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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_016810 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344, complete genome 4 crisprs WYL,DinG,cas3,DEDDh,cas14j,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,RT 0 19 11 0
NC_017720 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 plasmid pSLT_SL1344, complete sequence 0 crisprs cas14j 0 0 1 0
NC_017719 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 plasmid pRSF1010_SL1344, complete sequence 0 crisprs NA 0 0 0 0
NC_017718 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 plasmid pCol1B9_SL1344, complete sequence 0 crisprs DEDDh 0 0 0 0

Results visualization

1. NC_016810
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_016810_1 2908153-2908262 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_016810_2 3099172-3099567 TypeI-E I-E
6 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_016810_3 3099580-3100159 TypeI-E I-E
9 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_016810_4 3116291-3117723 TypeI-E I-E
23 spacers
cas3,cas8e,cse2gr11,cas7

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_016810_4 4.6|3116626|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116626-3116657 32 NZ_CP030204 Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence 130783-130814 2 0.938
NC_016810_4 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117541-3117572 32 CP023013 Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence 1387347-1387378 5 0.844
NC_016810_4 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117541-3117572 32 NZ_CP022766 Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence 1461559-1461590 5 0.844
NC_016810_4 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117541-3117572 32 CP023015 Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence 599340-599371 5 0.844
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NC_019849 Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence 850282-850313 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NC_003078 Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence 887728-887759 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP019586 Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence 856045-856076 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NC_017326 Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence 835457-835488 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP021799 Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence 953948-953979 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NC_017323 Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence 431895-431926 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP009146 Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence 843687-843718 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NC_018701 Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence 833486-833517 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP021828 Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence 457962-457993 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP021802 Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence 1502459-1502490 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP021820 Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence 1188725-1188756 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP021831 Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence 1094940-1094971 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP021823 Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence 574071-574102 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP021814 Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence 758103-758134 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP021795 Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence 92938-92969 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP021810 Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence 1622461-1622492 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP021806 Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence 174090-174121 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP021218 Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence 996227-996258 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP026527 Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence 856529-856560 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP019484 Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence 1026857-1026888 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP019487 Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence 801217-801248 6 0.812
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NC_020560 Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence 887731-887762 6 0.812
NC_016810_4 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117541-3117572 32 NC_012528 Deinococcus deserti VCD115 plasmid 3, complete sequence 121315-121346 6 0.812
NC_016810_3 3.4|3099793|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder 3099793-3099824 32 NZ_CP024773 Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence 29048-29079 7 0.781
NC_016810_3 3.4|3099793|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder 3099793-3099824 32 NZ_CP041075 Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence 142294-142325 7 0.781
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP030829 Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence 360377-360408 7 0.781
NC_016810_4 4.16|3117236|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117236-3117267 32 NC_011366 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence 208454-208485 7 0.781
NC_016810_4 4.16|3117236|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117236-3117267 32 NC_017958 Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence 449563-449594 7 0.781
NC_016810_4 4.16|3117236|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117236-3117267 32 NZ_CP035001 Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence 167100-167131 7 0.781
NC_016810_4 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117541-3117572 32 NZ_CP044078 Paracoccus yeei strain FDAARGOS_643 plasmid unnamed1, complete sequence 135155-135186 7 0.781
NC_016810_4 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117541-3117572 32 NZ_CP031081 Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence 195902-195933 7 0.781
NC_016810_4 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117541-3117572 32 NZ_CP032322 Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence 581076-581107 7 0.781
NC_016810_4 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117541-3117572 32 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 122557-122588 7 0.781
NC_016810_4 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117541-3117572 32 NZ_CP032346 Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence 529537-529568 7 0.781
NC_016810_4 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117541-3117572 32 NZ_CP034156 Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence 327444-327475 7 0.781
NC_016810_2 2.2|3099262|32|NC_016810|CRISPRCasFinder,CRT 3099262-3099293 32 MN855803 Bacteriophage sp. isolate 108, partial genome 10057-10088 8 0.75
NC_016810_3 3.3|3099732|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder 3099732-3099763 32 NZ_CP016179 Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence 203354-203385 8 0.75
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NC_012811 Methylorubrum extorquens AM1 megaplasmid, complete sequence 43093-43124 8 0.75
NC_016810_4 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116748-3116779 32 NZ_CP053442 Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence 152052-152083 8 0.75
NC_016810_4 4.9|3116809|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116809-3116840 32 NZ_CP028348 Novosphingobium sp. THN1 plasmid pTHN, complete sequence 1098771-1098802 8 0.75
NC_016810_4 4.9|3116809|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116809-3116840 32 NZ_CP014128 Pantoea vagans strain FDAARGOS_160 plasmid unnamed3, complete sequence 160189-160220 8 0.75
NC_016810_4 4.9|3116809|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116809-3116840 32 NC_014561 Pantoea vagans C9-1 plasmid pPag1, complete sequence 156443-156474 8 0.75
NC_016810_4 4.9|3116809|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116809-3116840 32 NC_010553 Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence 137983-138014 8 0.75
NC_016810_4 4.12|3116992|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116992-3117023 32 LQ277707 Sequence 2 from Patent WO2016071503 12422-12453 8 0.75
NC_016810_4 4.12|3116992|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116992-3117023 32 LZ998055 JP 2017534684-A/2: Phage Therapy 12422-12453 8 0.75
NC_016810_4 4.13|3117053|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117053-3117084 32 CP001770 Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence 145771-145802 8 0.75
NC_016810_2 2.8|3099263|33|NC_016810|PILER-CR 3099263-3099295 33 MN855803 Bacteriophage sp. isolate 108, partial genome 10057-10089 9 0.727
NC_016810_3 3.6|3099915|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder 3099915-3099946 32 MT162468 Synechococcus phage S-H25, complete genome 69929-69960 9 0.719
NC_016810_4 4.9|3116809|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116809-3116840 32 NZ_CP045722 Pantoea eucalypti strain LMG 24197 plasmid unnamed2, complete sequence 332-363 9 0.719
NC_016810_4 4.9|3116809|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116809-3116840 32 NZ_CP022519 Pantoea vagans strain FBS135 plasmid pPant3, complete sequence 62976-63007 9 0.719
NC_016810_4 4.9|3116809|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3116809-3116840 32 NZ_CP028351 Pantoea vagans strain PV989 plasmid pPV989-167, complete sequence 144976-145007 9 0.719
NC_016810_4 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117114-3117145 32 MN062720 Microbacterium phage FuzzBuster, complete genome 19374-19405 9 0.719
NC_016810_4 4.15|3117175|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117175-3117206 32 MN694645 Marine virus AFVG_250M761, complete genome 31050-31081 9 0.719
NC_016810_4 4.16|3117236|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117236-3117267 32 DQ674738 Aeromonas phage phiO18P, complete genome 15707-15738 9 0.719
NC_016810_4 4.16|3117236|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117236-3117267 32 NZ_CP031166 Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence 380725-380756 9 0.719
NC_016810_4 4.16|3117236|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117236-3117267 32 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 153785-153816 9 0.719
NC_016810_4 4.17|3117297|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117297-3117328 32 MN693046 Marine virus AFVG_25M413, complete genome 4323-4354 9 0.719
NC_016810_4 4.17|3117297|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117297-3117328 32 MN693008 Marine virus AFVG_117M9, complete genome 4316-4347 9 0.719
NC_016810_4 4.20|3117480|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117480-3117511 32 NZ_CP021372 Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence 353298-353329 9 0.719
NC_016810_4 4.20|3117480|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117480-3117511 32 AM749121 Streptococcus phage M102 complete genome 7893-7924 9 0.719
NC_016810_4 4.20|3117480|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117480-3117511 32 NC_012884 Streptococcus phage M102, complete genome 7893-7924 9 0.719
NC_016810_2 2.1|3099201|32|NC_016810|CRISPRCasFinder,CRT 3099201-3099232 32 NC_016113 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence 1151729-1151760 10 0.688
NC_016810_2 2.1|3099201|32|NC_016810|CRISPRCasFinder,CRT 3099201-3099232 32 NC_017585 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence 661429-661460 10 0.688
NC_016810_3 3.6|3099915|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder 3099915-3099946 32 LN681539 Clostridium phage phiCD505, complete genome 8933-8964 10 0.688
NC_016810_3 3.6|3099915|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder 3099915-3099946 32 JX145341 Clostridium phage phiMMP02, complete genome 8932-8963 10 0.688
NC_016810_3 3.6|3099915|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder 3099915-3099946 32 NC_011398 Clostridium phage phiCD27, complete genome 8924-8955 10 0.688
NC_016810_3 3.6|3099915|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder 3099915-3099946 32 NC_048642 Clostridium phage CDKM9, complete genome 8871-8902 10 0.688
NC_016810_3 3.6|3099915|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder 3099915-3099946 32 KX228400 Clostridium phage CDKM15, complete genome 9066-9097 10 0.688
NC_016810_4 4.1|3116320|32|NC_016810|CRISPRCasFinder,CRT 3116320-3116351 32 NZ_CP054615 Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence 146919-146950 10 0.688
NC_016810_4 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117114-3117145 32 NZ_CP019257 Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence 20006-20037 10 0.688
NC_016810_4 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117114-3117145 32 NZ_CP019274 Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence 9024-9055 10 0.688
NC_016810_4 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117114-3117145 32 NZ_CP019275 Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence 27130-27161 10 0.688
NC_016810_4 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117114-3117145 32 NZ_CP019279 Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence 19363-19394 10 0.688
NC_016810_4 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117114-3117145 32 NZ_CP019246 Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence 23427-23458 10 0.688
NC_016810_4 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117114-3117145 32 NC_049342 Escherichia phage 500465-1, complete genome 24342-24373 10 0.688
NC_016810_4 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117114-3117145 32 KY271398 Klebsiella phage 4 LV-2017, complete genome 28240-28271 10 0.688
NC_016810_4 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117114-3117145 32 CP025900 Escherichia phage sp., complete genome 24342-24373 10 0.688
NC_016810_4 4.19|3117419|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117419-3117450 32 NZ_CP030264 Ensifer adhaerens strain Corn53 plasmid AB, complete sequence 1134787-1134818 10 0.688
NC_016810_4 4.16|3117236|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117236-3117267 32 NZ_CP054036 Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence 234768-234799 11 0.656
NC_016810_4 4.16|3117236|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR 3117236-3117267 32 NZ_CP022568 Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence 299431-299462 11 0.656

1. spacer 4.6|3116626|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030204 (Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence) position: , mismatch: 2, identity: 0.938

accgataaacaaccgcatagcctctttcgttt	CRISPR spacer
accgataaacaatcgcatggcctctttcgttt	Protospacer
************.*****.*************

2. spacer 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-agcgccacatggcccaccggcaccacccgatc	CRISPR spacer
cagcggc-tatgccccagcggcaccacccgatc	Protospacer
 **** * .*** **** ***************

3. spacer 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-agcgccacatggcccaccggcaccacccgatc	CRISPR spacer
cagcggc-tatgccccagcggcaccacccgatc	Protospacer
 **** * .*** **** ***************

4. spacer 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-agcgccacatggcccaccggcaccacccgatc	CRISPR spacer
cagcggc-tatgccccagcggcaccacccgatc	Protospacer
 **** * .*** **** ***************

5. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

6. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

7. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

8. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

9. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

10. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

11. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

12. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

13. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

14. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

15. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

16. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

17. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

18. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

19. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

20. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

21. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

22. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

23. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

24. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

25. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

26. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.************* 

27. spacer 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NC_012528 (Deinococcus deserti VCD115 plasmid 3, complete sequence) position: , mismatch: 6, identity: 0.812

--agcgccacatggcccaccggcaccacccgatc	CRISPR spacer
ccaacgc--catggccgacccgcaccacccgacc	Protospacer
  *.***  ******* *** ***********.*

28. spacer 3.4|3099793|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  * 

29. spacer 3.4|3099793|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  * 

30. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030829 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence) position: , mismatch: 7, identity: 0.781

tatttcgccttcggcactgacgtcaccgtcaa	CRISPR spacer
tacgtcgccttcggcaatgtcgtcaccgaaga	Protospacer
**. ************ ** ********  .*

31. spacer 4.16|3117236|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 7, identity: 0.781

---gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
ttcgagc---atgaccggatcggcgctggtgccga	Protospacer
   *.**   **** *************.*****.

32. spacer 4.16|3117236|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.781

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
ggcggcggtgaaaggatcggcggtgatgccgg	Protospacer
**  .* .**** ********* *********

33. spacer 4.16|3117236|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 7, identity: 0.781

---gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
ttcgagc---atgaccggatcggcgctggtgccga	Protospacer
   *.**   **** *************.*****.

34. spacer 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044078 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacccgatc--	CRISPR spacer
gccgccacatggcccaccgccaccagc--gtcgg	Protospacer
. ***************** ***** *  .**  

35. spacer 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031081 (Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacccgatc--	CRISPR spacer
gccgccacatggcccaccgccaccagc--gtcgg	Protospacer
. ***************** ***** *  .**  

36. spacer 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacc-cgatc	CRISPR spacer
cccgccacatggcccagcggctccatcgccat-	Protospacer
  ************** **** ***.* * ** 

37. spacer 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacc-cgatc	CRISPR spacer
cccgccacatggcccagcggctccatcgccat-	Protospacer
  ************** **** ***.* * ** 

38. spacer 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacc-cgatc	CRISPR spacer
cccgccacatggcccagcggctccatcgccat-	Protospacer
  ************** **** ***.* * ** 

39. spacer 4.21|3117541|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacccgatc	CRISPR spacer
agccccacatggcgcaccggcacggcactagc	Protospacer
*** ********* ********* .* * * *

40. spacer 2.2|3099262|32|NC_016810|CRISPRCasFinder,CRT matches to MN855803 (Bacteriophage sp. isolate 108, partial genome) position: , mismatch: 8, identity: 0.75

gcgaaatagtggggaaaaacccctggttaacc	CRISPR spacer
tttcaatattggggaaaaacccctcgttacct	Protospacer
 .  **** *************** **** *.

41. spacer 3.3|3099732|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP016179 (Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggtaatttctcatctaacagcct-----gtacgcctc	CRISPR spacer
ggtaatttcgcatcaaacagccttattagtat-----	Protospacer
********* **** ********     ***.     

42. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

tatttcgccttcggcactgacgtcaccgtcaa	CRISPR spacer
tcgaacaccttcgtcacggacgtcaccgtcga	Protospacer
*    *.****** *** ************.*

43. spacer 4.8|3116748|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053442 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence) position: , mismatch: 8, identity: 0.75

tatttcgccttcggcactgacgtcaccgtcaa	CRISPR spacer
cattgcgccttcggcacggacgtccaccagaa	Protospacer
.*** ************ ******  *   **

44. spacer 4.9|3116809|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 8, identity: 0.75

-gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
cagcggatcc-ttgccggtatagaccagcgtat	Protospacer
 . ** .*.* ********************  

45. spacer 4.9|3116809|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014128 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
gaattttacgttgccggtgtagaccagtgtca	Protospacer
*   . * **********.********.****

46. spacer 4.9|3116809|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NC_014561 (Pantoea vagans C9-1 plasmid pPag1, complete sequence) position: , mismatch: 8, identity: 0.75

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
gaattttacgttgccggtgtagaccagtgtca	Protospacer
*   . * **********.********.****

47. spacer 4.9|3116809|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 8, identity: 0.75

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
gatccggacgttgccggtattgaacagcgtcc	Protospacer
* . **  ************ ** ******* 

48. spacer 4.12|3116992|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to LQ277707 (Sequence 2 from Patent WO2016071503) position: , mismatch: 8, identity: 0.75

----gctcatgtcaaacgccatcagcgttccggcat	CRISPR spacer
aaaggct----gcaaacgccaatagcgttccggcaa	Protospacer
    ***     ********* .************ 

49. spacer 4.12|3116992|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to LZ998055 (JP 2017534684-A/2: Phage Therapy) position: , mismatch: 8, identity: 0.75

----gctcatgtcaaacgccatcagcgttccggcat	CRISPR spacer
aaaggct----gcaaacgccaatagcgttccggcaa	Protospacer
    ***     ********* .************ 

50. spacer 4.13|3117053|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to CP001770 (Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence) position: , mismatch: 8, identity: 0.75

aatcgccagcctcggaaatattccatcctccg	CRISPR spacer
ggttgccagccccggaagtattccatctccca	Protospacer
..*.*******.*****.*********..**.

51. spacer 2.8|3099263|33|NC_016810|PILER-CR matches to MN855803 (Bacteriophage sp. isolate 108, partial genome) position: , mismatch: 9, identity: 0.727

cgcgaaatagtggggaaaaacccctggttaacc	CRISPR spacer
ttttcaatattggggaaaaacccctcgttacct	Protospacer
. .  **** *************** **** *.

52. spacer 3.6|3099915|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder matches to MT162468 (Synechococcus phage S-H25, complete genome) position: , mismatch: 9, identity: 0.719

tcccattcaccaacaacaatatcgccctgcaa----	CRISPR spacer
ccccaatcaccaacaataatatcgt----cagtgtt	Protospacer
.**** **********.*******.    **.    

53. spacer 4.9|3116809|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045722 (Pantoea eucalypti strain LMG 24197 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
aaacttgacgttgccggtatagatcagcgtca	Protospacer
.   .   ***************.********

54. spacer 4.9|3116809|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022519 (Pantoea vagans strain FBS135 plasmid pPant3, complete sequence) position: , mismatch: 9, identity: 0.719

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
aaacttgacgttgccggtatagatcagcgtca	Protospacer
.   .   ***************.********

55. spacer 4.9|3116809|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028351 (Pantoea vagans strain PV989 plasmid pPV989-167, complete sequence) position: , mismatch: 9, identity: 0.719

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
aaattttacgttgccggtgtagaccagtgtca	Protospacer
.   . * **********.********.****

56. spacer 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to MN062720 (Microbacterium phage FuzzBuster, complete genome) position: , mismatch: 9, identity: 0.719

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
tcctcctggacaggctgaccgttgacgatctg	Protospacer
     **..**** *********** ******

57. spacer 4.15|3117175|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to MN694645 (Marine virus AFVG_250M761, complete genome) position: , mismatch: 9, identity: 0.719

accggacaaatcttttttttcctgttcctgtt	CRISPR spacer
gcatcattaatcctttttttcctgttactgta	Protospacer
.*   *. ****.************* **** 

58. spacer 4.16|3117236|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to DQ674738 (Aeromonas phage phiO18P, complete genome) position: , mismatch: 9, identity: 0.719

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cagtttgctgaactgctcggcgctgatgccgg	Protospacer
 .*. .  ***** * ****************

59. spacer 4.16|3117236|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 9, identity: 0.719

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cctgacggtgaaccggtcggcgctgatgccgc	Protospacer
    ** .***** *.*************** 

60. spacer 4.16|3117236|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cagggcgtcgaactgatcggcgctcatgccgg	Protospacer
 .* .*  .**** ********** *******

61. spacer 4.17|3117297|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to MN693046 (Marine virus AFVG_25M413, complete genome) position: , mismatch: 9, identity: 0.719

ggtaaagccacaccattttttattgacctcgc	CRISPR spacer
tctgaaaccacaccattttttgttgaccctaa	Protospacer
  *.**.**************.******... 

62. spacer 4.17|3117297|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to MN693008 (Marine virus AFVG_117M9, complete genome) position: , mismatch: 9, identity: 0.719

ggtaaagccacaccattttttattgacctcgc	CRISPR spacer
tctgaaaccacaccattttttgttgaccctaa	Protospacer
  *.**.**************.******... 

63. spacer 4.20|3117480|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021372 (Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence) position: , mismatch: 9, identity: 0.719

tcgacgtggacgaggagttactcaaccgctgc	CRISPR spacer
gttcagtggacgaggagttcctcacccgcacc	Protospacer
 .   ************** **** ****  *

64. spacer 4.20|3117480|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to AM749121 (Streptococcus phage M102 complete genome) position: , mismatch: 9, identity: 0.719

tcgacgtggacgaggagttactcaaccgctgc	CRISPR spacer
ttgggctggaccaggagttactccaccgcctt	Protospacer
*.*.  ***** *********** *****. .

65. spacer 4.20|3117480|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NC_012884 (Streptococcus phage M102, complete genome) position: , mismatch: 9, identity: 0.719

tcgacgtggacgaggagttactcaaccgctgc	CRISPR spacer
ttgggctggaccaggagttactccaccgcctt	Protospacer
*.*.  ***** *********** *****. .

66. spacer 2.1|3099201|32|NC_016810|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcagcccttgtcgactgcggaacgcccct	CRISPR spacer
tccctcaccctcgtcgactgcggaccgcccgg	Protospacer
*.... .****.************ *****  

67. spacer 2.1|3099201|32|NC_016810|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcagcccttgtcgactgcggaacgcccct	CRISPR spacer
tccctcaccctcgtcgactgcggaccgcccgg	Protospacer
*.... .****.************ *****  

68. spacer 3.6|3099915|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*    

69. spacer 3.6|3099915|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*    

70. spacer 3.6|3099915|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*    

71. spacer 3.6|3099915|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*    

72. spacer 3.6|3099915|32|NC_016810|CRT,PILER-CR,CRISPRCasFinder matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*    

73. spacer 4.1|3116320|32|NC_016810|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

atcttcatattgcgtgacgctgccgatgaacg	CRISPR spacer
tgccggatatggcgtgacgatgccgatgatgt	Protospacer
  *.  **** ******** *********   

74. spacer 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019257 (Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

75. spacer 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019274 (Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

76. spacer 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019275 (Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

77. spacer 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019279 (Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

78. spacer 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

79. spacer 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NC_049342 (Escherichia phage 500465-1, complete genome) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

80. spacer 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to KY271398 (Klebsiella phage 4 LV-2017, complete genome) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

81. spacer 4.14|3117114|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to CP025900 (Escherichia phage sp., complete genome) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

82. spacer 4.19|3117419|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 10, identity: 0.688

gtggtggcctcaaataaattcgagcgctggag	CRISPR spacer
aaacttgcctcaaataaattcgcgcggtgttc	Protospacer
. . * **************** *** **   

83. spacer 4.16|3117236|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 11, identity: 0.656

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
atagactaggagcggatcggcgctgatcggaa	Protospacer
. . **** **.***************   ..

84. spacer 4.16|3117236|32|NC_016810|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 11, identity: 0.656

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
atagactaggagcggatcggcgctgatcggaa	Protospacer
. . **** **.***************   ..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 975147 : 983879 7 Dickeya_phage(14.29%) protease,transposase NA
DBSCAN-SWA_2 1033972 : 1132550 101 Salmonella_phage(44.64%) lysis,tRNA,protease,terminase,tail,portal,holin NA
DBSCAN-SWA_3 1921043 : 1927852 11 Salmonella_phage(33.33%) tail,integrase attL 1915906:1915928|attR 1925621:1925643
DBSCAN-SWA_4 2003302 : 2082646 102 Salmonella_phage(86.36%) head,lysis,protease,terminase,capsid,holin,tail,integrase,transposase,portal,plate attL 2009840:2009855|attR 2084269:2084284
DBSCAN-SWA_5 2168640 : 2179146 10 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_6 2247454 : 2256625 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_7 2276032 : 2342427 60 Salmonella_phage(28.57%) tail,lysis,holin NA
DBSCAN-SWA_8 2681301 : 2788863 112 Salmonella_phage(30.3%) head,tRNA,lysis,terminase,capsid,protease,holin,tail,integrase,transposase,portal attL 2705846:2705862|attR 2796767:2796783
DBSCAN-SWA_9 2811887 : 2891269 83 Salmonella_phage(69.49%) head,tRNA,lysis,terminase,capsid,tail,integrase,portal,plate attL 2878932:2878953|attR 2894256:2894277
DBSCAN-SWA_10 2894441 : 2900242 8 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_11 4439206 : 4459626 26 Burkholderia_phage(45.0%) tail,plate NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_017720
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 43673 : 52969 11 Escherichia_phage(28.57%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage