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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_014960 Anaerolinea thermophila UNI-1, complete genome 8 crisprs cas4,csa3,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7 2 50 3 0

Results visualization

1. NC_014960
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014960_1 184285-185155 Orphan NA
11 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014960_2 602853-602962 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014960_3 757015-762020 Orphan NA
68 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014960_4 1369172-1384073 TypeI I-C
224 spacers
cas2,cas1,cas4,cas7,cas8c,cas5,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014960_5 2413728-2413787 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014960_6 2688386-2688575 TypeIII NA
2 spacers
cas2,cas1,cas6,csx15,csx1,csm5gr7,csm4gr5,csm3gr7,csm2gr11

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014960_7 3033043-3033149 TypeI-A NA
1 spacers
cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014960_8 3137389-3146252 TypeIII NA
120 spacers
cas4,cas2,cas1,cas6,cas3,cas5,cas7,cas8b2,csx15,csx1

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_014960_4 4.224|1384008|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1384008-1384041 34 NC_014960.1 2673308-2673341 0 1.0
NC_014960_4 4.219|1383679|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1383679-1383712 34 NC_014960.1 2637248-2637281 2 0.941

1. spacer 4.224|1384008|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to position: 2673308-2673341, mismatch: 0, identity: 1.0

aggtgggtagggtaagcatgtcaatcctttcgtc	CRISPR spacer
aggtgggtagggtaagcatgtcaatcctttcgtc	Protospacer
**********************************

2. spacer 4.219|1383679|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to position: 2637248-2637281, mismatch: 2, identity: 0.941

ggcggagaaaccgccggagcggggagacagagat	CRISPR spacer
ggcggagaaaccgccgggacggggagacagagat	Protospacer
*****************..***************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_014960_4 4.3|1369337|31|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1369337-1369367 31 NZ_CP030222 Salmonella enterica strain SA20021456 plasmid pSA20021456.3, complete sequence 3726-3756 7 0.774
NC_014960_4 4.18|1370328|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1370328-1370360 33 NZ_CP029997 Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.2, complete sequence 55850-55882 7 0.788
NC_014960_4 4.18|1370328|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1370328-1370360 33 CP053334 Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed2, complete sequence 34500-34532 7 0.788
NC_014960_4 4.19|1370393|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1370393-1370426 34 NZ_AP022333 Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence 146993-147026 7 0.794
NC_014960_4 4.81|1374513|31|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1374513-1374543 31 NZ_CP018781 Ochrobactrum pituitosum strain AA2 plasmid pOAAA2, complete sequence 243085-243115 7 0.774
NC_014960_4 4.160|1379769|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379769-1379802 34 NZ_CP007000 Campylobacter fetus subsp. venerealis cfvi03/293 plasmid pCfviMP1, complete sequence 58839-58872 7 0.794
NC_014960_4 4.160|1379769|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379769-1379802 34 NZ_CP014569 Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp1, complete sequence 29629-29662 7 0.794
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 NZ_HG938354 Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence 535785-535818 7 0.794
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 NZ_CP019585 Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence 337289-337322 7 0.794
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 NZ_CP054047 Yersinia massiliensis strain 2011N-4075 plasmid unnamed2, complete sequence 36894-36927 7 0.794
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 GU943061 Uncultured phage MedDCM-OCT-S04-C846 genomic sequence 4904-4937 7 0.794
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 GU943082 Uncultured phage MedDCM-OCT-S11-C561 genomic sequence 10180-10213 7 0.794
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 JX519267 Uncultured Mediterranean phage MEDS2 group fosmid MedDCM-OCT-S19-C1, complete sequence 2899-2932 7 0.794
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 JX519264 Uncultured Mediterranean phage MEDS2 group fosmid MedDCM-OCT-S14-C1, complete sequence 34814-34847 7 0.794
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 GU943058 Uncultured phage MedDCM-OCT-S04-C507 genomic sequence 2034-2067 7 0.794
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 GU943053 Uncultured phage MedDCM-OCT-S04-C148 genomic sequence 13424-13457 7 0.794
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 GU943081 Uncultured phage MedDCM-OCT-S11-C349 genomic sequence 3563-3596 7 0.794
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 GU943051 Uncultured phage MedDCM-OCT-S01-C29 genomic sequence 3649-3682 7 0.794
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 GU943060 Uncultured phage MedDCM-OCT-S04-C714 genomic sequence 2071-2104 7 0.794
NC_014960_4 4.163|1379967|31|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379967-1379997 31 AP014180 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C67-MedDCM-OCT-S37-C48, *** SEQUENCING IN PROGRESS *** 30184-30214 7 0.774
NC_014960_4 4.16|1370198|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1370198-1370230 33 NZ_CP030933 Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence 108176-108208 8 0.758
NC_014960_4 4.28|1370994|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1370994-1371027 34 KU737345 Bacillus phage Juglone, complete genome 106484-106517 8 0.765
NC_014960_4 4.28|1370994|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1370994-1371027 34 NC_031100 Bacillus phage Phrodo, complete genome 105793-105826 8 0.765
NC_014960_4 4.62|1373258|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1373258-1373291 34 NZ_CP025513 Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence 1091776-1091809 8 0.765
NC_014960_4 4.79|1374382|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1374382-1374416 35 MK450421 Streptomyces phage Vash, complete genome 41459-41493 8 0.771
NC_014960_4 4.80|1374449|32|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1374449-1374480 32 NC_009620 Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence 914762-914793 8 0.75
NC_014960_4 4.80|1374449|32|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1374449-1374480 32 MG732930 Enterobacter phage Ec_L1, complete genome 32001-32032 8 0.75
NC_014960_4 4.81|1374513|31|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1374513-1374543 31 NC_048182 Edwardsiella virus pEt-SU, complete genome 207654-207684 8 0.742
NC_014960_4 4.86|1374844|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1374844-1374877 34 NZ_CP020911 Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence 185871-185904 8 0.765
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP015038 Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence 160448-160481 8 0.765
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP015032 Burkholderia cenocepacia strain 842 plasmid pBcn842-1, complete sequence 32420-32453 8 0.765
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP020740 [Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence 45556-45589 8 0.765
NC_014960_4 4.117|1376910|33|NC_014960|CRISPRCasFinder,CRT 1376910-1376942 33 MG696114 Proteus phage phiP4-3, complete genome 133701-133733 8 0.758
NC_014960_4 4.117|1376910|33|NC_014960|CRISPRCasFinder,CRT 1376910-1376942 33 MK295204 Shigella phage vB_SdyM_006, complete genome 32225-32257 8 0.758
NC_014960_4 4.125|1377438|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1377438-1377471 34 NZ_CP045413 Roseovarius sp. THAF8 plasmid pTHAF8_c, complete sequence 38903-38936 8 0.765
NC_014960_4 4.125|1377438|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1377438-1377471 34 NZ_CP045395 Roseovarius sp. THAF27 plasmid pTHAF27_b, complete sequence 39627-39660 8 0.765
NC_014960_4 4.131|1377832|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1377832-1377865 34 MN694219 Marine virus AFVG_250M758, complete genome 7137-7170 8 0.765
NC_014960_4 4.138|1378297|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1378297-1378330 34 MN694219 Marine virus AFVG_250M758, complete genome 7137-7170 8 0.765
NC_014960_4 4.156|1379505|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379505-1379537 33 AP014180 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C67-MedDCM-OCT-S37-C48, *** SEQUENCING IN PROGRESS *** 30184-30216 8 0.758
NC_014960_4 4.169|1380362|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1380362-1380394 33 NZ_CP039693 Agrobacterium larrymoorei strain CFBP5473 plasmid pAlCFBP5473, complete sequence 164238-164270 8 0.758
NC_014960_4 4.206|1382812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1382812-1382845 34 NZ_KX009059 Pseudomonas syringae pv. actinidiae strain RT685 plasmid pMG1_RT685, complete sequence 3595-3628 8 0.765
NC_014960_4 4.206|1382812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1382812-1382845 34 NC_014390 Butyrivibrio proteoclasticus B316 plasmid pCY186, complete sequence 83151-83184 8 0.765
NC_014960_4 4.2|1369271|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1369271-1369304 34 MN693382 Marine virus AFVG_25M315, complete genome 6653-6686 9 0.735
NC_014960_4 4.36|1371526|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1371526-1371558 33 NZ_CP032685 Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence 397806-397838 9 0.727
NC_014960_4 4.36|1371526|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1371526-1371558 33 NZ_CP032690 Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence 397804-397836 9 0.727
NC_014960_4 4.49|1372396|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1372396-1372429 34 LR026976 Bacillus pumilus isolate 1 genome assembly, plasmid: p576 11651-11684 9 0.735
NC_014960_4 4.49|1372396|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1372396-1372429 34 CP027117 Bacillus phage EZ-2018a, complete genome 12486-12519 9 0.735
NC_014960_4 4.77|1374251|32|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1374251-1374282 32 NZ_CP051473 Rhodobacter sphaeroides strain CH10 plasmid pRspCH10DE, complete sequence 131097-131128 9 0.719
NC_014960_4 4.77|1374251|32|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1374251-1374282 32 NZ_CP030276 Rhodobacter sphaeroides 2.4.1 plasmid pDE, complete sequence 131121-131152 9 0.719
NC_014960_4 4.77|1374251|32|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1374251-1374282 32 NZ_CP015289 Rhodobacter sphaeroides strain MBTLJ-20 plasmid a, complete sequence 65288-65319 9 0.719
NC_014960_4 4.77|1374251|32|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1374251-1374282 32 NZ_CP014276 Martelella sp. AD-3 plasmid unnamed1, complete sequence 111146-111177 9 0.719
NC_014960_4 4.77|1374251|32|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1374251-1374282 32 NZ_CP015212 Rhodobacter sphaeroides strain MBTLJ-13 plasmid a, complete sequence 130425-130456 9 0.719
NC_014960_4 4.86|1374844|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1374844-1374877 34 NC_021911 Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence 1014768-1014801 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP016613 Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence 734402-734435 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP021449 Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence 1882628-1882661 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP022766 Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence 1962442-1962475 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP016555 Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence 1612173-1612206 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052069 Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence 1896509-1896542 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP016905 Ralstonia solanacearum strain KACC 10709 plasmid unnamed1 929508-929541 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP022769 Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence 1970750-1970783 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP015851 Ralstonia solanacearum strain YC40-M plasmid, complete sequence 499613-499646 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP022773 Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence 1680383-1680416 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP022791 Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence 2028968-2029001 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052071 Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence 1975277-1975310 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP022779 Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence 1982218-1982251 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052075 Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence 1975244-1975277 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052105 Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence 1973987-1974020 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052077 Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence 1877252-1877285 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052115 Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence 1974086-1974119 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052079 Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence 1877901-1877934 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052107 Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence 1974082-1974115 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP022781 Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence 2034079-2034112 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052117 Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence 1974071-1974104 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052125 Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence 1877277-1877310 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP022793 Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence 1888327-1888360 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP022785 Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence 1868962-1868995 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP022787 Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence 1931553-1931586 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP022756 Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence 1959979-1960012 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052121 Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence 1974071-1974104 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052123 Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence 1877277-1877310 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052073 Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence 1975067-1975100 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052081 Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence 1877277-1877310 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052083 Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence 1877277-1877310 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052109 Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence 1974082-1974115 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052103 Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence 1974093-1974126 9 0.735
NC_014960_4 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375111-1375144 34 NZ_CP052119 Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence 1973894-1973927 9 0.735
NC_014960_4 4.127|1377569|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1377569-1377603 35 NZ_LT591899 Neisseria gonorrhoeae strain WHO G plasmid 2, complete sequence 9222-9256 9 0.743
NC_014960_4 4.127|1377569|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1377569-1377603 35 NC_014105 Neisseria gonorrhoeae plasmid pEP5289, complete sequence 9222-9256 9 0.743
NC_014960_4 4.127|1377569|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1377569-1377603 35 NZ_LT591912 Neisseria gonorrhoeae strain WHO N plasmid 3, complete sequence 9222-9256 9 0.743
NC_014960_4 4.127|1377569|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1377569-1377603 35 NZ_CP045833 Neisseria gonorrhoeae strain AUSMDU00010541 plasmid pAUSMDU00010541_01, complete sequence 21998-22032 9 0.743
NC_014960_4 4.153|1379305|36|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379305-1379340 36 NZ_CP015232 Epibacterium mobile F1926 plasmid unnamed2, complete sequence 111802-111837 9 0.75
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 NZ_CP019585 Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence 337295-337328 9 0.735
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 NZ_CP054047 Yersinia massiliensis strain 2011N-4075 plasmid unnamed2, complete sequence 36888-36921 9 0.735
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 MT408532 Synechococcus phage SynMITS9220M01, complete genome 86147-86180 9 0.735
NC_014960_4 4.169|1380362|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1380362-1380394 33 NZ_KY000074 Agrobacterium larrymoorei strain CFBP5481 plasmid pTi_CFBP5481, complete sequence 31323-31355 9 0.727
NC_014960_4 4.192|1381885|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1381885-1381917 33 NC_016587 Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence 169470-169502 9 0.727
NC_014960_4 4.192|1381885|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1381885-1381917 33 NZ_CP029209 Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence 27310-27342 9 0.727
NC_014960_4 4.194|1382016|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1382016-1382049 34 NC_016108 Methylomicrobium alcaliphilum 20Z plasmid MEALZ_p, complete sequence 65442-65475 9 0.735
NC_014960_4 4.211|1383145|34|NC_014960|CRISPRCasFinder,CRT 1383145-1383178 34 NZ_CP016452 Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence 1525186-1525219 9 0.735
NC_014960_4 4.212|1383211|34|NC_014960|CRISPRCasFinder,CRT 1383211-1383244 34 NZ_CP026539 Desulfovibrio carbinolicus strain DSM 3852 plasmid pDCAR1, complete sequence 104696-104729 9 0.735
NC_014960_4 4.221|1383812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1383812-1383845 34 NZ_CP016700 Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence 29430-29463 9 0.735
NC_014960_4 4.221|1383812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1383812-1383845 34 LC316979 Lactococcus garvieae plasmid pNUF18 DNA, complete sequence, strain: NUF18 26175-26208 9 0.735
NC_014960_4 4.221|1383812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1383812-1383845 34 LC316980 Lactococcus garvieae plasmid pNUF462 DNA, complete sequence, strain: NUF462 26175-26208 9 0.735
NC_014960_4 4.221|1383812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1383812-1383845 34 LC316981 Lactococcus garvieae plasmid pNs15sousui29 DNA, complete sequence, strain: Ns15sousui29 27186-27219 9 0.735
NC_014960_4 4.221|1383812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1383812-1383845 34 LC205736 Lactococcus garvieae plasmid pBSLG13015 DNA, complete sequence, strain: BSLG13015 27186-27219 9 0.735
NC_014960_4 4.221|1383812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1383812-1383845 34 NZ_MG813924 Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03P plasmid pLd10, complete sequence 8480-8513 9 0.735
NC_014960_8 8.62|3141935|35|NC_014960|CRISPRCasFinder,PILER-CR 3141935-3141969 35 NZ_CP028888 Borrelia turcica IST7 plasmid cp33, complete sequence 29009-29043 9 0.743
NC_014960_3 3.14|758008|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 758008-758042 35 NZ_CP040764 Paracoccus sp. 2251 plasmid unnamed3, complete sequence 133479-133513 10 0.714
NC_014960_3 3.60|761367|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 761367-761401 35 NC_049445 Acinetobacter phage AbTZA1, complete genome 57245-57279 10 0.714
NC_014960_3 3.62|761511|37|NC_014960|CRISPRCasFinder,CRT,PILER-CR 761511-761547 37 MN657156 Sporosarcina sp. strain ANT_H38 plasmid pA38H4, complete sequence 2955-2991 10 0.73
NC_014960_4 4.12|1369935|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1369935-1369968 34 NZ_CP012182 Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence 509802-509835 10 0.706
NC_014960_4 4.12|1369935|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1369935-1369968 34 NZ_CP010990 Pseudonocardia sp. EC080625-04 plasmid pFRP1-1, complete sequence 44444-44477 10 0.706
NC_014960_4 4.12|1369935|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1369935-1369968 34 NZ_CP012185 Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence 538736-538769 10 0.706
NC_014960_4 4.62|1373258|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1373258-1373291 34 NZ_CP011515 Mitsuaria sp. 7 plasmid, complete sequence 115695-115728 10 0.706
NC_014960_4 4.94|1375379|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375379-1375412 34 MH629685 Synechococcus virus S-PRM1, complete genome 32789-32822 10 0.706
NC_014960_4 4.112|1376574|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1376574-1376608 35 KX119176 Helicobacter phage Pt1846U, complete genome 7831-7865 10 0.714
NC_014960_4 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1378230-1378264 35 NZ_CP050093 Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence 502583-502617 10 0.714
NC_014960_4 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1378230-1378264 35 NZ_CP050082 Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence 687242-687276 10 0.714
NC_014960_4 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1378230-1378264 35 NZ_CP050099 Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence 442736-442770 10 0.714
NC_014960_4 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1378230-1378264 35 NC_008384 Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence 662358-662392 10 0.714
NC_014960_4 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1378230-1378264 35 NZ_CP049732 Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence 639133-639167 10 0.714
NC_014960_4 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1378230-1378264 35 NZ_CP053441 Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence 470925-470959 10 0.714
NC_014960_4 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1378230-1378264 35 NZ_CP048282 Rhizobium leguminosarum bv. viciae 248 plasmid pRle248d, complete sequence 526562-526596 10 0.714
NC_014960_4 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1378230-1378264 35 NZ_CP053208 Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence 589138-589172 10 0.714
NC_014960_4 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1378230-1378264 35 NZ_CP017244 Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence 1970419-1970453 10 0.714
NC_014960_4 4.139|1378363|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1378363-1378396 34 NC_020275 Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong1, complete sequence 96788-96821 10 0.706
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 NC_022533 Plautia stali symbiont plasmid pPstS1 DNA, complete genome 15554-15587 10 0.706
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 NZ_CP045339 Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence 1677605-1677638 10 0.706
NC_014960_4 4.190|1381753|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1381753-1381787 35 NZ_CP048283 Rhizobium leguminosarum bv. viciae 248 plasmid pRle248c, complete sequence 220164-220198 10 0.714
NC_014960_4 4.192|1381885|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1381885-1381917 33 NZ_CP054621 Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence 1031177-1031209 10 0.697
NC_014960_4 4.221|1383812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1383812-1383845 34 NC_002137 Lactococcus lactis cremoris NIZO B40 plasmid pNZ4000, complete sequence 15009-15042 10 0.706
NC_014960_8 8.62|3141935|35|NC_014960|CRISPRCasFinder,PILER-CR 3141935-3141969 35 NZ_CP019362 Borrelia turicatae 91E135 isolate Oz1 plasmid cp31, complete sequence 8061-8095 10 0.714
NC_014960_8 8.87|3143764|36|NC_014960|CRISPRCasFinder,PILER-CR 3143764-3143799 36 GU071095 Synechococcus phage S-SM2, complete genome 84150-84185 10 0.722
NC_014960_8 8.111|3145520|37|NC_014960|CRISPRCasFinder,PILER-CR 3145520-3145556 37 NZ_CP007795 Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence 377503-377539 10 0.73
NC_014960_1 1.3|184468|38|NC_014960|CRISPRCasFinder,CRT,PILER-CR 184468-184505 38 NZ_CP050125 Rhodococcus erythropolis strain KB1 plasmid plas1, complete sequence 145738-145775 11 0.711
NC_014960_1 1.3|184468|38|NC_014960|CRISPRCasFinder,CRT,PILER-CR 184468-184505 38 NZ_CP017304 Rhodococcus sp. YL-1 plasmid pYLL2 sequence 143757-143794 11 0.711
NC_014960_1 1.3|184468|38|NC_014960|CRISPRCasFinder,CRT,PILER-CR 184468-184505 38 NZ_CP042915 Rhodococcus qingshengii strain RL1 plasmid unnamed2 417700-417737 11 0.711
NC_014960_4 4.64|1373390|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1373390-1373423 34 MK388689 Pantoea phage vB_PagM_LIET2, complete genome 51828-51861 11 0.676
NC_014960_4 4.93|1375312|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1375312-1375346 35 MK448861 Streptococcus phage Javan174, complete genome 6020-6054 11 0.686
NC_014960_4 4.120|1377106|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1377106-1377139 34 NZ_CP042262 Litoreibacter sp. LN3S51 plasmid unnamed1, complete sequence 147640-147673 11 0.676
NC_014960_4 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1379835-1379868 34 NC_020062 Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence 541283-541316 11 0.676
NC_014960_4 4.167|1380228|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1380228-1380261 34 NZ_CP004000 Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13f, complete sequence 49897-49930 11 0.676
NC_014960_4 4.167|1380228|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1380228-1380261 34 NZ_KX029332 Klebsiella pneumoniae strain Kp84/11 plasmid unnamed, complete sequence 206494-206527 11 0.676
NC_014960_4 4.188|1381620|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1381620-1381654 35 NZ_CP038636 Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence 1126002-1126036 11 0.686
NC_014960_8 8.111|3145520|37|NC_014960|CRISPRCasFinder,PILER-CR 3145520-3145556 37 NC_013855 Azospirillum sp. B510 plasmid pAB510a, complete sequence 314323-314359 11 0.703
NC_014960_4 4.62|1373258|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1373258-1373291 34 NZ_LR594660 Variovorax sp. PBL-H6 plasmid 2 601763-601796 12 0.647
NC_014960_4 4.62|1373258|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1373258-1373291 34 NZ_LR594667 Variovorax sp. SRS16 plasmid 2 236393-236426 12 0.647
NC_014960_4 4.62|1373258|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1373258-1373291 34 NZ_LR594690 Variovorax sp. WDL1 plasmid 2 239369-239402 12 0.647
NC_014960_4 4.62|1373258|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR 1373258-1373291 34 NZ_LR594672 Variovorax sp. PBL-E5 plasmid 2 236393-236426 12 0.647

1. spacer 4.3|1369337|31|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030222 (Salmonella enterica strain SA20021456 plasmid pSA20021456.3, complete sequence) position: , mismatch: 7, identity: 0.774

atgttttccctccctgattgatcagattcca	CRISPR spacer
atgttatccctccctgatttatcaaggtaaa	Protospacer
***** ************* ****.. *  *

2. spacer 4.18|1370328|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029997 (Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.2, complete sequence) position: , mismatch: 7, identity: 0.788

atttttcctccatttcatcagttcctgatagag--	CRISPR spacer
atatttcctccatttcatcggttc--gatgggatc	Protospacer
** ****************.****  ***.*..  

3. spacer 4.18|1370328|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to CP053334 (Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

atttttcctccatttcatcagttcctgatagag--	CRISPR spacer
atatttcctccatttcatcggttc--gatgggatc	Protospacer
** ****************.****  ***.*..  

4. spacer 4.19|1370393|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 7, identity: 0.794

aagccgcaacgcgcctcgcgcccgcccgttccaa	CRISPR spacer
gcgccgcaacgcgccacgcgcccgcgcgtcgcca	Protospacer
. ************* ********* ***. * *

5. spacer 4.81|1374513|31|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018781 (Ochrobactrum pituitosum strain AA2 plasmid pOAAA2, complete sequence) position: , mismatch: 7, identity: 0.774

atttcatcgccggtttcaaagtcaacgcaag	CRISPR spacer
cggtcatcgtcggtatcaaagtcaacgccgg	Protospacer
   ******.**** ************* .*

6. spacer 4.160|1379769|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007000 (Campylobacter fetus subsp. venerealis cfvi03/293 plasmid pCfviMP1, complete sequence) position: , mismatch: 7, identity: 0.794

gcacttttgatttcatcatctgtagc-agtgcgct	CRISPR spacer
ccacttttgatttcatcttttgtagcttgtgtgg-	Protospacer
 **************** *.******  ***.*  

7. spacer 4.160|1379769|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014569 (Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp1, complete sequence) position: , mismatch: 7, identity: 0.794

gcacttttgatttcatcatctgtagc-agtgcgct	CRISPR spacer
ccacttttgatttcatcttttgtagcttgtgtgg-	Protospacer
 **************** *.******  ***.*  

8. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 7, identity: 0.794

tttgttgccgttcccattgccattgccatttgca	CRISPR spacer
atcgctgccgttcccgttgccattgccattcccg	Protospacer
 *.*.**********.**************. *.

9. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.794

tttgttgccgttcccattgccattgccatttgca	CRISPR spacer
atcattgccattgccattgccattgccattgcca	Protospacer
 *..*****.** *****************  **

10. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054047 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.794

tttgttgccgttcccattgccattgccatttgca	CRISPR spacer
gatattgccattgccattgccattgccattgcca	Protospacer
  *.*****.** *****************  **

11. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to GU943061 (Uncultured phage MedDCM-OCT-S04-C846 genomic sequence) position: , mismatch: 7, identity: 0.794

tttgttgccgttcccattgccattgccatttgca-	CRISPR spacer
cttgttgccgtttccattgccgttg-gacttgcgc	Protospacer
.***********.********.***  *.****. 

12. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to GU943082 (Uncultured phage MedDCM-OCT-S11-C561 genomic sequence) position: , mismatch: 7, identity: 0.794

tttgttgccgttcccattgccattgccatttgca-	CRISPR spacer
cttgttgccgtttccattgccgttg-gacttgcgc	Protospacer
.***********.********.***  *.****. 

13. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to JX519267 (Uncultured Mediterranean phage MEDS2 group fosmid MedDCM-OCT-S19-C1, complete sequence) position: , mismatch: 7, identity: 0.794

tttgttgccgttcccattgccattgccatttgca-	CRISPR spacer
cttgttgccgtttccattgccgttg-gacttgcgc	Protospacer
.***********.********.***  *.****. 

14. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to JX519264 (Uncultured Mediterranean phage MEDS2 group fosmid MedDCM-OCT-S14-C1, complete sequence) position: , mismatch: 7, identity: 0.794

tttgttgccgttcccattgccattgccatttgca-	CRISPR spacer
cttgttgccgtttccattgccgttg-gacttgcgc	Protospacer
.***********.********.***  *.****. 

15. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to GU943058 (Uncultured phage MedDCM-OCT-S04-C507 genomic sequence) position: , mismatch: 7, identity: 0.794

tttgttgccgttcccattgccattgccatttgca-	CRISPR spacer
cttgttgccgtttccattgccgttg-gacttgcgc	Protospacer
.***********.********.***  *.****. 

16. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to GU943053 (Uncultured phage MedDCM-OCT-S04-C148 genomic sequence) position: , mismatch: 7, identity: 0.794

tttgttgccgttcccattgccattgccatttgca-	CRISPR spacer
cttgttgccgtttccattgccgttg-gacttgcgc	Protospacer
.***********.********.***  *.****. 

17. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to GU943081 (Uncultured phage MedDCM-OCT-S11-C349 genomic sequence) position: , mismatch: 7, identity: 0.794

tttgttgccgttcccattgccattgccatttgca-	CRISPR spacer
cttgttgccgtttccattgccgttg-gacttgcgc	Protospacer
.***********.********.***  *.****. 

18. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to GU943051 (Uncultured phage MedDCM-OCT-S01-C29 genomic sequence) position: , mismatch: 7, identity: 0.794

tttgttgccgttcccattgccattgccatttgca-	CRISPR spacer
cttgttgccgtttccattgccgttg-gacttgcgc	Protospacer
.***********.********.***  *.****. 

19. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to GU943060 (Uncultured phage MedDCM-OCT-S04-C714 genomic sequence) position: , mismatch: 7, identity: 0.794

tttgttgccgttcccattgccattgccatttgca-	CRISPR spacer
cttgttgccgtttccattgccgttg-gacttgcgc	Protospacer
.***********.********.***  *.****. 

20. spacer 4.163|1379967|31|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to AP014180 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C67-MedDCM-OCT-S37-C48, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.774

gttgtttcggttaataaggttctgcattatt	CRISPR spacer
gttgttttggataataaggttctagatgctc	Protospacer
*******.** ************. **  *.

21. spacer 4.16|1370198|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030933 (Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence) position: , mismatch: 8, identity: 0.758

aatcgttatcgtgccgttgtccgttctcatgaa	CRISPR spacer
aatcgtgatcgtgccgttctccgtatatttgat	Protospacer
****** *********** ***** . . *** 

22. spacer 4.28|1370994|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to KU737345 (Bacillus phage Juglone, complete genome) position: , mismatch: 8, identity: 0.765

gcgaatattacgccatgagcctttagc---gtttggt	CRISPR spacer
gttaatattactccatgagccattagcccagtct---	Protospacer
*. ******** ********* *****   **.*   

23. spacer 4.28|1370994|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NC_031100 (Bacillus phage Phrodo, complete genome) position: , mismatch: 8, identity: 0.765

gcgaatattacgccatgagcctttagc---gtttggt	CRISPR spacer
gttaatattactccatgagccattagcccagtct---	Protospacer
*. ******** ********* *****   **.*   

24. spacer 4.62|1373258|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025513 (Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

ggcgcgc-ggttctcgtcgtcagccgttgcaattt	CRISPR spacer
-acatgctgcttctcttcggcagccgttgcaattc	Protospacer
 .*..** * ***** *** **************.

25. spacer 4.79|1374382|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to MK450421 (Streptomyces phage Vash, complete genome) position: , mismatch: 8, identity: 0.771

tcttgcggctgtgacacgacttgcataatggttgt	CRISPR spacer
tcttcgtcttgtgacacgacttgcacaatgcttga	Protospacer
****    .****************.**** *** 

26. spacer 4.80|1374449|32|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 8, identity: 0.75

gtacttcactgcaggctcaacccaggccgtca	CRISPR spacer
aagcgttgctccaggctcaacccaggccgtct	Protospacer
. .* *..** ******************** 

27. spacer 4.80|1374449|32|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to MG732930 (Enterobacter phage Ec_L1, complete genome) position: , mismatch: 8, identity: 0.75

gtacttcactgcaggctcaacccaggccgtca	CRISPR spacer
aaacatgcttgcaagctcaacccaagccgtca	Protospacer
. ** *  .****.**********.*******

28. spacer 4.81|1374513|31|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NC_048182 (Edwardsiella virus pEt-SU, complete genome) position: , mismatch: 8, identity: 0.742

atttcatcgccggtttcaaagtcaacgcaag	CRISPR spacer
aaggcatcgccgttttcaaagtcaacaatat	Protospacer
*   ******** *************.  * 

29. spacer 4.86|1374844|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 8, identity: 0.765

caaggcggcacgggcgctgctgcggttgtatcga-	CRISPR spacer
atgggctgcacgggcgctgctgcggtt-tcccgcc	Protospacer
  .*** ******************** * .**  

30. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015038 (Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence) position: , mismatch: 8, identity: 0.765

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
agcacctgcttgctctggtcgttccagccgtcgg	Protospacer
 .* ********* ** *************   *

31. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015032 (Burkholderia cenocepacia strain 842 plasmid pBcn842-1, complete sequence) position: , mismatch: 8, identity: 0.765

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
agcacctgcttgctctggtcgttccagccgtcgg	Protospacer
 .* ********* ** *************   *

32. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020740 ([Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence) position: , mismatch: 8, identity: 0.765

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
aaaacctgcttgctctggtcgttccagccgtctg	Protospacer
 *  ********* ** *************  .*

33. spacer 4.117|1376910|33|NC_014960|CRISPRCasFinder,CRT matches to MG696114 (Proteus phage phiP4-3, complete genome) position: , mismatch: 8, identity: 0.758

tcgggtcactgttgctggcgatatttttgaatc	CRISPR spacer
tggttttcctgttgctgacgttatttttgaatt	Protospacer
* *  *. *********.** ***********.

34. spacer 4.117|1376910|33|NC_014960|CRISPRCasFinder,CRT matches to MK295204 (Shigella phage vB_SdyM_006, complete genome) position: , mismatch: 8, identity: 0.758

tcgggtcactgttgctggcgatatttttgaatc	CRISPR spacer
tggttttcctgttgctgacgttatttttgaatt	Protospacer
* *  *. *********.** ***********.

35. spacer 4.125|1377438|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045413 (Roseovarius sp. THAF8 plasmid pTHAF8_c, complete sequence) position: , mismatch: 8, identity: 0.765

tagtctgtaactgttcggcaaaaacgacatcctc	CRISPR spacer
cagtgactccctggtcggcaaagacgacatcctc	Protospacer
.***   *  *** ********.***********

36. spacer 4.125|1377438|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045395 (Roseovarius sp. THAF27 plasmid pTHAF27_b, complete sequence) position: , mismatch: 8, identity: 0.765

tagtctgtaactgttcggcaaaaacgacatcctc	CRISPR spacer
cagtgactccctggtcggcaaagacgacatcctc	Protospacer
.***   *  *** ********.***********

37. spacer 4.131|1377832|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to MN694219 (Marine virus AFVG_250M758, complete genome) position: , mismatch: 8, identity: 0.765

tcactgcac---tgttcgcagctttgtcctgtgcagt	CRISPR spacer
---atggacaggcgttcgctgctttgtcctttgcagt	Protospacer
    ** **   .****** ********** ******

38. spacer 4.138|1378297|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to MN694219 (Marine virus AFVG_250M758, complete genome) position: , mismatch: 8, identity: 0.765

tcactgcac---tgttcgcagctttgtcctgtgcagt	CRISPR spacer
---atggacaggcgttcgctgctttgtcctttgcagt	Protospacer
    ** **   .****** ********** ******

39. spacer 4.156|1379505|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to AP014180 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C67-MedDCM-OCT-S37-C48, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.758

ttgttgtttcggttaataaggttctgcattatt	CRISPR spacer
ctgttgttttggataataaggttctagatgctc	Protospacer
.********.** ************. **  *.

40. spacer 4.169|1380362|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039693 (Agrobacterium larrymoorei strain CFBP5473 plasmid pAlCFBP5473, complete sequence) position: , mismatch: 8, identity: 0.758

gcacagcaagcacatcttgcgcccagatctcgg	CRISPR spacer
gaacatcaagcacatcttgcggccagactcggt	Protospacer
* *** *************** *****... * 

41. spacer 4.206|1382812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX009059 (Pseudomonas syringae pv. actinidiae strain RT685 plasmid pMG1_RT685, complete sequence) position: , mismatch: 8, identity: 0.765

caatcatctcaacgacttcaggactgtcaacggt	CRISPR spacer
aaacaatcccaaggacttcaggactgtcacctgg	Protospacer
 **. ***.*** **************** * * 

42. spacer 4.206|1382812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NC_014390 (Butyrivibrio proteoclasticus B316 plasmid pCY186, complete sequence) position: , mismatch: 8, identity: 0.765

caatcatctcaacgacttcaggactgtcaacggt	CRISPR spacer
caatcatctctacgacttcaagacgtttgtcgga	Protospacer
********** *********.***  *.. *** 

43. spacer 4.2|1369271|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to MN693382 (Marine virus AFVG_25M315, complete genome) position: , mismatch: 9, identity: 0.735

tcatttcaatctcctttctagttcttcataaaga	CRISPR spacer
ttttttcaatctcctttcaagttcatcaaactcc	Protospacer
*. *************** ***** *** *    

44. spacer 4.36|1371526|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 9, identity: 0.727

caaaaagcgttggcaaagtttgagttgtccgtt	CRISPR spacer
aggatgggttttgcaaagtttgagttgaccgtt	Protospacer
 ..* .*  ** *************** *****

45. spacer 4.36|1371526|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 9, identity: 0.727

caaaaagcgttggcaaagtttgagttgtccgtt	CRISPR spacer
aggatgggttttgcaaagtttgagttgaccgtt	Protospacer
 ..* .*  ** *************** *****

46. spacer 4.49|1372396|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to LR026976 (Bacillus pumilus isolate 1 genome assembly, plasmid: p576) position: , mismatch: 9, identity: 0.735

ctcgttcatattatgttcctcccgtttactcaaa	CRISPR spacer
acttttcatttaatgttcctcccgtttacttatt	Protospacer
 .. ***** * ******************.*  

47. spacer 4.49|1372396|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to CP027117 (Bacillus phage EZ-2018a, complete genome) position: , mismatch: 9, identity: 0.735

ctcgttcatattatgttcctcccgtttactcaaa	CRISPR spacer
cctatacataatatgttcctcctgtttactttta	Protospacer
*...* **** ***********.*******.  *

48. spacer 4.77|1374251|32|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051473 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10DE, complete sequence) position: , mismatch: 9, identity: 0.719

cctgatagcggtcgtcttctgcttccggaggg	CRISPR spacer
gggcatcgcggtcgtcttctacttccgcaacg	Protospacer
    ** *************.****** *. *

49. spacer 4.77|1374251|32|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030276 (Rhodobacter sphaeroides 2.4.1 plasmid pDE, complete sequence) position: , mismatch: 9, identity: 0.719

cctgatagcggtcgtcttctgcttccggaggg	CRISPR spacer
gggcatcgcggtcgtcttctacttccgcaacg	Protospacer
    ** *************.****** *. *

50. spacer 4.77|1374251|32|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015289 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid a, complete sequence) position: , mismatch: 9, identity: 0.719

cctgatagcggtcgtcttctgcttccggaggg	CRISPR spacer
gggcatcgcggtcgtcttctacttccgcaacg	Protospacer
    ** *************.****** *. *

51. spacer 4.77|1374251|32|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014276 (Martelella sp. AD-3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cctgatagcggtcgtcttctgcttccggaggg	CRISPR spacer
cgacatagcggtcgtcttcggcatccgtcagc	Protospacer
*   *************** ** ****  .* 

52. spacer 4.77|1374251|32|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015212 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid a, complete sequence) position: , mismatch: 9, identity: 0.719

cctgatagcggtcgtcttctgcttccggaggg	CRISPR spacer
gggcatcgcggtcgtcttctacttccgcaacg	Protospacer
    ** *************.****** *. *

53. spacer 4.86|1374844|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 9, identity: 0.735

caaggcggcacgggcgctgctgcggttgtatcga-	CRISPR spacer
atgggctgcgcgggcgctgctgcggtt-tcccgcc	Protospacer
  .*** **.***************** * .**  

54. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

55. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

56. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

57. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

58. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

59. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

60. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

61. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

62. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

63. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

64. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

65. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

66. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

67. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

68. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

69. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

70. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

71. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

72. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

73. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

74. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

75. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

76. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

77. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

78. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

79. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

80. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

81. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

82. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

83. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

84. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

85. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

86. spacer 4.90|1375111|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

cactcctgcttgcgcttgtcgttccagccgaacg	CRISPR spacer
cctgtcggattgcgcttgccgttcccgccgaact	Protospacer
* . .* * *********.****** ******* 

87. spacer 4.127|1377569|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT591899 (Neisseria gonorrhoeae strain WHO G plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.743

gtacgacccctacggtgcggcagccgatctgctgt	CRISPR spacer
gaacggccgctacggtgcggcagccgaaaccgtct	Protospacer
* ***.** ******************  .  * *

88. spacer 4.127|1377569|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NC_014105 (Neisseria gonorrhoeae plasmid pEP5289, complete sequence) position: , mismatch: 9, identity: 0.743

gtacgacccctacggtgcggcagccgatctgctgt	CRISPR spacer
gaacggccgctacggtgcggcagccgaaaccgtct	Protospacer
* ***.** ******************  .  * *

89. spacer 4.127|1377569|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT591912 (Neisseria gonorrhoeae strain WHO N plasmid 3, complete sequence) position: , mismatch: 9, identity: 0.743

gtacgacccctacggtgcggcagccgatctgctgt	CRISPR spacer
gaacggccgctacggtgcggcagccgaaaccgtct	Protospacer
* ***.** ******************  .  * *

90. spacer 4.127|1377569|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045833 (Neisseria gonorrhoeae strain AUSMDU00010541 plasmid pAUSMDU00010541_01, complete sequence) position: , mismatch: 9, identity: 0.743

gtacgacccctacggtgcggcagccgatctgctgt	CRISPR spacer
gaacggccgctacggtgcggcagccgaaaccgtct	Protospacer
* ***.** ******************  .  * *

91. spacer 4.153|1379305|36|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015232 (Epibacterium mobile F1926 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.75

tttgccgccgatgttgcagcaccggatattaccgcc-----	CRISPR spacer
tttgcagcagatgttgcagcaccgg-----actgcgggtgt	Protospacer
***** ** ****************     **.**      

92. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.735

tttgttgccgttcccattgccattgccatttgca	CRISPR spacer
gccattgccattgccattgccattgccattgccg	Protospacer
 ...*****.** *****************  *.

93. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054047 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

tttgttgccgttcccattgccattgccatttgca	CRISPR spacer
gccattgccattgccattgccattgccattgcta	Protospacer
 ...*****.** *****************  .*

94. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to MT408532 (Synechococcus phage SynMITS9220M01, complete genome) position: , mismatch: 9, identity: 0.735

tttgttgccgttcccattgccattgccatttgca	CRISPR spacer
accattgccgttgccattaccattgccattaccg	Protospacer
 ...******** *****.***********  *.

95. spacer 4.169|1380362|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY000074 (Agrobacterium larrymoorei strain CFBP5481 plasmid pTi_CFBP5481, complete sequence) position: , mismatch: 9, identity: 0.727

gcacagcaagcacatcttgcgcccagatctcgg	CRISPR spacer
gaacatcaagcacatcttgcggccaggctcggt	Protospacer
* *** *************** ****.... * 

96. spacer 4.192|1381885|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 9, identity: 0.727

gagacagccctcccgcccctgcgcggctggatg	CRISPR spacer
agcgccgaactgccgaccctgcgcggctggatg	Protospacer
.. .* *  ** *** *****************

97. spacer 4.192|1381885|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029209 (Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence) position: , mismatch: 9, identity: 0.727

gagacagccctcccgcccctgcgcggctggatg	CRISPR spacer
gagacagccctccagcgcctgcgcaaaatcaag	Protospacer
************* ** *******..    * *

98. spacer 4.194|1382016|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NC_016108 (Methylomicrobium alcaliphilum 20Z plasmid MEALZ_p, complete sequence) position: , mismatch: 9, identity: 0.735

----acaatggaacggacagagatatttttgcgaaatc	CRISPR spacer
gtttatttt----cggacagagaaattttggcgaaatc	Protospacer
    *.  *    ********** ***** ********

99. spacer 4.211|1383145|34|NC_014960|CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 9, identity: 0.735

gcaggcgatcaggatgctggcggt----gcattactac	CRISPR spacer
gcgggcgatcaggttgctggcggtgatcgtatcg----	Protospacer
**.********** **********    *.**..    

100. spacer 4.212|1383211|34|NC_014960|CRISPRCasFinder,CRT matches to NZ_CP026539 (Desulfovibrio carbinolicus strain DSM 3852 plasmid pDCAR1, complete sequence) position: , mismatch: 9, identity: 0.735

tccggctggccgcgctcctgggctgggacagtgt	CRISPR spacer
ccgggctggccgcgctcctggcccggggcgccgc	Protospacer
.* ****************** *.***.*. .*.

101. spacer 4.221|1383812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016700 (Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence) position: , mismatch: 9, identity: 0.735

tggtttgggaaggtgctatgggtagtatagcatt	CRISPR spacer
aaggtgaagaagctgctgtgggtagtatagcact	Protospacer
 .* * ..**** ****.**************.*

102. spacer 4.221|1383812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to LC316979 (Lactococcus garvieae plasmid pNUF18 DNA, complete sequence, strain: NUF18) position: , mismatch: 9, identity: 0.735

tggtttgggaaggtgctatgggtagtatagcatt	CRISPR spacer
aaggtgaagaagctgctgtgggtagtatagcact	Protospacer
 .* * ..**** ****.**************.*

103. spacer 4.221|1383812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to LC316980 (Lactococcus garvieae plasmid pNUF462 DNA, complete sequence, strain: NUF462) position: , mismatch: 9, identity: 0.735

tggtttgggaaggtgctatgggtagtatagcatt	CRISPR spacer
aaggtgaagaagctgctgtgggtagtatagcact	Protospacer
 .* * ..**** ****.**************.*

104. spacer 4.221|1383812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to LC316981 (Lactococcus garvieae plasmid pNs15sousui29 DNA, complete sequence, strain: Ns15sousui29) position: , mismatch: 9, identity: 0.735

tggtttgggaaggtgctatgggtagtatagcatt	CRISPR spacer
aaggtgaagaagctgctgtgggtagtatagcact	Protospacer
 .* * ..**** ****.**************.*

105. spacer 4.221|1383812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to LC205736 (Lactococcus garvieae plasmid pBSLG13015 DNA, complete sequence, strain: BSLG13015) position: , mismatch: 9, identity: 0.735

tggtttgggaaggtgctatgggtagtatagcatt	CRISPR spacer
aaggtgaagaagctgctgtgggtagtatagcact	Protospacer
 .* * ..**** ****.**************.*

106. spacer 4.221|1383812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG813924 (Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03P plasmid pLd10, complete sequence) position: , mismatch: 9, identity: 0.735

tggtttgggaaggtgctatgggtagtatagcatt	CRISPR spacer
aaggtgaagaagctgctgtgggtagtatagcact	Protospacer
 .* * ..**** ****.**************.*

107. spacer 8.62|3141935|35|NC_014960|CRISPRCasFinder,PILER-CR matches to NZ_CP028888 (Borrelia turcica IST7 plasmid cp33, complete sequence) position: , mismatch: 9, identity: 0.743

agccgataggcacttttttgaatttgatatcctca	CRISPR spacer
tatcaataggctctattttgaatttgatatcgcta	Protospacer
 ..*.****** ** **************** ..*

108. spacer 3.14|758008|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040764 (Paracoccus sp. 2251 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.714

aaatacaggcgcaggacttcttcaacgcgccacac	CRISPR spacer
aggcgcaggcgcaggacttcatcaacgtgctgacc	Protospacer
*....*************** ******.**..  *

109. spacer 3.60|761367|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NC_049445 (Acinetobacter phage AbTZA1, complete genome) position: , mismatch: 10, identity: 0.714

gacgtgggtggtggtggaaaacgtggatggattgc	CRISPR spacer
gccactactggtgttgaaaaacgtggatggatttt	Protospacer
* *.. . ***** **.**************** .

110. spacer 3.62|761511|37|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to MN657156 (Sporosarcina sp. strain ANT_H38 plasmid pA38H4, complete sequence) position: , mismatch: 10, identity: 0.73

ccgagac--ctggcaacgttgtggttgccggtaactccg	CRISPR spacer
--gatgcggctgccaacgttgtggttgccggtcacagga	Protospacer
  ** .*  *** ******************* **   .

111. spacer 4.12|1369935|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 10, identity: 0.706

cgtgtactctaaccagcgcaccgccgccaccttt	CRISPR spacer
ccacgatacttaccagcgcaccgccgcgacctgc	Protospacer
*    *. ** **************** **** .

112. spacer 4.12|1369935|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010990 (Pseudonocardia sp. EC080625-04 plasmid pFRP1-1, complete sequence) position: , mismatch: 10, identity: 0.706

cgtgtactctaaccagcgcaccgccgccaccttt	CRISPR spacer
ccacgatacttaccagcgcaccgccgcgacctgc	Protospacer
*    *. ** **************** **** .

113. spacer 4.12|1369935|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 10, identity: 0.706

cgtgtactctaaccagcgcaccgccgccaccttt	CRISPR spacer
ccacgatacttaccagcgcaccgccgcgacctgc	Protospacer
*    *. ** **************** **** .

114. spacer 4.62|1373258|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011515 (Mitsuaria sp. 7 plasmid, complete sequence) position: , mismatch: 10, identity: 0.706

ggcgcgcggttctcgtcgtcagccgttgcaattt	CRISPR spacer
cgatgacggttctcgtcgtcagctgttccaggtc	Protospacer
 *   .*****************.*** **. *.

115. spacer 4.94|1375379|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to MH629685 (Synechococcus virus S-PRM1, complete genome) position: , mismatch: 10, identity: 0.706

caggacatattgagaacatcaaaggtactcttca	CRISPR spacer
caatgtccattcaaaacatcaaaggtactcttgc	Protospacer
**. .. .*** *.******************  

116. spacer 4.112|1376574|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to KX119176 (Helicobacter phage Pt1846U, complete genome) position: , mismatch: 10, identity: 0.714

aatagcaagaacactactacaatcaaaaaggctaa	CRISPR spacer
gcgtgcaagaatactaccacaatcaaaaaaggata	Protospacer
.   *******.*****.***********.*   *

117. spacer 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050093 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence) position: , mismatch: 10, identity: 0.714

aaagcctgcatgatggcatcgcggttggcggcata	CRISPR spacer
ggaccctgcatgacggcatcgcggtttgcctggca	Protospacer
..* *********.************ **   ..*

118. spacer 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050082 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence) position: , mismatch: 10, identity: 0.714

aaagcctgcatgatggcatcgcggttggcggcata	CRISPR spacer
ggaccctgcatgacggcatcgcggtttgcctggca	Protospacer
..* *********.************ **   ..*

119. spacer 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050099 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence) position: , mismatch: 10, identity: 0.714

aaagcctgcatgatggcatcgcggttggcggcata	CRISPR spacer
ggaccctgcatgacggcatcgcggtttgcctggca	Protospacer
..* *********.************ **   ..*

120. spacer 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NC_008384 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence) position: , mismatch: 10, identity: 0.714

aaagcctgcatgatggcatcgcggttggcggcata	CRISPR spacer
ggaccctgcatgacggcatcgcggtttgcctggca	Protospacer
..* *********.************ **   ..*

121. spacer 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049732 (Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence) position: , mismatch: 10, identity: 0.714

aaagcctgcatgatggcatcgcggttggcggcata	CRISPR spacer
ggaccctgcatgacggcatcgcggtttgcctggca	Protospacer
..* *********.************ **   ..*

122. spacer 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053441 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence) position: , mismatch: 10, identity: 0.714

aaagcctgcatgatggcatcgcggttggcggcata	CRISPR spacer
ggaccctgcatgacggcatcgcggtttgcctggca	Protospacer
..* *********.************ **   ..*

123. spacer 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048282 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248d, complete sequence) position: , mismatch: 10, identity: 0.714

aaagcctgcatgatggcatcgcggttggcggcata	CRISPR spacer
ggaccctgcatgacggcatcgcggtttgcttggca	Protospacer
..* *********.************ **   ..*

124. spacer 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053208 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence) position: , mismatch: 10, identity: 0.714

aaagcctgcatgatggcatcgcggttggcggcata	CRISPR spacer
ggaccctgcatgacggcatcgcggtttgcctggca	Protospacer
..* *********.************ **   ..*

125. spacer 4.137|1378230|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 10, identity: 0.714

aaagcctgcatgatggcatcgcggttggcggcata	CRISPR spacer
ggaccctgcatgacggcatcgcggtttgcctggca	Protospacer
..* *********.************ **   ..*

126. spacer 4.139|1378363|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NC_020275 (Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong1, complete sequence) position: , mismatch: 10, identity: 0.706

gagcatcgctgaccgcatccgcgcagtcctgcac	CRISPR spacer
cgaaaccgatgaccgcagccgcgcagtcctaccg	Protospacer
 .. *.** ******** ************.*  

127. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NC_022533 (Plautia stali symbiont plasmid pPstS1 DNA, complete genome) position: , mismatch: 10, identity: 0.706

tttgttgccgttcccattgccattgccatttgca	CRISPR spacer
ataattgccattgccattgccattgccatgatat	Protospacer
 * .*****.** ****************     

128. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 10, identity: 0.706

tttgttgccgttcccattgccattgccatttgca	CRISPR spacer
ctgatggccgttaccattcccattgccattaaac	Protospacer
.* .* ****** ***** *********** .  

129. spacer 4.190|1381753|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048283 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248c, complete sequence) position: , mismatch: 10, identity: 0.714

tatccgcagaccattgcccatgcgcgggacgtgtt	CRISPR spacer
catgcgcagaccattgcccattcgcgccctgttcg	Protospacer
.** ***************** ****   .** . 

130. spacer 4.192|1381885|33|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 10, identity: 0.697

gagacagccctcccgcccctgcgcggctggatg	CRISPR spacer
cgcgccgccctcccgctgctgcgcggctgggcc	Protospacer
 . .* **********. ************.. 

131. spacer 4.221|1383812|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NC_002137 (Lactococcus lactis cremoris NIZO B40 plasmid pNZ4000, complete sequence) position: , mismatch: 10, identity: 0.706

tggtttgggaaggtgctatgggtagtatagcatt	CRISPR spacer
aaggggaagaagctgctgtgggtagtatagcact	Protospacer
 .*   ..**** ****.**************.*

132. spacer 8.62|3141935|35|NC_014960|CRISPRCasFinder,PILER-CR matches to NZ_CP019362 (Borrelia turicatae 91E135 isolate Oz1 plasmid cp31, complete sequence) position: , mismatch: 10, identity: 0.714

agccgataggcacttttttgaatttgatatcctca	CRISPR spacer
agccgataagcacttttttgtatttgcaacaaaag	Protospacer
********.*********** *****  *.    .

133. spacer 8.87|3143764|36|NC_014960|CRISPRCasFinder,PILER-CR matches to GU071095 (Synechococcus phage S-SM2, complete genome) position: , mismatch: 10, identity: 0.722

tgaaatcgttaatttgatgagaatcaacaaaacaat	CRISPR spacer
tggcggagttaatttgaagagaatcaataaaactca	Protospacer
**. .  ********** *********.*****   

134. spacer 8.111|3145520|37|NC_014960|CRISPRCasFinder,PILER-CR matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 10, identity: 0.73

ttggccttcctggtcggtgacggcaacactaaacgtc	CRISPR spacer
tgggcgttcctggacggtgacggcaacatccacttcc	Protospacer
* *** ******* **************.. * . .*

135. spacer 1.3|184468|38|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050125 (Rhodococcus erythropolis strain KB1 plasmid plas1, complete sequence) position: , mismatch: 11, identity: 0.711

cttagtcggggcgaaggtcgagttcttcgacaagcgcc	CRISPR spacer
cgtagtcagggcgaaggtcgagttctgcggtgggaagt	Protospacer
* *****.****************** **....* . .

136. spacer 1.3|184468|38|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017304 (Rhodococcus sp. YL-1 plasmid pYLL2 sequence) position: , mismatch: 11, identity: 0.711

cttagtcggggcgaaggtcgagttcttcgacaagcgcc	CRISPR spacer
cgtagtcagggcgaaggtcgagttctgcggtgggaagt	Protospacer
* *****.****************** **....* . .

137. spacer 1.3|184468|38|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042915 (Rhodococcus qingshengii strain RL1 plasmid unnamed2) position: , mismatch: 11, identity: 0.711

cttagtcggggcgaaggtcgagttcttcgacaagcgcc	CRISPR spacer
cgtagtcagggcgaaggtcgagttctgcggtgggaagt	Protospacer
* *****.****************** **....* . .

138. spacer 4.64|1373390|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to MK388689 (Pantoea phage vB_PagM_LIET2, complete genome) position: , mismatch: 11, identity: 0.676

aggcggttatttcatcccgcaaaacctttatggt	CRISPR spacer
caacggtgattccatcccgcaaaacctgccgctt	Protospacer
 ..**** ***.*************** .    *

139. spacer 4.93|1375312|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to MK448861 (Streptococcus phage Javan174, complete genome) position: , mismatch: 11, identity: 0.686

gccagatttgacacccaaacaccgcatcaagtacg	CRISPR spacer
gtattttttgacaaccaaacaccgcaacaagcttt	Protospacer
*.    ******* ************ ****. . 

140. spacer 4.120|1377106|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042262 (Litoreibacter sp. LN3S51 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

ggcagtacgcaggatgacgggagtgactgtcagt	CRISPR spacer
acggaaaagcaggatgacgggagcgactggcacg	Protospacer
.  .. * ***************.***** **  

141. spacer 4.161|1379835|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 11, identity: 0.676

tttgttgccgttcccattgccattgccatttgca	CRISPR spacer
gttgttgccattcccgttgccattgttaccgctg	Protospacer
 ********.*****.*********..*..  ..

142. spacer 4.167|1380228|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP004000 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13f, complete sequence) position: , mismatch: 11, identity: 0.676

tgttgccgttgattacctgccctacacggtcgat	CRISPR spacer
gtaccctgttgattacctgctcgacacggtctgg	Protospacer
   . *.*************.* ******** . 

143. spacer 4.167|1380228|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX029332 (Klebsiella pneumoniae strain Kp84/11 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

tgttgccgttgattacctgccctacacggtcgat	CRISPR spacer
gtaccctgttgattacctgctcgacacggtctgg	Protospacer
   . *.*************.* ******** . 

144. spacer 4.188|1381620|35|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.686

aatcatcatgtcccagccgtcgttcaagatttcaa	CRISPR spacer
tgacatcatgtcccagcagtcgtccaagcctgggg	Protospacer
 . ************** *****.**** .*  ..

145. spacer 8.111|3145520|37|NC_014960|CRISPRCasFinder,PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 11, identity: 0.703

ttggccttcctggtcggtgacggcaacactaaacgtc	CRISPR spacer
cgggccttcctggacggggacggcaacatccattacc	Protospacer
. *********** *** **********.. * ...*

146. spacer 4.62|1373258|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 12, identity: 0.647

ggcgcgcggttctcgtcgtcagccgttgcaattt	CRISPR spacer
cagccgcggtgctcgacgtcagccgttgagggcc	Protospacer
 .  ****** **** ************ .. ..

147. spacer 4.62|1373258|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 12, identity: 0.647

ggcgcgcggttctcgtcgtcagccgttgcaattt	CRISPR spacer
cagccgcggtgctcgacgtcagccgttgagggcc	Protospacer
 .  ****** **** ************ .. ..

148. spacer 4.62|1373258|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 12, identity: 0.647

ggcgcgcggttctcgtcgtcagccgttgcaattt	CRISPR spacer
cagccgcggtgctcgacgtcagccgttgagggcc	Protospacer
 .  ****** **** ************ .. ..

149. spacer 4.62|1373258|34|NC_014960|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 12, identity: 0.647

ggcgcgcggttctcgtcgtcagccgttgcaattt	CRISPR spacer
cagccgcggtgctcgacgtcagccgttgagggcc	Protospacer
 .  ****** **** ************ .. ..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 711810 : 722788 6 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_2 1577978 : 1587412 10 Streptococcus_phage(14.29%) NA NA
DBSCAN-SWA_3 2853381 : 2875262 20 Indivirus(33.33%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage