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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_015388 Desulfobacca acetoxidans DSM 11109, complete sequence 17 crisprs cas6,cas5,cas7,cas3HD,cas3,cas2,cas1,WYL,RT,csa3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,csx20,csx1,PrimPol,csx10gr5 4 14 2 0

Results visualization

1. NC_015388
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_1 87673-94209 Unclear ?
89 spacers
cas4,cas6,cas5,cas7,cas3HD,cas3,cas2,cas1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_2 185929-186081 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_3 279225-279338 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_4 279642-279770 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_5 279852-279988 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_6 1075775-1075900 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_7 1341298-1341672 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_8 1440762-1440848 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_9 1488840-1490146 Unclear NA
17 spacers
cas2,cas1,RT,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_10 1577234-1577387 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_11 1934754-1935816 TypeIII NA
14 spacers
cas2,cas1,PrimPol,csx1,csx20

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_12 2013847-2013929 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_13 2531961-2532044 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_14 3066547-3067046 TypeIII NA
6 spacers
cas1,csm3gr7,csm6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_15 3086697-3086809 TypeIII NA
1 spacers
cas10,csm3gr7,csx10gr5,csm6,cas1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_16 3267618-3267715 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_015388_17 3274093-3274191 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_015388_2 2.1|185976|59|NC_015388|CRISPRCasFinder 185976-186034 59 NC_015388.1 209843-209901 0 1.0
NC_015388_2 2.1|185976|59|NC_015388|CRISPRCasFinder 185976-186034 59 NC_015388.1 2744959-2745017 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 209949-210007 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 782527-782585 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 917817-917875 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 941246-941304 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1136030-1136088 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1341673-1341731 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1587906-1587964 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1783113-1783171 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 2386778-2386836 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 2745065-2745123 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 3008016-3008074 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 3282361-3282419 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 189349-189407 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1260589-1260647 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1509657-1509715 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1509771-1509829 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1577228-1577286 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1626585-1626643 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1886555-1886613 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1990798-1990856 0 1.0
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 3226326-3226384 0 1.0
NC_015388_7 7.3|1341567|51|NC_015388|CRISPRCasFinder 1341567-1341617 51 NC_015388.1 209843-209893 0 1.0
NC_015388_7 7.3|1341567|51|NC_015388|CRISPRCasFinder 1341567-1341617 51 NC_015388.1 2744959-2745009 0 1.0
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 189402-189461 0 1.0
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 790904-790963 0 1.0
NC_015388_2 2.1|185976|59|NC_015388|CRISPRCasFinder 185976-186034 59 NC_015388.1 1886441-1886499 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 25404-25462 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 941125-941183 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1214543-1214601 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1214657-1214715 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1492539-1492597 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1587792-1587850 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1783234-1783292 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 2501510-2501568 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 189235-189293 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 833701-833759 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1260361-1260419 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1260475-1260533 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1260703-1260761 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1317452-1317510 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1377387-1377445 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1377501-1377559 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 1990684-1990742 1 0.983
NC_015388_7 7.3|1341567|51|NC_015388|CRISPRCasFinder 1341567-1341617 51 NC_015388.1 1886449-1886499 1 0.98
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 189288-189347 1 0.983
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 782366-782425 1 0.983
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 791011-791070 1 0.983
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 1075266-1075325 1 0.983
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 1075480-1075539 1 0.983
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 1260414-1260473 1 0.983
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 1260528-1260587 1 0.983
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 1317505-1317564 1 0.983
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 1587738-1587797 1 0.983
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 1587852-1587911 1 0.983
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 1783180-1783239 1 0.983
NC_015388_7 7.2|1341453|59|NC_015388|CRISPRCasFinder 1341453-1341511 59 NC_015388.1 2818664-2818722 2 0.966
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 287194-287253 2 0.967
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 782473-782532 2 0.967
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 941192-941251 2 0.967
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 1075373-1075432 2 0.967
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 1214603-1214662 2 0.967
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 1377440-1377499 2 0.967
NC_015388_10 10.1|1577281|60|NC_015388|CRISPRCasFinder 1577281-1577340 60 NC_015388.1 3282307-3282366 2 0.967

1. spacer 2.1|185976|59|NC_015388|CRISPRCasFinder matches to position: 209843-209901, mismatch: 0, identity: 1.0

ggcgtaaaggcgtagtggcgtagtgggcattgcccaccctacaaatacattctgttttt	CRISPR spacer
ggcgtaaaggcgtagtggcgtagtgggcattgcccaccctacaaatacattctgttttt	Protospacer
***********************************************************

2. spacer 2.1|185976|59|NC_015388|CRISPRCasFinder matches to position: 2744959-2745017, mismatch: 0, identity: 1.0

ggcgtaaaggcgtagtggcgtagtgggcattgcccaccctacaaatacattctgttttt	CRISPR spacer
ggcgtaaaggcgtagtggcgtagtgggcattgcccaccctacaaatacattctgttttt	Protospacer
***********************************************************

3. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 209949-210007, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

4. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 782527-782585, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

5. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 917817-917875, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

6. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 941246-941304, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

7. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1136030-1136088, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

8. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1341673-1341731, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

9. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1587906-1587964, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

10. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1783113-1783171, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

11. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 2386778-2386836, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

12. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 2745065-2745123, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

13. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 3008016-3008074, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

14. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 3282361-3282419, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

15. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 189349-189407, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

16. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1260589-1260647, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

17. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1509657-1509715, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

18. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1509771-1509829, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

19. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1577228-1577286, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

20. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1626585-1626643, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

21. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1886555-1886613, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

22. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1990798-1990856, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

23. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 3226326-3226384, mismatch: 0, identity: 1.0

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	Protospacer
***********************************************************

24. spacer 7.3|1341567|51|NC_015388|CRISPRCasFinder matches to position: 209843-209893, mismatch: 0, identity: 1.0

ggcgtaaaggcgtagtggcgtagtgggcattgcccaccctacaaatacatt	CRISPR spacer
ggcgtaaaggcgtagtggcgtagtgggcattgcccaccctacaaatacatt	Protospacer
***************************************************

25. spacer 7.3|1341567|51|NC_015388|CRISPRCasFinder matches to position: 2744959-2745009, mismatch: 0, identity: 1.0

ggcgtaaaggcgtagtggcgtagtgggcattgcccaccctacaaatacatt	CRISPR spacer
ggcgtaaaggcgtagtggcgtagtgggcattgcccaccctacaaatacatt	Protospacer
***************************************************

26. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 189402-189461, mismatch: 0, identity: 1.0

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	Protospacer
************************************************************

27. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 790904-790963, mismatch: 0, identity: 1.0

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	Protospacer
************************************************************

28. spacer 2.1|185976|59|NC_015388|CRISPRCasFinder matches to position: 1886441-1886499, mismatch: 1, identity: 0.983

ggcgtaaaggcgtagtggcgtagtgggcattgcccaccctacaaatacattctgttttt	CRISPR spacer
ggcgtagaggcgtagtggcgtagtgggcattgcccaccctacaaatacattctgttttt	Protospacer
******.****************************************************

29. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 25404-25462, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcactgctca	Protospacer
***************************************************** *****

30. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 941125-941183, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgcggctcacggctcacggctcacggctca	Protospacer
******************************** **************************

31. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1214543-1214601, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgcggctcacggctcacggctcacggctca	Protospacer
******************************** **************************

32. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1214657-1214715, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgcggctcacggctcacggctcacggctca	Protospacer
******************************** **************************

33. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1492539-1492597, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggccca	Protospacer
********************************************************.**

34. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1587792-1587850, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcatggctcacggctcacggctca	Protospacer
**************************************.********************

35. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1783234-1783292, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggcttacggctcacggctca	Protospacer
*******************************************.***************

36. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 2501510-2501568, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcactgctca	Protospacer
***************************************************** *****

37. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 189235-189293, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggcttacggctcacggctca	Protospacer
*******************************************.***************

38. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 833701-833759, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgttttcgctgctcacggctcacggctcacggctca	Protospacer
*****************************.*****************************

39. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1260361-1260419, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcactgctca	Protospacer
***************************************************** *****

40. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1260475-1260533, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggcttacggctca	Protospacer
**************************************************.********

41. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1260703-1260761, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcactgctca	Protospacer
***************************************************** *****

42. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1317452-1317510, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgcggctcacggctcacggctcacggctca	Protospacer
******************************** **************************

43. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1377387-1377445, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcactgctca	Protospacer
***************************************************** *****

44. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1377501-1377559, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgtttttgctgctcacggctcacagctcacggctca	Protospacer
**********************************************.************

45. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 1990684-1990742, mismatch: 1, identity: 0.983

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggcggctgctcacaataatgttattgctgctcacggctcacggctcacggctca	Protospacer
*************************** *******************************

46. spacer 7.3|1341567|51|NC_015388|CRISPRCasFinder matches to position: 1886449-1886499, mismatch: 1, identity: 0.98

ggcgtaaaggcgtagtggcgtagtgggcattgcccaccctacaaatacatt	CRISPR spacer
ggcgtagaggcgtagtggcgtagtgggcattgcccaccctacaaatacatt	Protospacer
******.********************************************

47. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 189288-189347, mismatch: 1, identity: 0.983

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgttttcatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	Protospacer
**************.*********************************************

48. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 782366-782425, mismatch: 1, identity: 0.983

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgcacttatataaaaaca	Protospacer
******************************************** ***************

49. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 791011-791070, mismatch: 1, identity: 0.983

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatgcttcgttgtgttcggcagaacatgtggacttatataaaaaca	Protospacer
********************************************.***************

50. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 1075266-1075325, mismatch: 1, identity: 0.983

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttgtataaaaaca	Protospacer
*************************************************.**********

51. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 1075480-1075539, mismatch: 1, identity: 0.983

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgcacttatataaaaaca	Protospacer
******************************************** ***************

52. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 1260414-1260473, mismatch: 1, identity: 0.983

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatgcttcgttgtgttcggcagaacatgtggacttatataaaaaca	Protospacer
********************************************.***************

53. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 1260528-1260587, mismatch: 1, identity: 0.983

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatgcttcgttgtgttcggcagaacatgtggacttatataaaaaca	Protospacer
********************************************.***************

54. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 1317505-1317564, mismatch: 1, identity: 0.983

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgcacttatataaaaaca	Protospacer
******************************************** ***************

55. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 1587738-1587797, mismatch: 1, identity: 0.983

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatgcttcgttgtgttcggcagaacatgtggacttatataaaaaca	Protospacer
********************************************.***************

56. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 1587852-1587911, mismatch: 1, identity: 0.983

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgcacttatataaaaaca	Protospacer
******************************************** ***************

57. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 1783180-1783239, mismatch: 1, identity: 0.983

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgttttcatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	Protospacer
**************.*********************************************

58. spacer 7.2|1341453|59|NC_015388|CRISPRCasFinder matches to position: 2818664-2818722, mismatch: 2, identity: 0.966

atcgtggcggctgctcacaataatgtttttgctgctcacggctcacggctcacggctca	CRISPR spacer
atcgtggtggctgctcacaataatgtttttgctgctcacggctcacggctcactgctca	Protospacer
*******.********************************************* *****

59. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 287194-287253, mismatch: 2, identity: 0.967

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatgcttcgttgtgttcggcagaacatgagcacttatataaaaaca	Protospacer
****************************************** * ***************

60. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 782473-782532, mismatch: 2, identity: 0.967

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatacttcgttgtgttcggcagaacatgtgcacttatataaaaaca	Protospacer
*****************.************************** ***************

61. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 941192-941251, mismatch: 2, identity: 0.967

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatgcttcgttgggttcggcagaacatgtgcacttatataaaaaca	Protospacer
************************** ***************** ***************

62. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 1075373-1075432, mismatch: 2, identity: 0.967

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatacttcgttgtgttcggcagaacatgtgcacttatataaaaaca	Protospacer
*****************.************************** ***************

63. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 1214603-1214662, mismatch: 2, identity: 0.967

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatgcttcgttgtgttcgggagaacatgtgcacttatataaaaaca	Protospacer
********************************* ********** ***************

64. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 1377440-1377499, mismatch: 2, identity: 0.967

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatgcttcgttgtgttcggcagaacatgtggacttgtataaaaaca	Protospacer
********************************************.****.**********

65. spacer 10.1|1577281|60|NC_015388|CRISPRCasFinder matches to position: 3282307-3282366, mismatch: 2, identity: 0.967

cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgaacttatataaaaaca	CRISPR spacer
cacgattctgtttttatgcttcgttgtgttcggcagaacatgtgcacttgtataaaaaca	Protospacer
******************************************** ****.**********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 LR134132 Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12 110948-110984 2 0.946
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 MN996301 Ralstonia phage RpY1, complete genome 337-373 2 0.946
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 MN996301 Ralstonia phage RpY1, complete genome 42128-42164 2 0.946
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 MN175386 Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence 146157-146193 3 0.919
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP034201 Klebsiella pneumoniae subsp. pneumoniae strain KpvST383_NDM_OXA-48 plasmid pKpvST383L, complete sequence 118912-118948 3 0.919
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP009824 Xylella fastidiosa strain J1a12 plasmid pXF27-J1, complete sequence 19785-19821 3 0.919
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP048109 Klebsiella michiganensis strain BD177 plasmid unnamed1 109917-109953 3 0.919
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP019840 Enterobacter roggenkampii strain R11 plasmid pASM1, complete sequence 56750-56786 3 0.919
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP022149 Enterobacter roggenkampii strain 704SK10 plasmid p704SK10_1, complete sequence 3689-3725 3 0.919
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP040726 Klebsiella pneumoniae strain KpvST147B_SE1_1_NDM plasmid pKpvST147B_virulence, complete sequence 267227-267263 3 0.919
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP050380 Klebsiella pneumoniae strain 51015 plasmid p51015_NDM_1, complete sequence 12146-12182 3 0.919
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP032836 Klebsiella pneumoniae strain INF237 plasmid pINF237_03, complete sequence 75926-75962 3 0.919
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP034699 Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence 185617-185653 3 0.919
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP034710 Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence 59469-59505 3 0.919
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP033798 Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed2, complete sequence 39992-40028 3 0.919
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP031372 Klebsiella pneumoniae strain KpvST101_OXA-48 plasmid pKpvST101_5, complete sequence 178172-178208 3 0.919
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP044353 Xylella fastidiosa strain ATCC 35879 plasmid pXF879-41, complete sequence 41501-41537 3 0.919
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_LR594660 Variovorax sp. PBL-H6 plasmid 2 251235-251271 4 0.892
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_LR594660 Variovorax sp. PBL-H6 plasmid 2 401625-401661 4 0.892
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_LR594667 Variovorax sp. SRS16 plasmid 2 398741-398777 4 0.892
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_LR594667 Variovorax sp. SRS16 plasmid 2 549132-549168 4 0.892
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_LR594690 Variovorax sp. WDL1 plasmid 2 382665-382701 4 0.892
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP045303 Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence 302429-302465 4 0.892
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_LR594672 Variovorax sp. PBL-E5 plasmid 2 398875-398911 4 0.892
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_LR594672 Variovorax sp. PBL-E5 plasmid 2 549265-549301 4 0.892
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP044084 Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence 229437-229473 4 0.892
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NC_011282 Klebsiella variicola strain 342 plasmid pKP187, complete sequence 58903-58939 4 0.892
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NC_013930 Thioalkalivibrio sp. K90mix plasmid pTK9001, complete sequence 54524-54560 4 0.892
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP044084 Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence 565618-565654 5 0.865
NC_015388_1 1.91|94142|30|NC_015388|PILER-CR 94142-94171 30 NC_011879 Pseudarthrobacter chlorophenolicus A6 plasmid pACHL01, complete sequence 354233-354262 7 0.767
NC_015388_1 1.91|94142|30|NC_015388|PILER-CR 94142-94171 30 NC_016623 Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence 203404-203433 7 0.767
NC_015388_1 1.91|94142|30|NC_015388|PILER-CR 94142-94171 30 NZ_CP040452 Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence 810671-810700 7 0.767
NC_015388_1 1.21|89170|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT 89170-89204 35 NZ_CP034156 Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence 545776-545810 8 0.771
NC_015388_1 1.44|90850|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT 90850-90884 35 NZ_CP034156 Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence 545776-545810 8 0.771
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP045303 Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence 79190-79226 8 0.784
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP014676 Kozakia baliensis strain DSM 14400 plasmid pKB14400_2, complete sequence 33997-34033 8 0.784
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP022118 Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence 64270-64306 8 0.784
NC_015388_1 1.91|94142|30|NC_015388|PILER-CR 94142-94171 30 NZ_CP046573 Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence 383137-383166 8 0.733
NC_015388_1 1.91|94142|30|NC_015388|PILER-CR 94142-94171 30 CP003950 Rhodococcus opacus PD630 plasmid 1, complete sequence 20031-20060 8 0.733
NC_015388_1 1.91|94142|30|NC_015388|PILER-CR 94142-94171 30 NC_004173 Pseudomonas phage phi12 segment L, complete sequence 5406-5435 8 0.733
NC_015388_1 1.91|94142|30|NC_015388|PILER-CR 94142-94171 30 AF408636 Bacteriophage phi-12 P14 (14), P15 (15), core protein P7 (7), RNA-dependent RNA polymerase P2 (2), NTPase P4 (4), and major core structural protein P1 (1) genes, complete cds 5406-5435 8 0.733
NC_015388_1 1.91|94142|30|NC_015388|PILER-CR 94142-94171 30 NZ_CP030772 Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence 290715-290744 8 0.733
NC_015388_12 12.1|2013874|29|NC_015388|CRISPRCasFinder 2013874-2013902 29 MN693811 Marine virus AFVG_250M463, complete genome 50637-50665 8 0.724
NC_015388_1 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT 90487-90522 36 NZ_CP016317 Bacillus cereus strain M3 plasmid pBCM301, complete sequence 107814-107849 9 0.75
NC_015388_1 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT 90487-90522 36 NC_011655 Bacillus cereus AH187 plasmid pAH187_270, complete sequence 12637-12672 9 0.75
NC_015388_1 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT 90487-90522 36 NZ_CP045534 Bacillaceae bacterium C02 plasmid unnamed1, complete sequence 6943-6978 9 0.75
NC_015388_1 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT 90487-90522 36 NC_010924 Bacillus cereus strain AH187 plasmid pCER270, complete sequence 69046-69081 9 0.75
NC_015388_1 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT 90487-90522 36 CP045776 Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence 58361-58396 9 0.75
NC_015388_1 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT 90487-90522 36 NC_016792 Bacillus cereus NC7401 plasmid pNCcld, complete sequence 67915-67950 9 0.75
NC_015388_1 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT 90487-90522 36 NZ_CP009299 Bacillus cereus D17 plasmid unnamed, complete sequence 126007-126042 9 0.75
NC_015388_1 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT 90487-90522 36 NZ_CP047086 Bacillus paranthracis strain BC307 plasmid pCE1, complete sequence 144355-144390 9 0.75
NC_015388_1 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT 90487-90522 36 NC_005707 Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequence 95396-95431 9 0.75
NC_015388_1 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT 90487-90522 36 NZ_CP053930 Bacillus cereus strain FDAARGOS_797 plasmid unnamed1, complete sequence 51384-51419 9 0.75
NC_015388_1 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT 90487-90522 36 NZ_CP033789 Bacillus sp. FDAARGOS_527 plasmid unnamed2, complete sequence 168513-168548 9 0.75
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 CP054337 Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence 92477-92513 9 0.757
NC_015388_1 1.78|93329|34|NC_015388|PILER-CR,CRISPRCasFinder,CRT 93329-93362 34 NZ_CP029831 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence 185580-185613 9 0.735
NC_015388_1 1.91|94142|30|NC_015388|PILER-CR 94142-94171 30 AP017627 Pleomorphomonas sp. SM30 plasmid pSM30-1 DNA, complete genome 59042-59071 9 0.7
NC_015388_9 9.17|1490077|33|NC_015388|CRISPRCasFinder,CRT 1490077-1490109 33 KX853513 Uncultured virus isolate Rctr41k, partial genome 12110-12142 9 0.727
NC_015388_1 1.14|88661|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT 88661-88695 35 MN692999 Marine virus AFVG_117M75, complete genome 52930-52964 10 0.714
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_CP035180 Klebsiella pneumoniae strain BA33875 plasmid pBA33875_IncFIB, complete sequence 244327-244363 10 0.73
NC_015388_1 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 91579-91615 37 NZ_KM406416 Bifidobacterium breve strain JCM 7017 plasmid megaplasmid pMP7017, complete sequence 151219-151255 10 0.73
NC_015388_1 1.60|92018|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 92018-92054 37 NZ_CP011154 Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence 999-1035 10 0.73
NC_015388_1 1.60|92018|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT 92018-92054 37 NZ_CP011152 Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence 545880-545916 10 0.73
NC_015388_1 1.70|92747|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT 92747-92781 35 NZ_LR134466 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 24, complete sequence 24764-24798 10 0.714
NC_015388_1 1.70|92747|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT 92747-92781 35 NC_013857 Azospirillum sp. B510 plasmid pAB510c, complete sequence 347040-347074 10 0.714
NC_015388_11 11.4|1935014|32|NC_015388|PILER-CR,CRISPRCasFinder,CRT 1935014-1935045 32 KP836355 Marinitoga camini virus 1, complete genome 14704-14735 10 0.688
NC_015388_11 11.8|1935304|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT 1935304-1935338 35 NZ_CP033508 Mesorhizobium jarvisii strain ATCC 700743 plasmid pMJ700743a, complete sequence 223681-223715 10 0.714
NC_015388_11 11.8|1935304|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT 1935304-1935338 35 NZ_CP033369 Mesorhizobium loti strain SU343 plasmid pMLSU343a, complete sequence 223681-223715 10 0.714
NC_015388_11 11.8|1935304|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT 1935304-1935338 35 NZ_CP016080 Mesorhizobium loti NZP2037 plasmid pML2037, complete sequence 455463-455497 10 0.714
NC_015388_1 1.42|90705|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT 90705-90739 35 NZ_CP032695 Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence 2113889-2113923 11 0.686
NC_015388_1 1.78|93329|34|NC_015388|PILER-CR,CRISPRCasFinder,CRT 93329-93362 34 NC_017311 Desulfovibrio vulgaris RCH1 plasmid pDEVAL01, complete sequence 110362-110395 11 0.676
NC_015388_1 1.78|93329|34|NC_015388|PILER-CR,CRISPRCasFinder,CRT 93329-93362 34 NC_005863 Desulfovibrio vulgaris str. Hildenborough plasmid pDV, complete sequence 115805-115838 11 0.676
NC_015388_1 1.78|93329|34|NC_015388|PILER-CR,CRISPRCasFinder,CRT 93329-93362 34 NC_008741 Desulfovibrio vulgaris DP4 plasmid pDVUL01, complete sequence 88027-88060 11 0.676
NC_015388_1 1.78|93329|34|NC_015388|PILER-CR,CRISPRCasFinder,CRT 93329-93362 34 NC_011962 Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence 51279-51312 11 0.676
NC_015388_1 1.78|93329|34|NC_015388|PILER-CR,CRISPRCasFinder,CRT 93329-93362 34 MH588544 Caulobacter phage CcrBL10, complete genome 116771-116804 11 0.676
NC_015388_9 9.17|1490077|33|NC_015388|CRISPRCasFinder,CRT 1490077-1490109 33 KX853513 Uncultured virus isolate Rctr41k, partial genome 12108-12140 11 0.667

1. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to LR134132 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12) position: , mismatch: 2, identity: 0.946

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatccccgtcctttagggcggagaggatgtcaat	Protospacer
*******.**************************** 

2. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to MN996301 (Ralstonia phage RpY1, complete genome) position: , mismatch: 2, identity: 0.946

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatccccgtcctttagggcggggaggatgtcaag	Protospacer
*******.****************.************

3. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to MN996301 (Ralstonia phage RpY1, complete genome) position: , mismatch: 2, identity: 0.946

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatccccgtcctttagggcggggaggatgtcaag	Protospacer
*******.****************.************

4. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to MN175386 (Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence) position: , mismatch: 3, identity: 0.919

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatccccgtcctttagggcggggaggatgtcaat	Protospacer
*******.****************.*********** 

5. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034201 (Klebsiella pneumoniae subsp. pneumoniae strain KpvST383_NDM_OXA-48 plasmid pKpvST383L, complete sequence) position: , mismatch: 3, identity: 0.919

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatccccgtcctttagggcggggaggatgtcaac	Protospacer
*******.****************.*********** 

6. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009824 (Xylella fastidiosa strain J1a12 plasmid pXF27-J1, complete sequence) position: , mismatch: 3, identity: 0.919

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatccccgtcctttagggcggggaggatgtcaaa	Protospacer
*******.****************.***********.

7. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048109 (Klebsiella michiganensis strain BD177 plasmid unnamed1) position: , mismatch: 3, identity: 0.919

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatccccgtcctttagggcggggaggatgtcaac	Protospacer
*******.****************.*********** 

8. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019840 (Enterobacter roggenkampii strain R11 plasmid pASM1, complete sequence) position: , mismatch: 3, identity: 0.919

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatctccgcactttagggcggagaggatgtcaaa	Protospacer
***********. ***********************.

9. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022149 (Enterobacter roggenkampii strain 704SK10 plasmid p704SK10_1, complete sequence) position: , mismatch: 3, identity: 0.919

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatctccgcactttagggcggagaggatgtcaaa	Protospacer
***********. ***********************.

10. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040726 (Klebsiella pneumoniae strain KpvST147B_SE1_1_NDM plasmid pKpvST147B_virulence, complete sequence) position: , mismatch: 3, identity: 0.919

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatccccgtcctttagggcggggaggatgtcaac	Protospacer
*******.****************.*********** 

11. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050380 (Klebsiella pneumoniae strain 51015 plasmid p51015_NDM_1, complete sequence) position: , mismatch: 3, identity: 0.919

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatccccgtcctttagggcggggaggatgtcaac	Protospacer
*******.****************.*********** 

12. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032836 (Klebsiella pneumoniae strain INF237 plasmid pINF237_03, complete sequence) position: , mismatch: 3, identity: 0.919

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatccccgtcctttagggcggggaggatgtcaaa	Protospacer
*******.****************.***********.

13. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 3, identity: 0.919

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatccccgtcctttagggcggggaggatgtcaac	Protospacer
*******.****************.*********** 

14. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 3, identity: 0.919

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatccccgtcctttagggcggggaggatgtcaac	Protospacer
*******.****************.*********** 

15. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033798 (Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.919

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatctccgcactttagggcggagaggatgtcaaa	Protospacer
***********. ***********************.

16. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031372 (Klebsiella pneumoniae strain KpvST101_OXA-48 plasmid pKpvST101_5, complete sequence) position: , mismatch: 3, identity: 0.919

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatccccgtcctttagggcggggaggatgtcaac	Protospacer
*******.****************.*********** 

17. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044353 (Xylella fastidiosa strain ATCC 35879 plasmid pXF879-41, complete sequence) position: , mismatch: 3, identity: 0.919

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
aggaatccccgtcctttagggcggggaggatgtcaat	Protospacer
*******.****************.*********** 

18. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 4, identity: 0.892

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
gggaatccccgtcctttagggcggggaggatgtcaat	Protospacer
.******.****************.*********** 

19. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 4, identity: 0.892

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
gggaatccccgtcctttagggcggggaggatgtcaat	Protospacer
.******.****************.*********** 

20. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 4, identity: 0.892

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
gggaatccccgtcctttagggcggggaggatgtcaat	Protospacer
.******.****************.*********** 

21. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 4, identity: 0.892

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
gggaatccccgtcctttagggcggggaggatgtcaat	Protospacer
.******.****************.*********** 

22. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 4, identity: 0.892

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
gggaatccccgtcctttagggcggggaggatgtcaat	Protospacer
.******.****************.*********** 

23. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045303 (Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.892

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
gggaatccccgtcctttagggcggggaggatgtcaac	Protospacer
.******.****************.*********** 

24. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 4, identity: 0.892

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
gggaatccccgtcctttagggcggggaggatgtcaat	Protospacer
.******.****************.*********** 

25. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 4, identity: 0.892

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
gggaatccccgtcctttagggcggggaggatgtcaat	Protospacer
.******.****************.*********** 

26. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044084 (Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.892

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
gggaatccccgtcctttagggcggggaggatgtcaac	Protospacer
.******.****************.*********** 

27. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NC_011282 (Klebsiella variicola strain 342 plasmid pKP187, complete sequence) position: , mismatch: 4, identity: 0.892

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
atgaatccccgtcctttagggcggggaggatgtcaac	Protospacer
* *****.****************.*********** 

28. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NC_013930 (Thioalkalivibrio sp. K90mix plasmid pTK9001, complete sequence) position: , mismatch: 4, identity: 0.892

aggaatctccgtcctttagggcggagaggatgtcaag-	CRISPR spacer
gggaatctccgtcctttagggcggagagca-gtcaacg	Protospacer
.*************************** * *****  

29. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044084 (Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.865

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
gagaatcaccgtcctttagggcggggaggatgtcagg	Protospacer
..***** ****************.**********.*

30. spacer 1.91|94142|30|NC_015388|PILER-CR matches to NC_011879 (Pseudarthrobacter chlorophenolicus A6 plasmid pACHL01, complete sequence) position: , mismatch: 7, identity: 0.767

ggggtattcaacgccgccgacgacaccttg	CRISPR spacer
aaaggcttcaaggccgcccacgacaccttg	Protospacer
...*  ***** ****** ***********

31. spacer 1.91|94142|30|NC_015388|PILER-CR matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 7, identity: 0.767

-ggggtattcaacgccgccgacgacaccttg	CRISPR spacer
ttgcgcgtcc-atgccgccgacgacaccttg	Protospacer
  * *..*.* *.******************

32. spacer 1.91|94142|30|NC_015388|PILER-CR matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ggggtattcaacgccgccgacgacaccttg	CRISPR spacer
tcgggtttcaccgccgcccacgacaccttc	Protospacer
  **  **** ******* ********** 

33. spacer 1.21|89170|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.771

ccagaagcgtcatggcatgggtaatggc-ttgcttg	CRISPR spacer
ccagaagcgtcatggcacgggcaatgtcggcgccc-	Protospacer
*****************.***.**** *  .**.. 

34. spacer 1.44|90850|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.771

ccagaagcgtcatggcatgggtaatggc-ttgcttg	CRISPR spacer
ccagaagcgtcatggcacgggcaatgtcggcgccc-	Protospacer
*****************.***.**** *  .**.. 

35. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045303 (Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.784

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
catcctctccgtcctttagggcgggaaggatgtcaat	Protospacer
 .   *******************..********** 

36. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014676 (Kozakia baliensis strain DSM 14400 plasmid pKB14400_2, complete sequence) position: , mismatch: 8, identity: 0.784

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
catcttctccgtcctttagggcggagaagatgttaat	Protospacer
 .   **********************.*****.** 

37. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022118 (Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.784

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
caggaaccccatccttcagggcggagaggatgtcaaa	Protospacer
 .*.* *.**.*****.*******************.

38. spacer 1.91|94142|30|NC_015388|PILER-CR matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 8, identity: 0.733

ggggtattcaacgccgccgacgacaccttg	CRISPR spacer
atcgacctcaacgccgccgacgacacctcc	Protospacer
.  *  .*********************. 

39. spacer 1.91|94142|30|NC_015388|PILER-CR matches to CP003950 (Rhodococcus opacus PD630 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.733

ggggtattcaacgccgccgacgacaccttg	CRISPR spacer
atcgacctcaacgccgccgacgacacctcc	Protospacer
.  *  .*********************. 

40. spacer 1.91|94142|30|NC_015388|PILER-CR matches to NC_004173 (Pseudomonas phage phi12 segment L, complete sequence) position: , mismatch: 8, identity: 0.733

ggggtattcaacgccgccgacgacaccttg	CRISPR spacer
aaggtattcatcgcggccgacgacattata	Protospacer
..******** *** **********.. *.

41. spacer 1.91|94142|30|NC_015388|PILER-CR matches to AF408636 (Bacteriophage phi-12 P14 (14), P15 (15), core protein P7 (7), RNA-dependent RNA polymerase P2 (2), NTPase P4 (4), and major core structural protein P1 (1) genes, complete cds) position: , mismatch: 8, identity: 0.733

ggggtattcaacgccgccgacgacaccttg	CRISPR spacer
aaggtattcatcgcggccgacgacattata	Protospacer
..******** *** **********.. *.

42. spacer 1.91|94142|30|NC_015388|PILER-CR matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 8, identity: 0.733

ggggtattcaacgccgccgacgacaccttg	CRISPR spacer
cgggtactcaacgccgccgacgcccgcgac	Protospacer
 *****.*************** *  *   

43. spacer 12.1|2013874|29|NC_015388|CRISPRCasFinder matches to MN693811 (Marine virus AFVG_250M463, complete genome) position: , mismatch: 8, identity: 0.724

gagatatgctttccctgaaaatggtttat	CRISPR spacer
acgatatgctttccttgaaaatggagatg	Protospacer
. ************.*********     

44. spacer 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016317 (Bacillus cereus strain M3 plasmid pBCM301, complete sequence) position: , mismatch: 9, identity: 0.75

attgctattcatgtcagaaatttgatgaggaattca	CRISPR spacer
tgcacaaatcatgtcggaaattagatgaggaattct	Protospacer
  ..* * *******.****** ************ 

45. spacer 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NC_011655 (Bacillus cereus AH187 plasmid pAH187_270, complete sequence) position: , mismatch: 9, identity: 0.75

attgctattcatgtcagaaatttgatgaggaattca	CRISPR spacer
tgcacaaatcatgtcggaaattagatgaggaattct	Protospacer
  ..* * *******.****** ************ 

46. spacer 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045534 (Bacillaceae bacterium C02 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

attgctattcatgtcagaaatttgatgaggaattca	CRISPR spacer
tgcacaaatcatgtcggaaattagatgaggaattct	Protospacer
  ..* * *******.****** ************ 

47. spacer 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NC_010924 (Bacillus cereus strain AH187 plasmid pCER270, complete sequence) position: , mismatch: 9, identity: 0.75

attgctattcatgtcagaaatttgatgaggaattca	CRISPR spacer
tgcacaaatcatgtcggaaattagatgaggaattct	Protospacer
  ..* * *******.****** ************ 

48. spacer 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to CP045776 (Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence) position: , mismatch: 9, identity: 0.75

attgctattcatgtcagaaatttgatgaggaattca	CRISPR spacer
tgcacaaatcatgtcggaaattagatgaggaattct	Protospacer
  ..* * *******.****** ************ 

49. spacer 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NC_016792 (Bacillus cereus NC7401 plasmid pNCcld, complete sequence) position: , mismatch: 9, identity: 0.75

attgctattcatgtcagaaatttgatgaggaattca	CRISPR spacer
tgcacaaatcatgtcggaaattagatgaggaattct	Protospacer
  ..* * *******.****** ************ 

50. spacer 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009299 (Bacillus cereus D17 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.75

attgctattcatgtcagaaatttgatgaggaattca	CRISPR spacer
tgcacaaatcatgtcggaaattagatgaggaattct	Protospacer
  ..* * *******.****** ************ 

51. spacer 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047086 (Bacillus paranthracis strain BC307 plasmid pCE1, complete sequence) position: , mismatch: 9, identity: 0.75

attgctattcatgtcagaaatttgatgaggaattca	CRISPR spacer
tgcacaaatcatgtcggaaattagatgaggaattct	Protospacer
  ..* * *******.****** ************ 

52. spacer 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NC_005707 (Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequence) position: , mismatch: 9, identity: 0.75

attgctattcatgtcagaaatttgatgaggaattca	CRISPR spacer
tgcacaaatcatgtcggaaattagatgaggaattct	Protospacer
  ..* * *******.****** ************ 

53. spacer 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053930 (Bacillus cereus strain FDAARGOS_797 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

attgctattcatgtcagaaatttgatgaggaattca	CRISPR spacer
tgcacaaatcatgtcggaaattagatgaggaattct	Protospacer
  ..* * *******.****** ************ 

54. spacer 1.39|90487|36|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033789 (Bacillus sp. FDAARGOS_527 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.75

attgctattcatgtcagaaatttgatgaggaattca	CRISPR spacer
tgcacaaatcatgtcggaaattagatgaggaattct	Protospacer
  ..* * *******.****** ************ 

55. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to CP054337 (Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence) position: , mismatch: 9, identity: 0.757

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
catcctccacgtcctttagggcgtggaggatgtcaag	Protospacer
 .   **. ************** .************

56. spacer 1.78|93329|34|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 9, identity: 0.735

tttacgct----tggcggagatggcgtcctcgaccgaa	CRISPR spacer
----cgccttgatgtcggcgatggcgtcctcgaccggc	Protospacer
    ***.    ** *** *****************. 

57. spacer 1.91|94142|30|NC_015388|PILER-CR matches to AP017627 (Pleomorphomonas sp. SM30 plasmid pSM30-1 DNA, complete genome) position: , mismatch: 9, identity: 0.7

ggggtattcaacgccgccgacgacaccttg	CRISPR spacer
gacccggccaacgccgccgacgccaccttc	Protospacer
*.  .. .************** ****** 

58. spacer 9.17|1490077|33|NC_015388|CRISPRCasFinder,CRT matches to KX853513 (Uncultured virus isolate Rctr41k, partial genome) position: , mismatch: 9, identity: 0.727

--ccgtaggggcggggttaccccgcccctacgccg	CRISPR spacer
caacgtaggggcggggttcccccgccctgtaac--	Protospacer
   *************** ********.   .*  

59. spacer 1.14|88661|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to MN692999 (Marine virus AFVG_117M75, complete genome) position: , mismatch: 10, identity: 0.714

tcgtgagagttatcaatacctaactttatagtaat	CRISPR spacer
cacatagagttatcaataccaaactttttaacact	Protospacer
.    *************** ****** **..* *

60. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035180 (Klebsiella pneumoniae strain BA33875 plasmid pBA33875_IncFIB, complete sequence) position: , mismatch: 10, identity: 0.73

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
acatcctcccgccctttagggcggggaggatgtcaac	Protospacer
* .  ...***.************.*********** 

61. spacer 1.54|91579|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KM406416 (Bifidobacterium breve strain JCM 7017 plasmid megaplasmid pMP7017, complete sequence) position: , mismatch: 10, identity: 0.73

aggaatctccgtcctttagggcggagaggatgtcaag	CRISPR spacer
tggagactccgtcctttagggcggagaggaaacgccc	Protospacer
 ***. ************************ ..    

62. spacer 1.60|92018|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011154 (Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence) position: , mismatch: 10, identity: 0.73

ttcataatttttctcctgttgatttttagctcggggc	CRISPR spacer
ataataattttgatcctgttgatttttagattgaaaa	Protospacer
 * ********  **************** *.*... 

63. spacer 1.60|92018|37|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011152 (Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence) position: , mismatch: 10, identity: 0.73

ttcataatttttctcctgttgatttttagctcggggc	CRISPR spacer
ataataattttgatcctgttgatttttagattgaaaa	Protospacer
 * ********  **************** *.*... 

64. spacer 1.70|92747|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134466 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 24, complete sequence) position: , mismatch: 10, identity: 0.714

ctgggcggccctggcggtctccgggcccgccttca	CRISPR spacer
gctcaccgccctgtcgggctccgggcccgcctacg	Protospacer
 .  .* ****** *** ************** *.

65. spacer 1.70|92747|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 10, identity: 0.714

ctgggcggccctggcggtctccgggcccgccttca	CRISPR spacer
cggggcggccccggccgtctccgggcctggaccgg	Protospacer
* *********.*** ***********.*  .. .

66. spacer 11.4|1935014|32|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to KP836355 (Marinitoga camini virus 1, complete genome) position: , mismatch: 10, identity: 0.688

ttaggcaggatagtaaactctggagcattgtt	CRISPR spacer
aaaaaagaaatagtaaattctgaagcattgtt	Protospacer
  *.. ...********.****.*********

67. spacer 11.8|1935304|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033508 (Mesorhizobium jarvisii strain ATCC 700743 plasmid pMJ700743a, complete sequence) position: , mismatch: 10, identity: 0.714

gctaaagcggtcgccggagacgtggtagagctaca	CRISPR spacer
ccggaagcggtcgccggtgacgtggtcgaagcgaa	Protospacer
 * .************* ******** **. .. *

68. spacer 11.8|1935304|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033369 (Mesorhizobium loti strain SU343 plasmid pMLSU343a, complete sequence) position: , mismatch: 10, identity: 0.714

gctaaagcggtcgccggagacgtggtagagctaca	CRISPR spacer
ccggaagcggtcgccggtgacgtggtcgaagcgaa	Protospacer
 * .************* ******** **. .. *

69. spacer 11.8|1935304|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016080 (Mesorhizobium loti NZP2037 plasmid pML2037, complete sequence) position: , mismatch: 10, identity: 0.714

gctaaagcggtcgccggagacgtggtagagctaca	CRISPR spacer
ccggaagcggtcgccggtgacgtggtcgaagcgaa	Protospacer
 * .************* ******** **. .. *

70. spacer 1.42|90705|35|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 11, identity: 0.686

cttggatacagtttttccggagacagggacatcta	CRISPR spacer
acggcgcccagtttttccggagacaaggtcatcgg	Protospacer
 . * .. *****************.** **** .

71. spacer 1.78|93329|34|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NC_017311 (Desulfovibrio vulgaris RCH1 plasmid pDEVAL01, complete sequence) position: , mismatch: 11, identity: 0.676

tttacgcttggcggagatggcgtcctcgaccgaa	CRISPR spacer
acggcgcatggcggcgatggcgtcctcgatgacg	Protospacer
 . .*** ****** **************. . .

72. spacer 1.78|93329|34|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NC_005863 (Desulfovibrio vulgaris str. Hildenborough plasmid pDV, complete sequence) position: , mismatch: 11, identity: 0.676

tttacgcttggcggagatggcgtcctcgaccgaa	CRISPR spacer
acggcgcatggcggcgatggcgtcctcgatgacg	Protospacer
 . .*** ****** **************. . .

73. spacer 1.78|93329|34|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NC_008741 (Desulfovibrio vulgaris DP4 plasmid pDVUL01, complete sequence) position: , mismatch: 11, identity: 0.676

tttacgcttggcggagatggcgtcctcgaccgaa	CRISPR spacer
acggcgcatggcggcgatggcgtcctcgatgacg	Protospacer
 . .*** ****** **************. . .

74. spacer 1.78|93329|34|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to NC_011962 (Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence) position: , mismatch: 11, identity: 0.676

tttacgcttggcggagatggcgtcctcgaccgaa	CRISPR spacer
gcggaacttggcggcgatggcgccctcgacggcg	Protospacer
 . . .******** *******.******* * .

75. spacer 1.78|93329|34|NC_015388|PILER-CR,CRISPRCasFinder,CRT matches to MH588544 (Caulobacter phage CcrBL10, complete genome) position: , mismatch: 11, identity: 0.676

tttacgcttggcggagatggcgtcctcgaccgaa	CRISPR spacer
ggcgcgctcggcggcgatggcgtcctcgtcgagg	Protospacer
  ..****.***** ************* * ...

76. spacer 9.17|1490077|33|NC_015388|CRISPRCasFinder,CRT matches to KX853513 (Uncultured virus isolate Rctr41k, partial genome) position: , mismatch: 11, identity: 0.667

--ccgtaggggcggggttaccccgcccctacgccg	CRISPR spacer
gggttacagggcgggggaaccccgcccctacgt--	Protospacer
   .   .********  **************.  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 992118 : 1060677 60 Staphylococcus_phage(33.33%) integrase,transposase,tRNA attL 1005525:1005546|attR 1033835:1033856
DBSCAN-SWA_2 1687226 : 1696226 8 uncultured_Caudovirales_phage(50.0%) head,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage