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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_017641 Escherichia coli UMNK88, complete sequence 6 crisprs DinG,PrimPol,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK 0 18 17 0
NC_017639 Escherichia coli UMNK88 plasmid pUMNK88_K88, complete sequence 0 crisprs NA 0 0 2 0
NC_017645 Escherichia coli UMNK88 plasmid pUMNK88, complete sequence 0 crisprs DEDDh 0 0 1 0
NC_017642 Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence 0 crisprs cas14j 0 0 0 0
NC_017643 Escherichia coli UMNK88 plasmid pUMNK88_Hly, complete sequence 0 crisprs NA 0 0 0 0
NC_017640 Escherichia coli UMNK88 plasmid pUMNK88_Ent, complete sequence 0 crisprs RT 0 0 0 0

Results visualization

1. NC_017641
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017641_1 587367-587463 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017641_2 2699555-2699681 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017641_3 3234694-3234838 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017641_4 3304265-3305025 TypeI-E I-E
12 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017641_5 3330573-3331089 Unclear I-E
8 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017641_6 5077218-5077367 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_017641_4 4.6|3304599|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304599-3304630 32 NZ_CP042584 Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence 72360-72391 0 1.0
NC_017641_4 4.1|3304294|32|NC_017641|CRISPRCasFinder,CRT 3304294-3304325 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246937-246968 1 0.969
NC_017641_5 5.5|3330846|32|NC_017641|CRT 3330846-3330877 32 NZ_LR134258 Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence 3574-3605 3 0.906
NC_017641_5 5.5|3330846|32|NC_017641|CRT 3330846-3330877 32 LR134281 Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6 3567-3598 3 0.906
NC_017641_5 5.5|3330846|32|NC_017641|CRT 3330846-3330877 32 KY271401 Klebsiella phage 1 LV-2017, complete genome 21043-21074 3 0.906
NC_017641_5 5.13|3330846|33|NC_017641|PILER-CR,CRISPRCasFinder 3330846-3330878 33 NZ_LR134258 Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence 3574-3606 4 0.879
NC_017641_5 5.13|3330846|33|NC_017641|PILER-CR,CRISPRCasFinder 3330846-3330878 33 LR134281 Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6 3567-3599 4 0.879
NC_017641_5 5.13|3330846|33|NC_017641|PILER-CR,CRISPRCasFinder 3330846-3330878 33 KY271401 Klebsiella phage 1 LV-2017, complete genome 21043-21075 4 0.879
NC_017641_5 5.5|3330846|32|NC_017641|CRT 3330846-3330877 32 KY653119 Morganella phage IME1369_02, complete genome 18217-18248 5 0.844
NC_017641_4 4.10|3304843|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304843-3304874 32 NZ_AP018520 Sphingobium sp. YG1 plasmid pYGP1, complete sequence 43472-43503 6 0.812
NC_017641_5 5.13|3330846|33|NC_017641|PILER-CR,CRISPRCasFinder 3330846-3330878 33 KY653119 Morganella phage IME1369_02, complete genome 18216-18248 6 0.818
NC_017641_4 4.1|3304294|32|NC_017641|CRISPRCasFinder,CRT 3304294-3304325 32 MK455769 Aeromonas phage MJG, complete genome 10369-10400 7 0.781
NC_017641_4 4.6|3304599|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304599-3304630 32 MT446416 UNVERIFIED: Escherichia virus TH47, complete genome 160213-160244 7 0.781
NC_017641_4 4.6|3304599|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304599-3304630 32 KM507819 Escherichia phage 121Q, complete genome 77721-77752 7 0.781
NC_017641_5 5.4|3330785|32|NC_017641|CRT 3330785-3330816 32 NZ_CP007129 Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence 755173-755204 7 0.781
NC_017641_4 4.3|3304416|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304416-3304447 32 NZ_CP013415 Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence 218852-218883 8 0.75
NC_017641_4 4.11|3304904|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304904-3304935 32 NC_018454 Cronobacter phage phiES15, complete genome 8781-8812 8 0.75
NC_017641_4 4.11|3304904|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304904-3304935 32 JQ780327 Cronobacter phage phiES15, complete sequence 8781-8812 8 0.75
NC_017641_5 5.1|3330602|32|NC_017641|CRT 3330602-3330633 32 MK814759 Gordonia phage Reyja, complete genome 4467-4498 8 0.75
NC_017641_5 5.4|3330785|32|NC_017641|CRT 3330785-3330816 32 NZ_CP007070 Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence 191920-191951 8 0.75
NC_017641_5 5.12|3330785|33|NC_017641|PILER-CR,CRISPRCasFinder 3330785-3330817 33 NZ_CP007129 Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence 755172-755204 8 0.758
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229083-229131 9 0.816
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229184-229232 9 0.816
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229285-229333 9 0.816
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239577-239625 9 0.816
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239678-239726 9 0.816
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239779-239827 9 0.816
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230489-230537 9 0.816
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230590-230638 9 0.816
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230691-230739 9 0.816
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211459-211507 9 0.816
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211560-211608 9 0.816
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211661-211709 9 0.816
NC_017641_4 4.1|3304294|32|NC_017641|CRISPRCasFinder,CRT 3304294-3304325 32 NC_047954 Pseudomonas phage Njord, complete genome 11435-11466 9 0.719
NC_017641_4 4.3|3304416|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304416-3304447 32 NZ_CP014797 Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence 208455-208486 9 0.719
NC_017641_4 4.5|3304538|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304538-3304569 32 AP014022 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S32-C75, *** SEQUENCING IN PROGRESS *** 22698-22729 9 0.719
NC_017641_4 4.5|3304538|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304538-3304569 32 AP014023 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S35-C64, *** SEQUENCING IN PROGRESS *** 23700-23731 9 0.719
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP024236 Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence 57083-57114 9 0.719
NC_017641_4 4.9|3304782|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304782-3304813 32 NZ_CP009595 Bacillus cereus strain 3a plasmid pBFC_3, complete sequence 298003-298034 9 0.719
NC_017641_4 4.9|3304782|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304782-3304813 32 NZ_CP009606 Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence 164238-164269 9 0.719
NC_017641_4 4.9|3304782|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304782-3304813 32 NZ_CP053994 Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence 238009-238040 9 0.719
NC_017641_4 4.9|3304782|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304782-3304813 32 NZ_CP053992 Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence 221025-221056 9 0.719
NC_017641_5 5.6|3330907|32|NC_017641|CRT 3330907-3330938 32 NC_007959 Nitrobacter hamburgensis X14 plasmid 1, complete sequence 246573-246604 9 0.719
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229386-229434 10 0.796
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239880-239928 10 0.796
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230792-230840 10 0.796
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211762-211810 10 0.796
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 7442-7490 10 0.796
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 84266-84314 10 0.796
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 386508-386556 10 0.796
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14196-14244 10 0.796
NC_017641_4 4.1|3304294|32|NC_017641|CRISPRCasFinder,CRT 3304294-3304325 32 NC_047894 Pseudomonas phage uligo, complete genome 11353-11384 10 0.688
NC_017641_4 4.3|3304416|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304416-3304447 32 NZ_CP041349 Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence 27173-27204 10 0.688
NC_017641_4 4.3|3304416|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304416-3304447 32 NZ_CP041350 Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence 149091-149122 10 0.688
NC_017641_4 4.3|3304416|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304416-3304447 32 NZ_CP004365 Komagataeibacter xylinus E25 plasmid pGX5, complete sequence 172655-172686 10 0.688
NC_017641_4 4.6|3304599|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304599-3304630 32 MF403008 Agrobacterium phage Atu_ph07, complete genome 280549-280580 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_LT904879 Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2 19612-19643 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_KX129784 Escherichia coli strain H226B plasmid pH226B, complete sequence 115804-115835 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NC_009981 Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence 116173-116204 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029645 Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence 182725-182756 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP053721 Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence 110105-110136 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP026790 Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence 109122-109153 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP039717 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence 221496-221527 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 KP899804 Salmonella enterica strain F8475 plasmid pF8475, complete sequence 207469-207500 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 KP899805 Salmonella enterica strain 109/9 plasmid p109/9, complete sequence 199664-199695 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP037875 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence 13581-13612 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP018652 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence 73431-73462 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP044299 Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence 187798-187829 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029690 Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence 106322-106353 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NC_003384 Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence 148086-148117 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP049354 Escherichia coli strain T28R plasmid pT28R-1, complete sequence 93116-93147 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 AP020333 Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome 185318-185349 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP039559 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence 219648-219679 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP037911 Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence 158306-158337 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP046717 Escherichia coli strain T16R plasmid pT16R-1, complete sequence 93116-93147 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP046007 Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence 167798-167829 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NC_002305 Salmonella typhi plasmid R27, complete sequence 128806-128837 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP046004 Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence 91681-91712 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029895 Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence 183046-183077 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029877 Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence 182844-182875 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP033094 Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence 37794-37825 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 LT905061 Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2 36345-36376 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029926 Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence 124973-125004 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029947 Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence 184389-184420 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP044968 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence 94449-94480 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP044958 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence 26677-26708 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029943 Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence 182833-182864 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029953 Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence 183156-183187 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029955 Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence 183101-183132 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP022495 Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence 197454-197485 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP016184 Escherichia coli strain EC2 plasmid pEC2-4, complete sequence 205427-205458 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP016183 Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence 191663-191694 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029924 Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence 49708-49739 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029934 Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence 182844-182875 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NC_013365 Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence 126184-126215 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP041449 Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence 93117-93148 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029939 Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence 181554-181585 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029957 Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence 182609-182640 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029941 Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence 182936-182967 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029910 Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence 182844-182875 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029887 Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence 182670-182701 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029948 Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence 183046-183077 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029937 Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence 182572-182603 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029879 Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence 180358-180389 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP018656 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence 176026-176057 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NC_016825 Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence 130052-130083 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029931 Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence 182677-182708 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_CP029935 Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence 182461-182492 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_LT985296 Escherichia coli strain 1454 plasmid RCS78_p, complete sequence 41577-41608 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_MN101858 Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence 203153-203184 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_MN101856 Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence 109234-109265 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_MH733010 Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence 20553-20584 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 MT219825 Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence 58755-58786 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NZ_MG948335 Escherichia coli strain 3498 plasmid p3498, complete sequence 179219-179250 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NC_023277 Escherichia coli strain 63743 plasmid pEQ2, complete sequence 194749-194780 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 NC_023289 Escherichia coli strain T23 plasmid pEQ1, complete sequence 146284-146315 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 MT219824 Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence 176467-176498 10 0.688
NC_017641_4 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304721-3304752 32 MG874042 Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence 45801-45832 10 0.688
NC_017641_4 4.10|3304843|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304843-3304874 32 NZ_CP021914 Sagittula sp. P11 plasmid unnamed1, complete sequence 50199-50230 10 0.688
NC_017641_5 5.5|3330846|32|NC_017641|CRT 3330846-3330877 32 MF158039 Shigella phage Sf12, complete genome 4975-5006 10 0.688
NC_017641_5 5.5|3330846|32|NC_017641|CRT 3330846-3330877 32 MF158042 Shigella phage Sd1, complete genome 938-969 10 0.688
NC_017641_5 5.8|3331029|32|NC_017641|CRT 3331029-3331060 32 MN694016 Marine virus AFVG_250M811, complete genome 5413-5444 10 0.688
NC_017641_5 5.8|3331029|32|NC_017641|CRT 3331029-3331060 32 MN694190 Marine virus AFVG_250M608, complete genome 5350-5381 10 0.688
NC_017641_5 5.8|3331029|32|NC_017641|CRT 3331029-3331060 32 MN693920 Marine virus AFVG_250M810, complete genome 5422-5453 10 0.688
NC_017641_5 5.8|3331029|32|NC_017641|CRT 3331029-3331060 32 MN693800 Marine virus AFVG_250M813, complete genome 5404-5435 10 0.688
NC_017641_5 5.8|3331029|32|NC_017641|CRT 3331029-3331060 32 MN694355 Marine virus AFVG_250M627, complete genome 26040-26071 10 0.688
NC_017641_5 5.8|3331029|32|NC_017641|CRT 3331029-3331060 32 MN694554 Marine virus AFVG_250M812, complete genome 5416-5447 10 0.688
NC_017641_5 5.8|3331029|32|NC_017641|CRT 3331029-3331060 32 MN694404 Marine virus AFVG_250M623, complete genome 5369-5400 10 0.688
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194003-194051 11 0.776
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194096-194144 11 0.776
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194282-194330 11 0.776
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204497-204545 11 0.776
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204590-204638 11 0.776
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204776-204824 11 0.776
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195331-195379 11 0.776
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195424-195472 11 0.776
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195610-195658 11 0.776
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176286-176334 11 0.776
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176379-176427 11 0.776
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176565-176613 11 0.776
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 27282-27330 11 0.776
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 27381-27429 11 0.776
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 51834-51882 11 0.776
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_AP023209 Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence 19389-19437 11 0.776
NC_017641_4 4.7|3304660|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304660-3304691 32 MT344105 Acinetobacter phage fLi-Aba03, complete genome 32699-32730 11 0.656
NC_017641_4 4.7|3304660|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304660-3304691 32 MT344104 Acinetobacter phage fLi-Aba02, complete genome 32861-32892 11 0.656
NC_017641_4 4.7|3304660|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR 3304660-3304691 32 MT344103 Acinetobacter phage fEg-Aba01, complete genome 31614-31645 11 0.656
NC_017641_5 5.8|3331029|32|NC_017641|CRT 3331029-3331060 32 MN694191 Marine virus AFVG_250M444, complete genome 10652-10683 11 0.656
NC_017641_5 5.8|3331029|32|NC_017641|CRT 3331029-3331060 32 MN694065 Marine virus AFVG_250M443, complete genome 44541-44572 11 0.656
NC_017641_5 5.13|3330846|33|NC_017641|PILER-CR,CRISPRCasFinder 3330846-3330878 33 MF158039 Shigella phage Sf12, complete genome 4974-5006 11 0.667
NC_017641_5 5.13|3330846|33|NC_017641|PILER-CR,CRISPRCasFinder 3330846-3330878 33 MF158042 Shigella phage Sd1, complete genome 937-969 11 0.667
NC_017641_5 5.16|3331029|33|NC_017641|PILER-CR,CRISPRCasFinder 3331029-3331061 33 MN694016 Marine virus AFVG_250M811, complete genome 5413-5445 11 0.667
NC_017641_5 5.16|3331029|33|NC_017641|PILER-CR,CRISPRCasFinder 3331029-3331061 33 MN694190 Marine virus AFVG_250M608, complete genome 5350-5382 11 0.667
NC_017641_5 5.16|3331029|33|NC_017641|PILER-CR,CRISPRCasFinder 3331029-3331061 33 MN693920 Marine virus AFVG_250M810, complete genome 5422-5454 11 0.667
NC_017641_5 5.16|3331029|33|NC_017641|PILER-CR,CRISPRCasFinder 3331029-3331061 33 MN693800 Marine virus AFVG_250M813, complete genome 5404-5436 11 0.667
NC_017641_5 5.16|3331029|33|NC_017641|PILER-CR,CRISPRCasFinder 3331029-3331061 33 MN694554 Marine virus AFVG_250M812, complete genome 5416-5448 11 0.667
NC_017641_5 5.16|3331029|33|NC_017641|PILER-CR,CRISPRCasFinder 3331029-3331061 33 MN694404 Marine virus AFVG_250M623, complete genome 5369-5401 11 0.667
NC_017641_5 5.16|3331029|33|NC_017641|PILER-CR,CRISPRCasFinder 3331029-3331061 33 MN694355 Marine virus AFVG_250M627, complete genome 26039-26071 11 0.667
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 211730-211778 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 211930-211978 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194189-194237 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 222224-222272 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 222424-222472 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204683-204731 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 213058-213106 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 213258-213306 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195517-195565 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 194013-194061 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 194213-194261 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176472-176520 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 11511-11559 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 397088-397136 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 404133-404181 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 27994-28042 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 31299-31347 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 MG065691 UNVERIFIED: Campylobacter phage A11a, complete genome 33059-33107 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 MG065686 UNVERIFIED: Campylobacter phage A18a, complete genome 141016-141064 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 MF374379 Escherichia phage DN1, complete genome 31158-31206 12 0.755
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14105-14153 13 0.735
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 6859-6907 13 0.735
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NC_049343 Escherichia phage 500465-2, complete genome 31797-31845 13 0.735
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 MT230112 Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence 94-142 13 0.735
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 82842-82890 14 0.714
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 313592-313640 14 0.714
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 MG065691 UNVERIFIED: Campylobacter phage A11a, complete genome 63889-63937 14 0.714
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 MG065686 UNVERIFIED: Campylobacter phage A18a, complete genome 110186-110234 14 0.714
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP053721 Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence 198909-198957 14 0.714
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP019246 Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence 40305-40353 14 0.714
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP044299 Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence 91418-91466 14 0.714
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 102544-102592 15 0.694
NC_017641_2 2.1|2699594|49|NC_017641|CRISPRCasFinder 2699594-2699642 49 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 56031-56079 15 0.694

1. spacer 4.6|3304599|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 0, identity: 1.0

tgcataaaaaccagcgtgaagaactttgcagt	CRISPR spacer
tgcataaaaaccagcgtgaagaactttgcagt	Protospacer
********************************

2. spacer 4.1|3304294|32|NC_017641|CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 1, identity: 0.969

caagtgatatccatcatcgcatccagtgcgtc	CRISPR spacer
caagtgatgtccatcatcgcatccagtgcgtc	Protospacer
********.***********************

3. spacer 5.5|3330846|32|NC_017641|CRT matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 3, identity: 0.906

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaaccc	Protospacer
********************.*****.*** *

4. spacer 5.5|3330846|32|NC_017641|CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 3, identity: 0.906

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaaccc	Protospacer
********************.*****.*** *

5. spacer 5.5|3330846|32|NC_017641|CRT matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 3, identity: 0.906

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaaccc	Protospacer
********************.*****.*** *

6. spacer 5.13|3330846|33|NC_017641|PILER-CR,CRISPRCasFinder matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaacccc	Protospacer
********************.*****.*** * 

7. spacer 5.13|3330846|33|NC_017641|PILER-CR,CRISPRCasFinder matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaacccc	Protospacer
********************.*****.*** * 

8. spacer 5.13|3330846|33|NC_017641|PILER-CR,CRISPRCasFinder matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaacccc	Protospacer
********************.*****.*** * 

9. spacer 5.5|3330846|32|NC_017641|CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 5, identity: 0.844

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
gaaatgctggtcagcgttaacgccgcacaacc	Protospacer
*********** ********.****** *  *

10. spacer 4.10|3304843|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 6, identity: 0.812

tgttg-cagcggcgcaccgctgacggactcgcc	CRISPR spacer
-gttgatcgcggcgcaccgctgacttactcgac	Protospacer
 **** . ****************  ***** *

11. spacer 5.13|3330846|33|NC_017641|PILER-CR,CRISPRCasFinder matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
gaaatgctggtcagcgttaacgccgcacaacct	Protospacer
*********** ********.****** *  * 

12. spacer 4.1|3304294|32|NC_017641|CRISPRCasFinder,CRT matches to MK455769 (Aeromonas phage MJG, complete genome) position: , mismatch: 7, identity: 0.781

-caagtgatatccatcatcgcatccagtgcgtc	CRISPR spacer
gcctccgat-tccatcattgcatacagtgcgtc	Protospacer
 *   .*** ********.**** *********

13. spacer 4.6|3304599|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to MT446416 (UNVERIFIED: Escherichia virus TH47, complete genome) position: , mismatch: 7, identity: 0.781

tgcataaa-----aaccagcgtgaagaactttgcagt	CRISPR spacer
-----aaacagctaaacagcttgaagaactttgcagt	Protospacer
     ***     ** **** ****************

14. spacer 4.6|3304599|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 7, identity: 0.781

tgcataaa-----aaccagcgtgaagaactttgcagt	CRISPR spacer
-----aaacagctaaacagcttgaagaactttgcagt	Protospacer
     ***     ** **** ****************

15. spacer 5.4|3330785|32|NC_017641|CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

tggctctgcaacagcagcacccatgaccacgt	CRISPR spacer
cgctccagcaacagcagcacccacgaccacgg	Protospacer
.* ..* ****************.******* 

16. spacer 4.3|3304416|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013415 (Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence) position: , mismatch: 8, identity: 0.75

gactcaatggcaaccgtcacggcctgtcctgg	CRISPR spacer
gcctccatgacaaccgtcacggcctgtagatt	Protospacer
* *** ***.*****************     

17. spacer 4.11|3304904|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NC_018454 (Cronobacter phage phiES15, complete genome) position: , mismatch: 8, identity: 0.75

cggaactggtccagcgttaaccggcggcggat	CRISPR spacer
cggaacgtgtccagcgttaaccggggccacgc	Protospacer
******  **************** * *. ..

18. spacer 4.11|3304904|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to JQ780327 (Cronobacter phage phiES15, complete sequence) position: , mismatch: 8, identity: 0.75

cggaactggtccagcgttaaccggcggcggat	CRISPR spacer
cggaacgtgtccagcgttaaccggggccacgc	Protospacer
******  **************** * *. ..

19. spacer 5.1|3330602|32|NC_017641|CRT matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

-gacagaacggcctcagtagtctcgtcaggctc	CRISPR spacer
ccaccg-ctggccccagtagcctcgtcaggctt	Protospacer
  ** *  .****.******.***********.

20. spacer 5.4|3330785|32|NC_017641|CRT matches to NZ_CP007070 (Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tggctctgcaacagcagcacccatgaccacgt	CRISPR spacer
catcactgcaacatcagcatccatgaccgcat	Protospacer
.. * ******** *****.********.*.*

21. spacer 5.12|3330785|33|NC_017641|PILER-CR,CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758

tggctctgcaacagcagcacccatgaccacgtc	CRISPR spacer
cgctccagcaacagcagcacccacgaccacgga	Protospacer
.* ..* ****************.*******  

22. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

23. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

24. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

25. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

26. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

27. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

28. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

29. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

30. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

31. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

32. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

33. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

34. spacer 4.1|3304294|32|NC_017641|CRISPRCasFinder,CRT matches to NC_047954 (Pseudomonas phage Njord, complete genome) position: , mismatch: 9, identity: 0.719

caagtgatatccatcatcgcatccagtgcgtc	CRISPR spacer
gcctcggcctccatcatcgcatcgagtgcgtc	Protospacer
    .*.. ************** ********

35. spacer 4.3|3304416|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014797 (Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence) position: , mismatch: 9, identity: 0.719

gactcaatggcaaccgtcacggcctgtcctgg	CRISPR spacer
tcggcaatggcaaccgtcacaccctgtgcagc	Protospacer
    ****************. ***** * * 

36. spacer 4.5|3304538|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to AP014022 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S32-C75, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

gcggtcgattttgctggcgttgtttcggctgg	CRISPR spacer
ctccaaggttttgctggcgatgttttggctgg	Protospacer
 .    *.*********** *****.******

37. spacer 4.5|3304538|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to AP014023 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S35-C64, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

gcggtcgattttgctggcgttgtttcggctgg	CRISPR spacer
ctccagggttttgctggcgatgttttggctgg	Protospacer
 .    *.*********** *****.******

38. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgatattagaaaagttac	Protospacer
  . ** ********************  *  

39. spacer 4.9|3304782|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009595 (Bacillus cereus strain 3a plasmid pBFC_3, complete sequence) position: , mismatch: 9, identity: 0.719

atgtaatgaatattaagcttttcacattgtcc	CRISPR spacer
ctgtaatgaatattattcttttcattttcctt	Protospacer
 **************  *******. ** ...

40. spacer 4.9|3304782|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009606 (Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence) position: , mismatch: 9, identity: 0.719

atgtaatgaatattaagcttttcacattgtcc	CRISPR spacer
ctgtaatgaatattattcttttcattttcctt	Protospacer
 **************  *******. ** ...

41. spacer 4.9|3304782|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053994 (Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atgtaatgaatattaagcttttcacattgtcc	CRISPR spacer
ctgtaatgaatattattcttttcattttcctt	Protospacer
 **************  *******. ** ...

42. spacer 4.9|3304782|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053992 (Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

atgtaatgaatattaagcttttcacattgtcc	CRISPR spacer
ctgtaatgaatattattcttttcattttcctt	Protospacer
 **************  *******. ** ...

43. spacer 5.6|3330907|32|NC_017641|CRT matches to NC_007959 (Nitrobacter hamburgensis X14 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

attacgcctttttgcgattgcccggtttttgc	CRISPR spacer
tcgtcatctttttgcgattgggcggttttttc	Protospacer
 .  *..*************  ******** *

44. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

45. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

46. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

47. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

48. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .* 

49. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .* 

50. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga--	CRISPR spacer
cacaagtgccggatgcggcgtaaacgccttatccggcctacg--ccagact	Protospacer
. *..***********.****.********************  .*.**  

51. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gctggttgccggatgcggcgtgaacgccttatccggcctacattcggca	Protospacer
 *.** **********.************************. .. * *

52. spacer 4.1|3304294|32|NC_017641|CRISPRCasFinder,CRT matches to NC_047894 (Pseudomonas phage uligo, complete genome) position: , mismatch: 10, identity: 0.688

caagtgatatccatcatcgcatccagtgcgtc	CRISPR spacer
gcttctgcctccatcatcgcatcgagtgcgtc	Protospacer
    . .. ************** ********

53. spacer 4.3|3304416|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041349 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence) position: , mismatch: 10, identity: 0.688

gactcaatggcaaccgtcacggcctgtcctgg	CRISPR spacer
ttcctgatggcaaccgtggcggcctgtccgtc	Protospacer
  *...*********** .**********   

54. spacer 4.3|3304416|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041350 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence) position: , mismatch: 10, identity: 0.688

gactcaatggcaaccgtcacggcctgtcctgg	CRISPR spacer
ttcctgatggcgaccgtcacagcctgtccatc	Protospacer
  *...*****.********.********   

55. spacer 4.3|3304416|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP004365 (Komagataeibacter xylinus E25 plasmid pGX5, complete sequence) position: , mismatch: 10, identity: 0.688

gactcaatggcaaccgtcacggcctgtcctgg	CRISPR spacer
ttcctgatggcgaccgtcacagcctgtccatc	Protospacer
  *...*****.********.********   

56. spacer 4.6|3304599|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to MF403008 (Agrobacterium phage Atu_ph07, complete genome) position: , mismatch: 10, identity: 0.688

tgcataaaaaccagcgtgaagaactttgcagt	CRISPR spacer
ctgatgaaaaccagcgtgaagcacttcttatg	Protospacer
.  **.*************** ****. .*  

57. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

58. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

59. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

60. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

61. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

62. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

63. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

64. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

65. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

66. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

67. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

68. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

69. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

70. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

71. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

72. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

73. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

74. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

75. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

76. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

77. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

78. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

79. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

80. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

81. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

82. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

83. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

84. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

85. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

86. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

87. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

88. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

89. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

90. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

91. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

92. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

93. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

94. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

95. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

96. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

97. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

98. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

99. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

100. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

101. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

102. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

103. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

104. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

105. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

106. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

107. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

108. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

109. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

110. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

111. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

112. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

113. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

114. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

115. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

116. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

117. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

118. spacer 4.8|3304721|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 10, identity: 0.688

aattgattgctgggtgatattagaaaacgtcg	CRISPR spacer
cccggagtgctgggtgagattagaaaagttac	Protospacer
  . ** ********** *********  *  

119. spacer 4.10|3304843|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tgttgcagcggcgcaccgctgacggactcgcc	CRISPR spacer
tcgaaaagcggcgcaccgatgtcggactccaa	Protospacer
*   . ************ ** *******   

120. spacer 5.5|3330846|32|NC_017641|CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 10, identity: 0.688

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
cggcacttggggagcgttaatgctgcaaacaa	Protospacer
 ..   .*** ************.******* 

121. spacer 5.5|3330846|32|NC_017641|CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 10, identity: 0.688

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
cggcacttggagagcgttaatgctgcaaacaa	Protospacer
 ..   .*** ************.******* 

122. spacer 5.8|3331029|32|NC_017641|CRT matches to MN694016 (Marine virus AFVG_250M811, complete genome) position: , mismatch: 10, identity: 0.688

cctcatgtggattatattaatattatgggccg	CRISPR spacer
aagtatatggattatattgatattatggaaga	Protospacer
   .**.***********.*********.  .

123. spacer 5.8|3331029|32|NC_017641|CRT matches to MN694190 (Marine virus AFVG_250M608, complete genome) position: , mismatch: 10, identity: 0.688

cctcatgtggattatattaatattatgggccg	CRISPR spacer
aggtatatggattatattgatattatggaaga	Protospacer
   .**.***********.*********.  .

124. spacer 5.8|3331029|32|NC_017641|CRT matches to MN693920 (Marine virus AFVG_250M810, complete genome) position: , mismatch: 10, identity: 0.688

cctcatgtggattatattaatattatgggccg	CRISPR spacer
aagtatatggattatattgatattatggaaga	Protospacer
   .**.***********.*********.  .

125. spacer 5.8|3331029|32|NC_017641|CRT matches to MN693800 (Marine virus AFVG_250M813, complete genome) position: , mismatch: 10, identity: 0.688

cctcatgtggattatattaatattatgggccg	CRISPR spacer
aagtatatggattatattgatattatggaaga	Protospacer
   .**.***********.*********.  .

126. spacer 5.8|3331029|32|NC_017641|CRT matches to MN694355 (Marine virus AFVG_250M627, complete genome) position: , mismatch: 10, identity: 0.688

cctcatgtggattatattaatattatgggccg	CRISPR spacer
aagtatatggattatattgatattatggaaga	Protospacer
   .**.***********.*********.  .

127. spacer 5.8|3331029|32|NC_017641|CRT matches to MN694554 (Marine virus AFVG_250M812, complete genome) position: , mismatch: 10, identity: 0.688

cctcatgtggattatattaatattatgggccg	CRISPR spacer
aagtatatggattatattgatattatggaaga	Protospacer
   .**.***********.*********.  .

128. spacer 5.8|3331029|32|NC_017641|CRT matches to MN694404 (Marine virus AFVG_250M623, complete genome) position: , mismatch: 10, identity: 0.688

cctcatgtggattatattaatattatgggccg	CRISPR spacer
aggtatatggattatattgatattatggaaga	Protospacer
   .**.***********.*********.  .

129. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

130. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

131. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

132. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

133. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

134. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

135. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

136. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

137. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

138. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

139. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

140. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

141. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagc	Protospacer
. *.. .*********.************************** * .* 

142. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagt	Protospacer
. *.. .*********.************************** * .* 

143. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agctggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgc	Protospacer
  * ************.****.*******************.. *  * 

144. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggtgtgaacgccttatccggcctacggatggcc	Protospacer
* .  .**********.*.************************ * *  

145. spacer 4.7|3304660|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to MT344105 (Acinetobacter phage fLi-Aba03, complete genome) position: , mismatch: 11, identity: 0.656

ctttattccatcccttaatgctttgatgaaat	CRISPR spacer
tgaaccatcatccattaatactttgatgaaag	Protospacer
.    . .***** *****.*********** 

146. spacer 4.7|3304660|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to MT344104 (Acinetobacter phage fLi-Aba02, complete genome) position: , mismatch: 11, identity: 0.656

ctttattccatcccttaatgctttgatgaaat	CRISPR spacer
tgaaccatcatccattaatactttgatgaaag	Protospacer
.    . .***** *****.*********** 

147. spacer 4.7|3304660|32|NC_017641|CRISPRCasFinder,CRT,PILER-CR matches to MT344103 (Acinetobacter phage fEg-Aba01, complete genome) position: , mismatch: 11, identity: 0.656

ctttattccatcccttaatgctttgatgaaat	CRISPR spacer
tgaaccatcatccattaatactttgatgaaag	Protospacer
.    . .***** *****.*********** 

148. spacer 5.8|3331029|32|NC_017641|CRT matches to MN694191 (Marine virus AFVG_250M444, complete genome) position: , mismatch: 11, identity: 0.656

cctcatgtggattatattaatattatgggccg	CRISPR spacer
ggtcatgttgattataataatattacattaac	Protospacer
  ****** ******* ********..     

149. spacer 5.8|3331029|32|NC_017641|CRT matches to MN694065 (Marine virus AFVG_250M443, complete genome) position: , mismatch: 11, identity: 0.656

cctcatgtggattatattaatattatgggccg	CRISPR spacer
ggtcatgttgattataataatattacattaac	Protospacer
  ****** ******* ********..     

150. spacer 5.13|3330846|33|NC_017641|PILER-CR,CRISPRCasFinder matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
cggcacttggggagcgttaatgctgcaaacaat	Protospacer
 ..   .*** ************.*******  

151. spacer 5.13|3330846|33|NC_017641|PILER-CR,CRISPRCasFinder matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
cggcacttggagagcgttaatgctgcaaacaat	Protospacer
 ..   .*** ************.*******  

152. spacer 5.16|3331029|33|NC_017641|PILER-CR,CRISPRCasFinder matches to MN694016 (Marine virus AFVG_250M811, complete genome) position: , mismatch: 11, identity: 0.667

cctcatgtggattatattaatattatgggccgc	CRISPR spacer
aagtatatggattatattgatattatggaagaa	Protospacer
   .**.***********.*********.  . 

153. spacer 5.16|3331029|33|NC_017641|PILER-CR,CRISPRCasFinder matches to MN694190 (Marine virus AFVG_250M608, complete genome) position: , mismatch: 11, identity: 0.667

cctcatgtggattatattaatattatgggccgc	CRISPR spacer
aggtatatggattatattgatattatggaagaa	Protospacer
   .**.***********.*********.  . 

154. spacer 5.16|3331029|33|NC_017641|PILER-CR,CRISPRCasFinder matches to MN693920 (Marine virus AFVG_250M810, complete genome) position: , mismatch: 11, identity: 0.667

cctcatgtggattatattaatattatgggccgc	CRISPR spacer
aagtatatggattatattgatattatggaagaa	Protospacer
   .**.***********.*********.  . 

155. spacer 5.16|3331029|33|NC_017641|PILER-CR,CRISPRCasFinder matches to MN693800 (Marine virus AFVG_250M813, complete genome) position: , mismatch: 11, identity: 0.667

cctcatgtggattatattaatattatgggccgc	CRISPR spacer
aagtatatggattatattgatattatggaagaa	Protospacer
   .**.***********.*********.  . 

156. spacer 5.16|3331029|33|NC_017641|PILER-CR,CRISPRCasFinder matches to MN694554 (Marine virus AFVG_250M812, complete genome) position: , mismatch: 11, identity: 0.667

cctcatgtggattatattaatattatgggccgc	CRISPR spacer
aagtatatggattatattgatattatggaagaa	Protospacer
   .**.***********.*********.  . 

157. spacer 5.16|3331029|33|NC_017641|PILER-CR,CRISPRCasFinder matches to MN694404 (Marine virus AFVG_250M623, complete genome) position: , mismatch: 11, identity: 0.667

cctcatgtggattatattaatattatgggccgc	CRISPR spacer
aggtatatggattatattgatattatggaagaa	Protospacer
   .**.***********.*********.  . 

158. spacer 5.16|3331029|33|NC_017641|PILER-CR,CRISPRCasFinder matches to MN694355 (Marine virus AFVG_250M627, complete genome) position: , mismatch: 11, identity: 0.667

cctcatgtggattatattaatattatgggccgc	CRISPR spacer
aagtatatggattatattgatattatggaagaa	Protospacer
   .**.***********.*********.  . 

159. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

160. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

161. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

162. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

163. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

164. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

165. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

166. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

167. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

168. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

169. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

170. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

171. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
aatttttgccggatgcggcgtgaacgccttatccggcctacaacgggca	Protospacer
  .   **********.************************..*  * *

172. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga---	CRISPR spacer
cacaattgccggatgcggcgtaaacgccttatccggcctaca---tggataa	Protospacer
. *.. **********.****.*******************.   .***   

173. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttttcttgccggatgcggcgtaaacgccttatccggcctacaggacgtg	Protospacer
*..   **********.****.*******************.*  ** .

174. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ctcaaatgccggatgcggcgtgaacgccttatccggcctacgcacacta	Protospacer
..*...**********.*************************  .   *

175. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agcaaatgccggatgcggcgtaaacgccttatccggcctacatttggca	Protospacer
  *...**********.****.*******************. .* * *

176. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *  

177. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *  

178. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcg	Protospacer
* .  .**********.************************.. .** .

179. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gttgattgccggatgcggcgtaaacgccttatccggcctacattcggca	Protospacer
 ..*. **********.****.*******************. .. * *

180. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttgttttgccggatgcggcgtgaacgccttatccggcctacaaaaccat	Protospacer
*.    **********.************************..  * . 

181. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtgtttgccggatgcggcgtgaacgccttatccgacctacgtgtgacg	Protospacer
  .*  **********.******************.******  * . .

182. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttatgttgccggatgcggcgtaaacgccttatccggcctacaaaagcaa	Protospacer
*.  * **********.****.*******************..    .*

183. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gtaaaatgccggatgcggcgtgaacgccttatccggcctacaaaccaag	Protospacer
 . ...**********.************************.. .*...

184. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acaaaatgccggatgcggcgtaaacgccttatccggcctacaaaatcgt	Protospacer
 * ...**********.****.*******************..  . * 

185. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . . 

186. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . . 

187. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . * 

188. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtaaacgccttatccggcctacaaaaagcg	Protospacer
* .  .**********.****.*******************..   * .

189. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . * 

190. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtcaatgccggatgcggcgtgaacgccttatccggcctacaaaagcat	Protospacer
  . ..**********.************************..    . 

191. spacer 2.1|2699594|49|NC_017641|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtaaacgccttatccggcctacaaaaaacg	Protospacer
. * . **********.****.*******************..   . .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 199372 : 272224 55 Emiliania_huxleyi_virus(12.5%) transposase,tRNA,plate,protease NA
DBSCAN-SWA_2 280482 : 370316 96 Shigella_phage(53.85%) integrase,tail,protease,transposase,head,terminase,portal,holin,plate,capsid attL 294899:294954|attR 333562:333617
DBSCAN-SWA_3 914298 : 1044046 139 Salmonella_phage(34.65%) integrase,tail,protease,lysis,transposase,head,terminase,portal,holin,tRNA,plate,capsid attL 914072:914086|attR 1040758:1040777
DBSCAN-SWA_4 1253158 : 1260584 9 Stx2-converting_phage(50.0%) transposase NA
DBSCAN-SWA_5 1365452 : 1416131 59 Escherichia_phage(45.24%) integrase,tail,protease,lysis,head,terminase,portal,holin,tRNA,capsid attL 1363171:1363186|attR 1381954:1381969
DBSCAN-SWA_6 1616248 : 1638227 41 Salmonella_phage(31.82%) integrase attL 1612899:1612915|attR 1618502:1618518
DBSCAN-SWA_7 1642738 : 1672511 36 Salmonella_phage(50.0%) lysis,head,tail NA
DBSCAN-SWA_8 1852880 : 1957140 114 Enterobacteria_phage(38.33%) tail,integrase,transposase,lysis,head,terminase,portal,capsid attL 1887769:1887783|attR 1956170:1956184
DBSCAN-SWA_9 2342776 : 2413858 65 Escherichia_phage(41.67%) tail,integrase,protease,transposase,head,terminase,portal,holin,capsid attL 2358529:2358544|attR 2388597:2388612
DBSCAN-SWA_10 2458785 : 2467083 7 Enterobacteria_phage(28.57%) NA NA
DBSCAN-SWA_11 2561713 : 2571155 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_12 2782763 : 2856495 91 Enterobacteria_phage(52.46%) integrase,protease,coat,lysis,head,terminase,holin,tRNA attL 2787166:2787182|attR 2822315:2822331
DBSCAN-SWA_13 3002981 : 3046039 53 Escherichia_phage(57.14%) integrase,tail,holin,terminase attL 3004818:3004834|attR 3042925:3042941
DBSCAN-SWA_14 3123994 : 3204353 88 Escherichia_phage(25.93%) tail,protease,head,terminase,portal,holin,tRNA,capsid NA
DBSCAN-SWA_15 3283717 : 3296900 12 Escherichia_phage(40.0%) NA NA
DBSCAN-SWA_16 4304176 : 4317479 15 Morganella_phage(44.44%) integrase attL 4296977:4296989|attR 4307823:4307835
DBSCAN-SWA_17 4926535 : 4992619 60 Escherichia_phage(16.67%) transposase,tRNA,integrase,protease attL 4925179:4925193|attR 4965838:4965852
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_017639
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 23093 : 29594 8 Stx2-converting_phage(42.86%) NA NA
DBSCAN-SWA_2 57364 : 62692 8 Escherichia_phage(33.33%) integrase attL 56364:56378|attR 64044:64058
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NC_017645
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 108379 : 124791 15 Salmonella_phage(37.5%) integrase,transposase attL 114450:114509|attR 117561:118267
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage