CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_014246	Mobiluncus curtisii ATCC 43063, complete sequence	2 crisprs	cas2,cas1,cas6e,cas5,cas3,DEDDh,DinG,cas4,WYL	1	10	3	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_014246_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014246_1

303900-307101

Unclear

I-C,I-E,II-B

Consensus_repeat	Method
GGCTCATCCCCGCGAGTGCGGGGACCAC	CRISPRCasFinder
GGCTCATCCCCGCGAGTGCGGGGACCAC	CRT
GGCTCATCCCCGCGAGTGCGGGGACCAC	PILER-CR
GGCTCATCCCCGCGAGTGCGGGGACCAC	PILER-CR

52 spacers

cas2,cas1,cas6e,cas5

The CRISPR arrays of NC_014246_1

>merge|NC_014246|1|303900-307101|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GGATTATCCCCGCGAGTGCGGAGACCACCAGACAAACCAGTGGGAGCAATCCGAACCCCTAGGCTCATCCCCGCGAGTGCGGGGACCACTGAGAATTATCCCTGTTCAAGACGCGACCCTCAGTCTCATCCCCGCGAGTGCGGGGACCACTCTTGAATATACATTCGCACGGTGTCTTGCTCGGGCTCATCCCCGCGAGTGCGGGGACCACACACCCACGCTTTCCAGTTCGTCGAGAACCGCAGGCTCATCCCCGCGAGTGCGGGGACCACCACACGGTGGTTTTGCAATAACCGCGCTTGCCCGGCTCATCCCCGCGAGTGCGGGGACCACTACGGAAAAAGTGGCGTTCCGTTCTGTGCAATGGGGCTCATCCCCGCGAGTGCGGGGACCACCGCTTCAACAAAATCTTTTGCATCGATAAGCGCGGCTCATCCCCGCGAGTGCGGGGACCACACCGCGCCCTTGCGTAGCGCTATAACCCGTTTGGGCTCATCCCCGCGAGTGCGGGGACCACGCCCTCTGGTGGTGGATAAACTTCCCCGCTTACGGCTCATCCCCGCGAGTGCGGGGACCACCAGACCCACGAATCAAAGCCTGCTCAAAATAGGGGCTCATCCCCGCGAGTGCGGGGACCACTCGATTCTATTTTGAGACTCTGGAGAAGTGGGGGGCTCATCCCCGCGAGTGCGGGGACCACCCTGGCGATGTCGAACGCGACCTGGGCTTCGGGGGCTCATCCCCGCGAGTGCGGGGACCACTCCAGCTGCAGCTGGTTACCGCCGGCGGCGATAGGCTCATCCCCGCGAGTGCGGGGACCACTAGGTTTTCCTGTATTCGTGGTAGGCGTTGGGGGGCTCATCCCCGCGAGTGCGGGGACCACTAGATTGCCCCGTCGGGCTCTCGCATTAACATGGGCTCATCCCCGCGAGTGCGGGGACCACGATAAGCGACTGAGCAAACGTTTTCAACGCACGGGCTCATCCCCGCGAGTGCGGGGACCACGATGTGGAACAGGCTGAGAATCTGATTTGGATGGGCTCATCCCCGCGAGTGCGGGGACCACTCCGCGTTAAACAAATCTTCCCATGTGCAAATAGGCTCATCCCCGCGAGTGCGGGGACCACGGTCTGATGATGAGGTGAAAGTCCCTGTCCGGGGGCTCATCCCCGCGAGTGCGGGGACCACCACCCCGCGACGCTATGGCTAAAGCCGGTGAGCGGCTCATCCCCGCGAGTGCGGGGACCACTGGGCAATACCAGCACCAAAACAGCCACCGTTGGGCTCATCCCCGCGAGTGCGGGGACCACTAACTTTGCACGTCAGCAGCGCTTTAGGCAATCGGCTCATCCCCGCGAGTGCGGGGACCACGAAACCACCGAATACGAATTCGTACTGCGACGCCGGCTCATCCCCGCGAGTGCGGGGACCACTCTGGCTTCGATTAGTTGTCGGTTGCGGGCGTGGGCTCATCCCCGCGAGTGCGGGGACCACACCCGGTTGGCAATTCTTCACCAAACGGAGACGGGCTCATCCCCGCGAGTGCGGGGACCACCTAGGTATCAGCCTCACCGAGGCTGTAGAGGTAGGCTCATCCCCGCGAGTGCGGGGACCACAAGAACATGGCGCATTATCTGCACGTGTCCAGGGGCTCATCCCCGCGAGTGCGGGGACCACCAAGGCGTTTCTTCCATTTCTCAGCCAAGAACAGGCTCATCCCCGCGAGTGCGGGGACCACTTGAGCTTTTAGAGAACCAGGTACGGGCTGCTAGGCTCATCCCCGCGAGTGCGGGGACCACCGCGGTCGCAGCCTGGGTTGAATCCCTGCCGTGGGCTCATCCCCGCGAGTGCGGGGACCACGTAAGGGTTTTGGATCCCGCTGGCTCATAATCAGGCTCATCCCCGCGAGTGCGGGGACCACCAAAGCGCCCTCGTTATCGTTTACCCGCTCGGAGGCTCATCCCCGCGAGTGCGGGGACCACACGAACGAAACCGCGGTACAGGCAGGCAGAAGGGGCTCATCCCCGCGAGTGCGGGGACCACACCGCTTACCGCACCTACCGGGTTTGAGAGGACGGCTCATCCCCGCGAGTGCGGGGACCACTAGGTTGCCGGAGCGTCCGGGGATAGAGATTTGGGCTCATCCCCGCGAGTGCGGGGACCACAGAAGGAATGAAAACATTATCCGGCGCTGAGCGGGCTCATCCCCGCGAGTGCGGGGACCACCTCGCCCGTATAGTTCGGGTACGGATACCCCCGGGCTCATCCCCGCGAGTGCGGGGACCACGTACAGGCGGGGGGTGACGCAGCCGCGCTGATGGGCTCATCCCCGCGAGTGCGGGGACCACCATAGCCATAGCCGTGAAAACGTTCGCGGGCTGGGCTCATCCCCGCGAGTGCGGGGACCACACTGCCATCACGCAGCCCCACCCCCCAGCCGGGGGCTCATCCCCGCGAGTGCGGGGACCACGGGATAAGTACATCGGCGGTGGCATGACGCAGAGGCTCATCCCCGCGAGTGCGGGGACCACTCGACATTATGCGGGATAAAAAGGTTAACCGTGGGCTCATCCCCGCGAGTGCGGGGACCACTTTCCTATTGGAGTGATAGGGAGACAGTATGAGGGCTCATCCCCGCGAGTGCGGGGACCACAGGGTCGAGGGCTCCCGCCCAGATTGGTAGTAGGGCTCATCCCCGCGAGTGCGGGGACCACACATCGCCGGCGCCACATTTCACCAAAGCGTGCGGCTCATCCCCGCGAGTGCGGGGACCACCCGCCGGCGCCGAAGGCGCGGCGCGCCAAATTAGGCTCATCCCCGCGAGTGCGGGGACCACTCTTGTGAGCCGGTCTGCAGCTCTCTAGCGTGGGGCTCATCCCCGCGAGTGCGGGGACCACAGAGAATTAACCATTTATCCCGGCGTGTCGATGGGCTCATCCCCGCGAGTGCGGGGACCACGTGCTACCGTCGGTGCTGATGGCGAGGGTGTGGGGCTCATCCCCGCGAGTGCGGGGACCACCTTCTACCATCCAGCGGTTTATCTGCTCGGCGGGGCTCATCCCCGCGAGTGCGGGGACCACCCTTTTCCCCGTTTCGTTGGTATTTAGCCGTTTGGCTCATCCCCGCGAGTGCGGGGACCACTCTTTATTACCTCATGGAACACCATGAAACAAGGGCTCATCCCCGCGAGTGCGGGGACCAC

>NC_014246|1|1|303900-307101|CRISPRCasFinder
GGATTATCCCCGCGAGTGCGGAGACCAC	CAGACAAACCAGTGGGAGCAATCCGAACCCCTA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TGAGAATTATCCCTGTTCAAGACGCGACCCTCA
GTCTCATCCCCGCGAGTGCGGGGACCAC	TCTTGAATATACATTCGCACGGTGTCTTGCTCG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACACCCACGCTTTCCAGTTCGTCGAGAACCGCA
GGCTCATCCCCGCGAGTGCGGGGACCAC	CACACGGTGGTTTTGCAATAACCGCGCTTGCCC
GGCTCATCCCCGCGAGTGCGGGGACCAC	TACGGAAAAAGTGGCGTTCCGTTCTGTGCAATGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CGCTTCAACAAAATCTTTTGCATCGATAAGCGC
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACCGCGCCCTTGCGTAGCGCTATAACCCGTTTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GCCCTCTGGTGGTGGATAAACTTCCCCGCTTAC
GGCTCATCCCCGCGAGTGCGGGGACCAC	CAGACCCACGAATCAAAGCCTGCTCAAAATAGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCGATTCTATTTTGAGACTCTGGAGAAGTGGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CCTGGCGATGTCGAACGCGACCTGGGCTTCGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCCAGCTGCAGCTGGTTACCGCCGGCGGCGATA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TAGGTTTTCCTGTATTCGTGGTAGGCGTTGGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TAGATTGCCCCGTCGGGCTCTCGCATTAACATG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GATAAGCGACTGAGCAAACGTTTTCAACGCACG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GATGTGGAACAGGCTGAGAATCTGATTTGGATG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCCGCGTTAAACAAATCTTCCCATGTGCAAATA
GGCTCATCCCCGCGAGTGCGGGGACCAC	GGTCTGATGATGAGGTGAAAGTCCCTGTCCGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CACCCCGCGACGCTATGGCTAAAGCCGGTGAGC
GGCTCATCCCCGCGAGTGCGGGGACCAC	TGGGCAATACCAGCACCAAAACAGCCACCGTTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TAACTTTGCACGTCAGCAGCGCTTTAGGCAATC
GGCTCATCCCCGCGAGTGCGGGGACCAC	GAAACCACCGAATACGAATTCGTACTGCGACGCC
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCTGGCTTCGATTAGTTGTCGGTTGCGGGCGTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACCCGGTTGGCAATTCTTCACCAAACGGAGACG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CTAGGTATCAGCCTCACCGAGGCTGTAGAGGTA
GGCTCATCCCCGCGAGTGCGGGGACCAC	AAGAACATGGCGCATTATCTGCACGTGTCCAGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CAAGGCGTTTCTTCCATTTCTCAGCCAAGAACA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TTGAGCTTTTAGAGAACCAGGTACGGGCTGCTA
GGCTCATCCCCGCGAGTGCGGGGACCAC	CGCGGTCGCAGCCTGGGTTGAATCCCTGCCGTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GTAAGGGTTTTGGATCCCGCTGGCTCATAATCA
GGCTCATCCCCGCGAGTGCGGGGACCAC	CAAAGCGCCCTCGTTATCGTTTACCCGCTCGGA
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACGAACGAAACCGCGGTACAGGCAGGCAGAAGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACCGCTTACCGCACCTACCGGGTTTGAGAGGAC
GGCTCATCCCCGCGAGTGCGGGGACCAC	TAGGTTGCCGGAGCGTCCGGGGATAGAGATTTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	AGAAGGAATGAAAACATTATCCGGCGCTGAGCG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CTCGCCCGTATAGTTCGGGTACGGATACCCCCG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GTACAGGCGGGGGGTGACGCAGCCGCGCTGATG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CATAGCCATAGCCGTGAAAACGTTCGCGGGCTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACTGCCATCACGCAGCCCCACCCCCCAGCCGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GGGATAAGTACATCGGCGGTGGCATGACGCAGA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCGACATTATGCGGGATAAAAAGGTTAACCGTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TTTCCTATTGGAGTGATAGGGAGACAGTATGAG
GGCTCATCCCCGCGAGTGCGGGGACCAC	AGGGTCGAGGGCTCCCGCCCAGATTGGTAGTAG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACATCGCCGGCGCCACATTTCACCAAAGCGTGC
GGCTCATCCCCGCGAGTGCGGGGACCAC	CCGCCGGCGCCGAAGGCGCGGCGCGCCAAATTA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCTTGTGAGCCGGTCTGCAGCTCTCTAGCGTGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	AGAGAATTAACCATTTATCCCGGCGTGTCGATG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GTGCTACCGTCGGTGCTGATGGCGAGGGTGTGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CTTCTACCATCCAGCGGTTTATCTGCTCGGCGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CCTTTTCCCCGTTTCGTTGGTATTTAGCCGTTT
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCTTTATTACCTCATGGAACACCATGAAACAAG
GGCTCATCCCCGCGAGTGCGGGGACCAC

>NC_014246|1|1|303900-307101|CRT
GGATTATCCCCGCGAGTGCGGAGACCAC	CAGACAAACCAGTGGGAGCAATCCGAACCCCTA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TGAGAATTATCCCTGTTCAAGACGCGACCCTCA
GTCTCATCCCCGCGAGTGCGGGGACCAC	TCTTGAATATACATTCGCACGGTGTCTTGCTCG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACACCCACGCTTTCCAGTTCGTCGAGAACCGCA
GGCTCATCCCCGCGAGTGCGGGGACCAC	CACACGGTGGTTTTGCAATAACCGCGCTTGCCC
GGCTCATCCCCGCGAGTGCGGGGACCAC	TACGGAAAAAGTGGCGTTCCGTTCTGTGCAATGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CGCTTCAACAAAATCTTTTGCATCGATAAGCGC
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACCGCGCCCTTGCGTAGCGCTATAACCCGTTTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GCCCTCTGGTGGTGGATAAACTTCCCCGCTTAC
GGCTCATCCCCGCGAGTGCGGGGACCAC	CAGACCCACGAATCAAAGCCTGCTCAAAATAGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCGATTCTATTTTGAGACTCTGGAGAAGTGGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CCTGGCGATGTCGAACGCGACCTGGGCTTCGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCCAGCTGCAGCTGGTTACCGCCGGCGGCGATA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TAGGTTTTCCTGTATTCGTGGTAGGCGTTGGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TAGATTGCCCCGTCGGGCTCTCGCATTAACATG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GATAAGCGACTGAGCAAACGTTTTCAACGCACG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GATGTGGAACAGGCTGAGAATCTGATTTGGATG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCCGCGTTAAACAAATCTTCCCATGTGCAAATA
GGCTCATCCCCGCGAGTGCGGGGACCAC	GGTCTGATGATGAGGTGAAAGTCCCTGTCCGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CACCCCGCGACGCTATGGCTAAAGCCGGTGAGC
GGCTCATCCCCGCGAGTGCGGGGACCAC	TGGGCAATACCAGCACCAAAACAGCCACCGTTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TAACTTTGCACGTCAGCAGCGCTTTAGGCAATC
GGCTCATCCCCGCGAGTGCGGGGACCAC	GAAACCACCGAATACGAATTCGTACTGCGACGCC
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCTGGCTTCGATTAGTTGTCGGTTGCGGGCGTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACCCGGTTGGCAATTCTTCACCAAACGGAGACG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CTAGGTATCAGCCTCACCGAGGCTGTAGAGGTA
GGCTCATCCCCGCGAGTGCGGGGACCAC	AAGAACATGGCGCATTATCTGCACGTGTCCAGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CAAGGCGTTTCTTCCATTTCTCAGCCAAGAACA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TTGAGCTTTTAGAGAACCAGGTACGGGCTGCTA
GGCTCATCCCCGCGAGTGCGGGGACCAC	CGCGGTCGCAGCCTGGGTTGAATCCCTGCCGTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GTAAGGGTTTTGGATCCCGCTGGCTCATAATCA
GGCTCATCCCCGCGAGTGCGGGGACCAC	CAAAGCGCCCTCGTTATCGTTTACCCGCTCGGA
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACGAACGAAACCGCGGTACAGGCAGGCAGAAGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACCGCTTACCGCACCTACCGGGTTTGAGAGGAC
GGCTCATCCCCGCGAGTGCGGGGACCAC	TAGGTTGCCGGAGCGTCCGGGGATAGAGATTTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	AGAAGGAATGAAAACATTATCCGGCGCTGAGCG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CTCGCCCGTATAGTTCGGGTACGGATACCCCCG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GTACAGGCGGGGGGTGACGCAGCCGCGCTGATG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CATAGCCATAGCCGTGAAAACGTTCGCGGGCTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACTGCCATCACGCAGCCCCACCCCCCAGCCGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GGGATAAGTACATCGGCGGTGGCATGACGCAGA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCGACATTATGCGGGATAAAAAGGTTAACCGTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TTTCCTATTGGAGTGATAGGGAGACAGTATGAG
GGCTCATCCCCGCGAGTGCGGGGACCAC	AGGGTCGAGGGCTCCCGCCCAGATTGGTAGTAG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACATCGCCGGCGCCACATTTCACCAAAGCGTGC
GGCTCATCCCCGCGAGTGCGGGGACCAC	CCGCCGGCGCCGAAGGCGCGGCGCGCCAAATTA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCTTGTGAGCCGGTCTGCAGCTCTCTAGCGTGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	AGAGAATTAACCATTTATCCCGGCGTGTCGATG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GTGCTACCGTCGGTGCTGATGGCGAGGGTGTGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CTTCTACCATCCAGCGGTTTATCTGCTCGGCGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CCTTTTCCCCGTTTCGTTGGTATTTAGCCGTTT
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCTTTATTACCTCATGGAACACCATGAAACAAG
GGCTCATCCCCGCGAGTGCGGGGACCAC

>NC_014246|1|1|303961-307101|PILER-CR
GGCTCATCCCCGCGAGTGCGGGGACCAC	TGAGAATTATCCCTGTTCAAGACGCGACCCTCA
GTCTCATCCCCGCGAGTGCGGGGACCAC	TCTTGAATATACATTCGCACGGTGTCTTGCTCG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACACCCACGCTTTCCAGTTCGTCGAGAACCGCA
GGCTCATCCCCGCGAGTGCGGGGACCAC	CACACGGTGGTTTTGCAATAACCGCGCTTGCCC
GGCTCATCCCCGCGAGTGCGGGGACCAC	TACGGAAAAAGTGGCGTTCCGTTCTGTGCAATGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CGCTTCAACAAAATCTTTTGCATCGATAAGCGC
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACCGCGCCCTTGCGTAGCGCTATAACCCGTTTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GCCCTCTGGTGGTGGATAAACTTCCCCGCTTAC
GGCTCATCCCCGCGAGTGCGGGGACCAC	CAGACCCACGAATCAAAGCCTGCTCAAAATAGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCGATTCTATTTTGAGACTCTGGAGAAGTGGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CCTGGCGATGTCGAACGCGACCTGGGCTTCGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCCAGCTGCAGCTGGTTACCGCCGGCGGCGATA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TAGGTTTTCCTGTATTCGTGGTAGGCGTTGGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TAGATTGCCCCGTCGGGCTCTCGCATTAACATG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GATAAGCGACTGAGCAAACGTTTTCAACGCACG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GATGTGGAACAGGCTGAGAATCTGATTTGGATG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCCGCGTTAAACAAATCTTCCCATGTGCAAATA
GGCTCATCCCCGCGAGTGCGGGGACCAC	GGTCTGATGATGAGGTGAAAGTCCCTGTCCGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CACCCCGCGACGCTATGGCTAAAGCCGGTGAGC
GGCTCATCCCCGCGAGTGCGGGGACCAC	TGGGCAATACCAGCACCAAAACAGCCACCGTTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TAACTTTGCACGTCAGCAGCGCTTTAGGCAATC
GGCTCATCCCCGCGAGTGCGGGGACCAC	GAAACCACCGAATACGAATTCGTACTGCGACGCC
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCTGGCTTCGATTAGTTGTCGGTTGCGGGCGTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACCCGGTTGGCAATTCTTCACCAAACGGAGACG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CTAGGTATCAGCCTCACCGAGGCTGTAGAGGTA
GGCTCATCCCCGCGAGTGCGGGGACCAC	AAGAACATGGCGCATTATCTGCACGTGTCCAGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CAAGGCGTTTCTTCCATTTCTCAGCCAAGAACA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TTGAGCTTTTAGAGAACCAGGTACGGGCTGCTA
GGCTCATCCCCGCGAGTGCGGGGACCAC	CGCGGTCGCAGCCTGGGTTGAATCCCTGCCGTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GTAAGGGTTTTGGATCCCGCTGGCTCATAATCA
GGCTCATCCCCGCGAGTGCGGGGACCAC	CAAAGCGCCCTCGTTATCGTTTACCCGCTCGGA
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACGAACGAAACCGCGGTACAGGCAGGCAGAAGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACCGCTTACCGCACCTACCGGGTTTGAGAGGAC
GGCTCATCCCCGCGAGTGCGGGGACCAC	TAGGTTGCCGGAGCGTCCGGGGATAGAGATTTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	AGAAGGAATGAAAACATTATCCGGCGCTGAGCGGGCTCATCCCCGCGAGTGCGGGGACCACCTCGCCCGTATAGTTCGGGTACGGATACCCCCGGGCTCATCCCCGCGAGTGCGGGGACCACGTACAGGCGGGGGGTGACGCAGCCGCGCTGATGGGCTCATCCCCGCGAGTGCGGGGACCACCATAGCCATAGCCGTGAAAACGTTCGCGGGCTGGGCTCATCCCCGCGAGTGCGGGGACCACACTGCCATCACGCAGCCCCACCCCCCAGCCGGGGGCTCATCCCCGCGAGTGCGGGGACCACGGGATAAGTACATCGGCGGTGGCATGACGCAGAGGCTCATCCCCGCGAGTGCGGGGACCACTCGACATTATGCGGGATAAAAAGGTTAACCGTGGGCTCATCCCCGCGAGTGCGGGGACCACTTTCCTATTGGAGTGATAGGGAGACAGTATGAGGGCTCATCCCCGCGAGTGCGGGGACCACAGGGTCGAGGGCTCCCGCCCAGATTGGTAGTAGGGCTCATCCCCGCGAGTGCGGGGACCACACATCGCCGGCGCCACATTTCACCAAAGCGTGCGGCTCATCCCCGCGAGTGCGGGGACCACCCGCCGGCGCCGAAGGCGCGGCGCGCCAAATTAGGCTCATCCCCGCGAGTGCGGGGACCACTCTTGTGAGCCGGTCTGCAGCTCTCTAGCGTGGGGCTCATCCCCGCGAGTGCGGGGACCACAGAGAATTAACCATTTATCCCGGCGTGTCGATGGGCTCATCCCCGCGAGTGCGGGGACCACGTGCTACCGTCGGTGCTGATGGCGAGGGTGTGGGGCTCATCCCCGCGAGTGCGGGGACCACCTTCTACCATCCAGCGGTTTATCTGCTCGGCGGGGCTCATCCCCGCGAGTGCGGGGACCACCCTTTTCCCCGTTTCGTTGGTATTTAGCCGTTTGGCTCATCCCCGCGAGTGCGGGGACCACTCTTTATTACCTCATGGAACACCATGAAACAAG
	CTCGCCCGTATAGTTCGGGTACGGATACCCCCG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GTACAGGCGGGGGGTGACGCAGCCGCGCTGATG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CATAGCCATAGCCGTGAAAACGTTCGCGGGCTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACTGCCATCACGCAGCCCCACCCCCCAGCCGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GGGATAAGTACATCGGCGGTGGCATGACGCAGA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCGACATTATGCGGGATAAAAAGGTTAACCGTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TTTCCTATTGGAGTGATAGGGAGACAGTATGAG
GGCTCATCCCCGCGAGTGCGGGGACCAC	AGGGTCGAGGGCTCCCGCCCAGATTGGTAGTAG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACATCGCCGGCGCCACATTTCACCAAAGCGTGC
GGCTCATCCCCGCGAGTGCGGGGACCAC	CCGCCGGCGCCGAAGGCGCGGCGCGCCAAATTA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCTTGTGAGCCGGTCTGCAGCTCTCTAGCGTGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	AGAGAATTAACCATTTATCCCGGCGTGTCGATG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GTGCTACCGTCGGTGCTGATGGCGAGGGTGTGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CTTCTACCATCCAGCGGTTTATCTGCTCGGCGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CCTTTTCCCCGTTTCGTTGGTATTTAGCCGTTT
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCTTTATTACCTCATGGAACACCATGAAACAAG
GGCTCATCCCCGCGAGTGCGGGGACCAC

>NC_014246|1|2|306098-307101|PILER-CR
	TGAGAATTATCCCTGTTCAAGACGCGACCCTCA
GTCTCATCCCCGCGAGTGCGGGGACCAC	TCTTGAATATACATTCGCACGGTGTCTTGCTCG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACACCCACGCTTTCCAGTTCGTCGAGAACCGCA
GGCTCATCCCCGCGAGTGCGGGGACCAC	CACACGGTGGTTTTGCAATAACCGCGCTTGCCC
GGCTCATCCCCGCGAGTGCGGGGACCAC	TACGGAAAAAGTGGCGTTCCGTTCTGTGCAATGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CGCTTCAACAAAATCTTTTGCATCGATAAGCGC
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACCGCGCCCTTGCGTAGCGCTATAACCCGTTTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GCCCTCTGGTGGTGGATAAACTTCCCCGCTTAC
GGCTCATCCCCGCGAGTGCGGGGACCAC	CAGACCCACGAATCAAAGCCTGCTCAAAATAGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCGATTCTATTTTGAGACTCTGGAGAAGTGGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CCTGGCGATGTCGAACGCGACCTGGGCTTCGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCCAGCTGCAGCTGGTTACCGCCGGCGGCGATA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TAGGTTTTCCTGTATTCGTGGTAGGCGTTGGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TAGATTGCCCCGTCGGGCTCTCGCATTAACATG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GATAAGCGACTGAGCAAACGTTTTCAACGCACG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GATGTGGAACAGGCTGAGAATCTGATTTGGATG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCCGCGTTAAACAAATCTTCCCATGTGCAAATA
GGCTCATCCCCGCGAGTGCGGGGACCAC	GGTCTGATGATGAGGTGAAAGTCCCTGTCCGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CACCCCGCGACGCTATGGCTAAAGCCGGTGAGC
GGCTCATCCCCGCGAGTGCGGGGACCAC	TGGGCAATACCAGCACCAAAACAGCCACCGTTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TAACTTTGCACGTCAGCAGCGCTTTAGGCAATC
GGCTCATCCCCGCGAGTGCGGGGACCAC	GAAACCACCGAATACGAATTCGTACTGCGACGCC
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCTGGCTTCGATTAGTTGTCGGTTGCGGGCGTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACCCGGTTGGCAATTCTTCACCAAACGGAGACG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CTAGGTATCAGCCTCACCGAGGCTGTAGAGGTA
GGCTCATCCCCGCGAGTGCGGGGACCAC	AAGAACATGGCGCATTATCTGCACGTGTCCAGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CAAGGCGTTTCTTCCATTTCTCAGCCAAGAACA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TTGAGCTTTTAGAGAACCAGGTACGGGCTGCTA
GGCTCATCCCCGCGAGTGCGGGGACCAC	CGCGGTCGCAGCCTGGGTTGAATCCCTGCCGTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GTAAGGGTTTTGGATCCCGCTGGCTCATAATCA
GGCTCATCCCCGCGAGTGCGGGGACCAC	CAAAGCGCCCTCGTTATCGTTTACCCGCTCGGA
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACGAACGAAACCGCGGTACAGGCAGGCAGAAGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACCGCTTACCGCACCTACCGGGTTTGAGAGGAC
GGCTCATCCCCGCGAGTGCGGGGACCAC	TAGGTTGCCGGAGCGTCCGGGGATAGAGATTTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	AGAAGGAATGAAAACATTATCCGGCGCTGAGCGGGCTCATCCCCGCGAGTGCGGGGACCACCTCGCCCGTATAGTTCGGGTACGGATACCCCCGGGCTCATCCCCGCGAGTGCGGGGACCACGTACAGGCGGGGGGTGACGCAGCCGCGCTGATGGGCTCATCCCCGCGAGTGCGGGGACCACCATAGCCATAGCCGTGAAAACGTTCGCGGGCTGGGCTCATCCCCGCGAGTGCGGGGACCACACTGCCATCACGCAGCCCCACCCCCCAGCCGGGGGCTCATCCCCGCGAGTGCGGGGACCACGGGATAAGTACATCGGCGGTGGCATGACGCAGAGGCTCATCCCCGCGAGTGCGGGGACCACTCGACATTATGCGGGATAAAAAGGTTAACCGTGGGCTCATCCCCGCGAGTGCGGGGACCACTTTCCTATTGGAGTGATAGGGAGACAGTATGAGGGCTCATCCCCGCGAGTGCGGGGACCACAGGGTCGAGGGCTCCCGCCCAGATTGGTAGTAGGGCTCATCCCCGCGAGTGCGGGGACCACACATCGCCGGCGCCACATTTCACCAAAGCGTGCGGCTCATCCCCGCGAGTGCGGGGACCACCCGCCGGCGCCGAAGGCGCGGCGCGCCAAATTAGGCTCATCCCCGCGAGTGCGGGGACCACTCTTGTGAGCCGGTCTGCAGCTCTCTAGCGTGGGGCTCATCCCCGCGAGTGCGGGGACCACAGAGAATTAACCATTTATCCCGGCGTGTCGATGGGCTCATCCCCGCGAGTGCGGGGACCACGTGCTACCGTCGGTGCTGATGGCGAGGGTGTGGGGCTCATCCCCGCGAGTGCGGGGACCACCTTCTACCATCCAGCGGTTTATCTGCTCGGCGGGGCTCATCCCCGCGAGTGCGGGGACCACCCTTTTCCCCGTTTCGTTGGTATTTAGCCGTTTGGCTCATCCCCGCGAGTGCGGGGACCACTCTTTATTACCTCATGGAACACCATGAAACAAG
	CTCGCCCGTATAGTTCGGGTACGGATACCCCCG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GTACAGGCGGGGGGTGACGCAGCCGCGCTGATG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CATAGCCATAGCCGTGAAAACGTTCGCGGGCTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACTGCCATCACGCAGCCCCACCCCCCAGCCGGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GGGATAAGTACATCGGCGGTGGCATGACGCAGA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCGACATTATGCGGGATAAAAAGGTTAACCGTG
GGCTCATCCCCGCGAGTGCGGGGACCAC	TTTCCTATTGGAGTGATAGGGAGACAGTATGAG
GGCTCATCCCCGCGAGTGCGGGGACCAC	AGGGTCGAGGGCTCCCGCCCAGATTGGTAGTAG
GGCTCATCCCCGCGAGTGCGGGGACCAC	ACATCGCCGGCGCCACATTTCACCAAAGCGTGC
GGCTCATCCCCGCGAGTGCGGGGACCAC	CCGCCGGCGCCGAAGGCGCGGCGCGCCAAATTA
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCTTGTGAGCCGGTCTGCAGCTCTCTAGCGTGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	AGAGAATTAACCATTTATCCCGGCGTGTCGATG
GGCTCATCCCCGCGAGTGCGGGGACCAC	GTGCTACCGTCGGTGCTGATGGCGAGGGTGTGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CTTCTACCATCCAGCGGTTTATCTGCTCGGCGG
GGCTCATCCCCGCGAGTGCGGGGACCAC	CCTTTTCCCCGTTTCGTTGGTATTTAGCCGTTT
GGCTCATCCCCGCGAGTGCGGGGACCAC	TCTTTATTACCTCATGGAACACCATGAAACAAG
GGCTCATCCCCGCGAGTGCGGGGACCAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014246.1\|WP_041797867.1\|307234_307585_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244
NC_014246.1\|WP_041797864.1\|299933_302087_-\|alpha-galactosidase	unknown	unknown	gnl\|CDD\|307952
NC_014246.1\|WP_004008243.1\|292996_293683_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319968
NC_014246.1\|WP_013188674.1\|296592_298005_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
NC_014246.1\|WP_013188686.1\|309194_309899_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NC_014246.1\|WP_013188688.1\|312228_313200_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NC_014246.1\|WP_013188675.1\|298001_298982_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NC_014246.1\|WP_013188690.1\|316591_317995_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NC_014246.1\|WP_004008268.1\|315674_316595_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226354
NC_014246.1\|WP_004009971.1\|291010_292021_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226467
NC_014246.1\|WP_013188685.1\|307581_308475_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|187850
NC_014246.1\|WP_013188677.1\|302183_303434_+\|ROK-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224851
NC_014246.1\|WP_013188689.1\|314900_315674_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|368639
NC_014246.1\|WP_013188673.1\|294608_296426_+\|glycoside-hydrolase-family-2	unknown	unknown	gnl\|CDD\|236657
NC_014246.1\|WP_004008263.1\|311320_312232_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NC_014246.1\|WP_013188671.1\|292032_292962_+\|hypothetical-protein	unknown	unknown	unknown
NC_014246.1\|WP_004008248.1\|298971_299910_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NC_014246.1\|WP_013188672.1\|293873_294356_-\|isoprenylcysteine-carboxylmethyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224931
NC_014246.1\|WP_004008265.1\|313385_314675_-\|carbohydrate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224567
NC_014246.1\|WP_004008257.1\|308532_309195_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050

Protein	Function_ID	Function_description	E-value
NC_014246.1\|WP_041797867.1\|307234_307585_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	2.67924e-42
NC_014246.1\|WP_041797864.1\|299933_302087_-\|alpha-galactosidase	gnl\|CDD\|307952	pfam02065, Melibiase, Melibiase. Glycoside hydrolase families GH27, GH31 and GH36 form the glycoside hydrolase clan GH-D. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36A-B and GH36D-K and from GH27.	2.73456e-137
NC_014246.1\|WP_004008243.1\|292996_293683_+\|VOC-family-protein	gnl\|CDD\|319968	cd16361, VOC_ShValD_like, vicinal oxygen chelate (VOC) family protein similar to Streptomyces hygroscopicus ValD protein. This subfamily of vicinal oxygen chelate (VOC) family protein includes Streptomyces hygroscopicus ValD protein and similar proteins. ValD protein functions in validamycin biosynthetic pathway. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	4.99543e-18
NC_014246.1\|WP_013188674.1\|296592_298005_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.77492e-66
NC_014246.1\|WP_013188686.1\|309194_309899_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.23872e-40
NC_014246.1\|WP_013188688.1\|312228_313200_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.09265e-66
NC_014246.1\|WP_013188675.1\|298001_298982_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	6.53454e-85
NC_014246.1\|WP_013188690.1\|316591_317995_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.88464e-58
NC_014246.1\|WP_004008268.1\|315674_316595_-\|sugar-ABC-transporter-permease	gnl\|CDD\|226354	COG3833, MalG, ABC-type maltose transport systems, permease component [Carbohydrate transport and metabolism].	2.29999e-87
NC_014246.1\|WP_004009971.1\|291010_292021_+\|hypothetical-protein	gnl\|CDD\|226467	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism].	2.47624e-131
NC_014246.1\|WP_013188685.1\|307581_308475_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187850	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	4.04086e-122
NC_014246.1\|WP_013188677.1\|302183_303434_+\|ROK-family-transcriptional-regulator	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	2.30909e-28
NC_014246.1\|WP_013188689.1\|314900_315674_-\|ABC-transporter-permease	gnl\|CDD\|368639	pfam05857, TraX, TraX protein. This family consists of several bacterial TraX proteins. TraX is responsible for the amino-terminal acetylation of F-pilin subunits.	8.32035e-09
NC_014246.1\|WP_013188673.1\|294608_296426_+\|glycoside-hydrolase-family-2	gnl\|CDD\|236657	PRK10150, PRK10150, beta-D-glucuronidase; Provisional.	2.10478e-35
NC_014246.1\|WP_004008263.1\|311320_312232_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	2.16671e-68
NC_014246.1\|WP_004008248.1\|298971_299910_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	5.61887e-80
NC_014246.1\|WP_013188672.1\|293873_294356_-\|isoprenylcysteine-carboxylmethyltransferase-family-protein	gnl\|CDD\|224931	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones].	2.11232e-14
NC_014246.1\|WP_004008265.1\|313385_314675_-\|carbohydrate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	2.84791e-31
NC_014246.1\|WP_004008257.1\|308532_309195_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	1.10434e-77

>NC_014246.1|WP_013188677.1|302183_303434_+|ROK-family-transcriptional-regulator
MKHFPHILFRFSVKTAATQRERETMTRLFDDSSLATAAHILAHGPLSRADTARDLELSPATLTRLVRPLMKSGMITEVRSGVSKTGMGRPTQLLAVPPDQHAFIGVNLTGTMIHCVRTDANARILSREAVPVESHAPEDCLHQLCAVIRRQIGNQDDSQLEGIGISLGGKIDSSRIKENRFLGWQNVDLHSITHEINSSSHPDIEFVNDVTGLTMLEQWFGLGRKCEDFVVATIGAGIGNGMVHNLRAVRSPLSGLGTTSHIPLAGAHGVCQYGHVGCANGALTLPAVLSRAQTGRAITNSDSAPTSAEELINLADYGDKSCRRAIIEFTENLAIYVQTVASAALVLDVVLDGEGVCLLESRWADNFDKHLKSYGRPNDPRIRVHRRSGSFDRWAQGAAVAAIVKWLIRTTGSTKW
>NC_014246.1|WP_041797864.1|299933_302087_-|alpha-galactosidase
MANFSRLIHLRNGGTSLCLRITERGVPQVIYWGTDLGYLSSAQCEEISKSQYSAVVSGTSDIPPLFSLVPQQSEGWIGTPGLIGSRQSGALFSAFIPIDVQTDGQGTNGAPSEVTVTLHDEEADINLTIAVEVTPSGVIRGQAKVINTGADGYEVQSLLLGLPTPASETYVLDQTGHHLRERDIQKHEFTIGSHQREINVARGHTISSIHGTCQPNTSWQDGLVHYVHVAWSGNTRTIAEKDTQGYQGILAGELLFPGEVVLKRGEEYCSPWIVGTWGHGLDEAAARMHSFVRSRTAHPATERPVTLNAWEAVYFDQSLPRLLKLVDLAAEAGAERFVLDDGWFSGRRDDTSSLGDWTVSAEVWPDGLSPLADAVHSKGMQFGLWFEPEMVNPNSQVAREHPDWMLSPRTHRPQEARYQQVMDLTNPKAFEHVKGQMLEVLDSTQIEYIKWDFNRDLYEAVSPTTGCPVYHQQTLATYRLLRDIKEAHPHLEIESCAGGGGRIDLGIMEYAVRIWGSDCTDPIERKQIEAGTCLLLPPELIGSHVASPVSHQTGRTLNLSLRASNALFSHMGIEWDLTTASASELKELASWVALHKELRPMLHSGRVVHLDHPDRGYWVHGVVSVDQTRAVYAVTRLHSSPQRPSPALCLPGLEATTTYRVREMLPQGVESEIGNGQGSVPWWGTGLELPGSVLEHSGIRFPDLNPLQTVLLEVSAR
>NC_014246.1|WP_004008248.1|298971_299910_-|sugar-ABC-transporter-permease
MLRKETRMETSSDVVSTRKQRPVIISRQARYALIFLIPAGIGLFFFYLLPAVRGFYFSFTDYAVLTPARWTGLANYQRLIFDPLFWNAVKVTVYYVVLNIGFQTIIAIGLAVLLQRLTNSTLIRGMALLPYFIANVVVALVWYFMMDYQIGIVNEMLNWIGLDRVAFFGESAWAIPTVAFVNVWRHMGYTALLIFAGLQTINRTVWEAADIDGAGEIRKFFSITLPLLRPVLAMVMVVTITGSFQIFDTVAITTKGGPINATRVIYYYIWDLAFGQLDFGYASAIAMVLFVLLFGISLIQLRLMRAGESDEL
>NC_014246.1|WP_013188675.1|298001_298982_-|carbohydrate-ABC-transporter-permease
MNCEELKMTTTTLKTATKQTDKHPHMGHTGKIGSKKHHGLGFYCAWGCLIILLIITVFPFLWMLRSSLMTNTELLAHPGTIWPKNPTFDAYRRVFGMTTPEESLTQGGAGASINFWLYLRNSCIVASTVMVGQTLFSAMAAYAFSRLRWRGREVVFAIFLSALMVPAIFTAIPNFVLIKQLGLLNTFAGIVLPTFFMTPFSIFFLRQFFLGIPREIDEAAMIDGAGPFKVFFRVICPMTSAPIITLAVLTFINAWNDYMWPLLVGQSDRVRVLTVALGIFRSQKPQGSPDWTALMAAALVSALPIIILFTILGKRIVNSVGFSGIK
>NC_014246.1|WP_013188674.1|296592_298005_-|sugar-ABC-transporter-substrate-binding-protein
MRLDMKNSVIAVSGRRFMVAALAAVLAGILTVGLTSCSSQVSGKPGQTTLRYWLWDSGQLPGYRQCAADFERENPDVHIQIEQFGWDDYWTQITASMVAENAPDVFTDHTSQFGKYSALGQLLDIDPYVKRDNYDLSHYAAGLADQWKSADGKHRYGLPKDWDTEAIFYNEDMVKAAGYTKDDLWKLEWNPQDGGSFEKFLARLTVDVNGVHGDEPGFDKKHVKVYGTGYNDTGGGLGQIQWSPYALSNGEWRWTEKNPWGMHFNYDDPKFQETIGWWISLIKKGYMPPLSVATSGVGTVESLGSGSYATLLEGSWNISTIDNATDLPIQVAPTPIGPDGHRASVTNGLADSIWVGTKHPQESWRWVKYLGSAKCQDVIAEQGTVFPAITTSTDKAIKTFEDMGYDARAFSVHLEDKTTVPSLVVDRWAQVDALMKPAMASVMSFESEPSSLTEANRRVNALMSANRGKR
>NC_014246.1|WP_013188673.1|294608_296426_+|glycoside-hydrolase-family-2
MNYLRSEYPRPQFERENWQNLNGTWDFRFDDDDKGLRERWYMPDSPFPMQINVPFVYECELSGINTREQHDIIWYKRNFDAPSLTPQQHLLLHFGAVDYQTQVFLNGQMVKEHTGGETPFSVDITPFLTEGTTQNLCLRVYDPLTNQEIPRGKQFWKSTPKGIWYTRSSGIWQTVWTEVVNEQRIESLAIKPDLDSGSVEFTVHTKTSSSNTWLKVQIHYQDKLFVETQIKCVGPTLKFSVDIFGSDIFRTGFHGADEYIWSPEYPNLFTVELTLSDINSNLELDSVSSYFGMRKIHTENGIIYLNNKPYYQKLVLDQGYWPRSLLTAPTDDDYRLDISLAKEMGFNGCRKHQKLEDPRFLYWADQLGFLVWEECSSTPLFTTESQIAIFDSWKAVYQRDRNHPCIVAWVPLNESWGVPQIHSNQRQQHWAQALYHLLRSLDDTRLVSSNDGWDQTITDICAIHNYKLGKDADDSEFTQFCETLTSKEALVSQFVSGHPVYAAGFGYRGEPILITECGGIGFANNQNSDWSYLGVSSAAEFLATYRRLISTLRSSQYVQGFCYTQLTDVEQEVNGLLTYERTPKFDLKELRQINAINDLPSQNLT
>NC_014246.1|WP_013188672.1|293873_294356_-|isoprenylcysteine-carboxylmethyltransferase-family-protein
MLGVGPFYVSGIFIVTVSATIFRYLGWLRIGTIDNLWIRILLILIAIVLMVESVIVWCLAVFGSRMVESVKTGQLMTTGIYAWVRHPVYTAFFLLNTGILISQTNWCLMALPFVYWLALSILLKRTEERWLQQKFGAQYARYAARVNRVLPWPPRGPETI
>NC_014246.1|WP_004008243.1|292996_293683_+|VOC-family-protein
MKTTCRKATKLGALVLLGYGVKLAVDNALELKKLGKEEFLERKQRECRNKMNSIGINWGLGHVGVTVANFERAVQWYDRVFGLKLMNYLEITGDDLKPVERLYHVEGIKRVRLGFMCSRSGNILELFEFDPPVVTDERETWNRPGYSHIAFHVSNVPGWVNRLRREGAEFMNEPVHSSGADWAFFRDPDGNLVELIDLHAARLGLGRLGVLIGTVMKHTALKGFYRKV
>NC_014246.1|WP_013188671.1|292032_292962_+|hypothetical-protein
MTKETKQSSAPPQATQTDKACGESCEKKTKAKPFPMGPNPSIDDEVRYANVVFLNAVIPLLKPIVAEKPELAAAFKGKEGVVQISCLTPAGTSIDGRPERYATHLIIHGASITPKLGAHPLPNVEIEFPSPEKLNDFFKGKVNLPKIRGGLSNPGLLVATVKALLAMSSLLGATAAPKIEDDRKLLTKCMFYLLTTGMSQLNKAGHPGVHAWTDPSPDRVYAYVVDGHPELGAYIRIKAGKSKAFRGEYTRSAAFFTMRFDSVTSALGTLLQTDDLLDAQASGRMSMEGSPEYGAELGALMMAVGDYAK
>NC_014246.1|WP_004009971.1|291010_292021_+|hypothetical-protein
MAGGLTYTSIDAVNLTTAEVYGQTLVQLGKEDSTIVGLSADLAKSTKISVFAKEFPERFYNVGIAEQNMFGIAAGLAKAGLLPFVSTFGAFAALRACEQIRTDICYQNLNVKIIGTHSGLSFGAAGTTHHVTEDIAILRSFANLVVMCPADGLEAAYCVQAAYEHQGPVYIRLNRGFDQIVYRDEIPTFEFGKANTLREGTDLTFIATGSGVWRALQAADILAKEDGLSVRVLDIHTLKPIDEDAIAKAITETRRIITVEDHNIINGLGTAVADVGATTRKGFVLKKLGIPDEFSVIGQPEDLYSHYGWDENGCVAAAREVMHMDFEEDDDWEDEF
>NC_014246.1|WP_041797867.1|307234_307585_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MMVLNVTAVPAGLRGDLTKWLIEIAPGVFVGNPSARVRDLLWERTVALCKDGRALLIFSSNNEQGMEFRTHRHSWIPTDFDGVTLMMRPSGDGQQYYSRRTGWSIARHQGRKRRGV
>NC_014246.1|WP_013188685.1|307581_308475_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MEDRLSFLYVERAILNREGNALTIQDSRGIAHIPATQVGVVLLGPGTKVTYAAMALLGDAGCSAVWVGEKGVRYYAHGRPAAKTSRMAEAHARLWANQRSRLRCARRMYSMRFPGEDVSNLPLSQLRGREGARMKRIYAEQSRRTGVPWTRRSYDPNDFGAGDPINCALTEGAAALYGIAHAVVVGLGFIPSLGIIHSGTDRAFVYDVADLYKAEISIPAAFEAVAASAEGDELNVRKRIRDKVVTTRLMQRMVRDLQYVMEIPTDDAYIDANLLLWDELEVIAAGVNWADEDSVLR
>NC_014246.1|WP_004008257.1|308532_309195_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MATFTKILLNPARRQGRKLLTNPQAVHAAVCACFPPDMNQNQGRVLWRLDQRSHENILYIVGPEKPTAVHIVEQAGWDTRPAQSAEYDRLLGQLKKGQQWNFELVANPTKSLRRGGEQRGRVVALLSAPDQLAWLHSKAESMGVSFGTLEESTAQVGERESISFKRNFSAESSPKVHLVKVRYRGYLEVIDAEKLRQTLVGGVGRAKGYGCGLLTLARIQ
>NC_014246.1|WP_013188686.1|309194_309899_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSYSLLLLLKGPLQSWGDESRYTTRATGSTPSKSGVIGLLAAAQGRHRTDPLEDLVRLDYAVRVDQSGALLRDYQTSQPWQKDPNASAKLVSRYFLSDAAFVAAIGAENRSILEGLQGNLYQPAYPLFLGRRSCPAPANLDLGIVEGNVVTALMEHEEWHATLSHKKERGEEVLLPIYRDGKPGEAGTPRQDVPISFSQEHRRYGWRTVVYAGAKQIKNEYGTSLDPFFEAVIS
>NC_014246.1|WP_004008263.1|311320_312232_-|carbohydrate-ABC-transporter-permease
MSSATAIDAGAAAITTKKVNVNGSVGKKRGGVNVGKVIRYVLLIFFLAMVLMPVYVLLITSFKGAGDADPSRTWYLPAEWNTDNWARAWDQLQGGLLRSLMLVIPSSIISAMLGSANGFVLSRWRFPGANVVFTLILFGMFIPYQAVMIPMMRMVVASQIGFGIHTLILMHIIYGIPITTLIFRNYYESVPRDLIEAARIDGAGMLRTYFNVVLPISIPSFVVVLIWQFTSAWNDFLFALFFGGGSQRGPVTLSLNELAHGSIMADYGGSMAGALIASVPTLLVYIALGKYFVGGMMAGSVKG
>NC_014246.1|WP_013188688.1|312228_313200_-|sugar-ABC-transporter-permease
MSGNVAVKTPEKARTPQKRQRTRSSNGIKQWGPGLLLVSPSIILVAVFVYGLLGSNLFTSLQDNHSAPQVSGVQPVNFVGFANFVALFADKDFQHSLINLLMFTVMFLVGTLFFGFIWAWLLDKPIKGEGIFRSVFLFPMAVSFIASGVVWRWMLNSAQGENASGLNRLLQMIGLGGLQNDWISNPTFGVLAVGIPAVWQLSGYVMALFLAGFRGIPDDLREAGRVDGANEWQLYRYIIFPQLAPVALSAAIIIGHMSLKSFDLIMAVADQTFYQTKVPAIDMYNFMTVSDYSNAAAVGTVLLVIVALLVVPYLIHDAKESSR
>NC_014246.1|WP_004008265.1|313385_314675_-|carbohydrate-ABC-transporter-substrate-binding-protein
MRKLIAAAGALALGLTMTACSQASDAGKDGGDAAGSASQVGVVTWWEQGSEKEGFDALKKVFAEQHPDVELVKQSESGGGGSNAKQKLAADLAAKNPPDTYQAHAGAELSSDIAAGYLEDVSALYDEFKLRDAFPADLIDLLTVDGKIYSIPSNIHRANVVWANVEVMQKAGLDPKAPPKDIKGWIADMEKLKAAGVKYPITVGATWTQLELLETVLISDLGTDAYNGLMNGKTDWKGAEVKAALEDYAKILTYADPSLLSEDWEPAMKPVIEGKSAYNVMGDWAPPAWENAKMTWGKDYVTFPVPGNEGVFDFLADSFTLPVGAKHPDGTKAWLNTISSKEGQIAFNSVKGSIPARSDLTDDELSKFSDYQRSAMESFGKDTIVSSIAHGAALPLAATEKMKSALGKFNSSKDVAALQSELAAAAAAK
>NC_014246.1|WP_013188689.1|314900_315674_-|ABC-transporter-permease
MASSTNGVPETGPERLRGLSNFRLKVIAGVFLSFQVASTTVIPYFFGTDLKNNFGALTAVVLSEVVSWCAVPIYAWLLAEGFTWTANRWHYLWRLVILALVCEVPYDLVTFHRPVDWASQNPVFGLALALLVLILIDFIRRRWSGAQAWMGALAVAGAGVLWALLLHLGTRQGVINIGCLLIGFALIFYLLRLRENTMMMTAGLLGAVSLVTPAIGVAFLHYRNETLGYRNSNTRWFCYAVYPLLLMLGAAWGTLLV
>NC_014246.1|WP_004008268.1|315674_316595_-|sugar-ABC-transporter-permease
MNTSAPSTAVEVTPRAGSKTSIMGSLSKRRMVGDIVVHTFLAIMAVIWMLPIVWVVAESFNKDPAPYTKTFFPKEFSLDNYIKIFTDRSVMDFPRMYLNTFIIACFTCVISVFFVLMVAYVMSRMRFRLRRTFMSVVLILGMFPGIMAVSAIYFILKAVGLTGGGMTILALILVYSAGSGAGFYVMKGYMDTIPNSLDEAAILDGCTRSQVFWKIILPICKPMIVYQAIVSFLGPWLDFVMAKVIARTQSDYTVALGLWLMLEKEYIHTWFARFAAGAVLVSVPIAILFIVMQRFYQESMSGSVKG
>NC_014246.1|WP_013188690.1|316591_317995_-|sugar-ABC-transporter-permease
MDATQTSNREARLRKKLGKDYVSPSPYSLKVAFREGDAITKASAVIFGLGNLTHRQIVKGVIFLLLEIAFFAFLFTNGLGFLAKLPGLGDQEQGKVLVNGYWEYSAGDNSVIILLYGVATILIILAFIGVWNLSVRSAYKAQVLTAKSGRAPSIREDIADLLDNRSHVGFLFLPTLGILTFSVLPLIFMISMAFTSYDHKHLVLFDWVGLKNFGAIFANSSGDVNLRIFSSVLIWTLIWAIFATFLNFFLGMFMAMLINRKTTRFKNFWRACFSMSIAVPQFVSLLVINLMLQPQGAINRLLMDWGWIDQALPFFTDATWARVTVIVVNLWVGIPFTIMQITGILQNIPADQYEAARIDGANSWVIFRKITMPYIIFVLTPYLITTFTGNVNNFNVIYLLSRGAPVPVGDSAGKTDLLITWLYKLTVDKNDYNLGAVIGIMTFIVLAVVSLITYRRSGSFKNEEAFR

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Crispr_ID: NC_014246_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014246_2

1589742-1589829

Orphan

Consensus_repeat	Method
GTTTATCATCGGCAAATCCAGGCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014246_2

>merge|NC_014246|2|1589742-1589829|CRISPRCasFinder
GTTTATCATCGGCAAATCCAGGCTCGACCATGCAGCAGCAGGGGCAAACCTGACCGACAAAGGGTTCATCATCGGCAAATCCAGGCTC

>NC_014246|2|2|1589742-1589829|CRISPRCasFinder
GTTTATCATCGGCAAATCCAGGCTC	GACCATGCAGCAGCAGGGGCAAACCTGACCGACAAAGG
GTTCATCATCGGCAAATCCAGGCTC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014246.1\|WP_013189358.1\|1584481_1584844_+\|hypothetical-protein	unknown	unknown	unknown
NC_014246.1\|WP_013189355.1\|1581500_1582598_+\|phage-portal-protein	unknown	unknown	gnl\|CDD\|377413
NC_014246.1\|WP_013189359.1\|1584845_1585343_+\|hypothetical-protein	unknown	unknown	unknown
NC_014246.1\|WP_112668464.1\|1582587_1584153_+\|HK97-family-phage-prohead-protease	unknown	unknown	gnl\|CDD\|309640
NC_014246.1\|WP_013189366.1\|1591050_1591548_+\|hypothetical-protein	unknown	unknown	unknown
NC_014246.1\|WP_013189369.1\|1592634_1592916_+\|hypothetical-protein	unknown	unknown	unknown
NC_014246.1\|WP_013189373.1\|1596385_1596610_-\|hypothetical-protein	unknown	unknown	unknown
NC_014246.1\|WP_174259469.1\|1579461_1579818_+\|hypothetical-protein	unknown	unknown	unknown
NC_014246.1\|WP_013189361.1\|1585731_1586040_+\|hypothetical-protein	unknown	unknown	unknown
NC_014246.1\|WP_013189360.1\|1585342_1585735_+\|HK97-gp10-family-phage-protein	unknown	unknown	gnl\|CDD\|273775
NC_014246.1\|WP_013189357.1\|1584155_1584485_+\|hypothetical-protein	unknown	unknown	unknown
NC_014246.1\|WP_013189364.1\|1590388_1590610_+\|hypothetical-protein	unknown	unknown	unknown
NC_014246.1\|WP_013189370.1\|1593427_1594222_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|234698
NC_014246.1\|WP_013189365.1\|1590590_1591049_+\|hypothetical-protein	unknown	unknown	unknown
NC_014246.1\|WP_013189354.1\|1579810_1581223_+\|phage-terminase-large-subunit-family-protein	unknown	unknown	gnl\|CDD\|226974
NC_014246.1\|WP_013189367.1\|1591559_1592396_+\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|377495
NC_014246.1\|WP_013189372.1\|1595822_1596389_-\|hypothetical-protein	unknown	unknown	unknown
NC_014246.1\|WP_013189362.1\|1586180_1588532_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227699
NC_014246.1\|WP_004007079.1\|1592908_1593124_-\|hypothetical-protein	unknown	unknown	unknown
NC_014246.1\|WP_013189371.1\|1594460_1595690_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|349914

Protein	Function_ID	Function_description	E-value
NC_014246.1\|WP_013189355.1\|1581500_1582598_+\|phage-portal-protein	gnl\|CDD\|377413	pfam04860, Phage_portal, Phage portal protein. Bacteriophage portal proteins form a dodecamer and is located at a five-fold vertex of the viral capsid. The portal complex forms a channel through which the viral DNA is packaged into the capsid, and exits during infection. The portal protein is though to rotate during DNA packaging. Portal proteins from different phage show little sequence homology, so this family does not represent all portal proteins.	1.29411e-65
NC_014246.1\|WP_013189370.1\|1593427_1594222_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|234698	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed.	2.46782e-21
NC_014246.1\|WP_013189354.1\|1579810_1581223_+\|phage-terminase-large-subunit-family-protein	gnl\|CDD\|226974	COG4626, COG4626, Phage terminase-like protein, large subunit [General function prediction only].	6.62544e-16
NC_014246.1\|WP_112668464.1\|1582587_1584153_+\|HK97-family-phage-prohead-protease	gnl\|CDD\|309640	pfam04586, Peptidase_S78, Caudovirus prohead serine protease. Family of Caudovirus prohead serine proteases also found in a number of bacteria possibly as the result of horizontal transfer.	1.22512e-14
NC_014246.1\|WP_013189362.1\|1586180_1588532_+\|hypothetical-protein	gnl\|CDD\|227699	COG5412, COG5412, Phage-related protein [Function unknown].	5.71429e-23
NC_014246.1\|WP_013189367.1\|1591559_1592396_+\|CHAP-domain-containing-protein	gnl\|CDD\|377495	pfam05257, CHAP, CHAP domain. This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Escherichia coli gss, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine.	6.32565e-08
NC_014246.1\|WP_013189371.1\|1594460_1595690_-\|amidohydrolase	gnl\|CDD\|349914	cd05664, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, Uncharacterized subfamily of proteins predicted as putative amidohydrolases or hippurate hydrolases. These are a class of zinc binding homodimeric enzymes involved in the hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as in the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	0
NC_014246.1\|WP_013189360.1\|1585342_1585735_+\|HK97-gp10-family-phage-protein	gnl\|CDD\|273775	TIGR01725, hypothetical_protein, phage protein, HK97 gp10 family. This model represents an uncharacterized, highly divergent bacteriophage family. The family includes gp10 from HK022 and HK97. It appears related to TIGR01635, a phage morphogenesis family believed to be involved in tail completion. [Mobile and extrachromosomal element functions, Prophage functions].	7.3332e-07

>NC_014246.1|WP_013189362.1|1586180_1588532_+|hypothetical-protein
MASRPTITIEILASARKAKQELDSLHGKMKGAFSKIGGVAKGTAIAMAGAGAGVVAFGVKAVKSASDLQQSVGAIDAVFKGNASQMHAWANTAAKDVGLTKNEFNELGTLIGSQLKNGGTAMDQLAPKTNKLITLGADLSSMYGGTTREAVEALSSALKGERDPIERYGVTLKQAQIDAEAASLGFEKVGGSLSAEANQAATLSLIMKQTADAHGNFARESDTLAHQQQVLGAQFENIKAKIGMALLPAVSKILQLVAEKGMPVIEKMTDTLANNLEPVAMQLANWIVTVMLPAIQMILPLLGAILAAIAPIISQIVQMLMPAITQLTAMITTHPALFGALATAIVGVAGGFKLFAAGLNIAKIAANGLKIVQLALNAAFAANPIGLVITIIAALVAAIMVAWNTNEGFRNAVIGAWNAIKTACETIWNGIVAFFQAVWEGIKTIFVTYLNFVFNFYKTIFNGIKAFGEMIWNGIVAFFQAVWEGIKAIFVTYLNFVLNFWKTVWNTVKTVFTTIWNAIKAFATAIWNAIKTIFTTWLNAIKAFWEKTWNAIKVFFVKIFTTMQSIVTKVLTTIRNIFVNTFKAITNTIKKAFEIIVNTIKTAFKVMVDAVKKGVNQVVNFVKGIGGRIKSAIGNLGDILLGPGKAIMDGFLRGIKNGFNTVKDFVSGIGEWIAAHKGPIDYDRVLLEPAGKAIMDGLMNGMDSKRGKLRDQLKELTNDIANNTFQAPDFELGALTNADNRSKHHPEIHIHVNALTPTMEVGRVVAQALESYLQANGRGLVYA
>NC_014246.1|WP_013189361.1|1585731_1586040_+|hypothetical-protein
MISTDNLTLGEIAAIEKYSGKRLGEFSEESSLDVRTLTAFGYVISKRLGLQAELSDIEQLSVDEINQLLEQDLPSWTTRSEKTEKIAQYLESHPVDTDAAGE
>NC_014246.1|WP_013189360.1|1585342_1585735_+|HK97-gp10-family-phage-protein
MAKSTITESGVKIEGLSKAMTRMKKTVGSLEALKGPLQKIADIGARNLRQVTPVSTGALKGTIKTANTERKARVKIGRRRPLHYAPFVEYGTRRQKGQRFIRKAKLATEWPASKIYETEIKKVLRKELGS
>NC_014246.1|WP_013189359.1|1584845_1585343_+|hypothetical-protein
MTYKSSPRIKGNQLLLTIDGKDYWADCSECFIETGKADKDTVTFADAANGSGDVSYTLKFKAVQSTDPASFWSYIWDHAGETVPFVYAPHGNATPAADKPHFTGKVTIASKPKIGGAAGATTYDFEGEWQIDGTPEKVTSGSKVAGAGWDTGTSASSSGSAETGK
>NC_014246.1|WP_013189358.1|1584481_1584844_+|hypothetical-protein
MIAQARADLTEVLESQGLKVYSYVPERVEAPCVIIDTAPRIDSAEVFGEYSISFKVTAVVAPAGDFGIQVENLDRLLDTVLEALENLDVTAQGHYVLQAPDGQQMLAYELNVESEYRKEN
>NC_014246.1|WP_013189357.1|1584155_1584485_+|hypothetical-protein
MNLKVEPAELSEYLGGTSSSSQTLEACISEAESLVGVLLQDSRESTPPPEAIVKRAVLDTAADLYARKSAPNGVKAFADLDGTSPIRLRLDPLAQARATLAPFLKMVVA
>NC_014246.1|WP_112668464.1|1582587_1584153_+|HK97-family-phage-prohead-protease
MSNDLEYRSISVGATDVEAREVSGIGVPFADETQIFEGYFEQFARGAVEVPKAGCKLLAEHAKPIGTLTGRDTERGWEIIGKVAKTQAGDEALELARAGVYTGLSVGFEMLEYADENREDGIHRTVTKALVREVSLTPFPAYENASVQKIRQKGKEMPELTEETPAKPVETESLRELRSTVEDLTRAVEVLKTSKPWEKPAEAAPDTRSAAEFIKSVLSGNEDDQTALRSIQERAYTGGTSADTVLTPQWVGDLTRLVDQGAGIRTLFTTGNLPAEGFTLEYAQLKSDTMKVAKQAKEGDNLVMGNVSVETKTTDISTFGGATTLSRQEIERGHVRILDHHLRAMAIAAGKTARNEFHTAYEGVVTGAPQKLTGKTLASMSWGDWVDQVVDAASIFEEQGLTIDNLIVDKTVFKALAKLEGKDGRPMMSEHEGGQNTIGTLTAAGLKGALLNIPVVLDTDAAKASAVFQNRLAIRSYMSSLVRLQDENILNLSKDFSVYFYAAFAAEMPGCLVPITGLAGA
>NC_014246.1|WP_013189355.1|1581500_1582598_+|phage-portal-protein
MRWFPFKRENVITNPAVLPPARKAFLTVSPRQAMGLETVYRALSILETAAKQLTIDAWRGANLLTPPPSLVRRPNIGSTQSRFIVETVASLAQRGNAYWLITRDQAGQVLTLDVLPPLEVTPKQDPQTKIIDFTYSGRIYSSREICHLKLLTVAGQVEGLGPIQAARQSLAGALDLAEYSSSLVKGGGIPTGILTSEQQITQAQAKETRDEWNATQGIGKGIAVLGKGTKFQVLSLKPEEIQFLETQNFNVTQIARLFGIPARLMLAPLDGASTTYANAQQEDLQMVKWTLMAYLREIEVAITDVLPRGITARFNLDALLRTDTLSRYQAHQIGINAGFLTIDEVRAIEGLPPLQSQESENENEQ
>NC_014246.1|WP_013189354.1|1579810_1581223_+|phage-terminase-large-subunit-family-protein
MPKYATARNPANPTIGAQVELVARFLNTPLMPWQKLVADVAGERQAEHPERARYQTVVVTVPRQSGKTTLIKALMAAVAQANPGCQVYYTAQTRKDAVEKWGELAKQLRKDMGIAPDGKPRVKVLEGTGNERIVFRGTESMIMPFAPTVEGIHGKTSPLVVVDEAWAFDQARGDDLMAAFNPVGLTIPHSQVWIISTAGDTRSEWLRSLVDKGRQAINDPGTTTAFFEWSADEEMAAANLRSDEALAFHPAIGFTQELWKIQSLAQTEPDHLYRRSYLNLWPTAAETSIVDLEAWEKLAEPEPASMPPDVAIGFDVATARTGATIYAAWQDGETVQIHRLVSKAGAAWVEKAIAHLQETLAPMAVVADDSGDNRPIIEALRRNGKEIYALRPREYASANSEFFARISDNRLHHDGNSEIVDAFANSVMKPISGGQAISPRHCAGPVDAARAAIAAAYAALNFDSRPQIFF
>NC_014246.1|WP_174259469.1|1579461_1579818_+|hypothetical-protein
MSEKQENECWQPELPGLGDPFMASNAMVKAVKARIEALNLTSEQELGMAAEIQLLYSLAHELDVAFAARKKTIAHVTMIGQFKELLACLPEVSSSDVADPYEVFLEQLNAESGQNVDA
>NC_014246.1|WP_013189364.1|1590388_1590610_+|hypothetical-protein
MSKPIQFNRGDILTAEQINKYLLNQEDNESDLAFIEALNVDLMEEDFNKLKKELDYLNILQDGIEVEYGCEDI
>NC_014246.1|WP_013189365.1|1590590_1591049_+|hypothetical-protein
MDAKIFEQGQILTADDVNKYLVNDDIDTEKMRGDLTALKTRIQELIQEKQTELSENVPNAIVFHLPKNAYPFHMVRNKMEASGKTWNGLTNFTASITFPENMRIKDVIPIDTVLNGVTYKRNTISFKITVGYPRSNTNFDFSQELLVILERN
>NC_014246.1|WP_013189366.1|1591050_1591548_+|hypothetical-protein
MVHFFDGQILTAEDINQYLVNKTNSNAFNVASSRLTGLKEKVSNLHTSNLTVDNLTIPIILTPVPLGADEIGKFPELKCPYGSDCLYMGCEVPYKEFDKIVVPKGSYYTDSIDKACYQILDKPVTQYLFKDDACLVVNENKTFSVGLRVKNQNIPFKITVLNAVQ
>NC_014246.1|WP_013189367.1|1591559_1592396_+|CHAP-domain-containing-protein
MVTANTILNTATAEIGYSRWDDPKPGTKYGRAYAVKHGAGFGKNGVPFCALFITWVFHQAGINPPGGDFAYCPAGINAMKKLGLEVPKHEAKPGDIVFFDWDGGVSDHVGIVETNLGTTLQTIEGNTTIKGRTGCVGKRKRHLSTVCSVFRPQYGHTTTGNNPLPSASAAIEVDGYFGTQSIRRLQTVIGTPVDGLISSQPLANRQYVPNAAGGWEWVTRGAKGSTCIKAWQKRIGAAADGYFGRETVMKTQQFLGVPTDGYAGKQTMTAWQTWLNHR
>NC_014246.1|WP_013189369.1|1592634_1592916_+|hypothetical-protein
MPTWLTDLQGIGAILSGIAAIIAAIYAKSAAKEMKPNHGSSMRDAINMLDDRIKSLGHRQGELHDDLQNLTADARENHTRLWKELEKIQRGLI
>NC_014246.1|WP_004007079.1|1592908_1593124_-|hypothetical-protein
MFLSLQGVAEYAGLAYGTIKAYFARGYLPEPDVAIGMRDKVTAYGWSTDTIDHWLANRPGRGARTDLKRAK
>NC_014246.1|WP_013189370.1|1593427_1594222_-|tyrosine-type-recombinase/integrase
MKSKTWENCASAYLQHLKAAGRAKGTIRIHRYYLQVMRGIAPCPGLVSRERLEAWLAEHDWKPETRRSAQGVAHQFFKFLVEDGILKDSPAEFLKPVHVPDGVPHPAPESAVRHALQNAPKRTALMVRFAALCGLRACEICTLRGNAWDGELLRVKGKGGRVRVIPLQDSTLIYSLESCPGWLFPGRIDGHLSAQYTAKLLGSALPPGVTGHSLRHRFGTVAYRATHDLLAVGAVMGHVKTDTTKRYIKLDLDPLARAVQAAQL
>NC_014246.1|WP_013189371.1|1594460_1595690_-|amidohydrolase
MSNLDIHAAVTELGSWQDETYQWLHQHPELSMSETETCNFIEKQLQDFGYQTEIIGGGVVGILRNGTGKTTLFRADMDGLPVREETGLPYASTITRRDRDGNEVPVMHACGHDVHITAGLGAARVLAAHRDSWSGTHIALFQPGEETAEGAKSMVAAGLVDKIPRPDVAFGQHVLTGPMPTGAVGTHVGAILSTGASLKITLHGKGSHGSMPHMGIDPVVLASTIVMRLQTIVSREIDPFQMAVVTVGSVQAGTKSNIIPERATLLVNIRAYDVAVREHLLTAIKRIVNAECVAAGSPKPAEFELYDSYPLTANDPQVTKKVTEAFLAHFGAERVGDCGEVPASEDFSTIPDAFGIPYCYWGLGGFRDDDPKFPNHNPKFAPVMQPTLATGIEAVLAAVMAWLGKSEQE
>NC_014246.1|WP_013189372.1|1595822_1596389_-|hypothetical-protein
MIIMTHLEEYYQNKPYPFFIVHMIAIVGFVALLITSLIMLVAHNSGTAVIVIHKLSSWLLMIGLVISGVEALVVKLFAPSAKRKPFGYRIPVLKEITTRQEVAIYTTYCVLSWALLPIVFIFAFLSGMGAVGISSPVLPFHTMDPGLLAHFHHISGALFVIMIILHVALSVPARRAREKANQAISSNN
>NC_014246.1|WP_013189373.1|1596385_1596610_-|hypothetical-protein
MSEDVQKEDLQKQIDERRTNFCMNLCPGCKAARAKQKGFWYHTVKVCDDKLCPWCAAYYRTQGKRAYEPLDPIE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_014246_1	1.46\|306675\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	306675-306707	33	NC_014246.1	1578666-1578698	0	1.0

1. spacer 1.46|306675|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to position: 1578666-1578698, mismatch: 0, identity: 1.0

ccgccggcgccgaaggcgcggcgcgccaaatta	CRISPR spacer
ccgccggcgccgaaggcgcggcgcgccaaatta	Protospacer
*********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_014246_1	1.39\|306248\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	306248-306280	33	MK005300	Salmonella phage STG2, complete genome	61376-61408	6	0.818
NC_014246_1	1.4\|304111\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	304111-304143	33	NZ_LN890657	Candidatus Promineofilum breve strain Cfx-K plasmid III, complete sequence	23005-23037	8	0.758
NC_014246_1	1.12\|304600\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	304600-304632	33	NZ_CP011515	Mitsuaria sp. 7 plasmid, complete sequence	131118-131150	8	0.758
NC_014246_1	1.27\|305516\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	305516-305548	33	NZ_CP011123	Acetobacter oryzifermentans strain SLV-7 plasmid unnamed3, complete sequence	2188-2220	8	0.758
NC_014246_1	1.27\|305516\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	305516-305548	33	NZ_CP021469	Komagataeibacter europaeus strain SRCM101446 plasmid pKE1446-2, complete sequence	3164-3196	8	0.758
NC_014246_1	1.27\|305516\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	305516-305548	33	NC_006674	Gluconobacter oxydans 621H plasmid pGOX3, complete sequence	13972-14004	8	0.758
NC_014246_1	1.27\|305516\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	305516-305548	33	NC_021992	Acetobacter pasteurianus 386B plasmid Apa386Bp3, complete sequence	15469-15501	8	0.758
NC_014246_1	1.27\|305516\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	305516-305548	33	NZ_CP023660	Acetobacter pomorum strain BDGP5 plasmid pApBDGP5C, complete sequence	886-918	8	0.758
NC_014246_1	1.27\|305516\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	305516-305548	33	NZ_CP030873	Acetobacter sp. JWB plasmid unnamed2, complete sequence	1070-1102	8	0.758
NC_014246_1	1.27\|305516\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	305516-305548	33	NC_019327	Acetobacter pasteurianus plasmid pAC258-26, complete sequence	17585-17617	8	0.758
NC_014246_1	1.45\|306614\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	306614-306646	33	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2417728-2417760	8	0.758
NC_014246_1	1.46\|306675\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	306675-306707	33	NZ_CP026927	Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609a, complete sequence	51956-51988	8	0.758
NC_014246_1	1.12\|304600\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	304600-304632	33	NC_016978	Comamonas testosteroni plasmid pI2, complete sequence	39119-39151	9	0.727
NC_014246_1	1.12\|304600\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	304600-304632	33	NZ_CP053984	Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence	52037-52069	9	0.727
NC_014246_1	1.12\|304600\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	304600-304632	33	NC_010935	Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence	39814-39846	9	0.727
NC_014246_1	1.13\|304661\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	304661-304693	33	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	259472-259504	9	0.727
NC_014246_1	1.27\|305516\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	305516-305548	33	NZ_CP015171	Acetobacter ascendens strain LMG 1591 plasmid unnamed3, complete sequence	15453-15485	9	0.727
NC_014246_1	1.27\|305516\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	305516-305548	33	NC_016028	Komagataeibacter medellinensis NBRC 3288 plasmid pGXY030, complete sequence	20211-20243	9	0.727
NC_014246_1	1.46\|306675\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	306675-306707	33	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	827792-827824	9	0.727
NC_014246_1	1.25\|305394\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	305394-305426	33	MN693054	Marine virus AFVG_25M223, complete genome	29225-29257	10	0.697
NC_014246_1	1.36\|306065\|33\|NC_014246\|CRISPRCasFinder,CRT	306065-306097	33	MK448747	Streptococcus phage Javan385, complete genome	29869-29901	10	0.697
NC_014246_1	1.36\|306065\|33\|NC_014246\|CRISPRCasFinder,CRT	306065-306097	33	MK448926	Streptococcus phage Javan392, complete genome	30699-30731	10	0.697
NC_014246_1	1.41\|306370\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	306370-306402	33	NZ_CP024936	Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence	377000-377032	10	0.697
NC_014246_1	1.46\|306675\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	306675-306707	33	NZ_CP011665	Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence	453571-453603	10	0.697
NC_014246_1	1.46\|306675\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	306675-306707	33	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	451211-451243	10	0.697
NC_014246_1	1.46\|306675\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	306675-306707	33	NZ_CP048642	Streptomyces aureoverticillatus strain HN6 plasmid unnamed, complete sequence	45856-45888	10	0.697
NC_014246_1	1.46\|306675\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	306675-306707	33	NZ_CP049247	Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed1, complete sequence	23958-23990	10	0.697
NC_014246_1	1.46\|306675\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	306675-306707	33	NZ_CP034817	Paracoccus sp. Arc7-R13 plasmid unnamed7, complete sequence	6976-7008	11	0.667
NC_014246_1	1.46\|306675\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	306675-306707	33	NZ_CP036456	Streptomonospora sp. M2 plasmid phiM2, complete sequence	5751-5783	15	0.545
NC_014246_1	1.46\|306675\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	306675-306707	33	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	1287043-1287075	16	0.515

1. spacer 1.39|306248|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to MK005300 (Salmonella phage STG2, complete genome) position: , mismatch: 6, identity: 0.818

catag-ccatagccgtgaaaacgttcgcgggctg	CRISPR spacer
-gtagaatatagccgtgacaacgttcgcgcgctg	Protospacer
 .***  .********** ********** ****

2. spacer 1.4|304111|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN890657 (Candidatus Promineofilum breve strain Cfx-K plasmid III, complete sequence) position: , mismatch: 8, identity: 0.758

acacccacgctttccagttcgtcgagaaccgca	CRISPR spacer
agacggccgctttccggttcgtcgagaaacggc	Protospacer
* **   ********.************ **

3. spacer 1.12|304600|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011515 (Mitsuaria sp. 7 plasmid, complete sequence) position: , mismatch: 8, identity: 0.758

cctggcgatgtcgaacgcgacctgggcttcggg	CRISPR spacer
cccggcgatgtcgaacgcgagctgcgtgcctgc	Protospacer
**.***************** *** *. .* *

4. spacer 1.27|305516|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011123 (Acetobacter oryzifermentans strain SLV-7 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.758

aagaacatggcgcattatctgcacgtgtccagg	CRISPR spacer
cagaacctggcgcattatctggacgaagccgtg	Protospacer
 ***** ************** *** . **. *

5. spacer 1.27|305516|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021469 (Komagataeibacter europaeus strain SRCM101446 plasmid pKE1446-2, complete sequence) position: , mismatch: 8, identity: 0.758

aagaacatggcgcattatctgcacgtgtccagg	CRISPR spacer
cagaacctggcgcattatctggacgaagccgtg	Protospacer
 ***** ************** *** . **. *

6. spacer 1.27|305516|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NC_006674 (Gluconobacter oxydans 621H plasmid pGOX3, complete sequence) position: , mismatch: 8, identity: 0.758

aagaacatggcgcattatctgcacgtgtccagg	CRISPR spacer
cagaacctggcgcattatctggacgaagccgtg	Protospacer
 ***** ************** *** . **. *

7. spacer 1.27|305516|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NC_021992 (Acetobacter pasteurianus 386B plasmid Apa386Bp3, complete sequence) position: , mismatch: 8, identity: 0.758

aagaacatggcgcattatctgcacgtgtccagg	CRISPR spacer
cagaacctggcgcattatctggacgaagccgtg	Protospacer
 ***** ************** *** . **. *

8. spacer 1.27|305516|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023660 (Acetobacter pomorum strain BDGP5 plasmid pApBDGP5C, complete sequence) position: , mismatch: 8, identity: 0.758

aagaacatggcgcattatctgcacgtgtccagg	CRISPR spacer
cagaacctggcgcattatctggacgaagccgtg	Protospacer
 ***** ************** *** . **. *

9. spacer 1.27|305516|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030873 (Acetobacter sp. JWB plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

aagaacatggcgcattatctgcacgtgtccagg	CRISPR spacer
cagaacctggcgcattatctggacgaagccgtg	Protospacer
 ***** ************** *** . **. *

10. spacer 1.27|305516|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NC_019327 (Acetobacter pasteurianus plasmid pAC258-26, complete sequence) position: , mismatch: 8, identity: 0.758

aagaacatggcgcattatctgcacgtgtccagg	CRISPR spacer
cagaacctggcgcattatctggacgaagccgtg	Protospacer
 ***** ************** *** . **. *

11. spacer 1.45|306614|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

acatcgccggcgccacatttcaccaaagcgtgc	CRISPR spacer
gggtggccggcgccgcatttcaccgaagcggac	Protospacer
. .* *********.*********.***** .*

12. spacer 1.46|306675|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026927 (Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609a, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccggcgccgaaggcgcggcgcgccaaatta	CRISPR spacer
tcgccggcgtcgaaggcgcgccgcgcggctttg	Protospacer
.********.********** ***** .  **.

13. spacer 1.12|304600|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NC_016978 (Comamonas testosteroni plasmid pI2, complete sequence) position: , mismatch: 9, identity: 0.727

cctggcgatgtcgaacgcgacctgggcttcggg	CRISPR spacer
ggagatgttgtcgaacgcggcctgggcctcggc	Protospacer
   *..* ***********.*******.****

14. spacer 1.12|304600|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053984 (Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

cctggcgatgtcgaacgcgacctgggcttcggg	CRISPR spacer
ggagatgttgtcgaacgcggcctgggcctcggc	Protospacer
   *..* ***********.*******.****

15. spacer 1.12|304600|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NC_010935 (Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence) position: , mismatch: 9, identity: 0.727

cctggcgatgtcgaacgcgacctgggcttcggg	CRISPR spacer
ggagatgttgtcgaacgcggcctgggcctcggc	Protospacer
   *..* ***********.*******.****

16. spacer 1.13|304661|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

tccagctgcagctggttaccgccggcggcgata	CRISPR spacer
tccagctgcagctgggtgccgccggtcagggcg	Protospacer
*************** *.*******. . *...

17. spacer 1.27|305516|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015171 (Acetobacter ascendens strain LMG 1591 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.727

aagaacatggcgcattatctgcacgtgtccagg	CRISPR spacer
cagaacctggcgcattatctggacgaagcagtg	Protospacer
 ***** ************** *** . * . *

18. spacer 1.27|305516|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NC_016028 (Komagataeibacter medellinensis NBRC 3288 plasmid pGXY030, complete sequence) position: , mismatch: 9, identity: 0.727

aagaacatggcgcattatctgcacgtgtccagg	CRISPR spacer
cagaacctggcgcattatctggacgaagcagtg	Protospacer
 ***** ************** *** . * . *

19. spacer 1.46|306675|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 9, identity: 0.727

ccgccggcgccgaaggcgcggcgcgccaaatta	CRISPR spacer
ttcccgccgccgaaggcgctgcgcgccatgtcg	Protospacer
.. *** ************ ******** .*..

20. spacer 1.25|305394|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to MN693054 (Marine virus AFVG_25M223, complete genome) position: , mismatch: 10, identity: 0.697

acccggttggcaattcttcaccaaacggagacg	CRISPR spacer
tattagttgtcaattcttcacaaaacggatttg	Protospacer
  ...**** *********** *******  .*

21. spacer 1.36|306065|33|NC_014246|CRISPRCasFinder,CRT matches to MK448747 (Streptococcus phage Javan385, complete genome) position: , mismatch: 10, identity: 0.697

agaaggaatgaaaacattatccggcgctgagcg	CRISPR spacer
ggatggaatgaaaacattagccggcaacggtat	Protospacer
.** *************** *****. .*.

22. spacer 1.36|306065|33|NC_014246|CRISPRCasFinder,CRT matches to MK448926 (Streptococcus phage Javan392, complete genome) position: , mismatch: 10, identity: 0.697

agaaggaatgaaaacattatccggcgctgagcg	CRISPR spacer
ggatggaatgaaaacattagccggcaacggtat	Protospacer
.** *************** *****. .*.

23. spacer 1.41|306370|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024936 (Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence) position: , mismatch: 10, identity: 0.697

gggataagtacatcggcggtggcatgacgcaga	CRISPR spacer
ttggcaagtacatcggcggcggcatgtcgttcg	Protospacer
  *..**************.****** **.  .

24. spacer 1.46|306675|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011665 (Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence) position: , mismatch: 10, identity: 0.697

ccgccggcgccgaaggcgcggcgcgccaaatta	CRISPR spacer
ccgctggcgccgaaggcgccgcgcccacccccc	Protospacer
****.************** **** *    ..

25. spacer 1.46|306675|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 10, identity: 0.697

ccgccggcgccgaaggcgcggcgcgccaaatta	CRISPR spacer
gagccggcaccgaaggcgcggctcgctgccctt	Protospacer
  ******.************* ***..  .*

26. spacer 1.46|306675|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048642 (Streptomyces aureoverticillatus strain HN6 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ccgccggcgccgaaggcgcggcgcgccaaatta	CRISPR spacer
acttcggcgccgaaggtgcggcgcaccaggagc	Protospacer
 * .************.*******.***..

27. spacer 1.46|306675|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049247 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

ccgccggcgccgaaggcgcggcgcgccaaatta	CRISPR spacer
gaacgggcgctgaaggcgctgcgcgccaacaag	Protospacer
  .* *****.******** *********   .

28. spacer 1.46|306675|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034817 (Paracoccus sp. Arc7-R13 plasmid unnamed7, complete sequence) position: , mismatch: 11, identity: 0.667

ccgccggcgccgaaggcgcggcgcgccaaatta	CRISPR spacer
tggccgccgccgaacgcgcggcgcgcgcggggc	Protospacer
. **** ******* ***********  ..

29. spacer 1.46|306675|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP036456 (Streptomonospora sp. M2 plasmid phiM2, complete sequence) position: , mismatch: 15, identity: 0.545

---ccgccggcgccgaaggcgcggcgcgccaaatta	CRISPR spacer
ccaccaccggcgccgggcctgcggcgccggcgg---	Protospacer
   **.*********..  .*******    ..

30. spacer 1.46|306675|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 16, identity: 0.515

-ccgccggcgccgaaggcgcggcgcgccaaatta	CRISPR spacer
ctcgttggcgcggcgcgcctgcggcgcctgaac-	Protospacer
 .**..***** * . ** .*  ***** .* .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1390166 : 1462181

Erysipelothrix_phage(42.86%)

holin,tRNA,capsid,tail,head,portal,protease,terminase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_154645707.1\|1390166_1391705_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_013189195.1\|1391817_1393443_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	5.5e-06	44.1
WP_004007250.1\|1393505_1395191_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_013189196.1\|1395612_1396341_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_013189197.1\|1396485_1397886_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
WP_004009136.1\|1397912_1398551_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_013189198.1\|1398636_1399956_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_013189199.1\|1399952_1400783_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_013189200.1\|1400808_1401327_+	DUF732 domain-containing protein	NA	NA	NA	NA
WP_004009140.1\|1401369_1402497_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_013189201.1\|1402581_1403490_+	glutathione synthetase	NA	NA	NA	NA
WP_013189202.1\|1403516_1405055_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_013189203.1\|1405111_1406431_-	anaerobic glycerol-3-phosphate dehydrogenase subunit C	NA	NA	NA	NA
WP_013189204.1\|1406427_1407732_-	glycerol-3-phosphate dehydrogenase subunit GlpB	NA	NA	NA	NA
WP_013189205.1\|1407728_1409474_-	anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA	NA	NA	NA
WP_146741549.1\|1410665_1411193_+	hypothetical protein	NA	NA	NA	NA
WP_076388631.1\|1411186_1411474_+	hypothetical protein	NA	NA	NA	NA
WP_013189208.1\|1411537_1412068_+	hypothetical protein	NA	NA	NA	NA
WP_013189209.1\|1412235_1413798_-	recombinase family protein	Q6DMS5	Streptococcus_phage	7.1e-128	46.4
WP_013189210.1\|1413797_1415048_-	recombinase family protein	M1NSJ1	Streptococcus_phage	3.0e-60	38.2
WP_013189211.1\|1415078_1415315_-	hypothetical protein	NA	NA	NA	NA
WP_154645706.1\|1415275_1415683_-	sigma-70 region 4 domain-containing protein	NA	NA	NA	NA
WP_013189212.1\|1415814_1416630_-	N-acetylmuramoyl-L-alanine amidase	A0A1D8ETE4	Propionibacterium_phage	3.1e-58	62.5
WP_004009151.1\|1416806_1417388_+	DUF4274 domain-containing protein	NA	NA	NA	NA
WP_004009153.1\|1417538_1417982_+	hypothetical protein	NA	NA	NA	NA
WP_013189213.1\|1418178_1418457_+	hypothetical protein	NA	NA	NA	NA
WP_004009155.1\|1418744_1419605_+	CbrC family protein	NA	NA	NA	NA
WP_004009156.1\|1419646_1420006_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001129922.1\|1420057_1420432_+	TnpV protein	D0R0F4	Streptococcus_phage	6.6e-64	96.8
WP_000691758.1\|1420798_1422718_+	tetracycline resistance ribosomal protection protein Tet(O)	A0A1B0RXH7	Streptococcus_phage	0.0e+00	98.9
WP_002779755.1\|1422769_1422943_+	cysteine-rich KTR domain-containing protein	D0R0F6	Streptococcus_phage	4.6e-28	100.0
WP_000241709.1\|1423430_1423943_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_013189215.1\|1424037_1424226_+	hypothetical protein	NA	NA	NA	NA
WP_013189216.1\|1424216_1424375_-	hypothetical protein	NA	NA	NA	NA
WP_013189219.1\|1425151_1426579_-	DUF4253 domain-containing protein	NA	NA	NA	NA
WP_013189221.1\|1427027_1427582_-\|holin	phage holin family protein	A0A2K5B2A2	Erysipelothrix_phage	1.5e-35	61.7
WP_169311389.1\|1427699_1427867_-	hypothetical protein	NA	NA	NA	NA
WP_013189222.1\|1427859_1428300_-	DUF1617 family protein	A0A2K9VCL5	Lactobacillus_phage	2.1e-08	31.9
WP_013189223.1\|1428312_1430976_-\|tail	phage tail protein	A0A1B1P770	Bacillus_phage	1.5e-72	39.1
WP_013189224.1\|1430991_1431678_-	hypothetical protein	A0A0A7RWN1	Clostridium_phage	5.7e-13	25.2
WP_013189225.1\|1431682_1434364_-	tape measure protein	A0A2K9V3J7	Faecalibacterium_phage	1.5e-40	41.5
WP_013189226.1\|1434416_1434725_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_004009166.1\|1434721_1435015_+	putative addiction module antidote protein	A4JWV1	Burkholderia_virus	1.5e-15	46.2
WP_013189227.1\|1435220_1435625_-	hypothetical protein	A0A2K5B295	Erysipelothrix_phage	5.7e-29	53.2
WP_013189228.1\|1435646_1436258_-\|tail	phage tail protein	A0A2K5B294	Erysipelothrix_phage	4.7e-75	73.8
WP_013189229.1\|1436318_1436831_+	VanZ family protein	NA	NA	NA	NA
WP_013189230.1\|1436827_1437172_-	hypothetical protein	A0A2K5B293	Erysipelothrix_phage	7.0e-20	40.0
WP_013189231.1\|1437168_1437606_-	HK97 gp10 family phage protein	A0A2K5B292	Erysipelothrix_phage	6.2e-29	46.9
WP_041797999.1\|1437605_1437938_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_013189233.1\|1437953_1438271_-\|head,tail	phage gp6-like head-tail connector protein	A0A2K5B290	Erysipelothrix_phage	3.2e-27	54.0
WP_013189234.1\|1438300_1439521_-\|capsid	phage major capsid protein	A0A2I4R671	Erysipelothrix_phage	1.0e-129	56.9
WP_013189235.1\|1439546_1440431_-\|protease	Clp protease ClpP	Q6DMU1	Streptococcus_phage	1.1e-56	60.9
WP_041798001.1\|1440427_1441729_-\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	1.7e-167	68.7
WP_041798002.1\|1441763_1442147_+	hypothetical protein	NA	NA	NA	NA
WP_013189238.1\|1442116_1443721_-\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	1.3e-241	76.2
WP_013189239.1\|1443796_1444090_-	hypothetical protein	NA	NA	NA	NA
WP_013189240.1\|1444268_1444604_-	hypothetical protein	NA	NA	NA	NA
WP_013189241.1\|1444710_1445160_-	hypothetical protein	NA	NA	NA	NA
WP_013189242.1\|1445153_1445369_-	hypothetical protein	NA	NA	NA	NA
WP_013189243.1\|1445451_1446978_-	DNA cytosine methyltransferase	A0A1P8DJM9	Virus_Rctr41k	2.7e-39	29.7
WP_013189244.1\|1446981_1448238_-	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	9.7e-136	56.6
WP_013189245.1\|1448209_1449400_-	methionine adenosyltransferase	A0A2K5B278	Erysipelothrix_phage	1.8e-107	56.5
WP_041798005.1\|1449500_1449719_+	hypothetical protein	NA	NA	NA	NA
WP_013189247.1\|1449741_1450314_-\|terminase	terminase	A0A2K5B277	Erysipelothrix_phage	8.3e-50	51.9
WP_041798006.1\|1450562_1450940_-	HNH endonuclease	Q38456	Bacillus_phage	7.9e-17	40.5
WP_013189250.1\|1451070_1451550_-	hypothetical protein	NA	NA	NA	NA
WP_013189251.1\|1451546_1452905_-	DEAD/DEAH box helicase	A0A1W6JQF1	Corynebacterium_phage	9.8e-158	61.6
WP_013189252.1\|1452885_1453167_-	VRR-NUC domain-containing protein	A0A2K5B272	Erysipelothrix_phage	4.5e-17	52.3
WP_013189253.1\|1453302_1455546_-	primase C-terminal domain-containing protein	A0A1B0RXC5	Streptococcus_phage	1.4e-198	48.3
WP_013189254.1\|1455538_1455985_-	hypothetical protein	A0A2K5B270	Erysipelothrix_phage	1.0e-31	48.9
WP_013189255.1\|1456173_1456728_+	hypothetical protein	NA	NA	NA	NA
WP_013189256.1\|1456785_1457988_+	ATP-binding protein	NA	NA	NA	NA
WP_041798008.1\|1457991_1459914_-	DNA polymerase	A0A1W6JQ98	Corynebacterium_phage	5.0e-208	57.1
WP_013189258.1\|1459990_1460554_-	DUF2815 family protein	A0A2K5B2A9	Erysipelothrix_phage	3.9e-68	71.3
WP_013189259.1\|1460550_1461048_-	HNH endonuclease	A0A2H4J6F5	uncultured_Caudovirales_phage	6.3e-22	44.4
WP_041798009.1\|1461044_1462181_-	DUF2800 domain-containing protein	A0A1W6JQ97	Corynebacterium_phage	7.5e-127	63.9

DBSCAN-SWA_2

1526618 : 1584153

Arthrobacter_phage(14.29%)

capsid,head,portal,protease,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013189313.1\|1526618_1527710_+\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_013189314.1\|1527706_1528231_+	hypothetical protein	NA	NA	NA	NA
WP_004007130.1\|1528583_1529315_+	hypothetical protein	NA	NA	NA	NA
WP_013189315.1\|1529347_1529914_-	M23 family metallopeptidase	NA	NA	NA	NA
WP_004007128.1\|1530281_1531127_+	30S ribosomal protein S2	NA	NA	NA	NA
WP_004007127.1\|1531205_1532075_+	elongation factor Ts	NA	NA	NA	NA
WP_004007126.1\|1532190_1532928_+	UMP kinase	NA	NA	NA	NA
WP_004007125.1\|1532989_1533547_+	ribosome recycling factor	NA	NA	NA	NA
WP_041798019.1\|1533594_1534626_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_013189317.1\|1534669_1535842_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA
WP_004007122.1\|1535880_1536465_+	DivIVA domain-containing protein	NA	NA	NA	NA
WP_013189318.1\|1536568_1537783_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_013189319.1\|1537808_1539017_+\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_013189320.1\|1539019_1540462_+	MATE family efflux transporter	NA	NA	NA	NA
WP_004009268.1\|1540537_1540846_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_004007117.1\|1540857_1541118_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_013189322.1\|1541220_1542762_+	GTPase ObgE	NA	NA	NA	NA
WP_041798158.1\|1542931_1543678_+	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA
WP_041798160.1\|1544850_1546077_+	ligand-binding protein SH3	NA	NA	NA	NA
WP_013189326.1\|1546073_1546535_+	ribosome silencing factor	NA	NA	NA	NA
WP_013189327.1\|1546583_1547219_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_169761320.1\|1547208_1547481_-	hypothetical protein	NA	NA	NA	NA
WP_169769047.1\|1547759_1547945_+	sodium:proton antiporter	NA	NA	NA	NA
WP_013189329.1\|1547941_1548586_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_004007107.1\|1548790_1549492_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_013189331.1\|1549585_1550809_+	MFS transporter	NA	NA	NA	NA
WP_013189333.1\|1552165_1552618_-\|capsid	phage major capsid protein	V5R986	Arthrobacter_phage	4.9e-37	63.7
WP_013189334.1\|1552642_1553137_-	hypothetical protein	NA	NA	NA	NA
WP_013189335.1\|1553320_1553584_-	hypothetical protein	NA	NA	NA	NA
WP_041798162.1\|1553585_1554233_-	hypothetical protein	NA	NA	NA	NA
WP_013189337.1\|1554302_1554953_+	DUF3800 domain-containing protein	NA	NA	NA	NA
WP_004007098.1\|1555181_1555370_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_013189338.1\|1555762_1560340_-	InlB B-repeat-containing protein	NA	NA	NA	NA
WP_013189339.1\|1560574_1562128_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	1.1e-30	31.1
WP_013189340.1\|1562170_1562854_-	response regulator transcription factor	W8CYM9	Bacillus_phage	9.0e-35	38.5
WP_004007094.1\|1562882_1563548_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_013189341.1\|1563634_1564438_-	phosphate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.1e-15	31.6
WP_013189342.1\|1564444_1565515_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_041798023.1\|1565511_1566585_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_004007090.1\|1566609_1567536_-	phosphate ABC transporter substrate-binding protein	A0A1D7SQC1	Cyanophage	4.1e-06	29.0
WP_004007089.1\|1567686_1568391_-	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_013189344.1\|1568401_1569814_-	TrkH family potassium uptake protein	NA	NA	NA	NA
WP_013189345.1\|1569889_1571020_+	peptide chain release factor 2	NA	NA	NA	NA
WP_004010926.1\|1571189_1571978_+	cell division ATP-binding protein FtsE	G9BWD6	Planktothrix_phage	2.2e-29	35.5
WP_004007085.1\|1571977_1572892_+	ABC transporter permease	NA	NA	NA	NA
WP_004007084.1\|1573002_1574319_+	M23 family metallopeptidase	A8ATH6	Listeria_phage	1.8e-15	47.0
WP_036324539.1\|1574402_1574942_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	3.8e-28	44.0
WP_013189346.1\|1575010_1575988_-	O-acetyl-ADP-ribose deacetylase	F1SVT2	Red_sea_bream_iridovirus	1.3e-23	45.8
WP_081458856.1\|1576517_1576817_-	helix-turn-helix transcriptional regulator	A0A142KBP9	Gordonia_phage	1.5e-05	41.3
WP_013189347.1\|1576918_1577176_+	hypothetical protein	NA	NA	NA	NA
WP_013189348.1\|1577182_1577617_-	hypothetical protein	NA	NA	NA	NA
WP_013189350.1\|1577863_1578202_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013189351.1\|1578198_1579059_+	hypothetical protein	NA	NA	NA	NA
WP_081458845.1\|1579055_1579358_+	HNH endonuclease	A0A0K0MWF1	Gordonia_phage	1.4e-08	36.4
WP_174259469.1\|1579461_1579818_+	hypothetical protein	NA	NA	NA	NA
WP_013189354.1\|1579810_1581223_+\|terminase	phage terminase large subunit family protein	A0A222ZH34	Arthrobacter_phage	6.5e-72	35.6
WP_013189355.1\|1581500_1582598_+\|portal	phage portal protein	A0A2R4A099	Microbacterium_phage	7.1e-74	44.2
WP_112668464.1\|1582587_1584153_+\|head,protease	HK97 family phage prohead protease	A0A2R3ZZG5	Microbacterium_phage	4.4e-93	38.6

DBSCAN-SWA_3

1718615 : 1728414

Bacillus_phage(28.57%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004006969.1\|1718615_1718906_-	WhiB family transcriptional regulator	A0A1B0XUI6	Freshwater_phage	6.1e-09	44.0
WP_004010782.1\|1719167_1720703_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.9e-101	42.7
WP_013189450.1\|1720746_1721469_+	DNA polymerase III subunit epsilon	Q1WDI5	Streptomyces_phage	8.9e-33	34.9
WP_041798033.1\|1721515_1722256_+	queuosine precursor transporter	A0A1W7AG82	Streptococcus_virus	4.2e-22	31.9
WP_013189452.1\|1722312_1723626_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	4.8e-53	30.9
WP_013189453.1\|1723706_1724825_+	GuaB3 family IMP dehydrogenase-related protein	NA	NA	NA	NA
WP_013189454.1\|1724821_1726540_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	6.6e-18	27.7
WP_041798035.1\|1726536_1728414_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.6e-25	24.6

Anti-CRISPR protein detection

Acr_ID: NC_014246.1|WP_036324539.1|1574402_1574942_+|SsrA-binding-protein-SmpB

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NC_014246.1|WP_036324539.1|1574402_1574942_+|SsrA-binding-protein-SmpB

1574402_1574942_+

179 aa aa

1526618-1584153

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NC_014246_1	Unclear	1.46\|306675\|33\|NC_014246\|CRISPRCasFinder,CRT,PILER-CR	306675-306707	33	1578698-1578666	0

1. spacer 1.46|306675|33|NC_014246|CRISPRCasFinder,CRT,PILER-CR matches to NC_014246 position: 1578698-1578666, mismatch: 0

ccgccggcgccgaaggcgcggcgcgccaaatta	CRISPR spacer
ccgccggcgccgaaggcgcggcgcgccaaatta	Protospacer
*********************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_014246

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information