1. NC_017374
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0
| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| NC_017374_1 | 530811-530890 | Orphan |
NA
Consensus repeat of NC_017374_1
|
1 spacers
spacers of NC_017374_1
>1.1|530834|34|NC_017374|CRISPRCasFinder GGTTAATAAAAAGAAAACAGGACAAGTAGCTAGC |
CRISPR arrays and Neighbor proteins around NC_017374_1
The CRISPR arrays of NC_017374_1 >merge|NC_017374|1|530811-530890|CRISPRCasFinder CCTGAAGAACCCATTTACGCTCAGGTTAATAAAAAGAAAACAGGACAAGTAGCTAGCCCTGAAGAACCCATTTATGCTCA >NC_017374|1|1|530811-530890|CRISPRCasFinder CCTGAAGAACCCATTTACGCTCA GGTTAATAAAAAGAAAACAGGACAAGTAGCTAGC CCTGAAGAACCCATTTATGCTCA
>NC_017374.1|WP_000428893.1|527470_527698_-|hypothetical-protein MENKSIGQIFKESLKKSFFSGLWSCLKWSFILTLISLGLFLLVFRFQPETIKKYIKDPKDLQFYDDLRKKNGWDK >NC_017374.1|WP_000668122.1|526980_527328_-|sodium:calcium-antiporter MKFFTRITDSYKKVVVTLGLAIAANPLMAVSSPATGITETKTLVVQIISVLAIVGGCALGVKGIADIWKISDDIKRGQATVFAYAQPIAMLAVAGGIIYLSTKFGFNIGEGGGAS >NC_017374.1|WP_000609469.1|526355_526979_-|cag-pathogenicity-island-type-IV-secretion-system-protein-CagD MINNNSNKKLRGFFLKVLLSLVVFSSYGSANDDKEAKKEALEKETNTPNGRVYTNLDFDSFKATIKNLKDKKVTFKEVNPDIIKDEVFDFVIVNRVLKKIKDLKHYDPVIEKIFDEKGKEMGLNVELQINPEVKDFFTFKNISTTNKQRCFLSLRGETREILCDDKLYNVLLAVFNSYDPNDLLKHISTIESLKKIFYTITCEAVYL >NC_017374.1|WP_000495987.1|523395_526347_-|cag-pathogenicity-island-type-IV-secretion-system-ATPase-CagE MFVASKQADEQKKLVIEQEVQKRQFQKIEELKADMQKGINPFFKVLFDGGNRLFGFPETFIYSSIFILFVTIVLSVILFQAYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFLFKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAANSYLANNYECFLDDGVILTNNYSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRDYGLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRIIRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYNFLVGMNEAPFICNRKDLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEISEYAPKSQSDLFDKINALDSEFIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSLVLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNFADFIAMRAMSFDGKEENNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSGKTVFMSMTLNAMGQFAYNFPANVSKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELGTDTGLNPFAWAACVQKTDATMEQKQTAISVVKELVKNLATKSDEKDENGNSVSFSLADSNTLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATDRLDFSKTIIGVDGSSFLDNNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPKVAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIREQCPTKIFLRNDGGNLSDYQRLANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKIIQNHSIIDKYQALRQMYQQIKEY >NC_017374.1|WP_000814269.1|522587_523394_-|type-IV-secretion-system-chaperone-CagF MKQSLREQKLLKILENDVLTILDSFSNYLFELREELDFIEEEMEGEITEQNLTALYDFSNFLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINEGQDPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIRQSYRILRLLEKPINNNISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQTDMSVEAKKKELFEKYFQNIDEVTNKMLDQENQNKNSD >NC_017374.1|WP_000855886.1|522104_522533_-|cag-pathogenicity-island-type-IV-secretion-system-translocation-protein-CagG MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPKETLEQKVAILNDYNDKNVNIKFDDISLGSFQPNDNLGINAMWGIQNLLMSQMMSDYGPNNSFMYGYAPTYSDSSFLPPILGY >NC_017374.1|WP_080005651.1|520976_522089_-|cag-pathogenicity-island-type-IV-secretion-system-translocation-protein-CagH MAGTQAIYESSSAGFLSQVSSIISSTSGVAGPFAGIVAGAMTAAIIPIVVGFTNPQMTAIMTQYNQSIAEAVSVPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQSAQIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAKYQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNASQMILGQSGLATSTYDTQAISNIRSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLTERVQTKIIVK >NC_017374.1|WP_041201158.1|519820_520966_-|cag-pathogenicity-island-type-IV-secretion-system-translocation-protein-CagI MKCFLNIFSFLTFCGLSLNGAEVVMTLEPALKAIQADAQAKQKTAQAELKAIEAQSSAKEKAIQAQIEGELRTQLATMSAMLKGANGVINGVNGMTGGFFAGSDILLGIMEGYSSALSALGGNVKMIVEKQKINTQTEIQNMQIALQKNNEIIKLKMNQQNALLEALKNSFEPSVTLKTQMEMLSQALGSSSDNAKYIAYNTIGIKAFEETLEGFETWLKEAMKKATLIDYNSLTGQALFQSAIYAPALSFFSSMSTPFGIVETFTLVPTKCPYLDGLKISACLMEQVIQNYRMIVALIQNKLSDADFQNIAYLNGINGEIKTLKGSVDLNALIEAAILNAENHLNYIENLEKKADLWEEQLKLERETTARNIANSKVIVK >NC_017374.1|WP_000855256.1|519110_519824_-|cag-pathogenicity-island-VirB5-family-T4SS-associated-adhesin-CagL MKTLVKNTIFSFLLLSVLMAEDITSGLKQLDSTYQETNQQVLKNLDEIFSTTSPSANDKMGEEDALNIKKAAMALRGDLALLKANFEANELFFISEDVIFKTYMSSPELLLTYMKINPLDQKTAEQQCGISDKILVLYCEGKLKIEQEKQNIRERLETSLKAYQSNIGGTASLIIASQTLVESLKNKNFIKGIRKLMLAHNKVFLNYLEELDALERSLEQSKRQYLQERQSSKIIVK >NC_017374.1|WP_000835458.1|518109_519030_+|cag-pathogenicity-island-type-IV-secretion-system-protein-CagN MKSIFKKLGSVAFYSLVIYGGLNAINTALLPSEYKELVALGFKKIKTFYQRHDDKEITKEEKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSVQKKAAKHRGLQELNETNANPLNDNPNGNSPTETKSNKDDNFDEMINKVNEAFVKPAAPLVPDEWRTPEIEIVINKCIISSNDYDGLRKCLIKDIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASCAICEKRKKEMEQENNYQDTTNASEFRATDTKENEAKDATFSNNRSKSELPNSVINQIEQSIAHGKK >NC_017374.1|WP_193334272.1|531955_532330_+|hypothetical-protein MIEFLEQIDHALNQRKNRKTIGIITPYNAQKRRLRSEVEKCGFKNFDELKIDTVGAFQGEEADIITYSTVKTYGNLSFLLDSKRLYVAISRAKENLIFVGKKSFFENLRSDEKNIFSAILQVCR >NC_017374.1|WP_000690387.1|532489_533257_-|glutamate-racemase MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQQGYLNVSHLATSLFVPLIEESILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKKNAHAFPKVEFHASGDVIWLEKQAKEWLKL >NC_017374.1|WP_001004722.1|533295_534612_-|transcription-termination-factor-Rho MNENAPTHKSSHKVKTHTPVSGYHIEDLRTYPTEKLLEIANKLKVENPQEFKRQDLMFEILKTQVTQGGYILFTGILEIMPDGYGFLRGFDGSFSDGHNDTYVSPSQIRRFALRNGDIVTGQVRSPKDQEKYYALLKVEAINYSPSDEIRNRPLFDNLTPLFPDEQIKLEYESTKVTGRMLDLFSPVGKGQRALIVAPPRTGKTELMKELAQGITSNHPEVELIILLVDERPEEVTDMQRSVKGQVFSSTFDLPANNHIRIAELVLERAKRRVEMGKDVVVLLDSITRLARAYNAVTPSSGKVLSGGVDANALHRPKRFFGAARNIEEGGSLTIIATALIETGSRMDEVIFEEFKGTGNSEIVLARNIADRRIYPAFDILKSGTRKDNILLGKDRLTKVWVLRNVMQQMDDIEALSFVYSKMQQTKDNEEFLNLMNEK >NC_017374.1|WP_000715283.1|534876_535080_+|50S-ribosomal-protein-L31 MKKGIHPEYIPCRVTCVTSGKEIEVLSTKPEMRIDISSFCHPFYTGSDKIADTAGRVEKFKQRYNLK >NC_017374.1|WP_000965274.1|535103_535973_+|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIIGHSFPNIAAKKREFIAFHSHNDQEFLNQIELSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNLQYDVLPGANALITAFCASGFLEGRFFYAGFLPHKSKERRLRIIKILNALAYLEEKTPVVFYESPHRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEISQIMTQLQKSNIQGEWVLVLLNEKKIEPSMGLSALLELDLPPKIKAKMEAAMTQKNAKELYCQRLSEEKKQCD >NC_017374.1|WP_001149450.1|535986_536670_+|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB MQAVVYGKQVITHLLNSHHEKLQEIYLSKEIDKKLFFALKKACPNIIKVDNKKAQSLAKGGNHQGVLAKVELPLAASLKEIKKAQKLLVLCGITDVGNIGGIFRSAYCLGMDGVILDFAREFAYEGIVRSSLGLMYDLPFSVMPNTLDLINELKTSGFLCLGASMQGSSQAENLSLKKCALFLGSEHEGLSKKILAKMDMVLSVKMRRDFDSLNVSVAAGILMDKIN >NC_017374.1|WP_000437288.1|536682_537657_+|hypothetical-protein MEQNKKSLENLDLSDVQNVSKDISGAALEELSLKNLDKNLQILKEVGAAEICKATKIASKNIHSILEKRYESLSRVHAKGFIQILEREYKIDLSAWVKEFDKVCVFKEGVGKEQKQETSPEETAKKPLKVELDYSINQANTSLSKKSSKWKPFVIVLGVVVIILVVVIIQNSSSLKEEREQESAIKPDTKNSSFNEVSPTEEKKLEPTPKPKEKQEKPKEQDKQEKEAIKENPNIIYIIPKRDIWVEVIDLDEKKNSFQKVFKKSYPLEAKNHRLLLRFGHGHLILKNNHQEQDYNDSKTRRFLYEPNKGLTLINEAQYKALQQ >NC_017374.1|WP_001037159.1|537653_538475_+|hypothetical-protein MNKLFLAFIVGGMLLSADALNDKIENLMGERSYHMNKLFLERLFKNRKDFYEMGRLDSLKLLNTLKENGLLSFNFDKPSVLKITFKASSNPLAFAKSINNSLNMMGYSYVLPIKMQSSSGENVFSYELKTEYILDPNILIETMKRHGFDFIDIRRVSLKEWEYDFALQKIKLPNARALVLSSDPVEFKEASGKYWLSVNQNAYLKISSNNPLWQPKIIFYDENLKIIQIIAKENRQQEIALNLLDGVRFIHITDAKNPIILKNGISVVFDAMP >NC_017374.1|WP_000234653.1|538545_538983_-|hypothetical-protein MVIHEKIKSRFSRNWSLRNRGRHFASSSVYFFSLLVITAVNRSSAVAWLLMPEHLIWWFLISFSGEFVADMAFGKKSKIFKTRFGISIVSGVSLLLGALPAHLFFVWFGFINWWAVFFIEAGADLLVGCVIQKIFFGKYWVDRYY >NC_017374.1|WP_041200937.1|539123_539375_+|hypothetical-protein MMFFIFFTNYVKYPLFSKMIASGEKFGFVLIERWLSNPKSIAFLRLDSREIDFIKRYFLKQSLGGILVVGGNYFKTPLISLRE |
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| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| NC_017374_2 | 918367-918564 | Orphan |
I-B
Consensus repeat of NC_017374_2
|
3 spacers
spacers of NC_017374_2
>2.1|918393|34|NC_017374|PILER-CR CAATAGTGCAAGTTCAAGCTTTGGTAATAGTAGT >2.2|918453|31|NC_017374|PILER-CR CAGCGCCCAATCCACTTTTGAAAACAGCAAT >2.3|918510|28|NC_017374|PILER-CR TGACAATACTAGCTTTAATAACGACACC >2.4|918394|33|NC_017374|CRISPRCasFinder AATAGTGCAAGTTCAAGCTTTGGTAATAGTAGT >2.5|918454|30|NC_017374|CRISPRCasFinder AGCGCCCAATCCACTTTTGAAAACAGCAAT >2.6|918511|27|NC_017374|CRISPRCasFinder GACAATACTAGCTTTAATAACGACACC |
CRISPR arrays and Neighbor proteins around NC_017374_2
The CRISPR arrays of NC_017374_2 >merge|NC_017374|2|918367-918564|PILER-CR,CRISPRCasFinder TTCAATCAAGGGACTTATAATTTTAGCAATAGTGCAAGTTCAAGCTTTGGTAATAGTAGTTTCAATCAAGGGACTTATCACTTTAACAGCGCCCAATCCACTTTTGAAAACAGCAATTTCAATCAAGGCACTTATAATTTTAATGACAATACTAGCTTTAATAACGACACCTTCAATCAAGGCACTTATAATTTTAAT >NC_017374|2|1|918367-918563|PILER-CR TTCAATCAAGGGACTTATAATTTTAG CAATAGTGCAAGTTCAAGCTTTGGTAATAGTAGT TTCAATCAAGGGACTTATCACTTTAA CAGCGCCCAATCCACTTTTGAAAACAGCAAT TTCAATCAAGGCACTTATAATTTTAA TGACAATACTAGCTTTAATAACGACACC TTCAATCAAGGCACTTATAATTTTAA >NC_017374|2|2|918367-918564|CRISPRCasFinder TTCAATCAAGGGACTTATAATTTTAGC AATAGTGCAAGTTCAAGCTTTGGTAATAGTAGT TTCAATCAAGGGACTTATCACTTTAAC AGCGCCCAATCCACTTTTGAAAACAGCAAT TTCAATCAAGGCACTTATAATTTTAAT GACAATACTAGCTTTAATAACGACACC TTCAATCAAGGCACTTATAATTTTAAT
>NC_017374.1|WP_000688601.1|916507_917506_+|type-I-glyceraldehyde-3-phosphate-dehydrogenase MKIFINGFGRIGRCVLRAILERNDTNPQLEVIGINDPANWEILAYLLEHDSVHGLLNKEARYSNGKLIIGSLEIPVFNSIKDLKGVGVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHFLYQNQAIVSNASCTTNAIAPICAILDKAFSIKEGMLTTIHSYTSDQKLIDLAHPLDKRRSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKKALKESINDLLITASKGTLKGVLEIDLKERVSSDFISNPNSVIIASDLTFTLENMVKIMGWYDNEWGYSNRLVDMAQFMYHY >NC_017374.1|WP_001240288.1|915669_916362_-|Bax-inhibitor-1/YccA-family-protein MALYDRANSRNAYAEDSVLHESELVSFVKTTYKFFAGSLLLATIGALLGLMNFQAVVQYKWVFFIAEIVAFFGLMFSKSKPGLNLFMLFAFTSLSGVTLVPLLGMVIAKAGLGAVWQALGMTTIVFGLMSVYALKTKNDLANMGKMLFIALIVVVVCSLINLFLGSPMFQVVIAGASAILFSLYIAYDTQNIVKGMYDSPIDAAVSLYLDFLNVFISILQIIGIFSDRDK >NC_017374.1|WP_001126591.1|912312_915570_-|carbamoyl-phosphate-synthase-large-subunit MPKRTDISNILLIGSGPIVIGQACEFDYSGTQSCKTLKSLGYRVILINSNPATVMTDPEFSHQTYIQPITPENIATIIKKEKIDAILPTMGGQTALNAVMQMHQKGMLEGVELLGAKIEAIKKGEDRQAFKEAMLKIGMDLPKGRYAYSELEALEAISEIGFPAIIRASFTLAGGGSGVAYNIEEFQELAKNALDASPINEILIEESLLGWKEYEMEVIRDSKDNCIIVCCIENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDASFAILREIGVDTGGSNVQFAIHPETLRMVVIEMNPRVSRSSALASKATGFPIAKVATMLAVGFSLDEIKNDITNTPASFEPSLDYIVVKIPRFAFEKFAGVSSTLGTSMKSIGEVMAIGGNFLEALQKALCSLENNWLGFESLSKDLEAIKKEIRRPNPKRLLYIADAFRLGVCVDEVFELCQIDRWFLSQIQKLVGVEEGINSSVLTDAKKLRRLKNLGFSDARIAAKIKENENLEVSPFEVELARSNLQIAPNFEEVDTCAAEFLSLTPYLYSTYAPNPLPPIGNKQEKQEKKILIIGSGPNRIGQGIEFDYCCVHASFALKDLNVKSVMLNCNPETVSTDYDTSDALYFEPIHFECVKSIIQRERVDGIIVHFGGQTPLKLAKDLAKMQAPIIGTPFKVIDIAEDREKFSLFLKELDIKQPENGMAKSVDEAYSIANVIGFPIIVRPSYVLGGQHMQILENIEELRHYLESVTHSLEISPKNPLLIDKFLEKAVELDVDAICDKKEVYIAGILQHIEEAGIHSGDSACFIPSTLSPEILDEIERVSAKIALHLGVVGLLNIQFAVYQNSLYLIEVNPRASRTVPFLSKALGVPLAKVATRVMVLEDLKEALKFYDKKNIVEYSKGVYKPKMPHFVALKEAVFPFNKLYGSDLILGPEMKSTGEVMGIARSLGLAFFKAQTACFNPIKNKGLIFVSIKDKDKEEACVLMKRLVELGFELCTTEGTHKALEKAGVKSLKVLKISEGRPNIMDLMMNGEISMAINTSDHKSQDDAKLIRASVLKNHVSHFTTLSAIEVLLLALEESSQKDELLALQDYLK >NC_017374.1|WP_001230008.1|911876_912308_-|hypothetical-protein MALVYLVQSDTTIGLLSKDSEKLNALKGRPKNQSVLIESTDFSTLKSLVRAPNAFKNLIRRSAKTTFIYPNSKAVRVVRGRHGDFLKRFKTLYSTSANLTQCAYDKEIASSLADVIMSDERGLFESSSSKIFKLYKHKKVRVR >NC_017374.1|WP_000998497.1|909253_911701_-|TonB-dependent-receptor MNDKRFRKYWSFSVVLTLLGMFELEAKEEEKEEKKTERNKDKEKNAQHTLGKVTTQAAKIFNYNNQTTISSKELERRQANQISDMFRRNPNINVGGGAVIAQKIYVRGIEDRLARVTVDGAAQMGASYGHQGNTIIDPGMLKSVVVTKGAAQASAGPMALIGAIKMETRSASDFIPKGKDYAISGAATFLTNFGDRETIMGAYRHNHFDMLLYYTHQNIFYYRDGDNAMKNLFDPKADNKVTASPSEQNNVMAKINGYLSERDTLTLSYNMTRDNANRPLRANFTGTFLPYSCGDFNAFPNEQNPDDCLFENDASLFKTYSVNLVHNVSLNYEREGGSRFGDPKLKINGYTSIRNVQIDPLFRPSDIAASIPFTPNPQLSQGEENQCVAQGGIYDALKQTCSITFKSLGGGSVVANKNLFIINSGFNANVIHTIDHKNDNLLEYGLNYQNLTTFDKAIPNSELVKPGDAPDACLRVIGPDDPNMNGRCQRNGATANVVGVYAQANYTLHPMVTLGAGTRYDVYTLVDKDWQLHVTQGFSPSVALNVSPLENLNFRLSYAYVTRGPMPGGLVWMRQDNLRYNRNLKPEIGQNAEFNTEYSSQYFDFRAAGFVQLISNYINQFSSTLFVTNLPAQDIIYVPGYEVSGTAKYKGFSLGLSVARSWPSLKGRLIADVYELAATTGNVFILTASYTIPRIGLSITWLSRFVTNLSYCSYSPYRNGPTDIDRRPSNCPKTPGIFHVHKPGYGVSSFFITYKPTYKKLKGLSLNAVFNNVFNQQYIDQASPVMSPDEPNQDKYARGMAEPGFNARFEISYKF >NC_017374.1|WP_014536310.1|907370_908915_-|outer-membrane-beta-barrel-protein-HofG MKQEKYFLTYSLSLLSFLLCPVEAFDYRFSGRVENFSKIGFNNSQINTKKGIYPTESFIDIVTLAQVKVNLLPKGIENHRLSVSLGGAIAAIPYDKTKYYINQANGKIFGSIVENFIGGYHGYFFNKYLGPAYAGTSQSASYHARPYVVDTAFLRYDYKDVFGFKAGRYEANIDFMSGSNQGWEVYYQPYKTETQRLRFWWWSSFGRGLAFNSWIYEFFATVPYLKKGGNPSNSNDFINYGWHGITTTYSYKGLDAQFFYYFAPKTYNAPGFKLVYDTNRDFENVGFRSQSMIMTTFPLYYRGWYNPETNTYSLEDSTPHGSLLGRNGVTLNIRQVFWWDNFNWSIGFYNTFGNSDAFLGSHTMPRGNNTSYISNEISVTTRHAGMIGYDFWDNTAYDGLADAITNANTFTFYTSVGGIHKRFAWHVFGRVSHANKNALGQVGRANEYSLQFNASYAFTESVLLNFRITYYGARINKGYQAGYFGAPKFNNPDGDFSANYQDRSYMMTNLTLKF >NC_017374.1|WP_000812580.1|905070_906657_+|Hop-family-adhesin-AlpB MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNPVGAEEDGGFMTFGYELGQVVQQVKNPGKIKAEELAGLLNSTTTNNTNINIAGTGGNVAGTLGNLFMNQLGNLIDLYPTLNTSSLHQCGSNGTTASGSTAAATTSNSPCFQGNLSLYNEMVSSIKTLRQNISNNIFQGNNNTTSANLSNQLSELNTASVYLTYMNSFLNANNQAGGIFQNNTNQAYGNGVTAQQIAYVLKQASITMGPSGDSGAAGAFLDAALAQHVFNSANAGNDLSAKEFTSLVQNIVSNSQNALTLANNANISNSTGYQVSYGGNIDQTRSTQLLNNTTNTLAKVTALNNELKANPWLGNFAAGNSSQVNAFNGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNGPTYNQVNLLTYGVGTDVLYNVFSRSFGSRSLNAGFFGGIQLAGDTYISTLRNSPQLASRPTATKFQFLFDVGLRMNFGILKKDLKSHNQHSIEIGVQIPTIYNTYYKAGGAEVKYFRPYSVYWVYGYAF >NC_017374.1|WP_000592421.1|903498_905049_+|Hop-family-adhesin-AlpA MIKKNRTLFLSLALCASISYAEDDGGFFTVGYQLGQVMQDVQNPGGAKSDELARELNADVTNNILNNNTGGNVAGALSNAFSQYLYSLLGAYPTKLNGNDVSANALLQGAVGSGTCAAAGTANSSSLDNSQSACTAAGYYWLPSLTDKILSTIGSQTNYGTNTNFPNMQQQLTYLNAGNVFFNAMNKALEAKNGTATNSGATGSDGQTYSTQAIQYLQNQQNILNNAANLLKQDELLLEAFNSTVAANIGNKEFNSAAFTGLVQGIIDQSQAVYNELTKNTISGSAVNSAGINSNQANAVQGRASQLPNALYNAQVTLNKINALNNQVRSMPYLPQFRAGNSRSTNIMNGFYTKIGYKQFFGKKRNIGLRYYGFFSYNGASVGFRSTQNSVGLYTYGVGTDVLYNIFSRSYQNRSVDMGFFSGIQLAGETVQSTLRDDPNVKLHGKINNTHFQFLFDFGMRMNFGKLDGKSNRHNQHTVEFGVVVPTIYNTYYKSAGTTVKYFRPYSVYWSYGYSF >NC_017374.1|WP_000894621.1|900474_902511_+|ATP-dependent-helicase MLETLQLNPEQRKAASALQGHNLIIASAGTGKTSTIVGRILHLLNNGIKPEEILLLTFTNKASNEMIARVAKYSKLSSKIEAGTFHAVAYRYLKEHYPNLSLKQPKELRKLLESIVDTKNALNATDEDKKPYTSQHLYALYSLYTNALKQEDFSAWLSSKNPEHAPYAAFYENILEEFENTKKKHDYIDYNDLLLLFKKAMLERPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYDQSIYAFNGADISIISNFTQKYKNARVFTLTKNYRSSKEILDLANQVIQHNQRIYPKNLEVVKSGKFNKPTLLNYNDNIAQCQDIAKRIVMRKDFKEVAVIFRNNASADQLEAALRSHNVPSKRKGSASFFESKEVALALDICALLFNPKDIMAAIHILSYISDIGSNTAKDIHEALMLLGNGDLKSALIQPNQEAKIYTKKKEITSMGLFEEIFALENSSRFNSVIDKAFHSHPVLMHPKISLNGAKTLSDFFILYTKAPTHSPSALIKHILESTFFQTFKTRLLKERSKNKDGSYNEFKKLQAQKRFNEKMDLLSSLAKNYQNLGRFLNGTLIGSSEATQGEGVNLLSVHASKGLEFKDIYIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHKPSVFLYEAGLLKLDSK >NC_017374.1|WP_000427108.1|899320_900466_+|class-I-SAM-dependent-methyltransferase MENFLNKWDIKTLGQVFTPKNIVDFMLTLKQNHGSVLEPSAGDGSFLKCLKKAVGIEIDPKICPKNALCMDFFDYPLENQFDTIIGNPPYVKHKDIVPSTKEKLHYSLFDERSNLYLFFIEKAIKHLKPKGELIFITPRDFLKSTSSVKLNEWIYKEGTITHFFELGDQKIFPNAMPNCVIFRFCKDDFSRIANDGLQFVCKKGILYFLNQSYTQKLSEVFKVKVGAVSGCDKIFKNETYGNLEFVTSITKRTNVLEKMVFVNKPNDYLLQHKDSLMQRKIKKFNESNWFEWGRMHHVSPKKRIYVNAKTHQKNPFFIHQCPNYDGSILALFPYNQNLDLQNLCDKLNAINWQELGFVCDGRFLFSQRSLENALLPKDFFN >NC_017374.1|WP_001160394.1|924838_925954_+|Hop-family-outer-membrane-protein-HopJ/HopK MQFQKTLFPLSLPLSLSLFLSYCIAEENGAYASVGFEYSISHAVEHNNPFLNQERIQTISNAQNQINKLNQVKNEITNMPNTFNYINNALKNNSKLTPTEKQAETYYLQSTLQNIEKIMMLSGGVASNLKLAQALEKMQEPTTNPLELVENLKNLELQFSQSQNNMLSSLSSQITQISNSLNALDPSSYSKNVSSMYGVGLSVGYKHFFTKKKNQGFRYYLFYDYGYTNFGFVGNGFDGLGKMNNHLYGLGIDYLFNFIDNAQKHSSVGFYVGFALAGSSWVGSGLGMWVSQTDFINNYLTGYQAKMHTSFFQIPLNFGVRVNVDRHNGFEMGLKIPLAVNSFYETHGKGLDTSLFFKRLVMFNVSYVYSF >NC_017374.1|WP_001115880.1|926021_926228_-|4-oxalocrotonate-tautomerase-family-protein MPFINIKLVPENGGPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYGLGGESIHHLRQKN >NC_017374.1|WP_001099625.1|926364_926946_+|recombination-protein-RecR MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCTSCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSIEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHLHLTFTKIAQGVPTGVNFENIDSVSLSRAFNSRIKA >NC_017374.1|WP_001052435.1|926942_928088_+|tRNA-pseudouridine(13)-synthase-TruD MNLNFMPLLHAYNHASIDFHFNSSTRDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEMLQIFSQILGVKIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTSNFQERNLKILSLNYHHNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIAQFGMPNYFGSQRFGKFNDNHKEGLKILQNETKFAHQKLNAFLISSYQSYLFNSLLSKRLEISKIISTFSVKENLEFFKQKNLSVNSNALKALKNQAHPFKILEGDVMRHYPYGKFFDALKLEKESERFLNKEAVPTGLLDGKKALYAKNLSLEIEKGFQHNLLSSHARTLGSRRFFWVFAENITSQYIKEKAQFELGFYLPKGSYASALLKEIKHEKGENNDEF >NC_017374.1|WP_162466939.1|928056_929007_+|zinc-metalloprotease-HtpX MRKEKIMTNFEKIIAQNRLKTNAVLTTYCAIFAFIGLLVDAIRINANDLGIAFFKLITFQIFPTITIVMFVVAFVIILVCIQNFSSIMLSGDEYKLIDPSKVLSSKENQIHRLLLELLEEAKLHFEPKLYIINAPYMNAFASGWDESNSLIALTSALIERLDRDELKAVIAHELSHIRHNDIRLTMCVGILSNIMLLVANFSVYFFMGNRKNSGANLARMILLVLQIILPFLTLILQMYLSRTREYMADSGAAFLMHDNKPMIRALQKISNDYTNNDYKEIDKNSTRSAAYLFNAEMFSTHPSVKNRIQSLRKRVI >NC_017374.1|WP_000426984.1|929007_929550_+|GTP-cyclohydrolase-I-FolE MENFFNQFFENIGEDKNREGLKETPKRVQELWKFLYKGYKEDPRVALKSAYFQGVCDEMIVAQNIEFYSTCEHHLLPFLGNISVGYIPKEKIVGISAIAKLIEIYSKRLQIQERLTTQIAETFDEIIEPRGVIVVCEAKHLCMSMQGVQKQNAIIKTSVLRGLFKKDPKTRAEFMQLLKS >NC_017374.1|WP_000070307.1|929565_930477_+|polyprenyl-synthetase-family-protein MSNPNLSFYCNECERFESFLKNHRLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELLSNSLLESRIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLDGAKNSFVNLLGLEKASGYAHTLKTEVLNDLNLLKPPYPLLQENLNALLNTLFKGKT >NC_017374.1|WP_000722464.1|930473_931277_+|5'/3'-nucleotidase-SurE MKKILLTNDDGYHAKGIKALEQALEEMAEIYVVAPKHEKSACSQCITITAPLRAEKIKGKEGRHYRIDDGTPSDCVYLAINELFKHVCFDLVISGINLGSNMGEDTIYSGTVAGAIEGTIQGVPSIAISQILSNRNKNTPFSFDLAQKIIQDLVQNIFTKGYPLKGRKLLNVNVPNCSLQEYQGERITPKGYRLYKKEVHKRTDPKNESYFWLGLHPLEWQKRENEDRLSDFDAIASNHASITPLNLDLTSYDDLKSLESWHEGMLK >NC_017374.1|WP_001034745.1|931273_931933_+|hypothetical-protein MNKKHRLAFLGLIVGVLFFFSACQHRLHMGYYSEVTGDYLFNYNSTIVVAYDRSDAMTSYYINVIVYELQKLGFYNVFTQAEFPLDKAKNVIYARIVRNISAVPFYQYNYQLIDQVNKPCYFLGGQFYCSQTPTDYYAINGFSEQILMSANSHFILDWYDVVLQKRVLYVDGSVSGRTCGYQMLYRDLIKSTIKRIDFNRPERYYYNLRLPLYQPCYRQ >NC_017374.1|WP_000236845.1|931934_932537_+|6-pyruvoyl-tetrahydropterin-synthase-family-protein MVIRRLYKFCASHVVRNCSSLRCAQNIHGHNYEVEVFIETNRLDNANMALDFGLMQQEMQTFIDSFDHAHHFWDKESLEFQRFIETNCVRYVKCSFNLSAESYALMFLYYLTRILQKSVFSNNEGELKVSSVRVHETKNGYAESFLNDLENPYFKSLVHDHCVSFSQGIQSLWHDKDFFHKIISDEGKCFFHAKPLHQIP |
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| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_ID | Protospacer_location | Mismatch | Identity |
|---|
| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_phage_ID | Hit_phage_def | Protospacer_location | Mismatch | Identity |
|---|---|---|---|---|---|---|---|---|
| NC_017374_2 | 2.3|918510|28|NC_017374|PILER-CR | 918510-918537 | 28 | NZ_CP045351 | Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence | 1090167-1090194 | 5 | 0.821 |
| NC_017374_2 | 2.6|918511|27|NC_017374|CRISPRCasFinder | 918511-918537 | 27 | NZ_CP045351 | Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence | 1090168-1090194 | 5 | 0.815 |
| NC_017374_2 | 2.2|918453|31|NC_017374|PILER-CR | 918453-918483 | 31 | MK448589 | Streptococcus satellite phage Javan632, complete genome | 4592-4622 | 6 | 0.806 |
| NC_017374_2 | 2.5|918454|30|NC_017374|CRISPRCasFinder | 918454-918483 | 30 | MK448589 | Streptococcus satellite phage Javan632, complete genome | 4593-4622 | 6 | 0.8 |
| NC_017374_2 | 2.2|918453|31|NC_017374|PILER-CR | 918453-918483 | 31 | NZ_CP022523 | Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence | 752261-752291 | 7 | 0.774 |
| NC_017374_2 | 2.5|918454|30|NC_017374|CRISPRCasFinder | 918454-918483 | 30 | U88974 | Streptococcus thermophilus temperate bacteriophage O1205, complete genome | 23169-23198 | 7 | 0.767 |
| NC_017374_2 | 2.5|918454|30|NC_017374|CRISPRCasFinder | 918454-918483 | 30 | NC_004303 | Streptococcus phage O1205, complete genome | 23169-23198 | 7 | 0.767 |
| NC_017374_2 | 2.2|918453|31|NC_017374|PILER-CR | 918453-918483 | 31 | U88974 | Streptococcus thermophilus temperate bacteriophage O1205, complete genome | 23169-23199 | 8 | 0.742 |
| NC_017374_2 | 2.2|918453|31|NC_017374|PILER-CR | 918453-918483 | 31 | NC_004303 | Streptococcus phage O1205, complete genome | 23169-23199 | 8 | 0.742 |
| NC_017374_2 | 2.5|918454|30|NC_017374|CRISPRCasFinder | 918454-918483 | 30 | NZ_CP022523 | Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence | 752261-752290 | 9 | 0.7 |
1. spacer 2.3|918510|28|NC_017374|PILER-CR matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 5, identity: 0.821
tgacaatactagctttaataacgacacc CRISPR spacer taagaatattagctttagtaacgacacg Protospacer *.* ****.********.*********
2. spacer 2.6|918511|27|NC_017374|CRISPRCasFinder matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 5, identity: 0.815
gacaatactagctttaataacgacacc CRISPR spacer aagaatattagctttagtaacgacacg Protospacer .* ****.********.*********
3. spacer 2.2|918453|31|NC_017374|PILER-CR matches to MK448589 (Streptococcus satellite phage Javan632, complete genome) position: , mismatch: 6, identity: 0.806
cagcgc-ccaatccacttttgaaaacagcaat CRISPR spacer -accgtaccaatcgccttttgaaaacagcaag Protospacer * **. ****** ****************
4. spacer 2.5|918454|30|NC_017374|CRISPRCasFinder matches to MK448589 (Streptococcus satellite phage Javan632, complete genome) position: , mismatch: 6, identity: 0.8
agcgc-ccaatccacttttgaaaacagcaat CRISPR spacer -ccgtaccaatcgccttttgaaaacagcaag Protospacer **. ****** ****************
5. spacer 2.2|918453|31|NC_017374|PILER-CR matches to NZ_CP022523 (Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence) position: , mismatch: 7, identity: 0.774
--cagcgcccaatccacttttgaaaacagcaat CRISPR spacer atcaagg--caatctccttttgaaaacagcaac Protospacer **. * *****. ****************.
6. spacer 2.5|918454|30|NC_017374|CRISPRCasFinder matches to U88974 (Streptococcus thermophilus temperate bacteriophage O1205, complete genome) position: , mismatch: 7, identity: 0.767
agcgcccaatccacttttgaaaacagcaat CRISPR spacer agcgcccaaaacacttttgaaaactgatcc Protospacer ********* ************* * .
7. spacer 2.5|918454|30|NC_017374|CRISPRCasFinder matches to NC_004303 (Streptococcus phage O1205, complete genome) position: , mismatch: 7, identity: 0.767
agcgcccaatccacttttgaaaacagcaat CRISPR spacer agcgcccaaaacacttttgaaaactgatcc Protospacer ********* ************* * .
8. spacer 2.2|918453|31|NC_017374|PILER-CR matches to U88974 (Streptococcus thermophilus temperate bacteriophage O1205, complete genome) position: , mismatch: 8, identity: 0.742
cagcgcccaatccacttttgaaaacagcaat CRISPR spacer tagcgcccaaaacacttttgaaaactgatcc Protospacer .********* ************* * .
9. spacer 2.2|918453|31|NC_017374|PILER-CR matches to NC_004303 (Streptococcus phage O1205, complete genome) position: , mismatch: 8, identity: 0.742
cagcgcccaatccacttttgaaaacagcaat CRISPR spacer tagcgcccaaaacacttttgaaaactgatcc Protospacer .********* ************* * .
10. spacer 2.5|918454|30|NC_017374|CRISPRCasFinder matches to NZ_CP022523 (Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence) position: , mismatch: 9, identity: 0.7
agcgcccaatccacttttgaaaacagcaat CRISPR spacer tcaaggcaatctccttttgaaaacagcaac Protospacer . *****. ****************.
| Region | Region Position | Protein_number | Hit_taxonomy | Key_proteins | Att_site | Prophage annotation | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DBSCAN-SWA_1 |
452278 : 460790
Sequences of DBSCAN-SWA_1
Nucleotide sequences of DBSCAN-SWA_1 >NC_017374|452278:460790|DBSCAN-SWA TTTAGCTTTTCAAAAATGCCTCTATCCTTTTGACGCTCTCTGTTTTGCCTAAAATAAAAAGCACTTCTTTAAGGCCTATCCCGCCCCCCTTGCCCAAAAGGGCTAATCTTAAAGGCTGCATGAAACTACCCGCTTTAATCTTTTCTTCTTCAATGATTTGGTGCATGGCGTTTTCTAGCGCGCTTTCATCGTTGAAATCAGTTTTATCTAGCGCCAATTTAAACTTTTCTAACAAGGGCATGACGAGCGCTTGATTGAGTTTTTTAAAAACCTTTTCTTCATACTCTATAGGAGCGGTTAAAACCTCATCTATTTTAAGGGCTAATTCTTTTAGGGTTTGAGATCTTTCTTTGAGAGCGTCCAACAAGCGATCCAATTGAGCGGGGTTTAAATGAGAAAGATCGCTAAAACTAAAAGGCTTTAAAAGTTTTAATAATTCCTGCGCGCTTTGGTTTTTCAAATAATGAGCGTTGAGCCAATTAAGTTTGTGCCAGCTAAAGCAACTGGGCGAAGAATTTAAATCTTTAGGGTCAAACCATTCCAATAATTCTTGCATGCTAAAAACCTCTTTATCTTGATAGCTCCACCCCAAACGCACTAAAAAATTCACTAAAGCTTCTTTAAGATAGCCCATTTCTTGATAGTCCATCACATTAGTGGCCCCATGGCGTTTGCTTAGTTTTTGCCCTTCTTCATTCAAAATCATCGGCACATGGAAAAAATTAGGGATTTTAAAATTCAAAGCCTTATAGAGAATGATCTGTTTAGGGGTGTTAGAAAGGTGATCATCGCCTCTAATCACATCAGTAATCCCCATTAAAGCGTCATCAATAGTAACCACAAAGTTATAAGTGGGCGTCCCATCGCTCCTGGCGATAATAAAATCGTCTATTTCGTTAGTGTTCACTCTCACTTCGCCTTTAACCCCATCATTAAAAACAATCACCTCATTTTGGGGGACTTTGATCCTTACCACAGGCTCTATGCCTTTAGGGGGCGTGCCTTTAAAATCACGATAACGATTGTCATAGCGTGGGGTTTCTTTCCTGGCTTTTTGTTCTTCTCTCAAAGCGTCCAACTCATCTTTGCTCATGTAGCAATAATAGGCTTTGTCTTCGTTTAAGAGTTTTTGAATGTATTCTTTATAAATTTCAAAGCGTTTGGATTGATAGAGGATTTCTCCATCGTGTTCTAGCCCCACCCATTTGAAAGCTTCTACAATGGCGTTAGCCGCTTCTATGGAGTTACGGCTCAAATCCGTGTCTTCAATGCGTAAAAAAAACTTTCCTTGATTGGCTCGTGCAAAAAGATAATTGAAAATGGCTGTCCTTAAGCCTCCTATGTGGAGGTAGCCAGTGGGCGATGGAGCGAAGCGCGTAACGATCAAACTCATTATTCTAACCTTAAAAATAAAATGCTCTTATTGTATTCAAAAATGGCTTAAAAATTGTTTCACTTTTTTCTATTAAAATTAGTGTATCATTGAGATTATTTTTAATTAGGATCAACCCATGCAATTTATGTTTATAGTTTTTAGGGGGGGGTAAATGCCTTCAAACGCTCTTTTGATTGAAGAAATCGCTCGCTTAATCAATGTTTCTCATAGCAGCGTGCGTAATTGGATCAAAACCAATCTTTTAGAAAAATTAGAGATTGATCATAAAATTTATGTGAAAACGAGTTCTTTTTTAGATTTTTGCCGCAACCATTTAGGGAAAAACAAGCTTAACAAATACGCTAACAAATCCTTAAAAGGCGCGCACAACCATCAAGAATTGATTTTAAAATACCTAGAAATGTTAGAAAATAGCTCTGATTTAGAAAAGTTGGGTTCTTATTATGAAGAAGAACTTTCTAATACCACCAGAAATTTAGAAGGCATTTACTACACTCCTAATAGGATAGTAGAACAACTTTTCACTCTCCCTAAAGATTTTGATACCACTCAAGCGACTTTTTGCGATCCGGCTGTGGGGAGCGGGAATTTTGTCATGCATGCTTTAAAACTGGGGTTTAAGGTTGAAAATATCTACGGCTATGATACAGACGCCTTTGCTGTCACTTTGACTAAAAAGCGTATTAAAGAGCGTTATCGTTTAGATTGCCCTAATATCATGCAAAAAGATTTTTTGAGTTTAAAACATGCTCCGCAATTTGATTGCATTTTCACTAACCCGCCATGGGGTAAGAAATACAACCAAAACCAAAAAGAAAATTTCAAACAGCGTTTTAATCTCTCTCAAAGCCTAGATAGCGCGTCGCTCTTTTTTATGGCGAGTTTGAATTGCTTAAAAGAAAACGCTCATTTGGGGCTATTATTACCCGAAAGTTGTTTGAATATTGATGCGTTCAGTAAAATGCGAGAAGTGGCTTTGAAGTTTCAAATGAGAAGCCTGATTGATTTTAACAAACCTTTTAAAAATCTAATGACTAAGGCTGTGGGTTTGGCGCTTAAAAAAACCCCTAACAAGGATCAAAAAATCTCATGCTTTTATCAAAATAGCAAGTTCAAACGATCGCCTTCTTCTTTTTTCAACAACCCTAAAAAGATTTTTAATATCCATTGCTCTCACCAAAAAAATAAAATTTTAGACCACCTTTTTTCCATTCCTCATATGACTTTAAAAAATAACGCTCATTTTGCTTTAGGGATTGTTACAGGCAACAATAAAGAAAAATTACACTCCAAACAAGAAAAAAATACCATTCCTATTTTTAGGGGTTCAGATATTTTAAAAGACGGATTAAAAGCCCCTAGCCAATTCATTAACGCTGATTTAAAAGACTGCCAGCAAGTCGCTCCTTTAAGCCTTTATCAGGCTAGAGAAAAAAATCGTGTACAAATTCATTTCTTTAAAACTGGTCTTTTTTTATGACAATAAGCAACGCCTTTTTTTAAATAGCGCGAACATGTTTGTTTTAAAAGAAAATTTCCCTATCAACGCTCATGCGCTAAAAGAATTGTTAAACAGCGATTTAATGCAATTCATTTTTGAATCGCTTTTTAAAACGCATAAAATTTTAAGAAAAGATTTGGAATGTTTACCCCTATTTACGCAATTTATTAACAATGGTTTTGATGAAAAATTTTATTTAAAAAATTTAGGGATAGAAAAAAAAGACCCTAAACATTTCACAATCAGGAAAAACCATGCGCATCGCTTGTCTTTTGGCTTTAGGGGATAACCTCATCACGCTTAGCCTTTTAAAAGAAATCGCTCTCAAACAGCAGCAACCCCTTAAAATCCTAGGCACTCATTTGACTTTAAAAATCGCCAAGCTTTTAGAATGCGAAAAACATTTTGAAATCATTCCTCTTTTTGAAAATATCCCCGCTTTTTATGACCTTAAAAAACAAGGCGTTTTTGGGGCGATGAAGGATTTTTTATGGTTGTTAAAAGCGCTTAAGAAGCACAAAGTCAAACACTTGATTTTAGAAAAACAAGATTTTAGAAGCGCTCTTTTAGCCCAATTCATTCCCATAACCACTCCAAATAAAGAAATTAAAAATGTTTATCAAAACCGCCAGGAGTTGTTTTCTCAAATTTATGGGCATGCTTTTGATAACCCTTTATATCCCATGAGTGTAAAAAACCCCAAAAAGATTTTGATCAACCCTTTCACAAGAGAAAATGATAGGAATATTTCTTTGGAGCATTTAAAAATCGTTTTAAAACTCTTAAAACCCTTTTGTGTTACTCTTTTGGATTTTGAAGAACGATACGTTTTTTTAAAAGATGAAGTTACTCATTATCGCGCTAAAACCAGTTTAGAAGAAGTTAAAAACCTGATTTTAGAAAGCGATTTGTATATAGGGGGGGATTCGTTTTTAATCCATTTGGCTTACTATTTAAAGAAAAATTATTTTATCTTTTTTTATAGGGATAATGACGATTTCATGCCGCCTAATGGTGGGAATGAGAATTTTCTAAAAGCCCATAAAAGCCATTTCATAGAACAGGATTTAGCCAAAAAATTCCGCCATTTGGGGCTATTATAATATTGTGTTATACTTCTAATTTCAATTTTGCTTGTTAGGACATTCATGAAAAATATTAGAAATATCGCTGTAATCGCGCATGTTGATCATGGGAAAACCACTTTAGTGGATGGCTTGCTTTCTCAATCTGGCACATTTAGTGAGAGGGAAAAAGTGGATGAAAGGGTGATGGATAGCAACGATTTAGAAAGAGAAAGGGGGATCACTATCCTGTCTAAAAACACCGCTATTTATTACAAAGACACTAAAATCAATATCATTGACACTCCCGGGCATGCTGATTTTGGGGGCGAAGTGGAGCGCGTTTTAAAAATGGTGGATGGGGTGTTGCTTTTAGTGGACGCTCAAGAAGGGGTCATGCCTCAAACTAAATTCGTGGTTAAAAAGGCTTTGAGTTTTGGGATTTGCCCTATTGTGGTGGTGAATAAAATTGATAAGCCTGCCGCTGAACCGGACAGAGTGGTGGATGAAGTTTTTGACTTGTTCGTGGCGATGGGGGCTAGCGATAAACAATTGGATTTCCCTGTCGTGTATGCCGCTGCTAGAGATGGCTATGCGATGAAAAGTTTAGACGATGAAAAGAAGAATTTAGAGCCTTTGTTTGAAACGATTTTAGAGCATGTGCCAAGCCCTAGCGGGAGCGTTGATGAGCCTTTGCAAATGCAAATTTTCACGCTTGATTATGACAATTATGTGGGCAAAATCGGTATCGCTAGAGTGTTTAATGGCTCGGTTAAAAAGAATGAAAGCGTGCTGTTGATGAAAAGCGATGGGAGTAAAGAAAATGGCCGTATCACTAAGCTTATAGGCTTTTTAGGGCTGGCTAGGACTGAGATTGAAAACGCTTATGCGGGCGATATTGTAGCGCTTGCTGGGTTTAATGCGATGGATGTGGGCGATAGCGTCGTTGATCCCACTAACCCCATGCCTTTAGACCCCATGCATTTAGAAGAGCCTACGATGAGCGTGTATTTTGCTGTCAATGATTCGCCCTTAGCTGGGTTGGAAGGAAAGCATGTTACTGCCAATAAATTAAAAGACAGACTCTTAAAAGAAATGCAAACCAATATCGCTATGAAATGCGAAGAAATGGGCGAAGGCAAGTTTAAAGTGAGCGGGCGTGGGGAATTGCAGATCACTATTTTAGCTGAAAACTTGCGCCGTGAAAGGTTTGAGTTTAGCATTTCACGCCCTGAAGTCATCATTAAAGAGGAAAATGGTGTTAAATGCGAGCCTTTTGAGCATTTAGTGATTGACACGCCCCAAGATTTTAGTGGGGCTATCATTGAGAGATTAGGCAAAAGAAAAGCCGAGATGAAAGCGATGAATCCCATGAGTGATGGCTATACAAGATTAGAATTTGAAATTCCTGCAAGAGGGCTTATCGGTTACAGGAGCGAGTTTTTAACCGACACCAAGGGCGAAGGCGTGATGAATCATAGCTTTTTGGAATTCCGCCCTTTTAGCGGGAGCGTGGAATCGCGCAAAAATGGGGCGCTCATTAGCATGGAAAATGGCGAAGCGACCGCTTTTTCCCTTTTCAATATCCAAGAAAGAGGCGCGCTTTTTATCAACCCTCAAACGAAGGTTTATGTGGGCATGGTCATTGGCGAACACAGCCGGGATAATGATTTAGATGTCAATCCTATCAAATCCAAGCACTTAACCAACATGAGAGCGAGCGGGAGCGATGATGCGATCAAACTCACCCCGCCTAGGACTATGGTGCTAGAAAGGGCGTTAGAATGGATTGAAGAAGATGAGATTTTAGAAGTTACCCCCTTGAATTTAAGGATCAGGAAAAAGATTTTAGACCCCAACATGAGGAAAAGGGCGAAAAAATAAATAAAACTTTTTGGAATGCATGCGAATTTATTCAACCAAAACGCTAGTAAAAAAGATGTTTTTTTGCACAATTTGCGTTCTAATAATGGGCGTTACAAACGCTATGTAAAAGCCCCTTTAAGATATGGTGGGGGCAAGTCTTTAGCTGTAGGGTTAATAGTGGAGTGTATACCTAATGGTGTGCGTAGGGTTATTAGCCCTTTTATAGGTGGGGGGAGCGTAGAAATTGCATGCACGACAGAGTTGGGTTTAGAAGTGTTAGGCTTTGATATTTTTGATATTTTAGTGAATTTTTATCAAGCGTTACTCAAAGACAAACAAGCTCTTTATGATAATTTGCTCTCTTTAGAACCTAATCAAGAAACTTACAGCATTATCAAGCAAGAGTTAAAAGCCCATTATAAAAAAGAATGCGTTTTAGACCCTTTAATTTTAGCTAGAGATTATTACTTTAACTTTAATTTAAGCTATGGGCCGGGATTTTTAGGGTGGATGAGTAAAATTTACACTGACAAAGAACGCTATCTAAACGCCCTTTTAAAAATTAAAGATTTTAACGCCCCCAGTTTAAAGGTGGAATGCTCTAGTTTTGAAGAAGTGTTGCTCGCTTATCCTAATGATTTTTTCTATCTTGACCCCCCTTATGTGTTAGAAAATTCTAAAATGTTTAAGGGGATTTATCCTATGCGTAATTTTCCTATCCACCACAATGGTTTTAAACATGAAGTATTGGCTCACATGCTAAAAAGGCATAAAGGGCCATTTATTTTAAGCTATAATGACTGCGAATTGGTAAGGAATGCTTATAAGGATTTTAAAATTTTAGAACCATCTTGGCAATACACTATGGGACAAGGCGAAATCAGAATGGGTAAAAACCGCTTAGAAAGAGGCGATAATAACCATGTCAAACAATCTCATGAGTTATTGATTATCAAGGAGTAAAAATGCATATTAGCGGAGTCAAAACTGCCTTTAAAATCGCTGGTGTAGAATACGCGAAAGACAGCACAAAGTTGAATTTCAACTATCTTAAGGATTTAAAAGATGAAAACAATCAATCTTTATCTCAAAATATTTTGACTCAAAATGTGGCTAGAGTGTATTTAATTGTAGTGGATGGTGAGATTAAAAAAATCGGTGGCTCTCAAGCGGATGGCGGGATTAAAAGCACGCTCAATATTTATAAAGACGGGGAGTCAAAGGGAGGCCTAGTGTTAGAAGTTTTGGCGTGTGGTATTTTCTTTATTACACAATACTTACAGGGGCTAAAATAGAATTTTACATGATTTATCAGCCTAATTTTGAAACTCAAGTGAAAGGCTTGTTTGGTTTTTGTGCAATCAAAGACGCAAGCATCAGCTATAAACTTTTAGAGCAAGCTTGTCTGACGGATTATAGAAACAATAGCCATGACGCATTGCCCGAATGGAATGCGCGAGAGCAAGGTAAAGATTGGCCAAACGATATTAAAGATGAGCATGCCAATACCACTCAAAAAGCTCAAAACAGAGAAAAGGCCGTCCATAGAAAAGCGATTGACAAACCTGGCAGAACTTTAAAAGATTGAATAAATGATCTTAACCCAATTTCAAAAAGGGCTCTAAGTTTTTGCTCCATTTAAAAAGTGTGGGTTTAGATGAAAGGAAGAAATAAAACTTGTATAAAGTAGCCGATATTTTTTGTGGTGCTGGAGGGTTGAGTTATGGTTTTTCTGTGCACCCTTATTTTGAATTGATATGGGCTAACGATATAGACAAAGACGCTATTTTAAGCTATCAAGCTAACCATAAAGAAACGCAAACCATTTTATGCGATATTGCGCAACTTCATTGCCACAACTTGCCATGCGTTCCAATTGATATTCTACTAGGCGGACCACCATGCCAGAGCTATTCTACCCTTGGCAAAAGAAAAATGGATGAAAAAGCGAATCTGTTTAAAGAATATTTGCGGATCTTAGATTTAGTGAAACCAAAAATATTTGTTTTTGAAAATGTGGTGGGTTTAATATCTATGCAAAAAGGGCAATTGTTCCAACGAATTTGTAACGCTTTTAAAGAGAGAGGTTATATTTTAGAGCATGCCATTTTAAACGCCCTAGATTATGGTGTGCCTCAAGTAAGAGAGCGAGTCTAAACCCATAAAAACGCATTTTTCTCTAAAAGACGCTTTAGGGGATTTACCGCCCATTCAAAGCGGTGAAAATGGCGATGCTTTAGGTTATCTTAAAAATGCGGATAACGTTTTTTTGGAATTTGTGCGAAATTCTAAAGAATTAAGCGAGCATAGCAGTCCTAAAAACAATGAAAAACTGATAAAAATCATGCAAACGCTAAAAGACGGGCAGAGTAAAGACGATTTGCCAGAAAGTTTACGCCCCAAAAGTGGTTATATTAATACCTATGCCAAAATGTGGTGGGAAAAACCAGCCCCCACCATTACGAGAAATTTTTCTACCCCAAGCAGTTCTAGGTGTATCCATCCAAGGGACTCTAGGGCGTTAAGCATTAGAGAGGGGGCAAGATTGCAAAGCTTTCCTGATAATTATAAATTCTATGGGAGTGCTAGCGCTAAAAGATTGCAAATTGGCAATGCCGTGCCACCCTTATTGAGTGTAGTGCTCGCTCATGCTGTCTTTGATTTTTTAAGGGGTAAAAATGTTTGA
Protein sequences of DBSCAN-SWA_1 >NC_017374|452278:460790|459353_459692_+|WP_193334271.1|DBSCAN-SWA MWYFLYYTILTGAKIEFYMIYQPNFETQVKGLFGFCAIKDASISYKLLEQACLTDYRNNSHDALPEWNAREQGKDWPNDIKDEHANTTQKAQNREKAVHRKAIDKPGRTLKD >NC_017374|452278:460790|456322_458122_+|WP_000790246.1|DBSCAN-SWA MKNIRNIAVIAHVDHGKTTLVDGLLSQSGTFSEREKVDERVMDSNDLERERGITILSKNTAIYYKDTKINIIDTPGHADFGGEVERVLKMVDGVLLLVDAQEGVMPQTKFVVKKALSFGICPIVVVNKIDKPAAEPDRVVDEVFDLFVAMGASDKQLDFPVVYAAARDGYAMKSLDDEKKNLEPLFETILEHVPSPSGSVDEPLQMQIFTLDYDNYVGKIGIARVFNGSVKKNESVLLMKSDGSKENGRITKLIGFLGLARTEIENAYAGDIVALAGFNAMDVGDSVVDPTNPMPLDPMHLEEPTMSVYFAVNDSPLAGLEGKHVTANKLKDRLLKEMQTNIAMKCEEMGEGKFKVSGRGELQITILAENLRRERFEFSISRPEVIIKEENGVKCEPFEHLVIDTPQDFSGAIIERLGKRKAEMKAMNPMSDGYTRLEFEIPARGLIGYRSEFLTDTKGEGVMNHSFLEFRPFSGSVESRKNGALISMENGEATAFSLFNIQERGALFINPQTKVYVGMVIGEHSRDNDLDVNPIKSKHLTNMRASGSDDAIKLTPPRTMVLERALEWIEEDEILEVTPLNLRIRKKILDPNMRKRAKK >NC_017374|452278:460790|459781_460261_+|WP_014536283.1|DBSCAN-SWA MYKVADIFCGAGGLSYGFSVHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHCHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLVKPKIFVFENVVGLISMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERV >NC_017374|452278:460790|458137_459067_+|WP_000543247.1|DBSCAN-SWA MHANLFNQNASKKDVFLHNLRSNNGRYKRYVKAPLRYGGGKSLAVGLIVECIPNGVRRVISPFIGGGSVEIACTTELGLEVLGFDIFDILVNFYQALLKDKQALYDNLLSLEPNQETYSIIKQELKAHYKKECVLDPLILARDYYFNFNLSYGPGFLGWMSKIYTDKERYLNALLKIKDFNAPSLKVECSSFEEVLLAYPNDFFYLDPPYVLENSKMFKGIYPMRNFPIHHNGFKHEVLAHMLKRHKGPFILSYNDCELVRNAYKDFKILEPSWQYTMGQGEIRMGKNRLERGDNNHVKQSHELLIIKE >NC_017374|452278:460790|455428_456277_+|WP_001216796.1|DBSCAN-SWA MRIACLLALGDNLITLSLLKEIALKQQQPLKILGTHLTLKIAKLLECEKHFEIIPLFENIPAFYDLKKQGVFGAMKDFLWLLKALKKHKVKHLILEKQDFRSALLAQFIPITTPNKEIKNVYQNRQELFSQIYGHAFDNPLYPMSVKNPKKILINPFTRENDRNISLEHLKIVLKLLKPFCVTLLDFEERYVFLKDEVTHYRAKTSLEEVKNLILESDLYIGGDSFLIHLAYYLKKNYFIFFYRDNDDFMPPNGGNENFLKAHKSHFIEQDLAKKFRHLGLL >NC_017374|452278:460790|452278_453670_-|WP_000053293.1|tRNA|DBSCAN-SWA MSLIVTRFAPSPTGYLHIGGLRTAIFNYLFARANQGKFFLRIEDTDLSRNSIEAANAIVEAFKWVGLEHDGEILYQSKRFEIYKEYIQKLLNEDKAYYCYMSKDELDALREEQKARKETPRYDNRYRDFKGTPPKGIEPVVRIKVPQNEVIVFNDGVKGEVRVNTNEIDDFIIARSDGTPTYNFVVTIDDALMGITDVIRGDDHLSNTPKQIILYKALNFKIPNFFHVPMILNEEGQKLSKRHGATNVMDYQEMGYLKEALVNFLVRLGWSYQDKEVFSMQELLEWFDPKDLNSSPSCFSWHKLNWLNAHYLKNQSAQELLKLLKPFSFSDLSHLNPAQLDRLLDALKERSQTLKELALKIDEVLTAPIEYEEKVFKKLNQALVMPLLEKFKLALDKTDFNDESALENAMHQIIEEEKIKAGSFMQPLRLALLGKGGGIGLKEVLFILGKTESVKRIEAFLKS >NC_017374|452278:460790|459069_459399_+|WP_014533955.1|DBSCAN-SWA MHISGVKTAFKIAGVEYAKDSTKLNFNYLKDLKDENNQSLSQNILTQNVARVYLIVVDGEIKKIGGSQADGGIKSTLNIYKDGESKGGLVLEVLACGIFFITQYLQGLK >NC_017374|452278:460790|460265_460790_+|WP_080005650.1|DBSCAN-SWA MKTHFSLKDALGDLPPIQSGENGDALGYLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPESLRPKSGYINTYAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSASAKRLQIGNAVPPLLSVVLAHAVFDFLRGKNV |
8 | Escherichia_phage(16.67%) | tRNA | NA |
Homologous phage analysis in the prophage regionThe bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')
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| Acr ID | Acr position | Acr size | Homology with known anti | Neighbor HTH/AcRanker | Neighbor Aca | In prophage | Protospacer in prophage |
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