CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_015386	Treponema succinifaciens DSM 2489 plasmid pTRESU01, complete sequence	0 crisprs	NA	0	0	1	0
NC_015385	Treponema succinifaciens DSM 2489, complete sequence	1 crisprs	WYL,PrimPol,csx1,DinG,csa3,DEDDh,cas2,cas1,csx20,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	0	0	3	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1305 : 29604

Streptomyces_phage(50.0%)

plate,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013702676.1\|1305_4272_+\|plate	baseplate J/gp47 family protein	NA	NA	NA	NA
WP_013702677.1\|4274_4769_+	hypothetical protein	NA	NA	NA	NA
WP_013702678.1\|4785_5991_+\|tail	phage tail sheath family protein	A0A1J0GW47	Streptomyces_phage	8.4e-36	32.5
WP_013702679.1\|6045_6474_+\|tail	phage tail protein	NA	NA	NA	NA
WP_013702680.1\|6518_7817_+	hypothetical protein	NA	NA	NA	NA
WP_148228344.1\|7876_8215_+	hypothetical protein	NA	NA	NA	NA
WP_013702682.1\|8217_8625_+	DUF1257 domain-containing protein	NA	NA	NA	NA
WP_013702683.1\|8615_9428_+\|tail	phage tail protein	NA	NA	NA	NA
WP_013702684.1\|9437_11441_+	hypothetical protein	NA	NA	NA	NA
WP_013702685.1\|11437_11575_+	hypothetical protein	NA	NA	NA	NA
WP_013702686.1\|11575_15064_+	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA
WP_013702687.1\|15060_16170_+	SH3 domain-containing protein	NA	NA	NA	NA
WP_013702692.1\|19354_20359_+	M23 family metallopeptidase	NA	NA	NA	NA
WP_013702693.1\|20355_21522_+	SH3 domain-containing protein	NA	NA	NA	NA
WP_169309779.1\|21522_21693_+	hypothetical protein	NA	NA	NA	NA
WP_013702695.1\|22292_23231_-	hypothetical protein	NA	NA	NA	NA
WP_013702696.1\|23230_24034_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_013702697.1\|24033_24396_-	HTH domain-containing protein	NA	NA	NA	NA
WP_013702698.1\|24572_26093_+	hypothetical protein	NA	NA	NA	NA
WP_013702699.1\|26108_26477_+	FHA domain-containing protein	NA	NA	NA	NA
WP_013702700.1\|26487_27645_+	VWA domain-containing protein	NA	NA	NA	NA
WP_041612501.1\|27645_29139_+\|tail	phage tail sheath family protein	J9PVC2	Bacillus_phage	2.0e-39	26.6
WP_148228345.1\|29160_29604_+\|tail	phage tail protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_015385

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CRISPR-Cas detection and classification

Crispr_ID: NC_015385_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_015385_1

2333605-2335521

TypeIII

Consensus_repeat	Method
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	PILER-CR
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	CRISPRCasFinder
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAAN	CRT

25 spacers

csx1,cas2,cas1,csx20,csm5gr7

The CRISPR arrays of NC_015385_1

>merge|NC_015385|1|2333605-2335521|PILER-CR,CRISPRCasFinder,CRT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAATGGGCTCTTCCAGAGCTAAAGGTTGTCGTTCTTAACGACGAGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAATGCATTCCCAACATACAATATCAGTCTCTCAAGAGACGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAATTGACAAGGCTTTGAAATTTCAAGGTCATGTATCAGACCGGCTGGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAATATATTCATAATATAAAGATTTTCGGAGGTAAGAAGATGGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAATTTTCAACTTAGAAAGGGGAAAGGTTCCCTTTAGGGTATTATTGGTCTTAATCCTTAAATCAGGTCTATGTTTTTAACAAGACCAGTATTGCCTTGGGACTCTTACTCCAGTTCGTGAGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAAAAAGAACCGAACCGCAGATTTTTAACTATCTCTGTCTTCATGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAAAGAAAGCAAGAGGCGCAAACTCGACAAGAGATATAAAAATGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAATTGACAAGGCTTTGAAATTTCAAGGTCATGTATCAGACCGGCTGGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAATATATTCATAATATAAAGATTTTCGGAGGTAAGAAGATGGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAATTTTCAACTTAGAAAGGGGAAAGGTTCCCTTTAGGGTATTATTGGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAACAAGACCAGTATTGCCTTGGGACTCTTACTCCAGTTCGTGAGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAAAAAGAACCGAACCGCAGATTTTTAACTATCTCTGTCTTCATGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAAAGAAAGCAAGAGGCGCAAACTCGACAAGAGATATAAAAATGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAAACAGGAAAATCAACTTTGATTGCTATGCCGCATAAAAGCGGGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAATTTTAGTCGCTCACCGTATAAGTGATTGGGAAAATTTGATGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAATAAAACGACAGGGACATCAAAGGATGAGCTGACAAAAGTAAGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAAAAGGTAAAGCGCGCTTTGACCTTGTTGAGCCGGAGTTTGAGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAATCATATCTCTTAATAGAGAGACAAAGCCTGTTGCGGAAAGCAAGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAAGCGGGACAAGCCTCATGAATAAGAAGGAGCACGACGCCTACTGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAATTATGGGAGGCAAGGAGTATAATATGAATGAAAAGTTGAATGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAATTTGATGAATAAGAAGGAGCATGACGCTTATTTGCAGTGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAATGATTATGGCATTCCCAGTATATCAGATTTCTCTTTCAAGAGGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAACTTGTCGTGTTGAATGATAGCAAGAATATACATTTTGTAGATTCGGTCTTAATCCCTTAAATCAGGTCTATGTTTTTATCGCCCAGTTCGCGGAGGAAGATGATGGCACTGAATGTGTCTTTCGGTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA

>NC_015385|1|1|2333605-2335521|PILER-CR
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TGGGCTCTTCCAGAGCTAAAGGTTGTCGTTCTTAACGACGA
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TGCATTCCCAACATACAATATCAGTCTCTCAAGAGAC
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TTGACAAGGCTTTGAAATTTCAAGGTCATGTATCAGACCGGCTG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TATATTCATAATATAAAGATTTTCGGAGGTAAGAAGATG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TTTTCAACTTAGAAAGGGGAAAGGTTCCCTTTAGGGTATTATTGGTCTTAAT
CCTTAAATCAGGTCTATGTTTTTAACAAGACCAG	TATTGCCTTGGGACTCTTACTCCAGTTCGTGAGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAAAAAGAACCG	AACCGCAGATTTTTAACTATCTCTGTCTTCATGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAAAGAAAGCAA	GAGGCGCAAACTCGACAAGAGATATAAAAATGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAATTGACAAGG	CTTTGAAATTTCAAGGTCATGTATCAGACCGGCTGGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAATATATTCAT	AATATAAAGATTTTCGGAGGTAAGAAGATGGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAATTTTCAACT	TAGAAAGGGGAAAGGTTCCCTTTAGGGTATTATTGGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAACAAGACCAG	TATTGCCTTGGGACTCTTACTCCAGTTCGTGAGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAAAAAGAACCG	AACCGCAGATTTTTAACTATCTCTGTCTTCATGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAAAGAAAGCAA	GAGGCGCAAACTCGACAAGAGATATAAAAATGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAAACAGGAAAA	TCAACTTTGATTGCTATGCCGCATAAAAGCGGGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAATTTTAGTCG	CTCACCGTATAAGTGATTGGGAAAATTTGATGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAATAAAACGAC	AGGGACATCAAAGGATGAGCTGACAAAAGTAAGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAAAAGGTAAAG	CGCGCTTTGACCTTGTTGAGCCGGAGTTTGAGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAATCATATCTC	TTAATAGAGAGACAAAGCCTGTTGCGGAAAGCAAGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAAGCGGGACAA	GCCTCATGAATAAGAAGGAGCACGACGCCTACTGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAATTATGGGAG	GCAAGGAGTATAATATGAATGAAAAGTTGAATGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAATTTGATGAA	TAAGAAGGAGCATGACGCTTATTTGCAGTGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAATGATTATGG	CATTCCCAGTATATCAGATTTCTCTTTCAAGAGGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAACTTGTCGTG	TTGAATGATAGCAAGAATATACATTTTGTAGATTCGGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTATCGCCCAGTT	CGCGGAGGAAGATGATGGCACTGAATGTGTCTTTCGGTCTTAATC
CCTTAAATCAGGTCTATGTTTTTAA

>NC_015385|1|1|2333605-2335521|CRISPRCasFinder
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TGGGCTCTTCCAGAGCTAAAGGTTGTCGTTCTTAACGACGA
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TGCATTCCCAACATACAATATCAGTCTCTCAAGAGAC
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TTGACAAGGCTTTGAAATTTCAAGGTCATGTATCAGACCGGCTG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TATATTCATAATATAAAGATTTTCGGAGGTAAGAAGATG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TTTTCAACTTAGAAAGGGGAAAGGTTCCCTTTAGGGTATTATT
GGTCTTAATCCTTAAATCAGGTCTATGTTTTTAA	CAAGACCAGTATTGCCTTGGGACTCTTACTCCAGTTCGTGA
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	AAAGAACCGAACCGCAGATTTTTAACTATCTCTGTCTTCAT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	AGAAAGCAAGAGGCGCAAACTCGACAAGAGATATAAAAAT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TTGACAAGGCTTTGAAATTTCAAGGTCATGTATCAGACCGGCTG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TATATTCATAATATAAAGATTTTCGGAGGTAAGAAGATG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TTTTCAACTTAGAAAGGGGAAAGGTTCCCTTTAGGGTATTATTG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	CAAGACCAGTATTGCCTTGGGACTCTTACTCCAGTTCGTGA
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	AAAGAACCGAACCGCAGATTTTTAACTATCTCTGTCTTCAT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	AGAAAGCAAGAGGCGCAAACTCGACAAGAGATATAAAAAT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	ACAGGAAAATCAACTTTGATTGCTATGCCGCATAAAAGCGG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TTTTAGTCGCTCACCGTATAAGTGATTGGGAAAATTTGAT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TAAAACGACAGGGACATCAAAGGATGAGCTGACAAAAGTAA
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	AAGGTAAAGCGCGCTTTGACCTTGTTGAGCCGGAGTTTGA
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TCATATCTCTTAATAGAGAGACAAAGCCTGTTGCGGAAAGCAA
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	GCGGGACAAGCCTCATGAATAAGAAGGAGCACGACGCCTACT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TTATGGGAGGCAAGGAGTATAATATGAATGAAAAGTTGAAT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TTTGATGAATAAGAAGGAGCATGACGCTTATTTGCAGT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TGATTATGGCATTCCCAGTATATCAGATTTCTCTTTCAAGAG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	CTTGTCGTGTTGAATGATAGCAAGAATATACATTTTGTAGATTCG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAT	CGCCCAGTTCGCGGAGGAAGATGATGGCACTGAATGTGTCTTTCG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA

>NC_015385|1|1|2333605-2335521|CRT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TGGGCTCTTCCAGAGCTAAAGGTTGTCGTTCTTAACGACGA
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TGCATTCCCAACATACAATATCAGTCTCTCAAGAGAC
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TTGACAAGGCTTTGAAATTTCAAGGTCATGTATCAGACCGGCTG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TATATTCATAATATAAAGATTTTCGGAGGTAAGAAGATG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TTTTCAACTTAGAAAGGGGAAAGGTTCCCTTTAGGGTATTATTG
GTCTTAATCCTTAAATCAGGTCTATGTTTTTAAC	AAGACCAGTATTGCCTTGGGACTCTTACTCCAGTTCGTGA
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	AAAGAACCGAACCGCAGATTTTTAACTATCTCTGTCTTCAT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	AGAAAGCAAGAGGCGCAAACTCGACAAGAGATATAAAAAT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TTGACAAGGCTTTGAAATTTCAAGGTCATGTATCAGACCGGCTG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TATATTCATAATATAAAGATTTTCGGAGGTAAGAAGATG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TTTTCAACTTAGAAAGGGGAAAGGTTCCCTTTAGGGTATTATTG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	CAAGACCAGTATTGCCTTGGGACTCTTACTCCAGTTCGTGA
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	AAAGAACCGAACCGCAGATTTTTAACTATCTCTGTCTTCAT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	AGAAAGCAAGAGGCGCAAACTCGACAAGAGATATAAAAAT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	ACAGGAAAATCAACTTTGATTGCTATGCCGCATAAAAGCGG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TTTTAGTCGCTCACCGTATAAGTGATTGGGAAAATTTGAT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TAAAACGACAGGGACATCAAAGGATGAGCTGACAAAAGTAA
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	AAGGTAAAGCGCGCTTTGACCTTGTTGAGCCGGAGTTTGA
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TCATATCTCTTAATAGAGAGACAAAGCCTGTTGCGGAAAGCAA
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	GCGGGACAAGCCTCATGAATAAGAAGGAGCACGACGCCTACT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TTATGGGAGGCAAGGAGTATAATATGAATGAAAAGTTGAAT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TTTGATGAATAAGAAGGAGCATGACGCTTATTTGCAGT
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	TGATTATGGCATTCCCAGTATATCAGATTTCTCTTTCAAGAG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA	CTTGTCGTGTTGAATGATAGCAAGAATATACATTTTGTAGATTCG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAT	CGCCCAGTTCGCGGAGGAAGATGATGGCACTGAATGTGTCTTTCG
GTCTTAATCCCTTAAATCAGGTCTATGTTTTTAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_015385.1\|WP_013702296.1\|2330490_2331282_-\|hypothetical-protein	unknown	unknown	unknown
NC_015385.1\|WP_013700687.1\|2332354_2333485_-\|ISAs1-family-transposase	unknown	unknown	gnl\|CDD\|379382
NC_015385.1\|WP_013702288.1\|2320012_2321629_-\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|224302
NC_015385.1\|WP_013702305.1\|2338493_2338883_-\|hypothetical-protein	csx20	cls000023_csx20_CAS-I:CAS-III	unknown
NC_015385.1\|WP_013702303.1\|2337680_2338172_-\|DUF3990-domain-containing-protein	unknown	unknown	gnl\|CDD\|379042
NC_015385.1\|WP_013702289.1\|2321854_2323615_+\|phosphoglucomutase	unknown	unknown	gnl\|CDD\|224034
NC_015385.1\|WP_013702300.1\|2336072_2336348_-\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NC_015385.1\|WP_013702306.1\|2338894_2340016_-\|DUF1887-family-protein	csx1	pfam09002_csx1_CAS-III	gnl\|CDD\|312526
NC_015385.1\|WP_041612067.1\|2324535_2326317_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379049
NC_015385.1\|WP_013702295.1\|2329303_2330080_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|277349
NC_015385.1\|WP_013702302.1\|2337468_2337684_-\|hypothetical-protein	unknown	unknown	unknown
NC_015385.1\|WP_013702297.1\|2331300_2331921_-\|TM1812-family-CRISPR-associated-protein	csx1	cls001403_csx1_CAS-III	gnl\|CDD\|378186
NC_015385.1\|WP_013702292.1\|2326465_2327158_+\|hypothetical-protein	unknown	unknown	unknown
NC_015385.1\|WP_013702294.1\|2327410_2329150_-\|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl\|CDD\|236992
NC_015385.1\|WP_013702299.1\|2335771_2336065_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_015385.1\|WP_013702308.1\|2341521_2342601_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	mkCas0182_csm5gr7_CAS-III-A	gnl\|CDD\|273863
NC_015385.1\|WP_013702290.1\|2323618_2324458_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|319818
NC_015385.1\|WP_013702304.1\|2338171_2338390_-\|DUF3791-domain-containing-protein	unknown	unknown	gnl\|CDD\|372250
NC_015385.1\|WP_013702301.1\|2336344_2337445_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NC_015385.1\|WP_013702307.1\|2340028_2341501_-\|putative-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|225420

Protein	Function_ID	Function_description	E-value
NC_015385.1\|WP_013700687.1\|2332354_2333485_-\|ISAs1-family-transposase	gnl\|CDD\|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	1.20897e-23
NC_015385.1\|WP_013702288.1\|2320012_2321629_-\|lysine--tRNA-ligase	gnl\|CDD\|224302	COG1384, LysS, Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis].	0
NC_015385.1\|WP_013702303.1\|2337680_2338172_-\|DUF3990-domain-containing-protein	gnl\|CDD\|379042	pfam13151, DUF3990, Protein of unknown function (DUF3990). A family of uncharacterized proteins found by clustering human gut metagenomic sequences.	2.87185e-58
NC_015385.1\|WP_013702289.1\|2321854_2323615_+\|phosphoglucomutase	gnl\|CDD\|224034	COG1109, {ManB}, Phosphomannomutase [Carbohydrate transport and metabolism].	2.83593e-47
NC_015385.1\|WP_013702300.1\|2336072_2336348_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	8.28669e-31
NC_015385.1\|WP_013702306.1\|2338894_2340016_-\|DUF1887-family-protein	gnl\|CDD\|312526	pfam09002, DUF1887, Domain of unknown function (DUF1887). This domain is found in a set of hypothetical bacterial proteins.	2.22407e-24
NC_015385.1\|WP_041612067.1\|2324535_2326317_-\|AAA-family-ATPase	gnl\|CDD\|379049	pfam13173, AAA_14, AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	1.98659e-08
NC_015385.1\|WP_013702295.1\|2329303_2330080_-\|hypothetical-protein	gnl\|CDD\|277349	cd07404, MPP_MS158, Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	0.0066451
NC_015385.1\|WP_013702304.1\|2338171_2338390_-\|DUF3791-domain-containing-protein	gnl\|CDD\|372250	pfam12668, DUF3791, Protein of unknown function (DUF3791). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 71 and 125 amino acids in length.	2.01736e-20
NC_015385.1\|WP_013702297.1\|2331300_2331921_-\|TM1812-family-CRISPR-associated-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	7.41329e-05
NC_015385.1\|WP_013702294.1\|2327410_2329150_-\|energy-dependent-translational-throttle-protein-EttA	gnl\|CDD\|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
NC_015385.1\|WP_013702299.1\|2335771_2336065_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.60378e-20
NC_015385.1\|WP_013702308.1\|2341521_2342601_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|273863	TIGR01899, cas_TM1807_csm5, CRISPR type III-A/MTUBE-associated RAMP protein Csm5. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm5, for CRISPR/cas Subtype Mtube, protein 5.	1.49365e-10
NC_015385.1\|WP_013702290.1\|2323618_2324458_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.62584e-65
NC_015385.1\|WP_013702301.1\|2336344_2337445_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	2.25495e-97
NC_015385.1\|WP_013702307.1\|2340028_2341501_-\|putative-DNA-binding-domain-containing-protein	gnl\|CDD\|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	2.19463e-70

>NC_015385.1|WP_013700687.1|2332354_2333485_-|ISAs1-family-transposase
MLLRESLEEIDDFRVKRCRKFELADIFLLVLFGLLSGIKDIEHIAEWAEEAEESIKGLVKFEFGPPSADTILRVFRNVNADKIEKVFIKWAHGIYEKVKIEPDRTIVAIDGKTMCGSNKVTGAKGIHIVSAWADELSLILGQVKTDEKSNEITAIPELLELIDIRGMIITIDAMGCQKKICEKIKEKKADYVLSLKGNQSTTHEAVKDFFSMDEKELAKYGVIKSEKECNPDHGRIENRQYYLCTNLSWLENKDEWPGLKAVAMAREERTVNGKTSTDIRFFLTSLDNIELVKKSIRLHWGIENRLHWCLDMTFNEDYKRHRKDHSPENMTVMRRLALNILRQAEKPENKKQDSLSKRTIWFRENRQFRQTVLRLL
>NC_015385.1|WP_013702297.1|2331300_2331921_-|TM1812-family-CRISPR-associated-protein
MKKIVFATIPMQEIKEGIVYKSEENKVIEYEKPVLFTVDSLLAKTLEKGDEVKVVRIVTEGKFSDDNLKLQKDELDKINSEIGADISYVEVREAYRETNQVLHSRFRQLVNSLETGCEIYTDMTFGPKTLTPVLFYVLGFAEKFFDADIKNIVYGKVAFDKNKHPVPDTAEIFDVTSLYYLNSMASVMKAPDGASALAMLNTLFEL
>NC_015385.1|WP_013702296.1|2330490_2331282_-|hypothetical-protein
MEDSKSKEENPVNLLCKKFFTPELCDGPVTETPAALKNKAFAELLSYGDEICRKKFRGKEDLLCVEIVKTIEACWNSWKKSPCASSYSGYFYKALCNNLAKVCVQKDDEFKAMSFDSSVDKYGEPVTLLDFEPDDETASLDDKIDNDSKLDKLLDGIEIYTRAVRTDVRKSLCVMFTYRILDDAEFPDSGWIEEKHEKYCFINMELAGDYFAKQKVAKSENKKFKYTQKDVSKLFGIPEKTLSDRSRKIDSFFDSLRNNEQCL
>NC_015385.1|WP_013702295.1|2329303_2330080_-|hypothetical-protein
METKTTRIGMETEIDKNLKTLAETKATCYCLRETGQCDSDDCLACSKLSLYQQGVRNLLPVDLLKIDNLATKIIQRKLDNDISFRATSASRWKYFFNCLKWMAIVFLFTIFIPLAAAYFLCTYALDTKGAVYPIIDDETESKVFRVLNETHRNVYDMNNDHEVNCQDFTVMFVYLWAKIYPDDSRAAQIVFNRNFNTGMNHLFVSVQSGKKIFYIEPQGNSVCYRMEHFWGNKYDPGFNREITKSFWYKQMGLPYNGE
>NC_015385.1|WP_013702294.1|2327410_2329150_-|energy-dependent-translational-throttle-protein-EttA
MAKTVDDKKIIYTMDRVSRAYGTKVVLKDISISYYYGAKIGVIGENGAGKSSLFKILAGVDNDFTGETHLLPGFTMGYLEQEPQLEAGKTVKEIVMEGVKPITDLLAEFDKVNEAFGDPDADFDKLCARQAELQEKLDAADAWNLDTNLELAMDALRCPPADQVVDVLSGGERRRVALCRLLLQQPDILLLDEPTNHLDAETVAWLERHLRDYKGTIIAITHDRYFLDNVAGWILEMDRGEGYPFKGNYSEWLEAKEKRLEQEEKQASVRQREMKEELEWIHAGAKGRQAKHKEHITKYEQLLAEEQKRVQLKDSQISIPAGPRLGSLVIEASGLTKSFGDKLLFENLDFAIPAGAVVGVVGPNGAGKTTLFKMLAKATTGEGEETPDSGTIKVGDTVKLVYVDQMRSKLDPNKTVLELLSGGADLIKLGAVDEKGRPVNGALREVNAHAYCSWFNFNGAEQNKKISVLSGGEKNRLNMGLMFKEAGNVLLLDEPTNDLDISTTRSLEEAINSFAGCVLVISHDRYFLDRICTHILAFENNSEVKWFEGNWSEYVEWKKNVLGIDDDHPHKTMYRKLTR
>NC_015385.1|WP_013702292.1|2326465_2327158_+|hypothetical-protein
MKTLKKLIIIFTSMFMLAALLSCDDGGCVESQAGEVSPKSEWHIIHLSDVSLGCEYKIELAENLKTEYNSLNINNISGVLPNKYKFFYTSEDIKKMTDAGYDCHYGFAMTSAELKESFQYSNSDDLYLNDVFKTPEKDVKIYYGIYKLSDDIKEIQGVILTEETRTPAQFSQEKKISNTTYNTNIDNAIYEFKGHLTVTTVIETQDIDTASEKRTCYPGTITITSIVPKN
>NC_015385.1|WP_041612067.1|2324535_2326317_-|AAA-family-ATPase
MNDIEELRKKMESLPAGGITAKTIKGKKYLYYQWTENGRQFSRTVKEKEAELLKAQIEERKFLQEKLKEMRNSKIPVSSAMIKKVNAYNCDVRIGESLKIFAASVSSYKKRYIYEVIKNFIYNETHDKVFILYGLRRTGKTTLVRQIIYNMLESNFSKSVFIQINSNNTLSDVNKDLKVLEAKGYKYVFIDEVTLMDDFIDGAALFSDVFATSGMKIVLSGTDSLGFIFSEDEQLYDRCILLHTTFIPFREFYDVLGIQSIDEYIKYGGTMSRSGENYNNLIFGTKQSTDEYVNTAIARNIQHSLKNYQYEDHFRNLYELYEKHELTNVINRIVEDMNHRFTIDVLTRDFKSHDFGLAQRNVRNDRNNPTDILDTVNKPKFLKNLMKALEILNKQNQTVEIKDVHRKEIKEYLDMLDLTCDIPVVSMTDLNNRVFFTVFTQPGLRYSQAESLIKSLMMDDIFKNISAIDRKRITDKILDDVKGRILEEIVLLETKKANPEKDIFKLKFAVGEFDMVVYDSENVNCKIYEIKHSKEISKEQYHHLVDTRKCEQTEFRYGKILSKVVLYRGKNSETEEGILYRNVEEYLLELGKH
>NC_015385.1|WP_013702290.1|2323618_2324458_-|Cof-type-HAD-IIB-family-hydrolase
MAKLPSYALDVRLIALDLDDTLLDSNRKISDKNVQVLQECVRRGIYVVLCSGRAEDGILPFVRRMDIAGSEFGKFIIAINGCSVFDMHERKQIYTCSVDSSVLLKANSEAEKMGLRSEVYSPDTIFYAEETPWTRKDVDMCGLKGKVIDDYETFLREKKFPKMLVPGEPETLQVLQKKLKDELGDSAVIFTSKPYFLEILPPNCGKGESINWLADYIGIPRSSTMGFGDSMNDESMIAKCGYGVCMSNGIDYIKNAADFITEKDNDSSGVGDFIEKYVL
>NC_015385.1|WP_013702289.1|2321854_2323615_+|phosphoglucomutase
MILSASGWRKVFAESMDAEDTSPKIGEANSFLCLLIAETFAEYIISKTGKKDPAVVVATDTRPTGKEIALNVIQGLCACGIKVVFLGTAAAPEIMAYSKKHDGFLYISASHNPIGHNGIKFGLNNGGVFEAGESKKLAENFAAKCSSAGAEEHALSLAFKAQKTQVENVYAKCAKYKKKSLAAYEKFIKTVIAGSPKILFQHKLFSILKKAAQKNPLSIVCDMNGSARATSIDKKFIPESGIGFIPFNEDKIVHAIIPEPENLVHCAQKINELQKEGNKSALLGYMPDCDGDRGNIVYWNGKEAKTVPAQEVFALCVMSELAFEYWKNPDAKNLAVAVNCPTSMRIDEICASLNAKLFRAEVGEANVVNLAREKRSEGFNVRIFGEGSNGGNITYPSAVRDPVATIFALVKLLALRDTKNKIGLFHLWCKMSGQEKKYKDNFTLDDVISTLPEYTTTGVSESRAVLQVKMQDKGKLKENFKKEFISSWEEKKEQLKNEYGIASYEAFTTNGTKETAADQNWNNANGGLKVKFMDSENQPVAFIWMRPSGTEPVFRIMCDVKGNGTQEEKALLEWETELLQKADIES
>NC_015385.1|WP_013702288.1|2320012_2321629_-|lysine--tRNA-ligase
MSERNEKELCHWADQQASRIIKQKGDLDLYTCASGITPSGTVHIGNFREIITVDLIVRALRDRGKNVRFIYSWDDYDVFRKVPGNMPQPEVLEKYLRYPITMVPDTFGRDENYARHHEVDIETQLPRVGIHPEFLYQASRYRANRYAEGMKKALQNRELIKECLNEYRDEQHKMKPEDVYWPVAAFCCKCNKDETEILGYDGEYGVTYKCKACGHEEKGDLRTSKEFKLGWRVDWPMRWNEEKVVFEPGGKDHISPGGSYDTAKLVSKKVFGWDAPVTMKYDFVKLKGVPGKMSSSKGKVISLVDALEVYQPEVLRYIFAMNKVDHEFSISFDLDVVTIYEAYDKTERIAWGIDKAKNEDLFLKEKRIYELSQIENGMPKVQPYQIGFRLLTTLLQTYSGDIDAVIASLKDVKEEQKETLRRRCVCAWYWIKESAPDCAPDFCFTLREDGSKAEDISGEMLTAVRRVRDEVVPRLDTFAVDKECQQAMYDIATELGLESKALFTALYHALIGKDQGPRLASFFRIIGKEKLQKILSVY
>NC_015385.1|WP_013702299.1|2335771_2336065_-|CRISPR-associated-endonuclease-Cas2
MEKHWLIVYDIRDTKRLAKISKCVESYGWRVQKSVFESTASDETIGQLKSRLEKLMDIEEDFVLFFEVCERDFQKKQIFGKNIEKDDKITDEDFVIL
>NC_015385.1|WP_013702300.1|2336072_2336348_-|CRISPR-associated-endonuclease-Cas2
MIYFISYDVSNPKRLNKVAKTLENFGIRIQFSFFECEMEREQLEELKSALLKIINKKEDSLRIYPLCQDCAAKTTSLGNGNIFIPKTFEIL
>NC_015385.1|WP_013702301.1|2336344_2337445_-|CRISPR-associated-endonuclease-Cas1
MSEIYILSDYGKLSKKDETIVFSQPDGTSTILFPFKTEHLVLVGKVSISADALRLLTKYKIGTTFLSSNGRFNGKLSFGDGKNIFLRQKQFRILDNPQKSLEIAKSIVSGKIRNEISFMQRIKRKNSNENEAVENAISSVKNTLSNAEKTDDIEKLRGYEGLAARKYFEVFKFNLQDEWAEFKTRSKNPPRTNVNAVLSFLYTLLMYRVESAIESQGLDSCCGNLHAVNYGKTALVFDLMEEFRSPVCDSVCCSLFNLGTLKSEDFEKKEFSAESEDYPLELEQGKGDSDSNLGDEENSPAKYGILLTKAGIKKVISAFEAKMNSLILYSPTAQKISYTKIIYQQVQHYKRVICGEETEYKAYYFK
>NC_015385.1|WP_013702302.1|2337468_2337684_-|hypothetical-protein
MIRPKVTQKNVHLFIPGKVSKICSELARKENLSLNESILKFYNSAAYETLSRESSKLWQEGWVYVYQMMNG
>NC_015385.1|WP_013702303.1|2337680_2338172_-|DUF3990-domain-containing-protein
MKIYHGGFLEVSCPRILEPSRAMDFGNGFYTTTSFNQAKKWSLIKKDRFHYEKAVVSAFEVDNEIFKTAKIKSKVFPKADEEWLDFVMANRQDIHFVYDYDVVMGAVANDNVYASLNLYEDGFLSKKELLDELIAWKYVDQICFHTEKSLNYLEFIKSEEVFQ
>NC_015385.1|WP_013702304.1|2338171_2338390_-|DUF3791-domain-containing-protein
MSDELFQKKAEFLSWCIEEYAAEKNLNGRDVANLFSQKKVLDFLGEHYDILHTQGKAYIIETIEDFIKTEGE
>NC_015385.1|WP_013702305.1|2338493_2338883_-|hypothetical-protein
MPRTFCLLNHVLTQKQLAELGEKFNSIEVVYPEKNLAELWAQIPPEKSNEEVVGSVVSWLKGESAPGDLFIIQGEFGSTFTLVDFALKNGLVPLYATTRRVAKESRSGETVRREYVFEHVCFKKYQYFE
>NC_015385.1|WP_013702306.1|2338894_2340016_-|DUF1887-family-protein
MKETILVNLVSEQTIPNVQFIKWYFNKKQTPMKILLVSTKEMEQKEKSLFIKNALHFSDSFVEWETIHTDGNDISKTENILTDYFRDNEYKNIIVNITGGTKIMSLAAFDFFNNKPNTEIFYQPIGKELQELYPNKQKYDMFEVLSLKEYLDAHGISYKYDNECVKDWNYNKTVYDLCVADNRELIKGMIALQNNSYFNNVYKRKDFLDFTQIEEEKFIAINHPAATKENMIKILQIFGFDVSRIEHKHIRYITGGWFEEYVYQKICNEYHNVDEKNVALNVTIQKGNDKNELDVIYLDKDNKLHVIECKSFVDGNEGNRVLNDALYKLQAIIKSKFGLYVKQHLYTKSIIEKETPLNRAKEFGIDIKDGTQL
>NC_015385.1|WP_013702307.1|2340028_2341501_-|putative-DNA-binding-domain-containing-protein
MTPNTILKKIKLGETVTQEFKRCGNGIHSDVYETVCSFLNRFGGDIFLGVDDDGNIEGVPENAVRDLTRNFINCLNNPSLFNPVCTATIEPISVDEKIVLWVYVPNASQVYSFKGKVYDRQGDSDIVVTSTDKIAEMYIRKQNIFTERRVFPYLKLENLREDVFQKARQLAYNRNSNHSWMKMDNMQLLKSTGLYTHDYATNEDGLTLAAALLFGQDEVIQDICPTYWTDALCRKIDTDRYDDREIIQTNLIDSVDLLMQFAKKHTSDKFYLDENMQSISLRSNICREMIVNCLIHREFTSGRISKFVIEKDRMYVENPNKAQNKGKLTPENIEPFPKNPCISKVFREITYSEELGSGFIKLNKFVPLYSGKNIRPEFIDGDMFRIVVPLGEMGENADVQNFDKNMNDGKQINCGENCGENCGENCGENISAEEKILDAIRENPKITQRRLAAVTGLTLRGVEWNMAKLKNEGKIRRLGSDKKGTWEIVE
>NC_015385.1|WP_013702308.1|2341521_2342601_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MKEIYKIKIEPMTAVHIGSGNTLSPLDYKLANTSSGKRKYVRFSSDSILNRVATDEKLRNEFEMFSLNSDMKSLQSFFHKNMKNEDVSYLCLPTKEFEEKYDENLKKDPLQNACEVLEMYRPSLKSFPGIPGSSIKGAIRTALVDSCVKDVESGFDFYTAKKNRNFENQILSNKDAKTDPFRAIHVGDCNFTTPLTQGVGTLQIINGEAGRLSEKNSTQVQAEVLLGKIVSKESVPQLFSLTIDKDLQKTGNVSKRFFIKDIINECNYFYGENFKQEYEYFYKNSDSEKLELIDKLFMEIKNITEKESENSFIIRLGRWSQFEFVTLYDENHKFGASRTVLNYDGQYLPMGWCKCTKVI

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

268631 : 305658

Brochothrix_phage(50.0%)

tRNA,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013700513.1\|268631_269648_+\|tail	phage tail protein	NA	NA	NA	NA
WP_013700514.1\|269648_270371_+	WG repeat-containing protein	NA	NA	NA	NA
WP_013700515.1\|270638_270983_+	hypothetical protein	NA	NA	NA	NA
WP_013700517.1\|272124_272667_+	hypothetical protein	NA	NA	NA	NA
WP_013700518.1\|272635_272995_+	YolA family protein	NA	NA	NA	NA
WP_013700519.1\|273246_273657_+	hypothetical protein	NA	NA	NA	NA
WP_013700520.1\|273753_274668_+\|tail	phage tail protein	D7RWE0	Brochothrix_phage	5.8e-13	36.3
WP_013700521.1\|274667_275156_+	hypothetical protein	NA	NA	NA	NA
WP_013700522.1\|275339_275807_+	hypothetical protein	NA	NA	NA	NA
WP_013700523.1\|275806_276571_+	hypothetical protein	NA	NA	NA	NA
WP_013700524.1\|276640_277597_+\|tail	phage tail protein	NA	NA	NA	NA
WP_013700525.1\|277606_278083_+	hypothetical protein	NA	NA	NA	NA
WP_013700526.1\|278177_278354_+	hypothetical protein	NA	NA	NA	NA
WP_013700527.1\|278539_278923_+	hypothetical protein	NA	NA	NA	NA
WP_013700528.1\|279017_281291_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA
WP_013700529.1\|281814_282984_+	type III PLP-dependent enzyme	NA	NA	NA	NA
WP_013700530.1\|283181_283721_+	hypothetical protein	NA	NA	NA	NA
WP_013700531.1\|283730_284990_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.6e-90	44.9
WP_013700532.1\|285235_287533_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_013700533.1\|288478_289390_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_013700534.1\|289406_289736_-	hypothetical protein	NA	NA	NA	NA
WP_081454731.1\|290159_290678_+\|transposase	transposase	NA	NA	NA	NA
WP_013700536.1\|291339_293079_+	phage late control D family protein	NA	NA	NA	NA
WP_013700537.1\|293099_293621_+	hypothetical protein	NA	NA	NA	NA
WP_013700538.1\|293617_294172_+	hypothetical protein	NA	NA	NA	NA
WP_013700542.1\|296395_296950_+	hypothetical protein	NA	NA	NA	NA
WP_174255855.1\|298632_299370_+	prealbumin-like fold domain-containing protein	NA	NA	NA	NA
WP_013700545.1\|299385_300531_+	DUF3289 family protein	NA	NA	NA	NA
WP_148228230.1\|300541_301033_+	hypothetical protein	NA	NA	NA	NA
WP_013700547.1\|301200_301827_+	hypothetical protein	NA	NA	NA	NA
WP_013700548.1\|301823_303041_+	chromosome condensation regulator RCC1	NA	NA	NA	NA
WP_148228300.1\|303202_304006_+	hypothetical protein	NA	NA	NA	NA
WP_013700550.1\|304009_304372_+	hypothetical protein	NA	NA	NA	NA
WP_013700533.1\|304746_305658_-\|transposase	IS1595 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

713969 : 768242

Burkholderia_phage(18.18%)

integrase,transposase

attL 715693:715743|attR 748646:748696

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013700895.1\|713969_714755_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_013700896.1\|715129_715660_+	hypothetical protein	A0A0R6PJY5	Moraxella_phage	9.1e-19	53.6
715693:715743	attL	NA	NA	NA	NA
WP_013700897.1\|716055_717288_+\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	2.6e-56	42.2
WP_013700898.1\|717468_718260_+	hypothetical protein	NA	NA	NA	NA
WP_013700899.1\|718366_719077_+	hypothetical protein	NA	NA	NA	NA
WP_013700900.1\|719180_719978_+	hypothetical protein	NA	NA	NA	NA
WP_013700901.1\|720082_720724_+	hypothetical protein	NA	NA	NA	NA
WP_013700902.1\|720921_721434_+	NUDIX domain-containing protein	A0A2H4J8B3	uncultured_Caudovirales_phage	4.3e-05	29.1
WP_013700903.1\|721504_721792_+	BrnT family toxin	NA	NA	NA	NA
WP_013700904.1\|721793_722006_+	BrnA antitoxin family protein	NA	NA	NA	NA
WP_013700905.1\|722117_722921_+	hypothetical protein	NA	NA	NA	NA
WP_013700906.1\|723389_723809_+	hypothetical protein	NA	NA	NA	NA
WP_169309733.1\|723815_723965_+	hypothetical protein	NA	NA	NA	NA
WP_013700907.1\|724051_724294_+	hypothetical protein	NA	NA	NA	NA
WP_013700908.1\|724315_725134_+	hypothetical protein	NA	NA	NA	NA
WP_013700909.1\|725322_726444_+	SH3 domain-containing protein	NA	NA	NA	NA
WP_013700910.1\|726616_726952_+	TM2 domain-containing protein	NA	NA	NA	NA
WP_013700911.1\|727016_727277_+	DUF2752 domain-containing protein	NA	NA	NA	NA
WP_013700912.1\|727353_727581_+	DUF2281 domain-containing protein	NA	NA	NA	NA
WP_013700913.1\|727577_727955_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_013700914.1\|728460_728835_-	HU family DNA-binding protein	NA	NA	NA	NA
WP_013700915.1\|729194_729416_+	helix-turn-helix transcriptional regulator	A0A2K5B261	Erysipelothrix_phage	2.4e-13	56.2
WP_013700916.1\|729504_730413_+	DNA adenine methylase	E0YIY3	Lactococcus_phage	4.1e-67	47.4
WP_013700917.1\|730414_731482_+	DNA adenine methylase	A0A2L0UZL7	Agrobacterium_phage	7.2e-39	32.1
WP_013700918.1\|731483_732872_+	hypothetical protein	NA	NA	NA	NA
WP_013700919.1\|732873_734007_+	site-specific DNA-methyltransferase	E5ERN0	Ostreococcus_lucimarinus_virus	2.2e-06	46.4
WP_013700920.1\|734003_736247_+	AAA family ATPase	NA	NA	NA	NA
WP_013700921.1\|736650_737865_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_013700922.1\|738075_740367_+	hypothetical protein	NA	NA	NA	NA
WP_013700923.1\|740524_741388_+	hypothetical protein	NA	NA	NA	NA
WP_013700924.1\|741747_742227_+	hypothetical protein	NA	NA	NA	NA
WP_013700925.1\|742653_743067_+	hypothetical protein	NA	NA	NA	NA
WP_013700926.1\|743183_743795_+	hypothetical protein	NA	NA	NA	NA
WP_013700927.1\|743967_744303_+	TM2 domain-containing protein	NA	NA	NA	NA
WP_013700911.1\|744367_744628_+	DUF2752 domain-containing protein	NA	NA	NA	NA
WP_013700912.1\|744704_744932_+	DUF2281 domain-containing protein	NA	NA	NA	NA
WP_013700913.1\|744928_745306_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_013700928.1\|745478_745931_+	hypothetical protein	NA	NA	NA	NA
WP_013700929.1\|745927_746668_+	NERD domain-containing protein	A0A2R2ZH57	Clostridioides_phage	1.2e-37	38.0
WP_013700930.1\|746762_747560_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_013700931.1\|747761_748430_+	hypothetical protein	NA	NA	NA	NA
WP_013700932.1\|748792_749860_+	acyltransferase family protein	NA	NA	NA	NA
748646:748696	attR	NA	NA	NA	NA
WP_013700933.1\|750018_751113_+	acyltransferase	NA	NA	NA	NA
WP_013700934.1\|751305_751626_+	type III toxin-antitoxin system ToxN/AbiQ family toxin	NA	NA	NA	NA
WP_013700534.1\|751884_752214_+	hypothetical protein	NA	NA	NA	NA
WP_169309734.1\|753514_753784_+	type III toxin-antitoxin system ToxN/AbiQ family toxin	NA	NA	NA	NA
WP_013700936.1\|754147_755362_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_013700937.1\|755550_756249_+	SinI family restriction endonuclease	NA	NA	NA	NA
WP_013700938.1\|756293_757724_-	DNA cytosine methyltransferase	M9UXR6	Escherichia_phage	5.7e-23	28.4
WP_013700939.1\|757788_758457_+	hypothetical protein	NA	NA	NA	NA
WP_013700940.1\|758440_758644_+	hypothetical protein	NA	NA	NA	NA
WP_013700941.1\|760441_761557_+	acyltransferase	NA	NA	NA	NA
WP_013700932.1\|761720_762788_+	acyltransferase family protein	NA	NA	NA	NA
WP_169309735.1\|762899_763604_+	hypothetical protein	NA	NA	NA	NA
WP_013700944.1\|763997_765293_+	DNA (cytosine-5-)-methyltransferase	E5E3X6	Burkholderia_phage	1.3e-138	58.9
WP_013700945.1\|765303_766476_+	type II restriction endonuclease	E5E3X4	Burkholderia_phage	1.3e-33	37.8
WP_013700936.1\|767027_768242_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1199729 : 1213817

Staphylococcus_phage(42.86%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013701329.1\|1199729_1200143_-	ParB N-terminal domain-containing protein	Q331U1	Clostridium_botulinum_C_phage	6.0e-10	34.6
WP_148228266.1\|1200172_1202773_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_013701331.1\|1202977_1204150_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	4.8e-44	35.9
WP_013701332.1\|1204152_1204764_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	7.0e-31	37.4
WP_013701333.1\|1204753_1205968_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	4.0e-102	47.6
WP_013701334.1\|1205997_1206468_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	2.4e-39	54.9
WP_013701335.1\|1206646_1207948_-\|tRNA	histidine--tRNA ligase	A0A2K9L6G5	Tupanvirus	5.9e-43	30.7
WP_013701336.1\|1208098_1208905_+	type III pantothenate kinase	NA	NA	NA	NA
WP_013701337.1\|1208916_1210074_-	N-acetylneuraminate synthase family protein	NA	NA	NA	NA
WP_013701338.1\|1210634_1213817_+\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	4.6e-198	36.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_015386

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_015385

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection