccggtgggcaccgccag	CRISPR spacer
tttgacgtacggcttgccggtgggcaccgccag	Protospacer
*********************************

13. spacer 1.13|198213|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

caagattgagagcgcacgcatagaaaacccgttta	CRISPR spacer
caagattgagagcgcacgcatagaaaacccgttta	Protospacer
***********************************

14. spacer 1.14|198285|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

gctattcattcagcccgaagtgaggtttgactcgt	CRISPR spacer
gctattcattcagcccgaagtgaggtttgactcgt	Protospacer
***********************************

15. spacer 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

atcaccggcagggcgggcggggcggccgcagagcg	CRISPR spacer
atcaccggcagggcgggcggggcggccgcagagcg	Protospacer
***********************************

16. spacer 1.16|198429|34|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

cggcccggagtgctgccacatgctgatcgcggag	CRISPR spacer
cggcccggagtgctgccacatgctgatcgcggag	Protospacer
**********************************

17. spacer 1.17|198500|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 0, identity: 1.0

gtaggtgagggtgtactcacgctcgaacaccttttt	CRISPR spacer
gtaggtgagggtgtactcacgctcgaacaccttttt	Protospacer
************************************

18. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 6, identity: 0.829

cagacccg-cgccagcagcgccgccagcgcggccgc	CRISPR spacer
-aggctggtcgccagcagcgccgccagcggggcggc	Protospacer
 **.*. * ******************** *** **

19. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 7, identity: 0.8

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgcggcagcgccagcagcggcgccagcgcggtcgc	Protospacer
*. . * ************ ***********.***

20. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.8

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgcggcagcgccagcagcggcgccagcgcggtcgc	Protospacer
*. . * ************ ***********.***

21. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022542 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-2, complete sequence) position: , mismatch: 7, identity: 0.8

cagacccgcgccagcagcgccgccagcgcggccgc-----	CRISPR spacer
cagacccgccccagcagcgccgcca-----gtcgcaaaaa	Protospacer
********* ***************     *.***     

22. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.8

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgcggcagcgccagcagcggcgccagcgcggtcgc	Protospacer
*. . * ************ ***********.***

23. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021830 (Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.8

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgcggcagcgccagcagcggcgccagcgcggtcgc	Protospacer
*. . * ************ ***********.***

24. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.8

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgcggcagcgccagcagcggcgccagcgcggtcgc	Protospacer
*. . * ************ ***********.***

25. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.8

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgcggcagcgccagcagcggcgccagcgcggtcgc	Protospacer
*. . * ************ ***********.***

26. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034185 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.8

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cacaccagcgccagcagcgccgccagccccatccc	Protospacer
** *** ******************** * ..* *

27. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015738 (Shinella sp. HZN7 plasmid pShin-02, complete sequence) position: , mismatch: 7, identity: 0.8

cagacccgcgccagcagcgccgccagcg-cggccgc	CRISPR spacer
cgatcccgccccagccgcgccgccagcgccggctg-	Protospacer
*.. ***** ***** ************ ****.* 

28. spacer 1.11|198073|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to KC900378 (Pseudomonas phage LKA5, complete genome) position: , mismatch: 7, identity: 0.788

ttcaagagtgaggcggctggcccaacgaggcat	CRISPR spacer
ctccagcaggatgcggctggcccaacgcggcat	Protospacer
.** ** . ** *************** *****

29. spacer 1.12|198143|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029333 (Mycobacterium avium subsp. hominissuis strain MAC109 plasmid pMAC109a, complete sequence) position: , mismatch: 7, identity: 0.788

tttgacgta---cggcttgccggtgggcaccgccag	CRISPR spacer
---gaagtggatcggcttgccgatggccaccgccag	Protospacer
   ** **.   **********.*** *********

30. spacer 1.12|198143|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_022654 (Mycobacterium kansasii ATCC 12478 plasmid pMK12478, complete sequence) position: , mismatch: 7, identity: 0.788

tttgacgta---cggcttgccggtgggcaccgccag	CRISPR spacer
---gaagtggatcggcttgccgatggccaccgccag	Protospacer
   ** **.   **********.*** *********

31. spacer 1.6|197715|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.758

gcgggcgaagagcaggccgaccagctctacaac	CRISPR spacer
ccaggcgaagagccagccgaccagctcagtgac	Protospacer
 *.********** .************ ...**

32. spacer 1.8|197855|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 8, identity: 0.778

gcccgtgtctggctcaggcggcggcgcagcacttcg	CRISPR spacer
ggctccgccgggctcaggcggcggcacagcgcttcg	Protospacer
* *. .*.* ***************.****.*****

33. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
tgggtccaggccagcagcgccgcgatcgcggccgc	Protospacer
..*..**. ************** * *********

34. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021819 (Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.771

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgcggcagggccagcagcggcgccagcgcggtcgc	Protospacer
*. . * * ********** ***********.***

35. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.771

cagacccg----cgccagcagcgccgccagcgcggccgc	CRISPR spacer
----cccggcaccgccagcagcggcgccagcgccgccag	Protospacer
    ****    *********** ********* ***. 

36. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 8, identity: 0.771

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
ccgcgcgccgccagcagcgccgccagcttggccgg	Protospacer
* *  *  ******************* .***** 

37. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.771

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgcggcagggccagcagcggcgccagcgcggtcgc	Protospacer
*. . * * ********** ***********.***

38. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054602 (Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.771

-cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
ccaagcgcat-ccagcagcgccgccagcgtggacgc	Protospacer
 **..* *.. ******************.** ***

39. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.771

--cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
ctcggact--ttccagtagcgccgcccgcgcggccgc	Protospacer
  *.***.  . ****.********* **********

40. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008890 (Dermacoccus nishinomiyaensis strain M25 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.771

cagacccgcgccagcagcgccgccagcgcggccgc-	CRISPR spacer
ataccccgcgcctgcagcgccgccaccgc-accgcg	Protospacer
  . ******** ************ *** .**** 

41. spacer 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029834 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.771

atcaccggcagggcgggcggggcggccgcagagcg	CRISPR spacer
cgcaccggcggggcgggcggggcggcctcggtcgg	Protospacer
  *******.***************** *.*   *

42. spacer 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 8, identity: 0.771

atcaccggcagggcgggcggggcggccgcagagcg	CRISPR spacer
atcaccggcagggcgggcgggttggcccaggcggt	Protospacer
********************* .****  .* *  

43. spacer 1.16|198429|34|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_048732 (Klebsiella phage Seifer, complete genome) position: , mismatch: 8, identity: 0.765

cggcccggagtgctgccacatgctgatcgcggag	CRISPR spacer
cggcccggactgctgccacctgctgacggtacat	Protospacer
********* ********* ******. *.. * 

44. spacer 1.1|197349|37|NC_015169|CRISPRCasFinder,CRT matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 9, identity: 0.757

ctgctgaccagcggcgaggcgctgaccccgcaggaaa	CRISPR spacer
ttgctgaccagcggcgacgcgcagaccatgccgccat	Protospacer
.**************** **** **** .** *  * 

45. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
tcgttgcgcgccagcagcgcctccagcgcggcgat	Protospacer
. * . *************** ********** ..

46. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
ttgacccgcgccagctccgccgccagcgcatcgtg	Protospacer
. *************  ************. *   

47. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010380 (Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgtctcagcgccagcagcgccgcccgcgctgctgg	Protospacer
*.  .* ***************** **** **.* 

48. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026171 (Leclercia sp. LSNIH1 plasmid pLEC-1cb1, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgtctcagcgccagcagcgccgcccgcgctgctgg	Protospacer
*.  .* ***************** **** **.* 

49. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to CP009869 (Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgtctcagcgccagcagcgccgcccgcgctgctgg	Protospacer
*.  .* ***************** **** **.* 

50. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042479 (Citrobacter freundii strain C50 plasmid pC50_001, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgtctcagcgccagcagcgccgcccgcgctgctgg	Protospacer
*.  .* ***************** **** **.* 

51. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040760 (Paracoccus sp. 2251 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
gacgcgcccgacagcagcgcctccagcgcggccta	Protospacer
 * .* * ** ********** ***********  

52. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032179 (Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgtctcagcgccagcagcgccgcccgcgctgctgg	Protospacer
*.  .* ***************** **** **.* 

53. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029142 (Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgtctcagcgccagcagcgccgcccgcgctgctgg	Protospacer
*.  .* ***************** **** **.* 

54. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031135 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgtctcagcgccagcagcgccgcccgcgctgctgg	Protospacer
*.  .* ***************** **** **.* 

55. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010862 (Marinovum algicola DG 898 plasmid pMaD7) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
atcgcccagaccagaagcgccgccagcgccgccgc	Protospacer
   .***. .**** ************** *****

56. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044111 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgtctcagcgccagcagcgccgcccgcgctgctgg	Protospacer
*.  .* ***************** **** **.* 

57. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
aaacggcggtccagcagcggcgccagcgtggccgc	Protospacer
 *.   **  ********* ********.******

58. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_009468 (Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
ctcgccggcgcccgcagcgccgccagcgcctatgc	Protospacer
*  .** ***** ****************   .**

59. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026242 (Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgtctcagcgccagcagcgccgcccgcgctgctgg	Protospacer
*.  .* ***************** **** **.* 

60. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009883 (Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgtctcagcgccagcagcgccgcccgcgctgctgg	Protospacer
*.  .* ***************** **** **.* 

61. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026196 (Enterobacteriaceae bacterium ENNIH1 plasmid pENT-1f0b, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgtctcagcgccagcagcgccgcccgcgctgctgg	Protospacer
*.  .* ***************** **** **.* 

62. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP021845 (Azospira sp. I09 plasmid pAZI09, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgtctcagcgccagcagcgccgcccgcgctgctgg	Protospacer
*.  .* ***************** **** **.* 

63. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_007765 (Rhizobium etli CFN 42 plasmid p42e, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
gcgtccctcgccagccgcgccgccagcgcctcgcc	Protospacer
  * *** ******* *************  *  *

64. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020909 (Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
gcgtccctcgccagccgcgccgccagcgcctcgcc	Protospacer
  * *** ******* *************  *  *

65. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026208 (Escherichia coli strain ECONIH5 plasmid pECO-109b, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgtctcagcgccagcagcgccgcccgcgctgctgg	Protospacer
*.  .* ***************** **** **.* 

66. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022191 (Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cagagcagcgccagcagcgccgccatgaggtttgc	Protospacer
**** * ******************  . * ..**

67. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_021908 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1d, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
gcgtccctcgccagccgcgccgccagcgcctcgcc	Protospacer
  * *** ******* *************  *  *

68. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026391 (Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgtctcagcgccagcagcgccgcccgcgctgctgg	Protospacer
*.  .* ***************** **** **.* 

69. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014803 (Rhodovulum sulfidophilum plasmid Plasmid3 DNA, complete genome, strain: DSM 2351) position: , mismatch: 9, identity: 0.743

--cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
agcgga--tagaccagcagcgccgccagcgcaggcgc	Protospacer
  *.**  .. .*******************.* ***

70. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011635 (Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgtctcagcgccagcagcgccgcccgcgctgctgg	Protospacer
*.  .* ***************** **** **.* 

71. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013115 (Shewanella xiamenensis strain T17 plasmid pSx1, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
cgtctcagcgccagcagcgccgcccgcgctgctgg	Protospacer
*.  .* ***************** **** **.* 

72. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_015178 (Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence) position: , mismatch: 9, identity: 0.743

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
ctcgccggcgcccgcagcgccgccagcgcctatgc	Protospacer
*  .** ***** ****************   .**

73. spacer 1.12|198143|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007144 (Hymenobacter swuensis DY53 plasmid pHsw1, complete sequence) position: , mismatch: 9, identity: 0.727

tttgacgtacggcttgccggtgggcaccgccag	CRISPR spacer
caaggcatatggcttgccggtggccaccgcctc	Protospacer
.  *.*.**.************* *******  

74. spacer 1.12|198143|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_007765 (Rhizobium etli CFN 42 plasmid p42e, complete sequence) position: , mismatch: 9, identity: 0.727

tttgacgtacggcttgccggtgggcaccgccag	CRISPR spacer
ggagagaaacggcttgccggtgggaagcgccat	Protospacer
   ** . **************** * ***** 

75. spacer 1.12|198143|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020909 (Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence) position: , mismatch: 9, identity: 0.727

tttgacgtacggcttgccggtgggcaccgccag	CRISPR spacer
ggagagaaacggcttgccggtgggaagcgccat	Protospacer
   ** . **************** * ***** 

76. spacer 1.12|198143|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040764 (Paracoccus sp. 2251 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.727

tttgacgtacggcttgccggtgggcaccgccag	CRISPR spacer
cgtgggcgaccgcctgccggtgggcaccgccac	Protospacer
. **.   ** **.****************** 

77. spacer 1.12|198143|33|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_021908 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1d, complete sequence) position: , mismatch: 9, identity: 0.727

tttgacgtacggcttgccggtgggcaccgccag	CRISPR spacer
ggagagaaacggcttgccggtgggaagcgccat	Protospacer
   ** . **************** * ***** 

78. spacer 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 9, identity: 0.743

atcaccggcagggcgggcggggcggccgcagagcg	CRISPR spacer
acgcccggcagggcggacagggcggccgcagcctc	Protospacer
*.  ************.*.************  . 

79. spacer 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.743

atcaccggcagggcgggcggggcggccgcagagcg	CRISPR spacer
accaccggcagggcgggcgggttggcccaggcggt	Protospacer
*.******************* .****  .* *  

80. spacer 1.8|197855|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017321 (Xanthomonas campestris pv. campestris str. CN18 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.722

gcccgtgtctggctcaggcggcggcgcagcacttcg	CRISPR spacer
aaaccgatctggctcggtcggcggcgcagcactacc	Protospacer
.  *  .********.* *************** * 

81. spacer 1.8|197855|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017320 (Xanthomonas campestris pv. campestris str. CN18 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.722

gcccgtgtctggctcaggcggcggcgcagcacttcg	CRISPR spacer
aaaccgatctggctcggtcggcggcgcagcactacc	Protospacer
.  *  .********.* *************** * 

82. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 10, identity: 0.714

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
atggcccgcgccagcagcaccgccggcgcattcca	Protospacer
  *.**************.*****.****. .*  

83. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018666 (Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete sequence) position: , mismatch: 10, identity: 0.714

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
gcagcccgcgccagcagcaccgcgagcgcgcagga	Protospacer
  ..**************.**** ******   * 

84. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
tggcggtcggccagcagcgccggcagcgcgggcgc	Protospacer
..*   .  ************* ******** ***

85. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 10, identity: 0.714

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
gcagcccgcgccagcagcaccgcgagcgcgcagga	Protospacer
  ..**************.**** ******   * 

86. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023451 (Rhizorhabdus dicambivorans strain Ndbn-20 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.714

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
gcagcccgcgccagcagcaccgcgagcgcgcagga	Protospacer
  ..**************.**** ******   * 

87. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017656 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence) position: , mismatch: 10, identity: 0.714

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
gcagcccgcgccagcagcaccgcgagcgcgcagga	Protospacer
  ..**************.**** ******   * 

88. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053022 (Sphingobium yanoikuyae strain YC-XJ2 plasmid p-A-Sy, complete sequence) position: , mismatch: 10, identity: 0.714

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
gcagcccgcgccagcagcaccgcgagcgcgcagga	Protospacer
  ..**************.**** ******   * 

89. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040763 (Paracoccus sp. 2251 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.714

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
gcaagccgcgcgatcagcgccgccagcgcgtcgaa	Protospacer
  .* ****** * **************** * . 

90. spacer 1.10|198001|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 10, identity: 0.714

cagacccgcgccagcagcgccgccagcgcggccgc	CRISPR spacer
atggcccgcgccagcagcaccgccggcgcattcca	Protospacer
  *.**************.*****.****. .*  

91. spacer 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_016110 (Streptomyces pratensis ATCC 33331 plasmid pSFLA01, complete sequence) position: , mismatch: 10, identity: 0.714

atcaccggcagggcgggcggggcggccgcagagcg	CRISPR spacer
ggtaccggcggggcgggcggggaggccgcccgccc	Protospacer
. .******.************ ******  . * 

92. spacer 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

atcaccggcagggcgggcggggcggccgcagagcg	CRISPR spacer
cccatcggcagggcgggcgtggcggcccacttccg	Protospacer
 .**.************** *******      **

93. spacer 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 10, identity: 0.714

atcaccggcagggcgggcggggcggccgcagagcg	CRISPR spacer
cccatcggcagggcgggcgtggcggcccacttccg	Protospacer
 .**.************** *******      **

94. spacer 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050092 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence) position: , mismatch: 10, identity: 0.714

atcaccggcagggcgggcggggcggccgcagagcg	CRISPR spacer
cccatcggcagggcgggcgtggcggcccacttccg	Protospacer
 .**.************** *******      **

95. spacer 1.15|198357|35|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_012848 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence) position: , mismatch: 10, identity: 0.714

atcaccggcagggcgggcggggcggccgcagagcg	CRISPR spacer
cccatcggcagggcgggcgtggcggcccacttccg	Protospacer
 .**.************** *******      **

96. spacer 1.17|198500|36|NC_015169|CRISPRCasFinder,CRT,PILER-CR matches to NC_018532 (Arthrobacter sp. Rue61a plasmid p232, complete sequence) position: , mismatch: 10, identity: 0.722

gtaggtgagggtgtactcacgctcgaacaccttttt	CRISPR spacer
tgcggtgggggtgtacgcacgctcgaacacggtgcc	Protospacer
   ****.******** *************  * ..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NC_015161
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015161_1 385086-385358 Orphan NA
4 spacers

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Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP019460 Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence 13683-13714 6 0.812
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP019460 Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence 29160-29191 6 0.812
NC_015161_1 1.1|385115|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385115-385146 32 MG945797 UNVERIFIED: Microviridae sp. isolate 4494-1801, complete genome 2944-2975 8 0.75
NC_015161_1 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385176-385207 32 NC_012586 Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence 2243987-2244018 8 0.75
NC_015161_1 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385176-385207 32 LR606150 Rhizobium sp. Q54 genome assembly, plasmid: 7 24946-24977 8 0.75
NC_015161_1 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385176-385207 32 NZ_CP049906 Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence 224414-224445 8 0.75
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP046321 Gordonia bronchialis strain FDAARGOS_676 plasmid unnamed1, complete sequence 4479-4510 8 0.75
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NC_013442 Gordonia bronchialis DSM 43247 plasmid pGBRO01, complete sequence 232-263 8 0.75
NC_015161_1 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385176-385207 32 NC_014213 Meiothermus silvanus DSM 9946 plasmid pMESIL01, complete sequence 298958-298989 9 0.719
NC_015161_1 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385176-385207 32 NC_017326 Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence 1403283-1403314 9 0.719
NC_015161_1 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385176-385207 32 NC_018701 Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence 1420389-1420420 9 0.719
NC_015161_1 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385176-385207 32 NZ_CP021828 Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence 1555954-1555985 9 0.719
NC_015161_1 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385176-385207 32 NZ_CP021802 Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence 20574-20605 9 0.719
NC_015161_1 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385176-385207 32 NZ_CP021820 Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence 99670-99701 9 0.719
NC_015161_1 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385176-385207 32 NZ_CP021795 Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence 1205107-1205138 9 0.719
NC_015161_1 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385176-385207 32 NZ_CP021810 Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence 544286-544317 9 0.719
NC_015161_1 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385176-385207 32 NZ_CP021806 Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence 1257836-1257867 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP025081 Klebsiella pneumoniae strain SGH10 plasmid pSGH10, complete sequence 117751-117782 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP031258 Klebsiella quasipneumoniae strain L22 plasmid pL22-1, complete sequence 23652-23683 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 CP052163 Klebsiella pneumoniae strain F16KP0082 plasmid pF16KP0082-1, complete sequence 60048-60079 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP030924 Klebsiella pneumoniae subsp. pneumoniae strain KC-Pl-HB1 plasmid pKC-Pl-HB1, complete sequence 34916-34947 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP026022 Klebsiella pneumoniae strain 11492 plasmid p11492-CTXM, complete sequence 177481-177512 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP014011 Klebsiella pneumoniae subsp. pneumoniae strain RJF999 plasmid pRJF999, complete sequence 14453-14484 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP037743 Klebsiella pneumoniae strain ST23 plasmid pDHQP1701672_hv, complete sequence 115342-115373 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 CP052159 Klebsiella pneumoniae strain F16KP0084 plasmid pF16KP0084-1, complete sequence 117455-117486 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 MN200128 Klebsiella pneumoniae strain 17ZR-91 plasmid p17ZR-91-Vir-RC, complete sequence 92562-92593 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 MN200130 Escherichia coli strain EC600 plasmid p17ZR-91-TC1, complete sequence 92545-92576 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 MN543581 Klebsiella pneumoniae strain PM48TC plasmid pPM48TC_fusion, complete sequence 98930-98961 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 MN543585 Klebsiella pneumoniae strain GH27TC plasmid pGH27TC_fusion, complete sequence 91655-91686 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 MN543575 Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_fusion, complete sequence 107778-107809 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 MN543576 Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_vir, complete sequence 102321-102352 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 CP052144 Klebsiella pneumoniae strain F17KP0012 plasmid pF17KP0012-1, complete sequence 118006-118037 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 CP052363 Klebsiella pneumoniae strain D16KP0122 plasmid pD16KP0122-1, complete sequence 108508-108539 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP019049 Klebsiella pneumoniae subsp. pneumoniae strain RJA166 plasmid pRJA166b, complete sequence 226066-226097 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP024708 Klebsiella pneumoniae strain cr-hvkp3 plasmid pPUTH1, complete sequence 203664-203695 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP034776 Klebsiella pneumoniae strain 18CPO060 plasmid phvKP060, complete sequence 155031-155062 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 CP052357 Klebsiella pneumoniae strain D16KP0144 plasmid pD16KP0144-1, complete sequence 118782-118813 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_LR134257 Klebsiella aerogenes strain NCTC9644 plasmid 4, complete sequence 172067-172098 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP027063 Klebsiella variicola strain WCHKV030666 plasmid pVir_030666, complete sequence 99838-99869 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 CP052445 Klebsiella pneumoniae strain C16KP0098 plasmid pC16KP0098-2, complete sequence 108032-108063 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_FO834905 Klebsiella pneumoniae strain Kp52.145 plasmid II, complete sequence 24909-24940 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP014009 Klebsiella pneumoniae subsp. pneumoniae strain RJF293 plasmid pRJF293, complete sequence 124534-124565 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP006989 Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence 259365-259396 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 LR134211 Klebsiella aerogenes strain NCTC418 genome assembly, plasmid: 2 156154-156185 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NC_005249 Klebsiella pneumoniae CG43 plasmid pLVPK, complete sequence 91168-91199 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP036191 Klebsiella pneumoniae strain BA34918 plasmid pvirulence_VBA34918, complete sequence 5216-5247 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NC_006625 Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 plasmid pK2044, complete sequence 17132-17163 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP019161 Klebsiella pneumoniae strain GN-2 plasmid pGN-2, complete sequence 19483-19514 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 CP052563 Klebsiella pneumoniae strain A16KP0135 plasmid pA16KP0135-1, complete sequence 116674-116705 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_AP019666 Klebsiella pneumoniae strain TA6363 plasmid pTMTA63631, complete sequence 99165-99196 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP035906 Klebsiella pneumoniae strain BA4656 plasmid unnamed1, complete sequence 156677-156708 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 MF943217 Klebsiella pneumoniae strain WCHKP13F2 plasmid pVir_WCHKP13F2, complete sequence 53773-53804 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 CP052190 Klebsiella pneumoniae strain F16KP0019 plasmid pF16KP0019-1, complete sequence 118006-118037 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP030270 Klebsiella pneumoniae subsp. pneumoniae strain SC-7 plasmid pSC7-vir, complete sequence 116181-116212 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP035384 Klebsiella pneumoniae strain AP8555 plasmid pAP855, complete sequence 246073-246104 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP023723 Klebsiella pneumoniae strain TVGHCRE225 plasmid unnamed1, complete sequence 104563-104594 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP047678 Klebsiella pneumoniae subsp. pneumoniae strain KUH-KPNHVF1 plasmid unnamed, complete sequence 17108-17139 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP026166 Klebsiella pneumoniae strain F81 plasmid pF81_2, complete sequence 109421-109452 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP047676 Klebsiella pneumoniae subsp. pneumoniae strain KUH-KPNHVL1 plasmid unnamed, complete sequence 17108-17139 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 CP052304 Klebsiella pneumoniae strain E16KP0172 plasmid pE16KP0172-1, complete sequence 119333-119364 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP052037 Klebsiella pneumoniae strain KPN41053 plasmid pKPN41953, complete sequence 132340-132371 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 CP052204 Klebsiella pneumoniae strain F16KP0002 plasmid pF16KP0002-1, complete sequence 118007-118038 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 CP023135 Klebsiella pneumoniae subsp. pneumoniae strain KpvK54 plasmid pKpvK54, complete sequence 27402-27433 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 CP007642 Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803a, complete sequence 247693-247724 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 CP052178 Klebsiella pneumoniae strain F16KP0045 plasmid pF16KP0045-1, complete sequence 79545-79576 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP028390 Klebsiella pneumoniae strain WCHKP13F2 plasmid pVir_095132, complete sequence 105005-105036 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP045692 Klebsiella pneumoniae strain TK421 plasmid pTK421_2, complete sequence 111807-111838 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP034083 Klebsiella pneumoniae subsp. pneumoniae strain R210-2 plasmid pR210-2-vir, complete sequence 117747-117778 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP042975 Klebsiella pneumoniae strain KPN55602 plasmid pK55602_1, complete sequence 93688-93719 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP026012 Klebsiella pneumoniae strain K2044 plasmid pK2044, complete sequence 206990-207021 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP026024 Klebsiella pneumoniae strain 11420 plasmid p11420-HVKP, complete sequence 17614-17645 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_AP019549 Klebsiella pneumoniae strain THC11 plasmid pTHC11-1, complete sequence 93082-93113 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_LR792629 Klebsiella pneumoniae isolate SB5881 plasmid SB5881_II 24877-24908 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP041024 Klebsiella pneumoniae strain KP1692 plasmid pKP1692, complete sequence 28458-28489 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 CP052259 Klebsiella pneumoniae strain E16KP0290 plasmid pE16KP0290-1, complete sequence 29067-29098 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP054064 Klebsiella pneumoniae strain WSHvKP plasmid pSWHvKp, complete sequence 102017-102048 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP026587 Klebsiella pneumoniae strain NUHL30457 plasmid p1, complete sequence 207358-207389 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_LR745046 Klebsiella pneumoniae isolate Kpn2166 plasmid pVIR_Kpn2166 24995-25026 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_LR745043 Klebsiella pneumoniae isolate Klebsiella pneumoniae kpn154 plasmid pVIR_Kpn154 55881-55912 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 CP052495 Klebsiella pneumoniae strain B17KP0067 plasmid pB17KP0067-1, complete sequence 118783-118814 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_MK715436 Klebsiella pneumoniae subsp. pneumoniae strain SCNJ1 plasmid pVir-SCNJ1, complete sequence 120528-120559 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_MN058044 Klebsiella pneumoniae strain KP1677 plasmid pKP1677, complete sequence 79700-79731 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NC_017541 Klebsiella pneumoniae KCTC 2242 plasmid pKCTC2242, complete sequence 186225-186256 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP032356 Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_Vir, complete sequence 100412-100443 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_MH255828 Klebsiella pneumoniae subsp. pneumoniae strain SH9 plasmid pSH9-VIR, complete sequence 60079-60110 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_MF398271 Klebsiella pneumoniae subsp. pneumoniae strain 70-2 plasmid pKP70-2, complete sequence 126757-126788 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_CP016815 Klebsiella pneumoniae strain ED23 plasmid unamed, complete sequence 17044-17075 9 0.719
NC_015161_1 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385237-385268 32 NZ_MG053312 Klebsiella pneumoniae strain KP267 plasmid pVir-CR-HvKP267, complete sequence 229290-229321 9 0.719
NC_015161_1 1.4|385298|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385298-385329 32 NZ_CP025513 Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence 668354-668385 9 0.719
NC_015161_1 1.4|385298|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT 385298-385329 32 MH616766 Microviridae sp. isolate ctba71, complete genome 4132-4163 10 0.688

1. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.812

ggcgccgctggccgctttgccgc-tctgcgcac	CRISPR spacer
ggcgccgctggccgcgctgccgcgtccgcggt-	Protospacer
*************** .****** **.***   

2. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.812

ggcgccgctggccgctttgccgc-tctgcgcac	CRISPR spacer
ggcgccgctggccgcgctgccgcgtccgcggt-	Protospacer
*************** .****** **.***   

3. spacer 1.1|385115|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to MG945797 (UNVERIFIED: Microviridae sp. isolate 4494-1801, complete genome) position: , mismatch: 8, identity: 0.75

gtgattccgaagtagtcagacagcgaaacgag	CRISPR spacer
gggatgccgaagtagtcagccagcgttcctac	Protospacer
* *** ************* *****   * * 

4. spacer 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 8, identity: 0.75

cgcctcccacatcgaagagttgctggcccgca	CRISPR spacer
gccgatcaacatcgacgagttgcgggcccgca	Protospacer
  *  .* ******* ******* ********

5. spacer 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to LR606150 (Rhizobium sp. Q54 genome assembly, plasmid: 7) position: , mismatch: 8, identity: 0.75

cgcctcccacatcgaagagttgctggcccgca	CRISPR spacer
gccgatcaacatcgacgagttgcgggcccgca	Protospacer
  *  .* ******* ******* ********

6. spacer 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049906 (Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcctcccacatcgaagagttgctggcccgca	CRISPR spacer
gcccttccacatcgaagagttgcgggtcaggg	Protospacer
  ***.***************** **.* * .

7. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046321 (Gordonia bronchialis strain FDAARGOS_676 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
ggcgccgctggccgcgttcccgcacctccacc	Protospacer
*************** ** **** *. *   *

8. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NC_013442 (Gordonia bronchialis DSM 43247 plasmid pGBRO01, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
ggcgccgctggccgcgttcccgcacctccacc	Protospacer
*************** ** **** *. *   *

9. spacer 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NC_014213 (Meiothermus silvanus DSM 9946 plasmid pMESIL01, complete sequence) position: , mismatch: 9, identity: 0.719

cgcctcccacatcgaagagttgctggcccgca	CRISPR spacer
caaaacccacatcgaggagttgctggccaaac	Protospacer
*.   **********.************ .  

10. spacer 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 9, identity: 0.719

cgcctcccacatcgaagagttgctggcccgca	CRISPR spacer
ctttgcccacatcgaagagtcactggccgcga	Protospacer
* .. ***************..******   *

11. spacer 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 9, identity: 0.719

cgcctcccacatcgaagagttgctggcccgca	CRISPR spacer
ctttgcccacatcgaagagtcactggccgcga	Protospacer
* .. ***************..******   *

12. spacer 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

cgcctcccacatcgaagagttgctggcccgca	CRISPR spacer
ctttgcccacatcgaagagtcactggccgcga	Protospacer
* .. ***************..******   *

13. spacer 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

cgcctcccacatcgaagagttgctggcccgca	CRISPR spacer
ctttgcccacatcgaagagtcactggccgcga	Protospacer
* .. ***************..******   *

14. spacer 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

cgcctcccacatcgaagagttgctggcccgca	CRISPR spacer
ctttgcccacatcgaagagtcactggccgcga	Protospacer
* .. ***************..******   *

15. spacer 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

cgcctcccacatcgaagagttgctggcccgca	CRISPR spacer
ctttgcccacatcgaagagtcactggccgcga	Protospacer
* .. ***************..******   *

16. spacer 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

cgcctcccacatcgaagagttgctggcccgca	CRISPR spacer
ctttgcccacatcgaagagtcactggccgcga	Protospacer
* .. ***************..******   *

17. spacer 1.2|385176|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

cgcctcccacatcgaagagttgctggcccgca	CRISPR spacer
ctttgcccacatcgaagagtcactggccgcga	Protospacer
* .. ***************..******   *

18. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025081 (Klebsiella pneumoniae strain SGH10 plasmid pSGH10, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

19. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031258 (Klebsiella quasipneumoniae strain L22 plasmid pL22-1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

20. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to CP052163 (Klebsiella pneumoniae strain F16KP0082 plasmid pF16KP0082-1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

21. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030924 (Klebsiella pneumoniae subsp. pneumoniae strain KC-Pl-HB1 plasmid pKC-Pl-HB1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

22. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026022 (Klebsiella pneumoniae strain 11492 plasmid p11492-CTXM, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

23. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014011 (Klebsiella pneumoniae subsp. pneumoniae strain RJF999 plasmid pRJF999, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

24. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037743 (Klebsiella pneumoniae strain ST23 plasmid pDHQP1701672_hv, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

25. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to CP052159 (Klebsiella pneumoniae strain F16KP0084 plasmid pF16KP0084-1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

26. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to MN200128 (Klebsiella pneumoniae strain 17ZR-91 plasmid p17ZR-91-Vir-RC, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

27. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to MN200130 (Escherichia coli strain EC600 plasmid p17ZR-91-TC1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

28. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to MN543581 (Klebsiella pneumoniae strain PM48TC plasmid pPM48TC_fusion, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

29. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to MN543585 (Klebsiella pneumoniae strain GH27TC plasmid pGH27TC_fusion, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

30. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to MN543575 (Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_fusion, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

31. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to MN543576 (Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_vir, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

32. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to CP052144 (Klebsiella pneumoniae strain F17KP0012 plasmid pF17KP0012-1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

33. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to CP052363 (Klebsiella pneumoniae strain D16KP0122 plasmid pD16KP0122-1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

34. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019049 (Klebsiella pneumoniae subsp. pneumoniae strain RJA166 plasmid pRJA166b, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

35. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024708 (Klebsiella pneumoniae strain cr-hvkp3 plasmid pPUTH1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

36. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034776 (Klebsiella pneumoniae strain 18CPO060 plasmid phvKP060, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

37. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to CP052357 (Klebsiella pneumoniae strain D16KP0144 plasmid pD16KP0144-1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

38. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134257 (Klebsiella aerogenes strain NCTC9644 plasmid 4, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

39. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027063 (Klebsiella variicola strain WCHKV030666 plasmid pVir_030666, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

40. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to CP052445 (Klebsiella pneumoniae strain C16KP0098 plasmid pC16KP0098-2, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

41. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_FO834905 (Klebsiella pneumoniae strain Kp52.145 plasmid II, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

42. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014009 (Klebsiella pneumoniae subsp. pneumoniae strain RJF293 plasmid pRJF293, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

43. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006989 (Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
ccggccgccggccgctttgccgatctcctggc	Protospacer
   *****.************* *** *  .*

44. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to LR134211 (Klebsiella aerogenes strain NCTC418 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

45. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NC_005249 (Klebsiella pneumoniae CG43 plasmid pLVPK, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

46. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036191 (Klebsiella pneumoniae strain BA34918 plasmid pvirulence_VBA34918, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

47. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NC_006625 (Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 plasmid pK2044, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

48. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019161 (Klebsiella pneumoniae strain GN-2 plasmid pGN-2, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

49. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to CP052563 (Klebsiella pneumoniae strain A16KP0135 plasmid pA16KP0135-1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

50. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019666 (Klebsiella pneumoniae strain TA6363 plasmid pTMTA63631, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

51. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035906 (Klebsiella pneumoniae strain BA4656 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

52. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to MF943217 (Klebsiella pneumoniae strain WCHKP13F2 plasmid pVir_WCHKP13F2, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

53. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to CP052190 (Klebsiella pneumoniae strain F16KP0019 plasmid pF16KP0019-1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

54. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030270 (Klebsiella pneumoniae subsp. pneumoniae strain SC-7 plasmid pSC7-vir, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

55. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035384 (Klebsiella pneumoniae strain AP8555 plasmid pAP855, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

56. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023723 (Klebsiella pneumoniae strain TVGHCRE225 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

57. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047678 (Klebsiella pneumoniae subsp. pneumoniae strain KUH-KPNHVF1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

58. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026166 (Klebsiella pneumoniae strain F81 plasmid pF81_2, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

59. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047676 (Klebsiella pneumoniae subsp. pneumoniae strain KUH-KPNHVL1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

60. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to CP052304 (Klebsiella pneumoniae strain E16KP0172 plasmid pE16KP0172-1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

61. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052037 (Klebsiella pneumoniae strain KPN41053 plasmid pKPN41953, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

62. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to CP052204 (Klebsiella pneumoniae strain F16KP0002 plasmid pF16KP0002-1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

63. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to CP023135 (Klebsiella pneumoniae subsp. pneumoniae strain KpvK54 plasmid pKpvK54, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

64. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to CP007642 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803a, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
ccggccgccggccgctttgccgatctcctggc	Protospacer
   *****.************* *** *  .*

65. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to CP052178 (Klebsiella pneumoniae strain F16KP0045 plasmid pF16KP0045-1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

66. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028390 (Klebsiella pneumoniae strain WCHKP13F2 plasmid pVir_095132, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

67. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045692 (Klebsiella pneumoniae strain TK421 plasmid pTK421_2, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

68. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034083 (Klebsiella pneumoniae subsp. pneumoniae strain R210-2 plasmid pR210-2-vir, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

69. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042975 (Klebsiella pneumoniae strain KPN55602 plasmid pK55602_1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

70. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026012 (Klebsiella pneumoniae strain K2044 plasmid pK2044, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

71. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026024 (Klebsiella pneumoniae strain 11420 plasmid p11420-HVKP, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

72. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019549 (Klebsiella pneumoniae strain THC11 plasmid pTHC11-1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

73. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR792629 (Klebsiella pneumoniae isolate SB5881 plasmid SB5881_II) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

74. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041024 (Klebsiella pneumoniae strain KP1692 plasmid pKP1692, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

75. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to CP052259 (Klebsiella pneumoniae strain E16KP0290 plasmid pE16KP0290-1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

76. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054064 (Klebsiella pneumoniae strain WSHvKP plasmid pSWHvKp, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

77. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026587 (Klebsiella pneumoniae strain NUHL30457 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

78. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR745046 (Klebsiella pneumoniae isolate Kpn2166 plasmid pVIR_Kpn2166) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

79. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR745043 (Klebsiella pneumoniae isolate Klebsiella pneumoniae kpn154 plasmid pVIR_Kpn154) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

80. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to CP052495 (Klebsiella pneumoniae strain B17KP0067 plasmid pB17KP0067-1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

81. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK715436 (Klebsiella pneumoniae subsp. pneumoniae strain SCNJ1 plasmid pVir-SCNJ1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

82. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN058044 (Klebsiella pneumoniae strain KP1677 plasmid pKP1677, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

83. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NC_017541 (Klebsiella pneumoniae KCTC 2242 plasmid pKCTC2242, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

84. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032356 (Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_Vir, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

85. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH255828 (Klebsiella pneumoniae subsp. pneumoniae strain SH9 plasmid pSH9-VIR, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

86. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF398271 (Klebsiella pneumoniae subsp. pneumoniae strain 70-2 plasmid pKP70-2, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

87. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016815 (Klebsiella pneumoniae strain ED23 plasmid unamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

88. spacer 1.3|385237|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG053312 (Klebsiella pneumoniae strain KP267 plasmid pVir-CR-HvKP267, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgccgctggccgctttgccgctctgcgcac	CRISPR spacer
caggccggaggccgctttgccgctctccccgg	Protospacer
 . ****  ***************** * *. 

89. spacer 1.4|385298|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025513 (Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

aaattcttcccgaaaaaagccgactgggacag	CRISPR spacer
aaaatcttcccgaaaaaagcggaaggtcgctt	Protospacer
*** **************** **  *  .*  

90. spacer 1.4|385298|32|NC_015161|PILER-CR,CRISPRCasFinder,CRT matches to MH616766 (Microviridae sp. isolate ctba71, complete genome) position: , mismatch: 10, identity: 0.688

aaattcttcccgaaaaaagccgactgggacag	CRISPR spacer
gaattcttccctaaaaaaggcgaccttttaaa	Protospacer
.********** ******* ****.     *.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1704512 : 1711893 7 Staphylococcus_phage(66.67%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
5. NC_015163
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015163_1 46414-46666 Orphan NA
4 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_015163_1 1.1|46435|46|NC_015163|CRT 46435-46480 46 NC_015163 Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence 46435-46480 0 1.0
NC_015163_1 1.2|46502|34|NC_015163|CRT 46502-46535 34 NC_015163 Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence 46502-46535 0 1.0
NC_015163_1 1.3|46557|34|NC_015163|CRT 46557-46590 34 NC_015163 Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence 46557-46590 0 1.0
NC_015163_1 1.4|46612|34|NC_015163|CRT 46612-46645 34 NC_015163 Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence 46612-46645 0 1.0
NC_015163_1 1.4|46612|34|NC_015163|CRT 46612-46645 34 NC_015163 Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence 46402-46435 2 0.941
NC_015163_1 1.3|46557|34|NC_015163|CRT 46557-46590 34 NC_015163 Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence 46479-46512 3 0.912
NC_015163_1 1.2|46502|34|NC_015163|CRT 46502-46535 34 NC_015163 Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence 46548-46581 7 0.794
NC_015163_1 1.3|46557|34|NC_015163|CRT 46557-46590 34 NC_015163 Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence 46511-46544 8 0.765

1. spacer 1.1|46435|46|NC_015163|CRT matches to NC_015163 (Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence) position: , mismatch: 0, identity: 1.0

cggccgatttatcgacgacatagttgagcgattgtgctttctctgc	CRISPR spacer
cggccgatttatcgacgacatagttgagcgattgtgctttctctgc	Protospacer
**********************************************

2. spacer 1.2|46502|34|NC_015163|CRT matches to NC_015163 (Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence) position: , mismatch: 0, identity: 1.0

cgggggtagggccacgacatagttgagcgattct	CRISPR spacer
cgggggtagggccacgacatagttgagcgattct	Protospacer
**********************************

3. spacer 1.3|46557|34|NC_015163|CRT matches to NC_015163 (Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence) position: , mismatch: 0, identity: 1.0

ggccacgacatagttgagcgattcgggggtaagg	CRISPR spacer
ggccacgacatagttgagcgattcgggggtaagg	Protospacer
**********************************

4. spacer 1.4|46612|34|NC_015163|CRT matches to NC_015163 (Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence) position: , mismatch: 0, identity: 1.0

tggcccctccaccgacgacatagtcgagcgatta	CRISPR spacer
tggcccctccaccgacgacatagtcgagcgatta	Protospacer
**********************************

5. spacer 1.4|46612|34|NC_015163|CRT matches to NC_015163 (Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence) position: , mismatch: 2, identity: 0.941

tggcccctccaccgacgacatagtcgagcgatta	CRISPR spacer
tggcccctccaccgacgacatagttgagcgattc	Protospacer
************************.******** 

6. spacer 1.3|46557|34|NC_015163|CRT matches to NC_015163 (Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence) position: , mismatch: 3, identity: 0.912

ggccacgacatagttgagcgattcgggggtaagg	CRISPR spacer
gccgacgacatagttgagcgattcgggggtaggg	Protospacer
* * ***************************.**

7. spacer 1.2|46502|34|NC_015163|CRT matches to NC_015163 (Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence) position: , mismatch: 7, identity: 0.794

cgggggtagggccacgacatagttgagcgattct	CRISPR spacer
tgagcgattggccacgacatagttgagcgattcg	Protospacer
.*.* *   ************************ 

8. spacer 1.3|46557|34|NC_015163|CRT matches to NC_015163 (Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence) position: , mismatch: 8, identity: 0.765

ggccacgacatagttgagcgattcgggggtaagg	CRISPR spacer
ggccacgacatagttgagcgattctcgacgacat	Protospacer
************************  *.  * . 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 7362 : 66669 45 Bacillus_phage(21.05%) transposase,protease,integrase attL 34831:34868|attR 65458:65495
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage