CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	1 crisprs	csa3	11	10
NC_014306	Erwinia billingiae Eb661, complete genome	3 crisprs	DEDDh,DinG,cas3,csa3	0	7
NC_014305	Erwinia billingiae Eb661 plasmid pEB170, complete sequence	1 crisprs	NA	2	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_014304_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014304_1

85363-86036

Orphan

Consensus_repeat	Method
TGGGAATCNNCCCTACTTTTG	CRT

11 spacers

The CRISPR arrays of NC_014304_1

>merge|NC_014304|1|85363-86036|CRT
TGGGAATAAGCCCTACTTATGAGCCAGCAGGCGCGGTCGTGCGCAGAAAGATATCGAGTGGGAATCCCCCCTACTTTTGCAGGAGTGAGCGGCCGGCCAGTCAGCTGCGCGCCGTCATATGGGAATCAGCCCTACTTTTGAACCGGCGGGCACGGCCGGGCGCAGAATGATATCGAGTGGGAATCCCCCCTACTTTTGCAGGAGTGAGCGGCCACCCAGTCAGCTGCGCGCCTTCATATGGGAATCCCCCCTACTTTTTAACCCGTGGGCACGGCCGGGTGCAGAATGGCATTGTGTGGGAACCCCCCCTACTTTTGCAGAAGCGAGCGGCTGGCCAGTCAGCCGTGCGCCGTCATATGGGAATCAGCCCTACTTTTGAACCGGCGGGCACGGCCGGGCGCAGAATGGCATTGAGTGGGAATCCCCCCTACTTTTGCAGGAGTGAGCGGCCACCCAGTCAGCTGCGCGCCTTCATATGGGAATCCCCCCTACTTTTTAACCCGTGGGCACGGCCGGGTGCAGAATGGCATTGTGTGGGAATCCCCCCTACTTTTGCAGAAGCGAGCGGCTGGCCAGTCAGCCGTGCGCCGTCATATGGGAATCAGCCCTACTTTTGAACCGGCGAGCACGGCCGGGCGCAGAATGGCATTGAGTGGGAATCCCCCCTACTTTTG

>NC_014304|1|1|85363-86036|CRT
TGGGAATAAGCCCTACTTATG	AGCCAGCAGGCGCGGTCGTGCGCAGAAAGATATCGAG
TGGGAATCCCCCCTACTTTTG	CAGGAGTGAGCGGCCGGCCAGTCAGCTGCGCGCCGTCATA
TGGGAATCAGCCCTACTTTTG	AACCGGCGGGCACGGCCGGGCGCAGAATGATATCGAG
TGGGAATCCCCCCTACTTTTG	CAGGAGTGAGCGGCCACCCAGTCAGCTGCGCGCCTTCATA
TGGGAATCCCCCCTACTTTTT	AACCCGTGGGCACGGCCGGGTGCAGAATGGCATTGTG
TGGGAACCCCCCCTACTTTTG	CAGAAGCGAGCGGCTGGCCAGTCAGCCGTGCGCCGTCATA
TGGGAATCAGCCCTACTTTTG	AACCGGCGGGCACGGCCGGGCGCAGAATGGCATTGAG
TGGGAATCCCCCCTACTTTTG	CAGGAGTGAGCGGCCACCCAGTCAGCTGCGCGCCTTCATA
TGGGAATCCCCCCTACTTTTT	AACCCGTGGGCACGGCCGGGTGCAGAATGGCATTGTG
TGGGAATCCCCCCTACTTTTG	CAGAAGCGAGCGGCTGGCCAGTCAGCCGTGCGCCGTCATA
TGGGAATCAGCCCTACTTTTG	AACCGGCGAGCACGGCCGGGCGCAGAATGGCATTGAG
TGGGAATCCCCCCTACTTTTG

Protein	Signature genes	Signature genes Name	Protein_function
NC_014304.1\|WP_013199812.1\|87860_88307_+\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	unknown	unknown	gnl\|CDD\|182350
NC_014304.1\|WP_010260801.1\|91844_92246_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319924
NC_014304.1\|WP_013199799.1\|76944_77625_-\|SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|223363
NC_014304.1\|WP_013199810.1\|86075_86768_-\|replication-initiation-protein	unknown	unknown	gnl\|CDD\|376444
NC_014304.1\|WP_013199806.1\|81514_81856_-\|hypothetical-protein	unknown	unknown	unknown
NC_014304.1\|WP_013199801.1\|78022_78961_-\|DUF1281-domain-containing-protein	unknown	unknown	gnl\|CDD\|369139
NC_014304.1\|WP_010260799.1\|88616_89600_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|234698
NC_014304.1\|WP_013199805.1\|81156_81501_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|179139
NC_014304.1\|WP_013199807.1\|82609_83503_-\|integrase-domain-containing-protein	unknown	unknown	gnl\|CDD\|372340
NC_014304.1\|WP_013199808.1\|84424_85057_+\|hypothetical-protein	unknown	unknown	unknown
NC_014304.1\|WP_010260804.1\|92379_92754_-\|fluoride-efflux-transporter-CrcB	unknown	unknown	gnl\|CDD\|184564
NC_014304.1\|WP_013199804.1\|80480_81089_-\|hypothetical-protein	unknown	unknown	unknown
NC_014304.1\|WP_013199811.1\|87272_87590_+\|antirestriction-protein-ArdK	unknown	unknown	gnl\|CDD\|374591
NC_014304.1\|WP_013199814.1\|92765_93467_-\|2,3-bisphosphoglycerate-dependent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|184516
NC_014304.1\|WP_013199800.1\|77714_78026_-\|hypothetical-protein	unknown	unknown	unknown
NC_014304.1\|WP_010260810.1\|93510_94800_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NC_014304.1\|WP_013199813.1\|89601_91719_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271187
NC_014304.1\|WP_017802818.1\|81955_82303_-\|hypothetical-protein	unknown	unknown	unknown
NC_014304.1\|WP_013199802.1\|79064_80051_-\|DUF1738-domain-containing-protein	unknown	unknown	gnl\|CDD\|226680
NC_014304.1\|WP_041691781.1\|88309_88546_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|179607

Protein	Function_ID	Function_description	E-value
NC_014304.1\|WP_013199812.1\|87860_88307_+\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	gnl\|CDD\|182350	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit.	6.4445e-49
NC_014304.1\|WP_010260801.1\|91844_92246_+\|VOC-family-protein	gnl\|CDD\|319924	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.56607e-40
NC_014304.1\|WP_013199810.1\|86075_86768_-\|replication-initiation-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	1.61523e-52
NC_014304.1\|WP_013199811.1\|87272_87590_+\|antirestriction-protein-ArdK	gnl\|CDD\|374591	pfam16509, KORA, TrfB plasmid transcriptional repressor. KORA is a family of Gram-negative bacterial proteins that act as global repressors of genes involved in plasmid replication, conjugative transfer and stable inheritance in the IncP group of plasmids. KORA operates as a symmetric dimer, and contacts the DNA via the helix-turn-helix region at the N-terminus.	4.8884e-32
NC_014304.1\|WP_010260799.1\|88616_89600_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|234698	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed.	3.23134e-32
NC_014304.1\|WP_013199805.1\|81156_81501_-\|hypothetical-protein	gnl\|CDD\|179139	PRK00843, egsA, NAD(P)-dependent glycerol-1-phosphate dehydrogenase; Reviewed.	0.00891932
NC_014304.1\|WP_013199807.1\|82609_83503_-\|integrase-domain-containing-protein	gnl\|CDD\|372340	pfam12835, Integrase_1, Integrase. This is a family of DNA-binding prophage integrases found in Proteobacteria.	3.7013e-69
NC_014304.1\|WP_013199801.1\|78022_78961_-\|DUF1281-domain-containing-protein	gnl\|CDD\|369139	pfam06924, DUF1281, Protein of unknown function (DUF1281). This family consists of several hypothetical enterobacterial proteins of around 170 residues in length. Members of this family are found in Escherichia coli, Salmonella typhimurium and Shigella species. The function of this family is unknown.	6.90923e-105
NC_014304.1\|WP_010260804.1\|92379_92754_-\|fluoride-efflux-transporter-CrcB	gnl\|CDD\|184564	PRK14196, PRK14196, fluoride efflux transporter CrcB.	1.52254e-57
NC_014304.1\|WP_013199799.1\|76944_77625_-\|SAM-dependent-DNA-methyltransferase	gnl\|CDD\|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	0.00643751
NC_014304.1\|WP_010260810.1\|93510_94800_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NC_014304.1\|WP_041691781.1\|88309_88546_+\|hypothetical-protein	gnl\|CDD\|179607	PRK03609, umuC, translesion error-prone DNA polymerase V subunit UmuC.	8.44638e-45
NC_014304.1\|WP_013199814.1\|92765_93467_-\|2,3-bisphosphoglycerate-dependent-phosphoglycerate-mutase	gnl\|CDD\|184516	PRK14115, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase.	4.68947e-111
NC_014304.1\|WP_013199802.1\|79064_80051_-\|DUF1738-domain-containing-protein	gnl\|CDD\|226680	COG4227, COG4227, Antirestriction protein [DNA replication, recombination, and repair].	1.73471e-87
NC_014304.1\|WP_013199813.1\|89601_91719_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271187	cd01187, INT_tnpB_C_Tn554, Putative Transposase B from transposon Tn554, C-terminal catalytic domain. This family includes putative Transposase B from transposon Tn554. It belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain containing six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	3.50511e-16

>NC_014304.1|WP_013199808.1|84424_85057_+|hypothetical-protein
MEFMDWLRNIGFFIPLIAIVVSLNARLKTFNNERISVYKDMKSLSSELEMEGYEIKVIDDELKKLIVREVTGIVEITPARRLMKILSCNPKLDSFKRKRLKSLIRSIRETEHLNKEEIAEVKFNLNKKLYKKSAKEGAIYIFAFLIGYITFLFSGLSSLADKDYLWASIQIIMSFALLIAMMLTKASYPAPWNGRKHKKFTDELNSYKNH
>NC_014304.1|WP_013199807.1|82609_83503_-|integrase-domain-containing-protein
MSGKLGKQLVTLARQGGGSFKTISDRSKIASRFSERLANLNIQIRDVSHIKTKHIENYIRSRQGENISSRTLQNEMAALRSILTQGGRNVLANPTHEKLSNQALNISGASREGTKVAISDSRLIEILSLVSEKDRGIAISIQLARYIGLRAEETVQSAKSLNTWRKSLQAGNDNVRVVFGTKGGRPRDATIFEKEKVIGLLNDAVRYVEGNNGKLIDKPTLHQALDRYHNVLRESGMTGIHAPHSLRYAYSQDAVNYHLENGMSRKEAEALVSMDLGHGDGRGAYVARVYNRVDDED
>NC_014304.1|WP_017802818.1|81955_82303_-|hypothetical-protein
MSITRSFLKELRLPFDLVLSVATRVASECPDLKAALRGTSWLASPSGHYEFHSRVWFDDQRYHAIVMARTSVNGQPGDEFIFSRHGKHFTHKAAAKAAQLATSDAASLRVFTAQM
>NC_014304.1|WP_013199806.1|81514_81856_-|hypothetical-protein
MHTLSLATSFSIKAFFSSLSAAVISKCDRVAVANSKEEWITNRAGSLSFKIQIHQLPSGKWTSGILTRSGTFYGNHRFGSLNAPGEVFRSYSQARRSALKLANQAATLRYAYQ
>NC_014304.1|WP_013199805.1|81156_81501_-|hypothetical-protein
MTLSTTITDMLQLADFEGDMLMALAYQTLGLDDLDEQVQIKAEMPFSMAVHYDVIYSLEFGRAQGRYLTSGCADMISSILTMSVRLDPELHKSVSYSGHHDGRGDLEIARLESL
>NC_014304.1|WP_013199804.1|80480_81089_-|hypothetical-protein
MTPISAPPQHVTYNVKQTGWISPSQWHNFTLAVTEAFWLLPVHLRPCSPTNGTRMERASMMYPSPEIFAFSGKDEGDYISKGVIFTQDLSSDLSIETKGQPIDFFTRIALILLYQHCEGCYEISSSAGGVSWALPVRWAIRHHLITDSDSPQPFSTAGFITGAADELLIRSVSGAERPFTTAEWGLISELEFTLEELKAGKR
>NC_014304.1|WP_013199802.1|79064_80051_-|DUF1738-domain-containing-protein
MTKPTKTRRTKKTESVDLYQKVTDRIVEALEKGVAPWKKPWRTAGRCAAAGPLPVNALTGKPYSGVNVLLLWLAAEEKGYSTDRWVTYRQAQEMGGQVRKGETSSEAIIFKPFEKQAEDLSGNKLFDADGKPLMESRAMIKPNFLFNVEQCDGLPEGVAAVPHESPVTEYPGTLDWPTEKRICEIVHLAGVKVEFKLQNRAYYARRTDSILMPVADQFFTHADYFSTMLHEVVHATGHESRLNREGITKTSKKFGDPVYAFEELIAEMGSAFLCAQLGVFGDVQHDSYIKSWLEVLKSDKKALFRACRQAREASEFLLQLTDRAAEAA
>NC_014304.1|WP_013199801.1|78022_78961_-|DUF1281-domain-containing-protein
MSDWCHNRLEITGKSALIGIMEEWITGEAVPLYRHAVMRSIKLFLAGCGGLLRPVKTESFTPFPGLMQSGTGLGTPANMAFDQWLGLLRRDVPLDGEHLRTIERIYHQSGIDAIRWESIPEVSRRHIARLIEERYADWFGVATLSREIVPGQCWERLSHLPERAQPCDMLQIIPSRLAAELNGTGGLLAGMSTASSLYCRQYGMEWPAGHNVSWQREGLSSIKLEFDSAWFPPAGELVAALSSTFDCEIRHWYSEPVHELDGYDCYDRGDHVCSAEATIDELDDDRPGLHLVPAAEPGEPKTGSSVNRTVQA
>NC_014304.1|WP_013199800.1|77714_78026_-|hypothetical-protein
MSGNGEYLRCRVVSTAHISADDNALLDEITTRSIDHGEWIHYIGGGYLLRLTSCSAPVLRLKEVGLSKEARRVIASVMRSDAVEILIFESGAPEIEGFTTYSW
>NC_014304.1|WP_013199799.1|76944_77625_-|SAM-dependent-DNA-methyltransferase
MTSTNHRKAFLALFKATARYHHRHKVFEDFVSCAAIALHNGVAHDAELEKQYLSIIAGYEKEDVTQMAALLGHVVMAIDQERCDFLGSVFMELELGDKYRGQFFTPWDVSQMMASMQLSGIDALMQAQDFITLQEPASGAGCMVIAFAEEFAKRGYTVSEQLWVSVTDVDPLAANMSYIQLSLCGIAAEVVTGHALTLERRRTLYTPLHYTGRWAVKLGRAEQHAA
>NC_014304.1|WP_013199810.1|86075_86768_-|replication-initiation-protein
MANQLKKKINVKQSNELTEAAYHLSLKSKRVLWLCLMQTYFTDDNDDASPVFNVAVSDYEDIFNISRNQASRDVKEGVIELSRASILFYPKNGRNDIRALPWLIEAGGRSSKGQWEIEFNPRVMPYLYVLGNQFTTYSLRDCGSLKNPRTVRLYESLCQFRSTGIWKTSHEWLADRFMLPDSQRNNSAELKRSFLEPALRQINDKTPLSVTYQADNNGKMIFDIYQKNGV
>NC_014304.1|WP_013199811.1|87272_87590_+|antirestriction-protein-ArdK
MAHKRKISQEEWDRILPAMETFADITTQIAYLVLVKDEKQSDVATNLARSKQNVGNAVKRVWDLYTELEHAEGRKLHFVSVWIPEEEAIKVKKIAAQFPINKLSS
>NC_014304.1|WP_013199812.1|87860_88307_+|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit
MNGDKLSALTILCPPESCPQLRVPLFADPCAAGFPSPAQDYVESELDLNELCIRRRASTFFVRASGSSMQELGLFDGDVMVVDRAEEASQGDIVIAEVNGEFTVKRLQLQPCLALLPMNPAYPVIYPEDLQLLGVVTWWFNSTRARRR
>NC_014304.1|WP_041691781.1|88309_88546_+|hypothetical-protein
MPMFGLADVNSFYASCEALFRPDLRGKPVIVLSNNDGCVIARSAGAKALGIKMGAPWFQIKKETYSDVIHTFSSNYAL
>NC_014304.1|WP_010260799.1|88616_89600_+|tyrosine-type-recombinase/integrase
MLIPPSEHVLLLAERWLQLLSDLGRAQATLTAYRNALRHYFAFCSQNGIKPEKARFEDLAAYISPQLPGMPFSAASATLQLRLSAIRLWYDFLMYLDLCTVNPLPRSGTPGMLSSGRGLVPRVVKLPRIPDDAQWQCFLYHAAASPLRDRLMLALTYYGALRRSEITSLSIDDFDFAHRLIRIRAETTKSRRERIVCYSPAVVPVLAAHLMQMKRTGIVRGALFRSESDRNQGGPLSFWTWSKTVRKWALESGMPDISTHTFRHLRLTHLARAGWKLHELATYAGHRDLTTTQIYIHLSGRDLAARMAGAIETADIRMANLIFRTEK
>NC_014304.1|WP_013199813.1|89601_91719_+|tyrosine-type-recombinase/integrase
MSPHTPIENSRHPFDMTEYRLEASLTLAERTALSSAHSRSRMLRTKPVPDLIRPLMDIAAGSGCGSKITGLVIAGLLREMHADGMPCWCWPQERWLTLCREVREGRPLMAAFAWHLADLHDPLSLPDIRKPALYASAIFGQAFYHQELDRLTDTLTSLGYAPTSQKNHVSGILATLMIMNRDPRLETFTPELLWRAQSGTDKGISRYVGRVSHALAALGIISAPVRMRNYKKWYEKPVEGVDPAWVHWCRRWRETSVLRPRTRESQYSFILRCGLWLKKEHPEVREPADWTMETCASFIAAVGRMNVDELQLGTERGTRKSVRSGEPMMPHSRAHFIYSLRRFMIDYENWGWGRLHFSPARHLSTPDTPLFRRGVNPRVIDDPVWLKLIWASLNLRQEDLLTEIHYPLAMLQAMAVIWTHAGVRKNELLRLTTGCIAPQADDIVKDDGSIIPAGTLCYLHIPAGKTSKAFVKPVAAVVKKYVDIWLDERPAEQALLADERTGEKVRLLFQYRGKPAGSAILNRTVIPMLCARAGVPCEDSGGMITSHRGRASAVTALASVPQGMSLYELMQWTGHSTPQSTMHYLRIRPTQLAASFVKADRVAHMISVLVDHDPEAASLSGPATYYDLGDSYCTNPFWSSCPHRMACIGCDFNLLKDSARGLILESKASIRRYLEEVPLTPDERAILEQDAEKVEQALTRLGPQS
>NC_014304.1|WP_010260801.1|91844_92246_+|VOC-family-protein
MRKQKRCMGYVAVVVDDYDRAIEYYTDKLGFTLIEDTPQPGKRWVVVTPAPDSDCAILLARASNDRQEGFIGNQCGGRVFLFLQTDDFWRDYNAMKAKGVHFFQEPREEEYGMVVVFEDIYGNRWDLYQNRQA
>NC_014304.1|WP_010260804.1|92379_92754_-|fluoride-efflux-transporter-CrcB
MNQLFAVITGGALGCVIRWQLGARLNALFPDLPPGTLLVNLLGGFIIGAALAYFLRHPGLDPAWRLLITTGLCGGMTTFSTFSAEVFALLQSGSYAWAAASVLIHVLGSLAMTAAGFYIMTLCG
>NC_014304.1|WP_013199814.1|92765_93467_-|2,3-bisphosphoglycerate-dependent-phosphoglycerate-mutase
MAPSTLILLRHGESQWNRENRFTGWTDVPLTDRGRQEADRAGDVLRDAGLLPDRVFTSVMTRCVHTVWRVLDRLGRSWTPVDKHWRLNERHYGALQGLNKEAAARMMGAETVRLWRKSFSGIPPADAGAPAQLRRDPRYSRVALADLPATESLEMTLRRVMPYWQHAVMPQILCGSTVLVVAHGNTLRALAAFLDGMPHDSLAQLHIPTGVPAVYQMDAAAQVVSRYVLNIKK
>NC_014304.1|WP_010260810.1|93510_94800_-|phosphopyruvate-hydratase
MRFTLDNVTAREILDSRGNPTVEVEARTVDGMMARASVPSGASTGSREAAERRDGDVHRFGGKGVLDAVRTVNTEICEALRGRDVREQRQLDNIMLALDGTQSKSRLGANAILGVSLAVARLAAQASHEPLWRYLGGLQANLLPVPCMNIINGGVHARGQGADFQEFMIAPHGAPTLREAVRQGSEVYQALRQILLDKNLSAAVGDEGGFAPAVSSNRDPLAFIVQAIEKAGYRPGEDISICMDPASSEFFADGKYHLRTEGSALSAAEMTAYYGELMDQFPVILLEDGLAEDDWSGWKHLHQQLAGRAELVGDDLFVTNVKYIQRGIDENLASAALIKLNQIGSLSETLDAVALCQRHGWGAFMSHRSGETTDTFLADLTVALRAGHLKTGAPCRGERVEKYNQLMRIEQALGEDAHYAGLHAFVRRT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_014304_1	1.1\|85384\|37\|NC_014304\|CRT	85384-85420	37	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85384-85420	0	1.0
NC_014304_1	1.1\|85384\|37\|NC_014304\|CRT	85384-85420	37	NC_019310	Erwinia amylovora plasmid pEM65, complete sequence	1846-1882	0	1.0
NC_014304_1	1.2\|85442\|40\|NC_014304\|CRT	85442-85481	40	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85442-85481	0	1.0
NC_014304_1	1.3\|85503\|37\|NC_014304\|CRT	85503-85539	37	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85503-85539	0	1.0
NC_014304_1	1.4\|85561\|40\|NC_014304\|CRT	85561-85600	40	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85561-85600	0	1.0
NC_014304_1	1.4\|85561\|40\|NC_014304\|CRT	85561-85600	40	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85799-85838	0	1.0
NC_014304_1	1.5\|85622\|37\|NC_014304\|CRT	85622-85658	37	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85622-85658	0	1.0
NC_014304_1	1.5\|85622\|37\|NC_014304\|CRT	85622-85658	37	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85860-85896	0	1.0
NC_014304_1	1.6\|85680\|40\|NC_014304\|CRT	85680-85719	40	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85680-85719	0	1.0
NC_014304_1	1.6\|85680\|40\|NC_014304\|CRT	85680-85719	40	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85918-85957	0	1.0
NC_014304_1	1.7\|85741\|37\|NC_014304\|CRT	85741-85777	37	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85741-85777	0	1.0
NC_014304_1	1.8\|85799\|40\|NC_014304\|CRT	85799-85838	40	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85561-85600	0	1.0
NC_014304_1	1.8\|85799\|40\|NC_014304\|CRT	85799-85838	40	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85799-85838	0	1.0
NC_014304_1	1.9\|85860\|37\|NC_014304\|CRT	85860-85896	37	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85622-85658	0	1.0
NC_014304_1	1.9\|85860\|37\|NC_014304\|CRT	85860-85896	37	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85860-85896	0	1.0
NC_014304_1	1.10\|85918\|40\|NC_014304\|CRT	85918-85957	40	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85680-85719	0	1.0
NC_014304_1	1.10\|85918\|40\|NC_014304\|CRT	85918-85957	40	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85918-85957	0	1.0
NC_014304_1	1.11\|85979\|37\|NC_014304\|CRT	85979-86015	37	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85979-86015	0	1.0
NC_014304_1	1.7\|85741\|37\|NC_014304\|CRT	85741-85777	37	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85979-86015	1	0.973
NC_014304_1	1.11\|85979\|37\|NC_014304\|CRT	85979-86015	37	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	85741-85777	1	0.973

1. spacer 1.1|85384|37|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

agccagcaggcgcggtcgtgcgcagaaagatatcgag	CRISPR spacer
agccagcaggcgcggtcgtgcgcagaaagatatcgag	Protospacer
*************************************

2. spacer 1.1|85384|37|NC_014304|CRT matches to NC_019310 (Erwinia amylovora plasmid pEM65, complete sequence) position: , mismatch: 0, identity: 1.0

agccagcaggcgcggtcgtgcgcagaaagatatcgag	CRISPR spacer
agccagcaggcgcggtcgtgcgcagaaagatatcgag	Protospacer
*************************************

3. spacer 1.2|85442|40|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

caggagtgagcggccggccagtcagctgcgcgccgtcata	CRISPR spacer
caggagtgagcggccggccagtcagctgcgcgccgtcata	Protospacer
****************************************

4. spacer 1.3|85503|37|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

aaccggcgggcacggccgggcgcagaatgatatcgag	CRISPR spacer
aaccggcgggcacggccgggcgcagaatgatatcgag	Protospacer
*************************************

5. spacer 1.4|85561|40|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

caggagtgagcggccacccagtcagctgcgcgccttcata	CRISPR spacer
caggagtgagcggccacccagtcagctgcgcgccttcata	Protospacer
****************************************

6. spacer 1.4|85561|40|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

caggagtgagcggccacccagtcagctgcgcgccttcata	CRISPR spacer
caggagtgagcggccacccagtcagctgcgcgccttcata	Protospacer
****************************************

7. spacer 1.5|85622|37|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

aacccgtgggcacggccgggtgcagaatggcattgtg	CRISPR spacer
aacccgtgggcacggccgggtgcagaatggcattgtg	Protospacer
*************************************

8. spacer 1.5|85622|37|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

aacccgtgggcacggccgggtgcagaatggcattgtg	CRISPR spacer
aacccgtgggcacggccgggtgcagaatggcattgtg	Protospacer
*************************************

9. spacer 1.6|85680|40|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

cagaagcgagcggctggccagtcagccgtgcgccgtcata	CRISPR spacer
cagaagcgagcggctggccagtcagccgtgcgccgtcata	Protospacer
****************************************

10. spacer 1.6|85680|40|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

cagaagcgagcggctggccagtcagccgtgcgccgtcata	CRISPR spacer
cagaagcgagcggctggccagtcagccgtgcgccgtcata	Protospacer
****************************************

11. spacer 1.7|85741|37|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

aaccggcgggcacggccgggcgcagaatggcattgag	CRISPR spacer
aaccggcgggcacggccgggcgcagaatggcattgag	Protospacer
*************************************

12. spacer 1.8|85799|40|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

caggagtgagcggccacccagtcagctgcgcgccttcata	CRISPR spacer
caggagtgagcggccacccagtcagctgcgcgccttcata	Protospacer
****************************************

13. spacer 1.8|85799|40|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

caggagtgagcggccacccagtcagctgcgcgccttcata	CRISPR spacer
caggagtgagcggccacccagtcagctgcgcgccttcata	Protospacer
****************************************

14. spacer 1.9|85860|37|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

aacccgtgggcacggccgggtgcagaatggcattgtg	CRISPR spacer
aacccgtgggcacggccgggtgcagaatggcattgtg	Protospacer
*************************************

15. spacer 1.9|85860|37|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

aacccgtgggcacggccgggtgcagaatggcattgtg	CRISPR spacer
aacccgtgggcacggccgggtgcagaatggcattgtg	Protospacer
*************************************

16. spacer 1.10|85918|40|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

cagaagcgagcggctggccagtcagccgtgcgccgtcata	CRISPR spacer
cagaagcgagcggctggccagtcagccgtgcgccgtcata	Protospacer
****************************************

17. spacer 1.10|85918|40|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

cagaagcgagcggctggccagtcagccgtgcgccgtcata	CRISPR spacer
cagaagcgagcggctggccagtcagccgtgcgccgtcata	Protospacer
****************************************

18. spacer 1.11|85979|37|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 0, identity: 1.0

aaccggcgagcacggccgggcgcagaatggcattgag	CRISPR spacer
aaccggcgagcacggccgggcgcagaatggcattgag	Protospacer
*************************************

19. spacer 1.7|85741|37|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 1, identity: 0.973

aaccggcgggcacggccgggcgcagaatggcattgag	CRISPR spacer
aaccggcgagcacggccgggcgcagaatggcattgag	Protospacer
********.****************************

20. spacer 1.11|85979|37|NC_014304|CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 1, identity: 0.973

aaccggcgagcacggccgggcgcagaatggcattgag	CRISPR spacer
aaccggcgggcacggccgggcgcagaatggcattgag	Protospacer
********.****************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 4130

Macacine_betaherpesvirus(50.0%)

integrase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013199715.1\|549_1263_-\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	7.5e-16	43.4
WP_013199716.1\|1426_1708_-	hypothetical protein	NA	NA	NA	NA
WP_013199718.1\|2229_2892_+	hypothetical protein	NA	NA	NA	NA
WP_013199719.1\|3012_3306_-	hypothetical protein	NA	NA	NA	NA
WP_013199720.1\|3305_4130_-	ParA family protein	F0PIG8	Enterococcus_phage	4.7e-14	31.8

DBSCAN-SWA_2

11137 : 17250

uncultured_Caudovirales_phage(83.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173363011.1\|11137_11449_-	DNA polymerase III subunit theta	A0A2H4J4A9	uncultured_Caudovirales_phage	2.2e-20	72.1
WP_013199730.1\|11503_12169_+	SOS response-associated peptidase family protein	A0A2H4J5W2	uncultured_Caudovirales_phage	1.8e-109	78.7
WP_013199731.1\|13800_14796_+\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	5.3e-20	29.6
WP_013199732.1\|15050_15404_+	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	1.0e-21	54.8
WP_013199733.1\|15488_16772_+	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	1.2e-173	73.9
WP_041691775.1\|16821_17250_+	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	9.6e-51	69.3

DBSCAN-SWA_3

20454 : 26138

uncultured_Caudovirales_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013199739.1\|20454_22392_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	3.2e-13	32.5
WP_013199742.1\|23464_24046_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_013199744.1\|24546_25308_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_013199745.1\|25331_26138_+	SDR family oxidoreductase	F2NZ40	Diadromus_pulchellus_ascovirus	4.5e-09	29.1

DBSCAN-SWA_4

31579 : 32602

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013199752.1\|31579_32602_+	ornithine cyclodeaminase	A0A1V0SL93	Klosneuvirus	7.0e-92	50.6

DBSCAN-SWA_5

41418 : 42453

Morganella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013199762.1\|41418_42453_+	hypothetical protein	A0A1W6JNS5	Morganella_phage	1.0e-13	23.0

DBSCAN-SWA_6

61443 : 71637

Enterobacteria_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013199784.1\|61443_62043_-	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	5.3e-55	88.0
WP_013199785.1\|62101_62584_-	DUF3577 domain-containing protein	NA	NA	NA	NA
WP_013199786.1\|62928_64995_-	DNA topoisomerase III	A0A1X9I6W8	Streptococcus_phage	3.7e-39	30.3
WP_013199787.1\|65009_65573_-	hypothetical protein	NA	NA	NA	NA
WP_013199788.1\|65573_66287_-	TIGR03761 family integrating conjugative element protein	NA	NA	NA	NA
WP_013199789.1\|66576_67764_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013199790.1\|67840_68089_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	1.1e-06	39.1
WP_013199791.1\|68134_68719_-	DUF2857 domain-containing protein	NA	NA	NA	NA
WP_013199792.1\|68722_70252_-	hypothetical protein	NA	NA	NA	NA
WP_013199793.1\|70248_71637_-	replicative DNA helicase	O80281	Escherichia_phage	2.2e-112	50.7

DBSCAN-SWA_7

75322 : 80051

Acinetobacter_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013199798.1\|75322_76828_-	ATP-dependent helicase	A0A075DXT4	Acinetobacter_phage	2.7e-47	32.4
WP_013199799.1\|76944_77625_-	SAM-dependent DNA methyltransferase	A0A2K9V411	Faecalibacterium_phage	5.4e-24	36.2
WP_013199800.1\|77714_78026_-	hypothetical protein	NA	NA	NA	NA
WP_013199801.1\|78022_78961_-	DUF1281 domain-containing protein	NA	NA	NA	NA
WP_013199802.1\|79064_80051_-	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	2.6e-51	39.9

DBSCAN-SWA_8

86075 : 88546

Morganella_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013199810.1\|86075_86768_-	replication initiation protein	I3WF20	Macacine_betaherpesvirus	4.4e-29	31.1
WP_013199811.1\|87272_87590_+	antirestriction protein ArdK	NA	NA	NA	NA
WP_013199812.1\|87860_88307_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	3.4e-27	52.1
WP_041691781.1\|88309_88546_+	hypothetical protein	A0A1W6JNT0	Morganella_phage	5.5e-24	71.1

DBSCAN-SWA_9

92379 : 94800

uncultured_Caudovirales_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010260804.1\|92379_92754_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	8.1e-30	58.3
WP_013199814.1\|92765_93467_-	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_010260810.1\|93510_94800_-	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	5.3e-121	53.4

DBSCAN-SWA_10

99498 : 100536

Cronobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_081461009.1\|99498_100536_+	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	2.3e-106	57.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_014306

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_014306_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014306_1

1489003-1489129

Orphan

Consensus_repeat	Method
TGTTAAGAAGGCGCCCTAAAGGCGCCTTTTTGCTATCTGCGATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014306_1

>merge|NC_014306|1|1489003-1489129|CRISPRCasFinder
TGTTAAGAAGGCGCCCTAAAGGCGCCTTTTTGCTATCTGCGATTCGTGTAGGATTTGAACCTGCATCCTGCATGACTCACCAATGTTAAGAAGGCGCCCTAAAGGCGCCTTTTTGCTTTCTGCGATT

>NC_014306|1|1|1489003-1489129|CRISPRCasFinder
TGTTAAGAAGGCGCCCTAAAGGCGCCTTTTTGCTATCTGCGATT	CGTGTAGGATTTGAACCTGCATCCTGCATGACTCACCAA
TGTTAAGAAGGCGCCCTAAAGGCGCCTTTTTGCTTTCTGCGATT

Protein	Signature genes	Signature genes Name	Protein_function
NC_014306.1\|WP_013201329.1\|1481095_1482235_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|184965
NC_014306.1\|WP_013201339.1\|1491237_1491747_+\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|234860
NC_014306.1\|WP_041691949.1\|1494606_1497744_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|274362
NC_014306.1\|WP_013201337.1\|1487688_1488507_+\|cell-division-protein-CpoB	unknown	unknown	gnl\|CDD\|182745
NC_014306.1\|WP_013201336.1\|1487160_1487679_+\|peptidoglycan-associated-lipoprotein-Pal	unknown	unknown	gnl\|CDD\|182744
NC_014306.1\|WP_065762065.1\|1482250_1482361_+\|cytochrome-bd-I-oxidase-subunit-CydX	unknown	unknown	gnl\|CDD\|227227
NC_014306.1\|WP_013201333.1\|1483969_1484401_+\|colicin-uptake-protein-TolR	unknown	unknown	gnl\|CDD\|236824
NC_014306.1\|WP_041691948.1\|1493696_1494626_-\|CDF-family-zinc-transporter-ZitB	unknown	unknown	gnl\|CDD\|235130
NC_014306.1\|WP_013201331.1\|1482867_1483272_+\|tol-pal-system-associated-acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|182742
NC_014306.1\|WP_013201332.1\|1483277_1483955_+\|Tol-Pal-system-protein-TolQ	unknown	unknown	gnl\|CDD\|182743
NC_014306.1\|WP_013201340.1\|1491902_1492946_+\|quinolinate-synthase-NadA	unknown	unknown	gnl\|CDD\|236489
NC_014306.1\|WP_013201347.1\|1500273_1501026_-\|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|184516
NC_014306.1\|WP_013201345.1\|1498440_1498788_-\|homeobox-protein-YbgS	unknown	unknown	gnl\|CDD\|372863
NC_014306.1\|WP_013201344.1\|1497725_1498316_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NC_014306.1\|WP_013201341.1\|1492980_1493700_+\|nicotinamide-riboside-transporter-PnuC	unknown	unknown	gnl\|CDD\|185295
NC_014306.1\|WP_013201330.1\|1482360_1482654_+\|cyd-operon-protein-YbgE	unknown	unknown	gnl\|CDD\|236721
NC_014306.1\|WP_013201334.1\|1484430_1485702_+\|cell-envelope-integrity-protein-TolA	unknown	unknown	gnl\|CDD\|236545
NC_014306.1\|WP_013201346.1\|1499080_1500136_+\|3-deoxy-7-phosphoheptulonate-synthase-AroG	unknown	unknown	gnl\|CDD\|236435
NC_014306.1\|WP_013201335.1\|1485823_1487116_+\|Tol-Pal-system-protein-TolB	unknown	unknown	gnl\|CDD\|235143
NC_014306.1\|WP_013201338.1\|1489598_1491059_-\|DNA-3-methyladenine-glycosylase-2-family-protein	unknown	unknown	gnl\|CDD\|223200

Protein	Function_ID	Function_description	E-value
NC_014306.1\|WP_013201329.1\|1481095_1482235_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|184965	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II.	0
NC_014306.1\|WP_013201339.1\|1491237_1491747_+\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|234860	PRK00901, PRK00901, methylated-DNA--protein-cysteine methyltransferase; Provisional.	5.69854e-64
NC_014306.1\|WP_041691949.1\|1494606_1497744_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	1.66447e-58
NC_014306.1\|WP_013201337.1\|1487688_1488507_+\|cell-division-protein-CpoB	gnl\|CDD\|182745	PRK10803, PRK10803, tol-pal system protein YbgF; Provisional.	4.86317e-149
NC_014306.1\|WP_013201336.1\|1487160_1487679_+\|peptidoglycan-associated-lipoprotein-Pal	gnl\|CDD\|182744	PRK10802, PRK10802, peptidoglycan-associated lipoprotein Pal.	1.97835e-119
NC_014306.1\|WP_065762065.1\|1482250_1482361_+\|cytochrome-bd-I-oxidase-subunit-CydX	gnl\|CDD\|227227	COG4890, COG4890, Predicted outer membrane lipoprotein [Function unknown].	8.67166e-11
NC_014306.1\|WP_013201333.1\|1483969_1484401_+\|colicin-uptake-protein-TolR	gnl\|CDD\|236824	PRK11024, PRK11024, colicin uptake protein TolR; Provisional.	3.00722e-97
NC_014306.1\|WP_041691948.1\|1493696_1494626_-\|CDF-family-zinc-transporter-ZitB	gnl\|CDD\|235130	PRK03557, PRK03557, CDF family zinc transporter ZitB.	0
NC_014306.1\|WP_013201331.1\|1482867_1483272_+\|tol-pal-system-associated-acyl-CoA-thioesterase	gnl\|CDD\|182742	PRK10800, PRK10800, acyl-CoA thioesterase YbgC; Provisional.	3.66827e-91
NC_014306.1\|WP_013201332.1\|1483277_1483955_+\|Tol-Pal-system-protein-TolQ	gnl\|CDD\|182743	PRK10801, PRK10801, Tol-Pal system protein TolQ.	1.07577e-165
NC_014306.1\|WP_013201340.1\|1491902_1492946_+\|quinolinate-synthase-NadA	gnl\|CDD\|236489	PRK09375, PRK09375, quinolinate synthase NadA.	0
NC_014306.1\|WP_013201347.1\|1500273_1501026_-\|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	gnl\|CDD\|184516	PRK14115, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase.	0
NC_014306.1\|WP_013201345.1\|1498440_1498788_-\|homeobox-protein-YbgS	gnl\|CDD\|372863	pfam13985, YbgS, YbgS-like protein. This family of proteins is functionally uncharacterized. The family includes the YbgS protein from E. coli. This family of proteins is found in bacteria. Proteins in this family are approximately 130 amino acids in length. Some members of this family are annotated as homeobox protein, but this annotation cannot be verified.	1.56352e-40
NC_014306.1\|WP_013201344.1\|1497725_1498316_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	6.49843e-52
NC_014306.1\|WP_013201341.1\|1492980_1493700_+\|nicotinamide-riboside-transporter-PnuC	gnl\|CDD\|185295	PRK15397, PRK15397, nicotinamide riboside transporter PnuC; Provisional.	1.54895e-165
NC_014306.1\|WP_013201330.1\|1482360_1482654_+\|cyd-operon-protein-YbgE	gnl\|CDD\|236721	PRK10588, PRK10588, hypothetical protein; Provisional.	5.48379e-49
NC_014306.1\|WP_013201334.1\|1484430_1485702_+\|cell-envelope-integrity-protein-TolA	gnl\|CDD\|236545	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional.	4.5941e-50
NC_014306.1\|WP_013201346.1\|1499080_1500136_+\|3-deoxy-7-phosphoheptulonate-synthase-AroG	gnl\|CDD\|236435	PRK09261, PRK09261, phospho-2-dehydro-3-deoxyheptonate aldolase; Validated.	0
NC_014306.1\|WP_013201335.1\|1485823_1487116_+\|Tol-Pal-system-protein-TolB	gnl\|CDD\|235143	PRK03629, tolB, Tol-Pal system protein TolB.	0
NC_014306.1\|WP_013201338.1\|1489598_1491059_-\|DNA-3-methyladenine-glycosylase-2-family-protein	gnl\|CDD\|223200	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair].	5.81341e-64

>NC_014306.1|WP_013201337.1|1487688_1488507_+|cell-division-protein-CpoB
MISNFRLHVLGLSLLVGVAAPWAANAQASISNVGSGSVEDRVTTLERISNAQAQLLQQLQQQLSDSQRDVDSLRGQIQENQYQMNQMTERQKSMYQQIDTLSNGGGNANAQAQGASGDAAAAAGGAAADNAANGNSAASGASAAPVQSGDANTDYNAAVALVLEKKQNEQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKNYPKSPKSPDALYKVGVIMQEKGDTAKAKAVYQQVSKLYPNSDAAKNAAKRAAAL
>NC_014306.1|WP_013201336.1|1487160_1487679_+|peptidoglycan-associated-lipoprotein-Pal
MQLNKVLKGLMLALPVIAVAACSSHKNNNNDQTNGMGDGANANSGMNSGNMSSDEQARLQMQELQKNNIVYFGLDKYDIQSEFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIALGERRATAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDESAYAKNRRAVLVY
>NC_014306.1|WP_013201335.1|1485823_1487116_+|Tol-Pal-system-protein-TolB
MKQAFRVAMSFLLLFVAVAHAEVRIEITQGVNTARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQQPTTAAEVQPAAWTALGIDAVVVGQVQPGADGSYLVSYQLVDTSGNPGAILAQNQYKVTKQWLRYAAHTASDEAFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQNTVHRSPQPLMSPAWSKDGSKLAYVTFESGKSALVVQTLANGAIKQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQINQLTDGRYNSTEPTWFPDSQSLAYTSDQAGRPQIYKISASGGTAQRLTWEGGQNQDADVSSDGKSLVMISTNGGAQHVARQDLETGAVQQLTDTFLDETPSLAPNGTMVIYSSTQGMGSVLQLVSTDGRFKARLPATDGQVKFPAWSPYL
>NC_014306.1|WP_013201334.1|1484430_1485702_+|cell-envelope-integrity-protein-TolA
MSKATEQNDKLKRAIIFSVILHVLVIAVLIWSSFDEHIDASSGGGGGDIDAVMVDPGAIVDQYNRQQNQQSDSKRADNQRKKQAQQQAEELQQKQAAEQQRLKELEKERLQAQQDAKQQAAAQAAEQKQAQDAAKQAQEEQKQAEMAAAKAKSDAKAQADAQAKSAAEAQKKAEAEAKQAAADAQKKAEAEAKKVAAEAKKQADAEAKEAAAEAAKVKAAADAKAKATADAKAKAAEEAKEAKAAAAKEAAEAKEKAAEEAKAKAEASAKAKADAAAKAKAAADAKKKAAADAAKDTSDVDDLLGGLSSGKNAPKQGKSGGAAAGQGNQKKAGASGAAIDSYIGQVQAAIQSKFYDSDTFKGRTCDIHIKIMSDGTLVSATAAGGDAALCQAAINAARMARMPKPPSAEVYQAVKDATLEFKP
>NC_014306.1|WP_013201333.1|1483969_1484401_+|colicin-uptake-protein-TolR
MARTRGRGGRREMKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATDSKTVSSDDNPPVIVEVAGVGQYSLVVDHDRMEQLPPEQVVAEAQRRIEANPKTVFLIGGAKDVPYDEIIKALNLLHQAGVKSVGLMTQPI
>NC_014306.1|WP_013201332.1|1483277_1483955_+|Tol-Pal-system-protein-TolQ
MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGRDADAFEDKFWSGIELSRLYQESQARRDELGGSEQIFYSGFKEFARLHRANNHAPEAVVEGATRAMRISLNREMEALENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFTAILHRQAFSSENTK
>NC_014306.1|WP_013201331.1|1482867_1483272_+|tol-pal-system-associated-acyl-CoA-thioesterase
MSTTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRQHHFNQQALLEQQVAFVVRRITVDYLAAARLDDLLEVQCEVVSMTRTTMTFAQRIVNAEGRTLNEAEVLIACINPHLMKPIALPKSIVAEFKQ
>NC_014306.1|WP_013201330.1|1482360_1482654_+|cyd-operon-protein-YbgE
MGQGITRLYQWMDKSPLRALSLLMALLLAGCMFWDPKRFAANSSSLEIWQGLLMMWAVCTGVIHGVGFRPRRLRWQAFFSPLPAWIVLIFGLAFFFS
>NC_014306.1|WP_065762065.1|1482250_1482361_+|cytochrome-bd-I-oxidase-subunit-CydX
MWYFAWILGTLLACAFGIITALAIEHIEDSEVKEKR
>NC_014306.1|WP_013201329.1|1481095_1482235_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MITYELLRFVWWALIGVLLIGFAVADGFDMGVGMLTRILGRTDTERRIMINSIAPHWDGNQVWLITAGGALFAAWPTVYAAAFSGFYVAMILVLASLFFRPIGFDYRSKLEDNRWRGMWDWAIFIGSFVPPLVIGVAFGNLLQGVPFHMDEYLRLFYTGNFFQLLNPFALLAGIVSLTMILTQGATYLQMRTVGELHVRSRLAAQISALVMVVCFVLAGVWVMYGIDGYAVTSVLDHNAASNPLGKEVVREAGAWMVNFNKTPLLWIIPALGVVLPLLTILCSRLEKGAWAFVFSSLTLACVILTAGVAMFPFIMPSSTMPNMSLTMWDSTSSLLTLKIMTVAAIIFVPIILAYTTWCYYKMFGRLTKEQIENNTHSLY
>NC_014306.1|WP_013201338.1|1489598_1491059_-|DNA-3-methyladenine-glycosylase-2-family-protein
MIDKQVAYRALTSRDVRFDGVFYVGVTSTGIYCRPVCPVKPPHEVNCLFFDSAEAAEKAAFRPCLRCRPELAPGNAPVDSSHRIADLLIQRIEEGLVEDIDSLEEIAAQFSLSSRQLRRIVQKELGVSPLELRQTRRLLLAKQLLTETTLPVTEVAYASGFASLRRFNEVFSRQYRMPPSRLRKEASETGHFISSETSTLLLSYRPPFNWTALLAFLRLRAIKGVESVDNQSYARTVRLGEHTGWVRVTQSDKKHGLQVEFTHSLTPVLPALLRRLKNLFDLDAHPDLIAAHLEQDPLLRDSLTKDAGLRVPGAFDGFEMVVRAILGQQITLKAATTIGGRFAEAFGEAIKTPFPELTQLSPQAARIAVATLDEVASLGIVSARSRTLIAIAQAYDRGELRLDAGTDPDRAIASLVAQPGIGEWTAHYIAMRALRWPDAFPAGDVVVRKNLGSVTAKEAERLSQAWRPWRSYAVMHIWKNLAPGKV
>NC_014306.1|WP_013201339.1|1491237_1491747_+|methylated-DNA--[protein]-cysteine-S-methyltransferase
MSYFCKVMPSPVGALTLIASDLGLTAILWQDDNPNRVRLPDMQENPTHPVLVETERQLNEYFAGTRTTFTMTLDFVGTEFQKKVWQALVAIPFGETRSYADIARDIGNPKAVRAVGAANGKNPISIIAPCHRVIGSNGKLTGFAGGLEVKAFLLKIETAKQGEAEFTLK
>NC_014306.1|WP_013201340.1|1491902_1492946_+|quinolinate-synthase-NadA
MSLMFDPETAVYPFPPKPARLTQDEKQIYREKIKRLLKERNAVMVAHYYTDPEIQALAEETGGCVADSLEMARFGSQHSASTLLVAGVRFMGETAKILSPEKTILMPTLQAECSLDLGCPIDEFNRFCDQHPDRTVVVYANTSAAVKARADWVVTSSIAVELIEHLDSLGEKIIWAPDRHLGQYVTRQTGADILCWQGACIVHDEFKTQALQRMKALYPDAAVLVHPESPQAIVDLADAVGSTSQLIQAAKTLPNPQMIVATDRGIFYKMQQACPDKELLEAPTAGEGATCRTCAHCPWMAMNGLKAIADGLEHGGSQHEIHVDAALREGALISLNRMLTFAASLKG
>NC_014306.1|WP_013201341.1|1492980_1493700_+|nicotinamide-riboside-transporter-PnuC
MDFFSTHNILVHIPLGTGGYDLSWIEAIGTVAGLLCIWLASLEKISNYAFGLINVTLFAVIFFQIQLYASLLLQLFFFVANIYGWYAWSRQTTDNQQALQIRWMTLPKAIGWLLVCVVAIGLMTLYINPVFAWLTKIAVTVMQGVGLSVAMPELQPDAFPFWDSCLMVLSIVAMILMTRKYVENWLLWVIINVISVMIFARQGVYAMSLEYAILTLIALNGCWLWIKSAREQGSRALSS
>NC_014306.1|WP_041691948.1|1493696_1494626_-|CDF-family-zinc-transporter-ZitB
MAHTHSEGTGNRTRLLAAFLVTAVFMVAEVAGGILSGSLALLADAGHMLTDAAALLMALLAVQFAQRKPNARHTFGLLRLTTLAAFVNAIALVVITALIVWEAIVRFRHPEPVAGGFMLTVAVAGLLANLLSFWLLHRGSEEMNLNVRAAALHVLGDLLGSVGAIAAALIIIYTGWTPIDPILSILVSVLVLRSAWALMKESIHELLEGAPPSLDVDKLKRALTQGIPEIRNVHHIHLWQVGEKPVMTLHVHVIPPYDHDALLHRIHDWLHDHYQIEHATVQMEYQSCDDGDCELSWGNGGHEHAHHHH
>NC_014306.1|WP_041691949.1|1494606_1497744_-|transporter-substrate-binding-domain-containing-protein
MEGSAVTRRLLLAVMLLLCLPVAAALRPISSVLMPQEMMPLDQSSKWQDKPLRVGILRDNSTPWNMVVGQDLYGINADYLVALTQTTGLKFQVADYPDWQALQQALLHGKLDIAFGVPQQTLEKGMSATQPWFTSPLRIYRSRENLRPVMFNSTDALITISKSALALIDPAFARQHHWQVVDNDLQALYALLNNKSDYVVADETSAGFLLNQLQQGQIYQLASPLDPGELRLQAITTQPALTERLDMAIRQLPMEVINGIQGRWSSQLPRYQDTNTAHLTPMERSWITQHPVVTYAAIGDDYPWSYRAANGQPSGYSVELLNIIGQNTGLRFQPWWVSNAQQAQALVDQGRAMIQLTLPLTGDDAMRSNTLPIWRALWGVYVGQMSRPATGWQQLQGLKVGIRRGDIARGLIPAGITVVPFEDSKTLYDALANGQIDALVDNVISARWLIQSRYSDALRLAFAASDTAWPITLGVSPAFPLLRTLLNTSLQQIPADTQQRMRETWSNNSSVLSEGAENSMRPISLFVLIAALFAIVFLLVLLIRRYLEQRRERLQRRQLELEREEAERANQMKSQFLATVSHELRTPMQAILGLLEVEVSRTPASKNLNVIHSSASTLLTLLNDLQDHAKLESNSFTLVPQPLDPAKWLSRLADFYHPLMRNNGPLFRVETLPPLPALIMIDGQRLQQIANNLISNAIKFTRQGEIRVTLATENDRLRLQVIDSGSGIPPEEQIRLFEPWYQTPSGRQLSVQGSGLGLSICKEIVARMGGEILLASTPHQGTTLTVFLPLQIVTSDAAMNEPAPVRSPGGTPNVQRVAVVDDHPTNLLVMQQQLAWFGIEADCYPDGRAFLAAGGVYDLLFIDYSMPHPDGVTLAKIIRRGERHTARRCRIVMCSADADILASPQVAALTDKVLLKPVTLNEIEPLLTAGTEVVFADLHQRLWDLAGHDHAFFSKLQKTLQQTLREDSTRLVTALKEQDWEKAEKAAHRLKGSWQMLGYAEGENRCQHIIGQCRAQQQPATELNLLISLTESLLTELESYGAHPF
>NC_014306.1|WP_013201344.1|1497725_1498316_-|response-regulator-transcription-factor
MVTLLLIDDHPLVHVALEAALARAPFPFTLLAAEDENRAHALLAAQPVDIVVLDIGLPDSDGLQLLKFIRRHFPALPVIIYSAQEERLYQRLAEAAGAAGYVAKRQPMPQLLSAILAVLGGQQAFPVSSESETTTHMLTSKEQQILALLARGLSNLQIAEQLNISNKTVSTHKKNIMDKTGASSVVELAGFWKAQQ
>NC_014306.1|WP_013201345.1|1498440_1498788_-|homeobox-protein-YbgS
MMNKFAIVFLTAAMTLGSGAAMAESGNNGTSNQAADAGAAAGGAAQKIAPNGVDNSKINNTGDATSGTTHKTMKHHKKMSAEQIHKNSECKDGKCPNINKKVGPDANTKTDGTTQ
>NC_014306.1|WP_013201346.1|1499080_1500136_+|3-deoxy-7-phosphoheptulonate-synthase-AroG
MNYQNDDLRIKEIKELLPPVALLEKYPATDMAAKTVSDSRQAIHNILKKTDDRLLVVIGPCSIHDTQAAKEYAARLLTLREELSDSLEVVMRVYFEKPRTTVGWKGLINDPHMDNSYQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYMADLMSWGAIGARTTESQVHRELSSGLSCPVGFKNGTDGTIKVAIDAINAASAPHCFLSVTKYGHSAIVETSGNGDCHIILRGGKEPNYSAHHVSAVKTGLEKAGLDPQVMIDFSHANSSKQFQKQLVVSDDVSQQIAGGDKAIIGVMIESHLVEGNQSLESGEPLVYGKSVTDACIGWEDTEKVLRQLADAVKARRAH
>NC_014306.1|WP_013201347.1|1500273_1501026_-|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase
MAVTKLVLVRHGESQWNNENRFTGWYDVDLSDKGRTEAKAAGQLLKKEGFTFDFAYTSVLKRAIHTLWNILDEVDQVWLPVEKSWRLNERHYGALQGLDKAETAQKYGDEQVKQWRRGFAVTPPELDRADERFPGHDPRYAALTAEQLPTTESLALTIDRVLPYWNESILPRMKSGEKVIIAAHGNSLRALVKYLDNMSEEAILELNIPTGVPLVYEFDENFKPIKHYYLGDADEIAAKAAAVANQGKAK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_014306_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014306_2

2666056-2666165

Orphan

Consensus_repeat	Method
CAGACTACTCCGCAGATCCAACAACAAACGCCGATCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014306_2

>merge|NC_014306|2|2666056-2666165|CRISPRCasFinder
CAGACTACTCCGCAGATCCAACAACAAACGCCGATCGCTCAATTGCAGCCTTCAGTACCGCAGGCCGTGCCTCAGACTACTCCGCAGATCCAGCAACAAACGCCGATCGC

>NC_014306|2|2|2666056-2666165|CRISPRCasFinder
CAGACTACTCCGCAGATCCAACAACAAACGCCGATCGC	TCAATTGCAGCCTTCAGTACCGCAGGCCGTGCCT
CAGACTACTCCGCAGATCCAGCAACAAACGCCGATCGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014306.1\|WP_013202378.1\|2670147_2670456_-\|LapA-family-protein	unknown	unknown	gnl\|CDD\|226294
NC_014306.1\|WP_013202368.1\|2660920_2661211_+\|YbdD/YjiX-family-protein	unknown	unknown	gnl\|CDD\|377308
NC_014306.1\|WP_013202367.1\|2658861_2660928_+\|carbon-starvation-protein-A	unknown	unknown	gnl\|CDD\|184976
NC_014306.1\|WP_013202374.1\|2667370_2667589_+\|osmotically-inducible-lipoprotein-OsmB	unknown	unknown	gnl\|CDD\|182532
NC_014306.1\|WP_013202380.1\|2671591_2672185_+\|GTP-cyclohydrolase-II	unknown	unknown	gnl\|CDD\|234745
NC_014306.1\|WP_013202375.1\|2667706_2668033_-\|stress-response-translation-initiation-inhibitor-YciH	unknown	unknown	gnl\|CDD\|181613
NC_014306.1\|WP_013202369.1\|2661370_2663353_+\|cyclic-di-GMP-phosphodiesterase	unknown	unknown	gnl\|CDD\|236645
NC_014306.1\|WP_013202366.1\|2656743_2658684_+\|exoribonuclease-II	unknown	unknown	gnl\|CDD\|179920
NC_014306.1\|WP_013202362.1\|2650220_2651384_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|227286
NC_014306.1\|WP_013202365.1\|2654316_2656626_+\|FdhF/YdeP-family-oxidoreductase	unknown	unknown	gnl\|CDD\|239168
NC_014306.1\|WP_013202377.1\|2668971_2670141_-\|lipopolysaccharide-assembly-protein-LapB	unknown	unknown	gnl\|CDD\|236983
NC_014306.1\|WP_013202373.1\|2666614_2666989_+\|hypothetical-protein	unknown	unknown	unknown
NC_014306.1\|WP_013202376.1\|2668032_2668749_-\|orotidine-5'-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|234695
NC_014306.1\|WP_013202371.1\|2664418_2665120_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NC_014306.1\|WP_013202363.1\|2651372_2652308_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NC_014306.1\|WP_013202379.1\|2670599_2671361_-\|phosphatidylglycerophosphatase-B	unknown	unknown	gnl\|CDD\|182658
NC_014306.1\|WP_013202384.1\|2675601_2675760_-\|YmiA-family-putative-membrane-protein	unknown	unknown	gnl\|CDD\|333720
NC_014306.1\|WP_013202370.1\|2663349_2664219_-\|crotonase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|236338
NC_014306.1\|WP_013202381.1\|2672253_2674938_-\|aconitate-hydratase-AcnA	unknown	unknown	gnl\|CDD\|236445
NC_014306.1\|WP_013202364.1\|2652482_2654075_-\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|182245

Protein	Function_ID	Function_description	E-value
NC_014306.1\|WP_013202378.1\|2670147_2670456_-\|LapA-family-protein	gnl\|CDD\|226294	COG3771, COG3771, Predicted membrane protein [Function unknown].	5.45731e-37
NC_014306.1\|WP_013202368.1\|2660920_2661211_+\|YbdD/YjiX-family-protein	gnl\|CDD\|377308	pfam04328, Sel_put, Selenoprotein, putative. This entry includes a group of putative selenoproteins from Proteobacteria, Actinobacteria and Firmicutes. The invariant cysteine at the C-terminus is encoded by a TGA Sec codon in some Epsilonproteobacteria, suggesting a redox activity for the protein.	4.38713e-21
NC_014306.1\|WP_013202367.1\|2658861_2660928_+\|carbon-starvation-protein-A	gnl\|CDD\|184976	PRK15015, PRK15015, carbon starvation protein CstA.	0
NC_014306.1\|WP_013202380.1\|2671591_2672185_+\|GTP-cyclohydrolase-II	gnl\|CDD\|234745	PRK00393, ribA, GTP cyclohydrolase II RibA.	8.47672e-148
NC_014306.1\|WP_013202375.1\|2667706_2668033_-\|stress-response-translation-initiation-inhibitor-YciH	gnl\|CDD\|181613	PRK09019, PRK09019, stress response translation initiation inhibitor YciH.	1.32935e-63
NC_014306.1\|WP_013202369.1\|2661370_2663353_+\|cyclic-di-GMP-phosphodiesterase	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	0
NC_014306.1\|WP_013202366.1\|2656743_2658684_+\|exoribonuclease-II	gnl\|CDD\|179920	PRK05054, PRK05054, exoribonuclease II; Provisional.	0
NC_014306.1\|WP_013202374.1\|2667370_2667589_+\|osmotically-inducible-lipoprotein-OsmB	gnl\|CDD\|182532	PRK10540, PRK10540, osmotically-inducible lipoprotein OsmB.	2.3084e-20
NC_014306.1\|WP_013202365.1\|2654316_2656626_+\|FdhF/YdeP-family-oxidoreductase	gnl\|CDD\|239168	cd02767, MopB_ydeP, The MopB_ydeP CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative molybdopterin cofactor binding site. These members belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NC_014306.1\|WP_013202377.1\|2668971_2670141_-\|lipopolysaccharide-assembly-protein-LapB	gnl\|CDD\|236983	PRK11788, PRK11788, tetratricopeptide repeat protein; Provisional.	0
NC_014306.1\|WP_013202376.1\|2668032_2668749_-\|orotidine-5'-phosphate-decarboxylase	gnl\|CDD\|234695	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase.	8.13443e-139
NC_014306.1\|WP_013202371.1\|2664418_2665120_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	3.3532e-170
NC_014306.1\|WP_013202363.1\|2651372_2652308_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	4.40319e-36
NC_014306.1\|WP_013202379.1\|2670599_2671361_-\|phosphatidylglycerophosphatase-B	gnl\|CDD\|182658	PRK10699, PRK10699, phosphatidylglycerophosphatase B; Provisional.	2.22546e-134
NC_014306.1\|WP_013202384.1\|2675601_2675760_-\|YmiA-family-putative-membrane-protein	gnl\|CDD\|333720	NF000536, YmiA, YmiA family putative membrane protein.	1.06586e-14
NC_014306.1\|WP_013202362.1\|2650220_2651384_+\|oxidoreductase	gnl\|CDD\|227286	COG4950, COG4950, Uncharacterized protein conserved in bacteria [Function unknown].	1.21192e-49
NC_014306.1\|WP_013202370.1\|2663349_2664219_-\|crotonase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|236338	PRK08788, PRK08788, enoyl-CoA hydratase; Validated.	3.846e-177
NC_014306.1\|WP_013202381.1\|2672253_2674938_-\|aconitate-hydratase-AcnA	gnl\|CDD\|236445	PRK09277, PRK09277, aconitate hydratase AcnA.	0
NC_014306.1\|WP_013202364.1\|2652482_2654075_-\|PTS-transporter-subunit-EIIC	gnl\|CDD\|182245	PRK10110, PRK10110, PTS maltose transporter subunit IICB.	1.32005e-150

>NC_014306.1|WP_013202371.1|2664418_2665120_-|L-ribulose-5-phosphate-4-epimerase
MLEQLKQQVLEANLALPKHGLVVFTWGNVSALDRDSGLMVIKPSGVSYDVMQRDDMVVVNVATGEVVEGNKRPSSDTDTHRALYQAWPEVGSIVHTHSRHATIWAQSGRDIPAWGTTHADDFYGAIPCTRQMTPEEIQTRYEWETGQVIIETFQQREIDPLAVPAVLVNSHGPFCWGKTADEAVHSAVVLEEVAYMGIFSQQLTANLPAIQQPLLDNHYLRKHGTNAWYGQKK
>NC_014306.1|WP_013202370.1|2663349_2664219_-|crotonase/enoyl-CoA-hydratase-family-protein
MTVINQTTCRLFSEVGQTTQLSAYYEEGRRTMWMLLRAQPRPSFNHELIEEIMNLSYAAQRSGLPIDFWVTGSLVPTMFNAGGDLRFFVESIKNGRREALRAYARACVDCIHAAARGFDTGAVSIAMIEGSALGGGFEAALAHHFILAQNTARMGFPEIAFNLFPGMGGYSLVARRSGMKLAEELICEGESHTAEWFEQRGLVDKLFQPGDGYQATRTFIDTMKPKLNGVKAMLKARQRVLQLTRAELMDITEDWVDFAFTIEPKDIAYMERLVQLQNRHSAQVLRKVG
>NC_014306.1|WP_013202369.1|2661370_2663353_+|cyclic-di-GMP-phosphodiesterase
MTDEPGQSLLYTYFGTTSPHWRLMADSDALLFAEDEQASTHIAVALTGPQASLIRSMTVITSSVNLTLSLYGEPLSMHLVGRRVNQTSWAGSASAWGDTSAVARDLVLGLSFAEQVVSEANSVIVIVDQRGNIQRFNRLSEEYTGLKEQEVIGRNVFQLFMTKQEASSSRRNISGFFRDGSSYEVERWIKTKKGQRLFLFRNKFVHSGSGKNEIYLICSGTDITEERRAQERLRVLANTDTITGLPNRNAINHAIAEALEQRVEQQIGIVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAILSCLDKDQTLARLGGDEFIVLATAASQASLEAMASRILDRLKQPFRIGLIEVYSGCSIGIAVSPQHGEDKESLMRNADTAMYTAKENGRGKFCIFSAEMNQRVFEYLWLDTNLRKALDQNQLIIHYQPKVDGNGEVKSVEALVRWLSPERGLVPPGDFISYAEESGLIVPLGRWVMLTALEQVVRWREKGIDLRVAVNVSARQLTDQSIYTDLKLALEQLNLSRCPIDIELTESCLIENEEKALALMLQFQQLGAEVHLDDFGTGYSSLSQLARVPIDAIKLDQSFVRNVNDQPVSQSLVKAIVAVAKALDLQVIAEGIETKEEEAFVLASGVDTRQGYLYARPMPADDIEHWLANRTNA
>NC_014306.1|WP_013202368.1|2660920_2661211_+|YbdD/YjiX-family-protein
MSDAIYAIPKRRSLIIYRCLAMNSTKSPEKLTLRLLMSRVAQTFRLMVGVQDYPGYLRHMNQQHPQTKPMTEKEFHRYCLDARFPSKAGKLGKCPC
>NC_014306.1|WP_013202367.1|2658861_2660928_+|carbon-starvation-protein-A
MKNVKTGVTWSAVALIGAGAFAMLALSRGEHVNALWLVVASIACYSIAYRFYSLFIAKNIFELDDRRRTPAERNNDGLDYVPTNKWVLFGHHFAAIAGAGPLVGPILAAQMGFLPGTIWILVGVMMAGAVQDFLILFISTRRDGRSLGEMAKQELGAFAGVVTMLGALGVMIIILSALALVVVKALANSPWGLFTIAATIPIALFMGIYMRFICPGKIAEVSLIGFVLMMAAIIYGGDIAQHPYWGPFFTLKGTTLTWVLVIYGFIASVLPVWLLLAPRDYLSTFLKIGVIAGLAVGILFAMPEMKMPAVTRFIDGSGPVFSGALFPFLFITIACGAISGFHALVSSGTTPKLIERESHIRFIGYGAMLMESFVAIMALICASVIEPGVYFAMNSPAALIGTTVETASQAINSWGFVVTPEMLTGIARDVGESTILSRAGGAPTFAVGMAHIITEVFNSRVMMAFWYHFAILFEALFILTAVDAGTRACRFMVQDLVGVVVPSMANNRSWLGNMAGTTVAVAGWGFFVYQGVVDPLGGINTLWPLFGIGNQMLASMALILGTVVLFKMKKQRYAWVTILPTVWLFITSMTAGWQKIFHEKPSIGFLAQANKFSKGIDNGIIIAPAKSVADMQTIVFSNQINAALCAFFMLVAVTMLISAFFVIRRALNSATPTTHETAVSLRSEARHV
>NC_014306.1|WP_013202366.1|2656743_2658684_+|exoribonuclease-II
MFQDNPLLAQLKEKLHSQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPFMKKVMHGDRVVAVLQTDKDREVADPEKLIEPFLTRFVGRVQRKDDRLSIVPDHPLMKDAIQCRADRNVTHDFQNGDWAVAEMRRHPLKGDRTFYAELTAFITTADDHLAPWWVTLSRHNLEREAPDATAGEMLDEQLEREDLTALEFVTIDSASTEDMDDALYVEEAADGALRLTIAIADPTAYVAAGSELDAIAAERSFTNYLPGFNIPMLPRQLSDDICSLRPNERRPVLACRVNVAADGTLSEEIHFFAAWIESKAKLAYDNVSDWLESDGASEWQPENDAIAAQIRLLHRLCLARSEWRQTHALVFKDRPDFRFLLGEKGEVLDIVAEHRRIANRIVEEAMITANICAGTVLRQKLGFGIYNIHLGFDAEKAELAATMLENHGLKVDPLAIATLSGFRELRRELDSQPTQFLDSRIRRFQSFAEVSTEPGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAMIKGEEARRPNDDITVKMGERRRQNRMAERDVGDWLYSRFLQSAAGTDQRFGAEVIDVSRGGMRVRLTANGAVAFIPAPFIHAVRDELVCSQENGTVQIKGEVAYRVTDLIEVTIAEVRMENRSVVARPVA
>NC_014306.1|WP_013202365.1|2654316_2656626_+|FdhF/YdeP-family-oxidoreductase
MKFKTEIKPYKAAAGGWGSLEATTRFVFDSKQVLKNMRNLMRMNKAKGFDCPGCAWGDDNKSTFSFCENGAKAVTWEATRRYVDASFFEKYSVSSLYQQSDYFLEYQGRLTEPLRYNRETDHYEPISWDDAFKLIAKYIKAMDNPDQMELYTSGRASNEASWLYQLFGRMNGSNNFPDCSNMCHEASGTGLKRSIGVGKGTIRLDDFDHADAIFVFGQNPGTNHPRMLHSLRHAADHGAKIVTFNTLRERGLERFADPQKPLEVVTSKAGTISSTYYQPNLGGDMAAIRGMVKALSQSHNELIAAGEKGLFDEVFINAKTEGMEEYLAVVEATDWAQIVQQSGLTEQQIREAAAIYQSAERVICTWAMGITQHKHSVDTVREITNLQLLFGQLGKKGAGLCPVRGHSNVQGNRTMGIDEKPSKAFLDSMAAHFGFEPPRNIGHNTVEALEAMLRNEIKVLIALGGNLAAAAPDSPRTEEALRRCELTVQISTKLNRSHLCPGAVDALILPTIGRTEQDIQASGPQFITVEDSFSMVHASEGVGKPIADTQRSETAIVAGIANAVLGNQKLDWLELAADYNKIRDHIAATIPGFADFNQKCDIKGGFYLGNAAAEFRFNTLNNKAQFSSARLPDSLFPQLGDVEVPFTLQTLRSHDQYNTTIYGLDDRYRGVYGQREVLFMHPDDMAKMGLTAGDDVDIETLWNDGIIRKVFNFKLVSYNIPQGNLAAYYPETNPLVPLSSFGDGSGTPTSKSVPVKITLSEAKPGLRIA
>NC_014306.1|WP_013202364.1|2652482_2654075_-|PTS-transporter-subunit-EIIC
MKEFASKIHAFGKALMMPISVIAAAGIFLGVAAAMQNPAITGEAFASLHTPQLIIGFIRKVAGALFANLPLFFAVASAIGLAKAEKPTAAFAAVIGFIAMHVGVSATLGAQGLTAATTTPDALQAKGMAQTAAMMTSAEYIQMLGIFTYNMSVLGGVISGLLTVMIHNRFYTTQLPTAISFFGGRRLVPIITVLVLPLVGVLLAMIWPTIGAGIAWVGELIGKSGQYGAFLYGTSERLLIPTGLHHILNETVRFTPIGGVATVNNETIVGALNIFNTALTHPGSIPDETVQNATKFLAQGKIPVMMFGLPAAALAMYHTARPEHKQRVKALVLAGALTSFTTGITEPLEFCFIFVSPVLYLFHAVLSGLSFMLMSALHLMIGNIQGGAIDLVVFGILGGSKTQWWWAIVLGLIYVPVYYYGFKFVITKMRVETPGRESDEADTAPPKVTADQRTQVIISGLGGEANIEDVDCCFTRLRVRVKEMREVVDQTLMSTGANGVNRVSDHDVQVIYGPQVEKIAHEVKTALGVG
>NC_014306.1|WP_013202363.1|2651372_2652308_-|LysR-family-transcriptional-regulator
MDIKQLTYLVNLERERHFGRAAEASFVSQPTLSMRLKNLEKELGLSLINRSNNFDGFTAEGERVLSWAREIVSVYQGLKLEVESLKHGVKGTLRIGVVPQCSISLPLMLKGISERYPQLDYRVAVLSADQLLDALNSHTVDVGIGFFELATLRELHFQAEPLRDDGVEVVFHPQHFPQLVGDTPLELNDLAEVPLCLAEQTRYFRRYLDTHFREADIRLRVVLETTSIFQLVQGIQVGLGCLISPCGHLLPEMTPELHSRKLAIAPMSRQAAVVIAEPGRATPLAQHFFDEVRRWLSEGQGGRLSAPSLTG
>NC_014306.1|WP_013202362.1|2650220_2651384_+|oxidoreductase
MEQRRFPGNSHWYHETQSTLTPHAAPLFPEAAEIEDRFLLGLAQQYADTLGPTISQCQPAMLASRDLYQLLLPQQLTTSKTHTLTIYDRLSTALTVAQVTGIQRLCNHYAARLNPLSGPDSSRESNRRLTQITEYARQLASQPTLVDNVALARLDEVGLTAPDIVTFHQLIGFVSYQARIVAGMNALLALPVRWIPGVTLPEDAETDCFQHLDAWRPFLPPVELRYASASQLEALTWCQPQELLRDSAWLLAHDGEALYGWGNLLNAMQDVTGTEAGRLASAVSARINGSPLCFQQFADPSLREALLEGVEQALNKAIAEQKAVIHCAAQLTRSPERFSAAHLQPLKEAGFSDRAVFSIVQSIALAAWNNRLMQALGSTAPAVDSAR
>NC_014306.1|WP_013202373.1|2666614_2666989_+|hypothetical-protein
MTHIPSRYLSRALLILAITAMSAGPAYAISAKYRAQLEASGCTQMTDGVSCDIHKTKAQNASRQTQPEEIDAMIGQPISDTAERLLAEGWKPQNGRWYQGDRVLTLTVVDEVVKHARLAQRNDR
>NC_014306.1|WP_013202374.1|2667370_2667589_+|osmotically-inducible-lipoprotein-OsmB
MSMTAKRITAGVLAATLVLSLSACSNWSKRDRNTAIGAGAGAIGGNILSNGSGLGTVGGAAVGGIIGHQISK
>NC_014306.1|WP_013202375.1|2667706_2668033_-|stress-response-translation-initiation-inhibitor-YciH
MADNNSRLVYSTEYGRIDEPKQEVQRPKGDGIVRLQRQTSGRKGKGVCLITGLEMNDAEIEKLAAELKKKCGCGGSVKEGVIEIQGDKRDLLKTLLEAKGLKVKLAGG
>NC_014306.1|WP_013202376.1|2668032_2668749_-|orotidine-5'-phosphate-decarboxylase
MQSLSVTGSPILVALDYNDRAAAMAFVDRIDPQSCRLKVGKEMFTLFGPELVKDLHTRGFDVFLDLKFHDIPNTTAHAVAAAAELGVWMVNVHASGGARMMTAAREALLPFGKDAPQLIAVTVLTSMEASDLKDIGIDVSPADHAERLARLTQQCGLDGVVCSAHEAVRFKQAFGSDFKLVTPGIRPAGSDAGDQRRIMTPQQAQQAGVDYMVIGRPITQSADPQATLKTILASLQEA
>NC_014306.1|WP_013202377.1|2668971_2670141_-|lipopolysaccharide-assembly-protein-LapB
MLELLFLLLPVAAAYGWYMGRRSAQQDKQQEASRLSRDYVAGVNFLLSNQQDKAVDLFLDMLKEDSGTVEAHLTLGNLFRSRGEVDRAIRIHQALMESASLTYDQRLLAVQQLGRDYMAAGFYDRAEEMFSQLVDETDFRVGALQQLLIIHQATSDWPKAIEVAERLVKLGKDKQRMEIAHFYCELALQAMGSDDLDRAMGLLRKGESADRQSARVSIMMGRIHMAKGEYAKAVGHLQRVLEQDKELVSETLEMLETCYQQLDQPNAWAEYLKRCVEENTGAAAELYLSDVIEHDEGGEVAQLYINRQLQRHPTMRVFHRLMDYHLHEAEDGRAKESLMVLRDMVGEQIRTKPRYRCHKCGFTAHALYWHCPSCRAWSSVKPIRGLDGQ
>NC_014306.1|WP_013202378.1|2670147_2670456_-|LapA-family-protein
MKYLLIFLLVLVIFIISITLGAHNDQVVSFNYLLAQGEYRVSTLLAVLFAAGFLLGWAICGLFWLRVRVSLGHTQRKLKRLQQQLGQAEETVTVSQVPAVKE
>NC_014306.1|WP_013202379.1|2670599_2671361_-|phosphatidylglycerophosphatase-B
MREIALRTTLGALILLIMPAAVWLSGWHWQPVEMGIGYKMLFWLTETVTSPWGTLTSAVLCGWFLWCLRFRFKPALLLLVIVISAILVGQYAKSFIKEQVQEPRPYVLWLEHSNGLDEKTFYEQKRPERSTLVRNALFNNTQLPDWLKQHWEFETGYAFPSGHTMFAASWALLGIGLLWPRRRIVTVVILVAWAVGVMGSRLALGMHWPQDLITATAISWALVTLATWLVQRYCGPLTVPPQEEQEIQQRDAE
>NC_014306.1|WP_013202380.1|2671591_2672185_+|GTP-cyclohydrolase-II
MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDITNSDAVLARVHSECLTGDALFSLRCDCGFQLEAALNHIAEEGRGVLLYHRQEGRNIGLLNKIRAYALQDKGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPRKVEILSEAGINIVERVPLIVGRNPENAHYLDTKAAKMGHLLSKD
>NC_014306.1|WP_013202381.1|2672253_2674938_-|aconitate-hydratase-AcnA
MSSTLHNKARTTLDVKGQRYSYYSLPRAAEQLGDLTRLPKSLKVLMENLLRWQDEDSVTEADIVALAGWLKQAHADREIAYRPARVLMQDFTGVPAVVDLAAMREAVKRLGGDVAKVNPLSPVDLVIDHSVTVDRFGDDDAFEENVRLEMERNHERYVFLRWGQKAFNKFSVVPPGTGICHQVNLEYLGKAVWHEQQDGEELAYPDTLVGTDSHTTMINALGVLGWGVGGIEAEAAMLGQPVSMLIPDVVGFKLTGKLKPGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDDLPLADRATIANMAPEYGATCGFFPVDAVTLGYMTLTGRSSEQVSLVEAYAKAQGMWRNPGDEPVFTSSLALDMNEVEASLAGPKRPQDRVALGDVPKAFQASNELEINQSQKQHKAITYTDSKTGLQQTLKDGAVVISAITSCTNTSNPSVLMAAGLLAKKAVSLGLKRQPWAKASLAPGSKVVSDYLATAGLTTYLDQLGFNLVGYGCTTCIGNSGPLPDEVETAIKQGDLTVGAVLSGNRNFEGRIHPYVKTNWLASPPLVVAYALAGNMNINLQQDPIGQDKAGNPVYLKDIWPSPEEIAEAVQLVSTDMFHKEYAEVFEGTPEWQQIKVSEAATYDWDEGSTYIRLSPFFDHMGKVPDPVKDIKGARILAMLGDSVTTDHISPAGSIKAESPAGRYLLDHGVERNDFNSYGSRRGNHEVMMRGTFANIRIRNEMVPGVEGGVTRFVPGDEQLAIYDAAMKYQQQGTPLAVIAGKEYGSGSSRDWAAKGPRLLGVRVVISESFERIHRSNLIGMGILPLEFPQGVTRKTLGLTGDEWIDVENLTQLKPGGTVNVTLTYADGRKEVLETRCRIDTGNELTYYKNDGILHYVIRNMLDA
>NC_014306.1|WP_013202384.1|2675601_2675760_-|YmiA-family-putative-membrane-protein
MNTKLTVQPVFGHKTMKVQRSANMKRKAWLAVFAGSAVFWIAAAFMIWRVWG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_014306_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014306_3

3306662-3306748

Orphan

Consensus_repeat	Method
GCTGAGCGTTAGCAAGTTGTCTGGCTGATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_014306_3

>merge|NC_014306|3|3306662-3306748|CRISPRCasFinder
GCTGAGCGTTAGCAAGTTGTCTGGCTGATCGGGTGGTCTGCTCAGGGAGATTTGACTGCTGAGCGTTAGCAAGTTGTCTTGCTGATC

>NC_014306|3|3|3306662-3306748|CRISPRCasFinder
GCTGAGCGTTAGCAAGTTGTCTGGCTGATC	GGGTGGTCTGCTCAGGGAGATTTGACT
GCTGAGCGTTAGCAAGTTGTCTTGCTGATC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014306.1\|WP_013202986.1\|3316539_3318417_-\|potassium-transporter-Kup	unknown	unknown	gnl\|CDD\|225700
NC_014306.1\|WP_013202972.1\|3300203_3301610_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|182502
NC_014306.1\|WP_013202987.1\|3318567_3318813_+\|hypothetical-protein	unknown	unknown	unknown
NC_014306.1\|WP_013202977.1\|3307605_3308616_+\|Zn-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182229
NC_014306.1\|WP_013202985.1\|3315534_3316320_-\|hydroxyethylthiazole-kinase	unknown	unknown	gnl\|CDD\|236477
NC_014306.1\|WP_013202981.1\|3311555_3312245_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NC_014306.1\|WP_013202989.1\|3319298_3320411_-\|iron-sulfur-cluster-carrier-protein-ApbC	unknown	unknown	gnl\|CDD\|183270
NC_014306.1\|WP_013202976.1\|3305701_3306601_+\|lipid-kinase-YegS	unknown	unknown	gnl\|CDD\|237281
NC_014306.1\|WP_013202970.1\|3294022_3297142_+\|MdtB/MuxB-family-multidrug-efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|182501
NC_014306.1\|WP_013202975.1\|3304012_3305407_+\|tRNA-5-hydroxyuridine-modification-protein-YegQ	unknown	unknown	gnl\|CDD\|237969
NC_014306.1\|WP_013202971.1\|3297138_3300207_+\|multidrug-efflux-RND-transporter-permease-subunit-MdtC	unknown	unknown	gnl\|CDD\|182589
NC_014306.1\|WP_013202982.1\|3312239_3314285_-\|FUSC-family-protein	unknown	unknown	gnl\|CDD\|377393
NC_014306.1\|WP_013202974.1\|3303031_3303739_+\|two-component-system-response-regulator-BaeR	unknown	unknown	gnl\|CDD\|182665
NC_014306.1\|WP_013202978.1\|3308685_3309969_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NC_014306.1\|WP_013202969.1\|3292775_3294023_+\|MdtA/MuxA-family-multidrug-efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|183194
NC_014306.1\|WP_013202988.1\|3318840_3319263_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NC_014306.1\|WP_013202984.1\|3314737_3315538_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|180561
NC_014306.1\|WP_013202967.1\|3290219_3291572_+\|molecular-chaperone	unknown	unknown	gnl\|CDD\|236954
NC_014306.1\|WP_013202973.1\|3301609_3302995_+\|two-component-system-sensor-histidine-kinase-BaeS	unknown	unknown	gnl\|CDD\|182539
NC_014306.1\|WP_041692065.1\|3291574_3292537_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381307

Protein	Function_ID	Function_description	E-value
NC_014306.1\|WP_013202986.1\|3316539_3318417_-\|potassium-transporter-Kup	gnl\|CDD\|225700	COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism].	0
NC_014306.1\|WP_013202972.1\|3300203_3301610_+\|MFS-transporter	gnl\|CDD\|182502	PRK10504, PRK10504, putative transporter; Provisional.	0
NC_014306.1\|WP_013202977.1\|3307605_3308616_+\|Zn-dependent-oxidoreductase	gnl\|CDD\|182229	PRK10083, PRK10083, putative oxidoreductase; Provisional.	0
NC_014306.1\|WP_013202985.1\|3315534_3316320_-\|hydroxyethylthiazole-kinase	gnl\|CDD\|236477	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated.	2.1605e-113
NC_014306.1\|WP_013202981.1\|3311555_3312245_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	2.54729e-48
NC_014306.1\|WP_013202989.1\|3319298_3320411_-\|iron-sulfur-cluster-carrier-protein-ApbC	gnl\|CDD\|183270	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC.	0
NC_014306.1\|WP_013202976.1\|3305701_3306601_+\|lipid-kinase-YegS	gnl\|CDD\|237281	PRK13054, PRK13054, lipid kinase; Reviewed.	0
NC_014306.1\|WP_013202970.1\|3294022_3297142_+\|MdtB/MuxB-family-multidrug-efflux-RND-transporter-permease-subunit	gnl\|CDD\|182501	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit.	0
NC_014306.1\|WP_013202975.1\|3304012_3305407_+\|tRNA-5-hydroxyuridine-modification-protein-YegQ	gnl\|CDD\|237969	PRK15452, PRK15452, putative protease; Provisional.	0
NC_014306.1\|WP_013202971.1\|3297138_3300207_+\|multidrug-efflux-RND-transporter-permease-subunit-MdtC	gnl\|CDD\|182589	PRK10614, PRK10614, multidrug efflux system subunit MdtC; Provisional.	0
NC_014306.1\|WP_013202982.1\|3312239_3314285_-\|FUSC-family-protein	gnl\|CDD\|377393	pfam04632, FUSC, Fusaric acid resistance protein family. This family includes a conserved region found in two proteins associated with fusaric acid resistance, FusC from Burkholderia cepacia and fdt-2 from Klebsiella oxytoca. These proteins are likely to be membrane transporter proteins.	1.28759e-113
NC_014306.1\|WP_013202974.1\|3303031_3303739_+\|two-component-system-response-regulator-BaeR	gnl\|CDD\|182665	PRK10710, PRK10710, DNA-binding transcriptional regulator BaeR; Provisional.	1.53462e-174
NC_014306.1\|WP_013202978.1\|3308685_3309969_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.35853e-91
NC_014306.1\|WP_013202969.1\|3292775_3294023_+\|MdtA/MuxA-family-multidrug-efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|183194	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit.	0
NC_014306.1\|WP_013202988.1\|3318840_3319263_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	8.01928e-16
NC_014306.1\|WP_013202984.1\|3314737_3315538_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	2.62693e-160
NC_014306.1\|WP_013202967.1\|3290219_3291572_+\|molecular-chaperone	gnl\|CDD\|236954	PRK11678, PRK11678, putative chaperone; Provisional.	0
NC_014306.1\|WP_013202973.1\|3301609_3302995_+\|two-component-system-sensor-histidine-kinase-BaeS	gnl\|CDD\|182539	PRK10549, PRK10549, two-component system sensor histidine kinase BaeS.	0
NC_014306.1\|WP_041692065.1\|3291574_3292537_-\|aldo/keto-reductase	gnl\|CDD\|381307	cd19081, AKR_AKR9C1, AKR9C family of aldo-keto reductase (AKR). Haloferax volcanii aldo-keto reductase is a founding member of aldo-keto reductase family 9 member C1 (AKR9C1).	2.85431e-175

>NC_014306.1|WP_013202976.1|3305701_3306601_+|lipid-kinase-YegS
MEQPITLVILNGKGAGNEDLREAIFTLRKEGYPIEIRVTWEHGDGERYVREAVAIQAETVVAGGGDGTINEIATALAKLDASQRPVLGIIPLGTANDFATSAGIPQEMENALRLAIVGKATPIDLARVNQTHYFINMATGGFGTRITTETPEKLKSALGGVSYFIHGLMRMDTLKADSCELSGPDFRWDGDALVIGIGNGRQAGGGQRLCPAALINDGKIEVSIVTSKEILPTLLNSVIGGDDDNPNIIRASLPWLDITAPHEMTFNLDGEPLSGKSFHIEVMPAAIACRLPPSCELLA
>NC_014306.1|WP_013202975.1|3304012_3305407_+|tRNA-5-hydroxyuridine-modification-protein-YegQ
MKPELLSPAGTLKNMRFAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGINEAHALGKKFYVVVNIAPHNAKLKTFIRDLRPVIEMGPDALIMSDPGLIMLVRDAFPQMDVHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIAEIREQVPEMELEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYKVQEGKVDDVGQIVQQYQPIPVKTVEPTLGAGQPTDKVYLIEEAMRPGEQMTAFEDEHGTYIMNSKDLRAVAHVGRLTQMGVHSLKIEGRTKSHYYCARTAQVYRRAIDDAAAGKPFDESLLGTLDGLAHRGYTEGFLRRHTHDSYQNYDYGHSASDRQQFVGEFTGERRGDKVLVEVKNKFSVGDNLELMTPAGNVNFDLPEMVNTKLQPTLVAPGNGHFVWISVPEDIDLTFALLMRNFPDASAEPAIDAVGSTAYADPAAR
>NC_014306.1|WP_013202974.1|3303031_3303739_+|two-component-system-response-regulator-BaeR
MEQETLAPLILVVEDEPKLGQLMVDYLQAANYRTHHLLRGDEVLDWVKQTPPDMILLDLMLPGMDGLTVCREIRRFSDLPIMMVTAKTEEIDRLLGLEIGADDYICKPFSPREVVARVKTILKRCKRTPEEAQKASLLVIDENRFQASWDQGPLDLTPAEFRLLKTLAQEPGKVFSREMLLNHLYDDYRVVTDRTIDSHIKNLRRKLELLDSDQPFIRAVYGMGYRWEADVCRLI
>NC_014306.1|WP_013202973.1|3301609_3302995_+|two-component-system-sensor-histidine-kinase-BaeS
MFAKLRIGITAKLFAAIFSTCLLVLVTMHWGVRLSFEHGFIDYIKKGNEQRLVMLSDALSDQYEQHGNWDFLRHNNKLVFQILHSLEQNPDSNSQLPPHGWRTQFWIIDQQYHVMIGPRGPVPPEGSRRNITTSDGHIVGWVIGSPPERLTRSADINFDQQQKRTSWIISGLAMLLAALVTWLMSRGLLAPVKRLVEGTHQLAAGDFTSRVQANSRDELGRLGQDFNRLASTLEKNESMRRAFMADISHELRTPLAILRGELEAIQDGVRKLTPESIVSLQGEVSTLTKLVDDVHQLSLSDEGALAYRKCKTDLVPLVELVASNFNGRYQSRNLSLDLRLPEQAPLFGDPDRLMQLFTNLMENSLRYTDAGGGLTVTLVSQADQQILHFEDTSPGITDEQRQQIFERFFRAESSRNRASGGSGLGLAICQNIVEAHDGSIVADHSDAGGLKITVHLPCNTN
>NC_014306.1|WP_013202972.1|3300203_3301610_+|MFS-transporter
MNTLPSTVRWQLWIVAFGFFMQALDTTIVNTALPSMAVSLNENPLNMHSVIVSYVLTVAVMLPVSGWLADRFGVRNVFFSAIILFSVGSLFCSMASSLDQLIMARVVQGIGGAMMVPVGRLTVMKLVPREQYMAAMTFVTLPGQVGPLLGPALGGVLVQYASWHWIFLINIPVGIIGAIATLMLMKNMSLPPRKFDFLGFILLAAGMATLTLALDGQRGLGVSPLLLCLFILIGVFSLLFYLMHARGNERALFSLKLFDNRIYSIGLLGSFTGRIGSGMLPFMTPIFLQVGMGYTPFHAGLMMIPMVLGNMGMKRIVVQIVNRFGYRNVLVGATIGLALVVLLFPAVALMGWDYLLPVVLFLQGMVNAIRFSSMNTLTLKELPDDLASSGNSLLSMIMQLSMSIGVTVAGLMLGTFGHQAVTDSAAVHQAFIYTYLCMAVVIVLPALVFWRVPLDVSKNVVLSRKRKS
>NC_014306.1|WP_013202971.1|3297138_3300207_+|multidrug-efflux-RND-transporter-permease-subunit-MdtC
MRFFALFIHRPVATILLTIAILLAGVLGFRLLPVAPLPQVDFPVIVISASLPGASPETMASSVATPLERSLGRIAGVSEMTSTSSLGSTRIILVFDYDRDINGAARDVQGAINGAQSLLPTGMPSRPTYRKANPSDAPIMIMALTSDTYSQGQLYDYASTQLAQKLSQIDGVGDVTVGGSSLPAVRVDLNPQALFNQGVSLDAIRETIANANQRRPQGAIEDHQQRWQLKTNDELQKAADYQPLVVHYNAGAAVRLQDVANVTDSVQDVRNAGMSNAKPAILLLIRKLPEANIIDTVDRIRAEVPELSNIIPASIHLEIAQDRSPTIRASLAEVEQSLAISVGLVILVVFAFLRSGRATLIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTVATGFVVDDAIVVLENISRHVEAGMKPLQASLQGVREVGFTVLSMSLSLIAVFLPLLMLGGLIGRFFKEFAVTLSVSIAISLVISLTLTPMMCARLLRAHPQREQGRVRGFGRVLNAIQQGYGRSLNWVLNHSRWTLLVFLATIGLTVYLYISIPKTFMPEQDTGRVMGFIQADQSISFQAMRGKLEGFMKIVRDDPAVESVVGFTGGSRTNSGSMFISLKPLSERSENAQEVIARLRIKLAKEPGASLYLMAVQDLRVGGRESNAGYQYTLLSDNLDDLRIWEPKIREAFAALPELADVNSDQQDKGSEMALTYDRETMTRLGIDVTDANNLLNNAFGQRQISTIYQPLNQYKVVMEVDPRYTQDISSLDLMYLINNDGKAIPLSYFAKWLPANAPLSVNHQGLSAASTISFNLPEGVSLSQASDAIDRSMTTLGVPTSVRGSFAGTAQAFEQSQNSQVWLIIAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFSAPFSLIALIGILLLIGIVKKNAIMMVDFALEAQRNGNLTAREAIFQASLLRFRPIMMTTLAALLGALPLVLTSGDGAELRQPLGITIVGGLVMSQLLTLYTTPVVYLYMDKLRRRPRQELVQS
>NC_014306.1|WP_013202970.1|3294022_3297142_+|MdtB/MuxB-family-multidrug-efflux-RND-transporter-permease-subunit
MQVMPPSSTGGPSRQFILRPVATTLLMVAILLAGILGYRALPVSALPEVDYPTIQVVTLYPGASPDVVTSSITAPLERQFGQMSGLKQMSSQSSGGASVVTLQFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTTTSMPMTQVEDMVETRVAQKISQVSGVGLVTLAGGQRPAVRVKLNAQALAALNLDSETVRTAIANANVNSAKGSLDGPERSITLSANDQMKSAEDYRQLIVAYQNGSAVRLRDVATVEQGAENSWLGAWANRQPAIVLNIQRQPGANIITTADSIRQMLPSLTASLPKSVEVKVLTDRTTNIRASVHDVQFELMLAIALVVMIIYLFLRNVPATIIPAVAVPLSLVGTFAVIYFLGFSINNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPMAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAVTLAISILISAVVSLTLTPMMCARMLSVESLRKQNRFSRASEAMFDRIIAGYGHFLRRVLNHPWITLGVALGTLAITVLLWITIPKGFFPVQDNGIIQGTLQAPQSVSYANMAQRQQQVASIIMKDPAVQSLTSFVGVDGTNPALNSGRLQINLKPLDQRDDRIPVVIDRLQTEIAKLPGVNLYLQPVQDLTIDTTVSRTQYQFTLQAGSLESLSLWVPKLITALSTLPELKDVSSDWQDQGLEAYIKVDRDNASRLGITMADVDNALYNAFGQRLISTIYTQANQYRVVLEHDTSATPGLAALDGIRLNSTSGGMVPLSAIATVEQRHGALSINHLDQFPSTTFSFNVRDGYSLEQAVNAISKTEQDLAMPSEIMTEFQGSTLAFQAALSSTIWLIVAAIVAMYIVLGVLYESFIHPITILSTLPTAGVGALLALMLSGHELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMAPYDAIYQACLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGVAMVGGLVVSQVLTLFTTPVIYLLFDRLAHATRRRFRQEEAQ
>NC_014306.1|WP_013202969.1|3292775_3294023_+|MdtA/MuxA-family-multidrug-efflux-RND-transporter-periplasmic-adaptor-subunit
MTAQRRSLKILPILIIAAVAAGGWYWWHSSHSSAAPEKTADAQQHKGGEGKSGGRHGGTAALSPVQAAEAVRQSVPQYLSGLGTVTAANTVTLRSRVDGDLMALHFTEGQEVKAGQLIAEIDPRPYQVALTQAQGQLAKDQATLANARRDLARYEKLAKTNLVSQQEMDTQRSLVSETLGTIKADEGSVASAQLNLTYSRVTSPISGRVGLKQVDVGNYITSGDTTGIVVITQTHPIDLVFSLPENDISTILMAQKGGQPIPVEAWDRSNKKLLTSGTLLSMDNQIDATTGTVKLKARFGNNDDMLFPNQFVNARLKVNTLQDAIVIPAAALQMGNEGNFVWVVNAEDKVSKKLITTGLQDSQKVVVTAGLDAGERVVTDGIDRLTEGTKVEVVAPQATPLTSGKSALPSKGASS
>NC_014306.1|WP_041692065.1|3291574_3292537_-|aldo/keto-reductase
MSQSEHRSLGRTGIQVPTLTFGGNVFGWTVDQKTSFSLLDALVEKGLYFIDTADVYSRWAPGNEGGESETIIGNWLKQSGKRDKIVLATKVGIEMGPGKTGLSPKYIRQAIEDSLRRLQTDSIDLYQAHSDDSDTPLQETLATFDALIKEGKVRAIGASNYSAERLSEALKVSEDNGFARYETLQPEYNLYDREGYESGLEQVAKDNGLAVINYYSLASGFLSGKYRKPEDASKSQRGAGVVEKYLNERGLRIIKALDQVAESTGSTPTQVALAWQIARPSITAPIVSVTSLTQLDELTKAAALKLSDDDIRELSEASSY
>NC_014306.1|WP_013202967.1|3290219_3291572_+|molecular-chaperone
MFIGFDYGTANCSVAIMKDGVPALLPLEQGSTLLPSMLCAPTRDAVSEWLFRHHQVPTPEADNQAILRRALAFNREEDIEVTPNSVQFGLASLAQYMADPEDVWFVKSPKSFLGANGLKPQQVAFFEDLVCAMMLHIRQKAEQNLNQSITQAVIGRPINFQGLGGDEANRQAQGILARAASRAGFKDVEFQFEPVAAGLEFEATLKQETRVLVVDIGGGTTDCSMLLMGPEWHDKSDRSASLLGHSGCRVGGNDLDIMLAFKELMPLLGLGGATEKGTALPALPWWNAVAINDVPAQSDFYATASKKLLLDLIRDTREPEKVKRLLKVWQQRLGYRLVRAAEESKIALSEQANVTTQLAFIEQSLETAISVQGLEAAIAQPLERIQEQVKMALDASGTRPDVIYLTGGSARSPVLRQALQQQLPDIPLASGDDFGSVTAGLARWAQVMFR
>NC_014306.1|WP_013202977.1|3307605_3308616_+|Zn-dependent-oxidoreductase
MKSIVIERPGELQVQDRPELTPAAGEVRVKVQYASICGSDVHIWHGHNPFARYPRVIGHEFFGRIDAVGEGVDAARIGQRVAVDPVVSCGHCYPCSIGRPNVCSELQVIGVHRDGGFSEYAVAPAANAYTLPESIPDKLASLVEPFTIAANITAFLKPQPDDVALIFGSGPMGLTAIQVLKGVYKVRKVIVADRLPERLAMAKANGADVVLNNSEIPLAAQLEGEMPTLIIDAACHPAILAEAAALASPAGRIGLLGFSGEACSITQQSLTSKELSLFTSRLNSHRFPEVISWMEQGLIQPEKLVTHYFPLAEIEHAMTLFEKDPRSCCKVILAVE
>NC_014306.1|WP_013202978.1|3308685_3309969_+|MFS-transporter
MFKNLRWTIVLLLFMVYMINYLDRVALSLTVPMIEKDLMLNAEQFGLIFGSFFFGYAIFNFIGGLATDKFGPTIVMGVAVGLWSLFCGLTAVATGFWSMLILRVLFGMAEGPICASANKAINGWFPKKQAATAMGFLSAGSPLGGAVAGPIIGYLALAFGWRPAFIIICSVGIVWMVVWFLIASDNPLKSRRVSQDERALIAKLKEEQTTPEDELAQAAHGLGYYLRQPIILVTAFAFFCYNYILFFFLSWFPAYLVQAHNLDIKSMSITTMIPWIVGFVGLALGGLISDKIFKITGKLLLSRKIVLVVSLLAAAICVALAGSVKGTYPAVALMSVSIFFLYITGAIYWAIIQDVVHKSRVGGISGFIHLIGSLSGIVGPIVTGYIVHHTGKFDSAFVLAGAVAALGAVLVFFVIKSPKTQNKAVSV
>NC_014306.1|WP_013202981.1|3311555_3312245_+|GntR-family-transcriptional-regulator
MSTAYIITANEPVNQQIYRFLRQDIVTCAIPPGSLLSEKEVSSRFSVSRQPVREAFIKLAEAGLVQVLPQRGTFVRKISAKRVADGRFIREAVEVAVIRRAAVEASAESLAQLEHNLQLQKMAAERHDSQAFLLLDDEFHRLIAQSINCELSWETVENIKAAMDRVRFLTLSKVSPPESLIQQHQEIYQALVAKDVDGAEHALRRHLQEMIFSITPIAEQNSEWFEKPL
>NC_014306.1|WP_013202982.1|3312239_3314285_-|FUSC-family-protein
MKWLSKNAWLFAVKTCIAAFIALYIALKLNLDKPAWAMVSVYVISQLYSASTLSKALFRFLGTVLGGIFIFLIYPITVTHPMLFSLCVSLWVACCLYLSLHDRTPKSYVFMLAGYSAAIMGFADVTTPLSITYTVISRIEEITVAIICSSLVHMLVFPVRMRNLLENSVSNWFDTAKNVCTELLTIESKESSPERDQILVQMANYPVAVETLITHCVYEGDSARKLIRLVSAQYQHLSYLIPTLTAIEKRLSLLAEQGITFPDFVAESFSHFLVWLNSPEQSGQAQSIEADITASQERIKALYGRGEMNAEEGLLLIGLLERLLNFIRIADSYFNARERVSQLSPEKKRGRLKLIRKHRDKGLILLSAFTAFTATMIGCIFWIGTGWKDGASTPMIAAVVCSFFAAMDSPIASMKVFLKGVLIAIVISVLYVGLLIPMTVTFESLIICLAPGLLALGLVIANPSTNFIGLIIATQIPGFIGMTHDLQPDLLSILNASISTVVGILLAVLVTAIIRNRRPAWSARRVLRKGIKELLQFTGEIKINASSLLSRQQYVASMIDKINVILPRNRIDPSPGVALGGNLITEIWLGVNCYDFYARHQAIIKDHQLETDAVMFEINQYFKKRLKDIHLEPPQSLLMELNQLLVKTEALCRADMALFRPLFYLFNIRMALYPTQRWPAL
>NC_014306.1|WP_013202984.1|3314737_3315538_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MKRINALSIAGTDPSGGAGIQADLKTFSALGAYGTTVITALVAQNTCGVQSVYRIEPDFVAAQLHSVLSDVRIDSVKIGMLASSDIVKVVAEGLKASSVPWIVLDTVMLAKSGDPLLSPTAVATLRECLLPHVSLITPNLPEAAALLECPVATNEDEMRRQGRALLALGCQAVLMKGGHLSDAESPDWLFSRQLEQRFTAPRVPTKHTHGTGCTLSAALAALRPRHDNWVSTVQDAKGWLQGALEQADSLEVGKGIGPVHHFHRWW
>NC_014306.1|WP_013202985.1|3315534_3316320_-|hydroxyethylthiazole-kinase
MNQPHTFVAADAVASLHLFREKSPLIHCLTNDVVQTFTANVLLALGASPAMVIDPDEAAQFSAIADAVLVNVGTLTHSRSTAMLAAVHAAGKAQRAWTLDPVAVGALTFRTEFCQQLLEHRPAAIRGNASEIMALARQATSGRGVDSLHDSALALDAARLLASTTGAIVAVTGETDYVTDGQRVLAVAGGSPLMTRVVGTGCALSAVVAGFAALPGDRLTHVASACRIMSLAGERAAMAAAGPGSFVALFLDELFTLEVQG
>NC_014306.1|WP_013202986.1|3316539_3318417_-|potassium-transporter-Kup
MTASQDTQENTLSLPVLAAGALGVVFGDIGTSPLYTLKTVLSLSGEGPTPEVILGLLSLLFWTMVMITSVKYALFAMRIDNHGEGGILALMSLLVRKDKRRPLVLFAGLFGAALIYGDGAITPAISVLSALEGLTIILPESQPWILPGAVVILLALFAIQPLGTAKIGKVFGPIMALWFAVIAGLGIWGIVQHPAVLVALNPMYGIDFLFSNGIVSFLVLGGVFLCVTGAEALYADMGHFGKKPIWLAWFAIVFPSLLLNYAGQAALLLSGADVTQNIFFRLCPPVLQIPLVILATLATIIASQAIISGAFSMTRQAIQLGWLPRLRVKQTTEESYGQIYIGAINWLLMVVTIFLAVFFKSSDKLAAAYGIAVSLTMIMTSGLLYVAMHEVWRWNRLTSLLIAGVFFVIDLCFLVANMSKVFEGGYMPLILALVVYGVMLLWHRGVEAASRAVHEKFISVDDFLAMLEEKAIPRVPGTAVFLTREKEGTPPVMQWQVKRNGSLHGHVLSLTIAIDNVPRINADERLTVTQLAPGFWHALAVYGFMERPNIPALLRYPQLDNCELDTEDVTYYLGHENIIPREGSGGLPAWQRVIFSWMARNGMHVTDYYYLPSDRVVEIGRRIPV
>NC_014306.1|WP_013202987.1|3318567_3318813_+|hypothetical-protein
MTRPLNEQYGISVAALKMLQYLKQISRGDRGFSILDTTLNHRCNVTPPDNFKVLDELFEAGKIDYDYRGTGLDGERHVKPV
>NC_014306.1|WP_013202988.1|3318840_3319263_+|GNAT-family-N-acetyltransferase
MNVRPFTEADRPFLRTLFLASRKANWHWLDGSDWALEDFDRVTLGERILVAEDNGHRLGFAAVLPNDNFLHSLFIDPDWQGKHVGSLLLTAVQAAFTSTGALKCMKANHHAVAFYQRHGWTIISDGESEHGEYWLMHFVR
>NC_014306.1|WP_013202989.1|3319298_3320411_-|iron-sulfur-cluster-carrier-protein-ApbC
MTVQAQGQHSPEALRAMVMGTLTTFEHPTLKHNLTTLKALHHCALMDNTLHIDLVMPFAWHSGFEALKESASAELLRLTSATAISWRLTHDIATLKRVKNHPGATGVKNIIAVSSGKGGVGKSSTAVNMALALAAEGAKVGLLDADIYGPSIPDMLGTRDERPTSPDGTHMAPIMAHGLATNSIGYLVTDDNAMVWRGPMASKALMQLLNETMWPDLDYLVLDMPPGTGDIQLTLAQNVPVTGAVVVTTPQDIALVDARKGIVMFEKVNVPVLGIVENMSMHICSNCGHHEAIFGSGGAEKLAEQYHTRLLAQLPLHITLREDLDDGQPTVVRRPDSEFTAMYRQLAGAVAAQLYWQGEVIPADIAFRAV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

103027 : 166895

Salmonella_phage(57.14%)

tail,protease,integrase,capsid,terminase,tRNA,head,portal,plate

attL 103919:103935|attR 120997:121013

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013200127.1\|103027_103501_-\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_013200128.1\|103544_104921_-	envelope stress sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	5.0e-16	26.1
103919:103935	attL	NA	NA	NA	NA
WP_013200129.1\|104917_105616_-	envelope stress response regulator transcription factor CpxR	Q6XM27	Feldmannia_irregularis_virus	1.4e-06	29.4
WP_013200130.1\|105766_106276_+	Spy/CpxP family protein refolding chaperone	NA	NA	NA	NA
WP_013200131.1\|106493_107501_-\|integrase	tyrosine-type recombinase/integrase	A0A0M4RTQ0	Salmonella_phage	2.5e-105	59.7
WP_041691842.1\|107583_107883_-	helix-turn-helix domain-containing protein	Q1JS45	Enterobacteria_phage	4.4e-18	51.8
WP_041692175.1\|107905_108208_-	helix-turn-helix transcriptional regulator	Q1JS45	Enterobacteria_phage	8.3e-17	58.3
WP_013200132.1\|108342_108621_+	hypothetical protein	Q1JS44	Enterobacteria_phage	6.4e-24	60.8
WP_041691844.1\|109027_109288_+	hypothetical protein	NA	NA	NA	NA
WP_013200134.1\|109370_109817_+	hypothetical protein	NA	NA	NA	NA
WP_013200135.1\|109890_110121_+	DUF2732 domain-containing protein	A0A0M3UL87	Salmonella_phage	3.8e-06	42.1
WP_013200136.1\|110120_110348_+	TraR/DksA family transcriptional regulator	NA	NA	NA	NA
WP_041691845.1\|110344_111157_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	E5G6L8	Salmonella_phage	8.9e-82	58.1
WP_013200138.1\|111347_111620_-	hypothetical protein	NA	NA	NA	NA
WP_157868000.1\|111709_114097_+	replication endonuclease	A0A0M4RTM8	Salmonella_phage	5.3e-199	53.9
WP_041691846.1\|114391_115210_-	hypothetical protein	NA	NA	NA	NA
WP_041691847.1\|115922_116234_+	hypothetical protein	NA	NA	NA	NA
WP_013200140.1\|116412_117411_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_041691848.1\|117413_118058_+	hypothetical protein	NA	NA	NA	NA
WP_013200141.1\|118450_119521_-\|portal	phage portal protein	A0A0M5M1H6	Salmonella_phage	1.4e-143	72.0
WP_041691849.1\|119524_121237_-	oxidoreductase	A0A0M4S6K7	Salmonella_phage	6.2e-226	70.6
120997:121013	attR	NA	NA	NA	NA
WP_013200143.1\|121386_122223_+\|capsid	GPO family capsid scaffolding protein	A0A1J0I2E9	Salmonella_phage	1.2e-78	55.9
WP_013200144.1\|122252_123302_+\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	1.4e-132	68.3
WP_013200145.1\|123349_124300_+\|terminase	phage terminase/endonuclease subunit	A0A0M4R523	Salmonella_phage	1.5e-64	54.6
WP_013200146.1\|124397_124892_+\|head	head completion/stabilization protein	A0A0M4QWR7	Salmonella_phage	3.3e-39	54.3
WP_013200147.1\|124891_125095_+\|tail	tail protein X	A0A0A7NV57	Enterobacteria_phage	2.9e-13	57.6
WP_013200148.1\|125085_125379_+	hypothetical protein	NA	NA	NA	NA
WP_013200149.1\|125375_125921_+	lysozyme	Q19UR6	Mannheimia_phage	4.8e-47	50.8
WP_013200150.1\|125920_126340_+	hypothetical protein	NA	NA	NA	NA
WP_041691850.1\|126459_126948_+\|tail	phage tail protein	E5E3V9	Burkholderia_phage	5.3e-21	37.8
WP_013200153.1\|126947_127592_+	phage virion morphogenesis protein	A0A0M4RCU1	Salmonella_phage	3.9e-48	49.8
WP_013200154.1\|127588_128143_+\|plate	phage baseplate assembly protein V	A0A0M3ULA5	Salmonella_phage	1.1e-43	48.0
WP_013200155.1\|128160_128484_+	GPW/gp25 family protein	A0A0M4S6L5	Salmonella_phage	1.6e-21	50.9
WP_013200156.1\|128480_129392_+\|plate	baseplate J/gp47 family protein	F1BUP3	Erwinia_phage	9.6e-109	71.6
WP_013200157.1\|129384_129990_+\|tail	phage tail protein I	E5G6N9	Salmonella_phage	7.3e-81	71.0
WP_013200158.1\|129986_131102_+\|tail	phage tail protein	A0A2I8TVA9	Erwinia_phage	2.9e-99	56.1
WP_013200159.1\|131101_131692_+\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	2.0e-43	45.2
WP_013200160.1\|131725_132157_-\|tail	phage tail protein	A0A1J0I2L5	Salmonella_phage	3.4e-48	63.6
WP_013200161.1\|132163_135355_-\|tail	phage tail tape measure protein	A0A0M4R2V3	Salmonella_phage	1.8e-157	38.9
WP_071822135.1\|135351_135468_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_013200162.1\|135500_135800_-\|tail	phage tail protein	A0A0M4RCV2	Salmonella_phage	7.0e-16	56.0
WP_013200163.1\|135861_136374_-\|tail	phage major tail tube protein	A0A0M5M1I5	Salmonella_phage	1.4e-56	62.0
WP_013200164.1\|136384_137572_-\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A0M4S6M1	Salmonella_phage	3.0e-163	71.3
WP_157868044.1\|137700_138831_+	phage late control D family protein	A0A0A7NQ97	Enterobacteria_phage	7.4e-127	63.8
WP_013200166.1\|138891_139131_+	ogr/Delta-like zinc finger family protein	Q37973	Salmonella_virus	3.4e-05	39.7
WP_013200167.1\|139239_139539_+	NINE protein	M4ZS56	Bacillus_phage	8.2e-17	71.9
WP_013200168.1\|139752_140655_+	CDF family cation-efflux transporter FieF	NA	NA	NA	NA
WP_013200169.1\|140862_141825_+	6-phosphofructokinase	NA	NA	NA	NA
WP_013200170.1\|141969_142962_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_013200171.1\|143182_143941_+	CDP-diacylglycerol diphosphatase	NA	NA	NA	NA
WP_013200172.1\|143972_144974_-	inner membrane protein YhjD	NA	NA	NA	NA
WP_013200173.1\|145031_145931_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_013200174.1\|146045_146804_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_013200175.1\|146863_147715_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
WP_013200176.1\|147876_148500_+	glutathione S-transferase	NA	NA	NA	NA
WP_013200177.1\|148502_149960_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_013200178.1\|150096_150681_+	LysE family translocator	NA	NA	NA	NA
WP_013200179.1\|150734_152354_-	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_013200180.1\|152762_153215_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_013200181.1\|153304_154735_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_013200182.1\|154779_155547_-	triose-phosphate isomerase	NA	NA	NA	NA
WP_013200183.1\|155666_156260_-	YiiQ family protein	NA	NA	NA	NA
WP_013200184.1\|156350_156794_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_013200185.1\|156784_157531_-	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
WP_013200186.1\|157836_159015_+	multidrug efflux MFS transporter EmrD	S4TR35	Salmonella_phage	6.6e-09	23.7
WP_013200187.1\|159102_160113_-	class II fructose-bisphosphatase	NA	NA	NA	NA
WP_013200188.1\|160213_161728_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_013200189.1\|161760_162609_-	aquaporin family protein	NA	NA	NA	NA
WP_013200190.1\|163057_163297_+	cell division protein ZapB	NA	NA	NA	NA
WP_013200191.1\|163342_163828_-	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_041692178.1\|163934_164843_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_013200193.1\|165021_166353_-	HslU--HslV peptidase ATPase subunit	A0A173GE36	Erwinia_phage	9.3e-44	29.2
WP_013200194.1\|166364_166895_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA

DBSCAN-SWA_2

483678 : 544621

Cronobacter_phage(10.0%)

tRNA,plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013200445.1\|483678_485013_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_013200446.1\|485009_485684_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_013200447.1\|485680_487375_+	OmpA family protein	NA	NA	NA	NA
WP_013200448.1\|487378_487870_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_013200449.1\|488165_490832_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.1e-95	29.5
WP_013200450.1\|490828_493330_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	6.5e-06	43.8
WP_013200451.1\|493389_495060_+	acetyltransferase	NA	NA	NA	NA
WP_013200452.1\|495056_496160_+	hypothetical protein	NA	NA	NA	NA
WP_013200453.1\|496232_497315_+	hypothetical protein	NA	NA	NA	NA
WP_071822092.1\|497436_497712_+	PAAR domain-containing protein	A4PE23	Ralstonia_virus	3.0e-05	44.4
WP_013200454.1\|497731_498856_+	hypothetical protein	NA	NA	NA	NA
WP_013200455.1\|498852_502260_+	type VI secretion protein VasK	NA	NA	NA	NA
WP_013200456.1\|502259_503855_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_013200457.1\|503892_505647_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_041691870.1\|505610_506696_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_041691871.1\|506673_507219_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_013200460.1\|507218_507692_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_013200461.1\|507684_509085_+	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
WP_013200462.1\|509488_510067_-	transcriptional regulator	NA	NA	NA	NA
WP_013200463.1\|510130_511855_-	protein-disulfide reductase DsbD	NA	NA	NA	NA
WP_013200464.1\|512062_513364_-	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA
WP_013200465.1\|513481_514918_-	aspartate ammonia-lyase	NA	NA	NA	NA
WP_013200466.1\|515279_515741_+	FxsA family protein	NA	NA	NA	NA
WP_012442682.1\|515953_516247_+	co-chaperone GroES	A0A221S322	uncultured_virus	1.0e-11	40.0
WP_013200467.1\|516292_517936_+	chaperonin GroEL	A0A2I7SAK5	Vibrio_phage	4.6e-186	67.1
WP_013200468.1\|518172_518526_+	DUF4156 domain-containing protein	NA	NA	NA	NA
WP_013200469.1\|518644_519673_-	EF-P beta-lysylation protein EpmB	NA	NA	NA	NA
WP_013200470.1\|519714_520281_+	elongation factor P	NA	NA	NA	NA
WP_034891515.1\|520340_520472_+	entericidin A/B family lipoprotein	NA	NA	NA	NA
WP_013200472.1\|520580_520715_+	entericidin A/B family lipoprotein	NA	NA	NA	NA
WP_013200473.1\|520750_521278_-	lipocalin family protein	A0A1W6JNX6	Morganella_phage	4.9e-49	58.3
WP_041692197.1\|521348_521690_-	fumarate reductase subunit FrdD	NA	NA	NA	NA
WP_013200475.1\|521701_522109_-	fumarate reductase subunit FrdC	NA	NA	NA	NA
WP_013200476.1\|522120_522855_-	succinate dehydrogenase/fumarate reductase iron-sulfur subunit	NA	NA	NA	NA
WP_013200477.1\|522847_524629_-	fumarate reductase (quinol) flavoprotein subunit	A0A2P0ZL82	Lactobacillus_phage	5.3e-18	29.3
WP_013200478.1\|524913_525891_+	elongation factor P--(R)-beta-lysine ligase	NA	NA	NA	NA
WP_013200479.1\|525929_529265_-	miniconductance mechanosensitive channel MscM	NA	NA	NA	NA
WP_013200480.1\|529274_530174_-	phosphatidylserine decarboxylase	NA	NA	NA	NA
WP_013200481.1\|530280_531339_-	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA
WP_013200482.1\|531435_531981_+	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	1.7e-28	41.4
WP_013200483.1\|532751_533888_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_013200484.1\|533886_535410_+	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA
WP_013200485.1\|535406_535883_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_041691872.1\|535879_537547_+	N-acetylmuramoyl-L-alanine amidase AmiB	M1HNA7	Bacillus_virus	2.9e-26	28.0
WP_013200487.1\|537564_539448_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	1.1e-63	42.6
WP_013200488.1\|539440_540391_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_013200489.1\|540493_540802_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_013200490.1\|541011_542292_+	GTPase HflX	NA	NA	NA	NA
WP_013200491.1\|542362_543613_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_013200492.1\|543616_544621_+\|protease	protease modulator HflC	NA	NA	NA	NA

DBSCAN-SWA_3

1232304 : 1293115

Salmonella_phage(66.67%)

tail,protease,lysis,integrase,capsid,terminase,tRNA,head,portal,plate

attL 1226575:1226589|attR 1300851:1300865

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1226575:1226589	attL	NA	NA	NA	NA
WP_013201089.1\|1232304_1232784_-\|tRNA	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	NA	NA	NA	NA
WP_013201090.1\|1232957_1233758_-	TraB/GumN family protein	NA	NA	NA	NA
WP_013201091.1\|1233849_1236423_-	copper-exporting P-type ATPase CopA	A0A218MNH6	uncultured_virus	5.1e-107	36.5
WP_013201092.1\|1236519_1236930_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_013201093.1\|1236945_1237953_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_013201094.1\|1238334_1239216_+	polysaccharide deacetylase	NA	NA	NA	NA
WP_013201095.1\|1239246_1240629_+	MFS transporter	NA	NA	NA	NA
WP_013201096.1\|1240632_1241406_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_041691928.1\|1241414_1242164_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	3.5e-08	42.7
WP_013201098.1\|1242179_1242476_+	hypothetical protein	NA	NA	NA	NA
WP_013201099.1\|1242479_1243559_+	GTP-binding protein	NA	NA	NA	NA
WP_013201100.1\|1243558_1244752_+	hypothetical protein	NA	NA	NA	NA
WP_013201101.1\|1244720_1245188_-	NfeD family protein	NA	NA	NA	NA
WP_013201102.1\|1245184_1246102_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
WP_013201103.1\|1246199_1247057_-	co-chaperone YbbN	NA	NA	NA	NA
WP_013201104.1\|1247134_1247908_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_013201105.1\|1248023_1249064_-\|integrase	tyrosine-type recombinase/integrase	A0A1S6L016	Salmonella_phage	3.9e-106	56.8
WP_013201106.1\|1249072_1249669_-	helix-turn-helix domain-containing protein	A0A1S6KZZ7	Salmonella_phage	1.5e-33	39.2
WP_013201107.1\|1249764_1250019_+	phage regulatory protein	F1BUS7	Erwinia_phage	2.7e-05	39.5
WP_013201108.1\|1250031_1250541_+	phage regulatory CII family protein	A0A0M4QWN1	Salmonella_phage	1.6e-49	58.9
WP_071822100.1\|1250548_1250740_+	DUF2724 domain-containing protein	F1BUS5	Erwinia_phage	3.3e-11	67.4
WP_013201109.1\|1250703_1251045_+	DUF5347 domain-containing protein	A0A1S6L019	Salmonella_phage	1.3e-31	59.3
WP_013201110.1\|1251112_1251340_+	DUF2732 domain-containing protein	A0A1S6L021	Salmonella_phage	2.8e-09	51.9
WP_013201111.1\|1251339_1251567_+	TraR/DksA C4-type zinc finger protein	F1BUS2	Erwinia_phage	1.9e-13	48.6
WP_013201112.1\|1251563_1252418_+	DNA adenine methylase	E5G6L8	Salmonella_phage	2.9e-91	62.8
WP_013201113.1\|1252414_1253167_+	hypothetical protein	M1FN76	Enterobacteria_phage	3.3e-123	80.4
WP_013201114.1\|1253163_1255425_+	replication endonuclease	F1BUS0	Erwinia_phage	0.0e+00	75.8
WP_013201115.1\|1255529_1255721_+	hypothetical protein	NA	NA	NA	NA
WP_041691929.1\|1255769_1256027_+	hypothetical protein	J9Q7T5	Salmonella_phage	5.1e-15	47.1
WP_013201116.1\|1256248_1256980_+	hypothetical protein	NA	NA	NA	NA
WP_013201117.1\|1257022_1258060_-\|portal	phage portal protein	E5G6M3	Salmonella_phage	7.7e-171	90.0
WP_013201118.1\|1258059_1259826_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	89.5
WP_013201119.1\|1259969_1260824_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	1.3e-107	81.7
WP_013201120.1\|1260840_1261902_+\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	1.2e-166	84.9
WP_013201121.1\|1261905_1262556_+\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	5.5e-90	78.2
WP_041692225.1\|1262662_1263127_+\|head	head completion/stabilization protein	E5G6M8	Salmonella_phage	3.3e-57	67.5
WP_013201123.1\|1263126_1263330_+\|tail	tail protein X	E5G6M9	Salmonella_phage	2.7e-27	83.6
WP_081461027.1\|1263333_1263546_+	hypothetical protein	E5G6N0	Salmonella_phage	1.5e-17	60.9
WP_041691931.1\|1263526_1264042_+	lysozyme	E5G6N1	Salmonella_phage	1.2e-76	81.8
WP_157868008.1\|1264038_1264467_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	2.5e-43	66.4
WP_013201127.1\|1264562_1264997_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	2.3e-52	72.5
WP_013201128.1\|1264989_1265445_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	1.7e-42	57.4
WP_013201129.1\|1265802_1266795_-	DUF4435 domain-containing protein	NA	NA	NA	NA
WP_013201130.1\|1266787_1267843_-	AAA family ATPase	NA	NA	NA	NA
WP_013201131.1\|1268249_1268828_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	2.3e-71	79.4
WP_041691933.1\|1268824_1269184_+	GPW/gp25 family protein	A0A1S6KZZ4	Salmonella_phage	1.8e-39	63.0
WP_013201133.1\|1269170_1270085_+\|plate	baseplate J/gp47 family protein	A0A1S6KZY6	Salmonella_phage	4.8e-100	64.9
WP_013201134.1\|1270081_1270696_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	4.4e-89	76.5
WP_013201135.1\|1270692_1271808_+\|tail	phage tail protein	A0A2I8TVA9	Erwinia_phage	7.6e-100	55.0
WP_013201136.1\|1271807_1272398_+\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	5.9e-43	46.0
WP_013201137.1\|1272517_1273690_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.8e-208	92.1
WP_013201138.1\|1273702_1274218_+\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	8.4e-86	90.6
WP_013201139.1\|1274276_1274600_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	1.2e-26	68.1
WP_071822138.1\|1274614_1274737_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	1.8e-10	71.8
WP_013201140.1\|1274729_1277375_+\|tail	phage tail tape measure protein	A0A2H4JGB2	uncultured_Caudovirales_phage	6.0e-135	43.6
WP_013201141.1\|1277371_1277857_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-55	66.5
WP_013201142.1\|1277853_1278948_+	phage late control D family protein	E5G6Q3	Salmonella_phage	3.9e-149	74.2
WP_013201143.1\|1279027_1279246_+	ogr/Delta-like zinc finger family protein	Q37973	Salmonella_virus	4.0e-21	61.1
WP_013201144.1\|1279511_1280135_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
WP_013201145.1\|1280105_1280792_+	ABC transporter ATP-binding protein	A0A2H4UU96	Bodo_saltans_virus	2.0e-05	25.8
WP_013201146.1\|1280788_1283206_+	ABC transporter permease	NA	NA	NA	NA
WP_013201147.1\|1283362_1284016_+	acyl-homoserine-lactone synthase	NA	NA	NA	NA
WP_013201148.1\|1283983_1284727_-	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_013201149.1\|1285180_1286251_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_013201150.1\|1286247_1286757_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_013201151.1\|1286904_1287630_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_013201152.1\|1287629_1288124_-	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_013201153.1\|1288357_1289746_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	1.8e-45	35.0
WP_013201154.1\|1289813_1290902_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	5.3e-114	55.8
WP_013201155.1\|1290939_1291152_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_013201156.1\|1291151_1292018_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	2.6e-31	35.1
WP_041692228.1\|1292302_1293115_-\|integrase	site-specific integrase	A0A0M4R586	Salmonella_phage	3.1e-90	50.7
1300851:1300865	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1901684 : 1911416

uncultured_Caudovirales_phage(20.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013201718.1\|1901684_1902935_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	8.2e-18	87.0
WP_013201719.1\|1903066_1903537_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_013201720.1\|1903536_1904064_-	ATP-binding protein	A0A2H4JFX6	uncultured_Caudovirales_phage	1.1e-21	34.4
WP_013201721.1\|1904285_1905116_-	alpha/beta hydrolase	A0A0B5A484	Mycobacterium_phage	4.9e-11	29.1
WP_013201722.1\|1905431_1905812_+\|holin	phage holin family protein	F1C592	Cronobacter_phage	3.7e-30	58.0
WP_013201723.1\|1905798_1906086_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_157868011.1\|1906094_1906232_-	hypothetical protein	NA	NA	NA	NA
WP_013201724.1\|1906353_1907043_-	helix-turn-helix transcriptional regulator	F1C5C2	Cronobacter_phage	5.6e-93	75.5
WP_013201725.1\|1907322_1907790_+	glycoside hydrolase family protein	H9C148	Vibrio_phage	2.0e-25	44.4
WP_013201726.1\|1907786_1908137_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	9.9e-22	45.5
WP_041691969.1\|1908133_1908406_+	hypothetical protein	NA	NA	NA	NA
WP_013201728.1\|1908567_1910319_+	exopolysaccharide biosynthesis protein CpsF	A0A1S6L3G8	Erwinia_phage	2.4e-164	48.0
WP_013201729.1\|1910618_1910816_+	hypothetical protein	NA	NA	NA	NA
WP_013201730.1\|1910831_1911071_-	hypothetical protein	A0A2H4J1D0	uncultured_Caudovirales_phage	4.4e-13	53.6
WP_013201731.1\|1911170_1911416_-	DinI family protein	K7PKR6	Enterobacteria_phage	1.5e-24	69.6

DBSCAN-SWA_5

2131435 : 2147198

Agrobacterium_phage(11.11%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071822113.1\|2131435_2131987_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	9.8e-16	32.5
WP_004157374.1\|2132078_2132276_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_013201905.1\|2132316_2132673_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_157868016.1\|2132712_2132805_+	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_013201908.1\|2133959_2136347_+\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	1.7e-08	28.9
WP_004157378.1\|2136351_2136651_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	5.5e-13	40.0
WP_013201909.1\|2136704_2137688_+	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
WP_013201910.1\|2137728_2138274_+	glutathione peroxidase	A0A1S7DM81	Molluscum_contagiosum_virus	1.0e-12	37.4
WP_013201911.1\|2138274_2139006_+	vitamin B12 ABC transporter ATP-binding protein BtuD	A0A2R8FG22	Brazilian_cedratvirus	3.3e-11	28.1
WP_013201912.1\|2139078_2139537_+	C40 family peptidase	A0A217EQL1	Bacillus_phage	1.9e-12	37.1
WP_013201913.1\|2139921_2140662_+	EAL domain-containing protein	NA	NA	NA	NA
WP_013201914.1\|2140769_2142209_+	YdiU family protein	A0A075BSJ0	Microcystis_phage	2.2e-59	38.3
WP_013201915.1\|2142332_2143379_-	3-deoxy-7-phosphoheptulonate synthase	S4W5F1	Pandoravirus	3.8e-85	49.7
WP_013201916.1\|2143510_2144344_-	kinase/pyrophosphorylase	NA	NA	NA	NA
WP_013201917.1\|2144816_2147198_+	phosphoenolpyruvate synthase	A0A1V0SGR7	Hokovirus	3.5e-166	35.9

DBSCAN-SWA_6

3250877 : 3262564

Escherichia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013202938.1\|3250877_3254447_-	glycosyltransferase	Q854P7	Mycobacterium_phage	7.3e-11	39.2
WP_013202939.1\|3254443_3255778_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_013202940.1\|3255767_3256586_-	ABC transporter permease	NA	NA	NA	NA
WP_013202941.1\|3256582_3257128_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	2.7e-50	55.6
WP_013202942.1\|3257158_3258034_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.1e-106	63.4
WP_013202943.1\|3258084_3258972_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.0e-26	34.0
WP_013202944.1\|3258971_3260051_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.4e-98	51.3
WP_013202945.1\|3260604_3261618_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	5.0e-74	44.3
WP_013202946.1\|3261667_3262564_-	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	9.6e-45	39.6

DBSCAN-SWA_7

3508259 : 3581411

uncultured_Caudovirales_phage(15.38%)

tail,protease,integrase,terminase,transposase,tRNA,holin,plate

attL 3513482:3513496|attR 3542675:3542689

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013203144.1\|3508259_3510269_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_013203145.1\|3510309_3510591_-	YfcL family protein	NA	NA	NA	NA
WP_013203146.1\|3510621_3511167_-	elongation factor P hydroxylase	NA	NA	NA	NA
WP_013203147.1\|3511178_3511982_-	TSUP family transporter	NA	NA	NA	NA
WP_013203148.1\|3511991_3512816_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_013203149.1\|3512820_3513906_-	chorismate synthase	A0A291AU41	Pandoravirus	5.7e-92	48.6
3513482:3513496	attL	NA	NA	NA	NA
WP_013203150.1\|3513930_3514863_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_013203152.1\|3515051_3515603_+	endonuclease SmrB	NA	NA	NA	NA
WP_013203153.1\|3515639_3516122_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_157868067.1\|3516292_3518464_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_013203155.1\|3518472_3519783_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_013203156.1\|3519948_3520245_-	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_013203157.1\|3520622_3521906_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_013203158.1\|3521969_3522731_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_013203159.1\|3522762_3523974_-	c-type cytochrome biogenesis protein CcmI	NA	NA	NA	NA
WP_013203160.1\|3523973_3524429_-	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA
WP_013203161.1\|3524425_3524983_-	DsbE family thiol:disulfide interchange protein	NA	NA	NA	NA
WP_013203162.1\|3524979_3526935_-	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA
WP_013203163.1\|3526931_3527423_-	cytochrome c maturation protein CcmE	NA	NA	NA	NA
WP_013203164.1\|3527419_3527653_-	heme exporter protein CcmD	NA	NA	NA	NA
WP_013203165.1\|3527649_3528393_-	heme ABC transporter permease	NA	NA	NA	NA
WP_013203166.1\|3528450_3529110_-	heme exporter protein CcmB	NA	NA	NA	NA
WP_013203167.1\|3529109_3529727_-	cytochrome c biogenesis heme-transporting ATPase CcmA	W5SAS9	Pithovirus	8.2e-11	30.4
WP_013203168.1\|3529967_3530885_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	2.9e-113	74.3
WP_013203169.1\|3531568_3532726_+\|integrase	tyrosine-type recombinase/integrase	E7DYQ6	Enterobacteria_phage	1.0e-176	75.8
WP_013203171.1\|3533724_3534045_-	hypothetical protein	A0A2H4J4R6	uncultured_Caudovirales_phage	8.8e-17	43.9
WP_173363016.1\|3534046_3534289_-	DNA polymerase V	I6PD82	Cronobacter_phage	6.4e-12	47.4
WP_013203173.1\|3534453_3535485_-	acyltransferase	T1SAQ6	Salmonella_phage	4.0e-10	26.5
WP_013203174.1\|3535609_3535756_-	hypothetical protein	NA	NA	NA	NA
WP_071822143.1\|3535770_3536487_-	hypothetical protein	Q6QI97	Burkholderia_phage	9.1e-46	47.5
WP_013203176.1\|3537608_3538271_-	hypothetical protein	NA	NA	NA	NA
WP_041692073.1\|3538271_3539399_-\|plate	baseplate J/gp47 family protein	B3GAJ9	uncultured_virus	7.3e-50	40.6
WP_041692074.1\|3539403_3539769_-\|tail	phage tail protein	NA	NA	NA	NA
WP_013203179.1\|3539778_3540378_-\|plate	baseplate assembly protein	B3GAJ7	uncultured_virus	5.9e-14	37.1
WP_041692075.1\|3540374_3541490_-	type IV secretion protein Rhs	NA	NA	NA	NA
WP_013203181.1\|3541492_3542482_-	hypothetical protein	S5MNM1	Brevibacillus_phage	2.6e-14	36.8
WP_013203182.1\|3542595_3543138_+\|protease	ATP-dependent Clp protease proteolytic subunit	NA	NA	NA	NA
3542675:3542689	attR	NA	NA	NA	NA
WP_013203183.1\|3543177_3545478_-	hypothetical protein	K4NZX3	Burkholderia_phage	4.2e-36	25.5
WP_013203184.1\|3545554_3546052_-	hypothetical protein	NA	NA	NA	NA
WP_013203185.1\|3546138_3546621_-	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
WP_013203186.1\|3546631_3546811_-	hypothetical protein	NA	NA	NA	NA
WP_013203187.1\|3547125_3547563_-	hypothetical protein	NA	NA	NA	NA
WP_013203188.1\|3547744_3548122_-	hypothetical protein	NA	NA	NA	NA
WP_013203189.1\|3548132_3548564_-	hypothetical protein	NA	NA	NA	NA
WP_013203190.1\|3548609_3550166_-\|tail	phage tail protein	B3GAJ6	uncultured_virus	3.9e-94	44.0
WP_013203191.1\|3550226_3550412_-	hypothetical protein	NA	NA	NA	NA
WP_013203192.1\|3550415_3551237_-	hypothetical protein	NA	NA	NA	NA
WP_013203193.1\|3551238_3551883_-	hypothetical protein	NA	NA	NA	NA
WP_013203194.1\|3551884_3552277_-	hypothetical protein	NA	NA	NA	NA
WP_013203195.1\|3552276_3552504_-	hypothetical protein	NA	NA	NA	NA
WP_013203196.1\|3552550_3553675_-	hypothetical protein	W6EBZ8	Rhizobium_phage	8.5e-99	55.9
WP_013203197.1\|3553690_3554443_-	hypothetical protein	G8C7P6	Escherichia_phage	2.4e-49	43.2
WP_049789664.1\|3554568_3555909_-	DUF4055 domain-containing protein	A0A0S2SYJ5	Pseudomonas_phage	1.5e-86	39.8
WP_013203199.1\|3555981_3557466_-\|terminase	terminase	A0A1W6JNY3	Morganella_phage	1.7e-251	83.4
WP_013203200.1\|3557465_3558068_-	hypothetical protein	G8C7P2	Escherichia_phage	4.2e-76	80.9
WP_013203201.1\|3558071_3558275_-	hypothetical protein	NA	NA	NA	NA
WP_041692076.1\|3558337_3558631_-	hypothetical protein	NA	NA	NA	NA
WP_013203203.1\|3559224_3559434_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013203205.1\|3559849_3560284_-	hypothetical protein	NA	NA	NA	NA
WP_041692078.1\|3560280_3560718_-	lysozyme	Q5G8R3	Enterobacteria_phage	2.1e-45	60.8
WP_013203207.1\|3560701_3561055_-\|holin	phage holin, lambda family	NA	NA	NA	NA
WP_013203208.1\|3561616_3562240_-	hypothetical protein	A0A2H4JCH5	uncultured_Caudovirales_phage	4.3e-92	75.7
WP_013203209.1\|3562236_3562815_-	recombination protein NinG	A0A2R2Z332	Escherichia_phage	7.9e-32	40.0
WP_157868029.1\|3562780_3562945_-	hypothetical protein	NA	NA	NA	NA
WP_041692079.1\|3562941_3563154_-	hypothetical protein	H6WRY8	Salmonella_phage	2.3e-13	50.8
WP_013203211.1\|3563140_3563347_-	protein ninH	A0A088CC23	Shigella_phage	1.7e-13	68.4
WP_041692080.1\|3563343_3563715_-	hypothetical protein	NA	NA	NA	NA
WP_013203212.1\|3563711_3564143_-	recombination protein NinB	A0A2H4J8D9	uncultured_Caudovirales_phage	5.6e-59	79.9
WP_013203213.1\|3564642_3565347_-	DNA replication protein	A0A077KCC8	Edwardsiella_phage	2.8e-63	54.0
WP_013203215.1\|3566287_3567121_-	DNA-binding protein	A0A2H4J902	uncultured_Caudovirales_phage	2.9e-120	79.8
WP_013203216.1\|3567154_3567493_-	hypothetical protein	A0A1W6JNY4	Morganella_phage	4.8e-21	57.5
WP_041692082.1\|3567614_3567833_-	helix-turn-helix transcriptional regulator	I6S1U2	Salmonella_phage	1.3e-16	57.6
WP_041692083.1\|3567941_3568601_+	LexA family transcriptional regulator	K7P8B2	Enterobacteria_phage	6.4e-70	62.0
WP_013203219.1\|3568663_3568885_+	hypothetical protein	A0A1P8DTH3	Proteus_phage	1.8e-13	58.1
WP_013203220.1\|3569561_3569885_+	DUF3024 domain-containing protein	NA	NA	NA	NA
WP_041692085.1\|3570963_3571173_-	hypothetical protein	G8C7T7	Escherichia_phage	7.0e-15	70.5
WP_013203223.1\|3571889_3572468_+	hypothetical protein	NA	NA	NA	NA
WP_041692086.1\|3572664_3572883_+	hypothetical protein	V5KT34	Escherichia_phage	2.6e-20	71.7
WP_013203226.1\|3573310_3574312_+	hypothetical protein	A0A2H4JIB1	uncultured_Caudovirales_phage	1.8e-55	79.3
WP_041692088.1\|3574363_3574666_-	anti-adapter protein IraP	NA	NA	NA	NA
WP_013203228.1\|3574786_3574960_+	hypothetical protein	NA	NA	NA	NA
WP_013203229.1\|3574956_3575271_+	hypothetical protein	NA	NA	NA	NA
WP_013203230.1\|3575270_3576089_+	PD-(D/E)XK nuclease-like domain-containing protein	E5AGE0	Erwinia_phage	4.0e-138	84.1
WP_013203231.1\|3576085_3576961_+	recombinase RecT	E5AGD9	Erwinia_phage	4.9e-134	81.5
WP_013203233.1\|3577546_3578230_-	SOS response-associated peptidase family protein	A0A2H4J5W2	uncultured_Caudovirales_phage	2.0e-90	66.4
WP_157868027.1\|3578312_3579486_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	2.7e-135	72.8
WP_013203235.1\|3580411_3581122_+	DNA cytosine methyltransferase	A0A2I7QIW2	Vibrio_phage	1.4e-59	49.6
WP_013203237.1\|3581207_3581411_+	excisionase	K7P7V0	Enterobacteria_phage	2.3e-26	80.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NC_014305

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_014305_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014305_1

132122-132285

Orphan

Consensus_repeat	Method
GTAGTGCCTGATTAACACACT	PILER-CR

2 spacers

The CRISPR arrays of NC_014305_1

>merge|NC_014305|1|132122-132285|PILER-CR
GTAGTGCCTGATTAACACACTTTTTTTGAGGTGTGGTGCTCAATTAACATACACAAGAATCGCTAAGGTGCCGGATTAACACACTGTCAATTTGCTTCAGGTGCCTGATTGACACACATCAGACTGACGCAGGAAACTAATTTGTAGTGCCTGATTGACACACA

>NC_014305|1|1|132122-132285|PILER-CR
GTAGTGCCTGATTAACACACT	TTTTTTGAGGTGTGGTGCTCAATTAACATACACAAGAATCGCT
AAGGTGCCGGATTAACACACT	GTCAATTTGCTTCAGGTGCCTGATTGACACACATCAGACTGACGCAGGAAACTAATTT
GTAGTGCCTGATTGACACACA

Protein	Signature genes	Signature genes Name	Protein_function
NC_014305.1\|WP_013199997.1\|129502_129802_+\|hypothetical-protein	unknown	unknown	unknown
NC_014305.1\|WP_013200007.1\|135007_135778_-\|response-regulator	unknown	unknown	gnl\|CDD\|225114
NC_014305.1\|WP_157867995.1\|129987_130173_+\|hypothetical-protein	unknown	unknown	unknown
NC_014305.1\|WP_157867996.1\|131074_131560_-\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|381603
NC_014305.1\|WP_013200008.1\|136589_137018_+\|conjugal-transfer-protein	unknown	unknown	gnl\|CDD\|131805
NC_014305.1\|WP_013200006.1\|134564_134993_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_014305.1\|WP_013199999.1\|130211_130544_+\|hypothetical-protein	unknown	unknown	unknown
NC_014305.1\|WP_013200012.1\|138712_140098_+\|conjugal-transfer-protein-TraB	unknown	unknown	gnl\|CDD\|184281
NC_014305.1\|WP_013200003.1\|132419_132809_+\|conjugal-transfer-protein	unknown	unknown	gnl\|CDD\|271351
NC_014305.1\|WP_013200010.1\|137377_137980_+\|conjugal-transfer-protein	unknown	unknown	gnl\|CDD\|377500
NC_014305.1\|WP_013200011.1\|137984_138716_+\|type-F-conjugative-transfer-system-secretin-TraK	unknown	unknown	gnl\|CDD\|237486
NC_014305.1\|WP_013200005.1\|134110_134563_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|226429
NC_014305.1\|WP_013199990.1\|124125_124551_+\|antirestriction-protein	unknown	unknown	gnl\|CDD\|377006
NC_014305.1\|WP_013200000.1\|130747_131059_+\|hypothetical-protein	unknown	unknown	unknown
NC_014305.1\|WP_013199994.1\|126028_128032_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|319263
NC_014305.1\|WP_013199993.1\|125689_125830_+\|hypothetical-protein	unknown	unknown	unknown
NC_014305.1\|WP_013199991.1\|124592_125003_+\|DUF1380-family-protein	unknown	unknown	gnl\|CDD\|369222
NC_014305.1\|WP_013200009.1\|137023_137326_+\|type-IV-conjugative-transfer-system-protein-TraL	unknown	unknown	gnl\|CDD\|184263
NC_014305.1\|WP_013200004.1\|132836_134114_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NC_014305.1\|WP_013199995.1\|128084_128810_+\|plasmid-SOS-inhibition-protein-A	unknown	unknown	gnl\|CDD\|369145

Protein	Function_ID	Function_description	E-value
NC_014305.1\|WP_013200007.1\|135007_135778_-\|response-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	1.90673e-08
NC_014305.1\|WP_013199995.1\|128084_128810_+\|plasmid-SOS-inhibition-protein-A	gnl\|CDD\|369145	pfam06952, PsiA, PsiA protein. This family consists of several Enterobacterial PsiA proteins. The function of PsiA is unknown although it is thought that it may affect the generation of an SOS signal in Escherichia coli.	1.58684e-121
NC_014305.1\|WP_157867996.1\|131074_131560_-\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|381603	cd13400, LT_IagB-like, Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	1.95578e-43
NC_014305.1\|WP_013200008.1\|136589_137018_+\|conjugal-transfer-protein	gnl\|CDD\|131805	TIGR02758, putative_conjugative_transfer_protein_TraA, type IV conjugative transfer system pilin TraA. TraA is the single structural subunit of the pilus found in type IV conjugative transfer systems. This family is generally found in gammaproteobacteria. The pilins show considerable heterogeneity among the different conjugative plasmit types. All of them however contain an N-terminal part which is cleaved off by a leader peptidase (LepB, or similar) to result in a 68-78 amino acid product. Pilins may be further processed by acetylation (in F-like systems by the TraX protein) or by cyclization (in P-like systems by the TraF protein).	1.14756e-08
NC_014305.1\|WP_013200006.1\|134564_134993_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.42197e-16
NC_014305.1\|WP_013200004.1\|132836_134114_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.03125e-26
NC_014305.1\|WP_013200012.1\|138712_140098_+\|conjugal-transfer-protein-TraB	gnl\|CDD\|184281	PRK13729, PRK13729, conjugal transfer pilus assembly protein TraB; Provisional.	0
NC_014305.1\|WP_013200003.1\|132419_132809_+\|conjugal-transfer-protein	gnl\|CDD\|271351	cd14804, Tra_M, TraM mediates signalling between transferosome and relaxosome. TraM is a plasmid encoded DNA-binding protein that is essential for conjugative transfer of F-like plasmids (e.g. F, R1, R100 and pED208) between bacterial cells. Bacterial conjugation, a form of horizontal gene transfer between cells, is an important contributor to bacterial genetic diversity, enabling virulence and antibiotics resistance factors to rapidly spread in medically important human pathogens. Mutation studies have shown that TraM is required for normal levels of transfer gene expression as well as for efficient site-specific single-stranded DNA cleavage at the origin of transfer (oriT). TraM tetramers bridge oriT to a key component of the conjugative pore, the coupling protein TraD. The N-terminal ribbon-helix-helix (RHH) domain of TraM is able to cooperatively bind DNA in a staggered arrangement without interaction between tetramers. This allows the C-terminal TraM tetramerization domains to be free to make multiple interactions with TraD, thus driving plasmid recruitment to the conjugative pore.	1.43759e-33
NC_014305.1\|WP_013200011.1\|137984_138716_+\|type-F-conjugative-transfer-system-secretin-TraK	gnl\|CDD\|237486	PRK13736, PRK13736, conjugal transfer protein TraK; Provisional.	8.73096e-113
NC_014305.1\|WP_013200005.1\|134110_134563_-\|oxidoreductase	gnl\|CDD\|226429	COG3915, COG3915, Uncharacterized protein conserved in bacteria [Function unknown].	2.902e-25
NC_014305.1\|WP_013199990.1\|124125_124551_+\|antirestriction-protein	gnl\|CDD\|377006	pfam03230, Antirestrict, Antirestriction protein. This family includes various protein that are involved in antirestriction. The ArdB protein efficiently inhibits restriction by members of the three known families of type I systems of E. coli.	2.82016e-33
NC_014305.1\|WP_013199994.1\|126028_128032_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|319263	cd16406, ParB_N_like, ParB N-terminal, parA-binding, -like domain of bacterial and plasmid parABS partitioning systems. This family represents the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system. parABS contributes to the efficient segregation of chromosomes and low-copy number plasmids to daughter cells during prokaryotic cell division. The process includes the parA (Walker box) ATPase, the ParB DNA-binding protein and a parS cis-acting DNA sites. Binding of ParB to centromere-like parS sites is followed by non-specific binding to DNA ("spreading", which has been implicated in gene silencing in plasmid P1) and oligomerization of additional ParB molecules near the parS sites. It has been proposed that ParB-ParB cross-linking compacts the DNA, binds to parA via the N-terminal region, and leads to parA separating the ParB-parS complexes and the recruitment of the SMC (structural maintenance of chromosomes) complexes. The ParB N-terminal domain of Bacillus subtilis and other species contains a Arginine-rich ParB Box II with residues essential for bridging of the ParB-parS complexes. The arginine-rich ParB Box II consensus (I[VIL]AGERR[FYW]RA[AS] identified in several species is partially conserved with this family and related families. Mutations within the basic columns particularly debilitate spreading from the parS sites and impair SMC recruitment. The C-terminal domain contains a HTH DNA-binding motif and is the primary homo-dimerization domain, and binds to parS DNA sites. Additional homo-dimerization contacts are found along the N-terminal domain, but dimerization of the N-terminus may only occur after concentration at ParB-parS foci.	1.10813e-23
NC_014305.1\|WP_013199991.1\|124592_125003_+\|DUF1380-family-protein	gnl\|CDD\|369222	pfam07128, DUF1380, Protein of unknown function (DUF1380). This family consists of several hypothetical bacterial proteins of around 140 residues in length. Members of this family seem to be specific to Enterobacteria. The function of this family is unknown.	2.72943e-10
NC_014305.1\|WP_013200009.1\|137023_137326_+\|type-IV-conjugative-transfer-system-protein-TraL	gnl\|CDD\|184263	PRK13707, PRK13707, type IV conjugative transfer system protein TraL.	4.34697e-52
NC_014305.1\|WP_013200010.1\|137377_137980_+\|conjugal-transfer-protein	gnl\|CDD\|377500	pfam05309, TraE, TraE protein. This family consists of several bacterial sex pilus assembly and synthesis proteins (TraE). Conjugal transfer of plasmids from donor to recipient cells is a complex process in which a cell-to-cell contact plays a key role. Many genes encoded by self-transmissible plasmids are required for various processes of conjugation, including pilus formation, stabilisation of mating pairs, conjugative DNA metabolism, surface exclusion and regulation of transfer gene expression. The exact function of the TraE protein is unknown.	4.85902e-61

>NC_014305.1|WP_157867996.1|131074_131560_-|transglycosylase-SLT-domain-containing-protein
MCFTRAGHDYGIDPLLLTAISIKESRLIADAVNGDNRNKTEDVCGMQVNSSHYKKLKQFNIDRARLLDDPCICVYAGAWVLAHNFRSYGKNWSSVGMYNTGPSPKLITQRNAYANDIKNIYRVLLARAIVAGGNNQSGIAAKTDTDNNDEPTTQVIKKPVR
>NC_014305.1|WP_013200000.1|130747_131059_+|hypothetical-protein
MDEKQMRVLTCSMNNITRRDAVILAELSGEQAGNGPERWVVNIFFGFMIIPGKLAIPAMCMRNAGLSEDAIRLLTEAREINGADVVIIDRDAKPLEGWPMQPW
>NC_014305.1|WP_013199999.1|130211_130544_+|hypothetical-protein
MEKNENALLRYIMLSTAHLSHQDALTLAYLSDPIDSAETCTHEWIHSTGMHNGFIIRLTARSDAPGELRTRGISDALCSTLELLSRSLNVSMIHFDRDADVLTGLPVYEG
>NC_014305.1|WP_157867995.1|129987_130173_+|hypothetical-protein
MRHTRISREDVVERDIAPEIRARSRHVAHCVQKRQTVRVPAMRVSEWGQFLRGLELKRALA
>NC_014305.1|WP_013199997.1|129502_129802_+|hypothetical-protein
MNTHNVNVKTATPESSKRWGETNLTEDQFFDLCEYVCANGKFCGWSGVDWQELSRYQAVAEPGDWPEGLTLYLADGWPVAVYQFDTGYTVIEKALLTAP
>NC_014305.1|WP_013199995.1|128084_128810_+|plasmid-SOS-inhibition-protein-A
MSHIPRHLSLVPACPYRQAVAAATAEVVKRQQGRALSGDHPWANAFLRHFCGTKTIRSGHLRRVVPEYLPRDRHGPGAASYLRALDVLIRTRGECCPLPLSSHTGQLLFPENLTRTAERQIRRVELRVNKRLSREEREREQKRRRYQNRLAQAEIDLAFHTPSTVSSWYSRWQHQDLYEDDLQSRVYAWLRRFPSGQQADPMEWHGVKLWRQMLEISDMAGELAPDQQLADRMVLPDRLPG
>NC_014305.1|WP_013199994.1|126028_128032_+|ParB/RepB/Spo0J-family-partition-protein
MAQQNVNTAAKETQESSAPKTRKRTAKSEAGKTAGVEKVLQAATLVSAPLSRLELSPHQARRRKHADDHIRGLADSISGVGLLQNLVGHEMAGGQIGIAAGGGRLLALQLLQGEGRWQDDRAVPVLIVPENMAKAVSLTENGRRCDMHPAEQIAGFRSMAEDGNTPAQIADLMGYSTRHVERCLRLANLAPSLLCLLSEDRITLDHCQALALADSHERQEQVWEIAVSSCYATPTPQRLRALVTESEVSIADSDLFCFTGAEGVAAVGGEVRRDLFSDEDGGFVDALTLERAALAKLSGIAADVAAREGWAWSEARLTPVASWGEDARLFRRYPVPEPVYTPQQAERLEQLDTLIQEAGEEEYAALDAELAALHDAGEAADWIDDVRAAGGVVASLDDGVLTLQRGLLRITEEERAAAEARQAAQVVTVKKEPAEADAFSATLVKELSCERTLAVQAALCTRADIAVTLMTWHLARKVFSGSYRYNDPSRVQLNDNQSVLSACSGSGEAGKAYRFLMEEKGRWQLRLPTGWDEDMGWLLAWKEEDRTALLGFLSALSVDGIQERLYGSTRTSALDGLETAMGFDLYAWWQPTAENYFGRISRPLICAALTDAGLTGKASDAAKMKKGDAAELAADELAARRWLPSWMMPVTGPEAGTAATDDVSDAA
>NC_014305.1|WP_013199993.1|125689_125830_+|hypothetical-protein
MATSGATPAASHGLAHITGRVAAAEDRPACAVRGCPTFVTTVVMFS
>NC_014305.1|WP_013199991.1|124592_125003_+|DUF1380-family-protein
MYGTVNELAARLLRDYPADEMLTLIIWSREDVRDFVADLMLTEEEAGRILADIDNLHETHECGVGEVTVRIMAENMREEARALRDVTVPAHALENVVRLAAEFLRMAEIECGEGAAKRLYEQGPDAVAKIRRALEG
>NC_014305.1|WP_013199990.1|124125_124551_+|antirestriction-protein
MNTQTPAAFHVDRYVKMRFLPMLFSHDYVRAEHNVFLYASRFLSGYDGCEWEFIVLKKGGGFMQPCAAEWHFVSPDNGADLALSAEAAGLVITALVLNHRSWMYDRHDEPELCEHYCQRFRQLLAYAETHCEAAAIFRALD
>NC_014305.1|WP_013200003.1|132419_132809_+|conjugal-transfer-protein
MARRNIYFKEKTEREVHELVQLELQNGATHGEINFSSVVNELVGIGLMVKKHQGEGSKFDEEGFNRDLIRKVSGSREGISTMMAMLSEMYLQLRGENAAGALEALIDNNLTGISDAEDKSERKHFLDQE
>NC_014305.1|WP_013200004.1|132836_134114_-|HAMP-domain-containing-histidine-kinase
MRFFRPSLIIYLILSMLFTVAVVVTIDKFNGIKDQYASMEPNLDNYSTAEILFLAFERTRTAAYDEDNLDNFAIKKSIFDSKVHILKNKSININSFYYEEDFLAKLNKLESQSEALSRIYEKNIPYKNRKEEILKKMDSIQPTLIDLQEIIYRIQIRNFNKIKSIIQDNSSYTEATALASIFLLFLLMLLLWKHISKLKASLREKNIFISAIYHELSGSIQKIQMSREMIDLRGDILSAEKYLANITYHSNKLFHQTKEILEFSKIEIGNIEIKKTIFALSEIIEDIEHLFNIKNHNELIVKSSKSDLCIKSDKQKVSSIIHNLVDNANKNTFRGKINLTLRLTNNNLFIKVSDTGCGFDIKKLNRLYEPFNQGMQSETKQGLGLGLTIIKSHLKTLNAKIKVRSTLEVGSVFFVYIPLINNKKD
>NC_014305.1|WP_013200005.1|134110_134563_-|oxidoreductase
MNKIVITFLGILFCKAAFSATLTLANDGTETSISTADLQKLSVSKISTSTNFTPFAEFEGATLTSFAKSYNVQGRLLRVYALDDYSYTIPLRELEKFNAIIAYKKNGTMMPVSDLGPFAIIYPRDQHPELNSLDVNAKTVWQIKKIEVVE
>NC_014305.1|WP_013200006.1|134564_134993_-|GNAT-family-N-acetyltransferase
MEFIKLEPEHIKEMYDIRFSVEENFVHPHQIKYLQRQQVIEDVEQGGGWICKLGEEFVGYGLGIFAPNPMIGGLFVRPEFQGKGIGSTIMIEIMDWFFNDGLSEIELTTDPSSNAVLFYEKHGWAKAGFDEFGQLVMKVTGK
>NC_014305.1|WP_013200007.1|135007_135778_-|response-regulator
MQKQNVNLDKIIKLFNLKGIEKRKQASMMAEILDIKYQSAKQKLDEKRGITYNEVKGIFKYFNVSLEEERNHNGIFIMNDMHVRCNVEVDNSIVNKKENNTNYATMKGNFYIINSSSSYFSPEMKKVNKIDFLPAPKLAILDNDVDMLDLLNSVCNRYGINASVFQNKTEILAAMEKESFECYIIDWLLDYAENSEEVIKKIRKDSDKTPIILLTGQLNQHEREIGEAIMDYGVELIEKPTRIFIISSILLANLFY
>NC_014305.1|WP_013200008.1|136589_137018_+|conjugal-transfer-protein
MKSLSTISGEPVNVAVALPESELKRSGNIISHIKKSIYSFSIPRLKSRLRHSPEAQRNLALFALMLAVVIFPHIAGAEDLLKSQKADANDTFGHGSTVEWVLYIAEIIVSVVGYIKTRNPMVFAGLVILILITRAFFSLAGS
>NC_014305.1|WP_013200009.1|137023_137326_+|type-IV-conjugative-transfer-system-protein-TraL
MDSDALKYRFPETLNGQKRVFGLPPEEAFVLVGCGVIGFFCDIFIIMLCVGAVLWLFVRHLKKGQGSWWLLNLLYWYLPTVLFRVQFRRTPDSGNRHWMQ
>NC_014305.1|WP_013200010.1|137377_137980_+|conjugal-transfer-protein
MKLQVKETRNRVTVMALTAMTGLLALSVAGNCITGTLAWHFYSTQKTITTPMMFDRAFTSTAAEGDASLNSMLVRSFANLRLSVTPETVDAQHAALLRYVPPQDRSELKKSLAAEADYIKKNGISTVFRIDDESTDTGTGDITVSGTLSAGTSNGSLKLAIPDVTKAYRLSLHYVDGLIRLTAFPEVTPPGKPDGLSPQG
>NC_014305.1|WP_013200011.1|137984_138716_+|type-F-conjugative-transfer-system-secretin-TraK
MKVTFTAALVAGALLTPAAMAAVSGPTGTVFENDAHLKAQLSNTSPNKIVIDGELITRVTGPENAFTQENTEDGALLITPVTGQNFTLFLETAGGVGASIDVVPKPGDGKTLRLIPASSRLKANPDAKAWEESQPWEKTLVSVARTVVNGGVPDSYTELPADRGPAYAPASGVTLTPERQLAGSHLRVMRYRMKNGGYVTRELSEKQFWQQGVRAVLLSTRSLYAGGEGYVWVIFSTDKEGGS
>NC_014305.1|WP_013200012.1|138712_140098_+|conjugal-transfer-protein-TraB
MSNINTATRRRQWMVAGVTLAVAAATGGGIWWYAQHQAALKNPPPAPKAADMTGLVTTKFTDSVASSVLTQQQNKTAGLETSVSQLKADVQRQKDDMSQKLERLDTLISKLQGQADKQPPVAPGSTSPAAGPGPVPGGPAGPAQWNITDPNRGPAAGQGSQFYPGQGAGQGQGFYPGAGTGRTGGMTSRTFTYASLQHKKTTLPWISSGSFSEAVMIEGADANASVTGQQNTSPVVITLLGDVSMPNGRTWNMDQCRVTGEIYGDISSERGEVRTKNISCILKNGKHIDMPFDGHVAYQGKQGIRGKPVMRNGKIIGYAGAAGLLSGFGEGIQSAATPSVGLGATASVGAGDILKQGIGGGASKAADTLSQYWIKRAEQYHPVIDIGAGNAVTVVFQQGFRLETIEDVEAEKAVKDAPQATAQQAAAAVTNSGDNITRAPVLNPDEVLRQASQLKLGDTIN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_014305_1	1.1\|132143\|43\|NC_014305\|PILER-CR	132143-132185	43	NC_014305	Erwinia billingiae Eb661 plasmid pEB170, complete sequence	132143-132185	0	1.0
NC_014305_1	1.2\|132207\|58\|NC_014305\|PILER-CR	132207-132264	58	NC_014305	Erwinia billingiae Eb661 plasmid pEB170, complete sequence	132207-132264	0	1.0
NC_014305_1	1.2\|132207\|58\|NC_014305\|PILER-CR	132207-132264	58	NZ_CP037949	Erwinia sp. QL-Z3 plasmid unnamed1, complete sequence	53500-53557	3	0.948

1. spacer 1.1|132143|43|NC_014305|PILER-CR matches to NC_014305 (Erwinia billingiae Eb661 plasmid pEB170, complete sequence) position: , mismatch: 0, identity: 1.0

ttttttgaggtgtggtgctcaattaacatacacaagaatcgct	CRISPR spacer
ttttttgaggtgtggtgctcaattaacatacacaagaatcgct	Protospacer
*******************************************

2. spacer 1.2|132207|58|NC_014305|PILER-CR matches to NC_014305 (Erwinia billingiae Eb661 plasmid pEB170, complete sequence) position: , mismatch: 0, identity: 1.0

gtcaatttgcttcaggtgcctgattgacacacatcagactgacgcaggaaactaattt	CRISPR spacer
gtcaatttgcttcaggtgcctgattgacacacatcagactgacgcaggaaactaattt	Protospacer
**********************************************************

3. spacer 1.2|132207|58|NC_014305|PILER-CR matches to NZ_CP037949 (Erwinia sp. QL-Z3 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.948

gtcaatttgcttcaggtgcctgattgacacacatcagactgacgcaggaaactaattt	CRISPR spacer
atcagtttgcttcaggtgcctgattgacacacatcagactgatgcaggaaactaattt	Protospacer
.***.*************************************.***************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_014304

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_014306

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NC_014305

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection