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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_015184 Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence 0 crisprs csa3 0 0 0 0
NC_015508 Agrobacterium sp. H13-3 chromosome linear, complete sequence 0 crisprs WYL,DEDDh,csa3 0 0 2 0
NC_015183 Agrobacterium sp. H13-3 chromosome circular, complete sequence 1 crisprs DEDDh,cas3,WYL,csa3 0 0 5 0

Results visualization

1. NC_015183
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015183_1 2673108-2673209 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 892159 : 898907 9 Geobacillus_phage(33.33%) tail,capsid,portal,head,protease NA
DBSCAN-SWA_2 1415720 : 1471380 63 Rhizobium_phage(23.81%) tail,capsid,integrase,portal,head,tRNA,terminase attL 1411472:1411486|attR 1447055:1447069
DBSCAN-SWA_3 1622867 : 1631016 8 uncultured_Mediterranean_phage(66.67%) tRNA NA
DBSCAN-SWA_4 1647118 : 1655555 9 uncultured_Mediterranean_phage(75.0%) tRNA NA
DBSCAN-SWA_5 1741586 : 1769039 33 Morganella_phage(20.0%) tail,capsid,head,holin,terminase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_015508
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 8582 : 53632 38 Lactococcus_phage(16.67%) plate,transposase NA
DBSCAN-SWA_2 252402 : 260813 7 Enterobacteria_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage