CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_005363	Bdellovibrio bacteriovorus HD100, complete genome	1 crisprs	DinG,cas3,Cas9_archaeal,DEDDh,RT,csa3	0	0	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_005363_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_005363_1

2972406-2972519

Orphan

Consensus_repeat	Method
TTCGTCGGCCTTGCGTTGTTCTTCCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_005363_1

>merge|NC_005363|1|2972406-2972519|CRISPRCasFinder
TTCGTCGGCCTTGCGTTGTTCTTCCTGCTTGCGAGCTTCTTCCTGTTTACGAGCCTGCTCTTGCTGTTGCTGCTGCTGGCGACGAACTTCGTCGGCCTTGCGCTGTTCTTCCTG

>NC_005363|1|1|2972406-2972519|CRISPRCasFinder
TTCGTCGGCCTTGCGTTGTTCTTCCTG	CTTGCGAGCTTCTTCCTGTTTACGAGCCTGCTCTTGCTGTTGCTGCTGCTGGCGACGAAC
TTCGTCGGCCTTGCGCTGTTCTTCCTG

Protein	Signature genes	Signature genes Name	Protein_function
NC_005363.1\|WP_011165439.1\|2979684_2981214_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368573
NC_005363.1\|WP_011165441.1\|2982873_2984316_+\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NC_005363.1\|WP_011165423.1\|2962575_2963172_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235640
NC_005363.1\|WP_011165425.1\|2964468_2965221_+\|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|365819
NC_005363.1\|WP_011165426.1\|2965279_2965801_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NC_005363.1\|WP_015092087.1\|2975622_2976222_-\|DNA-repair-protein-RecO	unknown	unknown	gnl\|CDD\|273175
NC_005363.1\|WP_011165440.1\|2981389_2982856_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NC_005363.1\|WP_011165437.1\|2978003_2979110_+\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|224316
NC_005363.1\|WP_011165427.1\|2965855_2969068_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NC_005363.1\|WP_011165433.1\|2974734_2975619_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|234698
NC_005363.1\|WP_011165421.1\|2960611_2961445_+\|flagellin	unknown	unknown	gnl\|CDD\|139237
NC_005363.1\|WP_144313929.1\|2977329_2977953_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275061
NC_005363.1\|WP_157865990.1\|2961719_2962466_+\|hypothetical-protein	unknown	unknown	unknown
NC_005363.1\|WP_011165429.1\|2970681_2971332_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NC_005363.1\|WP_011165430.1\|2971328_2971940_-\|hypothetical-protein	unknown	unknown	unknown
NC_005363.1\|WP_011165435.1\|2976218_2977205_-\|hypothetical-protein	unknown	unknown	unknown
NC_005363.1\|WP_050792946.1\|2969070_2970456_-\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NC_005363.1\|WP_144313928.1\|2973489_2974491_-\|sigma-54-interacting-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NC_005363.1\|WP_041583614.1\|2979200_2979671_+\|hypothetical-protein	unknown	unknown	unknown
NC_005363.1\|WP_011165424.1\|2963235_2964384_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|223594

Protein	Function_ID	Function_description	E-value
NC_005363.1\|WP_011165441.1\|2982873_2984316_+\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	2.51692e-35
NC_005363.1\|WP_011165423.1\|2962575_2963172_+\|hypothetical-protein	gnl\|CDD\|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	4.82853e-17
NC_005363.1\|WP_011165425.1\|2964468_2965221_+\|cyclic-nucleotide-binding-domain-containing-protein	gnl\|CDD\|365819	pfam00027, cNMP_binding, Cyclic nucleotide-binding domain.	9.07196e-23
NC_005363.1\|WP_011165426.1\|2965279_2965801_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	6.78934e-18
NC_005363.1\|WP_015092087.1\|2975622_2976222_-\|DNA-repair-protein-RecO	gnl\|CDD\|273175	TIGR00613, DNA_repair_protein_RecO, DNA repair protein RecO. All proteins in this family for which functions are known are DNA binding proteins that are involved in the initiation of recombination or recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	9.19275e-18
NC_005363.1\|WP_011165437.1\|2978003_2979110_+\|fatty-acid-desaturase	gnl\|CDD\|224316	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism].	2.1405e-81
NC_005363.1\|WP_011165427.1\|2965855_2969068_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NC_005363.1\|WP_011165421.1\|2960611_2961445_+\|flagellin	gnl\|CDD\|139237	PRK12802, PRK12802, flagellin; Provisional.	1.12497e-56
NC_005363.1\|WP_144313929.1\|2977329_2977953_+\|hypothetical-protein	gnl\|CDD\|275061	TIGR04219, hypothetical_protein, outer membrane protein. Members of this protein family are outer membrane proteins (OMP), as can be seen by their homology to YfaZ protein (see ) and by the OMP targeting region at the C-terminus, including a C-terminal Phe residue. Members of this protein family are found in the great majority of genomes with the GlyGly-CTERM protein sorting signal and the rhombosortase putative sorting enzyme, although the relationship may be fortuitous.	8.46825e-08
NC_005363.1\|WP_011165433.1\|2974734_2975619_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|234698	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed.	9.20615e-75
NC_005363.1\|WP_011165429.1\|2970681_2971332_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.20167e-13
NC_005363.1\|WP_011165439.1\|2979684_2981214_-\|hypothetical-protein	gnl\|CDD\|368573	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family. Amidase_YiiX is a family of permuted papain-like amidases. It has amidase specificity for the amide bond between a lipid and an amino acid (or peptide). From the structure, a tetramer, each monomer is made up of a layered alpha-beta fold with a central, 6-stranded, antiparallel beta-sheet that is protected by helices on either side. The catalytic Cys154 in UniProtKB:Q74NK7, Structure 3kw0, is located on the N-terminus of helix alphaF. The two additional helices located above Cys154 contribute to the formation of the active site, where the lysine ligand is bound.	1.21339e-09
NC_005363.1\|WP_011165440.1\|2981389_2982856_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.28141e-08
NC_005363.1\|WP_050792946.1\|2969070_2970456_-\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	1.11007e-13
NC_005363.1\|WP_144313928.1\|2973489_2974491_-\|sigma-54-interacting-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	8.85154e-143
NC_005363.1\|WP_011165424.1\|2963235_2964384_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	9.62656e-34

>NC_005363.1|WP_011165430.1|2971328_2971940_-|hypothetical-protein
MRLLAAVMMILGLSTTANAEWRYGVQIGYSPNYLAKLSGDGTVSGTPTDIDYDLEYKGAVEVGFNAWYAPQHSWGFISGISLGGERDLDKMTLNGVTYSATGSTSKFQTHFLYAGTLYRWESFYLPLGLAYGINKFTPAGTGDGEATNGVGVLFGLGWFFADNFVIEYIGRSTTTELKLSSGTDTAKTKGAIGSALLNLKYFF
>NC_005363.1|WP_011165429.1|2970681_2971332_+|TetR/AcrR-family-transcriptional-regulator
MSDTSQLKTVQDESADGQKGKKRDRSASEERLISAGIEIFSKHGYDGSTTKLIAKKADVNESLIGRYFDGKEGLLLTIVERFIEEVRTEELAYPPQDTLAAELSKYVDFKVGKSHDRDCLGKIIICQCLTDNKFRKKALERIPMFADPKLIERLERLQKMGQIKESVTLEEIAEEIETYLHGAFLFDLILSETPQEIVTKNALRFISHYTAGIGKS
>NC_005363.1|WP_050792946.1|2969070_2970456_-|TolC-family-protein
MHGASASALTLNEYLDQVKGDSTAYKGSAEQSEGAQLKSREADLIFTPKLFAEARWGYDGKPGNPKMYDEVKSQYYSLGVSQQFSFGLQTKLSYDMTRTQFEGLAPTSPINPSKYWDATPKLELSMPLWANGFGRTAQANEEALRAQNIAEKFSSQGQSLNILAGAEAAYWKLAAWQDVVTIQEQAKQAAQSILDYVSRKKRMNLGEEADVLQARALVEARTLELQVAQNEYLEAQRMFNKFLNREATAKVETLEKVNYKSLEQLAIPAARPGSRADVEATNAQLAAARANAVITLERNRPSLDIYGNYAMNGRDEEYNEAMKESGKTDQDTAFVGVRFSMPLNIGAASDTKAGARKAERAAELNREYAYYAQEIDWTNLTRNLQDARDNLRLLSRIEDAQKAKLENERVRLRQGRTTTYQVLLFEQDYTTSAISKVKSAANILGLQAQIKLYQASPEGGK
>NC_005363.1|WP_011165427.1|2965855_2969068_-|efflux-RND-transporter-permease-subunit
MSLPKLSISRPIFITCVTIAMVVVGWASFKSMSVDLYPDVSIPVVTVQTVYAGAGPAEIETLVSRPIEEEVSTISGIKRLTSKSLEGVSQVIVEFNSEVDVKHAEQEVRDKVNLAKAKLPDDVEDPLIKRFDPADTPILTVSLTAKDLGDAALFDIADQFVKPRLEQVRNVGAIEIIGGREREIHVLLDRKKLRAREISVSQVAAQVGASGQNIPSGKVNQGEKEMVFRGLGEFSSVPEISDTLVNLYGNEVPTRVADLGKVVDTLADEKSRAYVDGEKSLFLQVYRQSGSNTVKVAQDVIKQMERIKPELEKMEGAPVVAVMTDASVKISDNLYDVYETIIIGILLTVITVFFFLGSPRSTFITALSVPISLIGAFMVMKIAGFSINIVSMLALTLAVGLLIDDAIVVIENIYRRMELGEESLTAAEKGTTEIQMAVMAITLVVIAVFVPVGTMSGTIGQFLKQFGMTVVFSMAISWFVAMTLIPMLTAYFGGSGHGGGHDKHKPAGLYDKTLGRMVKGFDRFQTMLENLYVKLLNVSLDWPKVTIGLTMVVFFLSIYTVTKVPGAFISDDDSGEFSVTLELQPGTSLDGTEEVARQVDKILHDNPEVRFTTMIVGSLYGESNKASFYVRMKDGKERGPLTTEQFRDKIRGQLTHLSSANPVVKKYDATGGMGGQPFILNIISADPVELEKAGTKMYELLKKDPRLKDVDSNYRPGKPEMQVHLKPGAAKVFGINTSTMGGELRAQVEGLTPAKFRERGREYEVRVRLQDDQRDLMKTFNDVYIPNVNRKLVRLSDIAKGEVESGPASIERQDRGRYIQITAGLAPGAGLSDVVNSAVAAMSTGENALPPSVRYGFGGDAENMQELMTSTVMALGFAILFIYLILSSLYESFITPITIMVALPLALCGAFLALFLTGEVLTIFAIFGFFMLIGVAGKNGILLVDFAKQMMEEGKSRREALILAGKTRLRPILMTSFALIAGVVPVVIGMNAASKTRTAMGVAIIGGMISSTILTLIVVPAVFTYVDRFRVWANNFGARFTSQKKMEEKSSDAVIEETENHDDKGMIPAK
>NC_005363.1|WP_011165426.1|2965279_2965801_-|MarR-family-transcriptional-regulator
MAKLFIQDLPSREEVHTSLTTLPVAAEPDSMAVYSNLLFLKVASEIENSLDSLLSKYNLSSGRFMLLFLLRNAPAGLRPSELANQVGVTQATISGLINSLEKAELVVREGHQSDGRSFVIRLAPKGEQAIQDIFPQWYPRIVNFWNVVSNEEKNSLNGLMEKMIQNKSALTPR
>NC_005363.1|WP_011165425.1|2964468_2965221_+|cyclic-nucleotide-binding-domain-containing-protein
MADLESKRIFLIASAKPEEAEKIESTLNRHIQNATVFTATDGSEALFKAENVIPNVVIVDSEISKISALDLTQKLIQKKERIAVIIMSPLPDTDHFVDEVVTGQVHILTRPTDEATFVEHLTRALNWIVNGDNANYRMKFLAAHQILIREGEKAESVYLVKRGQLKAYKTDNGVETLLGHINPGEFVGEMAYINGEPRSANVMSLTNCELIEIPNNCLDVVLFSKPAWSKALVKTLSLRLKNSNEDKVQN
>NC_005363.1|WP_011165424.1|2963235_2964384_+|aminotransferase-class-V-fold-PLP-dependent-enzyme
MYKHLYKRFLDAHPDQIHFACHSHHYWPDATREAHLQYWDDSCKYVDNKWNHIFSTKVPQAQKLIAESLNLSHPEQIVFAPNTHEFVFRLLSSLNWDKKLRILTTDSEFYSFDRQINRLSEMSQFEVVKVPTLPFETFHERFEAAAKSTPWDLVFVSQVFFNSGLACDIHRLVKSAPSDSLFVVDGYHAFMAVPTDLKALESRIFYLAGSYKYAQGGEGACFLYVPPGTRHRPFHTGWFAELSKLSAVGNEVGYPTDALQYAGSTMDFSALYRLIASLETFKKEGLSVTAIHKHIQNNQKVFLQELEQKKHPLLNRSRLMALDLDHHGHFLTFDLPTTEDCQKLVQGLDARGVHVDSRKNRLRFGFGLYHDAEDVRSVIERL
>NC_005363.1|WP_011165423.1|2962575_2963172_+|hypothetical-protein
MAKKKAKPAKKVAKKAAKPAKKAAAKKVTKKAAKPAKKATAKKAAKPAKKAAPKKAAKPAKKAAPKKAAVKKAAKPAKKAAAKKPAAKKPAAKKSAAPKKAAAAAVGGIAAVEVLKPQVEDMTADFDDEAEIDSMIDIEEEAVSEDDEWDDEEESEEGEGSIEEEDEEIEEDITSKNDDDGDDDDEDDEDFGDDEGYF
>NC_005363.1|WP_157865990.1|2961719_2962466_+|hypothetical-protein
MVALFATAALAACGKQGGFESLPGTGNTSQGSSDDGNSGQSGTPAPTEPAPPSAYDKMDLNGYVGGGTYENEKVLGIDKANNALLLYLPLPGAFSSLYIDVPQVKGVQIKTVMDSQQKARVAVSIPLKLIVKDRVTTLPATKLPNGNNLPMMPSGELPSLGLGLNPNSDNKVYLYFGVNAVGMFIESSLFPAFLGLTYPLKNAAATRTLGYFTIVPKSGAYNGGLFLSFILPNDLAKIIDDHLSGVIK
>NC_005363.1|WP_011165421.1|2960611_2961445_+|flagellin
MGMRVTTNISALNAQRNLVGSQRQINDSMAKLASGSRINKAADDAAGLAISEGLKAQIRSAAQAQRNANDGISMVQTAEGGLNEIGNIVVRLRELGIQAASDTVGETERGMLNKEVQQLKSEMQRIASVTTWGTTKLLDGSSPKFDFQVGLFNNSEEDRISFNASENVATLDALGLSGVDFSTKEGAQEALGMLDNAQTSISGTRANLGALQNRLTSTVDNLGVAQENLSAANSRIRDTDVAQASSEMTRNNILLQAGTSTLAQANQSNQLALKLIG
>NC_005363.1|WP_144313928.1|2973489_2974491_-|sigma-54-interacting-transcriptional-regulator
MWNTNQTSKVVENKTIVYQSEVMGSLMKMIDRVAPSQANILVLGESGTGKELIARAIHDRSGRKNKPFVAINCGALRETLLESELFGHEKGSFTGAYNRKIGLAEAANGGTLFLDEIGELDPAIQAKLLRFIQEGEVYRVGGKDPIKVDIRLICATNRELDQEVTRGNFREDLFYRINTIVVSAPPLRRRKEDIPALVNHFLNNSQHAYLNRGRSVNEEAMKALIRYEWPGNIRELQNVCERLQILSDGHMIMLNDIPENIRNGEAEKDVIAYDPAMTLHELEKRYILKALAHFGGNKTQAANNLGITIKTLYNKLHEYGEFEKFAVHTKPMK
>NC_005363.1|WP_011165433.1|2974734_2975619_+|tyrosine-type-recombinase/integrase
MAKAFKLSENIDKYLKYMTFIKSASPLTIKHYSLDLMQAFNYEDPSVKAKSISESELLSTARAAFNQWAHLSLASRNRKAATLKSFFSWAFEESLTEKDLSVQITCPKVPKKLPHFVSVDEALSVLKSFDSETKIPLKEKVLFLLLYGGGLRVSEACNLKWSEVQTSQKVLRVKGKGSKERVVALPSLTVEVLLKWKKESSFDEYVFGEKPLNSRTAYEMVRQSGIRAGLLKPLHPHALRHSFATHLLSSGANLRTLQELLGHESLQATEKYTHLGIDQLARTMENLHPLGKGK
>NC_005363.1|WP_015092087.1|2975622_2976222_-|DNA-repair-protein-RecO
MTQAQNRFIILKKMKYSESDLILHAISTQGEKLSFMARGALKSKKRFGGGVLEPTHFVSLTYKQSAEEGKLHVLQEATLINDFAGLRTDYDRLELALHILECVSKVSQEGDRHSEFLFNLLGHTLRALETAQDPLIVKMHFYLKFLLQQGVVDAEPWMAPFLKTNMADSNQLVSYRQTVDDELKNVEQMVRHYIVNATL
>NC_005363.1|WP_011165435.1|2976218_2977205_-|hypothetical-protein
MLIDVVRPETWEELNDQVKTCLGLEPRIRARAYQGLSQAVYEISQSTAHFMSHKKAIGVVQGQTSVFEGLLGYYYKETYEVNARSHSQITDVKEWVESLKKDTCFVLFSEDHPVTGELYPFADELDRLLNEKRIFSFRVSHARHFHESVEIRPYTVRLCSYTPTVSVAVLGERFRSPALQVQNQAWSEVDFVKELSSARDGRSVNQLLVEKFESEMAAVAPSFLKPGTARLYDRALCVFSDVSAEAVAQKVFSKLGLSAQEGWKRLETTNMCQWNAIKMFRHWWEPAPSSDCLRGLLVVGPELLATKDFAKLLISSYEDIKAQQSWNV
>NC_005363.1|WP_144313929.1|2977329_2977953_+|hypothetical-protein
MRLLIVSILGLFVCLLSPVAQARDLFEARLSYGMLNSDPDLNSLCVGCASSAPSVTPFYGLGADGIVTLPIPLLPGIGIRYENMEFSTSKSGLDYTAHFSRTALLLNWRPIDNLIYLGPILTYGLSHSTDLKVTEFGVKKANYSAGSPSSYTVGLEAGVKLIGFSLGAEVGYQNFQWNDATDATGNAPSQDINMNGTYGKFILGFSI
>NC_005363.1|WP_011165437.1|2978003_2979110_+|fatty-acid-desaturase
MTNKRIEWPVALFLVLNPLITLILAPIYFYNFGFQWDILLFALVFAAATNLGITAGYHRLFSHKSYDAHPIVKALFLLIGASAFQGSALKWSSDHRRHHTHIDGEKDPYNINEGFWYAHMGWMFFKDSVDQKIHAPDLEKDWMVKFQNDHYVPIAILTGFIFPMLVGWAMGSWLGGLVIAGGLRIALTQQSTFFINSLCHTLGKQTYSKEISARDSWFVAILTHGEGYHNFHHKFQIDYRNGIKWYHWDPTKWVIRTLSAMGLATKLRQISNVEILKARLQAEAAELTKHGFAEEKLAQMKEKILEAQNRMKKLREDYEQFKVDAVRKREELKEAYDHKLEELRRDMEIARLEFQMGMKQWRVYLRSV
>NC_005363.1|WP_041583614.1|2979200_2979671_+|hypothetical-protein
MLKTLSAVILSAGLTLSLPALADGFAAVFKAKYLPKKLASISPGKTTKAEVTKLLGKPLKTENKDTLLFYKTGSLDYDTTIEVKNGKVQSFYHRIPEGKVHLKDVQALLPENARKDESEVGHGEGTETQIEHDGVRLAVKNTKTSPIVSYFESAKQ
>NC_005363.1|WP_011165439.1|2979684_2981214_-|hypothetical-protein
MKRFVLLGAAAAVGLVTACTSPFKSEVKTYRHPASTDELITGSRKVLADIGNPQVFNAKTCASFVNKVTDYLYYLPADHFLPKNATEVEQLKSIGPEVMDTVFQIRVALHDKLQEFESRNELSKECILEMREGFQYARFSEEYLLDWLYTNKVFTFKKTPIMVNEKPHTWTNPKFSGFELKSGDVLLIRGKSYVSAMIARISDEEGNFSHLAVVGEDKAGKKYIVEALIQYGVIVTPLEKWRQAEDARVALYRQPDEVLAKKAARFMYDHAKGALDRKKGIRYDFAMNDDDYSDLFCSEVIRMAYDKASGGQFIVPKYRSTVSKFKNTDYPRSLGVTKTSLFSPYDIEVDPRFDFVAEYRFMPLLRQVRMQDAVMQSVYGWMIDKDYTFHWAPQHSVKAYFAKMVRQFGVAKDTLPKYMPVDSIKTNVQFEAVATLLEKNIYEKEKEFYQKKGYLPSFQDMLAINEAYRVADCKKHQEYRKQPMTVDNKPLPDESKFHWFFYNKRKKCE
>NC_005363.1|WP_011165440.1|2981389_2982856_+|class-I-SAM-dependent-methyltransferase
MSGNGAMKQEFFQIDENTRKKVIRQDRNDIEPGACFLNIPGRNLEVLNISAFGCAVLVPGAEYADLKAWWDKNPHFEADVIYKNIQTQNVSLRWARSENHSKSVTGEMIVGFEVLGEPLKVDRIKALEVSSEVISAQTEYAMHLAQLPAEFKTFVYEMKDWLEKLKSRIDKLEQESPVDSWKEAQDYRMTIADSVSDYLGQVIPMKYADVPKLVKNFTPEQMKWATDFAREQVGHLVYGAPFANRAYFKPRGYAGDYEMMNHLYRDELVGKTLFDQCMHKYFIDEPAGAAVKNRGQYLFEKITQLFERTPPTTPVKVLSVASGPAMEQQIFLQNAAPFYGRPAEFTCLDQDEESLKHAQRQLHSVERFVKSGFKFKFNNMAIRNVIAAGCPESDYDLIYSAGLFDYFTEPVAQMAAQKMLASVKPGGHVVIGNFSKDNPCVPFMELVLDWHLIYRSEEDLLRIFKGMGSKIWVEKEPLGVNLFVVIQK
>NC_005363.1|WP_011165441.1|2982873_2984316_+|adenylate/guanylate-cyclase-domain-containing-protein
MLGKEITTSQMREFEVVEEIRSVLRVIANWMAVPLFMAFWISDLIYVPQFKWLFLGLRLTIIPLCMLAKYELRKEQSFTRAQWFAALYAGLVALPINIMIYFIPDVGTGYYAGLNLVAIGGLSFIPFSTGFFVATALGIYLPYYLFTALKIQTLPDLWPVVLNSFFIIGSIVICFLIRFFHEQLRMREINSRLALKAEIANRDHIIKSKTEEAVRLNTLSTQFSPQVVQAIREGKVDLEKGVRRAQICAIFVDIVGSTERVVRLDQAKVDLVLARFMDTVVSIFLKYDITIDKFQGDGILAFANDPIRYGDYTQRTCLAALEVREALRQDREFYLMNWKKEMQIRIGISAGYANVGFYGNKKFFRSYTAIGAPLPFASRLTNLAEPDQILIDSDIAQTLQSEGFAVKNIGERVIKGFEGDTHYVFELNQAPVVRKDVSASSCPHCPDSILYLDTNAQGHFVMKCRACGYEAAEAQAVGAL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

649994 : 717039

Bacillus_phage(22.22%)

tail,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173362278.1\|649994_651335_-\|protease	Zn-dependent protease	NA	NA	NA	NA
WP_011163261.1\|651327_652749_-	TldD/PmbA family protein	NA	NA	NA	NA
WP_041583456.1\|652967_653207_+	hypothetical protein	NA	NA	NA	NA
WP_050792894.1\|653267_654437_+	EF-P lysine aminoacylase GenX	A0A2K9KZX5	Tupanvirus	5.3e-27	29.0
WP_011163264.1\|654582_656169_+	hypothetical protein	NA	NA	NA	NA
WP_162145202.1\|656387_660308_+\|tail	tail fiber domain-containing protein	K7YBB4	uncultured_Mediterranean_phage	1.7e-24	25.3
WP_011163266.1\|660427_664231_+\|tail	tail fiber domain-containing protein	E5EQB0	Micromonas_sp._RCC1109_virus	2.9e-13	52.5
WP_157865776.1\|664237_665056_-\|protease	trypsin-like serine protease	G4YAA2	Emiliania_huxleyi_virus	9.8e-12	28.4
WP_041583457.1\|665312_666560_+	TolC family protein	NA	NA	NA	NA
WP_011163269.1\|666556_667522_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_011163270.1\|667518_669471_+	ABC transporter permease	G9BWD6	Planktothrix_phage	8.0e-36	39.4
WP_011163271.1\|669563_669848_+	hypothetical protein	NA	NA	NA	NA
WP_011163272.1\|669933_670227_-	integration host factor subunit beta	A7KV42	Bacillus_phage	9.2e-13	43.0
WP_011163273.1\|670308_671568_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_144314054.1\|671572_672652_-	hypothetical protein	NA	NA	NA	NA
WP_011163275.1\|672669_673131_-	8-oxo-dGTP diphosphatase MutT	Q6UJ14	Burkholderia_virus	3.8e-05	34.6
WP_011163276.1\|673117_674101_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_011163277.1\|674100_675375_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
WP_157865643.1\|675563_677192_+	hypothetical protein	NA	NA	NA	NA
WP_011163279.1\|677192_678104_-	alpha-ketoglutarate-dependent dioxygenase AlkB	NA	NA	NA	NA
WP_011163280.1\|678220_679249_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	R9S8D5	Prochlorococcus_phage	1.7e-05	47.2
WP_011163281.1\|679260_679638_+	DOPA 4,5-dioxygenase family protein	NA	NA	NA	NA
WP_011163282.1\|679846_680326_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_011163283.1\|680353_681199_-	hypothetical protein	NA	NA	NA	NA
WP_015089873.1\|681195_681912_-	TIGR02147 family protein	NA	NA	NA	NA
WP_015089874.1\|682222_682450_+	hypothetical protein	NA	NA	NA	NA
WP_011163286.1\|682442_688322_+	hypothetical protein	NA	NA	NA	NA
WP_041583458.1\|688344_690423_+	hypothetical protein	NA	NA	NA	NA
WP_157865644.1\|690427_691063_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_050792895.1\|691167_691434_-	KH domain-containing protein	NA	NA	NA	NA
WP_011163290.1\|691636_692437_-	hypothetical protein	NA	NA	NA	NA
WP_144313922.1\|692427_693579_-	MFS transporter	NA	NA	NA	NA
WP_011163292.1\|693898_695098_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA
WP_011163293.1\|695108_696017_+	sugar kinase	NA	NA	NA	NA
WP_011163294.1\|696187_697093_+	hypothetical protein	NA	NA	NA	NA
WP_011163295.1\|697131_698820_-	GMC family oxidoreductase	NA	NA	NA	NA
WP_011163296.1\|698826_700629_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_011163297.1\|700906_701059_+	hypothetical protein	NA	NA	NA	NA
WP_011163298.1\|701123_702470_+	hypothetical protein	NA	NA	NA	NA
WP_011163299.1\|702471_703611_+	metallophosphoesterase	NA	NA	NA	NA
WP_144313924.1\|703851_705069_+	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_041583460.1\|705106_706039_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	4.5e-21	38.0
WP_011163302.1\|706482_707103_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_011163303.1\|707109_707589_+	hypothetical protein	NA	NA	NA	NA
WP_048349700.1\|707670_708099_+	hypothetical protein	NA	NA	NA	NA
WP_011163305.1\|708143_708536_-	hypothetical protein	NA	NA	NA	NA
WP_011163306.1\|708535_709732_-	hypothetical protein	NA	NA	NA	NA
WP_011163307.1\|709734_710568_-	hypothetical protein	NA	NA	NA	NA
WP_011163308.1\|710570_712142_-	hypothetical protein	NA	NA	NA	NA
WP_157865777.1\|712174_712936_-\|protease	protease	NA	NA	NA	NA
WP_011163310.1\|713233_713824_-	hypothetical protein	NA	NA	NA	NA
WP_011163311.1\|713823_716520_-	hypothetical protein	NA	NA	NA	NA
WP_144314055.1\|716547_717039_-\|protease	protease	NA	NA	NA	NA

DBSCAN-SWA_2

1346274 : 1353696

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011163917.1\|1346274_1346916_-	HD domain-containing protein	S4W232	Pandoravirus	3.7e-06	23.6
WP_011163918.1\|1346930_1347773_-	C1 family peptidase	A0A2L2DJ06	Acanthamoeba_polyphaga_mimivirus	1.0e-08	43.6
WP_041583502.1\|1348034_1348778_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_011163921.1\|1348779_1349100_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA
WP_011163922.1\|1349169_1349670_-	thermonuclease family protein	F2Y1F1	Organic_Lake_phycodnavirus	1.2e-15	46.8
WP_011163923.1\|1349706_1350618_-	S8 family serine peptidase	A0A217EQY2	Bacillus_phage	2.0e-29	37.5
WP_038448782.1\|1350794_1351904_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.7e-19	38.2
WP_157865827.1\|1352175_1353696_+	FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.0e-06	23.4

DBSCAN-SWA_3

2944960 : 2952361