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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_004567 Lactobacillus plantarum WCFS1, complete genome 1 crisprs csa3,DinG,cas3,DEDDh 0 0 6 0
NC_006375 Lactobacillus plantarum WCFS1, complete genome 0 crisprs NA 0 0 0 0
NC_006377 Lactobacillus plantarum WCFS1, complete genome 0 crisprs csa3 0 0 0 0
NC_006376 Lactobacillus plantarum WCFS1, complete genome 0 crisprs NA 0 0 0 0

Results visualization

1. NC_004567
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_004567_1 2763066-2763151 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 321921 : 408741 86 Bacillus_virus(16.67%) protease,bacteriocin,tRNA NA
DBSCAN-SWA_2 571807 : 664810 109 Lactobacillus_phage(34.04%) tRNA,terminase,capsid,tail,plate,protease,portal,integrase,head attL 570101:570116|attR 604538:604553
DBSCAN-SWA_3 1083488 : 1090553 6 Escherichia_phage(50.0%) integrase attL 1083083:1083096|attR 1097474:1097487
DBSCAN-SWA_4 1300477 : 1310325 9 Lactobacillus_phage(87.5%) NA NA
DBSCAN-SWA_5 2163937 : 2218340 68 Lactobacillus_phage(52.94%) capsid,tail,terminase,portal,holin,integrase,head attL 2204682:2204703|attR 2218518:2218539
DBSCAN-SWA_6 2421448 : 2429959 9 Synechococcus_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage