CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_015499	Thermodesulfobium narugense DSM 14796, complete sequence	3 crisprs	DinG,cas6,cas8b1,cas7,cas5,cas3,cas4,cas1,cas2,csx1,cas10,csm3gr7,csx19,csa3,PrimPol,csm5gr7,csm4gr5,csm2gr11,WYL	0	14	2	0

1. NC_015499

CRISPR-Cas detection and classification

Crispr_ID: NC_015499_1

• CRISPR_ID: NC_015499_1
• CRISPR_location: 807036-812677
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 84 spacers
• Cas_protein_info: cas2,cas1,cas4,cas3,cas5,cas7,cas8b1,cas6,csx1,cas10,csm3gr7,csx19

Consensus repeat of NC_015499_1

Consensus_repeat	Method
GTTTTTACGATACCTATGAGGAATTGAAAC	PILER-CR
GTTTTTACGATACCTATGAGGAATTGAAAC	CRISPRCasFinder
GTTTTTACGATACCTATGAGGAATTGAAAC	CRT

spacers of NC_015499_1

>1.1|807066|38|NC_015499|PILER-CR,CRISPRCasFinder,CRT
CAGGACGAATATAAAGAAGATAATCTCAGACATTGAGA
>1.2|807134|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT
CGCTATTCGCTCAAGCTCACTAGTCGACATAAGCC
>1.3|807199|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AAAAAAGAAATAAGTTTGTCTTCTTCTGAAATATC
>1.4|807264|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
CATTTCCATCTATACCAAGCCAGTTGTTCAGGAGTAA
>1.5|807331|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT
GCGTAAACTGTAATAAGTTTACACTCGTCGTCGT
>1.6|807395|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TGGGATGGTCTGGGTCCAGCCCACACCAATCCCAG
>1.7|807460|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
GCAGTTGGGACATGCGATGATGCCCACAATAATTTTT
>1.8|807527|40|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AATGACAATATAAATATTTTGTTTGATAGATTTGTCACAA
>1.9|807597|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TGTAATCGTTAATGATATTTTCAATATCGATTTCTAA
>1.10|807664|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AAAGTTCTTTTTATTTCTCTTACAAAGTCGTTATCGT
>1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AAATTTCTTTAAATTTTTTGATGTCTTCTGTTAC
>1.12|807795|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
GAAAGTATACGAAATACTTTCTGAATTGAAATTTCTC
>1.13|807862|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AGCTTTTTCACAAAAATTTTCATCATTTTATCCAC
>1.14|807927|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
GTAGAAGAAGCTGCTTGTCTTGGTTTCAAAACAACCA
>1.15|807994|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TGAATAAAGTGCTTGACAGAAAAAAAGAAAATGTAA
>1.16|808060|38|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TAATCTTGGAAGAACTGGTGGAGAAAGCACAGTTTCAG
>1.17|808128|38|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AGAAAGATTTACTGGTATTTCTGTTTTTGAAACTTTTT
>1.18|808196|38|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AGGAAAGTGTAAAAGACATATAAAACATCGTCCCTATA
>1.19|808264|38|NC_015499|PILER-CR,CRISPRCasFinder,CRT
CTAAGAAAGAACTCCCTCAACCCCCAAGATCACTACTA
>1.20|808332|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT
CAATTTTGTTATTTGGTTGTGTTACAATTGTTTTTT
>1.21|808398|38|NC_015499|PILER-CR,CRISPRCasFinder,CRT
GAACTCTATAATATAGGCGACATGACAATATATGTTGA
>1.22|808466|40|NC_015499|PILER-CR,CRISPRCasFinder,CRT
CTAAACAAGATATTAACGATATAGCAAATGCCTTAGTCCA
>1.23|808536|38|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AGTTCCTTGTCAGGGCAGGAAGTGTCCTGAAAAGGAAA
>1.24|808604|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TGGGTAAAACACTTGACAAGAAAAAAAGAAAAGAATA
>1.25|808671|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT
GTCGATAAGAAAAATTTATAAATATGAACAAAAA
>1.26|808735|40|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TATACGTCTTCTGACCATGACTGGCATGTGCATATATATG
>1.27|808805|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AAGGTAGCAACGTCTCCATTAACAAACCCTCATTGG
>1.28|808871|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
GGAGCGCAGTTGTGGTTTCGAACTCTTCTTCGTCCAG
>1.29|808938|40|NC_015499|PILER-CR,CRISPRCasFinder,CRT
ACGAGCGTGCAAGAAAGAAACCAAGATGGTGGTGCGGCTG
>1.30|809008|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT
ATGAAACTTTTAAAAAAGGAGTGATATAAATGATGA
>1.31|809074|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AAAGCAATGAAAGAATATAGAGAAATTTCACTTCAGA
>1.32|809141|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TCGGATACTTCAAGTTATATAAAAAATTTCTTTAA
>1.33|809206|38|NC_015499|PILER-CR,CRISPRCasFinder,CRT
GTTTTTGAAAAAACTGTAAAAGAACTTCTGAAAGGTTA
>1.34|809274|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TCTATTTTCTAATGCTGAAAAGGTATTTTCCCCTT
>1.35|809339|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
ACAGAAGAAATGAGATTAGCATTTAGAACTATTCAAA
>1.36|809406|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
ATCGTTCCCTTCACTATCAGATTTTGCAAATAGTTAT
>1.37|809473|38|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AGTCAATCTGGGTCAACAGCACCAGTTTTTTCAAATGA
>1.38|809541|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TTTCAAATCCGTCACAATAGAAAGGGTCTGCTCCA
>1.39|809606|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT
CAACATTTTTTTCTAACATTGCAATATTTATTTTA
>1.40|809671|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
CAGTTTTTTCAAAAATTAATTTCATTTTACTCCTTCC
>1.41|809738|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT
ACGAAAGAAGAGTATCAGGACCTCCTCGTCCTGA
>1.42|809802|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
ACACAGGCGCAAAATTCTTCAAATAGAGGCACTTCAA
>1.43|809869|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
GGACTAAATCCAGCACCCGGCCTTCTAGTAGATTTTG
>1.44|809936|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AAAGTCAATATAGGTACTATAAGCATATAATATATT
>1.45|810002|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
GTTGATATGTCTATATAGACTTGAAGCATATAATATA
>1.46|810069|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
CCGGCGATGTTGATGACCCGCAAAAAGAGGGGTTCGA
>1.47|810136|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AGAATACACGAGGGGGTTCTACCTTCCCTATTTTTTT
>1.48|810203|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT
GGGATTTTGAGGGGGTGCTCTCATATGAGAGACTCC
>1.49|810269|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AGTTTAATGCTGATAACCCATATACAAAAACGCTGA
>1.50|810335|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AGACTTCCTTGTCCTGCTTAGGCAGGCAGAAGAAGT
>1.51|810401|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT
GACGATAAGAAAAACTTATAAATATAAACAAAAAAA
>1.52|810467|38|NC_015499|PILER-CR,CRISPRCasFinder,CRT
CGCAAGTGAACTCCCTGAAAAATATCTAAGGGGGTTCC
>1.53|810535|39|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TGGGATGGTCTGGGTCCAGCCCACACCAATCCCAGTAAC
>1.54|810604|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
ATACTGTTATAAAGCGCTATTCACAATTACAAAGCGA
>1.55|810671|44|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TCATTTGCGCTCCGACGAAAGTCTTTTCATCGACGAAAACCCCC
>1.56|810745|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AACAATGTTGTAGGATAAGGAATTGTTCCATCCAA
>1.57|810810|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TGTTTTTTTTAAATACGAGCGTTTTTTAAGCAATTAG
>1.58|810877|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT
GCACTTTTCAAAGAACTTTTAATTATCAATACCA
>1.59|810941|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AAGATTTTCAGGGAGCTTTTTACGCAAGTGAACTCCC
>1.60|811008|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT
ATAATAGATGGTTCGTGCATTTTCCCGTCCTCTAA
>1.61|811073|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT
CAAAGAGGGAGTACAGGCAAATCCTCGCCCTCTTGA
>1.62|811139|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TGTCTAAGCTAAGAGTAAAATCTAAACTAGCATTAG
>1.63|811205|38|NC_015499|PILER-CR,CRISPRCasFinder,CRT
CGTTTCCAATAGTATTTGTTCCTGCAGGTAGTGGTTGA
>1.64|811273|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TTGCAGGCGATGCACAATCAGGCATTTATAAGTCAGG
>1.65|811340|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT
CATATATACTACCATAAATATGAGTATATATAAACA
>1.66|811406|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AGTAGAAAGCCATTTGATATAGGGGGGTCAATGTTTG
>1.67|811473|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT
GCTTTACAAAAAGAAACAGACCAAACCAATTTAGC
>1.68|811538|39|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AACTCTTCTTCATCCAGGAATTGGCCCTTTTTGAGCCAA
>1.69|811607|39|NC_015499|PILER-CR,CRISPRCasFinder,CRT
CTACAATGTTTTTTGCTGCTAATCAAATGCCTTATGCAT
>1.70|811676|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
ATAACAGCCCTAATACATTAGACATCTACAACGATAT
>1.71|811743|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TATTGATATCCTAACTGAGCAAAAATATTTTTAA
>1.72|811807|38|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TATTGCTTTTAGGGTTGTTTTTTTGTTTTTTGTTTTGT
>1.73|811875|38|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TCGTTCAAGATATATAGCCTAACAGATTATCTAAATGA
>1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TATATTTTTTATTTTTTTTATTATTATTATATATA
>1.75|812008|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TTTCAATCATGTCTCTTTGAACGTTGCCACCTAA
>1.76|812072|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AGATTAAAGTTTGTAAAGGAAACGTATACAAACAAA
>1.77|812138|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AAGGAAAGATATGGCATTGATGTACATACTATAAGA
>1.78|812204|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TTTTCAGATACATCAATACCATATAACATAATTTATA
>1.79|812271|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT
CTAAAATGGGCATGGTTTTTGAGCCTTGTTTACCACC
>1.80|812338|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TGGGATTGTTACAGAAGTAGAAGTAAGAGGGGATGA
>1.81|812404|40|NC_015499|PILER-CR,CRISPRCasFinder,CRT
TGTAATTGTTTAGTGCTTGTTCGTTTTCAATTAATTTTGA
>1.82|812474|39|NC_015499|PILER-CR,CRISPRCasFinder,CRT
AAGAACCTGTCTTTTTCTGTTGGTTCTTGTTCTTTTTCT
>1.83|812543|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT
ACACTTCTTTACCATCCACTAGGATGGCAAGTTGC
>1.84|812608|40|NC_015499|PILER-CR,CRISPRCasFinder,CRT
CATTTCCAGCGATACCAAGCCAATTGTTCAGGGGTAATAC

CRISPR arrays and Neighbor proteins around NC_015499_1

CRISPR arrays

The CRISPR arrays of NC_015499_1

>merge|NC_015499|1|807036-812677|PILER-CR,CRISPRCasFinder,CRT
GTTTTTACGATACCTATGAGGAATTGAAACCAGGACGAATATAAAGAAGATAATCTCAGACATTGAGAGTTTTTACGATACCTATGAGGAATTGAAACCGCTATTCGCTCAAGCTCACTAGTCGACATAAGCCGTTTTTACGATACCTATGAGGAATTGAAACAAAAAAGAAATAAGTTTGTCTTCTTCTGAAATATCGTTTTTACGATACCTATGAGGAATTGAAACCATTTCCATCTATACCAAGCCAGTTGTTCAGGAGTAAGTTTTTACGATACCTATGAGGAATTGAAACGCGTAAACTGTAATAAGTTTACACTCGTCGTCGTGTTTTTACGATACCTATGAGGAATTGAAACTGGGATGGTCTGGGTCCAGCCCACACCAATCCCAGGTTTTTACGATACCTATGAGGAATTGAAACGCAGTTGGGACATGCGATGATGCCCACAATAATTTTTGTTTTTACGATACCTATGAGGAATTGAAACAATGACAATATAAATATTTTGTTTGATAGATTTGTCACAAGTTTTTACGATACCTATGAGGAATTGAAACTGTAATCGTTAATGATATTTTCAATATCGATTTCTAAGTTTTTACGATACCTATGAGGAATTGAAACAAAGTTCTTTTTATTTCTCTTACAAAGTCGTTATCGTGTTTTTACGATACCTATGAGGAATTGAAACAAATTTCTTTAAATTTTTTGATGTCTTCTGTTACGTTTTTACGATACCTATGAGGAATTGAAACGAAAGTATACGAAATACTTTCTGAATTGAAATTTCTCGTTTTTACGATACCTATGAGGAATTGAAACAGCTTTTTCACAAAAATTTTCATCATTTTATCCACGTTTTTACGATACCTATGAGGAATTGAAACGTAGAAGAAGCTGCTTGTCTTGGTTTCAAAACAACCAGTTTTTACGATACCTATGAGGAATTGAAACTGAATAAAGTGCTTGACAGAAAAAAAGAAAATGTAAGTTTTTACGATACCTATGAGGAATTGAAACTAATCTTGGAAGAACTGGTGGAGAAAGCACAGTTTCAGGTTTTTACGATACCTATGAGGAATTGAAACAGAAAGATTTACTGGTATTTCTGTTTTTGAAACTTTTTGTTTTTACGATACCTATGAGGAATTGAAACAGGAAAGTGTAAAAGACATATAAAACATCGTCCCTATAGTTTTTACGATACCTATGAGGAATTGAAACCTAAGAAAGAACTCCCTCAACCCCCAAGATCACTACTAGTTTTTACGATACCTATGAGGAATTGAAACCAATTTTGTTATTTGGTTGTGTTACAATTGTTTTTTGTTTTTACGATACCTATGAGGAATTGAAACGAACTCTATAATATAGGCGACATGACAATATATGTTGAGTTTTTACGATACCTATGAGGAATTGAAACCTAAACAAGATATTAACGATATAGCAAATGCCTTAGTCCAGTTTTTACGATACCTATGAGGAATTGAAACAGTTCCTTGTCAGGGCAGGAAGTGTCCTGAAAAGGAAAGTTTTTACGATACCTATGAGGAATTGAAACTGGGTAAAACACTTGACAAGAAAAAAAGAAAAGAATAGTTTTTACGATACCTATGAGGAATTGAAACGTCGATAAGAAAAATTTATAAATATGAACAAAAAGTTTTTACGATACCTATGAGGAATTGAAACTATACGTCTTCTGACCATGACTGGCATGTGCATATATATGGTTTTTACGATACCTATGAGGAATTGAAACAAGGTAGCAACGTCTCCATTAACAAACCCTCATTGGGTTTTTACGATACCTATGAGGAATTGAAACGGAGCGCAGTTGTGGTTTCGAACTCTTCTTCGTCCAGGTTTTTACGATACCTATGAGGAATTGAAACACGAGCGTGCAAGAAAGAAACCAAGATGGTGGTGCGGCTGGTTTTTACGATACCTATGAGGAATTGAAACATGAAACTTTTAAAAAAGGAGTGATATAAATGATGAGTTTTTACGATACCTATGAGGAATTGAAACAAAGCAATGAAAGAATATAGAGAAATTTCACTTCAGAGTTTTTACGATACCTATGAGGAATTGAAACTCGGATACTTCAAGTTATATAAAAAATTTCTTTAAGTTTTTACGATACCTATGAGGAATTGAAACGTTTTTGAAAAAACTGTAAAAGAACTTCTGAAAGGTTAGTTTTTACGATACCTATGAGGAATTGAAACTCTATTTTCTAATGCTGAAAAGGTATTTTCCCCTTGTTTTTACGATACCTATGAGGAATTGAAACACAGAAGAAATGAGATTAGCATTTAGAACTATTCAAAGTTTTTACGATACCTATGAGGAATTGAAACATCGTTCCCTTCACTATCAGATTTTGCAAATAGTTATGTTTTTACGATACCTATGAGGAATTGAAACAGTCAATCTGGGTCAACAGCACCAGTTTTTTCAAATGAGTTTTTACGATACCTATGAGGAATTGAAACTTTCAAATCCGTCACAATAGAAAGGGTCTGCTCCAGTTTTTACGATACCTATGAGGAATTGAAACCAACATTTTTTTCTAACATTGCAATATTTATTTTAGTTTTTACGATACCTATGAGGAATTGAAACCAGTTTTTTCAAAAATTAATTTCATTTTACTCCTTCCGTTTTTACGATACCTATGAGGAATTGAAACACGAAAGAAGAGTATCAGGACCTCCTCGTCCTGAGTTTTTACGATACCTATGAGGAATTGAAACACACAGGCGCAAAATTCTTCAAATAGAGGCACTTCAAGTTTTTACGATACCTATGAGGAATTGAAACGGACTAAATCCAGCACCCGGCCTTCTAGTAGATTTTGGTTTTTACGATACCTATGAGGAATTGAAACAAAGTCAATATAGGTACTATAAGCATATAATATATTGTTTTTACGATACCTATGAGGAATTGAAACGTTGATATGTCTATATAGACTTGAAGCATATAATATAGTTTTTACGATACCTATGAGGAATTGAAACCCGGCGATGTTGATGACCCGCAAAAAGAGGGGTTCGAGTTTTTACGATACCTATGAGGAATTGAAACAGAATACACGAGGGGGTTCTACCTTCCCTATTTTTTTGTTTTTACGATACCTATGAGGAATTGAAACGGGATTTTGAGGGGGTGCTCTCATATGAGAGACTCCGTTTTTACGATACCTATGAGGAATTGAAACAGTTTAATGCTGATAACCCATATACAAAAACGCTGAGTTTTTACGATACCTATGAGGAATTGAAACAGACTTCCTTGTCCTGCTTAGGCAGGCAGAAGAAGTGTTTTTACGATACCTATGAGGAATTGAAACGACGATAAGAAAAACTTATAAATATAAACAAAAAAAGTTTTTACGATACCTATGAGGAATTGAAACCGCAAGTGAACTCCCTGAAAAATATCTAAGGGGGTTCCGTTTTTACGATACCTATGAGGAATTGAAACTGGGATGGTCTGGGTCCAGCCCACACCAATCCCAGTAACGTTTTTACGATACCTATGAGGAATTGAAACATACTGTTATAAAGCGCTATTCACAATTACAAAGCGAGTTTTTACGATACCTATGAGGAATTGAAACTCATTTGCGCTCCGACGAAAGTCTTTTCATCGACGAAAACCCCCGTTTTTACGATACCTATGAGGAATTGAAACAACAATGTTGTAGGATAAGGAATTGTTCCATCCAAGTTTTTACGATACCTATGAGGAATTGAAACTGTTTTTTTTAAATACGAGCGTTTTTTAAGCAATTAGGTTTTTACGATACCTATGAGGAATTGAAACGCACTTTTCAAAGAACTTTTAATTATCAATACCAGTTTTTACGATACCTATGAGGAATTGAAACAAGATTTTCAGGGAGCTTTTTACGCAAGTGAACTCCCGTTTTTACGATACCTATGAGGAATTGAAACATAATAGATGGTTCGTGCATTTTCCCGTCCTCTAAGTTTTTACGATACCTATGAGGAATTGAAACCAAAGAGGGAGTACAGGCAAATCCTCGCCCTCTTGAGTTTTTACGATACCTATGAGGAATTGAAACTGTCTAAGCTAAGAGTAAAATCTAAACTAGCATTAGGTTTTTACGATACCTATGAGGAATTGAAACCGTTTCCAATAGTATTTGTTCCTGCAGGTAGTGGTTGAGTTTTTACGATACCTATGAGGAATTGAAACTTGCAGGCGATGCACAATCAGGCATTTATAAGTCAGGGTTTTTACGATACCTATGAGGAATTGAAACCATATATACTACCATAAATATGAGTATATATAAACAGTTTTTACGATACCTATGAGGAATTGAAACAGTAGAAAGCCATTTGATATAGGGGGGTCAATGTTTGGTTTTTACGATACCTATGAGGAATTGAAACGCTTTACAAAAAGAAACAGACCAAACCAATTTAGCGTTTTTACGATACCTATGAGGAATTGAAACAACTCTTCTTCATCCAGGAATTGGCCCTTTTTGAGCCAAGTTTTTACGATACCTATGAGGAATTGAAACCTACAATGTTTTTTGCTGCTAATCAAATGCCTTATGCATGTTTTTACGATACCTATGAGGAATTGAAACATAACAGCCCTAATACATTAGACATCTACAACGATATGTTTTTACGATACCTATGAGGAATTGAAACTATTGATATCCTAACTGAGCAAAAATATTTTTAAGTTTTTACGATACCTATGAGGAATTGAAACTATTGCTTTTAGGGTTGTTTTTTTGTTTTTTGTTTTGTGTTTTTACGATACCTATGAGGAATTGAAACTCGTTCAAGATATATAGCCTAACAGATTATCTAAATGAGTTTTTACGATACCTATGAGGAATTGAAACTATATTTTTTATTTTTTTTATTATTATTATATATAGTTTTTACGATACCTATGAGGAATTGAAACTTTCAATCATGTCTCTTTGAACGTTGCCACCTAAGTTTTTACGATACCTATGAGGAATTGAAACAGATTAAAGTTTGTAAAGGAAACGTATACAAACAAAGTTTTTACGATACCTATGAGGAATTGAAACAAGGAAAGATATGGCATTGATGTACATACTATAAGAGTTTTTACGATACCTATGAGGAATTGAAACTTTTCAGATACATCAATACCATATAACATAATTTATAGTTTTTACGATACCTATGAGGAATTGAAACCTAAAATGGGCATGGTTTTTGAGCCTTGTTTACCACCGTTTTTACGATACCTATGAGGAATTGAAACTGGGATTGTTACAGAAGTAGAAGTAAGAGGGGATGAGTTTTTACGATACCTATGAGGAATTGAAACTGTAATTGTTTAGTGCTTGTTCGTTTTCAATTAATTTTGAGTTTTTACGATACCTATGAGGAATTGAAACAAGAACCTGTCTTTTTCTGTTGGTTCTTGTTCTTTTTCTGTTTTTACGATACCTATGAGGAATTGAAACACACTTCTTTACCATCCACTAGGATGGCAAGTTGCGTTTTTACGATACCTATGAGGAATTGAAACCATTTCCAGCGATACCAAGCCAATTGTTCAGGGGTAATACGTTTTTACGATACCTATGAGGAATTGAAAC

>NC_015499|1|1|807036-812677|PILER-CR
GTTTTTACGATACCTATGAGGAATTGAAAC	CAGGACGAATATAAAGAAGATAATCTCAGACATTGAGA
GTTTTTACGATACCTATGAGGAATTGAAAC	CGCTATTCGCTCAAGCTCACTAGTCGACATAAGCC
GTTTTTACGATACCTATGAGGAATTGAAAC	AAAAAAGAAATAAGTTTGTCTTCTTCTGAAATATC
GTTTTTACGATACCTATGAGGAATTGAAAC	CATTTCCATCTATACCAAGCCAGTTGTTCAGGAGTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	GCGTAAACTGTAATAAGTTTACACTCGTCGTCGT
GTTTTTACGATACCTATGAGGAATTGAAAC	TGGGATGGTCTGGGTCCAGCCCACACCAATCCCAG
GTTTTTACGATACCTATGAGGAATTGAAAC	GCAGTTGGGACATGCGATGATGCCCACAATAATTTTT
GTTTTTACGATACCTATGAGGAATTGAAAC	AATGACAATATAAATATTTTGTTTGATAGATTTGTCACAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGTAATCGTTAATGATATTTTCAATATCGATTTCTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	AAAGTTCTTTTTATTTCTCTTACAAAGTCGTTATCGT
GTTTTTACGATACCTATGAGGAATTGAAAC	AAATTTCTTTAAATTTTTTGATGTCTTCTGTTAC
GTTTTTACGATACCTATGAGGAATTGAAAC	GAAAGTATACGAAATACTTTCTGAATTGAAATTTCTC
GTTTTTACGATACCTATGAGGAATTGAAAC	AGCTTTTTCACAAAAATTTTCATCATTTTATCCAC
GTTTTTACGATACCTATGAGGAATTGAAAC	GTAGAAGAAGCTGCTTGTCTTGGTTTCAAAACAACCA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGAATAAAGTGCTTGACAGAAAAAAAGAAAATGTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TAATCTTGGAAGAACTGGTGGAGAAAGCACAGTTTCAG
GTTTTTACGATACCTATGAGGAATTGAAAC	AGAAAGATTTACTGGTATTTCTGTTTTTGAAACTTTTT
GTTTTTACGATACCTATGAGGAATTGAAAC	AGGAAAGTGTAAAAGACATATAAAACATCGTCCCTATA
GTTTTTACGATACCTATGAGGAATTGAAAC	CTAAGAAAGAACTCCCTCAACCCCCAAGATCACTACTA
GTTTTTACGATACCTATGAGGAATTGAAAC	CAATTTTGTTATTTGGTTGTGTTACAATTGTTTTTT
GTTTTTACGATACCTATGAGGAATTGAAAC	GAACTCTATAATATAGGCGACATGACAATATATGTTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	CTAAACAAGATATTAACGATATAGCAAATGCCTTAGTCCA
GTTTTTACGATACCTATGAGGAATTGAAAC	AGTTCCTTGTCAGGGCAGGAAGTGTCCTGAAAAGGAAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGGGTAAAACACTTGACAAGAAAAAAAGAAAAGAATA
GTTTTTACGATACCTATGAGGAATTGAAAC	GTCGATAAGAAAAATTTATAAATATGAACAAAAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TATACGTCTTCTGACCATGACTGGCATGTGCATATATATG
GTTTTTACGATACCTATGAGGAATTGAAAC	AAGGTAGCAACGTCTCCATTAACAAACCCTCATTGG
GTTTTTACGATACCTATGAGGAATTGAAAC	GGAGCGCAGTTGTGGTTTCGAACTCTTCTTCGTCCAG
GTTTTTACGATACCTATGAGGAATTGAAAC	ACGAGCGTGCAAGAAAGAAACCAAGATGGTGGTGCGGCTG
GTTTTTACGATACCTATGAGGAATTGAAAC	ATGAAACTTTTAAAAAAGGAGTGATATAAATGATGA
GTTTTTACGATACCTATGAGGAATTGAAAC	AAAGCAATGAAAGAATATAGAGAAATTTCACTTCAGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TCGGATACTTCAAGTTATATAAAAAATTTCTTTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	GTTTTTGAAAAAACTGTAAAAGAACTTCTGAAAGGTTA
GTTTTTACGATACCTATGAGGAATTGAAAC	TCTATTTTCTAATGCTGAAAAGGTATTTTCCCCTT
GTTTTTACGATACCTATGAGGAATTGAAAC	ACAGAAGAAATGAGATTAGCATTTAGAACTATTCAAA
GTTTTTACGATACCTATGAGGAATTGAAAC	ATCGTTCCCTTCACTATCAGATTTTGCAAATAGTTAT
GTTTTTACGATACCTATGAGGAATTGAAAC	AGTCAATCTGGGTCAACAGCACCAGTTTTTTCAAATGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TTTCAAATCCGTCACAATAGAAAGGGTCTGCTCCA
GTTTTTACGATACCTATGAGGAATTGAAAC	CAACATTTTTTTCTAACATTGCAATATTTATTTTA
GTTTTTACGATACCTATGAGGAATTGAAAC	CAGTTTTTTCAAAAATTAATTTCATTTTACTCCTTCC
GTTTTTACGATACCTATGAGGAATTGAAAC	ACGAAAGAAGAGTATCAGGACCTCCTCGTCCTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	ACACAGGCGCAAAATTCTTCAAATAGAGGCACTTCAA
GTTTTTACGATACCTATGAGGAATTGAAAC	GGACTAAATCCAGCACCCGGCCTTCTAGTAGATTTTG
GTTTTTACGATACCTATGAGGAATTGAAAC	AAAGTCAATATAGGTACTATAAGCATATAATATATT
GTTTTTACGATACCTATGAGGAATTGAAAC	GTTGATATGTCTATATAGACTTGAAGCATATAATATA
GTTTTTACGATACCTATGAGGAATTGAAAC	CCGGCGATGTTGATGACCCGCAAAAAGAGGGGTTCGA
GTTTTTACGATACCTATGAGGAATTGAAAC	AGAATACACGAGGGGGTTCTACCTTCCCTATTTTTTT
GTTTTTACGATACCTATGAGGAATTGAAAC	GGGATTTTGAGGGGGTGCTCTCATATGAGAGACTCC
GTTTTTACGATACCTATGAGGAATTGAAAC	AGTTTAATGCTGATAACCCATATACAAAAACGCTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	AGACTTCCTTGTCCTGCTTAGGCAGGCAGAAGAAGT
GTTTTTACGATACCTATGAGGAATTGAAAC	GACGATAAGAAAAACTTATAAATATAAACAAAAAAA
GTTTTTACGATACCTATGAGGAATTGAAAC	CGCAAGTGAACTCCCTGAAAAATATCTAAGGGGGTTCC
GTTTTTACGATACCTATGAGGAATTGAAAC	TGGGATGGTCTGGGTCCAGCCCACACCAATCCCAGTAAC
GTTTTTACGATACCTATGAGGAATTGAAAC	ATACTGTTATAAAGCGCTATTCACAATTACAAAGCGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TCATTTGCGCTCCGACGAAAGTCTTTTCATCGACGAAAACCCCC
GTTTTTACGATACCTATGAGGAATTGAAAC	AACAATGTTGTAGGATAAGGAATTGTTCCATCCAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGTTTTTTTTAAATACGAGCGTTTTTTAAGCAATTAG
GTTTTTACGATACCTATGAGGAATTGAAAC	GCACTTTTCAAAGAACTTTTAATTATCAATACCA
GTTTTTACGATACCTATGAGGAATTGAAAC	AAGATTTTCAGGGAGCTTTTTACGCAAGTGAACTCCC
GTTTTTACGATACCTATGAGGAATTGAAAC	ATAATAGATGGTTCGTGCATTTTCCCGTCCTCTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	CAAAGAGGGAGTACAGGCAAATCCTCGCCCTCTTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGTCTAAGCTAAGAGTAAAATCTAAACTAGCATTAG
GTTTTTACGATACCTATGAGGAATTGAAAC	CGTTTCCAATAGTATTTGTTCCTGCAGGTAGTGGTTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TTGCAGGCGATGCACAATCAGGCATTTATAAGTCAGG
GTTTTTACGATACCTATGAGGAATTGAAAC	CATATATACTACCATAAATATGAGTATATATAAACA
GTTTTTACGATACCTATGAGGAATTGAAAC	AGTAGAAAGCCATTTGATATAGGGGGGTCAATGTTTG
GTTTTTACGATACCTATGAGGAATTGAAAC	GCTTTACAAAAAGAAACAGACCAAACCAATTTAGC
GTTTTTACGATACCTATGAGGAATTGAAAC	AACTCTTCTTCATCCAGGAATTGGCCCTTTTTGAGCCAA
GTTTTTACGATACCTATGAGGAATTGAAAC	CTACAATGTTTTTTGCTGCTAATCAAATGCCTTATGCAT
GTTTTTACGATACCTATGAGGAATTGAAAC	ATAACAGCCCTAATACATTAGACATCTACAACGATAT
GTTTTTACGATACCTATGAGGAATTGAAAC	TATTGATATCCTAACTGAGCAAAAATATTTTTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TATTGCTTTTAGGGTTGTTTTTTTGTTTTTTGTTTTGT
GTTTTTACGATACCTATGAGGAATTGAAAC	TCGTTCAAGATATATAGCCTAACAGATTATCTAAATGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TATATTTTTTATTTTTTTTATTATTATTATATATA
GTTTTTACGATACCTATGAGGAATTGAAAC	TTTCAATCATGTCTCTTTGAACGTTGCCACCTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	AGATTAAAGTTTGTAAAGGAAACGTATACAAACAAA
GTTTTTACGATACCTATGAGGAATTGAAAC	AAGGAAAGATATGGCATTGATGTACATACTATAAGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TTTTCAGATACATCAATACCATATAACATAATTTATA
GTTTTTACGATACCTATGAGGAATTGAAAC	CTAAAATGGGCATGGTTTTTGAGCCTTGTTTACCACC
GTTTTTACGATACCTATGAGGAATTGAAAC	TGGGATTGTTACAGAAGTAGAAGTAAGAGGGGATGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGTAATTGTTTAGTGCTTGTTCGTTTTCAATTAATTTTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	AAGAACCTGTCTTTTTCTGTTGGTTCTTGTTCTTTTTCT
GTTTTTACGATACCTATGAGGAATTGAAAC	ACACTTCTTTACCATCCACTAGGATGGCAAGTTGC
GTTTTTACGATACCTATGAGGAATTGAAAC	CATTTCCAGCGATACCAAGCCAATTGTTCAGGGGTAATAC
GTTTTTACGATACCTATGAGGAATTGAAAC

>NC_015499|1|1|807036-812677|CRISPRCasFinder
GTTTTTACGATACCTATGAGGAATTGAAAC	CAGGACGAATATAAAGAAGATAATCTCAGACATTGAGA
GTTTTTACGATACCTATGAGGAATTGAAAC	CGCTATTCGCTCAAGCTCACTAGTCGACATAAGCC
GTTTTTACGATACCTATGAGGAATTGAAAC	AAAAAAGAAATAAGTTTGTCTTCTTCTGAAATATC
GTTTTTACGATACCTATGAGGAATTGAAAC	CATTTCCATCTATACCAAGCCAGTTGTTCAGGAGTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	GCGTAAACTGTAATAAGTTTACACTCGTCGTCGT
GTTTTTACGATACCTATGAGGAATTGAAAC	TGGGATGGTCTGGGTCCAGCCCACACCAATCCCAG
GTTTTTACGATACCTATGAGGAATTGAAAC	GCAGTTGGGACATGCGATGATGCCCACAATAATTTTT
GTTTTTACGATACCTATGAGGAATTGAAAC	AATGACAATATAAATATTTTGTTTGATAGATTTGTCACAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGTAATCGTTAATGATATTTTCAATATCGATTTCTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	AAAGTTCTTTTTATTTCTCTTACAAAGTCGTTATCGT
GTTTTTACGATACCTATGAGGAATTGAAAC	AAATTTCTTTAAATTTTTTGATGTCTTCTGTTAC
GTTTTTACGATACCTATGAGGAATTGAAAC	GAAAGTATACGAAATACTTTCTGAATTGAAATTTCTC
GTTTTTACGATACCTATGAGGAATTGAAAC	AGCTTTTTCACAAAAATTTTCATCATTTTATCCAC
GTTTTTACGATACCTATGAGGAATTGAAAC	GTAGAAGAAGCTGCTTGTCTTGGTTTCAAAACAACCA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGAATAAAGTGCTTGACAGAAAAAAAGAAAATGTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TAATCTTGGAAGAACTGGTGGAGAAAGCACAGTTTCAG
GTTTTTACGATACCTATGAGGAATTGAAAC	AGAAAGATTTACTGGTATTTCTGTTTTTGAAACTTTTT
GTTTTTACGATACCTATGAGGAATTGAAAC	AGGAAAGTGTAAAAGACATATAAAACATCGTCCCTATA
GTTTTTACGATACCTATGAGGAATTGAAAC	CTAAGAAAGAACTCCCTCAACCCCCAAGATCACTACTA
GTTTTTACGATACCTATGAGGAATTGAAAC	CAATTTTGTTATTTGGTTGTGTTACAATTGTTTTTT
GTTTTTACGATACCTATGAGGAATTGAAAC	GAACTCTATAATATAGGCGACATGACAATATATGTTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	CTAAACAAGATATTAACGATATAGCAAATGCCTTAGTCCA
GTTTTTACGATACCTATGAGGAATTGAAAC	AGTTCCTTGTCAGGGCAGGAAGTGTCCTGAAAAGGAAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGGGTAAAACACTTGACAAGAAAAAAAGAAAAGAATA
GTTTTTACGATACCTATGAGGAATTGAAAC	GTCGATAAGAAAAATTTATAAATATGAACAAAAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TATACGTCTTCTGACCATGACTGGCATGTGCATATATATG
GTTTTTACGATACCTATGAGGAATTGAAAC	AAGGTAGCAACGTCTCCATTAACAAACCCTCATTGG
GTTTTTACGATACCTATGAGGAATTGAAAC	GGAGCGCAGTTGTGGTTTCGAACTCTTCTTCGTCCAG
GTTTTTACGATACCTATGAGGAATTGAAAC	ACGAGCGTGCAAGAAAGAAACCAAGATGGTGGTGCGGCTG
GTTTTTACGATACCTATGAGGAATTGAAAC	ATGAAACTTTTAAAAAAGGAGTGATATAAATGATGA
GTTTTTACGATACCTATGAGGAATTGAAAC	AAAGCAATGAAAGAATATAGAGAAATTTCACTTCAGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TCGGATACTTCAAGTTATATAAAAAATTTCTTTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	GTTTTTGAAAAAACTGTAAAAGAACTTCTGAAAGGTTA
GTTTTTACGATACCTATGAGGAATTGAAAC	TCTATTTTCTAATGCTGAAAAGGTATTTTCCCCTT
GTTTTTACGATACCTATGAGGAATTGAAAC	ACAGAAGAAATGAGATTAGCATTTAGAACTATTCAAA
GTTTTTACGATACCTATGAGGAATTGAAAC	ATCGTTCCCTTCACTATCAGATTTTGCAAATAGTTAT
GTTTTTACGATACCTATGAGGAATTGAAAC	AGTCAATCTGGGTCAACAGCACCAGTTTTTTCAAATGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TTTCAAATCCGTCACAATAGAAAGGGTCTGCTCCA
GTTTTTACGATACCTATGAGGAATTGAAAC	CAACATTTTTTTCTAACATTGCAATATTTATTTTA
GTTTTTACGATACCTATGAGGAATTGAAAC	CAGTTTTTTCAAAAATTAATTTCATTTTACTCCTTCC
GTTTTTACGATACCTATGAGGAATTGAAAC	ACGAAAGAAGAGTATCAGGACCTCCTCGTCCTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	ACACAGGCGCAAAATTCTTCAAATAGAGGCACTTCAA
GTTTTTACGATACCTATGAGGAATTGAAAC	GGACTAAATCCAGCACCCGGCCTTCTAGTAGATTTTG
GTTTTTACGATACCTATGAGGAATTGAAAC	AAAGTCAATATAGGTACTATAAGCATATAATATATT
GTTTTTACGATACCTATGAGGAATTGAAAC	GTTGATATGTCTATATAGACTTGAAGCATATAATATA
GTTTTTACGATACCTATGAGGAATTGAAAC	CCGGCGATGTTGATGACCCGCAAAAAGAGGGGTTCGA
GTTTTTACGATACCTATGAGGAATTGAAAC	AGAATACACGAGGGGGTTCTACCTTCCCTATTTTTTT
GTTTTTACGATACCTATGAGGAATTGAAAC	GGGATTTTGAGGGGGTGCTCTCATATGAGAGACTCC
GTTTTTACGATACCTATGAGGAATTGAAAC	AGTTTAATGCTGATAACCCATATACAAAAACGCTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	AGACTTCCTTGTCCTGCTTAGGCAGGCAGAAGAAGT
GTTTTTACGATACCTATGAGGAATTGAAAC	GACGATAAGAAAAACTTATAAATATAAACAAAAAAA
GTTTTTACGATACCTATGAGGAATTGAAAC	CGCAAGTGAACTCCCTGAAAAATATCTAAGGGGGTTCC
GTTTTTACGATACCTATGAGGAATTGAAAC	TGGGATGGTCTGGGTCCAGCCCACACCAATCCCAGTAAC
GTTTTTACGATACCTATGAGGAATTGAAAC	ATACTGTTATAAAGCGCTATTCACAATTACAAAGCGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TCATTTGCGCTCCGACGAAAGTCTTTTCATCGACGAAAACCCCC
GTTTTTACGATACCTATGAGGAATTGAAAC	AACAATGTTGTAGGATAAGGAATTGTTCCATCCAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGTTTTTTTTAAATACGAGCGTTTTTTAAGCAATTAG
GTTTTTACGATACCTATGAGGAATTGAAAC	GCACTTTTCAAAGAACTTTTAATTATCAATACCA
GTTTTTACGATACCTATGAGGAATTGAAAC	AAGATTTTCAGGGAGCTTTTTACGCAAGTGAACTCCC
GTTTTTACGATACCTATGAGGAATTGAAAC	ATAATAGATGGTTCGTGCATTTTCCCGTCCTCTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	CAAAGAGGGAGTACAGGCAAATCCTCGCCCTCTTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGTCTAAGCTAAGAGTAAAATCTAAACTAGCATTAG
GTTTTTACGATACCTATGAGGAATTGAAAC	CGTTTCCAATAGTATTTGTTCCTGCAGGTAGTGGTTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TTGCAGGCGATGCACAATCAGGCATTTATAAGTCAGG
GTTTTTACGATACCTATGAGGAATTGAAAC	CATATATACTACCATAAATATGAGTATATATAAACA
GTTTTTACGATACCTATGAGGAATTGAAAC	AGTAGAAAGCCATTTGATATAGGGGGGTCAATGTTTG
GTTTTTACGATACCTATGAGGAATTGAAAC	GCTTTACAAAAAGAAACAGACCAAACCAATTTAGC
GTTTTTACGATACCTATGAGGAATTGAAAC	AACTCTTCTTCATCCAGGAATTGGCCCTTTTTGAGCCAA
GTTTTTACGATACCTATGAGGAATTGAAAC	CTACAATGTTTTTTGCTGCTAATCAAATGCCTTATGCAT
GTTTTTACGATACCTATGAGGAATTGAAAC	ATAACAGCCCTAATACATTAGACATCTACAACGATAT
GTTTTTACGATACCTATGAGGAATTGAAAC	TATTGATATCCTAACTGAGCAAAAATATTTTTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TATTGCTTTTAGGGTTGTTTTTTTGTTTTTTGTTTTGT
GTTTTTACGATACCTATGAGGAATTGAAAC	TCGTTCAAGATATATAGCCTAACAGATTATCTAAATGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TATATTTTTTATTTTTTTTATTATTATTATATATA
GTTTTTACGATACCTATGAGGAATTGAAAC	TTTCAATCATGTCTCTTTGAACGTTGCCACCTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	AGATTAAAGTTTGTAAAGGAAACGTATACAAACAAA
GTTTTTACGATACCTATGAGGAATTGAAAC	AAGGAAAGATATGGCATTGATGTACATACTATAAGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TTTTCAGATACATCAATACCATATAACATAATTTATA
GTTTTTACGATACCTATGAGGAATTGAAAC	CTAAAATGGGCATGGTTTTTGAGCCTTGTTTACCACC
GTTTTTACGATACCTATGAGGAATTGAAAC	TGGGATTGTTACAGAAGTAGAAGTAAGAGGGGATGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGTAATTGTTTAGTGCTTGTTCGTTTTCAATTAATTTTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	AAGAACCTGTCTTTTTCTGTTGGTTCTTGTTCTTTTTCT
GTTTTTACGATACCTATGAGGAATTGAAAC	ACACTTCTTTACCATCCACTAGGATGGCAAGTTGC
GTTTTTACGATACCTATGAGGAATTGAAAC	CATTTCCAGCGATACCAAGCCAATTGTTCAGGGGTAATAC
GTTTTTACGATACCTATGAGGAATTGAAAC

>NC_015499|1|1|807036-812677|CRT
GTTTTTACGATACCTATGAGGAATTGAAAC	CAGGACGAATATAAAGAAGATAATCTCAGACATTGAGA
GTTTTTACGATACCTATGAGGAATTGAAAC	CGCTATTCGCTCAAGCTCACTAGTCGACATAAGCC
GTTTTTACGATACCTATGAGGAATTGAAAC	AAAAAAGAAATAAGTTTGTCTTCTTCTGAAATATC
GTTTTTACGATACCTATGAGGAATTGAAAC	CATTTCCATCTATACCAAGCCAGTTGTTCAGGAGTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	GCGTAAACTGTAATAAGTTTACACTCGTCGTCGT
GTTTTTACGATACCTATGAGGAATTGAAAC	TGGGATGGTCTGGGTCCAGCCCACACCAATCCCAG
GTTTTTACGATACCTATGAGGAATTGAAAC	GCAGTTGGGACATGCGATGATGCCCACAATAATTTTT
GTTTTTACGATACCTATGAGGAATTGAAAC	AATGACAATATAAATATTTTGTTTGATAGATTTGTCACAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGTAATCGTTAATGATATTTTCAATATCGATTTCTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	AAAGTTCTTTTTATTTCTCTTACAAAGTCGTTATCGT
GTTTTTACGATACCTATGAGGAATTGAAAC	AAATTTCTTTAAATTTTTTGATGTCTTCTGTTAC
GTTTTTACGATACCTATGAGGAATTGAAAC	GAAAGTATACGAAATACTTTCTGAATTGAAATTTCTC
GTTTTTACGATACCTATGAGGAATTGAAAC	AGCTTTTTCACAAAAATTTTCATCATTTTATCCAC
GTTTTTACGATACCTATGAGGAATTGAAAC	GTAGAAGAAGCTGCTTGTCTTGGTTTCAAAACAACCA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGAATAAAGTGCTTGACAGAAAAAAAGAAAATGTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TAATCTTGGAAGAACTGGTGGAGAAAGCACAGTTTCAG
GTTTTTACGATACCTATGAGGAATTGAAAC	AGAAAGATTTACTGGTATTTCTGTTTTTGAAACTTTTT
GTTTTTACGATACCTATGAGGAATTGAAAC	AGGAAAGTGTAAAAGACATATAAAACATCGTCCCTATA
GTTTTTACGATACCTATGAGGAATTGAAAC	CTAAGAAAGAACTCCCTCAACCCCCAAGATCACTACTA
GTTTTTACGATACCTATGAGGAATTGAAAC	CAATTTTGTTATTTGGTTGTGTTACAATTGTTTTTT
GTTTTTACGATACCTATGAGGAATTGAAAC	GAACTCTATAATATAGGCGACATGACAATATATGTTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	CTAAACAAGATATTAACGATATAGCAAATGCCTTAGTCCA
GTTTTTACGATACCTATGAGGAATTGAAAC	AGTTCCTTGTCAGGGCAGGAAGTGTCCTGAAAAGGAAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGGGTAAAACACTTGACAAGAAAAAAAGAAAAGAATA
GTTTTTACGATACCTATGAGGAATTGAAAC	GTCGATAAGAAAAATTTATAAATATGAACAAAAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TATACGTCTTCTGACCATGACTGGCATGTGCATATATATG
GTTTTTACGATACCTATGAGGAATTGAAAC	AAGGTAGCAACGTCTCCATTAACAAACCCTCATTGG
GTTTTTACGATACCTATGAGGAATTGAAAC	GGAGCGCAGTTGTGGTTTCGAACTCTTCTTCGTCCAG
GTTTTTACGATACCTATGAGGAATTGAAAC	ACGAGCGTGCAAGAAAGAAACCAAGATGGTGGTGCGGCTG
GTTTTTACGATACCTATGAGGAATTGAAAC	ATGAAACTTTTAAAAAAGGAGTGATATAAATGATGA
GTTTTTACGATACCTATGAGGAATTGAAAC	AAAGCAATGAAAGAATATAGAGAAATTTCACTTCAGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TCGGATACTTCAAGTTATATAAAAAATTTCTTTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	GTTTTTGAAAAAACTGTAAAAGAACTTCTGAAAGGTTA
GTTTTTACGATACCTATGAGGAATTGAAAC	TCTATTTTCTAATGCTGAAAAGGTATTTTCCCCTT
GTTTTTACGATACCTATGAGGAATTGAAAC	ACAGAAGAAATGAGATTAGCATTTAGAACTATTCAAA
GTTTTTACGATACCTATGAGGAATTGAAAC	ATCGTTCCCTTCACTATCAGATTTTGCAAATAGTTAT
GTTTTTACGATACCTATGAGGAATTGAAAC	AGTCAATCTGGGTCAACAGCACCAGTTTTTTCAAATGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TTTCAAATCCGTCACAATAGAAAGGGTCTGCTCCA
GTTTTTACGATACCTATGAGGAATTGAAAC	CAACATTTTTTTCTAACATTGCAATATTTATTTTA
GTTTTTACGATACCTATGAGGAATTGAAAC	CAGTTTTTTCAAAAATTAATTTCATTTTACTCCTTCC
GTTTTTACGATACCTATGAGGAATTGAAAC	ACGAAAGAAGAGTATCAGGACCTCCTCGTCCTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	ACACAGGCGCAAAATTCTTCAAATAGAGGCACTTCAA
GTTTTTACGATACCTATGAGGAATTGAAAC	GGACTAAATCCAGCACCCGGCCTTCTAGTAGATTTTG
GTTTTTACGATACCTATGAGGAATTGAAAC	AAAGTCAATATAGGTACTATAAGCATATAATATATT
GTTTTTACGATACCTATGAGGAATTGAAAC	GTTGATATGTCTATATAGACTTGAAGCATATAATATA
GTTTTTACGATACCTATGAGGAATTGAAAC	CCGGCGATGTTGATGACCCGCAAAAAGAGGGGTTCGA
GTTTTTACGATACCTATGAGGAATTGAAAC	AGAATACACGAGGGGGTTCTACCTTCCCTATTTTTTT
GTTTTTACGATACCTATGAGGAATTGAAAC	GGGATTTTGAGGGGGTGCTCTCATATGAGAGACTCC
GTTTTTACGATACCTATGAGGAATTGAAAC	AGTTTAATGCTGATAACCCATATACAAAAACGCTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	AGACTTCCTTGTCCTGCTTAGGCAGGCAGAAGAAGT
GTTTTTACGATACCTATGAGGAATTGAAAC	GACGATAAGAAAAACTTATAAATATAAACAAAAAAA
GTTTTTACGATACCTATGAGGAATTGAAAC	CGCAAGTGAACTCCCTGAAAAATATCTAAGGGGGTTCC
GTTTTTACGATACCTATGAGGAATTGAAAC	TGGGATGGTCTGGGTCCAGCCCACACCAATCCCAGTAAC
GTTTTTACGATACCTATGAGGAATTGAAAC	ATACTGTTATAAAGCGCTATTCACAATTACAAAGCGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TCATTTGCGCTCCGACGAAAGTCTTTTCATCGACGAAAACCCCC
GTTTTTACGATACCTATGAGGAATTGAAAC	AACAATGTTGTAGGATAAGGAATTGTTCCATCCAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGTTTTTTTTAAATACGAGCGTTTTTTAAGCAATTAG
GTTTTTACGATACCTATGAGGAATTGAAAC	GCACTTTTCAAAGAACTTTTAATTATCAATACCA
GTTTTTACGATACCTATGAGGAATTGAAAC	AAGATTTTCAGGGAGCTTTTTACGCAAGTGAACTCCC
GTTTTTACGATACCTATGAGGAATTGAAAC	ATAATAGATGGTTCGTGCATTTTCCCGTCCTCTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	CAAAGAGGGAGTACAGGCAAATCCTCGCCCTCTTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGTCTAAGCTAAGAGTAAAATCTAAACTAGCATTAG
GTTTTTACGATACCTATGAGGAATTGAAAC	CGTTTCCAATAGTATTTGTTCCTGCAGGTAGTGGTTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TTGCAGGCGATGCACAATCAGGCATTTATAAGTCAGG
GTTTTTACGATACCTATGAGGAATTGAAAC	CATATATACTACCATAAATATGAGTATATATAAACA
GTTTTTACGATACCTATGAGGAATTGAAAC	AGTAGAAAGCCATTTGATATAGGGGGGTCAATGTTTG
GTTTTTACGATACCTATGAGGAATTGAAAC	GCTTTACAAAAAGAAACAGACCAAACCAATTTAGC
GTTTTTACGATACCTATGAGGAATTGAAAC	AACTCTTCTTCATCCAGGAATTGGCCCTTTTTGAGCCAA
GTTTTTACGATACCTATGAGGAATTGAAAC	CTACAATGTTTTTTGCTGCTAATCAAATGCCTTATGCAT
GTTTTTACGATACCTATGAGGAATTGAAAC	ATAACAGCCCTAATACATTAGACATCTACAACGATAT
GTTTTTACGATACCTATGAGGAATTGAAAC	TATTGATATCCTAACTGAGCAAAAATATTTTTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	TATTGCTTTTAGGGTTGTTTTTTTGTTTTTTGTTTTGT
GTTTTTACGATACCTATGAGGAATTGAAAC	TCGTTCAAGATATATAGCCTAACAGATTATCTAAATGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TATATTTTTTATTTTTTTTATTATTATTATATATA
GTTTTTACGATACCTATGAGGAATTGAAAC	TTTCAATCATGTCTCTTTGAACGTTGCCACCTAA
GTTTTTACGATACCTATGAGGAATTGAAAC	AGATTAAAGTTTGTAAAGGAAACGTATACAAACAAA
GTTTTTACGATACCTATGAGGAATTGAAAC	AAGGAAAGATATGGCATTGATGTACATACTATAAGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TTTTCAGATACATCAATACCATATAACATAATTTATA
GTTTTTACGATACCTATGAGGAATTGAAAC	CTAAAATGGGCATGGTTTTTGAGCCTTGTTTACCACC
GTTTTTACGATACCTATGAGGAATTGAAAC	TGGGATTGTTACAGAAGTAGAAGTAAGAGGGGATGA
GTTTTTACGATACCTATGAGGAATTGAAAC	TGTAATTGTTTAGTGCTTGTTCGTTTTCAATTAATTTTGA
GTTTTTACGATACCTATGAGGAATTGAAAC	AAGAACCTGTCTTTTTCTGTTGGTTCTTGTTCTTTTTCT
GTTTTTACGATACCTATGAGGAATTGAAAC	ACACTTCTTTACCATCCACTAGGATGGCAAGTTGC
GTTTTTACGATACCTATGAGGAATTGAAAC	CATTTCCAGCGATACCAAGCCAATTGTTCAGGGGTAATAC
GTTTTTACGATACCTATGAGGAATTGAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_015499.1|WP_013756182.1|816628_818128_+|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl|CDD|224272
NC_015499.1|WP_041437933.1|812827_813223_+|DNA-binding-protein	unknown	unknown	gnl|CDD|153418
NC_015499.1|WP_013756184.1|820318_821722_+|hypothetical-protein	csm3gr7	cd09726_csm3gr7_CAS-III-D	gnl|CDD|187857
NC_015499.1|WP_013756175.1|802061_802778_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl|CDD|131641
NC_015499.1|WP_013756186.1|822289_824299_+|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|274902
NC_015499.1|WP_013756187.1|824344_825949_-|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl|CDD|129794
NC_015499.1|WP_013756185.1|821711_822272_+|TIGR03984-family-CRISPR-associated-protein	csx19	cls001376_csx19_CAS-III-D	gnl|CDD|274900
NC_015499.1|WP_013756181.1|815297_816632_+|DUF1887-family-protein	csx1	mkCas0112_csx1_CAS-III	gnl|CDD|312526
NC_015499.1|WP_013756173.1|799333_801076_+|TIGR02556-family-CRISPR-associated-protein	cas8b1	cd09730_cas8b1_CAS-I-B	gnl|CDD|378190
NC_015499.1|WP_041437932.1|805627_806623_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl|CDD|187853
NC_015499.1|WP_169309414.1|797433_798195_-|TSUP-family-transporter	unknown	unknown	gnl|CDD|376667
NC_015499.1|WP_013756176.1|802746_805098_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl|CDD|350688
NC_015499.1|WP_013756183.1|818124_820329_+|hypothetical-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|377130
NC_015499.1|WP_013756169.1|797115_797328_+|cold-shock-protein	unknown	unknown	gnl|CDD|224197
NC_015499.1|WP_041437934.1|813192_814308_+|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl|CDD|366234
NC_015499.1|WP_013756179.1|806622_806889_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NC_015499.1|WP_013756174.1|801138_802056_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	gnl|CDD|274217
NC_015499.1|WP_013756180.1|814294_815068_+|ATP-binding-protein	unknown	unknown	gnl|CDD|180607
NC_015499.1|WP_013756177.1|805097_805619_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl|CDD|366863
NC_015499.1|WP_013756172.1|798570_799329_+|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl|CDD|224499

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_015499.1|WP_013756182.1|816628_818128_+|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	6.4e-108	356.1	0.0
NC_015499.1|WP_013756184.1|820318_821722_+|hypothetical-protein	csm3gr7	cd09726_csm3gr7_CAS-III-D	3.8e-40	132.9	13.4
NC_015499.1|WP_013756175.1|802061_802778_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	2e-43	143.4	0.5
NC_015499.1|WP_013756185.1|821711_822272_+|TIGR03984-family-CRISPR-associated-protein	csx19	cls001376_csx19_CAS-III-D	6.9e-49	160.8	0.2
NC_015499.1|WP_013756181.1|815297_816632_+|DUF1887-family-protein	csx1	mkCas0112_csx1_CAS-III	9.5e-111	365.3	11.3
NC_015499.1|WP_013756173.1|799333_801076_+|TIGR02556-family-CRISPR-associated-protein	cas8b1	cd09730_cas8b1_CAS-I-B	1.8e-101	335.3	47.8
NC_015499.1|WP_041437932.1|805627_806623_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	9.3e-132	433.7	12.1
NC_015499.1|WP_013756186.1|822289_824299_+|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	1.6e-154	511.0	20.4
NC_015499.1|WP_013756176.1|802746_805098_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	5e-45	148.7	20.1
NC_015499.1|WP_013756183.1|818124_820329_+|hypothetical-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	1.8e-73	241.2	0.0
NC_015499.1|WP_013756179.1|806622_806889_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	2.1e-28	93.1	1.5
NC_015499.1|WP_013756174.1|801138_802056_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	2e-88	291.1	3.2
NC_015499.1|WP_013756177.1|805097_805619_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	2.4e-43	142.8	0.2
NC_015499.1|WP_013756172.1|798570_799329_+|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	8.7e-36	118.7	7.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_015499.1|WP_013756182.1|816628_818128_+|hypothetical-protein	gnl|CDD|224272	COG1353, COG1353, Predicted CRISPR-associated polymerase [Defense mechanisms].	7.14675e-06
NC_015499.1|WP_041437933.1|812827_813223_+|DNA-binding-protein	gnl|CDD|153418	cd07377, WHTH_GntR, Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators. This CD represents the winged HTH DNA-binding domain of the GntR (named after the gluconate operon repressor in Bacillus subtilis) family of bacterial transcriptional regulators and their putative homologs found in eukaryota and archaea. The GntR family has over 6000 members distributed among almost all bacterial species, which is comprised of FadR, HutC, MocR, YtrA, AraR, PlmA, and other subfamilies for the regulation of the most varied biological process. The monomeric proteins of the GntR family are characterized by two function domains: a small highly conserved winged helix-turn-helix prokaryotic DNA binding domain in the N-terminus, and a very diverse regulatory ligand-binding domain in the C-terminus for effector-binding/oligomerization, which provides the basis for the subfamily classifications. Binding of the effector to GntR-like transcriptional regulators is presumed to result in a conformational change that regulates the DNA-binding affinity of the repressor. The GntR-like proteins bind as dimers, where each monomer recognizes a half-site of 2-fold symmetric DNA sequences.	0.00252112
NC_015499.1|WP_013756184.1|820318_821722_+|hypothetical-protein	gnl|CDD|187857	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily proteins.	7.28986e-19
NC_015499.1|WP_013756175.1|802061_802778_+|type-I-B-CRISPR-associated-protein-Cas5	gnl|CDD|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	3.42672e-35
NC_015499.1|WP_013756186.1|822289_824299_+|TIGR03986-family-CRISPR-associated-RAMP-protein	gnl|CDD|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	7.89179e-135
NC_015499.1|WP_013756187.1|824344_825949_-|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl|CDD|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	7.953e-116
NC_015499.1|WP_013756185.1|821711_822272_+|TIGR03984-family-CRISPR-associated-protein	gnl|CDD|274900	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family. Members of this protein family are found exclusively in CRISPR-containing organisms, in operon contexts with RAMP (repeat-associated mystery protein) proteins also linked to CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats).	5.13246e-51
NC_015499.1|WP_013756181.1|815297_816632_+|DUF1887-family-protein	gnl|CDD|312526	pfam09002, DUF1887, Domain of unknown function (DUF1887). This domain is found in a set of hypothetical bacterial proteins.	0.00271579
NC_015499.1|WP_013756173.1|799333_801076_+|TIGR02556-family-CRISPR-associated-protein	gnl|CDD|378190	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This minor cas protein is found in at least five prokaryotic genomes: Methanosarcina mazei, Sulfurihydrogenibium azorense, Thermotoga maritima, Carboxydothermus hydrogenoformans, and Dictyoglomus thermophilum, the first of which is archaeal while the rest are bacterial.	4.0317e-136
NC_015499.1|WP_041437932.1|805627_806623_+|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl|CDD|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	4.53639e-154
NC_015499.1|WP_169309414.1|797433_798195_-|TSUP-family-transporter	gnl|CDD|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	4.397e-19
NC_015499.1|WP_013756176.1|802746_805098_+|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	9.64255e-49
NC_015499.1|WP_013756183.1|818124_820329_+|hypothetical-protein	gnl|CDD|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	3.11035e-13
NC_015499.1|WP_013756169.1|797115_797328_+|cold-shock-protein	gnl|CDD|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.31659e-31
NC_015499.1|WP_041437934.1|813192_814308_+|DDE-type-integrase/transposase/recombinase	gnl|CDD|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.11666e-11
NC_015499.1|WP_013756179.1|806622_806889_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	6.21525e-28
NC_015499.1|WP_013756174.1|801138_802056_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl|CDD|274217	TIGR02590, hypothetical_protein_MM_0563, CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csh2 protein of the Hmari subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02589, the Csd3 protein of the Dvulg CRISPR subtype.	1.03085e-88
NC_015499.1|WP_013756180.1|814294_815068_+|ATP-binding-protein	gnl|CDD|180607	PRK06526, PRK06526, transposase; Provisional.	1.96779e-72
NC_015499.1|WP_013756177.1|805097_805619_+|CRISPR-associated-protein-Cas4	gnl|CDD|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.26596e-50
NC_015499.1|WP_013756172.1|798570_799329_+|CRISPR-associated-endoribonuclease-Cas6	gnl|CDD|224499	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	6.64608e-26

Protein sequences

>NC_015499.1|WP_013756179.1|806622_806889_+|CRISPR-associated-endonuclease-Cas2
MFIILYYDVNEKRCSKMLKKCRAYLQWVQNSVFEGNLTESQLKRLISDLAKIINEEEGDSLIIYKFESQRYTDRIVVGKDKKTDINFI
>NC_015499.1|WP_041437932.1|805627_806623_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MKETVYIFNSGRIQRKDNTLFFESENGTKKFLPVENIKEIFVFGEVDFNKKTLEFLTTKQIIVHFFNFYDYYVGSFYPREHYNSGYMILKQALAYETTGRRLKIAKSFVEGAAKNSLKILKYYNRRGQNLISIIEEIESYVQEIECQESIETLMHVEGKIKQSYYGAFKNIINNSDFTFEKRTKKPPKDYLNALISFSNSLIYTYCLSEIYQTHLDPRIGFLHSTNFRRFSLNLDIAEIFKPVIGDRTIFAVLNKGIIDSRDFDNNLNGIILKPSGCRKFLEVLQERLNQTIKHSTLKREVSYRRLIRLECYKIEKFLMEDYEYKPFVMDW
>NC_015499.1|WP_013756177.1|805097_805619_+|CRISPR-associated-protein-Cas4
MSYLNYNQIHISPSVYNAFLICPRQAWLMSRQMVADQEFTYLDIGRLISEESFSRERKEIYIPDLSAKIDMITLKDGKYFVAEIKKSSATMPSGIEQLKYYMYLLRLKGVEIKGMIKIPLEKKSFEITLSPLDINNIEKRICEIKEVLNSENSPPVKRIKYCSKCAHYEFCFV
>NC_015499.1|WP_013756176.1|802746_805098_+|CRISPR-associated-helicase/endonuclease-Cas3
MKAVKTLSSSELFSHPGRLLEDHLISVADFIETFLDEKPKDLVEELKDLAIIVALTHDIGKATSYFQEYISSENNKIKLKNIETRHSLFSSICSFYLAKDILKDNILAIFAYIVVKRHHSNLIDILDELSIDEKELKVLNKQIDSIDDKKFSILCEKIKVRGLNRLLTKHVLYDWFNNFEKELSSLRPKIRRLNSDPRNYIKLNFLFSLLIDADKSDVVIGNLDSFTKRNNINPNAVDVFLKGRNFLPSPINDLRMKAYNEVVGKIESFNIQDKLYMINLPTGMGKTLISFSFALKLKKVLRENNIFSRIVYSLPFLSIIDQNSKVFEDVLQKNNVETSSNIILKHHHLSELYYKVDYTEFETNEAKILIEGWNSEIIITTFVQLFHTIFSNKNASLRKFHRFSNSIIILDEIQALPLKYWNVITNLFLSLTEELNIYLIISTATKPLIFNDQRVINLVDKKFYFNSLDRITIVPNITQKITLEKMKQKINFDLEKSILFIFNTISSAKKFYYLIKDVPNKTFLSSHILPEDRQNRINDIKRGKYQIVVSTQLVEAGVDVDFNLVVRDFAPIDSINQSSGRCNRNALNKGKVRIYYLKDDNTGKSYASYIYDPVLLDISEKILQEYKELKEANFLEVLDKYFSLIKEKKTQIESDKIFESMCKLKYDCGDNNDRCISVSNFHLIEEDYPREDIFIELNSEAEKIWLEYSELIKIEDRFLKKQKFEEIKSNFYKYVISVPSLHQNASNLPSIVNGFRYVCNAMLDTYYDRETGFILDSNNFMFV
>NC_015499.1|WP_013756175.1|802061_802778_+|type-I-B-CRISPR-associated-protein-Cas5
MKVLSFEIFGDYGHFRKFYTTSSPLTFAFPPFSTIAGMLGAICGVDKNDYLNVFGYDKCKIGLKIVNPIRKVRLGINYINTKDNLWRPIKKGRHEPRTQIRVEFLKNPRYRIFVYHENEKWMDKLSSFLKEHKCFFTLSLGLSELIANFMFKGYYSAERFSNLKDEIATPVGLSKVVNNEFIFEENKKYFKERIPIEMNQERIVKFFDDFIFEPNGKTIKCKVQEFYKLESGENIVFF
>NC_015499.1|WP_013756174.1|801138_802056_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MSELLKNRSEILFLYDVKDANPNGDPMDENKPRIDEETGINIVTDVRLKRTIRDYLADYKNCDIFIKRIEDENGKPKTKEERLEEYGTDPIVDRCIDIKLFGSTAAIKSKSVVKTGPVQFKFGRSLHKVDLTYIKGTTVMPSEKGKAQGTFTEKYILPYSLIAFYGIVNENIAKIQNIKLTDSDVDLMLEGMWNGTKNLISASKFGHMPRFLFQVIYKENEIFHIGELDKLIHLKSEINEEEIRDISDVKIDVTDLFVNLNKNKDKIEKIRFKTDDRVKVVFNNEESTIDKVFQGFPKENFSFLE
>NC_015499.1|WP_013756173.1|799333_801076_+|TIGR02556-family-CRISPR-associated-protein
MLAAIRELGKYVSKGTVEEKVDIEGKVLTIVFDNYDFSFKGIEIEDFDSLKIERYLYDNKKGNNSKAIKRIYKKSSQDEQYKEITKDLGIIKSFFNGVLKLEKAQNNISFIKGIIKIINQEEVLRSIAEKINDFNKKDLIYLTLKSSDGKYPGDYSFLKDANDNKSIEKYKKTASTGAKCSLCLEDKEVSGINDIFTFYTIDKPGFISGGFDKKDAWKNYPTCAECRDLLKKGKSFMMSELKFQFYDLNYFLIPKLVINDNKVLSEVIDIISQTKKKISLKKQVVRRLTDDEEEVLYNLSEQNDQISFNFLFLKINSNNNAERILLSLEDVFPSRLRAIFKAKEDVDEIFGRDFNFGRLRKFFKKSDDLKRNNDLDSFFLEIVNDIFMNKKIELSFLSKFFMLRISKEFIESRDNFSNFLNTVNDAMMDVLFLEKLKLIKSEEAKLVENSIFNDLFARYGPTLNTPVKRGIFLLGSLTQMLLNKQKDDRGSTPFIKKLKNLKMTQSDIKFLLPAVQNKFIEYDSFGFGKRKLAAEISKLLLSDDNWKMPVQEINFYFACGMNLYKEVGNILYEDKENEEV
>NC_015499.1|WP_013756172.1|798570_799329_+|CRISPR-associated-endoribonuclease-Cas6
MRIKLEFISDSEIKLRSGYNSLIQGLIYDLLDYVDAKKLHDEGFKFEKREFRLFSFSEILERGYVNKSEHVITFDNKISFLISSPVEWILKQIALNSIVGDDFKLGGNSLRINAVSVLKSFEEFIAKGSVVVKALTPIEVHSTFITANGARKTYFYTPFENEFSELINKNARKKWKAYFGCECSYELSIKPLFKDKKYETIRYFIKKDKKTIIKGWKGLYMLNAKPEFLRFILDAGLGSRNSQGFGLVEIVR
>NC_015499.1|WP_169309414.1|797433_798195_-|TSUP-family-transporter
MIVAIIGNIVGIGGGVMLLPFFIFYLHLNSIAASGLSLFTIVISTIGGTFAFIRQKTINYKLFTTIISLIIPGVIIGSIANKFVNTQEFKEILPLWVITIGIFSLVTAKKHPLKNMKDSENDSIKHSKLTKIVSFISGFVSGFFGVGIGGVMGTYLVAVEQISARIAFSTLVMVMTITSLFGFFVHFESAGLNLSSWIAYLIPLTLGAIFGSQIGAYISKTSNTKTLRLYQGYVILSLGISLLIVNFLNLIKI
>NC_015499.1|WP_013756169.1|797115_797328_+|cold-shock-protein
MNKGTVKWFNAEKGYGFISNANGGEDVFVHFSAIVSDGFKSLNEGQQVTFDIEKDPKNSKKLRAVNVKAL
>NC_015499.1|WP_041437933.1|812827_813223_+|DNA-binding-protein
MEDWVTIINLKKRNPSMGTRKIAKILGVSRNTVKRALKSETYPSYERGKMVYKELESFHEFIKEAFVFKRQRVSAIISNLRSKGYNGSNIAVYRYINEHFKELKGYFYKNITSHMKHLLVNKCNMIGLNIL
>NC_015499.1|WP_041437934.1|813192_814308_+|DDE-type-integrase/transposase/recombinase
MQYDWSEYTVSFGLEKIKVYLHSLIFGYSRKKFLDVSLNITQGTIFTILQESFKEAGGICRRIQVDNAKQFVSNPSRNNFKWNEAFLNFCGYYGIEATRSRPYYPESKGKVEKPFDFIEHHFIKNNNFDSFEDFYFKLKRFQEEFNNLYHSTIKGVPNQFFERERELLISLPEKELFLSSFLESRKVTSDCLISYNGNRYSVPHYFSGKDAWVTTYKGIKLYIYSQTKKLIAEHTIPKNKGNIVINKSHYKNYNNMVEESSFDSLSHRFLEHFSMFNDKDLFLDRIKNKKGLNPKYHLRHILSLFGYYDTLSCISVMQECIKYDIFNYHFVKGELQKYSLKEDSLSLTIKTTQIPSKNVKRSLQEYAYAKD
>NC_015499.1|WP_013756180.1|814294_815068_+|ATP-binding-protein
MQKTNNLTEAITYYCKILSLPLIKDIFIKEAEDAAKSKISYQQFLYNVLKIQADSRVDNSVKAKLKKAKFPFIKTIEEYDFSFQPEVDEKLIRELCNLNFMDDAKNIIFVGPPGVGKTHLAVGIGVRAALQRKRVLFFTAEELMTELIRANISAKIAEYVELLSRIDLIIIDELGYLEVNKSASSLFFKLVSKRYEKKSIILTTNKPFEEWGEIFGDDVVASAILDRLLHHSYPFLITGKSYRMKELFKKIERDKKD
>NC_015499.1|WP_013756181.1|815297_816632_+|DUF1887-family-protein
MGYKCLVLLIGTNPLPNYVVGSYLKDKYNKFIFIYSKEDEKINQSSTSEYAEKLKKHLYLNNNDCSLLPLSDISNPNSIKDDLKNKFPKGNIDEVHLNYTGGTKTMVAHVYNFLKEKFGDKFNASYLDARTYKLIYDNIEEDISLKDKVKIDINTLLSIHLYDKNVSFEIYDTYSYKSKFKNGFDEISQEIEKAVKDGKSEEFIKWLEDPFRKIFKGPDKILENKGKFKQHIDNLSKNNDLSPINKFNDNTPDFIWDILNAFPEDKRINDEQKLWIPDDSITNNKAFSERIKDTVEFLDGKWFEWYIYNEIRNELLNRGLKEEEHLGISLKAQKGNSPNFELDIFIINGYQLVGLSLTTSKRQRDCKLKGFEVIHRVRQIGGDESKAILITGLKKEYKDDSNRGTKKLQEDLSFVTGTAEDKIIVFGIDDWADIGDKICKEVFR
>NC_015499.1|WP_013756182.1|816628_818128_+|hypothetical-protein
MTLSALLIDTVSIQEYIFSSNKLKENIGASFLVKKIYKDVLKEALKITFGRDIDINEWKNNPSCIKIIQANDKVEIGYIGGGNALVLFKGKDKTTEFIKNYTKLLLVKVPGLKTAFGIIHEFDLKDFKNSMKNLHENLKENKNKYFPNVTLPKYGFTLDCPRTNESAEPFKDDDGKFVSSVALAKLKFSDKAKDILNDKYTLTNDIEELGQQEGRDYIAVVHIDGNKMGERFSKCESLIEYRNLSIGVGNATEKTFKKMIEILIDKIEKSKTFDSKDGEFKLSTENGKTILPIRPIVLGGDDITFISDGRLGVWLAEIFIKEFATQTINNESLSACGGVCITKTKYPFYRAYKLAEDLIDRAKKESRKKEGSYIDFFISSSGWSGSLDDIFNKHLSTVNGNLHFGPYRVDSTNDEKAIDNLKNIIKEFKNIPKNKVMKLREMLFEDKDNAKIYVEELKDSGIKLPEITNRSYHLDIWIDGKTPYFDAIELIDFYPEGLL
>NC_015499.1|WP_013756183.1|818124_820329_+|hypothetical-protein
MKVKIELLSYTLTGSGEGAGIIDSDVVLDGFGFPYIPSRRVKGVLKESAQEVCDILGVKYSIVESIFGEDGFTEGKLHIGNLYINNYKNIRKEIENLKNDKNKKYKTFINPSQIASYYTSIRQQTSIDEDREIAKEGSLRTFRVLKPDLEFEGELYEITPLSKKEKALLYLASINLKRIGTSRNRGFGEISCFIEDIKISSIDDAIKYLNSDNDKDIKEEIKSSDSEKFNANKKENIKKISYKITTLSPIVLAKEIGEQNTINTEKYIPSTTVRGLFASKFIKELNLSRTAHEDDGFHNIFLKGEIIFTPAYPLKNNKIYYPALYLHKEKGKDSNSVYNILEEVPENIKTKPVNKMVCYSADKIYYHDVPTTFYFHNARDREKGHSIGEEIFYYEAINEGEEFKGFIIGDEGYLEEIKRIFGDKFNSFIGRSKSAQYGLVNIEFGDLEDTDDLEDVEDEFIIVAISPIILYNEWGFSDISVKALENYLKKHFDCDIDVEKIIARTKYIENFIGVWRMKNTRELAYSAGSVFKIKIEGCNDLKEKLNHLSIYGFGEKTELGFGKVSVYFSLKKDYEIDYDDSDKNEEITPKFSKAILEDIVKKKAEEILKSKAFERAKDFHDKYRNKEIISNNLIGRLEGMLFETNKFDDWKTKKLKELDKKPAGETLKNLNLWDDLYKLDISDKYENRFYDNLSKAIQELDVQLDNFELSKTYWISFFRYLRLLNKQGEKKNER
>NC_015499.1|WP_013756184.1|820318_821722_+|hypothetical-protein
MSDNAKLINTIIIKGILENTSPFVIGTGKGDIIDIEIIKDEIGNPYIPATSFVGALRHHISKNFKEEDKKIWEYFWGSKNANNSEAVQSHIIVSDAKIKNGKDKSYIAVRDGVAIDEKRGIAKDKAKYDYEIVNKDLKFEFKAEIKIRKNFKDKEVEILKILKTILTELGAGKVQFGAFTTKGFGRFKLKNLQILKFDFPDDGVNYLKYLQHGDLQKDKLDLSKIDSLPLKDNNDCIITADFSIKSSLIISSYTTDPKDPDKVHIKYDDKNVLTGTSLKGAIRSRVFKIVNTLCKNNQEENNDLRKLFGWADTENKEKTKYKSRIIIDESIVEDVIEKEQTRIKIDRFTGGVMSGALFQSKPLWHNDENVQLKIKIKDTKDWEIGLLLLVLKDLWNEDLPIGGEKNIGRGVLKGKKIEIVYKGQKYIIEKSTNDDEADKIAINDTNKQVLEGFVKKFLERVRDWDVR
>NC_015499.1|WP_013756185.1|821711_822272_+|TIGR03984-family-CRISPR-associated-protein
MLDDIYKIEVTFSKVEAKDMDNEFIEKIEKIQNGYVVCWLDYAVLFGTVQNGEIKFYNNESPNFNRYLQKLRAFNEKKEIYIWRSGDKFRFRYREDEDSSGGDIKIEYIDAEQIMSGSEFKVKGEFIEVSEKRGIRYIISKEFIGNKSIEELNNKRLVLHTRNYIGYNEIGQAGFVDSRFLKISVI
>NC_015499.1|WP_013756186.1|822289_824299_+|TIGR03986-family-CRISPR-associated-RAMP-protein
MEKAKISLQKTKKGYDYVLTFENGKNLKAQGFNLPHNIDGKECEVERIKGVIEKIVINGKEYNKSNSSKNLDPQKNVKTENHQKNHETKQKIQYRPTAKAPYNFIPLNECVVKAQDIPEFNKYHKDRYSGYIDLLITTKTPVYIRRDKEESEFFSIKDGKPIIPGSSLRGMSRTLVEIVSFGKFVLFDKDKRLYYRDVAGKRSTLKDIYSSKINNDKIKAGYLIYDKGKYKIIPASYDRFKDTSKKFMIEIDNNDYKVWSGGMQGKRKNWIVKSISNSGDFIKLSENDLKDYKNDTNRNIPEYYDILKMAKDKEVTLSNNEKVELPNGVPVFYVEYEDKNRNKKLAFGHTGFFRLPYDLTIGAHVSENLKSDDIIDFTEAIFGKESKWASRVFFEDAVLDEGQSDIFMEETSPKILASPKPTAFQLYLEQPEEENTDLNKLKHWDDKDALIRGYKLYWHRNTPDDSTEKYSWSEGKAINDTQHTTVKPIKKNVKFKSRIRFENLTKEELGTLLFVLDLPENCCHKIGMGKPLGLGSIEIKPSLFIIDRKKRYSSLFNNDKWNLGDEDKTSEKNEFKVAFEKYILKNISHKDRNNKNSLWDTPRLKQLKAMLNWDNTDIQNWLEKTRYMMIECPKNEYDCICSDFKSDNKCNEYKNKKVLPYPNKICNLL
>NC_015499.1|WP_013756187.1|824344_825949_-|DHA2-family-efflux-MFS-transporter-permease-subunit
MGFSQLMITVAVMICIFMSSLDISIVNVAIPTIRGAIGVSISEATWISTSYMLANVIVMPAINFLTSMFGKTRCFFAGVLLFGIGSFMCGLSWNLESIIIFRALQGIGGGALIPLSQAILRENYPPHEQAKAMSFFGIGIVLGPGLGPTIGGWITDNISWNWIFYINIPFVIIDLILIYFFILNRSEKFSKDIKVDYIGLITMAIGLGALQVMLEKGQENNWFSSQFIVNLAITSVVFLTLFTIRELTCEKPAVNLKLLKNFGFSNPTVIQGIFGMGLFAGLFLIPILFQEALGYSATEAGIGMIPRSISMAMFMPIAGRLYNRTGAKKMIMFASALISLSFLPLSFMSLNTSAWDLFWPQFVQGIAFAFIFVSLSTVALMALERKDIVSGAGLYNLVRVLCGSIGTAVFATELENYQTINRFYLTEHVITNSPYSVQGFMTNPATLLSPYTTSPAITNFFAGINQLLLMQGASAADLPNKAYTMLSNFVDRQALIMAFNNVFFTLCLLFCVSFILSLFIVEKKSSWHREGGSE

Crispr_ID: NC_015499_2

• CRISPR_ID: NC_015499_2
• CRISPR_location: 815135-815230
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cas2,cas1,cas4,cas3,cas5,cas7,cas8b1,csx1,cas10,csm3gr7,csx19

Consensus repeat of NC_015499_2

Consensus_repeat	Method
AGTTTTTACGATACCTATGAGGAATTGAAACA	CRISPRCasFinder

spacers of NC_015499_2

>2.1|815167|32|NC_015499|CRISPRCasFinder
CAAATGGAAATTTGCAGGGTTCTGGCCAAGCA

CRISPR arrays and Neighbor proteins around NC_015499_2

CRISPR arrays

The CRISPR arrays of NC_015499_2

>merge|NC_015499|2|815135-815230|CRISPRCasFinder
AGTTTTTACGATACCTATGAGGAATTGAAACACAAATGGAAATTTGCAGGGTTCTGGCCAAGCAAGTTTTTACGATACCTATGAGGAATTGAAACA

>NC_015499|2|2|815135-815230|CRISPRCasFinder
AGTTTTTACGATACCTATGAGGAATTGAAACA	CAAATGGAAATTTGCAGGGTTCTGGCCAAGCA
AGTTTTTACGATACCTATGAGGAATTGAAACA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_015499.1|WP_013756182.1|816628_818128_+|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl|CDD|224272
NC_015499.1|WP_041437933.1|812827_813223_+|DNA-binding-protein	unknown	unknown	gnl|CDD|153418
NC_015499.1|WP_013756184.1|820318_821722_+|hypothetical-protein	csm3gr7	cd09726_csm3gr7_CAS-III-D	gnl|CDD|187857
NC_015499.1|WP_013756190.1|828866_829448_-|potassium-transporting-ATPase-subunit-KdpC	unknown	unknown	gnl|CDD|376890
NC_015499.1|WP_013756175.1|802061_802778_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl|CDD|131641
NC_015499.1|WP_013756187.1|824344_825949_-|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl|CDD|129794
NC_015499.1|WP_013756185.1|821711_822272_+|TIGR03984-family-CRISPR-associated-protein	csx19	cls001376_csx19_CAS-III-D	gnl|CDD|274900
NC_015499.1|WP_013756181.1|815297_816632_+|DUF1887-family-protein	csx1	mkCas0112_csx1_CAS-III	gnl|CDD|312526
NC_015499.1|WP_013756176.1|802746_805098_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl|CDD|350688
NC_015499.1|WP_041437932.1|805627_806623_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl|CDD|187853
NC_015499.1|WP_013756186.1|822289_824299_+|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|274902
NC_015499.1|WP_013756173.1|799333_801076_+|TIGR02556-family-CRISPR-associated-protein	cas8b1	cd09730_cas8b1_CAS-I-B	gnl|CDD|378190
NC_015499.1|WP_013756183.1|818124_820329_+|hypothetical-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|377130
NC_015499.1|WP_013756189.1|826942_828877_-|sensor-histidine-kinase-KdpD	unknown	unknown	gnl|CDD|225115
NC_015499.1|WP_013756188.1|826068_826923_+|metallophosphoesterase	unknown	unknown	gnl|CDD|365906
NC_015499.1|WP_013756180.1|814294_815068_+|ATP-binding-protein	unknown	unknown	gnl|CDD|180607
NC_015499.1|WP_013756179.1|806622_806889_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NC_015499.1|WP_013756174.1|801138_802056_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	gnl|CDD|274217
NC_015499.1|WP_013756177.1|805097_805619_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl|CDD|366863
NC_015499.1|WP_041437934.1|813192_814308_+|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl|CDD|366234

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_015499.1|WP_013756182.1|816628_818128_+|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	6.4e-108	356.1	0.0
NC_015499.1|WP_013756184.1|820318_821722_+|hypothetical-protein	csm3gr7	cd09726_csm3gr7_CAS-III-D	3.8e-40	132.9	13.4
NC_015499.1|WP_013756175.1|802061_802778_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	2e-43	143.4	0.5
NC_015499.1|WP_013756185.1|821711_822272_+|TIGR03984-family-CRISPR-associated-protein	csx19	cls001376_csx19_CAS-III-D	6.9e-49	160.8	0.2
NC_015499.1|WP_013756181.1|815297_816632_+|DUF1887-family-protein	csx1	mkCas0112_csx1_CAS-III	9.5e-111	365.3	11.3
NC_015499.1|WP_013756173.1|799333_801076_+|TIGR02556-family-CRISPR-associated-protein	cas8b1	cd09730_cas8b1_CAS-I-B	1.8e-101	335.3	47.8
NC_015499.1|WP_041437932.1|805627_806623_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	9.3e-132	433.7	12.1
NC_015499.1|WP_013756186.1|822289_824299_+|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	1.6e-154	511.0	20.4
NC_015499.1|WP_013756176.1|802746_805098_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	5e-45	148.7	20.1
NC_015499.1|WP_013756183.1|818124_820329_+|hypothetical-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	1.8e-73	241.2	0.0
NC_015499.1|WP_013756179.1|806622_806889_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	2.1e-28	93.1	1.5
NC_015499.1|WP_013756174.1|801138_802056_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	2e-88	291.1	3.2
NC_015499.1|WP_013756177.1|805097_805619_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	2.4e-43	142.8	0.2

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_015499.1|WP_013756182.1|816628_818128_+|hypothetical-protein	gnl|CDD|224272	COG1353, COG1353, Predicted CRISPR-associated polymerase [Defense mechanisms].	7.14675e-06
NC_015499.1|WP_041437933.1|812827_813223_+|DNA-binding-protein	gnl|CDD|153418	cd07377, WHTH_GntR, Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators. This CD represents the winged HTH DNA-binding domain of the GntR (named after the gluconate operon repressor in Bacillus subtilis) family of bacterial transcriptional regulators and their putative homologs found in eukaryota and archaea. The GntR family has over 6000 members distributed among almost all bacterial species, which is comprised of FadR, HutC, MocR, YtrA, AraR, PlmA, and other subfamilies for the regulation of the most varied biological process. The monomeric proteins of the GntR family are characterized by two function domains: a small highly conserved winged helix-turn-helix prokaryotic DNA binding domain in the N-terminus, and a very diverse regulatory ligand-binding domain in the C-terminus for effector-binding/oligomerization, which provides the basis for the subfamily classifications. Binding of the effector to GntR-like transcriptional regulators is presumed to result in a conformational change that regulates the DNA-binding affinity of the repressor. The GntR-like proteins bind as dimers, where each monomer recognizes a half-site of 2-fold symmetric DNA sequences.	0.00252112
NC_015499.1|WP_013756184.1|820318_821722_+|hypothetical-protein	gnl|CDD|187857	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily proteins.	7.28986e-19
NC_015499.1|WP_013756190.1|828866_829448_-|potassium-transporting-ATPase-subunit-KdpC	gnl|CDD|376890	pfam02669, KdpC, K+-transporting ATPase, c chain. This family consists of K+-transporting ATPase, c chain, KdpC. KdpC forms strong interactions with the KdpA subunit, serving to assemble and stabilize the Kdp complex. It has been suggested that KdpC could be one of the connecting links between the energy providing subunit KdpB and the K+-transporting subunit KdpA. The K+ transport system actively transports K+ ions via ATP hydrolysis.	4.64157e-92
NC_015499.1|WP_013756175.1|802061_802778_+|type-I-B-CRISPR-associated-protein-Cas5	gnl|CDD|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	3.42672e-35
NC_015499.1|WP_013756187.1|824344_825949_-|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl|CDD|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	7.953e-116
NC_015499.1|WP_013756185.1|821711_822272_+|TIGR03984-family-CRISPR-associated-protein	gnl|CDD|274900	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family. Members of this protein family are found exclusively in CRISPR-containing organisms, in operon contexts with RAMP (repeat-associated mystery protein) proteins also linked to CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats).	5.13246e-51
NC_015499.1|WP_013756181.1|815297_816632_+|DUF1887-family-protein	gnl|CDD|312526	pfam09002, DUF1887, Domain of unknown function (DUF1887). This domain is found in a set of hypothetical bacterial proteins.	0.00271579
NC_015499.1|WP_013756176.1|802746_805098_+|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	9.64255e-49
NC_015499.1|WP_041437932.1|805627_806623_+|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl|CDD|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	4.53639e-154
NC_015499.1|WP_013756186.1|822289_824299_+|TIGR03986-family-CRISPR-associated-RAMP-protein	gnl|CDD|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	7.89179e-135
NC_015499.1|WP_013756173.1|799333_801076_+|TIGR02556-family-CRISPR-associated-protein	gnl|CDD|378190	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This minor cas protein is found in at least five prokaryotic genomes: Methanosarcina mazei, Sulfurihydrogenibium azorense, Thermotoga maritima, Carboxydothermus hydrogenoformans, and Dictyoglomus thermophilum, the first of which is archaeal while the rest are bacterial.	4.0317e-136
NC_015499.1|WP_013756183.1|818124_820329_+|hypothetical-protein	gnl|CDD|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	3.11035e-13
NC_015499.1|WP_013756189.1|826942_828877_-|sensor-histidine-kinase-KdpD	gnl|CDD|225115	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms].	0
NC_015499.1|WP_013756188.1|826068_826923_+|metallophosphoesterase	gnl|CDD|365906	pfam00149, Metallophos, Calcineurin-like phosphoesterase. This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues.	7.0357e-11
NC_015499.1|WP_013756180.1|814294_815068_+|ATP-binding-protein	gnl|CDD|180607	PRK06526, PRK06526, transposase; Provisional.	1.96779e-72
NC_015499.1|WP_013756179.1|806622_806889_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	6.21525e-28
NC_015499.1|WP_013756174.1|801138_802056_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl|CDD|274217	TIGR02590, hypothetical_protein_MM_0563, CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csh2 protein of the Hmari subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02589, the Csd3 protein of the Dvulg CRISPR subtype.	1.03085e-88
NC_015499.1|WP_013756177.1|805097_805619_+|CRISPR-associated-protein-Cas4	gnl|CDD|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.26596e-50
NC_015499.1|WP_041437934.1|813192_814308_+|DDE-type-integrase/transposase/recombinase	gnl|CDD|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.11666e-11

Protein sequences

>NC_015499.1|WP_013756180.1|814294_815068_+|ATP-binding-protein
MQKTNNLTEAITYYCKILSLPLIKDIFIKEAEDAAKSKISYQQFLYNVLKIQADSRVDNSVKAKLKKAKFPFIKTIEEYDFSFQPEVDEKLIRELCNLNFMDDAKNIIFVGPPGVGKTHLAVGIGVRAALQRKRVLFFTAEELMTELIRANISAKIAEYVELLSRIDLIIIDELGYLEVNKSASSLFFKLVSKRYEKKSIILTTNKPFEEWGEIFGDDVVASAILDRLLHHSYPFLITGKSYRMKELFKKIERDKKD
>NC_015499.1|WP_041437934.1|813192_814308_+|DDE-type-integrase/transposase/recombinase
MQYDWSEYTVSFGLEKIKVYLHSLIFGYSRKKFLDVSLNITQGTIFTILQESFKEAGGICRRIQVDNAKQFVSNPSRNNFKWNEAFLNFCGYYGIEATRSRPYYPESKGKVEKPFDFIEHHFIKNNNFDSFEDFYFKLKRFQEEFNNLYHSTIKGVPNQFFERERELLISLPEKELFLSSFLESRKVTSDCLISYNGNRYSVPHYFSGKDAWVTTYKGIKLYIYSQTKKLIAEHTIPKNKGNIVINKSHYKNYNNMVEESSFDSLSHRFLEHFSMFNDKDLFLDRIKNKKGLNPKYHLRHILSLFGYYDTLSCISVMQECIKYDIFNYHFVKGELQKYSLKEDSLSLTIKTTQIPSKNVKRSLQEYAYAKD
>NC_015499.1|WP_041437933.1|812827_813223_+|DNA-binding-protein
MEDWVTIINLKKRNPSMGTRKIAKILGVSRNTVKRALKSETYPSYERGKMVYKELESFHEFIKEAFVFKRQRVSAIISNLRSKGYNGSNIAVYRYINEHFKELKGYFYKNITSHMKHLLVNKCNMIGLNIL
>NC_015499.1|WP_013756179.1|806622_806889_+|CRISPR-associated-endonuclease-Cas2
MFIILYYDVNEKRCSKMLKKCRAYLQWVQNSVFEGNLTESQLKRLISDLAKIINEEEGDSLIIYKFESQRYTDRIVVGKDKKTDINFI
>NC_015499.1|WP_041437932.1|805627_806623_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MKETVYIFNSGRIQRKDNTLFFESENGTKKFLPVENIKEIFVFGEVDFNKKTLEFLTTKQIIVHFFNFYDYYVGSFYPREHYNSGYMILKQALAYETTGRRLKIAKSFVEGAAKNSLKILKYYNRRGQNLISIIEEIESYVQEIECQESIETLMHVEGKIKQSYYGAFKNIINNSDFTFEKRTKKPPKDYLNALISFSNSLIYTYCLSEIYQTHLDPRIGFLHSTNFRRFSLNLDIAEIFKPVIGDRTIFAVLNKGIIDSRDFDNNLNGIILKPSGCRKFLEVLQERLNQTIKHSTLKREVSYRRLIRLECYKIEKFLMEDYEYKPFVMDW
>NC_015499.1|WP_013756177.1|805097_805619_+|CRISPR-associated-protein-Cas4
MSYLNYNQIHISPSVYNAFLICPRQAWLMSRQMVADQEFTYLDIGRLISEESFSRERKEIYIPDLSAKIDMITLKDGKYFVAEIKKSSATMPSGIEQLKYYMYLLRLKGVEIKGMIKIPLEKKSFEITLSPLDINNIEKRICEIKEVLNSENSPPVKRIKYCSKCAHYEFCFV
>NC_015499.1|WP_013756176.1|802746_805098_+|CRISPR-associated-helicase/endonuclease-Cas3
MKAVKTLSSSELFSHPGRLLEDHLISVADFIETFLDEKPKDLVEELKDLAIIVALTHDIGKATSYFQEYISSENNKIKLKNIETRHSLFSSICSFYLAKDILKDNILAIFAYIVVKRHHSNLIDILDELSIDEKELKVLNKQIDSIDDKKFSILCEKIKVRGLNRLLTKHVLYDWFNNFEKELSSLRPKIRRLNSDPRNYIKLNFLFSLLIDADKSDVVIGNLDSFTKRNNINPNAVDVFLKGRNFLPSPINDLRMKAYNEVVGKIESFNIQDKLYMINLPTGMGKTLISFSFALKLKKVLRENNIFSRIVYSLPFLSIIDQNSKVFEDVLQKNNVETSSNIILKHHHLSELYYKVDYTEFETNEAKILIEGWNSEIIITTFVQLFHTIFSNKNASLRKFHRFSNSIIILDEIQALPLKYWNVITNLFLSLTEELNIYLIISTATKPLIFNDQRVINLVDKKFYFNSLDRITIVPNITQKITLEKMKQKINFDLEKSILFIFNTISSAKKFYYLIKDVPNKTFLSSHILPEDRQNRINDIKRGKYQIVVSTQLVEAGVDVDFNLVVRDFAPIDSINQSSGRCNRNALNKGKVRIYYLKDDNTGKSYASYIYDPVLLDISEKILQEYKELKEANFLEVLDKYFSLIKEKKTQIESDKIFESMCKLKYDCGDNNDRCISVSNFHLIEEDYPREDIFIELNSEAEKIWLEYSELIKIEDRFLKKQKFEEIKSNFYKYVISVPSLHQNASNLPSIVNGFRYVCNAMLDTYYDRETGFILDSNNFMFV
>NC_015499.1|WP_013756175.1|802061_802778_+|type-I-B-CRISPR-associated-protein-Cas5
MKVLSFEIFGDYGHFRKFYTTSSPLTFAFPPFSTIAGMLGAICGVDKNDYLNVFGYDKCKIGLKIVNPIRKVRLGINYINTKDNLWRPIKKGRHEPRTQIRVEFLKNPRYRIFVYHENEKWMDKLSSFLKEHKCFFTLSLGLSELIANFMFKGYYSAERFSNLKDEIATPVGLSKVVNNEFIFEENKKYFKERIPIEMNQERIVKFFDDFIFEPNGKTIKCKVQEFYKLESGENIVFF
>NC_015499.1|WP_013756174.1|801138_802056_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MSELLKNRSEILFLYDVKDANPNGDPMDENKPRIDEETGINIVTDVRLKRTIRDYLADYKNCDIFIKRIEDENGKPKTKEERLEEYGTDPIVDRCIDIKLFGSTAAIKSKSVVKTGPVQFKFGRSLHKVDLTYIKGTTVMPSEKGKAQGTFTEKYILPYSLIAFYGIVNENIAKIQNIKLTDSDVDLMLEGMWNGTKNLISASKFGHMPRFLFQVIYKENEIFHIGELDKLIHLKSEINEEEIRDISDVKIDVTDLFVNLNKNKDKIEKIRFKTDDRVKVVFNNEESTIDKVFQGFPKENFSFLE
>NC_015499.1|WP_013756173.1|799333_801076_+|TIGR02556-family-CRISPR-associated-protein
MLAAIRELGKYVSKGTVEEKVDIEGKVLTIVFDNYDFSFKGIEIEDFDSLKIERYLYDNKKGNNSKAIKRIYKKSSQDEQYKEITKDLGIIKSFFNGVLKLEKAQNNISFIKGIIKIINQEEVLRSIAEKINDFNKKDLIYLTLKSSDGKYPGDYSFLKDANDNKSIEKYKKTASTGAKCSLCLEDKEVSGINDIFTFYTIDKPGFISGGFDKKDAWKNYPTCAECRDLLKKGKSFMMSELKFQFYDLNYFLIPKLVINDNKVLSEVIDIISQTKKKISLKKQVVRRLTDDEEEVLYNLSEQNDQISFNFLFLKINSNNNAERILLSLEDVFPSRLRAIFKAKEDVDEIFGRDFNFGRLRKFFKKSDDLKRNNDLDSFFLEIVNDIFMNKKIELSFLSKFFMLRISKEFIESRDNFSNFLNTVNDAMMDVLFLEKLKLIKSEEAKLVENSIFNDLFARYGPTLNTPVKRGIFLLGSLTQMLLNKQKDDRGSTPFIKKLKNLKMTQSDIKFLLPAVQNKFIEYDSFGFGKRKLAAEISKLLLSDDNWKMPVQEINFYFACGMNLYKEVGNILYEDKENEEV
>NC_015499.1|WP_013756181.1|815297_816632_+|DUF1887-family-protein
MGYKCLVLLIGTNPLPNYVVGSYLKDKYNKFIFIYSKEDEKINQSSTSEYAEKLKKHLYLNNNDCSLLPLSDISNPNSIKDDLKNKFPKGNIDEVHLNYTGGTKTMVAHVYNFLKEKFGDKFNASYLDARTYKLIYDNIEEDISLKDKVKIDINTLLSIHLYDKNVSFEIYDTYSYKSKFKNGFDEISQEIEKAVKDGKSEEFIKWLEDPFRKIFKGPDKILENKGKFKQHIDNLSKNNDLSPINKFNDNTPDFIWDILNAFPEDKRINDEQKLWIPDDSITNNKAFSERIKDTVEFLDGKWFEWYIYNEIRNELLNRGLKEEEHLGISLKAQKGNSPNFELDIFIINGYQLVGLSLTTSKRQRDCKLKGFEVIHRVRQIGGDESKAILITGLKKEYKDDSNRGTKKLQEDLSFVTGTAEDKIIVFGIDDWADIGDKICKEVFR
>NC_015499.1|WP_013756182.1|816628_818128_+|hypothetical-protein
MTLSALLIDTVSIQEYIFSSNKLKENIGASFLVKKIYKDVLKEALKITFGRDIDINEWKNNPSCIKIIQANDKVEIGYIGGGNALVLFKGKDKTTEFIKNYTKLLLVKVPGLKTAFGIIHEFDLKDFKNSMKNLHENLKENKNKYFPNVTLPKYGFTLDCPRTNESAEPFKDDDGKFVSSVALAKLKFSDKAKDILNDKYTLTNDIEELGQQEGRDYIAVVHIDGNKMGERFSKCESLIEYRNLSIGVGNATEKTFKKMIEILIDKIEKSKTFDSKDGEFKLSTENGKTILPIRPIVLGGDDITFISDGRLGVWLAEIFIKEFATQTINNESLSACGGVCITKTKYPFYRAYKLAEDLIDRAKKESRKKEGSYIDFFISSSGWSGSLDDIFNKHLSTVNGNLHFGPYRVDSTNDEKAIDNLKNIIKEFKNIPKNKVMKLREMLFEDKDNAKIYVEELKDSGIKLPEITNRSYHLDIWIDGKTPYFDAIELIDFYPEGLL
>NC_015499.1|WP_013756183.1|818124_820329_+|hypothetical-protein
MKVKIELLSYTLTGSGEGAGIIDSDVVLDGFGFPYIPSRRVKGVLKESAQEVCDILGVKYSIVESIFGEDGFTEGKLHIGNLYINNYKNIRKEIENLKNDKNKKYKTFINPSQIASYYTSIRQQTSIDEDREIAKEGSLRTFRVLKPDLEFEGELYEITPLSKKEKALLYLASINLKRIGTSRNRGFGEISCFIEDIKISSIDDAIKYLNSDNDKDIKEEIKSSDSEKFNANKKENIKKISYKITTLSPIVLAKEIGEQNTINTEKYIPSTTVRGLFASKFIKELNLSRTAHEDDGFHNIFLKGEIIFTPAYPLKNNKIYYPALYLHKEKGKDSNSVYNILEEVPENIKTKPVNKMVCYSADKIYYHDVPTTFYFHNARDREKGHSIGEEIFYYEAINEGEEFKGFIIGDEGYLEEIKRIFGDKFNSFIGRSKSAQYGLVNIEFGDLEDTDDLEDVEDEFIIVAISPIILYNEWGFSDISVKALENYLKKHFDCDIDVEKIIARTKYIENFIGVWRMKNTRELAYSAGSVFKIKIEGCNDLKEKLNHLSIYGFGEKTELGFGKVSVYFSLKKDYEIDYDDSDKNEEITPKFSKAILEDIVKKKAEEILKSKAFERAKDFHDKYRNKEIISNNLIGRLEGMLFETNKFDDWKTKKLKELDKKPAGETLKNLNLWDDLYKLDISDKYENRFYDNLSKAIQELDVQLDNFELSKTYWISFFRYLRLLNKQGEKKNER
>NC_015499.1|WP_013756184.1|820318_821722_+|hypothetical-protein
MSDNAKLINTIIIKGILENTSPFVIGTGKGDIIDIEIIKDEIGNPYIPATSFVGALRHHISKNFKEEDKKIWEYFWGSKNANNSEAVQSHIIVSDAKIKNGKDKSYIAVRDGVAIDEKRGIAKDKAKYDYEIVNKDLKFEFKAEIKIRKNFKDKEVEILKILKTILTELGAGKVQFGAFTTKGFGRFKLKNLQILKFDFPDDGVNYLKYLQHGDLQKDKLDLSKIDSLPLKDNNDCIITADFSIKSSLIISSYTTDPKDPDKVHIKYDDKNVLTGTSLKGAIRSRVFKIVNTLCKNNQEENNDLRKLFGWADTENKEKTKYKSRIIIDESIVEDVIEKEQTRIKIDRFTGGVMSGALFQSKPLWHNDENVQLKIKIKDTKDWEIGLLLLVLKDLWNEDLPIGGEKNIGRGVLKGKKIEIVYKGQKYIIEKSTNDDEADKIAINDTNKQVLEGFVKKFLERVRDWDVR
>NC_015499.1|WP_013756185.1|821711_822272_+|TIGR03984-family-CRISPR-associated-protein
MLDDIYKIEVTFSKVEAKDMDNEFIEKIEKIQNGYVVCWLDYAVLFGTVQNGEIKFYNNESPNFNRYLQKLRAFNEKKEIYIWRSGDKFRFRYREDEDSSGGDIKIEYIDAEQIMSGSEFKVKGEFIEVSEKRGIRYIISKEFIGNKSIEELNNKRLVLHTRNYIGYNEIGQAGFVDSRFLKISVI
>NC_015499.1|WP_013756186.1|822289_824299_+|TIGR03986-family-CRISPR-associated-RAMP-protein
MEKAKISLQKTKKGYDYVLTFENGKNLKAQGFNLPHNIDGKECEVERIKGVIEKIVINGKEYNKSNSSKNLDPQKNVKTENHQKNHETKQKIQYRPTAKAPYNFIPLNECVVKAQDIPEFNKYHKDRYSGYIDLLITTKTPVYIRRDKEESEFFSIKDGKPIIPGSSLRGMSRTLVEIVSFGKFVLFDKDKRLYYRDVAGKRSTLKDIYSSKINNDKIKAGYLIYDKGKYKIIPASYDRFKDTSKKFMIEIDNNDYKVWSGGMQGKRKNWIVKSISNSGDFIKLSENDLKDYKNDTNRNIPEYYDILKMAKDKEVTLSNNEKVELPNGVPVFYVEYEDKNRNKKLAFGHTGFFRLPYDLTIGAHVSENLKSDDIIDFTEAIFGKESKWASRVFFEDAVLDEGQSDIFMEETSPKILASPKPTAFQLYLEQPEEENTDLNKLKHWDDKDALIRGYKLYWHRNTPDDSTEKYSWSEGKAINDTQHTTVKPIKKNVKFKSRIRFENLTKEELGTLLFVLDLPENCCHKIGMGKPLGLGSIEIKPSLFIIDRKKRYSSLFNNDKWNLGDEDKTSEKNEFKVAFEKYILKNISHKDRNNKNSLWDTPRLKQLKAMLNWDNTDIQNWLEKTRYMMIECPKNEYDCICSDFKSDNKCNEYKNKKVLPYPNKICNLL
>NC_015499.1|WP_013756187.1|824344_825949_-|DHA2-family-efflux-MFS-transporter-permease-subunit
MGFSQLMITVAVMICIFMSSLDISIVNVAIPTIRGAIGVSISEATWISTSYMLANVIVMPAINFLTSMFGKTRCFFAGVLLFGIGSFMCGLSWNLESIIIFRALQGIGGGALIPLSQAILRENYPPHEQAKAMSFFGIGIVLGPGLGPTIGGWITDNISWNWIFYINIPFVIIDLILIYFFILNRSEKFSKDIKVDYIGLITMAIGLGALQVMLEKGQENNWFSSQFIVNLAITSVVFLTLFTIRELTCEKPAVNLKLLKNFGFSNPTVIQGIFGMGLFAGLFLIPILFQEALGYSATEAGIGMIPRSISMAMFMPIAGRLYNRTGAKKMIMFASALISLSFLPLSFMSLNTSAWDLFWPQFVQGIAFAFIFVSLSTVALMALERKDIVSGAGLYNLVRVLCGSIGTAVFATELENYQTINRFYLTEHVITNSPYSVQGFMTNPATLLSPYTTSPAITNFFAGINQLLLMQGASAADLPNKAYTMLSNFVDRQALIMAFNNVFFTLCLLFCVSFILSLFIVEKKSSWHREGGSE
>NC_015499.1|WP_013756188.1|826068_826923_+|metallophosphoesterase
MKRRDFIRLTFGLFTSVALFEFPNKLFAQEDNLYLRSLELLNNRDKFFGRDYFSFIVMGDSHKNDKVLKKAFELARSYDPMFVLFTGDMTNDGYEFEYKDFLNMCNILKDVPIFPIIGNHEIRNSTKALYERYMGPLNYTISIDKLDLKLVCIDNSEGIVRKDQHYFLDKELTDGCKIQFVAMHEPPSYEDWWIHSYYKGNKEVIDIVSKHQVNAVFQGHIHLYDHKVIKGVNYYISGGAGGRIYALNFGDPSYNILRVKVTKGVVSVEELQLRNFFDADKLLT
>NC_015499.1|WP_013756189.1|826942_828877_-|sensor-histidine-kinase-KdpD
MKDDDLKRPTPEEMLQVAKSEEKAKKGQLTIYLGYAPGVGKTYSMLSDAHLRKNEGIDIVVGYAETHNRPETEKLLEGLEVIPPLIVEYKGIKLKEVDFEKILKRRPQIAIIDELAHTNPPSFTNSKRYQDIEELLNAGIDVYTAVNVQHIESFKDIVLQVSKISIKETVPDSFFQQAFEIKLVDITPEELLKRLKEGKIYVENMAKSAIDQYFKVGNLLALRQIALRVVADSVDEKMRLYMIQHAIAGPWSIKKKVLVGVFASPYAKQLVRATYRFANEIDAQWIALHVETQKNKTFTKEEIDWLNGALDLVRTLGGQIVWLKGDDAAKEIIDYAKSHNVTKIVIGKPKKFSLFSRSIPEKLITGTKNIDIYMLDLKEEKINLKKKKIEFIYSNQYVIALFNIFVVSIFGYILREYLNNINMISLFFLALIFNALFLQFLPVLLSTFASLLIFDFLFIQPYYSFAISDLNYFLTFIVYSVAVLTINILASKLKTIIKTLKESQKREIGLYEFSTDLVMARNINQVLSLTINHIKKLFLFETAIFIREKEKIKLGAKTEKFEISPEIKGIASWCLINKKAAGLGTETFSNTNSLYLPMLTAKDSYGVIAIKITNKKNFKIDDRIALDAITRLSAMALERIYNLA
>NC_015499.1|WP_013756190.1|828866_829448_-|potassium-transporting-ATPase-subunit-KdpC
MKNLKSCIIIFIILTFITGIVYPLFITAIGQIFFPWQANGSLIYRNNAVVGSTLIGQFFNKRSDLFWSRPSGTPDHPYNATSSGGSNLGPTNPKLISKIENRINFLKENKMDLPVPSDLVMGSASGLDPDITPQAALAQIPRISKATNIPEETLKKLVINNVEPREFGILGAKRVNVLNLNLKLLELEKEYER

Crispr_ID: NC_015499_3

• CRISPR_ID: NC_015499_3
• CRISPR_location: 1769654-1776837
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 94 spacers
• Cas_protein_info: csa3,cas4,cas2,cas1,PrimPol,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10

Consensus repeat of NC_015499_3

Consensus_repeat	Method
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CRISPRCasFinder
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CRT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	PILER-CR

spacers of NC_015499_3

>3.1|1769690|38|NC_015499|CRISPRCasFinder,CRT
ATAGCGTTGTGCTAACTAACACAACGCTATTAGGATTG
>3.2|1769764|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
GAGGACAAAAATGACTAATCTTTGGTGTTCTATTCACACT
>3.3|1769840|43|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AGGACGAGGCTATATTTTAAAAGAGTTTCAAGGGTTCATTAAA
>3.4|1769919|43|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TTTCTAACATTAATATCAAAGATGAAATCAAAGAGTATGAAGA
>3.5|1769998|35|NC_015499|CRISPRCasFinder,CRT,PILER-CR
CTTGGCAGGTGTGAACCTGCCTGCGAATTATTTTA
>3.6|1770069|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
ATGGGGGAGGGATGTCGTCCAAGACAAGGACGGGTCAGTCCT
>3.7|1770147|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TTTAAATGAAAGAAAAAAAATTAAGAAAGCTTGTTGTTA
>3.8|1770222|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TGAAAAAATGAAAGAAGCTGTTTCACTTCTTTTATCGATGA
>3.9|1770299|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AAAAAATGAAAAAATTAAAAATTTCTGAAATAGAGTCCTTT
>3.10|1770376|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR
ATAAGATAGTAGGCTTTTCAGGTTTTTTGGCAGGCATAA
>3.11|1770451|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TTTTCTGGACCTGGAGGTGAAGTATGTTGAAGGTAAAGGGA
>3.12|1770528|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AAGAAGAACTTAGAGAGATATTGAAAGACTTACGCCGGTGT
>3.13|1770605|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TTCTCGCAACCTGCGATTTTTGTTTTCTCTTCACGAGGAGT
>3.14|1770682|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TAGAAGATAAAATTTAAAAAAAGGAGGACAAAAATGACTAAG
>3.15|1770760|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
CAAGGCAGGGGTAAACCTGCCAAGAAGCTATTTCAAGAAA
>3.16|1770836|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
CGCGCCCTTCTTGGGGTGTGCACTTCTTAGTTCAGGAAATTT
>3.17|1770914|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TACGGGCTTTATGTCCCACTTTTCTACGCTTACTCTGAAA
>3.18|1770990|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TTTGGGAGGTGGTATCCGTATTACGAGGACCCCTCGTATA
>3.19|1771066|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TACGGGCTTTATGTCCCACTTTTCTACGCTTACTCTGAAA
>3.20|1771142|36|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TATAAGAGTTTCTTTGGTTTTCTTCGTCTTCTCCTA
>3.21|1771214|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR
GCATGGGGGAGGAACGTCTTTATAGACGAGGACGGGTCC
>3.22|1771289|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AAACAAAAAAGTGAAATACTGGAAGAGGCTAAACGAAAATTG
>3.23|1771367|43|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TGGAGGGGCAGCCATACTGTTATGAGTCGGAGCCTTACGAATA
>3.24|1771446|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
ACAATGAAATTGAAACTAGAGAGAAAAGTAGATTCACAAAA
>3.25|1771523|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AGGACAAAAAGATGAAATTGACGAAAGTGGCTCCCACAGAAA
>3.26|1771601|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR
GCGAGTCTAGTACAGGTAAAAGTACGATTGTATTTACGG
>3.27|1771676|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TTGATGAAAAGGTTATTTTAGAACTTGATGCACTGTATA
>3.28|1771751|38|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TAGAATTAGACTCGCTATATAGCGAGTCTAGTACAGGT
>3.29|1771825|35|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TTTGGACTTGGAGGTGAAGTATGTTAAAGGTAAAG
>3.30|1771896|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AATATGATTTTCAAATACTATAATAAGGAGGACTAACTA
>3.31|1771971|32|NC_015499|CRISPRCasFinder,CRT,PILER-CR
ATGCATGGTAAAAATTTAATCTTATTTGATGA
>3.32|1772039|37|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AATCAAGGAAATAATTAGGGATTTGCGCAAGTGCAAA
>3.33|1772112|36|NC_015499|CRISPRCasFinder,CRT,PILER-CR
CTGCAGTCTTCGTTTTTCTCTTCACGAGGCATTTAT
>3.34|1772184|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TCATGTCACACTCCGACCAGCGAGCAGCTGGCGGAGTTAAAA
>3.35|1772262|38|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AAGGACGGATTTACGTCCTTTGTAACAGGTCAGCTCTT
>3.36|1772336|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TAAAAAAAGCTATTAAATTTGAAAATAAGCATCAAAATA
>3.37|1772411|43|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AATGAAGCCTACTATCTTATAGTAGGCTTCAGTGGCTTTCAGG
>3.38|1772490|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AAGGTAGGTTTAAAAAAATGAAAAAAGAGAGTAAAAAATTAA
>3.39|1772568|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TGGAACTGGACTACTCATAGGGTATATGCTCCAAACCCAA
>3.40|1772644|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TGTACTTTATTGGAGTAAATATGTATCAAAAGAAGTAAA
>3.41|1772719|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
CATATGATGAAAATAACGGTGTAGAGGTTGGGGTTGAGTGTA
>3.42|1772797|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TTAGACAGGCTACATATCTAATAAACTTAACATACAGTAAG
>3.43|1772874|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
CTCAAATCTTATAGACCCAACAAAGATACGTCCAGAAGCTA
>3.44|1772951|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AATGGATGGTTTTTCCATCCAGGGAATAAATGGGGTGCTC
>3.45|1773027|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TCAAGAGATTTACTAGGAATGGAATGGATGGTTTTTCCATC
>3.46|1773104|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
CTATGATTAGTCGAGAAGAGATTTATAGAATTTATCAAAAT
>3.47|1773181|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
CGATTGTATTTACGACTAATGGCAACAGGAACATCGCTAT
>3.48|1773257|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TAGTCAATTTGCTTGAAGAGTGCAAAAAAAGCACTTTTCAAG
>3.49|1773335|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
ACGAAACCTACTATAAAATAGTAGGTTTTTCAGGCTTCTTGG
>3.50|1773413|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AAATGATAATGAAAATCATTGTACTATTGCTGACAAAAAA
>3.51|1773489|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TGAAAAAAGGTTAAAAAAGATGATCATTAGCGTTGATGAAA
>3.52|1773566|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TATCCTCATTGCTATATGCATGGTAAAAATTTAATCTTAT
>3.53|1773642|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
GGAATATACAATATTGTGAAAGGAATGGTAGTTCCTGAGCAA
>3.54|1773720|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR
ATTTTTTAGTTCTTCTTGAACTTCTGAAGAAGTACAAGA
>3.55|1773795|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TAAGAAAAAAAGAAGATTTGAAACAATACAAATATGAAA
>3.56|1773870|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR
ATTTTTTAAGAGCTTTAATTATTTTATGGTTTTTTGCAA
>3.57|1773945|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TATTTATGCTTAATTCAGAAGATCCTGAATATTTTGAATA
>3.58|1774021|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
CTGTCCTGCAAGGGACAAGATCTACAAGTACCACTGGGAAA
>3.59|1774098|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
GGAAATGGAGTAGCAGTTAAAAAGTCCAAGAGGTCAAAAATT
>3.60|1774176|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
ATTTGAAGCAGGGAATATGATATTAGCAATGAATGGAACTG
>3.61|1774253|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
GTAGATTAATGTTATTTAACAAGATGGGAAAGGAATTGATA
>3.62|1774330|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
ACGTTGCCATCGACGTAGATGGTGACGTTTTTGGGTTTATAT
>3.63|1774408|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AAGGGCCAGCAAGGACATTCCCTTGCCGGCTCGCCCAAAG
>3.64|1774484|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AAGTAGAAGAACAATATGGGTTGTACGTACCCAGATTTGG
>3.65|1774560|38|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TTGTAAGATATGTGGAAGGGAAGTAGAAGAACAATATG
>3.66|1774634|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TTAGGGTTGTTGCAACACAATGTAGACGAGGCTTTCAAAAA
>3.67|1774711|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
ACAGCTTATTGGGGCGTCGGTAATTTTCCTAAGTGTTTTA
>3.68|1774787|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
CGACCGTGAGGCCGTCCTTTTTGAGAGTATGGATGGGTCT
>3.69|1774863|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR
CATTAGTTTTTGGAACTTTGCCGAGGAGAAAGTATTCCT
>3.70|1774938|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TTGAATACGTGAAGCACCATGGTGGTAGCTTCACAATAGGAA
>3.71|1775016|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AGTTCAAGCAGATGACATCGTCCTTCAGGACGATGGCTCAA
>3.72|1775093|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
CAAAACGGTGTATGCGGTTACGAATTAAAAGGATTTGAAA
>3.73|1775169|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
ATGAACTTCCATATCTATACATCTTGGACGAATGTTGTCCA
>3.74|1775246|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AAGATATTTGGTCACTTGTTGCCATACTTAAGGAGTGTAAAA
>3.75|1775324|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
ATATACACTCAATTTGGACGACCGTGAGGCCGTCCTTTTT
>3.76|1775400|36|NC_015499|CRISPRCasFinder,CRT,PILER-CR
GTAAAAAATGAGGGTAATTTTTGAAAAAATTGTAAG
>3.77|1775472|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TTGGAATTTTAATTCCGAGAAGGTCTTTCTCGGAAAGTGT
>3.78|1775548|45|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AAGGGAGCCTGTTATATACGGGCTCGACTACTTCAACAAATATAT
>3.79|1775629|38|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TGGTGTTGCGTACAATGTAGGTCTTGGAGAAATTCATA
>3.80|1775703|36|NC_015499|CRISPRCasFinder,CRT,PILER-CR
ACGTGCCATGTGTGTACGGTAACAAGTGGGTGTTTA
>3.81|1775775|37|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TAATCATATGAATCCAAGAGAAGATGTAATCAAAATT
>3.82|1775848|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TGTGATTGGCTCATTGGAGCTGGACAGATCCGTTTTATG
>3.83|1775923|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
CAATTTTAGAGTCTTCGAACTTGAAGACTCTGATTTGCAA
>3.84|1775999|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TTAAGACAGATAAGGAAGATTATTGATGAGAGAAAGAAAAAT
>3.85|1776077|42|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TTATTGATGAGAGAAAGAAAAATTGGCACGGGTTAGTAAAGA
>3.86|1776155|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AAATGTAAAATCAGCAGTTGAAAAAGTAGTCTCTGTACCA
>3.87|1776231|41|NC_015499|CRISPRCasFinder,CRT,PILER-CR
CAAATTATTACTACAACAAAACCACAAGAAACAATACAGAA
>3.88|1776308|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
CTGTAGAAGGCTTACAAGAAAAAATATTCTTGATATTCAA
>3.89|1776384|44|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TTGGTGGCGCAGCGAGCGTATTATTTGCAAAAGAAAAGTCAAAA
>3.90|1776464|36|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AATTTCTTCTTTAAAATAATCTTTCTCACTACTTCC
>3.91|1776536|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
ATGAAAAATTATTCAAAATACATTCAAGACTGAAAAATGT
>3.92|1776612|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
TATTGAAAGACAAAAATTTTATTTAATATCAAGGAAAATA
>3.93|1776688|40|NC_015499|CRISPRCasFinder,CRT,PILER-CR
ATATTGATTCTGAAGTTTTTGGATTAAAGGGGGTGTTAAA
>3.94|1776764|38|NC_015499|CRISPRCasFinder,CRT,PILER-CR
AGAAGGTAAATCTCTCAAACAGTTATTGAGAGAAATAC

CRISPR arrays and Neighbor proteins around NC_015499_3

CRISPR arrays

The CRISPR arrays of NC_015499_3

>merge|NC_015499|3|1769654-1776837|CRISPRCasFinder,CRT,PILER-CR
GTTTTTCTACCTTATTCTTCAAAGAATTCTTCTAATATAGCGTTGTGCTAACTAACACAACGCTATTAGGATTGGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACGAGGACAAAAATGACTAATCTTTGGTGTTCTATTCACACTGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAGGACGAGGCTATATTTTAAAAGAGTTTCAAGGGTTCATTAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTTTCTAACATTAATATCAAAGATGAAATCAAAGAGTATGAAGAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACCTTGGCAGGTGTGAACCTGCCTGCGAATTATTTTAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACATGGGGGAGGGATGTCGTCCAAGACAAGGACGGGTCAGTCCTGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTTTAAATGAAAGAAAAAAAATTAAGAAAGCTTGTTGTTAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTGAAAAAATGAAAGAAGCTGTTTCACTTCTTTTATCGATGAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAAAAAATGAAAAAATTAAAAATTTCTGAAATAGAGTCCTTTGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACATAAGATAGTAGGCTTTTCAGGTTTTTTGGCAGGCATAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTTTTCTGGACCTGGAGGTGAAGTATGTTGAAGGTAAAGGGAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAAGAAGAACTTAGAGAGATATTGAAAGACTTACGCCGGTGTGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTTCTCGCAACCTGCGATTTTTGTTTTCTCTTCACGAGGAGTGTCGCAATCCTTTATTCTTCAGGGAATTTTTCTAACTAGAAGATAAAATTTAAAAAAAGGAGGACAAAAATGACTAAGGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACCAAGGCAGGGGTAAACCTGCCAAGAAGCTATTTCAAGAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACCGCGCCCTTCTTGGGGTGTGCACTTCTTAGTTCAGGAAATTTGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTACGGGCTTTATGTCCCACTTTTCTACGCTTACTCTGAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTTTGGGAGGTGGTATCCGTATTACGAGGACCCCTCGTATAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTACGGGCTTTATGTCCCACTTTTCTACGCTTACTCTGAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTATAAGAGTTTCTTTGGTTTTCTTCGTCTTCTCCTAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACGCATGGGGGAGGAACGTCTTTATAGACGAGGACGGGTCCGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAAACAAAAAAGTGAAATACTGGAAGAGGCTAAACGAAAATTGGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTGGAGGGGCAGCCATACTGTTATGAGTCGGAGCCTTACGAATAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACACAATGAAATTGAAACTAGAGAGAAAAGTAGATTCACAAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAGGACAAAAAGATGAAATTGACGAAAGTGGCTCCCACAGAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACGCGAGTCTAGTACAGGTAAAAGTACGATTGTATTTACGGGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTTGATGAAAAGGTTATTTTAGAACTTGATGCACTGTATAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTAGAATTAGACTCGCTATATAGCGAGTCTAGTACAGGTGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTTTGGACTTGGAGGTGAAGTATGTTAAAGGTAAAGGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAATATGATTTTCAAATACTATAATAAGGAGGACTAACTAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACATGCATGGTAAAAATTTAATCTTATTTGATGAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAATCAAGGAAATAATTAGGGATTTGCGCAAGTGCAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACCTGCAGTCTTCGTTTTTCTCTTCACGAGGCATTTATGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTCATGTCACACTCCGACCAGCGAGCAGCTGGCGGAGTTAAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAAGGACGGATTTACGTCCTTTGTAACAGGTCAGCTCTTGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTAAAAAAAGCTATTAAATTTGAAAATAAGCATCAAAATAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAATGAAGCCTACTATCTTATAGTAGGCTTCAGTGGCTTTCAGGGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAAGGTAGGTTTAAAAAAATGAAAAAAGAGAGTAAAAAATTAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTGGAACTGGACTACTCATAGGGTATATGCTCCAAACCCAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTGTACTTTATTGGAGTAAATATGTATCAAAAGAAGTAAAGTCGCAATCCTTTATTCTTCAGGGAATTTTTCTAACCATATGATGAAAATAACGGTGTAGAGGTTGGGGTTGAGTGTAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTTAGACAGGCTACATATCTAATAAACTTAACATACAGTAAGGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACCTCAAATCTTATAGACCCAACAAAGATACGTCCAGAAGCTAGTCGCAATCCTTTATTCTTCAGGGAATTTTTCTAACAATGGATGGTTTTTCCATCCAGGGAATAAATGGGGTGCTCGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTCAAGAGATTTACTAGGAATGGAATGGATGGTTTTTCCATCGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACCTATGATTAGTCGAGAAGAGATTTATAGAATTTATCAAAATGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACCGATTGTATTTACGACTAATGGCAACAGGAACATCGCTATGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTAGTCAATTTGCTTGAAGAGTGCAAAAAAAGCACTTTTCAAGGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACACGAAACCTACTATAAAATAGTAGGTTTTTCAGGCTTCTTGGGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAAATGATAATGAAAATCATTGTACTATTGCTGACAAAAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTGAAAAAAGGTTAAAAAAGATGATCATTAGCGTTGATGAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTATCCTCATTGCTATATGCATGGTAAAAATTTAATCTTATGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACGGAATATACAATATTGTGAAAGGAATGGTAGTTCCTGAGCAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACATTTTTTAGTTCTTCTTGAACTTCTGAAGAAGTACAAGAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTAAGAAAAAAAGAAGATTTGAAACAATACAAATATGAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACATTTTTTAAGAGCTTTAATTATTTTATGGTTTTTTGCAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTATTTATGCTTAATTCAGAAGATCCTGAATATTTTGAATAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACCTGTCCTGCAAGGGACAAGATCTACAAGTACCACTGGGAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACGGAAATGGAGTAGCAGTTAAAAAGTCCAAGAGGTCAAAAATTGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACATTTGAAGCAGGGAATATGATATTAGCAATGAATGGAACTGGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACGTAGATTAATGTTATTTAACAAGATGGGAAAGGAATTGATAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACACGTTGCCATCGACGTAGATGGTGACGTTTTTGGGTTTATATGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAAGGGCCAGCAAGGACATTCCCTTGCCGGCTCGCCCAAAGGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAAGTAGAAGAACAATATGGGTTGTACGTACCCAGATTTGGGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTTGTAAGATATGTGGAAGGGAAGTAGAAGAACAATATGGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTTAGGGTTGTTGCAACACAATGTAGACGAGGCTTTCAAAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACACAGCTTATTGGGGCGTCGGTAATTTTCCTAAGTGTTTTAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACCGACCGTGAGGCCGTCCTTTTTGAGAGTATGGATGGGTCTGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACCATTAGTTTTTGGAACTTTGCCGAGGAGAAAGTATTCCTGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTTGAATACGTGAAGCACCATGGTGGTAGCTTCACAATAGGAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAGTTCAAGCAGATGACATCGTCCTTCAGGACGATGGCTCAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACCAAAACGGTGTATGCGGTTACGAATTAAAAGGATTTGAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACATGAACTTCCATATCTATACATCTTGGACGAATGTTGTCCAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAAGATATTTGGTCACTTGTTGCCATACTTAAGGAGTGTAAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACATATACACTCAATTTGGACGACCGTGAGGCCGTCCTTTTTGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACGTAAAAAATGAGGGTAATTTTTGAAAAAATTGTAAGGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTTGGAATTTTAATTCCGAGAAGGTCTTTCTCGGAAAGTGTGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAAGGGAGCCTGTTATATACGGGCTCGACTACTTCAACAAATATATGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTGGTGTTGCGTACAATGTAGGTCTTGGAGAAATTCATAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACACGTGCCATGTGTGTACGGTAACAAGTGGGTGTTTAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTAATCATATGAATCCAAGAGAAGATGTAATCAAAATTGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTGTGATTGGCTCATTGGAGCTGGACAGATCCGTTTTATGGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACCAATTTTAGAGTCTTCGAACTTGAAGACTCTGATTTGCAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTTAAGACAGATAAGGAAGATTATTGATGAGAGAAAGAAAAATGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTTATTGATGAGAGAAAGAAAAATTGGCACGGGTTAGTAAAGAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAAATGTAAAATCAGCAGTTGAAAAAGTAGTCTCTGTACCAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACCAAATTATTACTACAACAAAACCACAAGAAACAATACAGAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACCTGTAGAAGGCTTACAAGAAAAAATATTCTTGATATTCAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTTGGTGGCGCAGCGAGCGTATTATTTGCAAAAGAAAAGTCAAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAATTTCTTCTTTAAAATAATCTTTCTCACTACTTCCGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACATGAAAAATTATTCAAAATACATTCAAGACTGAAAAATGTGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACTATTGAAAGACAAAAATTTTATTTAATATCAAGGAAAATAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACATATTGATTCTGAAGTTTTTGGATTAAAGGGGGTGTTAAAGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAACAGAAGGTAAATCTCTCAAACAGTTATTGAGAGAAATACGTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC

>NC_015499|3|3|1769654-1776837|CRISPRCasFinder
GTTTTTCTACCTTATTCTTCAAAGAATTCTTCTAAT	ATAGCGTTGTGCTAACTAACACAACGCTATTAGGATTG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GAGGACAAAAATGACTAATCTTTGGTGTTCTATTCACACT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AGGACGAGGCTATATTTTAAAAGAGTTTCAAGGGTTCATTAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTTCTAACATTAATATCAAAGATGAAATCAAAGAGTATGAAGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTTGGCAGGTGTGAACCTGCCTGCGAATTATTTTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATGGGGGAGGGATGTCGTCCAAGACAAGGACGGGTCAGTCCT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTTAAATGAAAGAAAAAAAATTAAGAAAGCTTGTTGTTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGAAAAAATGAAAGAAGCTGTTTCACTTCTTTTATCGATGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAAAAATGAAAAAATTAAAAATTTCTGAAATAGAGTCCTTT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATAAGATAGTAGGCTTTTCAGGTTTTTTGGCAGGCATAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTTTCTGGACCTGGAGGTGAAGTATGTTGAAGGTAAAGGGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGAAGAACTTAGAGAGATATTGAAAGACTTACGCCGGTGT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTCTCGCAACCTGCGATTTTTGTTTTCTCTTCACGAGGAGT
GTCGCAATCCTTTATTCTTCAGGGAATTTTTCTAAC	TAGAAGATAAAATTTAAAAAAAGGAGGACAAAAATGACTAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CAAGGCAGGGGTAAACCTGCCAAGAAGCTATTTCAAGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CGCGCCCTTCTTGGGGTGTGCACTTCTTAGTTCAGGAAATTT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TACGGGCTTTATGTCCCACTTTTCTACGCTTACTCTGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTTGGGAGGTGGTATCCGTATTACGAGGACCCCTCGTATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TACGGGCTTTATGTCCCACTTTTCTACGCTTACTCTGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TATAAGAGTTTCTTTGGTTTTCTTCGTCTTCTCCTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GCATGGGGGAGGAACGTCTTTATAGACGAGGACGGGTCC
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAACAAAAAAGTGAAATACTGGAAGAGGCTAAACGAAAATTG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGGAGGGGCAGCCATACTGTTATGAGTCGGAGCCTTACGAATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ACAATGAAATTGAAACTAGAGAGAAAAGTAGATTCACAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AGGACAAAAAGATGAAATTGACGAAAGTGGCTCCCACAGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GCGAGTCTAGTACAGGTAAAAGTACGATTGTATTTACGG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTGATGAAAAGGTTATTTTAGAACTTGATGCACTGTATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TAGAATTAGACTCGCTATATAGCGAGTCTAGTACAGGT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTTGGACTTGGAGGTGAAGTATGTTAAAGGTAAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AATATGATTTTCAAATACTATAATAAGGAGGACTAACTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATGCATGGTAAAAATTTAATCTTATTTGATGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AATCAAGGAAATAATTAGGGATTTGCGCAAGTGCAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTGCAGTCTTCGTTTTTCTCTTCACGAGGCATTTAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TCATGTCACACTCCGACCAGCGAGCAGCTGGCGGAGTTAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGGACGGATTTACGTCCTTTGTAACAGGTCAGCTCTT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TAAAAAAAGCTATTAAATTTGAAAATAAGCATCAAAATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AATGAAGCCTACTATCTTATAGTAGGCTTCAGTGGCTTTCAGG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGGTAGGTTTAAAAAAATGAAAAAAGAGAGTAAAAAATTAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGGAACTGGACTACTCATAGGGTATATGCTCCAAACCCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGTACTTTATTGGAGTAAATATGTATCAAAAGAAGTAAA
GTCGCAATCCTTTATTCTTCAGGGAATTTTTCTAAC	CATATGATGAAAATAACGGTGTAGAGGTTGGGGTTGAGTGTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTAGACAGGCTACATATCTAATAAACTTAACATACAGTAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTCAAATCTTATAGACCCAACAAAGATACGTCCAGAAGCTA
GTCGCAATCCTTTATTCTTCAGGGAATTTTTCTAAC	AATGGATGGTTTTTCCATCCAGGGAATAAATGGGGTGCTC
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TCAAGAGATTTACTAGGAATGGAATGGATGGTTTTTCCATC
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTATGATTAGTCGAGAAGAGATTTATAGAATTTATCAAAAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CGATTGTATTTACGACTAATGGCAACAGGAACATCGCTAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TAGTCAATTTGCTTGAAGAGTGCAAAAAAAGCACTTTTCAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ACGAAACCTACTATAAAATAGTAGGTTTTTCAGGCTTCTTGG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAATGATAATGAAAATCATTGTACTATTGCTGACAAAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGAAAAAAGGTTAAAAAAGATGATCATTAGCGTTGATGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TATCCTCATTGCTATATGCATGGTAAAAATTTAATCTTAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GGAATATACAATATTGTGAAAGGAATGGTAGTTCCTGAGCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATTTTTTAGTTCTTCTTGAACTTCTGAAGAAGTACAAGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TAAGAAAAAAAGAAGATTTGAAACAATACAAATATGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATTTTTTAAGAGCTTTAATTATTTTATGGTTTTTTGCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TATTTATGCTTAATTCAGAAGATCCTGAATATTTTGAATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTGTCCTGCAAGGGACAAGATCTACAAGTACCACTGGGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GGAAATGGAGTAGCAGTTAAAAAGTCCAAGAGGTCAAAAATT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATTTGAAGCAGGGAATATGATATTAGCAATGAATGGAACTG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GTAGATTAATGTTATTTAACAAGATGGGAAAGGAATTGATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ACGTTGCCATCGACGTAGATGGTGACGTTTTTGGGTTTATAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGGGCCAGCAAGGACATTCCCTTGCCGGCTCGCCCAAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGTAGAAGAACAATATGGGTTGTACGTACCCAGATTTGG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTGTAAGATATGTGGAAGGGAAGTAGAAGAACAATATG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTAGGGTTGTTGCAACACAATGTAGACGAGGCTTTCAAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ACAGCTTATTGGGGCGTCGGTAATTTTCCTAAGTGTTTTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CGACCGTGAGGCCGTCCTTTTTGAGAGTATGGATGGGTCT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CATTAGTTTTTGGAACTTTGCCGAGGAGAAAGTATTCCT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTGAATACGTGAAGCACCATGGTGGTAGCTTCACAATAGGAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AGTTCAAGCAGATGACATCGTCCTTCAGGACGATGGCTCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CAAAACGGTGTATGCGGTTACGAATTAAAAGGATTTGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATGAACTTCCATATCTATACATCTTGGACGAATGTTGTCCA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGATATTTGGTCACTTGTTGCCATACTTAAGGAGTGTAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATATACACTCAATTTGGACGACCGTGAGGCCGTCCTTTTT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GTAAAAAATGAGGGTAATTTTTGAAAAAATTGTAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTGGAATTTTAATTCCGAGAAGGTCTTTCTCGGAAAGTGT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGGGAGCCTGTTATATACGGGCTCGACTACTTCAACAAATATAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGGTGTTGCGTACAATGTAGGTCTTGGAGAAATTCATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ACGTGCCATGTGTGTACGGTAACAAGTGGGTGTTTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TAATCATATGAATCCAAGAGAAGATGTAATCAAAATT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGTGATTGGCTCATTGGAGCTGGACAGATCCGTTTTATG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CAATTTTAGAGTCTTCGAACTTGAAGACTCTGATTTGCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTAAGACAGATAAGGAAGATTATTGATGAGAGAAAGAAAAAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTATTGATGAGAGAAAGAAAAATTGGCACGGGTTAGTAAAGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAATGTAAAATCAGCAGTTGAAAAAGTAGTCTCTGTACCA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CAAATTATTACTACAACAAAACCACAAGAAACAATACAGAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTGTAGAAGGCTTACAAGAAAAAATATTCTTGATATTCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTGGTGGCGCAGCGAGCGTATTATTTGCAAAAGAAAAGTCAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AATTTCTTCTTTAAAATAATCTTTCTCACTACTTCC
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATGAAAAATTATTCAAAATACATTCAAGACTGAAAAATGT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TATTGAAAGACAAAAATTTTATTTAATATCAAGGAAAATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATATTGATTCTGAAGTTTTTGGATTAAAGGGGGTGTTAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AGAAGGTAAATCTCTCAAACAGTTATTGAGAGAAATAC
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC

>NC_015499|3|2|1769654-1776837|CRT
GTTTTTCTACCTTATTCTTCAAAGAATTCTTCTAAT	ATAGCGTTGTGCTAACTAACACAACGCTATTAGGATTG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GAGGACAAAAATGACTAATCTTTGGTGTTCTATTCACACT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AGGACGAGGCTATATTTTAAAAGAGTTTCAAGGGTTCATTAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTTCTAACATTAATATCAAAGATGAAATCAAAGAGTATGAAGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTTGGCAGGTGTGAACCTGCCTGCGAATTATTTTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATGGGGGAGGGATGTCGTCCAAGACAAGGACGGGTCAGTCCT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTTAAATGAAAGAAAAAAAATTAAGAAAGCTTGTTGTTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGAAAAAATGAAAGAAGCTGTTTCACTTCTTTTATCGATGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAAAAATGAAAAAATTAAAAATTTCTGAAATAGAGTCCTTT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATAAGATAGTAGGCTTTTCAGGTTTTTTGGCAGGCATAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTTTCTGGACCTGGAGGTGAAGTATGTTGAAGGTAAAGGGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGAAGAACTTAGAGAGATATTGAAAGACTTACGCCGGTGT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTCTCGCAACCTGCGATTTTTGTTTTCTCTTCACGAGGAGT
GTCGCAATCCTTTATTCTTCAGGGAATTTTTCTAAC	TAGAAGATAAAATTTAAAAAAAGGAGGACAAAAATGACTAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CAAGGCAGGGGTAAACCTGCCAAGAAGCTATTTCAAGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CGCGCCCTTCTTGGGGTGTGCACTTCTTAGTTCAGGAAATTT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TACGGGCTTTATGTCCCACTTTTCTACGCTTACTCTGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTTGGGAGGTGGTATCCGTATTACGAGGACCCCTCGTATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TACGGGCTTTATGTCCCACTTTTCTACGCTTACTCTGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TATAAGAGTTTCTTTGGTTTTCTTCGTCTTCTCCTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GCATGGGGGAGGAACGTCTTTATAGACGAGGACGGGTCC
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAACAAAAAAGTGAAATACTGGAAGAGGCTAAACGAAAATTG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGGAGGGGCAGCCATACTGTTATGAGTCGGAGCCTTACGAATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ACAATGAAATTGAAACTAGAGAGAAAAGTAGATTCACAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AGGACAAAAAGATGAAATTGACGAAAGTGGCTCCCACAGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GCGAGTCTAGTACAGGTAAAAGTACGATTGTATTTACGG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTGATGAAAAGGTTATTTTAGAACTTGATGCACTGTATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TAGAATTAGACTCGCTATATAGCGAGTCTAGTACAGGT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTTGGACTTGGAGGTGAAGTATGTTAAAGGTAAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AATATGATTTTCAAATACTATAATAAGGAGGACTAACTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATGCATGGTAAAAATTTAATCTTATTTGATGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AATCAAGGAAATAATTAGGGATTTGCGCAAGTGCAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTGCAGTCTTCGTTTTTCTCTTCACGAGGCATTTAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TCATGTCACACTCCGACCAGCGAGCAGCTGGCGGAGTTAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGGACGGATTTACGTCCTTTGTAACAGGTCAGCTCTT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TAAAAAAAGCTATTAAATTTGAAAATAAGCATCAAAATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AATGAAGCCTACTATCTTATAGTAGGCTTCAGTGGCTTTCAGG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGGTAGGTTTAAAAAAATGAAAAAAGAGAGTAAAAAATTAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGGAACTGGACTACTCATAGGGTATATGCTCCAAACCCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGTACTTTATTGGAGTAAATATGTATCAAAAGAAGTAAA
GTCGCAATCCTTTATTCTTCAGGGAATTTTTCTAAC	CATATGATGAAAATAACGGTGTAGAGGTTGGGGTTGAGTGTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTAGACAGGCTACATATCTAATAAACTTAACATACAGTAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTCAAATCTTATAGACCCAACAAAGATACGTCCAGAAGCTA
GTCGCAATCCTTTATTCTTCAGGGAATTTTTCTAAC	AATGGATGGTTTTTCCATCCAGGGAATAAATGGGGTGCTC
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TCAAGAGATTTACTAGGAATGGAATGGATGGTTTTTCCATC
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTATGATTAGTCGAGAAGAGATTTATAGAATTTATCAAAAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CGATTGTATTTACGACTAATGGCAACAGGAACATCGCTAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TAGTCAATTTGCTTGAAGAGTGCAAAAAAAGCACTTTTCAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ACGAAACCTACTATAAAATAGTAGGTTTTTCAGGCTTCTTGG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAATGATAATGAAAATCATTGTACTATTGCTGACAAAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGAAAAAAGGTTAAAAAAGATGATCATTAGCGTTGATGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TATCCTCATTGCTATATGCATGGTAAAAATTTAATCTTAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GGAATATACAATATTGTGAAAGGAATGGTAGTTCCTGAGCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATTTTTTAGTTCTTCTTGAACTTCTGAAGAAGTACAAGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TAAGAAAAAAAGAAGATTTGAAACAATACAAATATGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATTTTTTAAGAGCTTTAATTATTTTATGGTTTTTTGCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TATTTATGCTTAATTCAGAAGATCCTGAATATTTTGAATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTGTCCTGCAAGGGACAAGATCTACAAGTACCACTGGGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GGAAATGGAGTAGCAGTTAAAAAGTCCAAGAGGTCAAAAATT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATTTGAAGCAGGGAATATGATATTAGCAATGAATGGAACTG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GTAGATTAATGTTATTTAACAAGATGGGAAAGGAATTGATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ACGTTGCCATCGACGTAGATGGTGACGTTTTTGGGTTTATAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGGGCCAGCAAGGACATTCCCTTGCCGGCTCGCCCAAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGTAGAAGAACAATATGGGTTGTACGTACCCAGATTTGG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTGTAAGATATGTGGAAGGGAAGTAGAAGAACAATATG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTAGGGTTGTTGCAACACAATGTAGACGAGGCTTTCAAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ACAGCTTATTGGGGCGTCGGTAATTTTCCTAAGTGTTTTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CGACCGTGAGGCCGTCCTTTTTGAGAGTATGGATGGGTCT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CATTAGTTTTTGGAACTTTGCCGAGGAGAAAGTATTCCT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTGAATACGTGAAGCACCATGGTGGTAGCTTCACAATAGGAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AGTTCAAGCAGATGACATCGTCCTTCAGGACGATGGCTCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CAAAACGGTGTATGCGGTTACGAATTAAAAGGATTTGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATGAACTTCCATATCTATACATCTTGGACGAATGTTGTCCA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGATATTTGGTCACTTGTTGCCATACTTAAGGAGTGTAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATATACACTCAATTTGGACGACCGTGAGGCCGTCCTTTTT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GTAAAAAATGAGGGTAATTTTTGAAAAAATTGTAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTGGAATTTTAATTCCGAGAAGGTCTTTCTCGGAAAGTGT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGGGAGCCTGTTATATACGGGCTCGACTACTTCAACAAATATAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGGTGTTGCGTACAATGTAGGTCTTGGAGAAATTCATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ACGTGCCATGTGTGTACGGTAACAAGTGGGTGTTTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TAATCATATGAATCCAAGAGAAGATGTAATCAAAATT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGTGATTGGCTCATTGGAGCTGGACAGATCCGTTTTATG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CAATTTTAGAGTCTTCGAACTTGAAGACTCTGATTTGCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTAAGACAGATAAGGAAGATTATTGATGAGAGAAAGAAAAAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTATTGATGAGAGAAAGAAAAATTGGCACGGGTTAGTAAAGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAATGTAAAATCAGCAGTTGAAAAAGTAGTCTCTGTACCA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CAAATTATTACTACAACAAAACCACAAGAAACAATACAGAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTGTAGAAGGCTTACAAGAAAAAATATTCTTGATATTCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTGGTGGCGCAGCGAGCGTATTATTTGCAAAAGAAAAGTCAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AATTTCTTCTTTAAAATAATCTTTCTCACTACTTCC
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATGAAAAATTATTCAAAATACATTCAAGACTGAAAAATGT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TATTGAAAGACAAAAATTTTATTTAATATCAAGGAAAATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATATTGATTCTGAAGTTTTTGGATTAAAGGGGGTGTTAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AGAAGGTAAATCTCTCAAACAGTTATTGAGAGAAATAC
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC

>NC_015499|3|2|1769728-1776837|PILER-CR
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GAGGACAAAAATGACTAATCTTTGGTGTTCTATTCACACT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AGGACGAGGCTATATTTTAAAAGAGTTTCAAGGGTTCATTAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTTCTAACATTAATATCAAAGATGAAATCAAAGAGTATGAAGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTTGGCAGGTGTGAACCTGCCTGCGAATTATTTTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATGGGGGAGGGATGTCGTCCAAGACAAGGACGGGTCAGTCCT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTTAAATGAAAGAAAAAAAATTAAGAAAGCTTGTTGTTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGAAAAAATGAAAGAAGCTGTTTCACTTCTTTTATCGATGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAAAAATGAAAAAATTAAAAATTTCTGAAATAGAGTCCTTT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATAAGATAGTAGGCTTTTCAGGTTTTTTGGCAGGCATAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTTTCTGGACCTGGAGGTGAAGTATGTTGAAGGTAAAGGGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGAAGAACTTAGAGAGATATTGAAAGACTTACGCCGGTGT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTCTCGCAACCTGCGATTTTTGTTTTCTCTTCACGAGGAGT
GTCGCAATCCTTTATTCTTCAGGGAATTTTTCTAAC	TAGAAGATAAAATTTAAAAAAAGGAGGACAAAAATGACTAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CAAGGCAGGGGTAAACCTGCCAAGAAGCTATTTCAAGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CGCGCCCTTCTTGGGGTGTGCACTTCTTAGTTCAGGAAATTT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TACGGGCTTTATGTCCCACTTTTCTACGCTTACTCTGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTTGGGAGGTGGTATCCGTATTACGAGGACCCCTCGTATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TACGGGCTTTATGTCCCACTTTTCTACGCTTACTCTGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TATAAGAGTTTCTTTGGTTTTCTTCGTCTTCTCCTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GCATGGGGGAGGAACGTCTTTATAGACGAGGACGGGTCC
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAACAAAAAAGTGAAATACTGGAAGAGGCTAAACGAAAATTG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGGAGGGGCAGCCATACTGTTATGAGTCGGAGCCTTACGAATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ACAATGAAATTGAAACTAGAGAGAAAAGTAGATTCACAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AGGACAAAAAGATGAAATTGACGAAAGTGGCTCCCACAGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GCGAGTCTAGTACAGGTAAAAGTACGATTGTATTTACGG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTGATGAAAAGGTTATTTTAGAACTTGATGCACTGTATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TAGAATTAGACTCGCTATATAGCGAGTCTAGTACAGGT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTTGGACTTGGAGGTGAAGTATGTTAAAGGTAAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AATATGATTTTCAAATACTATAATAAGGAGGACTAACTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATGCATGGTAAAAATTTAATCTTATTTGATGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AATCAAGGAAATAATTAGGGATTTGCGCAAGTGCAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTGCAGTCTTCGTTTTTCTCTTCACGAGGCATTTAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TCATGTCACACTCCGACCAGCGAGCAGCTGGCGGAGTTAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGGACGGATTTACGTCCTTTGTAACAGGTCAGCTCTT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TAAAAAAAGCTATTAAATTTGAAAATAAGCATCAAAATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AATGAAGCCTACTATCTTATAGTAGGCTTCAGTGGCTTTCAGG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGGTAGGTTTAAAAAAATGAAAAAAGAGAGTAAAAAATTAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGGAACTGGACTACTCATAGGGTATATGCTCCAAACCCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGTACTTTATTGGAGTAAATATGTATCAAAAGAAGTAAA
GTCGCAATCCTTTATTCTTCAGGGAATTTTTCTAAC	CATATGATGAAAATAACGGTGTAGAGGTTGGGGTTGAGTGTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTAGACAGGCTACATATCTAATAAACTTAACATACAGTAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTCAAATCTTATAGACCCAACAAAGATACGTCCAGAAGCTA
GTCGCAATCCTTTATTCTTCAGGGAATTTTTCTAAC	AATGGATGGTTTTTCCATCCAGGGAATAAATGGGGTGCTC
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TCAAGAGATTTACTAGGAATGGAATGGATGGTTTTTCCATC
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTATGATTAGTCGAGAAGAGATTTATAGAATTTATCAAAAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CGATTGTATTTACGACTAATGGCAACAGGAACATCGCTAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TAGTCAATTTGCTTGAAGAGTGCAAAAAAAGCACTTTTCAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ACGAAACCTACTATAAAATAGTAGGTTTTTCAGGCTTCTTGG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAATGATAATGAAAATCATTGTACTATTGCTGACAAAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGAAAAAAGGTTAAAAAAGATGATCATTAGCGTTGATGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TATCCTCATTGCTATATGCATGGTAAAAATTTAATCTTAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GGAATATACAATATTGTGAAAGGAATGGTAGTTCCTGAGCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATTTTTTAGTTCTTCTTGAACTTCTGAAGAAGTACAAGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TAAGAAAAAAAGAAGATTTGAAACAATACAAATATGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATTTTTTAAGAGCTTTAATTATTTTATGGTTTTTTGCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TATTTATGCTTAATTCAGAAGATCCTGAATATTTTGAATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTGTCCTGCAAGGGACAAGATCTACAAGTACCACTGGGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GGAAATGGAGTAGCAGTTAAAAAGTCCAAGAGGTCAAAAATT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATTTGAAGCAGGGAATATGATATTAGCAATGAATGGAACTG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GTAGATTAATGTTATTTAACAAGATGGGAAAGGAATTGATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ACGTTGCCATCGACGTAGATGGTGACGTTTTTGGGTTTATAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGGGCCAGCAAGGACATTCCCTTGCCGGCTCGCCCAAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGTAGAAGAACAATATGGGTTGTACGTACCCAGATTTGG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTGTAAGATATGTGGAAGGGAAGTAGAAGAACAATATG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTAGGGTTGTTGCAACACAATGTAGACGAGGCTTTCAAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ACAGCTTATTGGGGCGTCGGTAATTTTCCTAAGTGTTTTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CGACCGTGAGGCCGTCCTTTTTGAGAGTATGGATGGGTCT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CATTAGTTTTTGGAACTTTGCCGAGGAGAAAGTATTCCT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTGAATACGTGAAGCACCATGGTGGTAGCTTCACAATAGGAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AGTTCAAGCAGATGACATCGTCCTTCAGGACGATGGCTCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CAAAACGGTGTATGCGGTTACGAATTAAAAGGATTTGAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATGAACTTCCATATCTATACATCTTGGACGAATGTTGTCCA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGATATTTGGTCACTTGTTGCCATACTTAAGGAGTGTAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATATACACTCAATTTGGACGACCGTGAGGCCGTCCTTTTT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	GTAAAAAATGAGGGTAATTTTTGAAAAAATTGTAAG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTGGAATTTTAATTCCGAGAAGGTCTTTCTCGGAAAGTGT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAGGGAGCCTGTTATATACGGGCTCGACTACTTCAACAAATATAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGGTGTTGCGTACAATGTAGGTCTTGGAGAAATTCATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ACGTGCCATGTGTGTACGGTAACAAGTGGGTGTTTA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TAATCATATGAATCCAAGAGAAGATGTAATCAAAATT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TGTGATTGGCTCATTGGAGCTGGACAGATCCGTTTTATG
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CAATTTTAGAGTCTTCGAACTTGAAGACTCTGATTTGCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTAAGACAGATAAGGAAGATTATTGATGAGAGAAAGAAAAAT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTATTGATGAGAGAAAGAAAAATTGGCACGGGTTAGTAAAGA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AAATGTAAAATCAGCAGTTGAAAAAGTAGTCTCTGTACCA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CAAATTATTACTACAACAAAACCACAAGAAACAATACAGAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	CTGTAGAAGGCTTACAAGAAAAAATATTCTTGATATTCAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TTGGTGGCGCAGCGAGCGTATTATTTGCAAAAGAAAAGTCAAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AATTTCTTCTTTAAAATAATCTTTCTCACTACTTCC
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATGAAAAATTATTCAAAATACATTCAAGACTGAAAAATGT
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	TATTGAAAGACAAAAATTTTATTTAATATCAAGGAAAATA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	ATATTGATTCTGAAGTTTTTGGATTAAAGGGGGTGTTAAA
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC	AGAAGGTAAATCTCTCAAACAGTTATTGAGAGAAATAC
GTCGCAATCCCTTATTCTTCAGGGAATTTTTCTAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_015499.1|WP_013757060.1|1784636_1787360_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl|CDD|187811
NC_015499.1|WP_013757057.1|1782382_1783315_-|hypothetical-protein	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	gnl|CDD|273866
NC_015499.1|WP_041438044.1|1769321_1769591_-|hypothetical-protein	unknown	unknown	unknown
NC_015499.1|WP_013757052.1|1777862_1778111_-|hypothetical-protein	unknown	unknown	unknown
NC_015499.1|WP_154645350.1|1768436_1768694_-|hypothetical-protein	unknown	unknown	unknown
NC_015499.1|WP_013757046.1|1764817_1765762_-|biotin-synthase-BioB	unknown	unknown	gnl|CDD|273075
NC_015499.1|WP_013757053.1|1778158_1778452_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NC_015499.1|WP_041438721.1|1767645_1768386_+|N-acyl-homoserine-lactonase-family-protein	unknown	unknown	gnl|CDD|293815
NC_015499.1|WP_013757043.1|1761626_1761956_-|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl|CDD|238042
NC_015499.1|WP_013757044.1|1762211_1763507_+|magnesium-transporter	unknown	unknown	gnl|CDD|225148
NC_015499.1|WP_013757058.1|1783359_1784037_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|187815
NC_015499.1|WP_013757047.1|1765878_1766769_+|phosphate-starvation-inducible-PsiE-family-protein	unknown	unknown	gnl|CDD|381274
NC_015499.1|WP_013757059.1|1784055_1784634_-|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cls001490_csm2gr11_CAS-III-A	gnl|CDD|367635
NC_015499.1|WP_013757042.1|1760848_1761415_+|DJ-1/PfpI-family-protein	unknown	unknown	gnl|CDD|153243
NC_015499.1|WP_013757048.1|1766761_1767421_-|flavodoxin-family-protein	unknown	unknown	gnl|CDD|223728
NC_015499.1|WP_013757056.1|1781319_1782390_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	mkCas0182_csm5gr7_CAS-III-A	gnl|CDD|187793
NC_015499.1|WP_013757054.1|1778448_1779483_-|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|376633
NC_015499.1|WP_013757051.1|1777146_1777836_-|PD-(D/E)XK-nuclease-family-protein	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl|CDD|378929
NC_015499.1|WP_041438719.1|1763514_1764768_+|Nramp-family-divalent-metal-transporter	unknown	unknown	gnl|CDD|334596
NC_015499.1|WP_013757055.1|1779479_1781342_-|DNA-primase-small-subunit	PrimPol	COG4951_PrimPol_CAS-I:CAS-III	gnl|CDD|227287

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_015499.1|WP_013757060.1|1784636_1787360_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	3.4e-130	430.2	18.4
NC_015499.1|WP_013757057.1|1782382_1783315_-|hypothetical-protein	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	7.4e-69	227.2	0.0
NC_015499.1|WP_013757055.1|1779479_1781342_-|DNA-primase-small-subunit	PrimPol	COG4951_PrimPol_CAS-I:CAS-III	4.6e-24	79.8	0.1
NC_015499.1|WP_013757054.1|1778448_1779483_-|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	1.4e-89	295.0	1.3
NC_015499.1|WP_013757059.1|1784055_1784634_-|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cls001490_csm2gr11_CAS-III-A	2e-132	433.6	17.9
NC_015499.1|WP_013757053.1|1778158_1778452_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	9.4e-28	91.0	0.8
NC_015499.1|WP_013757058.1|1783359_1784037_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	3.8e-71	234.0	0.0
NC_015499.1|WP_013757043.1|1761626_1761956_-|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	1e-21	72.3	0.1
NC_015499.1|WP_013757051.1|1777146_1777836_-|PD-(D/E)XK-nuclease-family-protein	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	1.2e-12	43.1	0.1
NC_015499.1|WP_013757056.1|1781319_1782390_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	mkCas0182_csm5gr7_CAS-III-A	1.4e-33	111.1	16.9

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_015499.1|WP_013757057.1|1782382_1783315_-|hypothetical-protein	gnl|CDD|273866	TIGR01903, Hypothetical_protein., CRISPR type III-A/MTUBE-associated RAMP protein Csm4. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm4, for CRISPR/cas Subtype Mtube, protein 4.	1.56971e-13
NC_015499.1|WP_013757060.1|1784636_1787360_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl|CDD|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	2.15599e-112
NC_015499.1|WP_013757046.1|1764817_1765762_-|biotin-synthase-BioB	gnl|CDD|273075	TIGR00433, biotin_synthase, biotin synthase. Catalyzes the last step of the biotin biosynthesis pathway. All members of the seed alignment are in the immediate gene neighborhood of a bioA gene. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin].	1.69963e-144
NC_015499.1|WP_013757053.1|1778158_1778452_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	8.8502e-27
NC_015499.1|WP_041438721.1|1767645_1768386_+|N-acyl-homoserine-lactonase-family-protein	gnl|CDD|293815	cd07729, AHL_lactonase_MBL-fold, quorum-quenching N-acyl-homoserine lactonase, MBL-fold metallo-hydrolase domain. Acyl Homoserine Lactones (also known as AHLs) are signal molecules which coordinate gene expression in quorum sensing, in many Gram-negative bacteria. Quorum-quenching N-acyl-homoserine lactonase (also known as AHL lactonase, N-acyl-L-homoserine lactone hydrolase, EC 3.1.1.81) catalyzes the hydrolysis and opening of the homoserine lactone rings of AHLs, a reaction that can block quorum sensing. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	3.76584e-65
NC_015499.1|WP_013757043.1|1761626_1761956_-|winged-helix-turn-helix-transcriptional-regulator	gnl|CDD|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	4.15438e-20
NC_015499.1|WP_013757044.1|1762211_1763507_+|magnesium-transporter	gnl|CDD|225148	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism].	6.56724e-64
NC_015499.1|WP_013757058.1|1783359_1784037_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl|CDD|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	2.09269e-81
NC_015499.1|WP_013757047.1|1765878_1766769_+|phosphate-starvation-inducible-PsiE-family-protein	gnl|CDD|381274	cd14761, GS_GsGCS-like, Globin sensor domain of Geobacter sulfurreducens globin-coupled-sensor and related proteins. GsGCS is a GCS of unknown function, comprised of an N-terminal globin sensor domain and a C- terminal transmembrane signal-transduction domain. For GCSs in general, the first signal O2 binds to/dissociates from the heme iron complex inducing a structural change in the globin domain, which is then transduced to the functional domain, switching on (or off) the function of the latter. Ferric GsGCS is bis-histidyl hexa-coordinated (provided by a His residue located at the E11 topological site, as distinct from the E7 site). Ferrous GsGCS is a penta- and hexa-coordinated mixture. The C-terminal domains of other members of this subfamily include histidine kinase, and PsiE domains.	6.93999e-69
NC_015499.1|WP_013757059.1|1784055_1784634_-|type-III-A-CRISPR-associated-protein-Csm2	gnl|CDD|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	8.11705e-06
NC_015499.1|WP_013757042.1|1760848_1761415_+|DJ-1/PfpI-family-protein	gnl|CDD|153243	cd03169, GATase1_PfpI_1, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	3.92273e-91
NC_015499.1|WP_013757048.1|1766761_1767421_-|flavodoxin-family-protein	gnl|CDD|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	1.10468e-26
NC_015499.1|WP_013757056.1|1781319_1782390_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl|CDD|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	8.60984e-18
NC_015499.1|WP_013757054.1|1778448_1779483_-|CRISPR-associated-endonuclease-Cas1	gnl|CDD|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.26766e-111
NC_015499.1|WP_013757051.1|1777146_1777836_-|PD-(D/E)XK-nuclease-family-protein	gnl|CDD|378929	pfam12705, PDDEXK_1, PD-(D/E)XK nuclease superfamily. Members of this family belong to the PD-(D/E)XK nuclease superfamily.	4.49624e-18
NC_015499.1|WP_041438719.1|1763514_1764768_+|Nramp-family-divalent-metal-transporter	gnl|CDD|334596	pfam01566, Nramp, Natural resistance-associated macrophage protein. The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2. The NRAMP family is a novel family of functional related proteins defined by a conserved hydrophobic core of ten transmembrane domains. This family of membrane proteins are divalent cation transporters. Nramp1 is an integral membrane protein expressed exclusively in cells of the immune system and is recruited to the membrane of a phagosome upon phagocytosis. By controlling divalent cation concentrations Nramp1 may regulate the interphagosomal replication of bacteria. Mutations in Nramp1 may genetically predispose an individual to susceptibility to diseases including leprosy and tuberculosis conversely this might however provide protection form rheumatoid arthritis. Nramp2 is a multiple divalent cation transporter for Fe2+, Mn2+ and Zn2+ amongst others it is expressed at high levels in the intestine; and is major transferrin-independent iron uptake system in mammals. The yeast proteins Smf1 and Smf2 may also transport divalent cations.	2.8652e-95
NC_015499.1|WP_013757055.1|1779479_1781342_-|DNA-primase-small-subunit	gnl|CDD|227287	COG4951, COG4951, Uncharacterized protein conserved in bacteria [Function unknown].	2.16639e-20

Protein sequences

>NC_015499.1|WP_041438044.1|1769321_1769591_-|hypothetical-protein
MPEKELFLSSFLESRKITSDCLISYNGNRYSVPHYFSGKEAWVTTYKGIKLYIYSQTKKLIAEHTIPKNKGNIVINKSHRGIDDRTNKS
>NC_015499.1|WP_154645350.1|1768436_1768694_-|hypothetical-protein
MDQDFSEKLAKKFLIESELVKKISKNIRKKDFKNIKDSLISELVEEYYEFSKQIGYSIQLNALLGPYCILNISQKFWKKYNDKFA
>NC_015499.1|WP_041438721.1|1767645_1768386_+|N-acyl-homoserine-lactonase-family-protein
MTYKIHPIVLGSKSFDKSMMTYQFNYGKPFVIPIYSWYIEGGDKSILIDTGEFMPLKSKDREDALGAKIYSFEEGLGKYGLTPEGIDIVIHTHLHNDHCENDSKCKNATFYVHENELKQIHNPHPLDYRYMEDFILDVEENNQIVTLKGDTDILPGIKTIYTPAHSPGGMSVLINTEKGKVLITGFCVIDENFNPPPQVLGMGMEVIPPGTLINSYEAYDILVKVKELADIIVPLHEPRFAKIETI
>NC_015499.1|WP_013757048.1|1766761_1767421_-|flavodoxin-family-protein
MNLLAINGSPRKDFNTGTLLKYSIEGAVSKGANAEIVHLYDLNYKGCASCFNCKLKGGKNYGRCSVKDELEPILKKIEEDVDALILGSPIYFSSVTGQMRCFLERLLFPYMVYDENYSTLFKRKMPVGFIYTMGVNEKMMEELSYKKIFERTEFMISRVFGSVEVMYVTDTYQFTDYSKYVAPKFDVEAKERRRREVFPKDCQRAYEMGKRFAESIMAK
>NC_015499.1|WP_013757047.1|1765878_1766769_+|phosphate-starvation-inducible-PsiE-family-protein
MESSESIKKIYNFKETDKDNLESLCAAARQNVDNFIENLYNFLSTFPDYHKFLGKQEVRKRHEEKFKVWFIDLFCGKYDESYIIRIQKIGQVHADMGLPTHYVSATMSFIRNYIHQRILLSCPNEEERKNCRESVDKILDINLDILTSSYVDENKIYIARTKIESKIVRISSKISYYFDIALILALVFTSFMIFVLFLSDIYNFLRSASSFETSVVNILGAMLIIWTIRELLEEELKRLKGKKFALNIFISLAMAAMLRKILIFSLEPHNSVEVIVLGFLVLILGIVYWLMNKSAI
>NC_015499.1|WP_013757046.1|1764817_1765762_-|biotin-synthase-BioB
MIDLENFDPESKLNESAIYGLLNLDTDRLLMIAKRIKEKYVSSFELCSIISYKTGSCSENCSFCAQSSYFNTGVEFKKVSVEEVIAKAKLMKRYGSKRFSLVSSGKGPSKADMDDLLPIFERLKREVDIDLCASLGIIGERDLNRLKEVGVSTYHHNLETSRSFFGNICSTHSYDERIDTIEAVKRAGLIPCVGGIVGLGETFEQRIEFAITLKNLGIKSVPFNILIPIKGTPLEGLELLDRSEILKTLAIFRIVLPYATIRLCAGRESVLGKYQKLALNSAANALMIGGYLTRPGEEIEKDLELIGSLELIKV
>NC_015499.1|WP_041438719.1|1763514_1764768_+|Nramp-family-divalent-metal-transporter
MENKLSLFRRILLFLTIMGPGIITANVDNDAGGITTYSVTGATTGYKLLWVLIPMTIALIVVQEMAARMGAVTRKGLADLIRENFGVKMTFLILLGILVADFGNTISEFAGIAASMEIFNITKYISVPICALFVWWTVLKGSYKFVERIFLFACLVYLCYIPSAFMANPPWGEVAKNIVIPHIEFSPSFLSVLIGFIGTTITPWMQFYIQSSTVEKGLTEKEYKYLRLDVITGNIMTNVIALFIVVSCAATLFVHNVNISDAKDAALALKPFAGNLASTLFAIGLFNASIFSACILPLATAYYVCEALGFNAGLDFTWKEAPVFYSLTTFLIMVGAIAILMPNAPLVPIMFWSQVINGVILPFVLLYMLKIINNKDIMGEYTNSKTFNIIAWLTTIILIILTLLMVITSIFPNLLPS
>NC_015499.1|WP_013757044.1|1762211_1763507_+|magnesium-transporter
MSFTSAITEFYLSQELNKPIIDYENKKVAHLRDIAVCWDKKVPIGRGIKFLKDSNKLININHIKEWTKDAIVLATSLEKAADIVARDEDIYIVKWFLDKQLIDLKGKKLVRVNDIKISFYSKDLEKKLILLAIDVGFSGILRRLGIKFLESKIQPQLISWNYLAPIKKRTSNLQLATEFEGLKDLHPADIADIIEELSQPDREKIIESLDIESAAEVLAEADIETQVNVIDSLDAERAADILEEMPSDDAADILSELDEEKSQEILEHMDPEEANEVIELMNYEDEDVGSLMTKDYITLTGDETSEEALNKIKKMAEEVETIYVSYVVDSEEKLIGVVSLRELLIAKPDEKIKDIMQKNVISLNHFDHHDKALEMFAKYNLFTMPVIDNENRLLGIITVDDVLRLLMPDRSDTDTFSRFDSLKKFLREGGE
>NC_015499.1|WP_013757043.1|1761626_1761956_-|winged-helix-turn-helix-transcriptional-regulator
MKKVLVYQLISEIFKTLAHPLRIQILMMLSEKERCVCELLNEIGVEQSNLSQHLRILKKQGIIDSRKDGQKMFYRINLPSVLNLVSDAKKTLNDQAKGHEELYKTIKNI
>NC_015499.1|WP_013757042.1|1760848_1761415_+|DJ-1/PfpI-family-protein
MPKVLILTGDCAEDYEVKVPQQALMLLGYDVEISAPNKRAGDMLQLVVHDFTNLDTYIELTGHRIPVDIATKDVNVEDYIGLVIPGGRAPEYIRRYNEVVEVTKKFFALNKPVAAICHGSQLLAACGVLSGRKVTSYPACATECMIAGANWVDQDVVVDNNLITAQAWPNHPLWLREFVKLLGAKIEI
>NC_015499.1|WP_013757051.1|1777146_1777836_-|PD-(D/E)XK-nuclease-family-protein
MNLSPSSLNLLLTCPFAYKLKYIDRVQPKFNINTIAGSAFHFALSKYFKTNRYDFESSWKEYRNYNPEVLSLSFNEEDKIKNNLFAMLKIYEPFARDLKVISSEEPFNIDINDIGFKGIVDAITEDSIIDFKTTNRIPSDITSSHIIQTSIYSILTGIDKVELHYISEKRVVIYKTQVSSEMKEKTLMLIENVKDILENKIFLPNGLVHPYACKYCSVSNFCYFVNGIS
>NC_015499.1|WP_013757052.1|1777862_1778111_-|hypothetical-protein
MKKNLKIIFLLVFLVLLTVFVLNSTKLKTANANYKENIALVCFYKGEMQSTFNKVCFYDCLGTVYAINIKSYKICPLTIDRD
>NC_015499.1|WP_013757053.1|1778158_1778452_-|CRISPR-associated-endonuclease-Cas2
MSIKAYSFYVISYDVVEDRKRYKIAKLLEGKGTRVQKSVFECYLTEKELIKLNKEIMKKINPETDSVRIYLLCKRCKAAISVLGNGVPQELSEYDIL
>NC_015499.1|WP_013757054.1|1778448_1779483_-|CRISPR-associated-endonuclease-Cas1
MILYIVEHGTRIHKDLDRFDIFRGSELIRSYPASQIESIVIMANASFTPHAINYILKNNIDAVFLSSKGLYRGRLVGGMPRNVELRIKQFKLYMNEKFKVEFSKKIVFGKANNCKYLLQRYNWERRNSKVKDCIIKIKSLIAKLEFTDDIDQIRGIEGKIASIYFEALANLFIHKEFKFFGRNRRPPLDPINALMSFLYVLLYQRVESVLYECSLDPYLGFFHTTDYSKPSLALDLMEEFRALVDGLVLRLINKNIFSSEDFWYKEEYLEDDNAKEVNSVEAVYLNIEGVKKALVYFQELLEKNKYISTLGNNINLFQIIREQARIFVRCLSENETYKPFIQKQ
>NC_015499.1|WP_013757055.1|1779479_1781342_-|DNA-primase-small-subunit
MKPTQIIELFSSGKEKEAYEAIVSCAPFIEIKDSEFHFEIYKILLCFDLLSLAEKELELSIRDDKRNLKAILAMAEMYIEDSRLDKAEKLFLNSIERMPGEAELYVRYGSFLEMQEKTQAAIALYKKAFENTGESIFNSLIKDRENSYIGSSDVEEKDILEPEDRHILKFLQLFRGREGIYARQWKNARGEQGYSPISEPFTIGVAKNHILGNLTVGVYQLRIDNSVCFIVFDIDVEKSKLLDYFQKPTERRKIDSLLLSTAQEIYNICTSLDIFSYIEDSGYKGRHVWVFLRQGIQAHKAKKFGNYIISKLGKLSKEINIELFPKQTFVKSGGLGNLVKLPLGIHIKSGRRSIFLNPDGTEPENQLMFLMDIKLNEREKLKNFVDSIEISNLDASVNKNFEIEMKNEIDKIVTDEDIKALTPLQGKYTEPEEFKLDENLEYLILKSSCPVLGILCDKALSGIGLNSLEIQVITFTLGNLEFGNFIVNELLTKAGVSDTRLYLKKPLRSNPMSCNKIKNLIPNITSNYCVECFSLKKIFTYPNPLIHLHKKDNFSKLDTLILRLIDLSKKKEEIDVIYQSTLSLVTNELRKIDVKERQIGSYKIFFDDENMLRLLDSNEK
>NC_015499.1|WP_013757056.1|1781319_1782390_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MAKRQIFETKTYNLKILSPIHIGTGEDMDPMDYVYKDKKLYKISSDTFFNILEKRGLKEKIIKENISKLNIKTIARNINDIFDRNNDDYVYYIEIEDSLEGSFATRYFNPDAQMQIGLTLRSGDDIIIPGSSTKGAIRTAFLNFLSEQYNSEVYNNLLQGRNLMLEKDDERNLKNIINDPFKFVSVSDVSISNETRIVEMFRVGSKGKGIPIVKEVIVPNKDKNNNLTISIKTNLRDCWNNKPLNLPKLKKELINLDLKTLLEKTDRFYRSLLKVEKDVYKRAYPSFDNSFFALIDKEKGYLIRLGFGCGNLSYTIKGCSKEVKPGKTRFLVSLKNKMLPLGYAILTEKNEAYTDH
>NC_015499.1|WP_013757057.1|1782382_1783315_-|hypothetical-protein
MNLFKISIRPTSFFHTPLRSDIIWGHICWAIFRLKEELELKDFLDKYKKGNFPIVVSDVFPEGYLPAPKYPGIIRYFSETKVDIDLKELKKAKYIPVSIYEKLKESFEAFLEGLKIYFSNDEDKISSCFLNFDEWHCSINRLTGIVEEGMLFSKECMVAREEVKPIVYVKTLFDKSYIEEIFKFIGENGYGADASVGRGRFEFDISDATLPESKKPNSFIALSHGFESLSEFKRCFYDVEVKFGKVGNNISKNPFKRPVVNFKPGSLFILKENSEPKAAYGRIKDSVHSSIDFVHECSLLFPFFVRWQDG
>NC_015499.1|WP_013757058.1|1783359_1784037_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MLTYKNLTGKIYCVTGLRVGTSTGSVEIGGNDNPVIRNPYNDEPYIPGSSIKGKVRSILEWALGKVSGDGKTHSCGEPDCPICNIFGISASNSIEADSNSPRIARAIFRDAFLTNNTKKWLKDRDIVKFTEIKYENFINRCTAKAENPRPIERIPAGAEFDFSLSFRMFKEDDKEYWKTLLCGLKLLENDSLGGCGSRGYGRIKFSELKDETGQDMLEQLRSINI
>NC_015499.1|WP_013757059.1|1784055_1784634_-|type-III-A-CRISPR-associated-protein-Csm2
MFNVPKKRNLTNSSGSYGQQSAARQNFQQSNAGGINDFVEFSYKSYDEFLKKAEEFAENLAGDGEDLGKSQLRKFYDDVINLRDEMINKLNNNKEEKKDKEINVDEIINEIIFKLKLLQARVIYLANRKKTNKKTYINSNARKYLLGILERGITLCRQNEGDIKKIISALKKFSNEFEAIYAYFYQFSKDKD
>NC_015499.1|WP_013757060.1|1784636_1787360_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MIDSRKEFQTIALAALFHDIGKVLNRTKDGYGKNHTDLTKQFLDELMKRCENIKEFVDESIFSHIASHHHEGASKLFKPKELSGERERFLATIISRADNFSSSERYDDEDANQSDRSRSRMRSIFYNLKFENVQEVNLEDGFYEIRELEPESVFLKKESQLNREGTQFAYKELAKKITDNIIRIEAGDNFNLFFSSVLSILEKYLALIPSSTQVDKQDISLFDHLSTTSAIACAYYLFIKDNQINKVSDLDKLETDESVKPFVVLQGDVSGIQNFILKIKGSNPRGLAKTLRGRSFYISALSRAVSLKIINDFELVQSNIFLDAGGKFSILLPNTTYVKKRISEISKELDKFFFSEFAGLLSLNLTEPVELGVKDFVVEDEKKKKGFRSIFEQVNFNNQIAKSNKFFSLFKDEVLSDKYLEDFYKKLKKAEDLCELCGTFPKDEGSNKCKICKIMENIGTKITKEKFWAIYSINNKNCVNEIMPGVCLEILEKEEEIKEKLYDSFVVDRFFDVGREEAIIGARRWINNYLPRGKDFDIDIGSEEPKKDTLCYLCNDRCHVEKQEYDEIVRENVKYGPLTFQCIATYSRFLASNNQAERTGEDHLGVLKADVDNLGKLFKDSMKEKFSISRVATVSRFLNYFFTEVLQDIIEKDENKKFKAIYTVYSGGDDLFLIGPWIILPDFALHLSKKFREFTGRDAITFSCAIEMFRPRSSIGRAVEIVDRSLEMSKSGHLTFEEDTCREFKNKNNNKNKIKGNITVFKNTVRLFKRNPDEFGFEELLQYRDRLCELCKNNGEKEAGALINKAFLYRLLSIYRPMFLRAKGYEERGGYIKCIDKNVISYRYIPLLKRDIKRNIVKDRKDKDLVEKKLTDIKVLMELDDKKVGQFYMKNLKIPVFLTLYKLRGGE

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK496802	Capybara microvirus Cap3_SP_470, complete genome	3001-3035	5	0.857
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP040048	Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence	292489-292523	5	0.857
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP053843	Campylobacter corcagiensis strain LMG 27932 plasmid pCCORG, complete sequence	38212-38246	5	0.857
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP053843	Campylobacter corcagiensis strain LMG 27932 plasmid pCCORG, complete sequence	634-668	5	0.857
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	KU878088	Bacillus phage AR9, complete genome	116271-116305	5	0.857
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MF360957	Bacillus virus PBS1, complete genome	26573-26607	5	0.857
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP022047	Staphylococcus sciuri strain FDAARGOS_285 plasmid unnamed1, complete sequence	52802-52836	5	0.857
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP038615	Arsenophonus nasoniae strain FIN plasmid pArsFIN3, complete sequence	64359-64393	6	0.829
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NC_042038	Enterobacteriophage phiKP26, complete genome	45570-45604	6	0.829
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	KF771238	Escherichia phage bV_EcoS_AHS24, complete genome	42305-42339	6	0.829
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	KT825490	Escherichia phage C119, complete genome	38638-38672	6	0.829
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	KF771236	Escherichia phage bV_EcoS_AHP24, complete genome	42304-42338	6	0.829
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP024272	Escherichia coli strain F8111-1SC3 plasmid unnamed3, complete sequence	107792-107826	6	0.829
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP024274	Escherichia coli strain F9792 plasmid unnamed, complete sequence	58491-58525	6	0.829
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	LN908840	Escherichia coli plasmid pCss_E1373	142644-142678	6	0.829
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP024227	Escherichia coli O169:H41 strain 2014EL-1345-2 plasmid unnamed4, complete sequence	71838-71872	6	0.829
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP024265	Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed2, complete sequence	51394-51428	6	0.829
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	275460-275494	6	0.829
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP053834	Arcobacter cloacae strain LMG 26153 plasmid pACLO, complete sequence	183606-183640	6	0.829
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	105693-105727	6	0.829
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NZ_CP054441	Staphylococcus saprophyticus strain UTI-058y plasmid pUTI-058y-1, complete sequence	33738-33771	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NZ_CP007500	Staphylococcus aureus strain 2395 USA500 plasmid pUSA500, complete sequence	23838-23871	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NC_005054	Staphylococcus aureus plasmid pLW043, complete sequence	3407-3440	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NZ_LR735422	Staphylococcus epidermidis strain none isolate Se_BPH0697 plasmid 2	22838-22871	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NZ_LR735438	Staphylococcus epidermidis strain none isolate Se_BPH0723 plasmid 2	19221-19254	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NC_013338	Staphylococcus aureus plasmid SAP068A, complete sequence	48301-48334	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NZ_LR027875	Staphylococcus aureus strain BPH2056 isolate BPH2056 plasmid 2	13482-13515	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NC_012547	Staphylococcus aureus plasmid pGO1, complete sequence	47870-47903	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NC_013320	Staphylococcus aureus plasmid SAP014A, complete sequence	26759-26792	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NC_013343	Staphylococcus aureus plasmid SAP080A, complete sequence	41601-41634	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NC_014369	Staphylococcus aureus plasmid pSK1, complete sequence	15631-15664	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NZ_CP025497	Staphylococcus aureus subsp. aureus strain 3020.C01 plasmid p3020.C01b, complete sequence	26172-26205	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NZ_CP016860	Staphylococcus aureus subsp. aureus strain 1969.N plasmid p1969.Nb, complete sequence	26172-26205	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NZ_CP012121	Staphylococcus aureus subsp. aureus strain USA300_2014.C02 plasmid pC02, complete sequence	26173-26206	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	MN909556	Staphylococcus saprophyticus strain 1005578 plasmid p1005578_vga, complete sequence	21455-21488	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NZ_AP017321	Staphylococcus aureus strain MI plasmid pMI, complete sequence	37528-37561	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NZ_CP026963	Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1	51202-51235	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NZ_CP031887	Staphylococcus aureus strain CFSAN082783 plasmid pMRSA_24, complete sequence	29076-29109	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NZ_CP029167	Staphylococcus aureus strain SVH7513 plasmid pSVH7513a	19143-19176	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NC_005566	Staphylococcus epidermidis SK398 plasmid pSK639, complete sequence	6806-6839	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NZ_MH587574	Staphylococcus aureus strain WBG10514 plasmid pWBG731, complete sequence	52280-52313	7	0.794
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NC_029119	Staphylococcus phage SPbeta-like, complete genome	126487-126520	7	0.794
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NC_011246	Borrelia recurrentis A1 plasmid pl124, complete sequence	16673-16707	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907243	Escherichia phage vB_EcoS-2005III, complete genome	15317-15351	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907263	Escherichia phage vB_EcoS-26174I, partial sequence	18992-19026	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907274	Escherichia phage vB_EcoS-2862III, complete genome	34617-34651	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907275	Escherichia phage vB_EcoS-2862IV, complete genome	40715-40749	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907227	Escherichia phage vB_EcoS-12210III, complete genome	41373-41407	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907246	Escherichia phage vB_EcoS-2006IV, complete genome	24404-24438	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907261	Escherichia phage vB_EcoS-26047I, complete genome	18364-18398	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907276	Escherichia phage vB_EcoS-2862V, complete genome	409-443	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907231	Escherichia phage vB_EcoS-12397IV, complete genome	40164-40198	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907273	Escherichia phage vB_EcoS-2862II, complete genome	34989-35023	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907262	Escherichia phage vB_EcoS-26047II, complete genome	34837-34871	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907233	Escherichia phage vB_EcoS-12469I, complete genome	35648-35682	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907256	UNVERIFIED: Escherichia phage vB_EcoS-26046I, complete genome	28636-28670	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907244	Escherichia phage vB_EcoS-2005IV, complete genome	38993-39027	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907266	UNVERIFIED: Escherichia phage vB_EcoS-26174IV, complete genome	39663-39697	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907249	Escherichia phage vB_EcoS-25988IV, complete genome	28374-28408	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907245	Escherichia phage vB_EcoS-2006III, complete genome	42459-42493	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907242	UNVERIFIED: Escherichia phage vB_EcoS-2004V, complete genome	387-421	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK372342	Enterobacteria phage vB_EcoS_IME542, complete genome	13589-13623	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907247	Escherichia phage vB_EcoS-2006V, complete genome	2408-2442	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907265	UNVERIFIED: Escherichia phage vB_EcoS-26174III, complete genome	9044-9078	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907234	UNVERIFIED: Escherichia phage vB_EcoS-12469II, complete genome	29278-29312	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MT511058	Escherichia phage vB_EcoD_SU57, complete genome	138-172	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907264	Escherichia phage vB_EcoS-26174II, complete genome	27588-27622	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907251	Escherichia phage vB_EcoS-26020I, complete genome	27418-27452	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907253	Escherichia phage vB_EcoS-26020III, complete genome	22166-22200	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907232	UNVERIFIED: Escherichia phage vB_EcoS-12397V, complete genome	16142-16176	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907250	UNVERIFIED: Escherichia phage vB_EcoS-25988V, complete genome	44044-44078	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907254	Escherichia phage vB_EcoS-26020IV, complete genome	3436-3470	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907228	Escherichia phage vB_EcoS-12397I, complete genome	27280-27314	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907252	Escherichia phage vB_EcoS-26020II, complete genome	11339-11373	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907230	Escherichia phage vB_EcoS-12397III, complete genome	3551-3585	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907229	Escherichia phage vB_EcoS-12397II, complete genome	12484-12518	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907272	Escherichia phage vB_EcoS-2862I, complete genome	36583-36617	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907260	Escherichia phage vB_EcoS-26046V, complete genome	36070-36104	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MN840485	Escherichia phage 2725-N35, complete genome	36318-36352	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NC_049813	Escherichia phage vB_EcoS-12210I, complete genome	29424-29458	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907258	UNVERIFIED: Escherichia phage vB_EcoS-26046III, complete genome	104-138	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907259	Escherichia phage vB_EcoS-26046IV, complete genome	43956-43990	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907255	Escherichia phage vB_EcoS-26020V, complete genome	34729-34763	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907240	Escherichia phage vB_EcoS-2004III, complete genome	31437-31471	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907248	Escherichia phage vB_EcoS-25988I, complete genome	41063-41097	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907257	Escherichia phage vB_EcoS-26046II, complete genome	43952-43986	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907241	Escherichia phage vB_EcoS-2004IV, complete genome	33312-33346	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MK907235	Escherichia phage vB_EcoS-12469III, complete genome	33828-33862	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_LT667502	Buchnera aphidicola strain BCifornacula isolate 2912 plasmid pTrp	2554-2588	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	398116-398150	7	0.8
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	LN866850	Staphylococcus capitis CR01 plasmid CR01, complete sequence	2526-2560	7	0.8
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NC_019507	Campylobacter phage CP21, complete genome	47742-47775	8	0.765
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	MT932329	Campylobacter phage F379, complete genome	110640-110673	8	0.765
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	HE815464	Campylobacter phage CP21 complete sequence	47742-47775	8	0.765
NC_015499_1	1.39|809606|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	809606-809640	35	NZ_AP019830	Leptotrichia wadei strain JCM16777 plasmid pJCM16777-1, complete sequence	31326-31360	8	0.771
NC_015499_1	1.67|811473|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811473-811507	35	MN693779	Marine virus AFVG_250M346, complete genome	40939-40973	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MF630922	Escherichia phage IMM-001, complete genome	247-281	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MN693113	Marine virus AFVG_25M241, complete genome	11728-11762	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MN694164	Marine virus AFVG_250M1189, complete genome	46526-46560	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MG065688	UNVERIFIED: Campylobacter phage A110b, complete genome	34331-34365	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MH622943	Myoviridae sp. isolate ctbc_4, complete genome	125510-125544	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	MF158042	Shigella phage Sd1, complete genome	42914-42948	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP017574	Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence	137585-137619	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP024772	Bacillus thuringiensis LM1212 plasmid pLM1, complete sequence	129235-129269	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP015333	Borrelia hermsii HS1 isolate Browne Mountain plasmid lpV47, complete sequence	36052-36086	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NC_010933	Bacillus cereus strain G9241 plasmid pBC210, complete sequence	118496-118530	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP015592	Bacillus cereus strain AR156 plasmid pAR460, complete sequence	438794-438828	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP009940	Bacillus cereus strain 03BB87 plasmid pBCX01, complete sequence	69081-69115	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP022346	Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence	215704-215738	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP009368	Bacillus cereus strain FM1 plasmid unnamed, complete sequence	382135-382169	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP009591	Bacillus cereus G9241 plasmid pBC210, complete sequence	38521-38555	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP041074	Bacillus tropicus strain LM1212-W3 plasmid p1, complete sequence	106518-106552	8	0.771
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NC_028248	Escherichia phage slur16, complete genome	98212-98246	8	0.771
NC_015499_3	3.29|1771825|35|NC_015499|CRISPRCasFinder,CRT,PILER-CR	1771825-1771859	35	GU075905	Prochlorococcus phage P-HM2, complete genome	105251-105285	8	0.771
NC_015499_3	3.54|1773720|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR	1773720-1773758	39	CP003185	Thermoanaerobacterium saccharolyticum JW/SL-YS485 plasmid pMU3262, complete genome	51848-51886	8	0.795
NC_015499_3	3.54|1773720|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR	1773720-1773758	39	NC_019956	Thermoanaerobacterium thermosaccharolyticum M0795 plasmid pTHETHE01, complete sequence	1196-1234	8	0.795
NC_015499_3	3.76|1775400|36|NC_015499|CRISPRCasFinder,CRT,PILER-CR	1775400-1775435	36	NZ_CP050186	Bacillus thuringiensis strain HER1410 plasmid pLUSID3, complete sequence	11930-11965	8	0.778
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	MN694670	Marine virus AFVG_250M589, complete genome	25162-25195	9	0.735
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	NC_023584	Synechococcus phage S-MbCM100, complete genome	9320-9353	9	0.735
NC_015499_1	1.25|808671|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	808671-808704	34	MN480762	Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence	173038-173071	9	0.735
NC_015499_1	1.67|811473|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811473-811507	35	MK356558	Salmonella sp. strain Sa1423 plasmid pSa1423-160k, complete sequence	55029-55063	9	0.743
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NC_024789	Escherichia phage bV_EcoS_AKS96, complete genome	41814-41848	9	0.743
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP013709	Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence	1844-1878	9	0.743
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP025841	Escherichia coli strain 214-4 plasmid p214_4_132, complete sequence	34373-34407	9	0.743
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP032118	Acinetobacter lwoffii strain ED45-23 plasmid pALWED2.3, complete sequence	9681-9715	9	0.743
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP013844	Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence	38008-38042	9	0.743
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP024248	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed3, complete sequence	106843-106877	9	0.743
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	AP014654	Escherichia coli O169:H41 plasmid pEntYN10 DNA, complete sequence	35497-35531	9	0.743
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	217722-217756	9	0.743
NC_015499_2	2.1|815167|32|NC_015499|CRISPRCasFinder	815167-815198	32	MK408758	Campylobacter phage CP20, complete genome	159580-159611	9	0.719
NC_015499_2	2.1|815167|32|NC_015499|CRISPRCasFinder	815167-815198	32	FN667789	Campylobacter phage CPt10, complete genome	160354-160385	9	0.719
NC_015499_3	3.29|1771825|35|NC_015499|CRISPRCasFinder,CRT,PILER-CR	1771825-1771859	35	NZ_CP020439	Streptococcus equinus strain FDAARGOS_251 plasmid unamed1 sequence	45264-45298	9	0.743
NC_015499_3	3.29|1771825|35|NC_015499|CRISPRCasFinder,CRT,PILER-CR	1771825-1771859	35	NZ_CP020439	Streptococcus equinus strain FDAARGOS_251 plasmid unamed1 sequence	230665-230699	9	0.743
NC_015499_3	3.31|1771971|32|NC_015499|CRISPRCasFinder,CRT,PILER-CR	1771971-1772002	32	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	773862-773893	9	0.719
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	LR214956	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 2	11339-11372	10	0.706
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	LR214964	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 10	79014-79047	10	0.706
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	LR214968	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 14	7291-7324	10	0.706
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	LR214959	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 5	1326-1359	10	0.706
NC_015499_1	1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807731-807764	34	AY583235	Mycoplasma phage phiMFV1, complete genome	10828-10861	10	0.706
NC_015499_1	1.13|807862|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	807862-807896	35	NC_019728	Calothrix sp. PCC 6303 plasmid pCAL6303.02, complete sequence	13819-13853	10	0.714
NC_015499_1	1.25|808671|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	808671-808704	34	MN693160	Marine virus AFVG_25M377, complete genome	29612-29645	10	0.706
NC_015499_1	1.31|809074|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT	809074-809110	37	MN694049	Marine virus AFVG_250M506, complete genome	28893-28929	10	0.73
NC_015499_1	1.71|811743|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811743-811776	34	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	182865-182898	10	0.706
NC_015499_1	1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT	811943-811977	35	NC_014534	Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence	289098-289132	10	0.714
NC_015499_3	3.31|1771971|32|NC_015499|CRISPRCasFinder,CRT,PILER-CR	1771971-1772002	32	MT457553	Shewanella phage Thanatos-2, complete genome	88028-88059	10	0.688
NC_015499_1	1.51|810401|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT	810401-810436	36	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	892486-892521	11	0.694
NC_015499_1	1.25|808671|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT	808671-808704	34	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	2524948-2524981	12	0.647

1. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK496802 (Capybara microvirus Cap3_SP_470, complete genome) position: , mismatch: 5, identity: 0.857

tatattttttattttttttattattattatatata	CRISPR spacer
attattttttattttttttattattatattatatt	Protospacer
  *************************  ***** 

2. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040048 (Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.857

tatattttttattttttttattattattatatata-	CRISPR spacer
ttttttttttattttttttattattaata-atatct	Protospacer
* * ********************** ** ****  

3. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053843 (Campylobacter corcagiensis strain LMG 27932 plasmid pCCORG, complete sequence) position: , mismatch: 5, identity: 0.857

tatattttttattttttttattatta-ttatatata	CRISPR spacer
tatattatttattttttatattattagttatagct-	Protospacer
****** ********** ******** *****  * 

4. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053843 (Campylobacter corcagiensis strain LMG 27932 plasmid pCCORG, complete sequence) position: , mismatch: 5, identity: 0.857

tatattttttattttttttattatta-ttatatata	CRISPR spacer
tatattatttattttttatattattagttatagct-	Protospacer
****** ********** ******** *****  * 

5. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to KU878088 (Bacillus phage AR9, complete genome) position: , mismatch: 5, identity: 0.857

tatattttttattttttttattattattatatata-	CRISPR spacer
taaattttttatcttttttattattaaga-atataa	Protospacer
** *********.*************  * ***** 

6. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MF360957 (Bacillus virus PBS1, complete genome) position: , mismatch: 5, identity: 0.857

tatattttttattttttttattattattatatata-	CRISPR spacer
taaattttttatcttttttattattaaga-atataa	Protospacer
** *********.*************  * ***** 

7. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022047 (Staphylococcus sciuri strain FDAARGOS_285 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.857

-tatattttttattttttttattattattatatata	CRISPR spacer
ttata-ttagtattttttttattagtattatttata	Protospacer
 **** **  ************** ****** ****

8. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038615 (Arsenophonus nasoniae strain FIN plasmid pArsFIN3, complete sequence) position: , mismatch: 6, identity: 0.829

tatattttttattttttttattattattatatata	CRISPR spacer
tatatcttttattttttttattagtattatcgcca	Protospacer
*****.***************** ******   .*

9. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_042038 (Enterobacteriophage phiKP26, complete genome) position: , mismatch: 6, identity: 0.829

tatattt---tttattttttttattattattatatata	CRISPR spacer
---atttagatttattattattattattattatatatg	Protospacer
   ****   ****** ** *****************.

10. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to KF771238 (Escherichia phage bV_EcoS_AHS24, complete genome) position: , mismatch: 6, identity: 0.829

tatattt---tttattttttttattattattatatata	CRISPR spacer
---atttagatttattattattattattattatatatg	Protospacer
   ****   ****** ** *****************.

11. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to KT825490 (Escherichia phage C119, complete genome) position: , mismatch: 6, identity: 0.829

tatattt---tttattttttttattattattatatata	CRISPR spacer
---atttagatttattattattattattattatatatg	Protospacer
   ****   ****** ** *****************.

12. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to KF771236 (Escherichia phage bV_EcoS_AHP24, complete genome) position: , mismatch: 6, identity: 0.829

tatattt---tttattttttttattattattatatata	CRISPR spacer
---atttagatttattattattattattattatatatg	Protospacer
   ****   ****** ** *****************.

13. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024272 (Escherichia coli strain F8111-1SC3 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.829

tatattttttattttttttattattattatatata-	CRISPR spacer
ctttttttttgctttttttattattattat-tatat	Protospacer
. * ******..****************** **** 

14. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024274 (Escherichia coli strain F9792 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.829

tatattttttattttttttattattattatatata-	CRISPR spacer
ctttttttttgctttttttattattattat-tatat	Protospacer
. * ******..****************** **** 

15. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to LN908840 (Escherichia coli plasmid pCss_E1373) position: , mismatch: 6, identity: 0.829

tatattttttattttttttattattattatatata-	CRISPR spacer
ctttttttttgctttttttattattattat-tatat	Protospacer
. * ******..****************** **** 

16. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024227 (Escherichia coli O169:H41 strain 2014EL-1345-2 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.829

tatattttttattttttttattattattatatata-	CRISPR spacer
ctttttttttgctttttttattattattat-tatat	Protospacer
. * ******..****************** **** 

17. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024265 (Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.829

tatattttttattttttttattattattatatata-	CRISPR spacer
ctttttttttgctttttttattattattat-tatat	Protospacer
. * ******..****************** **** 

18. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 6, identity: 0.829

tatattttttattttttttattattat-tatatata	CRISPR spacer
tatattttttattatatttattattacgtattttt-	Protospacer
************* * **********. *** * * 

19. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053834 (Arcobacter cloacae strain LMG 26153 plasmid pACLO, complete sequence) position: , mismatch: 6, identity: 0.829

tatattttttattttttttattattattatatata-	CRISPR spacer
tatattttttatttttttatttatt-tcatatcttt	Protospacer
******************  ***** *.**** *  

20. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 6, identity: 0.829

tatattttttattttttttattattattata-tata	CRISPR spacer
tatattttttaatgtttttattatttctttagtat-	Protospacer
*********** * *********** .* ** *** 

21. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054441 (Staphylococcus saprophyticus strain UTI-058y plasmid pUTI-058y-1, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

22. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007500 (Staphylococcus aureus strain 2395 USA500 plasmid pUSA500, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

23. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_005054 (Staphylococcus aureus plasmid pLW043, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

24. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR735422 (Staphylococcus epidermidis strain none isolate Se_BPH0697 plasmid 2) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

25. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR735438 (Staphylococcus epidermidis strain none isolate Se_BPH0723 plasmid 2) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

26. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_013338 (Staphylococcus aureus plasmid SAP068A, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

27. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR027875 (Staphylococcus aureus strain BPH2056 isolate BPH2056 plasmid 2) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

28. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_012547 (Staphylococcus aureus plasmid pGO1, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

29. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_013320 (Staphylococcus aureus plasmid SAP014A, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

30. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_013343 (Staphylococcus aureus plasmid SAP080A, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

31. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_014369 (Staphylococcus aureus plasmid pSK1, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

32. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025497 (Staphylococcus aureus subsp. aureus strain 3020.C01 plasmid p3020.C01b, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

33. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016860 (Staphylococcus aureus subsp. aureus strain 1969.N plasmid p1969.Nb, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

34. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012121 (Staphylococcus aureus subsp. aureus strain USA300_2014.C02 plasmid pC02, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

35. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MN909556 (Staphylococcus saprophyticus strain 1005578 plasmid p1005578_vga, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

36. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017321 (Staphylococcus aureus strain MI plasmid pMI, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

37. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026963 (Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

38. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031887 (Staphylococcus aureus strain CFSAN082783 plasmid pMRSA_24, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

39. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029167 (Staphylococcus aureus strain SVH7513 plasmid pSVH7513a) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

40. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_005566 (Staphylococcus epidermidis SK398 plasmid pSK639, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

41. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH587574 (Staphylococcus aureus strain WBG10514 plasmid pWBG731, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

42. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_029119 (Staphylococcus phage SPbeta-like, complete genome) position: , mismatch: 7, identity: 0.794

aaatttctttaaattttttgatgtcttctgttac-	CRISPR spacer
tacgttctttaaattttttcatttcttct-ttata	Protospacer
 *  *************** ** ****** ***. 

43. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata-	CRISPR spacer
tatatttgttattttttttatttttg-tgtagagag	Protospacer
******* ************** **. *.** * * 

44. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907243 (Escherichia phage vB_EcoS-2005III, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

45. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907263 (Escherichia phage vB_EcoS-26174I, partial sequence) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

46. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907274 (Escherichia phage vB_EcoS-2862III, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

47. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907275 (Escherichia phage vB_EcoS-2862IV, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

48. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907227 (Escherichia phage vB_EcoS-12210III, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

49. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907246 (Escherichia phage vB_EcoS-2006IV, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

50. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907261 (Escherichia phage vB_EcoS-26047I, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

51. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907276 (Escherichia phage vB_EcoS-2862V, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

52. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907231 (Escherichia phage vB_EcoS-12397IV, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

53. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907273 (Escherichia phage vB_EcoS-2862II, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

54. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907262 (Escherichia phage vB_EcoS-26047II, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

55. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907233 (Escherichia phage vB_EcoS-12469I, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

56. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907256 (UNVERIFIED: Escherichia phage vB_EcoS-26046I, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

57. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907244 (Escherichia phage vB_EcoS-2005IV, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

58. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907266 (UNVERIFIED: Escherichia phage vB_EcoS-26174IV, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

59. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907249 (Escherichia phage vB_EcoS-25988IV, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

60. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907245 (Escherichia phage vB_EcoS-2006III, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

61. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907242 (UNVERIFIED: Escherichia phage vB_EcoS-2004V, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

62. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK372342 (Enterobacteria phage vB_EcoS_IME542, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

63. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907247 (Escherichia phage vB_EcoS-2006V, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

64. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907265 (UNVERIFIED: Escherichia phage vB_EcoS-26174III, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

65. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907234 (UNVERIFIED: Escherichia phage vB_EcoS-12469II, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

66. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MT511058 (Escherichia phage vB_EcoD_SU57, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

67. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907264 (Escherichia phage vB_EcoS-26174II, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

68. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907251 (Escherichia phage vB_EcoS-26020I, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

69. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907253 (Escherichia phage vB_EcoS-26020III, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

70. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907232 (UNVERIFIED: Escherichia phage vB_EcoS-12397V, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

71. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907250 (UNVERIFIED: Escherichia phage vB_EcoS-25988V, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

72. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907254 (Escherichia phage vB_EcoS-26020IV, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

73. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907228 (Escherichia phage vB_EcoS-12397I, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

74. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907252 (Escherichia phage vB_EcoS-26020II, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

75. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907230 (Escherichia phage vB_EcoS-12397III, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

76. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907229 (Escherichia phage vB_EcoS-12397II, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

77. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907272 (Escherichia phage vB_EcoS-2862I, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

78. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907260 (Escherichia phage vB_EcoS-26046V, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

79. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MN840485 (Escherichia phage 2725-N35, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

80. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_049813 (Escherichia phage vB_EcoS-12210I, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

81. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907258 (UNVERIFIED: Escherichia phage vB_EcoS-26046III, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

82. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907259 (Escherichia phage vB_EcoS-26046IV, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

83. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907255 (Escherichia phage vB_EcoS-26020V, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

84. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907240 (Escherichia phage vB_EcoS-2004III, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

85. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907248 (Escherichia phage vB_EcoS-25988I, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

86. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907257 (Escherichia phage vB_EcoS-26046II, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

87. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907241 (Escherichia phage vB_EcoS-2004IV, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

88. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK907235 (Escherichia phage vB_EcoS-12469III, complete genome) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactttattattattattattattatatata	Protospacer
. * * .****** ** ******************

89. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT667502 (Buchnera aphidicola strain BCifornacula isolate 2912 plasmid pTrp) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
ttaattttttttttcttttattattattattatta	Protospacer
*  ******* ***.***************   **

90. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata-----	CRISPR spacer
aatattttttatttttttta-----attttatatattcca	Protospacer
 *******************     *** ******     

91. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to LN866850 (Staphylococcus capitis CR01 plasmid CR01, complete sequence) position: , mismatch: 7, identity: 0.8

tatattttttattttttttattattattatatata	CRISPR spacer
ttttttttttttttttttttttattattattgaaa	Protospacer
* * ****** ******** **********  * *

92. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_019507 (Campylobacter phage CP21, complete genome) position: , mismatch: 8, identity: 0.765

aaatttctttaaattttttgatgtcttctgttac	CRISPR spacer
atttttctttaaattttttaatttcttttaataa	Protospacer
*  ****************.** ****.*. ** 

93. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MT932329 (Campylobacter phage F379, complete genome) position: , mismatch: 8, identity: 0.765

aaatttctttaaattttttgatgtcttctgttac	CRISPR spacer
atttttctttaaattttttaatttcttttaataa	Protospacer
*  ****************.** ****.*. ** 

94. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to HE815464 (Campylobacter phage CP21 complete sequence) position: , mismatch: 8, identity: 0.765

aaatttctttaaattttttgatgtcttctgttac	CRISPR spacer
atttttctttaaattttttaatttcttttaataa	Protospacer
*  ****************.** ****.*. ** 

95. spacer 1.39|809606|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019830 (Leptotrichia wadei strain JCM16777 plasmid pJCM16777-1, complete sequence) position: , mismatch: 8, identity: 0.771

caacatttttttctaacattgcaatatttatttta	CRISPR spacer
tatcaagattttctaacattgcattatttatattt	Protospacer
.* **   *************** ******* ** 

96. spacer 1.67|811473|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MN693779 (Marine virus AFVG_250M346, complete genome) position: , mismatch: 8, identity: 0.771

gctttacaaaaagaaacagaccaaaccaatttagc	CRISPR spacer
ggttctaaaaaagaaacaaaccaaacaaattttga	Protospacer
* **.  ***********.******* ***** * 

97. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MF630922 (Escherichia phage IMM-001, complete genome) position: , mismatch: 8, identity: 0.771

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactatattattattattattattatatata	Protospacer
. * * .* **** ** ******************

98. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MN693113 (Marine virus AFVG_25M241, complete genome) position: , mismatch: 8, identity: 0.771

tatattttttattttttttattattattatatata	CRISPR spacer
gccattttttatttttttatttattattattaatt	Protospacer
  .***************  **********  ** 

99. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MN694164 (Marine virus AFVG_250M1189, complete genome) position: , mismatch: 8, identity: 0.771

tatattttttattttttttattattattatatata	CRISPR spacer
ctttctctatattatttatattattattatatata	Protospacer
. * .*.* **** *** *****************

100. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MG065688 (UNVERIFIED: Campylobacter phage A110b, complete genome) position: , mismatch: 8, identity: 0.771

tatattttttattttttttattattattatatata	CRISPR spacer
attttactatattattattattattattatatata	Protospacer
  * * .* **** ** ******************

101. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MH622943 (Myoviridae sp. isolate ctbc_4, complete genome) position: , mismatch: 8, identity: 0.771

tatattttttattttttttattattattatatata	CRISPR spacer
ttctattactattttttatattattattttatata	Protospacer
* .  ** .******** ********** ******

102. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 8, identity: 0.771

tatattttttattttttttattattattatatata	CRISPR spacer
cttttactctattattattattattattatatata	Protospacer
. * * .*.**** ** ******************

103. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017574 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence) position: , mismatch: 8, identity: 0.771

tatattttttattttttttattattattatatata	CRISPR spacer
tatattttttactttttttcttatttacttgttta	Protospacer
***********.******* *****  . *.* **

104. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024772 (Bacillus thuringiensis LM1212 plasmid pLM1, complete sequence) position: , mismatch: 8, identity: 0.771

tatattttttattttttttattattattatatata	CRISPR spacer
tatattttttatatttcttattatttatgcagatt	Protospacer
************ ***.********  *..* ** 

105. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015333 (Borrelia hermsii HS1 isolate Browne Mountain plasmid lpV47, complete sequence) position: , mismatch: 8, identity: 0.771

tatattttttattttttttattattattatatata	CRISPR spacer
caaatttcttattctttttattattattttttcaa	Protospacer
.* ****.*****.************** * *  *

106. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_010933 (Bacillus cereus strain G9241 plasmid pBC210, complete sequence) position: , mismatch: 8, identity: 0.771

tatattttttattttttttattattattatatata	CRISPR spacer
tatattttttactttttttcttatttacttgttta	Protospacer
***********.******* *****  . *.* **

107. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015592 (Bacillus cereus strain AR156 plasmid pAR460, complete sequence) position: , mismatch: 8, identity: 0.771

tatattttttattttttttattattattatatata	CRISPR spacer
tatattttttactttttttcttatttacttgttta	Protospacer
***********.******* *****  . *.* **

108. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009940 (Bacillus cereus strain 03BB87 plasmid pBCX01, complete sequence) position: , mismatch: 8, identity: 0.771

tatattttttattttttttattattattatatata	CRISPR spacer
tatattttttactttttttcttatttacttgttta	Protospacer
***********.******* *****  . *.* **

109. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022346 (Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

tatat-tttttattttttttattattattatatata	CRISPR spacer
-acacatttttattttttttatttgtattattttga	Protospacer
 *.*. *****************  ****** *  *

110. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009368 (Bacillus cereus strain FM1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.771

tatattttttattttttttattattattatatata	CRISPR spacer
tatattttttactttttttcttatttacttgttta	Protospacer
***********.******* *****  . *.* **

111. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009591 (Bacillus cereus G9241 plasmid pBC210, complete sequence) position: , mismatch: 8, identity: 0.771

tatattttttattttttttattattattatatata	CRISPR spacer
tatattttttactttttttcttatttacttgttta	Protospacer
***********.******* *****  . *.* **

112. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041074 (Bacillus tropicus strain LM1212-W3 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.771

tatattttttattttttttattattattatatata	CRISPR spacer
tatattttttatatttcttattatttatgcagatt	Protospacer
************ ***.********  *..* ** 

113. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_028248 (Escherichia phage slur16, complete genome) position: , mismatch: 8, identity: 0.771

tatattttttattttttttattattattatatata	CRISPR spacer
tagatcttttattttttttattatttagttatttt	Protospacer
** **.*******************    *** * 

114. spacer 3.29|1771825|35|NC_015499|CRISPRCasFinder,CRT,PILER-CR matches to GU075905 (Prochlorococcus phage P-HM2, complete genome) position: , mismatch: 8, identity: 0.771

tttggacttg-----gaggtgaagtatgttaaaggtaaag	CRISPR spacer
-----aattggtaatgaggtgatgtatgtaaaaggtaaag	Protospacer
     * ***     ******* ****** **********

115. spacer 3.54|1773720|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR matches to CP003185 (Thermoanaerobacterium saccharolyticum JW/SL-YS485 plasmid pMU3262, complete genome) position: , mismatch: 8, identity: 0.795

attttttagttcttcttgaacttctgaagaagtacaaga-	CRISPR spacer
attttctatttcttcttgaacttctgaaactg-acagcat	Protospacer
*****.** *******************.  * ***. * 

116. spacer 3.54|1773720|39|NC_015499|CRISPRCasFinder,CRT,PILER-CR matches to NC_019956 (Thermoanaerobacterium thermosaccharolyticum M0795 plasmid pTHETHE01, complete sequence) position: , mismatch: 8, identity: 0.795

attttttagttcttcttgaacttctgaagaagtacaaga-	CRISPR spacer
attttctatttcttcttgaacttctgaaactg-acagcat	Protospacer
*****.** *******************.  * ***. * 

117. spacer 3.76|1775400|36|NC_015499|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050186 (Bacillus thuringiensis strain HER1410 plasmid pLUSID3, complete sequence) position: , mismatch: 8, identity: 0.778

gtaaaaaatgagggtaatttttgaaaaaattgtaag	CRISPR spacer
ttaagaaatgagggtaacttttgaaaattataaaag	Protospacer
 ***.************.*********   *. ***

118. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MN694670 (Marine virus AFVG_250M589, complete genome) position: , mismatch: 9, identity: 0.735

aaatttctttaaattttttgatgtcttctgttac	CRISPR spacer
gattttctttaaaatttttaatgtcttgttcatc	Protospacer
.* ********** *****.******* * .  *

119. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_023584 (Synechococcus phage S-MbCM100, complete genome) position: , mismatch: 9, identity: 0.735

aaatttctttaaattttttgatgtc--ttctgttac	CRISPR spacer
aaatttatttaaattatttgatgttggacctgca--	Protospacer
****** ******** ********.   .***.   

120. spacer 1.25|808671|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MN480762 (Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence) position: , mismatch: 9, identity: 0.735

gtcgataagaaaaatttataaatatgaacaaaaa	CRISPR spacer
aaagataagaaaaatttgtaaaaatgactagaat	Protospacer
.  **************.**** **** .*.** 

121. spacer 1.67|811473|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MK356558 (Salmonella sp. strain Sa1423 plasmid pSa1423-160k, complete sequence) position: , mismatch: 9, identity: 0.743

gctttacaaaaagaaacagaccaaaccaatttagc---	CRISPR spacer
gctttacaaaaaaaaaaagaccaa---agctgaacgcg	Protospacer
************.*** *******   *..* *.*   

122. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_024789 (Escherichia phage bV_EcoS_AKS96, complete genome) position: , mismatch: 9, identity: 0.743

tatattttttattttttttattattattatatata	CRISPR spacer
ctttagatttattattattattattattatatatg	Protospacer
. *    ****** ** *****************.

123. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 9, identity: 0.743

tatattttttattttttttattattattatatata	CRISPR spacer
catattttttattttgtttattagtaaaagtaatc	Protospacer
.************** ******* **  *   ** 

124. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025841 (Escherichia coli strain 214-4 plasmid p214_4_132, complete sequence) position: , mismatch: 9, identity: 0.743

---tatattttttattttttttattattattatatata	CRISPR spacer
gcttttttttgctttttttattattattattatat---	Protospacer
   * * *** .* ***** ***************   

125. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032118 (Acinetobacter lwoffii strain ED45-23 plasmid pALWED2.3, complete sequence) position: , mismatch: 9, identity: 0.743

tatattttttattttttttattattattatatata	CRISPR spacer
agatttttttatttttattaatattattattaaca	Protospacer
 .  ************ *** *********  *.*

126. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 9, identity: 0.743

tatattttttattttttttattattattatatata	CRISPR spacer
catattttttattttgtttattagtaaaagtaatc	Protospacer
.************** ******* **  *   ** 

127. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024248 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.743

---tatattttttattttttttattattattatatata	CRISPR spacer
gcttttttttgctttttttattattattattatat---	Protospacer
   * * *** .* ***** ***************   

128. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to AP014654 (Escherichia coli O169:H41 plasmid pEntYN10 DNA, complete sequence) position: , mismatch: 9, identity: 0.743

---tatattttttattttttttattattattatatata	CRISPR spacer
gcttttttttgctttttttattattattattatat---	Protospacer
   * * *** .* ***** ***************   

129. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 9, identity: 0.743

tatattttttattttttttattatta-----ttatatata	CRISPR spacer
aatatattttaatttttttattattaggctgctat-----	Protospacer
 **** ***** **************     .***     

130. spacer 2.1|815167|32|NC_015499|CRISPRCasFinder matches to MK408758 (Campylobacter phage CP20, complete genome) position: , mismatch: 9, identity: 0.719

caaatggaaatttgcagggttctggccaagca	CRISPR spacer
aaaatggagttttgcagggttctgtgatttca	Protospacer
 *******. **************      **

131. spacer 2.1|815167|32|NC_015499|CRISPRCasFinder matches to FN667789 (Campylobacter phage CPt10, complete genome) position: , mismatch: 9, identity: 0.719

caaatggaaatttgcagggttctggccaagca	CRISPR spacer
aaaatggagttttgcagggttctgtgatttca	Protospacer
 *******. **************      **

132. spacer 3.29|1771825|35|NC_015499|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020439 (Streptococcus equinus strain FDAARGOS_251 plasmid unamed1 sequence) position: , mismatch: 9, identity: 0.743

tttggacttggaggtgaagtatgttaaaggtaaag	CRISPR spacer
ataggaattggaggtgaagtatgttcaatattgtg	Protospacer
 * *** ****************** ** .* . *

133. spacer 3.29|1771825|35|NC_015499|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020439 (Streptococcus equinus strain FDAARGOS_251 plasmid unamed1 sequence) position: , mismatch: 9, identity: 0.743

tttggacttggaggtgaagtatgttaaaggtaaag	CRISPR spacer
ataggaattggaggtgaagtatgttcaatattgtg	Protospacer
 * *** ****************** ** .* . *

134. spacer 3.31|1771971|32|NC_015499|CRISPRCasFinder,CRT,PILER-CR matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 9, identity: 0.719

atgcatggtaaaaatttaatcttatttgatga	CRISPR spacer
acagttggtaaaaattcaattttatttgtata	Protospacer
*..  ***********.***.*******   *

135. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to LR214956 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.706

aaatttctttaaattttttgatgtcttctgttac	CRISPR spacer
tagtctctttaaatttttttatttcttcttcagt	Protospacer
 *.*.************** ** ****** . ..

136. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to LR214964 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 10) position: , mismatch: 10, identity: 0.706

aaatttctttaaattttttgatgtcttctgttac	CRISPR spacer
tagtctctttaaatttttttatttcttcttcagt	Protospacer
 *.*.************** ** ****** . ..

137. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to LR214968 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 14) position: , mismatch: 10, identity: 0.706

aaatttctttaaattttttgatgtcttctgttac	CRISPR spacer
tagtctctttaaatttttttatttcttcttcagt	Protospacer
 *.*.************** ** ****** . ..

138. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to LR214959 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 5) position: , mismatch: 10, identity: 0.706

aaatttctttaaattttttgatgtcttctgttac	CRISPR spacer
tagtctctttaaatttttttatttcttcttcagt	Protospacer
 *.*.************** ** ****** . ..

139. spacer 1.11|807731|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to AY583235 (Mycoplasma phage phiMFV1, complete genome) position: , mismatch: 10, identity: 0.706

aaatttctttaaattttttgatgtcttctgttac	CRISPR spacer
tagtctctttaaatttttttatttcttcttcagt	Protospacer
 *.*.************** ** ****** . ..

140. spacer 1.13|807862|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_019728 (Calothrix sp. PCC 6303 plasmid pCAL6303.02, complete sequence) position: , mismatch: 10, identity: 0.714

agctttttcacaaaaattttcatcattttatccac	CRISPR spacer
agctttttcacaaaaattctcagcatcctgagtta	Protospacer
******************.*** ***..*.  .  

141. spacer 1.25|808671|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MN693160 (Marine virus AFVG_25M377, complete genome) position: , mismatch: 10, identity: 0.706

gtcgataagaaaaatttataaatatgaacaaaaa	CRISPR spacer
agaattaagaaaaatatataaagatgaactgaca	Protospacer
.  . ********** ****** ****** .* *

142. spacer 1.31|809074|37|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to MN694049 (Marine virus AFVG_250M506, complete genome) position: , mismatch: 10, identity: 0.73

aaagcaatgaaagaatatagagaaatttcacttcaga	CRISPR spacer
aaagcaatggaagaatatcgagaaatgttagagctag	Protospacer
*********.******** ******* *.*   * ..

143. spacer 1.71|811743|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.706

tattgatatcctaactgagcaaaaatatttttaa	CRISPR spacer
atttcatatcctaattgagcaaaaatcacaaaaa	Protospacer
  ** *********.***********  .   **

144. spacer 1.74|811943|35|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NC_014534 (Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence) position: , mismatch: 10, identity: 0.714

tatattttttattttttttattattattatatata	CRISPR spacer
agaattttttattatttttattaatatttgagctt	Protospacer
 . ********** ********* ****  *  * 

145. spacer 3.31|1771971|32|NC_015499|CRISPRCasFinder,CRT,PILER-CR matches to MT457553 (Shewanella phage Thanatos-2, complete genome) position: , mismatch: 10, identity: 0.688

atgcatggtaaaaatttaatcttatttgatga	CRISPR spacer
acaagaagtagaaatttcatcttatttgattt	Protospacer
*.. . .***.****** ************  

146. spacer 1.51|810401|36|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 11, identity: 0.694

gacgataagaaaaacttataaatataaacaaaaaaa	CRISPR spacer
gcaagctgaaaaagcttataaatataaacaaataag	Protospacer
*  ... ..****.****************** **.

147. spacer 1.25|808671|34|NC_015499|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 12, identity: 0.647

gtcgataagaaaaatttataaatatgaacaaaaa	CRISPR spacer
tcatcctggaaaaatttataaatattcacaaatc	Protospacer
 .   . .*****************  *****  

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	73838 : 84391	8	uncultured_Caudovirales_phage(33.33%)	transposase	NA
DBSCAN-SWA_2	761372 : 770510	9	Micromonas_pusilla_virus(16.67%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NC_015499|73838:84391|DBSCAN-SWA
TATGGGACTGTTAGCTTTGTTGTGGCTTTATAAAATTTCTAAGACAGGGTCTTATACACTACTTAAGAACGCTCTGAAAGAGGCAGGGATGGAATCAACTGGAATAATAGATACGAGAGTGCTAACTAATTTATTAAAAGGTGAATTTTTGCTTGACGATGGAGCGCTGACAGCTGGAAAAAGTGCAAATAGAATTTCAGATGGCATGGACCCAAATAGTGCAATAGGTAAAAGTACTGCTGAACTGTTGGGCGCAATTATAGGTGGAATGTTAGGTGGACCAATAGGATCACTGATTCTAAGTGAGGCTTTTTCTCAGCTTGGTGGATTTCTCTGGGACAGATTTGAAGATGGATCGATTTTAAAGATATTGGATGAATGGGCATTAGCAAACCAAAATCCAGGATACGCATATCCTAAAACAGTTCAAAGCCTTCTTGGTCAAGGCATCCTTCATACAGATCCATTAGTAATAGACCTTAGTGGAAAAGGAATAAGACTTACAGATATAAATAGCTCTAAAGCTATGTTTGATCTAACAGGTTCAGGATTTGCAAATAAGGTAGGATGGATAACAAATGATGAAGGCTTTTTAGTCCTGGATAAAAACAACAATGGTAAAGTAGATGACATATCAGAGATGTTTGGTAACAGCTCTACTTCTGGCTTTCAGTCTTTATCTGCTTACGATGCAAATAAAGATGGAAAGATAGACTCATCTAATCCTATCTTTAAAGACTTAAAAGTATGGCAGGATACAAACAACGATGGCATAACTGAACCTGGAGAACTAAAGAGCCTTTCTGAACTTGGAATAAAGTCAATTAGCCTTAATGCACAGAGAACTAATATAACCCAAAATGGAAATCAGATAACACAAATAGCTTCAGTAGAAAAGGAAGATGGCACTACTCTTCAAGCAGCAGACGTAAACCTTACACTGAACAAGCTATATAGCTACTACAACAAAGACGTCCAGCTAAACCCTGATATATTAGGACTTCCCTGGATAAAAGGATATGGCTTTATGCCAGATCTACCCATTGCCATGAGCCTTGATACAACCCTTCTTAACATGGTGTCATCCGCCGTGCTAAACTGCACCACCAACGCACAGTAAAAGTGCACCAGTAGAATTTGTGTGTTATGCTCTCTCAAATTCATATAAGTGTAAATTTTCATGTAAAATAGACCCAGTTTTTTCATGAAAAATGACCCACCTTAATATAAAATACCCTACAAAATTTTTTGTAGGGAGGATAAGAGGTGTTAAGGATGGAAGATTGGGTAACAATAATTAATCTGAAGAAACGTAATCCAAGTATGGGAACAAGAAAGATTGCAAAGATTCTGGGAGTATCTCGCAATACTGTAAAAAGGGCTCTTAAGAGTGAAACCTATCCTTCCTATGAGCGGGGAAAGATGGTTTACAAGGAGCTTGAACCATTTCATGAGTTTATCAAAGAGGCCTTTATCTTTAAAAGACAACGAGTATCTGTAATTATATCTAACCTGAAATCTAAAGGTTACAATGGCTCTAGCATAGCTGTTTACCGTTACATTAATGAACATTTCAAAGAGTTAAAAAAGGATATTTCTACAAAAACATACGAACCATATGAAACATCTCCTGGTGAACAAATGCAATATGATTGGTCTGAATATACTGTAAGTTTTGGTTTAGAAAAAATAAAGGTTTATTTACATTCATTGATATTTGGTTATAGCAGAAAAAAGTTTCTTGACGTGAGCCTTAATATTACTCAGGGTACAATATTCACTATTTTACAAGAATCTTTTAAGGAAGCTGGTGGTATATGTAGAAGGACAAAGGGAGTCCCTAATCAGTTCTTTGAAAGAGAGAGAGAACTCTTAATTTCTTTGCCTGAAAAAGAGCTATTTTTATCATCATTTCTTGAATCAAGAAAGGTAACTTCAGATTGTCTAATAAGCTACAATGGTAACAGATATTCTGTACCGCATTATTTTTCAGGTAAAGATGCTTGGGTTACAACCTATAAAGGAATAAAGCTTTATATATACTCACAGACTAAGAAATTAATAGCTGAGCATACAATACCAAAAAACAAAGGAAATATTGTAATAAACAAGAGCCATTATAAAAACTATAACAACATGGTAGAAGAGAGTTCCTTTGATAGTTTAAGTCACAGGTTTCTGGAGCACTTTTCTATGTTTAATGACAAAGATCTGTTTCTAGATCGCATTAAAAACAAGAAAGGCTTAAATCCAAAATATCATTTAAGACATATTTTATCTCTTTTTGGACACTATGATACCTTATCCTGTATTTCAGTCATGCAGGAATGCATAAAATATGATATCTTTAACTACCATTTTGTTAAAGGTGAACTGCAAAAATATAGTCTTAAAGAAGATTCTTTATCCCTAACAATAAAAACAACTCAAATACCTTCTAAAAATGTAAAAAGGTCACTACAGGAGTATGCTTATGCAAAAGACTAACAATCTTACAGAGGCAATAACGTATTACTGCAAAATATTATCTTTGCCTTTAATAAAGGATATATTCATAAAAGAAGCAGAAGATGCAGCAAAGAGCAAAATAAGCTATCAGCAGTTTTTGTACAACGTATTAAAAATTCAAGCGGATTCAAGGGTAGATAATTCTGTCAAGGCAAAGTTAAAAAAGGCAAAGTTCCCATTTATAAAGACTATAGAAGAGTATGACTTTAGTTTTCAGCCTGAAGTAGATGAAAAACTAATAAGAGAGCTGTGTAATCTAAATTTTATGGATGATGCAAAAAATATCATATTTGTAGGACCTCCAGGAGTAGGTAAAACACACCTTGCAGTAGGGATAGGAGTAAGGGCAGCTCTTCAGAGAAAGAGAGTATTATTCTTTACAGCAGAGGAATTGATGACAGAACTAATAAGAGCTAATATTAGCGCTAAGATAGCTGAGTATGTAGAATTACTGTCAAGAATAGACTTAATAATAATTGATGAGCTTGGCTACCTTGAAGTCAACAAGTCTGCTTCATCTCTGTTTTTTAAACTTGTGTCAAAGAGATATGAAAAGAAATCTATAATATTGACCACTAATAAGCCATTTGAAGAATGGGGTGAAATATTTGGAGATAATGTAGTAGCATCAGCAATATTAGACAGGTTGTTACATCACAGTTATCCCTTTTTGATAACTGGAAAGAGTTATAGAATGAAAGAACTCTTCAAAAAAATAGAAAGGGATAAAAAAGATTAATTTTATGAGCAACAAGGGTGGGTTAAAATTCGTGATAAAAAAGGGTCAGTTTTCATGATAATTAACAGAGGAGTTTGTTTTGATTCACACACTGTATGCACAGGGAGTTTCCATAAGAAAGATTGCCCATATGTTGGGCATTAATAGACGGACTGTCTCAAAGAGATTAAAGGAGAAGGATTTAGAACCCTACAGCAAAAGGACTTATCCTTCAAAACTTGATAAATTCAAAGACTACATAAACAAAAGGATAAGTCAGGCTCATCCAGACAAAATTCCATCTACAGTGCTTTTGAATGAAATTAAGGATATAGGATATGAAGGAAGTCTAAGAATACTTCAGGAATACACAAAATCAGTTTATGACAAACTAAAGCTAAATAAAAAAGAAAATGAGGAAATTATCAGGTTCGAAACAGATAGAGGCTTTCAAGCTCAAGTTGACTGGACAACTGTTAGAAGTGGAAAGAAGCCAATCTATGCTTTTGTTATGGTTTTATCCTATTCAAGAGCAGCTTTTGTTTACTTTACAGACAACATGTGGCAGGACACATTCCAATCCTGCCACATAAAAGCGTTTGACTACTTTGGCGGGATACCAAAGACTATACTCTATGATAACCTAAAATCTGTAGTAATTCAAAGAGATAAATATGGGCAAAATGAACATGGCTTTAACAACAAATTTCTTGATTTTTCCAAAGGTCTATTTATACCAAAACTATGTAAGCCCTACAGAGCTAAAACCAAGGGAAAGGTTGAAAGATTCAATCTATATCTAAAAAATAACTTTTATAAACCATTGAAGGCAAAGCTAAAGAATACGCCAATAGATATAACACCAGATCTCTTAAATGCCTATATATTTTCCTGGCTTACCAGTGCAAATAACAGGATTCATGCAACAACAAACAAAAAACCCTTTGATATGTTAAAAGAGGAACTAAGTTATTTAAGTAAAGTACCAAATAATCTATTTGTAAGTGAAAAAGATAGTAATAAAAATAATATTAAAGATAGTAATAAAAACAGTAAGAAAGAAGTTTACATGGACAAAAGCTTTCATCCTTACTACACAAACCTTTCTGAGTATGAAAAGCTCTTAATAGGAGAAGACAACTATGCTTAATTCAAGGATAGAAGAATACTGCATAAATCTAAAATTAAAGGGCATATTAGAAAACTATAGTTTTCTTGCAGATAAAGCAGCTAAAGAGAGTTTATCCTTTGCTGAATTCCTTTGTCTTCTGCTTGAAGCTGAATATGAAGCAAGAAATCAAAGAGCAAAACAGACTATGCTGAAGTTTGCAGGTTTTCCAAAGATAAAAACTATAGACACCTTTGATTTTTCATCTTCATCAGTTGATAAAACACTGATAAATGAAGTTCTATCAATGAGGTTTATTGATGAGACAAAAAACATTCTCCTTATTGGGCCTCCTGGTGTAGGAAAAACTCATCTTGCTGTAGCTATAGGTTATGCTGCTACACAGAAGAGGATAAAGACAAAGTTCGTAACAATGGCTGATTTGATTATACAAATAGATACTGCACTATCTCAAAATAGACTGGAGCAATACATAAAGAAGTCTATAAATTTTACAGGGCTGCTTATTATTGATGAGTTTGGATACTTTAAGCTCAATGAGAAACAATCAAACCTACTGTTTCAGATAGTTAACAAGAAATATGAGACGGGCTCTATATTAATAACCACAAATCTTTCTTTTATCAGATGGAAAGAGATTTTCAACAATGATGAAGGCTTAACTACAGCTATACTAGATAGACTTATTCATCACAGTTATATCATAAACATCAAGGGAGATAGTTATAGACTAAGACAGAAGAGAAAGGCAGGATTAATTGACTTTAGTTCACAGGAAATTAACAGCTAAAAGTGGTGCAGTTTTGAGCCGCGTAATGGTGCATTTTAGGATTGCACTTGACACATGGTAAAGGATGCTACCACCAATACAGACATAACAAAGCTAAAGGATAACTTTGAAAAGATTATCTTCAGATGGGCAGGAGTTGAGGATATTACGGATAAAGAGCTTGGAGTAAGCTGGGCTATACTAAGCGGTAATGACAAACAAAACAGATTGCTTCACTTTGATAATGGAATAACCCTTAGCTATGAACAGGTTGGAGCAATAGAAAAGTTTTCTGGATATATCCAAGACTTTGAAACAAAGATAAAAACTATTTCGATTACAAGCTTTAACAAGAAATACAGAACAAGATTTATAAATAAAGTAGCATAACATTTAACAAATATCATTAATTAATTAAGATAATTAAAACTGCATTAAAATTAAATTAAAATTTACAAAGGAAGGGTAGGAGAGGGAGTGTTTGAAGACAATAAAGGCAATAAGGATTTAAGTTCTTTAAGAACAGGTCAATTTGAAAAGAATATAGATGAAAGCCTAAAGAGTGTAGTAGAGGATATAGATACAAACGAACCTGTAATGGTCCTAAGATATACATTTTTCAGGACTCTTTCTCTGTTTCTTTTTTTCTTGCTGGGTTTTCTTCTTTTCTTATTTGGAACTTTGATGGGATTTGGAATTATTCCTTTTGATGTTCACATTGATAATAAGTTAAACCGCTTTTTTGGTGTAACTTTCTGTCCTCTTTTTACAATTTTTGCTCTCTGGCTAATGATAGATCTAATAAACACAAAACAAATAGAAGTGTATAGGGATAGAGTTGTTAAGAGAGTAACAATACCATTTCCAATGCAAAGGGATAAGGCAGTGTATTACAAAAGAGCTAAATATGCAATGAACTGGATGGGAATGGTTATTACAGAAGCAAAAAGTATTTTTTTGAGTATAACAATTTTTGCATTTAGTAAAGGTTTCTCTATATATACGACCAGGCTTAAAGGCAAAGATGAGGCTCGCTTTGCTAAGTTCCTGGCTCAGGTTTCTGGAAGAAATGAAGGGGAATTTTTATACAAACCTACATTTACTTGTGATTCCCTCCAAAAACTTATAAAGGAGTGATAAAGGATGTCAGATCAGAAAAAGAATGAGCAAGATCAGAAAAAGAACGACCAGCAAGATCAAAAAAAGAACAGTCAACCAGAGAGCTCTCCTATTGGACCTATGGATATTGTTGAAGGTTATGTGCAGGCTTTTGATTCAGCAGCTAGTAAAGCATTAGAGAATGCTTTTGGAGAAGCAAAGAGGATAATAGATACAAGATTGGTAACTAATGCATTTAAAGGATGTATGATCCCTTTTATAATACTGTTTACATATGAAAAAGTCAGGGAGAACCTGGATGCTGGGATGTCACAGGAAGATGCAATAGGAGAAGCTATGTGTGAGGCGTTAGGAGGTATGGTAGGTGGAACATTAGGAGGAGTGGGAGGTATGGGGGTTGGTTCTGTTGCAGGATCTGTAGCTGGAAGTTATATAGGTTCTCAAATGATTGGTAAAGGGGCATGGTACAAATATAAAGAACTTCTTCAGTTATTAGCAAATCTGTCATTAGCAAACCAAAATACTTCTTCTATCTATCCTAAAACAGTTCAAAGCCTTCTTGGTCAAGGCATCCTTCATACAGATCCATTAGTAATAGACCTTAGTGGAAAAGGAATAAGACTTACAGATGTAAATAGCTCTAAAGCTATGTTTGATCTAACAGGTTCAGGATTTGCAAATAAGGTAGGATGGATAACAAATGATGAAGGCTTTTTAGTCCTGGATAAAAACAACAATGGAAAAGTAGATGACATATCAGAGATGTTTGGTAACAGTTCTACTTCTGGCTTTCAGTCTTTATCTGCTTACGATGCAAATAAAGATGGAAAGATAGACTCATCTGATCCTATCTTTAAAGACTTAAAAGTATGGCAGGATACAAACAACGATGGCATAACTGAACCTGGAGAACTAAAGAGCCTCTCTGAACTTGGAATAAAGTCAATTAGCCTTAACGCACAGAGAACTAATATAACCCAAAATGGAAATCAGATAACACAAATAGCTTCAGTAGAAAAGGAAGATGGCACTACTCTTCAAGCAGCAGACGTAAACCTTACACTGAACAAGCTATATAGCTACTACAACAAAGACGTTCAGCTAAACCCTGATATATTAGGACTTCCCTGGATAAAAGGATATGGCTTTATGCCAGATCTACCCATTGCCATGAGCCTTGATACAACCCTTCTTAACATGGTAAAGGATGCTACCACCAATACAGACATAACAAAGCTAAAGGATAACTTTGAAAAGATTATCTTCAGATGGGCAGGAGTTGAGGATATTACGGATAAAGAGCTTGGAGTAAGCTGGGCTATACTAAGCGGTAATGACAAACAAAACAGATTGCTTCACTTTGATAATGGAATAACCCTTAGCTATGAACAGGTTGGAGCAATAGAAAAGTTTTCTGGATATACCTCTAATGAAGTACAGGATGGAATAAGACATGCATCTGGTCAAGACCTGTTAAGTGCATGGGATACAATGTTTCAAAACTTATTTACAAGGTTTATGGTTGATTCTGGCAAGCTAAGCAATATTTTGCCAGCTTACTATGACTTCTTTACAGACACAATTGTATTAGATAAAAGCTTTAACGAACAAGACTTTGAAGCTAAGATAAAAACTATGCTCTTATCAAATGATACAAATACTTCAAGTCTTGCAATTCTTTCTTTGTGTGCATTAGGTGATACTGGAGCAACAAGTTCACAAAGTGTAGCAAGGGTAATAATGGATACACTAATAAATCCTGATAACTCATCTTCAATTACAAACCTTGTAAATAATCCCTTTTTTGAATTTTTATGTCCTGCTGTAGGTTCTTTAAGAGCAAGTATAGTTGCAGATGCCTTAGCAAATTCTGACAACATATCTTCAATCACAAACCTTGTAAACAATCCAACCTTTCAATTCCTGTTTGGTCAGACTGACGTATTTACAGGCACTTCAGGAAACGATTGGATATCAGTCGGATGGTGGAATTCAAACAGCAATACCCATATCCTCTCAGGAGGCCTAGGGAATGATACCTTAGACTCCGACACCAGTGGCTACAATATCTTCTTAGGCGGTCCGGGGGATGATAACTTATATGCCATATATGCCAGTAACAACGGCAACAATATCTTCTTAGGCGGTCCAGGAAACGACAAAGATTGGGGTGGTAGTGGTAACAATTTCTACATTTTTGAAAGGGGCGGCGGACTTGACACTGTATGTCCAAACGGAAGTTTAAACACTGTTGTATTTTCCAAGAACATCTCTCAAAATGACCTAATCCTTGCTAAGGACGGCCCCGACCTTATATTATCCCTTAAAAACAATTCCAGCGACTTTATGAGACTTAAGAACTTCTTTGGTCAACAAACTTATCAATTTCAATTTGCGGATAAGACAATTGGATACAACGACATTACAAAGTTGTGGTCAGACAATTTAAGCGACACTTTATCAGCCCATTACGACATCTCTACTGGCAAGATCGTCCTTGATCAGGGTTTTAATGAAGCAAGCTTTGAAACAAAGATAGCAGGCGATCTTTTATCAAGCGATGCAAATACTTCAACTCTTGCAATGCTTACCTTGCTCAACCTGAAAGAGGCAACTGGGAAGGGTCTAACAGAGATAGCCTCTACAGAAGCAGATGCCTTAGCAAATTCTGACAACATATCTTCAATCACAAACCTTGTAAACAATCCAACCTTTAAGTTTTTATTCAGTGAAGGTAGTGCGTTTCCAGGTTATTCTGGCACAAAAGAGTCTTGGTTTTTCTCGTTTTATAGTGTAATTGACGAGAGCAATCCGTACTACAGTGGTAGGGGTAATATAGCTATAGGAGATCCAAGTGTTTTTGCTTACTCTTACCACCTTGGTAACAGTATATCTCTACCTAGTTATTTTAATGATGAAGATTGTTATGGTTGTGGTGCGTTCAATTTTTACATTTTTGAAACGGGTGGCGGACTTGAAACTGTGCACCTATCATACGGAGGTTTAAACACTATTGTATTTAACAAAGAGGTCTCTCAAAATGACCTAATCCTTACTAAGGACGGCCCCGACCTAATTGTTACTTTTAAAAATAACGCTAGCGATTCTATGAAAATTGTCAACTTCTTTAGTATGATAGGAAGAAGTTGCCAATTTCAATTTGCGGATAAAATAATTGGATACAACGATATTGCAAAGTTGTGGTCAGATAATTTAAGCAACATTTTACCATCTCATTACGACATCTCTACTGGCAAGATCGTCCTTGATCAGGGCTTTAACGAAGCAAGCTTTGAAACAAAGATAGCAGGTATGCATTTATCAGATAACGCCTACGCTTCAAGCCTTGCGTGGAATACTGATTTTTATTTAAGTGAAAATAGTGATAATAAGATAGTATTAGGTAGCCCTAATAATGATTATTTAACCGGTGGAAATTCCAACGATTTGTTAATAGGTGGACCTGGCAATGATTATATTAGGGATTACAATGGCGATGATACTTTAATTTTCAATAAAGGAGATGGTCAGGATACATGGGATTTATTCCCTCACTCTGGATCAGTTACTATAAAGTTTGGTGAGGGCATAAGTAAAGACGATCTAGGCTATGAAGAAGTTCCAAATGGCCTTCTTGTTAAAATAGCTAATTCGACAGATAGCATATTATTAGATCCAGTTATGGTTTGCGCAGCTATAGCTAACTTTAGCTACAAATGGACTGGGGATATTTTAACAGACGACATAACTATGGAATTCTCTGACGGATCAAAACTCACATCAGAAGATCTTTTAAGTAAATTTGGAATTAATGGGACTTCTGGAGATGACGTTCTTTATGGTACAGGCAACGATATTCTTATTGGGGGGAAAGGAAACGATACGATTTATAGCACAGGGCTAAACAATGTCTTTGTGTTTAATCCCGGAGATGGAAAAGATGCTGTAATTGATGAAGGTAATTTGAGCACATTTTTCTTTAACACAGATGAAAAAAATATTGCTATCTTTAAGCAGGACGATTCGCTTGTCGTAGGGTATTCTACAAATGATTTTGTAACTGTAAAAAATGAATTAAGTGAAAATAACTCTATAAATGAAAAAGACTTGAAAATTAAAGCAAAAGATGGCAATTGTATTACAGGTGATATCATTGAGAACATTGCAAATGCTTTGATTGATTTTAATGCAGATAAAGGAGTGGATTATGCTCAGAAATACAATGAATTAATTAATAATCAACAATATATGACTTTACTTAGCCAGAGTTGGGCACACGAGCAGACTCACTATAGTGCTATAGTTGGTTAA

Protein sequences of DBSCAN-SWA_1

>NC_015499|73838:84391|79036_79351_+|WP_041437874.1|DBSCAN-SWA
MVKDATTNTDITKLKDNFEKIIFRWAGVEDITDKELGVSWAILSGNDKQNRLLHFDNGITLSYEQVGAIEKFSGYIQDFETKIKTISITSFNKKYRTRFINKVA
>NC_015499|73838:84391|77163_78213_+|WP_013755462.1|transposase|DBSCAN-SWA
MIHTLYAQGVSIRKIAHMLGINRRTVSKRLKEKDLEPYSKRTYPSKLDKFKDYINKRISQAHPDKIPSTVLLNEIKDIGYEGSLRILQEYTKSVYDKLKLNKKENEEIIRFETDRGFQAQVDWTTVRSGKKPIYAFVMVLSYSRAAFVYFTDNMWQDTFQSCHIKAFDYFGGIPKTILYDNLKSVVIQRDKYGQNEHGFNNKFLDFSKGLFIPKLCKPYRAKTKGKVERFNLYLKNNFYKPLKAKLKNTPIDITPDLLNAYIFSWLTSANNRIHATTNKKPFDMLKEELSYLSKVPNNLFVSEKDSNKNNIKDSNKNSKKEVYMDKSFHPYYTNLSEYEKLLIGEDNYA
>NC_015499|73838:84391|76310_77084_+|WP_013755461.1|DBSCAN-SWA
MQKTNNLTEAITYYCKILSLPLIKDIFIKEAEDAAKSKISYQQFLYNVLKIQADSRVDNSVKAKLKKAKFPFIKTIEEYDFSFQPEVDEKLIRELCNLNFMDDAKNIIFVGPPGVGKTHLAVGIGVRAALQRKRVLFFTAEELMTELIRANISAKIAEYVELLSRIDLIIIDELGYLEVNKSASSLFFKLVSKRYEKKSIILTTNKPFEEWGEIFGDNVVASAILDRLLHHSYPFLITGKSYRMKELFKKIERDKKD
>NC_015499|73838:84391|79438_80098_+|WP_013755464.1|DBSCAN-SWA
MFEDNKGNKDLSSLRTGQFEKNIDESLKSVVEDIDTNEPVMVLRYTFFRTLSLFLFFLLGFLLFLFGTLMGFGIIPFDVHIDNKLNRFFGVTFCPLFTIFALWLMIDLINTKQIEVYRDRVVKRVTIPFPMQRDKAVYYKRAKYAMNWMGMVITEAKSIFLSITIFAFSKGFSIYTTRLKGKDEARFAKFLAQVSGRNEGEFLYKPTFTCDSLQKLIKE
>NC_015499|73838:84391|80104_84391_+|WP_013755465.1|DBSCAN-SWA
MSDQKKNEQDQKKNDQQDQKKNSQPESSPIGPMDIVEGYVQAFDSAASKALENAFGEAKRIIDTRLVTNAFKGCMIPFIILFTYEKVRENLDAGMSQEDAIGEAMCEALGGMVGGTLGGVGGMGVGSVAGSVAGSYIGSQMIGKGAWYKYKELLQLLANLSLANQNTSSIYPKTVQSLLGQGILHTDPLVIDLSGKGIRLTDVNSSKAMFDLTGSGFANKVGWITNDEGFLVLDKNNNGKVDDISEMFGNSSTSGFQSLSAYDANKDGKIDSSDPIFKDLKVWQDTNNDGITEPGELKSLSELGIKSISLNAQRTNITQNGNQITQIASVEKEDGTTLQAADVNLTLNKLYSYYNKDVQLNPDILGLPWIKGYGFMPDLPIAMSLDTTLLNMVKDATTNTDITKLKDNFEKIIFRWAGVEDITDKELGVSWAILSGNDKQNRLLHFDNGITLSYEQVGAIEKFSGYTSNEVQDGIRHASGQDLLSAWDTMFQNLFTRFMVDSGKLSNILPAYYDFFTDTIVLDKSFNEQDFEAKIKTMLLSNDTNTSSLAILSLCALGDTGATSSQSVARVIMDTLINPDNSSSITNLVNNPFFEFLCPAVGSLRASIVADALANSDNISSITNLVNNPTFQFLFGQTDVFTGTSGNDWISVGWWNSNSNTHILSGGLGNDTLDSDTSGYNIFLGGPGDDNLYAIYASNNGNNIFLGGPGNDKDWGGSGNNFYIFERGGGLDTVCPNGSLNTVVFSKNISQNDLILAKDGPDLILSLKNNSSDFMRLKNFFGQQTYQFQFADKTIGYNDITKLWSDNLSDTLSAHYDISTGKIVLDQGFNEASFETKIAGDLLSSDANTSTLAMLTLLNLKEATGKGLTEIASTEADALANSDNISSITNLVNNPTFKFLFSEGSAFPGYSGTKESWFFSFYSVIDESNPYYSGRGNIAIGDPSVFAYSYHLGNSISLPSYFNDEDCYGCGAFNFYIFETGGGLETVHLSYGGLNTIVFNKEVSQNDLILTKDGPDLIVTFKNNASDSMKIVNFFSMIGRSCQFQFADKIIGYNDIAKLWSDNLSNILPSHYDISTGKIVLDQGFNEASFETKIAGMHLSDNAYASSLAWNTDFYLSENSDNKIVLGSPNNDYLTGGNSNDLLIGGPGNDYIRDYNGDDTLIFNKGDGQDTWDLFPHSGSVTIKFGEGISKDDLGYEEVPNGLLVKIANSTDSILLDPVMVCAAIANFSYKWTGDILTDDITMEFSDGSKLTSEDLLSKFGINGTSGDDVLYGTGNDILIGGKGNDTIYSTGLNNVFVFNPGDGKDAVIDEGNLSTFFFNTDEKNIAIFKQDDSLVVGYSTNDFVTVKNELSENNSINEKDLKIKAKDGNCITGDIIENIANALIDFNADKGVDYAQKYNELINNQQYMTLLSQSWAHEQTHYSAIVG
>NC_015499|73838:84391|73838_74957_+|WP_013755459.1|DBSCAN-SWA
MGLLALLWLYKISKTGSYTLLKNALKEAGMESTGIIDTRVLTNLLKGEFLLDDGALTAGKSANRISDGMDPNSAIGKSTAELLGAIIGGMLGGPIGSLILSEAFSQLGGFLWDRFEDGSILKILDEWALANQNPGYAYPKTVQSLLGQGILHTDPLVIDLSGKGIRLTDINSSKAMFDLTGSGFANKVGWITNDEGFLVLDKNNNGKVDDISEMFGNSSTSGFQSLSAYDANKDGKIDSSNPIFKDLKVWQDTNNDGITEPGELKSLSELGIKSISLNAQRTNITQNGNQITQIASVEKEDGTTLQAADVNLTLNKLYSYYNKDVQLNPDILGLPWIKGYGFMPDLPIAMSLDTTLLNMVSSAVLNCTTNAQ
>NC_015499|73838:84391|75112_76324_+|WP_041437873.1|transposase|DBSCAN-SWA
MEDWVTIINLKKRNPSMGTRKIAKILGVSRNTVKRALKSETYPSYERGKMVYKELEPFHEFIKEAFIFKRQRVSVIISNLKSKGYNGSSIAVYRYINEHFKELKKDISTKTYEPYETSPGEQMQYDWSEYTVSFGLEKIKVYLHSLIFGYSRKKFLDVSLNITQGTIFTILQESFKEAGGICRRTKGVPNQFFERERELLISLPEKELFLSSFLESRKVTSDCLISYNGNRYSVPHYFSGKDAWVTTYKGIKLYIYSQTKKLIAEHTIPKNKGNIVINKSHYKNYNNMVEESSFDSLSHRFLEHFSMFNDKDLFLDRIKNKKGLNPKYHLRHILSLFGHYDTLSCISVMQECIKYDIFNYHFVKGELQKYSLKEDSLSLTIKTTQIPSKNVKRSLQEYAYAKD
>NC_015499|73838:84391|78205_78982_+|WP_013755463.1|DBSCAN-SWA
MLNSRIEEYCINLKLKGILENYSFLADKAAKESLSFAEFLCLLLEAEYEARNQRAKQTMLKFAGFPKIKTIDTFDFSSSSVDKTLINEVLSMRFIDETKNILLIGPPGVGKTHLAVAIGYAATQKRIKTKFVTMADLIIQIDTALSQNRLEQYIKKSINFTGLLIIDEFGYFKLNEKQSNLLFQIVNKKYETGSILITTNLSFIRWKEIFNNDEGLTTAILDRLIHHSYIINIKGDSYRLRQKRKAGLIDFSSQEINS

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013755459.1|73838_74957_+	hypothetical protein	A0A2H4JEI4	uncultured_Caudovirales_phage	5.8e-23	40.4
WP_041437873.1|75112_76324_+|transposase	transposase	A0A059NT83	Lactococcus_phage	3.5e-05	31.7
WP_013755461.1|76310_77084_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	1.4e-55	47.4
WP_013755462.1|77163_78213_+|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	4.9e-64	44.1
WP_013755463.1|78205_78982_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	7.8e-51	39.1
WP_041437874.1|79036_79351_+	hypothetical protein	NA	NA	NA	NA
WP_013755464.1|79438_80098_+	hypothetical protein	NA	NA	NA	NA
WP_013755465.1|80104_84391_+	calcium-binding protein	A0A2H4JEI4	uncultured_Caudovirales_phage	1.0e-22	40.4

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NC_015499|761372:770510|DBSCAN-SWA
AATGTCAGAGAAGATTGTCGGTATCGACTTAGGTACAACTAATTCTGTCATTGCTGTAGTTGAGAGCGGAGAACCAGTAGTCATTCCTAATAGTGAGGGCAGTAGGCTTACTCCTTCTGTAGTTGGCTTTACGAAGAATGGAGATAGATTAGTAGGCCAACTTGCAAGGAGACAAGCCGTACTTAATTCTGATAATACTGTTTATTCGGCCAAGAGATTTATTGGCCATCGTTTTTCGGAGGTTGCTGCTGAAAGAAAAAGAGTGGCTTATGAAGTCGTGCAGGGGCCGAATGATTCAGTAAGATTTAGAATTCCTGCCATAAACAAAGAGCTTTCGCCAGAAGAAATCTCTTCTATGGTTTTGATGAAATTAAAAACAGATGCTGAGGCTTATCTGGGTACAAAGATTACAAAAGCAGTAATTACTGTGCCTGCTTATTTTAACGATTCACAAAGGCAGGCTACAAAGGATGCTGGTAAGATTGCTGGTTTAGATGTGGTAAGAATTATTAACGAGCCTACCGCTGCAGCTCTTGCATATGGTTTGGATAAAAAGAAAAACGAGACTGTTCTCGTTTGGGACTTAGGCGGTGGAACGTTTGACGTGTCAATATTAGAGGTTGGAGATGGAGTATTTGAAGTAAAATCCACATCAGGTGATACGCACCTTGGCGGAGATGATTACGACCTTGCACTTGCAAACTACTTGGCAGATGAATTTAGAAAGGATCAGGGAATAGATCTAAAAGCCGATAAACAAGCTTGGCAAAGACTTCTTGAGGCAGCAGAAAAGGCGAAGATTGAACTGTCTTCAATGACCTCTACGAATATAAGTTTACCATTTATTACTGCAGATCAGACAGGGCCAAAACACCTTGAAATGAGCATTACTAGGGCAAAGTTTGAAGATATCACAAGACATCTCACAGAGAGATGTATCGCGCCTTTCAAGCAAGCTCTTGATGACGCAAAACTAAAGATTGAGGATATAGACGAGATCATTCTTGTTGGTGGTTCTACAAGGATGCCTGCAGTTCAAGAGCTGGTTAAGAGATTAACTGGAAAAGAGCCTAACAAGGGTGTAAATCCAGATGAAGTTGTAGCTGTTGGCGCTGCTATTCAGGGTGCTGTTCTTGCAGGGGAAGTAAAGGATATAGTCTTGTTAGATGTTACTCCTCTTTCTCTTGGAATTGAGACACTTGGTGGAGTGTTTACAAAGATGATCGAAAGAAATACCACTATTCCTACCAAGAAGAGTGAAATATTTACTACTGCTGAAGATAACCAACCTGCAGTGGAAATTCACGTTTTGCAGGGAGAAAGGGCAATGGCAAGAGACAACAGGACTCTTGCAAGATTTAGATTAGAAGGTCTGCCCCCTGCTCCAAGAGGCGTTCCTCAGATTGAGGTTACTTTTGACATAGATGCAAATGGTATATTAACGGTTCATGCAAAGGATCTTGGAACGGGTAAGGAACAAAAGGTTACTGTAACAGGTGCTTCTACTCTGTCCAAAGAAGAAATAGATGAAATGATTAAAAAGGCTGAACAATTTGCTGAGGAAGATAGAAGAATTAAAGAAGAAGCGGATACAAGGAACCAGGCTGAGAGTTTTGCTTATAGCTTAGAAAAAACTTTGAGGGATATTGGTGACAAAATCTCTCAAGATGAGAAGTCAAAGATAGAGAATGGAATTTCTGAGTTAAGAGATTTGATTAAGAAAAATGCAAGCAAGTCTGAAATTGAAGCTAAGATGAATGAACTAAAGCAACTAAGTTATAAGCTTAGTGAAGAAATATATAAGAGCAGTTCTTCAGGAGCTTCTTCTGGATCGACGACCACCGGTTCTTCTGGCCAAGGTCCACAAGAAGGAGAAGTGATAGATGCTGATTTCAAAAAGGAAAATTAAAGAAGTACATTAGTTATTAGCTTTTACAAGTTTTAAAAAATTATTTGCAAATAAGGTACCGAGTGGCAGGTATAGGCATATCAATAATGCTATATATGTCACTCGTTACCAAAATTATATTATTTTAAAAATCTTTTTAGGTATGTGTTTTTCTACAACTAAAATTAATTCGACATATTAAAGGAGGTAAAATATGTCTGAAATAAAGATAGAAAACAATAACGGTGAAAATAAAGAGAATAAAGAGGGTGAAGAAGTAAAGGATTACGTTGAAACCCCAGTTGAGGATAAAGATGCTCTCATTGAAAAACTTCAACAAGAAATAAATGATTTACAAAATAAATATCTAAGAAGCCTGGCTGACTATGATAACTTAAGGAAAAGAACCCAAAGAGAAATAGAGTTTAGAACTAGCGAAATAAGAAGAAATTTTTTGGCAAAGATATTGCCAAACATTGATCAACTTGAAAGGGCTCTCTCTTATTCTGATTCCGAAAATTTTAAAAAAGGAATAGAGATGGTTTATAAGAATCTGTTTGAAGCTCTTAAATCAGAAAATATATCAAAAATTGATGCTGAGCCTGGAACTATTTTCAACCCTCTATATCATGAAGTTGTATTTGCAGAGGAATCAGATAAGCCTGAGGGAACCATACTCCAGGAGCTAAGTGCTGGATATATATATAACAATGAAGTATTAATTCCATCAAAAGTTAAAGTGAGTCGGCCGCCCAAAAAGGAAGGCGAAACTCTAGATGAAGTATAAAGATTATTATAAAATTCTTGGTGTTGATAGAAACGCTACTGAAAAAGAAATAAAACAGGCATATAAGAAATTGGCCAGAAAATACCATCCTGATTTACCGGGCGGCGATGCAGAAAAGTTTAAAGAAATAAACGAAGCCCATGAAGTTCTATCAAATCCTGAAAAAAGAAAGATATATGACCAGATGGGTTCTTCATGGACAGGTCAGGGAGTAGGTAGTCAGAACTTTAATTTCAATGGCAATTTTTATACACAGTATAATATAAATCCTGGCGAATTTGATAACATATTTGATCTCATTAATAGTATTTTTGGCTCTTCCAGTAAAAGAGGTTTTTCTAGTAGAGGATTTTCGCCATTTGATTTTTTTGGAAAACAACAAAATGTTAGAACGGATATTGGTCAGGATGTAGAATCTGAGGTTACAATATCGTTGAGCGAATATTTACATGGTACTACAAAAAAGGTCAATTTACCCTATCTTAATAAGGATGTGGAATTAAAGATTCCTGCTGGAGTTAAAGAAGGTTCAAAGATTAGGTTTAAAGGTTTAGGCCAAAATGGTGGTGATCTATATTTAAAAATAAAGATCGAGAAGGATCCTAGGTTTTCTATTGATGGTGACAATATTAAGACTACAGCTAATATTTCTTTATTTACAGCTCTTCTTGGTGGAGAAATCCCAATAGACACTCCTGAGGGAAGAGTTAAGGTGAAAGTTCCTGCTGGTTCTTCATCCGGAACGATTCTTAGATTAAAGGGACTTGGTGCTCTTAAACATAACAAAACAAGAGGAGATTTGCTTGTAAATATAAATGTTCAAGTTCCAAAAAATCTTTCAAACGAAGAAAAAGAAATTGTTACAAAATGGGCTAAATTAAGGGGTGAAAAATAATGCCAGAAACAAGTGGCTTCTATGCTATAAGCATTGTTTCAAAAATGTTATCAATTCACCCACAGACAATAAGAAGATACGAAGAGTTAGGTTTAATTTGTCCAAAGAAACTTGCTGGTAAAACAAGAGTTTTTAGTGATGAGGATATAGAAATACTAAAAAAGATTCAAGAGTTTACAAAAGATCTTGGAATAAATATTGCAGGCGTTGAAGTTATTTTAAGATTGTCAAAGAGAGTAGAAGAGTTAGAATCAGAAGTCTCAAGGCTCAATAATTTGCTAAAAAGTATTTCTCAAGAGAAAGAAGGTGAAAATAATGAATCCAGATAAATTTACAGAACAGTTAAGAGACTCTTTGGAGTCTTCACAAAGAGTCTTAATGAAGTTCCAAAATAGCCAACTTGATGTAGAACATCTTTTATATGCGATGCTTACTCAACAAGATGGTCTTGTAGGGAAGGTTTTGACTAGAGCTGGAATTAATAAAAATGATATTAAAAATAGACTTGAATCTATTTTGAATAGGTTACCAAAGATACAATATTCATCTTCTACTCCCCAAATTTATATTACTCCATCTTTGAAGAAGGTTTTAGATATAGCTGAAGAAGAGGCGATCAGATTAAAAGACGAATTTGTTGGAGTAGATCACGTTTTGATTGCAATAGTAAAAGAAGGCGAGAGTCCAGCGTCACGCCTTTTAAACGAGTATGGTATCACAGAAGAAAAGGTTTATCAAATTCTTAAAGATATAAGAGGTACACAAAGAGTGACAGATCCAGGTGCAGAAGAAAAATATCAAGCTCTTGAAAAGTATACAAGAAATTTAACTCAACTTGCATTAGAGGGCAAGTTAGATCCTGTAATCGGTAGAGATGAAGAAATTGAGAGAGTTATGCAGATTCTTTCTAGAAGAACGAAAAACAACCCGGTTTTAATTGGTGAGCCCGGTGTTGGAAAAACGGCTATTGTTGATGGAATTGCACAAAAGATAGCTTCCAACGATGTGCCTGAGATATTAAAGGGAAAACAACTTTTAGCTCTCGACATGGGCGCCTTGATAGCTGGTACTAAATTTAGAGGTGAATTTGAGGAAAGGTTAAAAACAATCATTGATTCTGTAACTAAAACTCAAAATTATATTTTGTTCATTGATGAATTACATACTGTAGTTGGAGCAGGCGCTGCAGAAGGTGCCATTGATGCATCAAATTTACTTAAACCTGCTCTTGCAAGAGGTGAATTAAGGGTAATAGGTGCCACTACTCTTGATGAATATAAAAAATATATAGAAAAAGATCCTGCCCTTGAAAGAAGATTTCAACCTGTTTTTGTAAAAGAACCAAGCGTAGATGATACTATTTCTATTTTAAAAGGTTTAAGAGATAAATATGAGGCGCATCATAGGGTAAAAATTACAGATGAGGCAATTGAATCGGCTGCACATCTTTCCGAAAGATACATATCTGATAGATTTTTGCCAGACAAGGCTATTGATTTGATTGATGAAGCTGCTGCTAAAGTAAGAATTCAACTTTCTAATATGCCTACAGAACTTAAGGAAATGGAAAATAAGTTATCAAGGTTATATCAAGAGGGACAAGAAGCTGTAAAAAGAGAGGACTACGAATTAGCAGCAAAGCTAAAGAGCGAATCTGAAGCTCTTTCTAAAGAATTTAAAGAGAAAAGGGATAAATGGCTAATTGACAAGAAAGTTAACGAAGTAGTAGACAAAGAAGACATTGCAAATTTGGTTTCTAAATGGACAGGTATACCGGTTACAGAGCTTGTTCAAGAAGAAGTCGACAAATTAACTAATATGGAGAGCATTTTACATAAAAGAATTATTGGCCAAGATGAGGCTGTAGTTGCTGTTTCCGAGGCAATAAGGAGGTCAAGGTCAGGCCTGAAGGATCCGAGAAGGCCAGTAGGATCATTTCTCTTCCTTGGTCCAACTGGTGTGGGCAAAACTGAGTTAAGCAAAGCCCTTGCTGCATTTTTATTCAAGGATGAAAATGCTTTAGTTAGAATTGATATGTCAGAATATATGGAGAAGCACTCAGTTTCGAGGTTGGTAGGAGCTCCTCCTGGTTATGTAGGTTATGAAGAGGGTGGCCAATTAACAGAAGTTATCAGAAGAAGACCTTATTCTGTTATACTCTTAGACGAGATAGAAAAGGCTCATCCTGACGTTTTTAATATACTCTTACAGGTTCTTGACGATGGAAGATTGACAGATGGTAAGGGTAGGACTATAGATTTTAGAAATACTGTTATAATAATGACATCTAATCTTGGTTCTGATATACTATTAAATTCCAATGTTGAAGATGAAAGGGAATTTGAAAAGGCAAAGAACAGAGTTTTATCGCTATTAAATTCTACATTTAGACCAGAATTTTTAAATAGAATAGATGAAATTGTGGTTTTTAAACCTCTTTCTAGATCTGATATTGAAAAAATTGTTGAATTGATATTAAATGATATTCAAGAAAGATTGAATGAAAAGAAAATAAAACTAATACTTACCGAGGAAGCAAAGAAGTTTTTTGCGAAAGAGGGATATGAACCTACGATGGGAGCTAGACCTCTTAAAAGATATATACAGAAAAATTTGGAAAATCTTATTGCAAAGGAGCTTTTGAACAATAAAATTAAGGAAGGAGATACTGTGAAAATAGTGGTAGATAACAATAAGATTGGGTTGGTAGTTGAATAGTGAATTTTTTTGACATAATTTGGTTTATTTTTATAATATTTGCTTTTACTCCTGTTTTGCAACAAAAATACCTGGAAAACATGAGAATTAGAACTATAAGGTCTTTGGAGAAAAAGATGGGTTCCAGAGTCATTACACTCATACACAGACAGGAGACTATATCCTTTTTTGGCATTCCTCTTTCCAGATATATTGATATAGATGATTCTGAACAAATTTTAAGGGCAATAAGGCTTACCGAAAAAGATATGCCTATTGACATTATACTTCATACACCAGGAGGATTGGTATTGGCAGCAGAGCAAATAGCAAAGGCTTTAATAAGACATCCGGCACCTGTGAGGGTGTTTATTCCTCATTATGCTATGTCTGGTGGCACTATGCTTGCTCTTGCTGCCGATGAAATATATCTTGATGAAAATGCAGTTCTTGGCCCCGTAGATCCTCAGCTAGGTGAGTATCCAGCTGTTTCTATTTTACAAGCCGTTAGAGAGAAGGGTATAGGAAATGTTGATGACAGAACGCTAATTTTAGCGGATATGTCACAAAAGGCTATTAATCAGGTGAAGAGTACTATTAAACGACTCCTACAGGATAGAATGGATTCAGAAAAGGCGTCATTTCTTGCTGAACTTTTTACAAGTGGGAAGTGGACGCACGATTATCCAATTTCCTATGAGGAAATTAAAAATTTGGGCATTTCGGTGAGAAAAGATTTGCCGGAAGAGGTGTATGAGCTAATGGAGTTATATCCTCAAGCGGGAAATAGAAGGCCTTCGGTACAATTTATTCCTATTCCTTATAAGCTTCCTGCGAAAGGTAATAAATAGTGTTCAAAAAGAATGAGGAAAGAAAAGGTTTACTATTTGTGGTTTCTGGTCCTTCTGGTGTAGGGAAGGGCACGGTAATTAAGGAATTGATGCAAAGGGATCCACTGCTTTGTCTTTCTATTTCTATGACCAGTAGATCTAGAAGACCTAACGAAGTTGATGGTAAAGATTACTTTTTTGTTTCTGAGTCAGAGTTTTTAGAACACATAGAAAAGGATAACCTTTTGGAATGGGCTAAGGTTCATGGTAATTATTATGGAACTCCAAAGGATTATGTTTTAAAAAAATTAAGTGAAAACAATGATGTTATTCTTGAAATAGATACCAGAGGTGCAAGTAAAATAAAGTCGTTGTACCCCGATGCAATTTTGATTTTTATTGTGCCTCCCAGATGGTGCGATCTTAGATTAAGATTGGAAACTAGGTCTTCTGAGAATTTTGATGAAATAAAAAGAAGACTTTCAAGATCGATTGAAGAGATAGAAGAATACTTTATATATGATTACATAATTGTGAATAATAGCGTTATAGAAGCAGCTAGCGAACTTGAATGTATAATTGTCGCTCAAAGAGCGAGAAGAGAAAGAAGAGAAGACATAATTTCAAAACTTAGATCAGAAATACAATTTGGACAGGAGGTAATTTAATTGTGATAGCGCCGAGCCTGGAAAATGCTTTGAAAATGATACCATCAAGATATGCTCTAGTTATTGTAGCTGTAAAAAGGGCAAAAGAGATAAAGAGCAACAAAGACATTTTTGCAACTAATGTTAGCGATCCTCTCGAACAAGCATTTGAAGAAATTGCAAGTGGAAAAATAAAGTTCACTATAAGTAAATAAATTGAAAATACTTTTTGGTATTTGTGGTGGCATCTCTGCGTATAAAGCTGCAAGTTTCGTTTCTTCTTTAGTAAAGGAGGGAAACGAGGTAAATGTCGTGATGACACAGAATGCTACTAGATTTGTTTCCCCTTTAACGTTTGAGGCTCTAACAAAAAATGTTTGTTACAGCGATTCTAATTTGCCTTCGGGGAAAGATGCAGTAGCTCACATAACTTTACCTCAAAGTTCTGATGTTTTTGTTATATGTCCAGCTACGGCTAATACAATTTCAAAGATTGCATTGGGTATAGCTGATAACCTCCTTACCACAATGGCTATTGCAAGAAAGTGTCCACTAGTATTGGTTCCTGCAATGAACGATGTTATGTGGTCCAATCCTTCTTTGCAGGATAATGTAAAGAGATTATTGGCTCAAGATGTTATATTTTTTGGACCTACCTATGGTAGGCTTGCTTGCGAAAGCGTGGGGTCGGGTAGAATGTTAGAGGTATCTGAACTCTTAGAGATGTTTAACTATCATTTTTATCCAAAAAAGGATTTTGTTGGAAAAAGGATATTAATAACTGCAGGTCCTACTCGTGAACCTATAGATCCTGTTAGATATATTTCCAATAGGTCCTCAGGTAAGATGGGTTTTGCTTTTGCCCAAATCGCTTCTTTGAGAGGGGCCCAAGTAAAGCTTATTTCGGGACCTACCAGTTTAAGTACTCCTTATATGGTAGAAAGAATAGATATTGAAACTACAGAAGAGATGCTAAAGAGCGTTCTTGATAATTTTGAGTTTTGTGATGTGCTGGTTATGGCAGCTGCTGTTTCAGATTTTAAAGTTGATCAACAATCTTCAAAAAAGATAAAAAAGAAAAATAGCTTAGAGCTTAACCTTATAGCAAATCCTGATATACTTAAGGAAATTAGTTCATTAAAAAAAAACCAAGTAGTTATTGGATTTGCTGCTGAAACTGAAAATTTGAGCGAAAATGCAAGCAAAAAGCTAGTTGAAAAAAAATTAGATTATATAGTAGCTAATAGAATTAGCGAAACTGGATTCCCTTTTGGAAGTGAAAACAATGAGGTTTTAATCTTATCTGCAAGCGGCGAGTGCTACGAACTTAACTCAACAAAGATAGATATTGCAAGCTTCATTCTGGACATTATTAAGGAAAGAATCTCGTTCTAG

Protein sequences of DBSCAN-SWA_2

>NC_015499|761372:770510|765256_767659_+|WP_013756143.1|DBSCAN-SWA
MNPDKFTEQLRDSLESSQRVLMKFQNSQLDVEHLLYAMLTQQDGLVGKVLTRAGINKNDIKNRLESILNRLPKIQYSSSTPQIYITPSLKKVLDIAEEEAIRLKDEFVGVDHVLIAIVKEGESPASRLLNEYGITEEKVYQILKDIRGTQRVTDPGAEEKYQALEKYTRNLTQLALEGKLDPVIGRDEEIERVMQILSRRTKNNPVLIGEPGVGKTAIVDGIAQKIASNDVPEILKGKQLLALDMGALIAGTKFRGEFEERLKTIIDSVTKTQNYILFIDELHTVVGAGAAEGAIDASNLLKPALARGELRVIGATTLDEYKKYIEKDPALERRFQPVFVKEPSVDDTISILKGLRDKYEAHHRVKITDEAIESAAHLSERYISDRFLPDKAIDLIDEAAAKVRIQLSNMPTELKEMENKLSRLYQEGQEAVKREDYELAAKLKSESEALSKEFKEKRDKWLIDKKVNEVVDKEDIANLVSKWTGIPVTELVQEEVDKLTNMESILHKRIIGQDEAVVAVSEAIRRSRSGLKDPRRPVGSFLFLGPTGVGKTELSKALAAFLFKDENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVIRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGKGRTIDFRNTVIIMTSNLGSDILLNSNVEDEREFEKAKNRVLSLLNSTFRPEFLNRIDEIVVFKPLSRSDIEKIVELILNDIQERLNEKKIKLILTEEAKKFFAKEGYEPTMGARPLKRYIQKNLENLIAKELLNNKIKEGDTVKIVVDNNKIGLVVE
>NC_015499|761372:770510|769138_769330_+|WP_013756146.1|DBSCAN-SWA
MIAPSLENALKMIPSRYALVIVAVKRAKEIKSNKDIFATNVSDPLEQAFEEIASGKIKFTISK
>NC_015499|761372:770510|763473_764046_+|WP_013756140.1|DBSCAN-SWA
MSEIKIENNNGENKENKEGEEVKDYVETPVEDKDALIEKLQQEINDLQNKYLRSLADYDNLRKRTQREIEFRTSEIRRNFLAKILPNIDQLERALSYSDSENFKKGIEMVYKNLFEALKSENISKIDAEPGTIFNPLYHEVVFAEESDKPEGTILQELSAGYIYNNEVLIPSKVKVSRPPKKEGETLDEV
>NC_015499|761372:770510|761372_763280_+|WP_013756139.1|DBSCAN-SWA
MSEKIVGIDLGTTNSVIAVVESGEPVVIPNSEGSRLTPSVVGFTKNGDRLVGQLARRQAVLNSDNTVYSAKRFIGHRFSEVAAERKRVAYEVVQGPNDSVRFRIPAINKELSPEEISSMVLMKLKTDAEAYLGTKITKAVITVPAYFNDSQRQATKDAGKIAGLDVVRIINEPTAAALAYGLDKKKNETVLVWDLGGGTFDVSILEVGDGVFEVKSTSGDTHLGGDDYDLALANYLADEFRKDQGIDLKADKQAWQRLLEAAEKAKIELSSMTSTNISLPFITADQTGPKHLEMSITRAKFEDITRHLTERCIAPFKQALDDAKLKIEDIDEIILVGGSTRMPAVQELVKRLTGKEPNKGVNPDEVVAVGAAIQGAVLAGEVKDIVLLDVTPLSLGIETLGGVFTKMIERNTTIPTKKSEIFTTAEDNQPAVEIHVLQGERAMARDNRTLARFRLEGLPPAPRGVPQIEVTFDIDANGILTVHAKDLGTGKEQKVTVTGASTLSKEEIDEMIKKAEQFAEEDRRIKEEADTRNQAESFAYSLEKTLRDIGDKISQDEKSKIENGISELRDLIKKNASKSEIEAKMNELKQLSYKLSEEIYKSSSSGASSGSTTTGSSGQGPQEGEVIDADFKKEN
>NC_015499|761372:770510|764035_764941_+|WP_013756141.1|DBSCAN-SWA
MKYKDYYKILGVDRNATEKEIKQAYKKLARKYHPDLPGGDAEKFKEINEAHEVLSNPEKRKIYDQMGSSWTGQGVGSQNFNFNGNFYTQYNINPGEFDNIFDLINSIFGSSSKRGFSSRGFSPFDFFGKQQNVRTDIGQDVESEVTISLSEYLHGTTKKVNLPYLNKDVELKIPAGVKEGSKIRFKGLGQNGGDLYLKIKIEKDPRFSIDGDNIKTTANISLFTALLGGEIPIDTPEGRVKVKVPAGSSSGTILRLKGLGALKHNKTRGDLLVNINVQVPKNLSNEEKEIVTKWAKLRGEK
>NC_015499|761372:770510|768488_769136_+|WP_013756145.1|DBSCAN-SWA
MFKKNEERKGLLFVVSGPSGVGKGTVIKELMQRDPLLCLSISMTSRSRRPNEVDGKDYFFVSESEFLEHIEKDNLLEWAKVHGNYYGTPKDYVLKKLSENNDVILEIDTRGASKIKSLYPDAILIFIVPPRWCDLRLRLETRSSENFDEIKRRLSRSIEEIEEYFIYDYIIVNNSVIEAASELECIIVAQRARRERREDIISKLRSEIQFGQEVI
>NC_015499|761372:770510|769331_770510_+|WP_013756147.1|DBSCAN-SWA
MKILFGICGGISAYKAASFVSSLVKEGNEVNVVMTQNATRFVSPLTFEALTKNVCYSDSNLPSGKDAVAHITLPQSSDVFVICPATANTISKIALGIADNLLTTMAIARKCPLVLVPAMNDVMWSNPSLQDNVKRLLAQDVIFFGPTYGRLACESVGSGRMLEVSELLEMFNYHFYPKKDFVGKRILITAGPTREPIDPVRYISNRSSGKMGFAFAQIASLRGAQVKLISGPTSLSTPYMVERIDIETTEEMLKSVLDNFEFCDVLVMAAAVSDFKVDQQSSKKIKKKNSLELNLIANPDILKEISSLKKNQVVIGFAAETENLSENASKKLVEKKLDYIVANRISETGFPFGSENNEVLILSASGECYELNSTKIDIASFILDIIKERISF
>NC_015499|761372:770510|764940_765270_+|WP_013756142.1|DBSCAN-SWA
MPETSGFYAISIVSKMLSIHPQTIRRYEELGLICPKKLAGKTRVFSDEDIEILKKIQEFTKDLGINIAGVEVILRLSKRVEELESEVSRLNNLLKSISQEKEGENNESR
>NC_015499|761372:770510|767655_768489_+|WP_169309438.1|DBSCAN-SWA
MVNFFDIIWFIFIIFAFTPVLQQKYLENMRIRTIRSLEKKMGSRVITLIHRQETISFFGIPLSRYIDIDDSEQILRAIRLTEKDMPIDIILHTPGGLVLAAEQIAKALIRHPAPVRVFIPHYAMSGGTMLALAADEIYLDENAVLGPVDPQLGEYPAVSILQAVREKGIGNVDDRTLILADMSQKAINQVKSTIKRLLQDRMDSEKASFLAELFTSGKWTHDYPISYEEIKNLGISVRKDLPEEVYELMELYPQAGNRRPSVQFIPIPYKLPAKGNK

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013756139.1|761372_763280_+	molecular chaperone DnaK	G8DDB7	Micromonas_pusilla_virus	2.4e-149	49.2
WP_013756140.1|763473_764046_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_013756141.1|764035_764941_+	DnaJ domain-containing protein	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	1.7e-17	30.8
WP_013756142.1|764940_765270_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_013756143.1|765256_767659_+	AAA family ATPase	A0A1C3S747	Escherichia_phage	6.6e-133	39.7
WP_169309438.1|767655_768489_+	hypothetical protein	A0A1V0SCZ1	Indivirus	3.2e-18	29.4
WP_013756145.1|768488_769136_+	guanylate kinase	A0A1W6JK60	Lactococcus_phage	3.1e-13	32.4
WP_013756146.1|769138_769330_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_013756147.1|769331_770510_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	7.2e-40	30.9