CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_015224	Yersinia enterocolitica subsp. palearctica 105.5R(r), complete sequence	0 crisprs	DEDDh,DinG,cas3,csa3	0	0	6	0
NC_015475	Yersinia enterocolitica subsp. palearctica 105.5R(r) plasmid 105.5R(r)p, complete sequence	0 crisprs	csa3	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1049504 : 1058724

Bacillus_phage(16.67%)

transposase,tRNA,integrase

attL 1052123:1052138|attR 1063584:1063599

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013649343.1\|1049504_1051238_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	2.8e-64	29.7
WP_020282590.1\|1051683_1052781_+	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	5.4e-05	39.0
1052123:1052138	attL	NA	NA	NA	NA
WP_013649344.1\|1052791_1054309_+\|tRNA	lysine--tRNA ligase	A0A2K9L3L6	Tupanvirus	2.3e-86	37.6
WP_013649345.1\|1054642_1056520_+\|integrase	site-specific integrase	A0A059XK29	uncultured_phage	7.3e-10	25.5
WP_013649170.1\|1056503_1057229_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	4.4e-32	33.3
WP_005180650.1\|1057215_1058724_-\|transposase	IS21-like element ISYen2A family transposase	A0A2L1IVA1	Escherichia_phage	1.1e-21	31.2
1063584:1063599	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1579690 : 1625122

uncultured_Caudovirales_phage(32.26%)

lysis,head,protease,tail,integrase,terminase

attL 1566992:1567008|attR 1601221:1601237

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1566992:1567008	attL	NA	NA	NA	NA
WP_013649517.1\|1579690_1580509_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_005158980.1\|1580704_1582198_-	molybdate ABC transporter ATP-binding protein ModF	A0A1M7XV31	Cedratvirus	9.8e-10	27.5
WP_013649518.1\|1582306_1583098_-	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA
WP_005158974.1\|1583332_1583473_+	multidrug efflux pump-associated protein, AcrZ family	NA	NA	NA	NA
WP_013649519.1\|1583689_1584466_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_013649520.1\|1584641_1585835_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	8.5e-73	39.7
WP_013649521.1\|1585800_1586001_-	AlpA family phage regulatory protein	A0A0R6PC61	Moraxella_phage	8.2e-05	45.3
WP_041852714.1\|1585997_1587398_-	DEAD/DEAH box helicase	Q3LZN8	Bacteriophage	2.2e-197	70.6
WP_013649523.1\|1587441_1587936_+	hypothetical protein	NA	NA	NA	NA
WP_013649524.1\|1587937_1588210_-	VRR-NUC domain-containing protein	Q3LZN4	Bacteriophage	7.0e-31	74.4
WP_013649525.1\|1588199_1588424_-	ANR family transcriptional regulator	NA	NA	NA	NA
WP_032904657.1\|1588428_1590528_-	DNA polymerase I	Q775A3	Bordetella_phage	5.4e-264	65.0
WP_013649527.1\|1590624_1591404_-	DUF2303 family protein	A0A291AUR3	Sinorhizobium_phage	6.0e-19	30.8
WP_013649528.1\|1591460_1591838_-	hypothetical protein	A0A142K8T9	Gordonia_phage	4.4e-07	45.7
WP_013649529.1\|1591893_1592442_-	DUF2815 family protein	Q3LZQ2	Bacteriophage	1.4e-54	59.0
WP_013649530.1\|1592454_1593765_-	DUF2800 domain-containing protein	B6SCX9	Bacteriophage	1.5e-126	54.1
WP_013649531.1\|1593767_1594502_-	hypothetical protein	NA	NA	NA	NA
WP_013649532.1\|1595013_1595691_-	helix-turn-helix transcriptional regulator	B6SCU0	Bacteriophage	1.9e-53	47.3
WP_013649533.1\|1595831_1596032_+	transcriptional regulator	K7RWG7	Bacteriophage	3.4e-11	62.5
WP_013649534.1\|1596035_1598201_+	bifunctional DNA primase/polymerase	B6SD37	Bacteriophage	3.8e-164	67.4
WP_013649535.1\|1598531_1598768_+	transcriptional regulator	NA	NA	NA	NA
WP_013649536.1\|1599040_1599454_+	hypothetical protein	NA	NA	NA	NA
WP_013649537.1\|1599464_1599683_+	hypothetical protein	NA	NA	NA	NA
WP_013649538.1\|1599685_1601290_+\|head,tail	head-tail connector protein	A0A2H4J3N6	uncultured_Caudovirales_phage	1.5e-176	60.9
1601221:1601237	attR	NA	NA	NA	NA
WP_144405301.1\|1601295_1601526_+	hypothetical protein	NA	NA	NA	NA
WP_013649540.1\|1601512_1602316_+	hypothetical protein	A0A2H4JEQ5	uncultured_Caudovirales_phage	8.9e-50	44.5
WP_013649541.1\|1602529_1603438_+	hypothetical protein	A0A2H4JC66	uncultured_Caudovirales_phage	8.3e-44	38.1
WP_013649542.1\|1603492_1604053_+	hypothetical protein	A0A2H4JID6	uncultured_Caudovirales_phage	4.0e-49	51.3
WP_013649543.1\|1604052_1606026_+	hypothetical protein	A0A2H4J6H2	uncultured_Caudovirales_phage	2.8e-182	48.2
WP_013649544.1\|1606031_1606478_+	GNAT family N-acetyltransferase	A0A2H4J9Z5	uncultured_Caudovirales_phage	6.7e-23	41.2
WP_013649545.1\|1606481_1606964_+	hypothetical protein	A0A2H4J679	uncultured_Caudovirales_phage	2.7e-09	48.0
WP_013649546.1\|1606960_1609087_+	hypothetical protein	A0A2H4JE92	uncultured_Caudovirales_phage	1.1e-59	27.0
WP_013649547.1\|1609092_1610385_+	hypothetical protein	A0A0F6TJQ3	Escherichia_coli_O157_typing_phage	3.0e-31	35.8
WP_013649548.1\|1610381_1612907_+	hypothetical protein	A0A193GZ61	Enterobacter_phage	1.6e-185	42.7
WP_032904658.1\|1612908_1613316_-	hypothetical protein	NA	NA	NA	NA
WP_013649550.1\|1613327_1614038_-	hypothetical protein	NA	NA	NA	NA
WP_013649551.1\|1614079_1614430_+	hypothetical protein	A0A2H4J7H0	uncultured_Caudovirales_phage	1.6e-19	47.3
WP_013649552.1\|1614426_1616037_+\|terminase	phage terminase large subunit	A0A2H4JCA3	uncultured_Caudovirales_phage	3.1e-227	69.5
WP_013649553.1\|1616049_1617447_+\|tail	tail fiber	T1S9Y2	Salmonella_phage	3.6e-38	35.4
WP_013649554.1\|1617457_1617925_+\|tail	tail fiber assembly protein	NA	NA	NA	NA
WP_032904659.1\|1618036_1618342_+	hypothetical protein	H6WRZ3	Salmonella_phage	7.3e-21	54.5
WP_013649556.1\|1618328_1618859_+	lysozyme	Q7Y3V3	Yersinia_phage	4.0e-67	70.9
WP_013649557.1\|1618851_1619352_+\|lysis	lysis protein	A0A0A0YR13	Escherichia_phage	1.4e-24	41.1
WP_013649558.1\|1619491_1620190_+	molybdate ABC transporter permease subunit	NA	NA	NA	NA
WP_013649559.1\|1620183_1621248_+	molybdenum ABC transporter ATP-binding protein ModC	G9BWD6	Planktothrix_phage	1.2e-20	33.8
WP_005158965.1\|1621490_1622312_-	pyridoxal phosphatase	NA	NA	NA	NA
WP_013649560.1\|1622725_1623727_+	6-phosphogluconolactonase	NA	NA	NA	NA
WP_005158960.1\|1623844_1625122_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	4.2e-17	33.2

DBSCAN-SWA_3

1767479 : 1778325

Bacillus_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005162367.1\|1767479_1769066_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	6.3e-39	44.1
WP_020283358.1\|1769547_1770966_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	7.6e-52	30.0
WP_020283357.1\|1770979_1772365_+	phosphomannomutase ManB protein	A0A127AWJ1	Bacillus_phage	1.3e-32	26.8
WP_013649617.1\|1772519_1773410_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	4.9e-57	46.3
WP_013649618.1\|1773475_1774369_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	9.9e-50	42.5
WP_013649619.1\|1774512_1775634_+	GDP-mannose 4,6-dehydratase	M1HAR7	Acanthocystis_turfacea_Chlorella_virus	1.1e-133	63.6
WP_162467783.1\|1775646_1776735_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A2K9L470	Tupanvirus	7.3e-47	39.5
WP_013649621.1\|1776790_1777573_+	ABC transporter permease	NA	NA	NA	NA
WP_013649622.1\|1777569_1778325_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.7e-13	30.5

DBSCAN-SWA_4

1961409 : 1974074

Vaccinia_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013649690.1\|1961409_1964562_-	beta-galactosidase	B9U1H7	Vaccinia_virus	0.0e+00	62.8
WP_013649691.1\|1964740_1965775_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	1.4e-84	50.3
WP_002210893.1\|1966256_1966469_+	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	2.0e-25	80.0
WP_004701013.1\|1966722_1966914_+	protein DsrB	NA	NA	NA	NA
WP_013649692.1\|1967047_1968787_-	Tar ligand binding domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.1e-09	30.4
WP_005177865.1\|1969034_1969406_-	hypothetical protein	NA	NA	NA	NA
WP_005177868.1\|1969653_1969893_-	hypothetical protein	NA	NA	NA	NA
WP_005177870.1\|1970456_1971155_+	MgtC family protein	G3MA03	Bacillus_virus	1.1e-14	41.0
WP_005164503.1\|1971371_1974074_+	magnesium-translocating P-type ATPase	M1HM40	Paramecium_bursaria_Chlorella_virus	2.7e-42	25.2

DBSCAN-SWA_5

2023269 : 2120930

Salmonella_phage(24.14%)

lysis,transposase,tail,integrase,plate,tRNA,capsid,holin

attL 2023146:2023164|attR 2026184:2026202

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2023146:2023164	attL	NA	NA	NA	NA
WP_071822707.1\|2023269_2023425_-\|integrase	integrase	Q8W658	Enterobacteria_phage	1.0e-07	83.8
WP_013649708.1\|2024220_2024616_-	hypothetical protein	NA	NA	NA	NA
WP_032904696.1\|2024648_2024882_-	hypothetical protein	NA	NA	NA	NA
WP_005160362.1\|2025618_2025888_-	hypothetical protein	NA	NA	NA	NA
WP_005160360.1\|2026202_2026805_-	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA
2026184:2026202	attR	NA	NA	NA	NA
WP_005160358.1\|2026891_2029852_-	metal-dependent phosphohydrolase	NA	NA	NA	NA
WP_020283291.1\|2030182_2031052_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_005160355.1\|2031325_2031688_-	flagella biosynthesis regulatory protein FliT	NA	NA	NA	NA
WP_005160351.1\|2031699_2032098_-	flagellar export chaperone FliS	NA	NA	NA	NA
WP_013649711.1\|2032108_2033509_-	flagellar filament capping protein FliD	NA	NA	NA	NA
WP_013649712.1\|2033777_2034887_+	flagellin FliC	NA	NA	NA	NA
WP_013649713.1\|2035076_2036186_+	flagellin FliC	NA	NA	NA	NA
WP_005160347.1\|2036375_2037521_+	FliC/FljB family flagellin	NA	NA	NA	NA
WP_005160345.1\|2037668_2038874_+	flagellin lysine-N-methylase	NA	NA	NA	NA
WP_005160341.1\|2039064_2039787_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA
WP_005160338.1\|2039842_2040352_+	flagella biosynthesis regulatory protein FliZ	NA	NA	NA	NA
WP_013649714.1\|2040730_2041723_+	D-cysteine desulfhydrase	NA	NA	NA	NA
WP_013649715.1\|2041841_2042642_+	cystine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_013649716.1\|2042641_2043304_+	cystine ABC transporter permease	NA	NA	NA	NA
WP_005160316.1\|2043306_2044062_+	L-cystine ABC transporter ATP-binding protein YecC	W8CYL7	Bacillus_phage	1.5e-14	33.7
WP_005160301.1\|2044133_2044505_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_013649717.1\|2044504_2044798_-	hypothetical protein	NA	NA	NA	NA
WP_013649718.1\|2045097_2049087_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_013649719.1\|2049612_2051097_+	sodium/proline symporter PutP	NA	NA	NA	NA
WP_005160269.1\|2051261_2051591_-	hypothetical protein	NA	NA	NA	NA
WP_005160265.1\|2051594_2052662_-	hypothetical protein	NA	NA	NA	NA
WP_005177992.1\|2053452_2054313_+	FTR1 family protein	NA	NA	NA	NA
WP_013649720.1\|2054329_2055460_+	iron uptake system protein EfeO	NA	NA	NA	NA
WP_013649721.1\|2055468_2056770_+	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA
WP_005160258.1\|2056971_2057571_-	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA
WP_013649722.1\|2057740_2058223_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_005160254.1\|2058556_2059735_+	N-acetylneuraminate epimerase	NA	NA	NA	NA
WP_005178006.1\|2061352_2061901_-	pyrimidine utilization flavin reductase protein F	Q9KX93	Enterobacteria_phage	1.9e-27	64.5
WP_013649723.1\|2061950_2062541_-	malonic semialdehyde reductase	NA	NA	NA	NA
WP_013649724.1\|2062552_2063389_-	pyrimidine utilization protein D	NA	NA	NA	NA
WP_005169991.1\|2063421_2063808_-	pyrimidine utilization protein C	NA	NA	NA	NA
WP_072077028.1\|2063857_2064550_-	pyrimidine utilization protein B	NA	NA	NA	NA
WP_042663910.1\|2065200_2065869_+	HTH-type transcriptional regulator RutR	NA	NA	NA	NA
WP_014609041.1\|2065926_2067348_-	D-serine/D-alanine/glycine transporter	NA	NA	NA	NA
WP_013649730.1\|2069430_2070165_-	class I SAM-dependent methyltransferase	A0A1X9I6N4	Streptococcus_phage	1.8e-49	40.3
WP_005160202.1\|2070568_2071066_+	hypothetical protein	NA	NA	NA	NA
WP_005160200.1\|2071147_2071477_-	DHCW motif cupin fold protein	NA	NA	NA	NA
WP_013649731.1\|2071621_2073121_+	alpha-amylase	NA	NA	NA	NA
WP_013649732.1\|2073372_2073627_+	hypothetical protein	NA	NA	NA	NA
WP_005160193.1\|2073657_2073996_-	GlpM family protein	NA	NA	NA	NA
WP_005160184.1\|2074106_2074331_-	DUF2594 family protein	NA	NA	NA	NA
WP_005160181.1\|2075024_2075681_+	UvrY/SirA/GacA family response regulator transcription factor	NA	NA	NA	NA
WP_005160178.1\|2075673_2077506_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_005160174.1\|2077564_2078113_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_013649733.1\|2078777_2078993_-	ogr/Delta-like zinc finger family protein	S4TNZ3	Salmonella_phage	1.1e-18	60.6
WP_032904244.1\|2079302_2080322_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_004705491.1\|2084318_2084438_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_080366163.1\|2084452_2084731_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	5.3e-18	53.6
WP_013649736.1\|2084876_2085392_-\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	2.5e-61	68.0
WP_013649737.1\|2085403_2086579_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	5.1e-179	79.6
WP_013649738.1\|2086888_2087074_-	hypothetical protein	NA	NA	NA	NA
WP_072077075.1\|2087637_2088522_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	5.7e-74	46.3
WP_013649740.1\|2088727_2088904_-	hypothetical protein	NA	NA	NA	NA
WP_013649741.1\|2089345_2089666_-	hypothetical protein	NA	NA	NA	NA
WP_013649742.1\|2089655_2089862_-	hypothetical protein	NA	NA	NA	NA
WP_005161469.1\|2090003_2090171_+	hypothetical protein	A0A2H4JB52	uncultured_Caudovirales_phage	1.2e-06	48.0
WP_005161466.1\|2090242_2090503_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_013649743.1\|2090509_2090788_+	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA	NA	NA	NA
WP_013649744.1\|2091452_2092745_-\|tail	phage tail protein	M1TAS6	Escherichia_phage	1.8e-47	35.6
WP_013649745.1\|2092717_2092999_-\|tail	phage tail protein	F1BUP1	Erwinia_phage	1.4e-31	72.5
WP_013649746.1\|2092991_2093537_-\|tail	phage tail protein I	F1BUP2	Erwinia_phage	3.3e-80	77.7
WP_013649747.1\|2093529_2094438_-\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	3.8e-121	74.2
WP_005161449.1\|2094437_2094794_-	GPW/gp25 family protein	F1BUP4	Erwinia_phage	4.4e-33	60.0
WP_013649748.1\|2094790_2095426_-\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	4.9e-67	62.4
WP_005161438.1\|2095562_2095835_+	BrnT family toxin	NA	NA	NA	NA
WP_005161435.1\|2095815_2096106_+	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	8.3e-06	34.5
WP_005161434.1\|2096171_2097233_+	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA
WP_005161432.1\|2097271_2097718_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	9.4e-33	48.0
WP_013649749.1\|2097714_2098182_-\|tail	phage tail protein	F1BUP9	Erwinia_phage	3.7e-40	55.9
WP_013649750.1\|2098283_2098709_-\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	2.8e-18	43.0
WP_013649751.1\|2098712_2099108_-	M15 family metallopeptidase	A9DET4	Yersinia_phage	5.9e-47	71.0
WP_013649752.1\|2099094_2099274_-\|holin	holin	NA	NA	NA	NA
WP_071822708.1\|2099258_2099570_-\|capsid	P2 family phage major capsid protein	A0A077KEQ8	Ralstonia_phage	2.7e-26	62.4
WP_005176946.1\|2101255_2102458_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.5e-77	72.0
WP_005161398.1\|2103113_2104031_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_013649756.1\|2104632_2105052_-	helix-turn-helix domain-containing protein	A0A0M4REM4	Salmonella_phage	9.8e-16	31.1
WP_005161394.1\|2105452_2106097_+	CatB-related O-acetyltransferase	M1HKK6	Paramecium_bursaria_Chlorella_virus	8.0e-17	31.3
WP_013649757.1\|2106841_2107261_+	antitermination protein Q	K7PGW2	Enterobacterial_phage	1.3e-39	63.9
WP_005161372.1\|2107437_2107614_-	GhoT/OrtT family toxin	NA	NA	NA	NA
WP_005161370.1\|2107840_2108017_+\|holin	phage holin family protein	B6SD15	Bacteriophage	2.2e-14	60.7
WP_032904719.1\|2108018_2108501_+	lysozyme	A0A2H4JCH1	uncultured_Caudovirales_phage	2.1e-54	63.8
WP_005161363.1\|2108873_2109758_+	triacylglycerol lipase	NA	NA	NA	NA
WP_005161358.1\|2110059_2110716_+	DUF533 domain-containing protein	NA	NA	NA	NA
WP_013649759.1\|2110822_2111707_-	LysR family transcriptional regulator AmpR	NA	NA	NA	NA
WP_013649760.1\|2111841_2113008_+	class C beta-lactamase	NA	NA	NA	NA
WP_013649761.1\|2113154_2114246_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_005161346.1\|2114513_2114972_+	hypothetical protein	NA	NA	NA	NA
WP_013649762.1\|2115026_2115620_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_005161340.1\|2115951_2116224_+	stress-induced protein YchH	NA	NA	NA	NA
WP_004390739.1\|2116710_2117658_-	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	2.7e-45	38.2
WP_013649763.1\|2117855_2118737_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_013649764.1\|2118738_2119362_-	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_013649765.1\|2119667_2120930_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA

DBSCAN-SWA_6

2193685 : 2257143

Bacillus_virus(20.0%)

coat,transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013649793.1\|2193685_2195482_+\|tRNA	aspartate--tRNA ligase	A0A1V0SAC0	Catovirus	3.8e-08	26.0
WP_005178749.1\|2195569_2196052_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_005165984.1\|2196078_2196822_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_005163071.1\|2197186_2197708_+	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	6.5e-09	32.4
WP_013649794.1\|2197830_2198448_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_005163065.1\|2198483_2199488_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	8.1e-08	27.3
WP_013649795.1\|2199538_2201020_-	dipeptide/tripeptide permease DtpB	NA	NA	NA	NA
WP_005163061.1\|2201286_2202072_-	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_005163059.1\|2202068_2202827_-	zinc ABC transporter ATP-binding protein ZnuC	G3M9Y6	Bacillus_virus	4.2e-17	29.8
WP_013649796.1\|2202902_2203865_+	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_032904209.1\|2203879_2205196_+	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	1.4e-15	41.7
WP_005163051.1\|2205279_2206245_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_041852717.1\|2206787_2207003_+	hypothetical protein	NA	NA	NA	NA
WP_013649798.1\|2207133_2208048_+	hypothetical protein	NA	NA	NA	NA
WP_005177551.1\|2208161_2209364_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.5e-77	72.0
WP_005169197.1\|2209507_2210950_-	pyruvate kinase	NA	NA	NA	NA
WP_005163035.1\|2211169_2212039_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_005163030.1\|2212391_2213876_+	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	3.4e-79	36.6
WP_005163029.1\|2214181_2214823_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_005163026.1\|2215507_2215885_+	multidrug/spermidine efflux SMR transporter subunit MdtJ	NA	NA	NA	NA
WP_005163022.1\|2215871_2216201_+	multidrug/spermidine efflux SMR transporter subunit MdtI	NA	NA	NA	NA
WP_005163018.1\|2216362_2216707_-	RidA family protein	NA	NA	NA	NA
WP_013649799.1\|2216835_2218740_+	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	4.2e-90	32.1
WP_020283226.1\|2218814_2219513_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_020283225.1\|2219669_2220221_+	Slp family lipoprotein	NA	NA	NA	NA
WP_013649802.1\|2220561_2222256_+	long-chain-fatty-acid--CoA ligase FadD	A0A2H4PQM9	Staphylococcus_phage	1.6e-32	25.9
WP_005163003.1\|2222350_2223472_+	ribonuclease D	NA	NA	NA	NA
WP_002211180.1\|2223601_2223871_-	cell division topological specificity factor MinE	NA	NA	NA	NA
WP_005163000.1\|2223874_2224687_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_013649803.1\|2224712_2225399_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_005162996.1\|2225949_2226312_+	hypothetical protein	NA	NA	NA	NA
WP_005162995.1\|2226589_2226862_+	YcgL domain-containing protein	NA	NA	NA	NA
WP_005162994.1\|2226900_2227971_+	lytic murein transglycosylase	NA	NA	NA	NA
WP_013649805.1\|2228051_2228708_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_005162992.1\|2228822_2229269_+	YcgN family cysteine cluster protein	NA	NA	NA	NA
WP_005162991.1\|2229333_2229690_+	hypothetical protein	NA	NA	NA	NA
WP_013649809.1\|2231396_2232242_-	EamA family transporter	NA	NA	NA	NA
WP_013649810.1\|2232475_2232733_+	hypothetical protein	NA	NA	NA	NA
WP_005164915.1\|2232894_2233935_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_013649811.1\|2234115_2234751_+	glutathione transferase	NA	NA	NA	NA
WP_032904217.1\|2234819_2235368_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_005164919.1\|2235868_2236102_+	hypothetical protein	NA	NA	NA	NA
WP_005164921.1\|2236824_2237214_+	ASCH domain-containing protein	NA	NA	NA	NA
WP_005164922.1\|2237331_2237574_-	DUF1480 family protein	NA	NA	NA	NA
WP_013649813.1\|2237686_2239396_-	diguanylate cyclase	NA	NA	NA	NA
WP_005164926.1\|2239618_2240629_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_005164928.1\|2243185_2243935_-	molecular chaperone	NA	NA	NA	NA
WP_013649814.1\|2243981_2244539_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_005164933.1\|2244550_2245108_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_013649815.1\|2245113_2245650_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_013649816.1\|2245977_2247402_-	MFS transporter	NA	NA	NA	NA
WP_013649817.1\|2247529_2248450_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_013649818.1\|2248462_2251093_-	PqiB family protein	NA	NA	NA	NA
WP_013649819.1\|2251061_2252309_-	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_013649820.1\|2252549_2253047_+	GAF domain-containing protein	NA	NA	NA	NA
WP_005170218.1\|2253142_2253871_+	RNA chaperone ProQ	NA	NA	NA	NA
WP_013649821.1\|2253890_2255966_+	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	4.3e-88	35.4
WP_005164945.1\|2256261_2257143_+\|protease	protease HtpX	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_015475

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

48549 : 56280

uncultured_Caudovirales_phage(57.14%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013749483.1\|48549_49917_+	trimeric autotransporter adhesin YadA	Q9MCI8	Enterobacteria_phage	2.5e-12	55.6
WP_013749484.1\|49986_50862_+	DMT family transporter	NA	NA	NA	NA
WP_010891241.1\|51183_51636_-	PprA	NA	NA	NA	NA
WP_010891242.1\|51791_52643_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.8e-16	36.9
WP_010891243.1\|52803_53385_+	recombinase family protein	A0A219YA40	Aeromonas_phage	2.6e-22	35.5
WP_010891244.1\|53402_53828_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	5.6e-51	70.7
WP_010891245.1\|53840_55130_-	arsenite efflux transporter membrane subunit ArsB	A0A2H4J144	uncultured_Caudovirales_phage	1.6e-165	70.2
WP_013749489.1\|55175_55496_-	As(III)-sensing metalloregulatory transcriptional repressor ArsR	A0A2H4J145	uncultured_Caudovirales_phage	1.7e-20	46.7
WP_013749490.1\|55581_56280_+	arsenic resistance NADPH-dependent reductase ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	7.7e-90	68.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_015224

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_015475

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection