CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_015556	Pseudomonas fulva 12-X, complete genome	3 crisprs	csa3,DEDDh,DinG,cas3	0	13	3	0

1. NC_015556

CRISPR-Cas detection and classification

Crispr_ID: NC_015556_1

• CRISPR_ID: NC_015556_1
• CRISPR_location: 346952-347817
• CRISPR_type: Orphan
• Repeat_type: I-F:NA
• Spacer_info: 14 spacers

Consensus repeat of NC_015556_1

Consensus_repeat	Method
TNNNCTGCCNNNNNGGCAGNNNAG	CRT
TTTCTGAGCTGCCTACACGGCAGTGAAG	PILER-CR
GTTCACTGCCGTATAGGCAGCTCAGAAA	CRISPRCasFinder
TTTCTGAGCTGCCTATACGGCAGTGAAC	PILER-CR

spacers of NC_015556_1

>1.1|346976|36|NC_015556|CRT
GTGGCGCCTTTCGTCACGGGCAGGTCTAGGCATTTC
>1.2|347036|36|NC_015556|CRT
CCCTCCGGCACCGCCACGCCCGCAGGATGTACTTTC
>1.3|347096|36|NC_015556|CRT
GTGGGCGAGGTGTGGGGCATCGGCCGGCGCCTTTTC
>1.4|347156|36|NC_015556|CRT
CGGCCTTGGCTGGAGGCCCATGTGGGCGAGCATTTC
>1.5|347216|36|NC_015556|CRT
CGCCTCTTCCTGGGCGGCAAAGCGCTCGGCCATTTC
>1.6|347276|36|NC_015556|CRT
TCGGAACCGTAGGCGTAATCCGAGTAATCCAATTTC
>1.7|347336|36|NC_015556|CRT
GCGGTACCAACAAGCTGAACCCTGGCCAGGGTTTTC
>1.8|347396|36|NC_015556|CRT
CTGCATGCCAGCCAGGCCACCCATGCCGTCATTTTC
>1.9|347456|36|NC_015556|CRT
AACACCTGCATCACCGGCATGCCGTTCATCTTTTTC
>1.10|347516|36|NC_015556|CRT
AAAAGCACGGTCGGTGCGTCAGCCATGGCAGCAGCG
>1.11|347576|36|NC_015556|CRT
AAAGACACGAAACGTATGCGGCACAACTCGATGTTG
>1.12|347636|36|NC_015556|CRT
AAATTTGCCATGGTTCACCTCGATCCCGGCCGAGGG
>1.13|347696|36|NC_015556|CRT
AAAATGAAGGCGAAGAGCAGTGCGCCGGCGAATGCG
>1.14|347756|35|NC_015556|CRT
AAATCGGAGACACTGCCAGGGTTTCTTTTGCCCGG
>1.15|347036|32|NC_015556|PILER-CR
CCCTCCGGCACCGCCACGCCCGCAGGATGTAC
>1.16|347096|32|NC_015556|PILER-CR
GTGGGCGAGGTGTGGGGCATCGGCCGGCGCCT
>1.17|347156|32|NC_015556|PILER-CR
CGGCCTTGGCTGGAGGCCCATGTGGGCGAGCA
>1.18|347216|32|NC_015556|PILER-CR
CGCCTCTTCCTGGGCGGCAAAGCGCTCGGCCA
>1.19|347276|32|NC_015556|PILER-CR
TCGGAACCGTAGGCGTAATCCGAGTAATCCAA
>1.20|347336|32|NC_015556|PILER-CR
GCGGTACCAACAAGCTGAACCCTGGCCAGGGT
>1.21|347396|32|NC_015556|PILER-CR
CTGCATGCCAGCCAGGCCACCCATGCCGTCAT
>1.22|347519|32|NC_015556|CRISPRCasFinder
AGCACGGTCGGTGCGTCAGCCATGGCAGCAGC
>1.23|347579|32|NC_015556|CRISPRCasFinder,PILER-CR
GACACGAAACGTATGCGGCACAACTCGATGTT
>1.24|347639|32|NC_015556|CRISPRCasFinder,PILER-CR
TTTGCCATGGTTCACCTCGATCCCGGCCGAGG
>1.25|347699|32|NC_015556|CRISPRCasFinder,PILER-CR
ATGAAGGCGAAGAGCAGTGCGCCGGCGAATGC
>1.26|347759|31|NC_015556|CRISPRCasFinder
TCGGAGACACTGCCAGGGTTTCTTTTGCCCG

CRISPR arrays and Neighbor proteins around NC_015556_1

CRISPR arrays

The CRISPR arrays of NC_015556_1

>merge|NC_015556|1|346952-347817|CRT,PILER-CR,CRISPRCasFinder,PILER-CR
GGGGCTGCCTATGCGGCAGTGAAGGTGGCGCCTTTCGTCACGGGCAGGTCTAGGCATTTCTGAGCTGCCTATACGGCAGTGAAGCCCTCCGGCACCGCCACGCCCGCAGGATGTACTTTCTGAGCTGCCTATACGGCAGTGAAGGTGGGCGAGGTGTGGGGCATCGGCCGGCGCCTTTTCTGAGCTGCCTACACGGCAGTGAAGCGGCCTTGGCTGGAGGCCCATGTGGGCGAGCATTTCTGAGCTGCCTACACGGCAGTGAAGCGCCTCTTCCTGGGCGGCAAAGCGCTCGGCCATTTCTGAGCTGCCTACACGGCAGTGAAGTCGGAACCGTAGGCGTAATCCGAGTAATCCAATTTCTGAGCTGCCTACACGGCAGTGAAGGCGGTACCAACAAGCTGAACCCTGGCCAGGGTTTTCTGAGCTGCCTACACGGCAGTGAAGCTGCATGCCAGCCAGGCCACCCATGCCGTCATTTTCTGAGCTGCCTACACGGCAGTGAAGAACACCTGCATCACCGGCATGCCGTTCATCTTTTTCTGAGCTGCCGTATAGGCAGCTCAGAAAAGCACGGTCGGTGCGTCAGCCATGGCAGCAGCGTTCACTGCCGTATAGGCAGCTCAGAAAGACACGAAACGTATGCGGCACAACTCGATGTTGTTCACTGCCGTATAGGCAGCTCAGAAATTTGCCATGGTTCACCTCGATCCCGGCCGAGGGTTCACTGCCGTATAGGCAGCTCAGAAAATGAAGGCGAAGAGCAGTGCGCCGGCGAATGCGTTCACTGCCGTATAGGCAGCTCATAAATCGGAGACACTGCCAGGGTTTCTTTTGCCCGGTTCACTGCCGCACAGGCAGCACTTTCT

>NC_015556|1|1|346952-347814|CRT
GGGGCTGCCTATGCGGCAGTGAAG	GTGGCGCCTTTCGTCACGGGCAGGTCTAGGCATTTC
TGAGCTGCCTATACGGCAGTGAAG	CCCTCCGGCACCGCCACGCCCGCAGGATGTACTTTC
TGAGCTGCCTATACGGCAGTGAAG	GTGGGCGAGGTGTGGGGCATCGGCCGGCGCCTTTTC
TGAGCTGCCTACACGGCAGTGAAG	CGGCCTTGGCTGGAGGCCCATGTGGGCGAGCATTTC
TGAGCTGCCTACACGGCAGTGAAG	CGCCTCTTCCTGGGCGGCAAAGCGCTCGGCCATTTC
TGAGCTGCCTACACGGCAGTGAAG	TCGGAACCGTAGGCGTAATCCGAGTAATCCAATTTC
TGAGCTGCCTACACGGCAGTGAAG	GCGGTACCAACAAGCTGAACCCTGGCCAGGGTTTTC
TGAGCTGCCTACACGGCAGTGAAG	CTGCATGCCAGCCAGGCCACCCATGCCGTCATTTTC
TGAGCTGCCTACACGGCAGTGAAG	AACACCTGCATCACCGGCATGCCGTTCATCTTTTTC
TGAGCTGCCGTATAGGCAGCTCAG	AAAAGCACGGTCGGTGCGTCAGCCATGGCAGCAGCG
TTCACTGCCGTATAGGCAGCTCAG	AAAGACACGAAACGTATGCGGCACAACTCGATGTTG
TTCACTGCCGTATAGGCAGCTCAG	AAATTTGCCATGGTTCACCTCGATCCCGGCCGAGGG
TTCACTGCCGTATAGGCAGCTCAG	AAAATGAAGGCGAAGAGCAGTGCGCCGGCGAATGCG
TTCACTGCCGTATAGGCAGCTCAT	AAATCGGAGACACTGCCAGGGTTTCTTTTGCCCGG
TTCACTGCCGCACAGGCAGCACTT

>NC_015556|1|1|347008-347455|PILER-CR
TTTCTGAGCTGCCTATACGGCAGTGAAG	CCCTCCGGCACCGCCACGCCCGCAGGATGTAC
TTTCTGAGCTGCCTATACGGCAGTGAAG	GTGGGCGAGGTGTGGGGCATCGGCCGGCGCCT
TTTCTGAGCTGCCTACACGGCAGTGAAG	CGGCCTTGGCTGGAGGCCCATGTGGGCGAGCA
TTTCTGAGCTGCCTACACGGCAGTGAAG	CGCCTCTTCCTGGGCGGCAAAGCGCTCGGCCA
TTTCTGAGCTGCCTACACGGCAGTGAAG	TCGGAACCGTAGGCGTAATCCGAGTAATCCAA
TTTCTGAGCTGCCTACACGGCAGTGAAG	GCGGTACCAACAAGCTGAACCCTGGCCAGGGT
TTTCTGAGCTGCCTACACGGCAGTGAAG	CTGCATGCCAGCCAGGCCACCCATGCCGTCAT
TTTCTGAGCTGCCTACACGGCAGTGAAGAACACCTGCATCACCGGCATGCCGTTCATCTTTTTCTGAGCTGCCGTATAGGCAGCTCAGAAAAGCACGGTCGGTGCGTCAGCCATGGCAGCAGCGTTCACTGCCGTATAGGCAGCTCAGAAA	GACACGAAACGTATGCGGCACAACTCGATGTT
GTTCACTGCCGTATAGGCAGCTCAGAAA	TTTGCCATGGTTCACCTCGATCCCGGCCGAGG
GTTCACTGCCGTATAGGCAGCTCAGAAA	ATGAAGGCGAAGAGCAGTGCGCCGGCGAATGC


>NC_015556|1|1|347491-347817|CRISPRCasFinder
CTGAGCTGCCGTATAGGCAGCTCAGAAA	AGCACGGTCGGTGCGTCAGCCATGGCAGCAGC
GTTCACTGCCGTATAGGCAGCTCAGAAA	GACACGAAACGTATGCGGCACAACTCGATGTT
GTTCACTGCCGTATAGGCAGCTCAGAAA	TTTGCCATGGTTCACCTCGATCCCGGCCGAGG
GTTCACTGCCGTATAGGCAGCTCAGAAA	ATGAAGGCGAAGAGCAGTGCGCCGGCGAATGC
GTTCACTGCCGTATAGGCAGCTCATAAA	TCGGAGACACTGCCAGGGTTTCTTTTGCCCG
GTTCACTGCCGCACAGGCAGCACTTTCT

>NC_015556|1|2|347551-347758|PILER-CR
	CCCTCCGGCACCGCCACGCCCGCAGGATGTAC
TTTCTGAGCTGCCTATACGGCAGTGAAG	GTGGGCGAGGTGTGGGGCATCGGCCGGCGCCT
TTTCTGAGCTGCCTACACGGCAGTGAAG	CGGCCTTGGCTGGAGGCCCATGTGGGCGAGCA
TTTCTGAGCTGCCTACACGGCAGTGAAG	CGCCTCTTCCTGGGCGGCAAAGCGCTCGGCCA
TTTCTGAGCTGCCTACACGGCAGTGAAG	TCGGAACCGTAGGCGTAATCCGAGTAATCCAA
TTTCTGAGCTGCCTACACGGCAGTGAAG	GCGGTACCAACAAGCTGAACCCTGGCCAGGGT
TTTCTGAGCTGCCTACACGGCAGTGAAG	CTGCATGCCAGCCAGGCCACCCATGCCGTCAT
TTTCTGAGCTGCCTACACGGCAGTGAAGAACACCTGCATCACCGGCATGCCGTTCATCTTTTTCTGAGCTGCCGTATAGGCAGCTCAGAAAAGCACGGTCGGTGCGTCAGCCATGGCAGCAGCGTTCACTGCCGTATAGGCAGCTCAGAAA	GACACGAAACGTATGCGGCACAACTCGATGTT
GTTCACTGCCGTATAGGCAGCTCAGAAA	TTTGCCATGGTTCACCTCGATCCCGGCCGAGG
GTTCACTGCCGTATAGGCAGCTCAGAAA	ATGAAGGCGAAGAGCAGTGCGCCGGCGAATGC
GTTCACTGCCGTATAGGCAGCTCATAAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_015556.1|WP_013789430.1|339826_341809_-|dynamin-like-GTPase-family-protein	unknown	unknown	gnl|CDD|223771
NC_015556.1|WP_013789447.1|356608_357016_+|response-regulator	unknown	unknown	gnl|CDD|381164
NC_015556.1|WP_013789436.1|345747_346893_+|PilT/PilU-family-type-4a-pilus-ATPase	unknown	unknown	gnl|CDD|227341
NC_015556.1|WP_013789428.1|337952_338573_-|methionine-biosynthesis-protein-MetW	unknown	unknown	gnl|CDD|254024
NC_015556.1|WP_013789427.1|337539_337944_-|DUF4426-domain-containing-protein	unknown	unknown	gnl|CDD|379616
NC_015556.1|WP_013789431.1|341918_342215_-|YggU-family-protein	unknown	unknown	gnl|CDD|179931
NC_015556.1|WP_013789433.1|342822_343641_-|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl|CDD|237008
NC_015556.1|WP_013789444.1|353780_354350_-|YqgE/AlgH-family-protein	unknown	unknown	gnl|CDD|234694
NC_015556.1|WP_013789440.1|350519_351791_-|dihydroorotase	unknown	unknown	gnl|CDD|236479
NC_015556.1|WP_013789445.1|354419_355316_-|energy-transducer-TonB	unknown	unknown	gnl|CDD|223880
NC_015556.1|WP_013789443.1|353337_353781_-|Holliday-junction-resolvase-RuvX	unknown	unknown	gnl|CDD|234639
NC_015556.1|WP_013789441.1|351790_352798_-|aspartate-carbamoyltransferase-catalytic-subunit	unknown	unknown	gnl|CDD|234849
NC_015556.1|WP_013789432.1|342220_342811_-|YggT-family-protein	unknown	unknown	gnl|CDD|376765
NC_015556.1|WP_013789429.1|338575_339715_-|homoserine-O-acetyltransferase	unknown	unknown	gnl|CDD|234678
NC_015556.1|WP_013789446.1|355418_356381_-|glutathione-synthase	unknown	unknown	gnl|CDD|235371
NC_015556.1|WP_013789442.1|352794_353316_-|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR	unknown	unknown	gnl|CDD|235365
NC_015556.1|WP_013789439.1|350000_350399_+|TM2-domain-containing-protein	unknown	unknown	gnl|CDD|222840
NC_015556.1|WP_013789438.1|348648_349860_-|putative-DNA-modification/repair-radical-SAM-protein	unknown	unknown	gnl|CDD|188431
NC_015556.1|WP_013789434.1|343678_344365_-|YggS-family-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|143497
NC_015556.1|WP_013789435.1|344501_345536_+|type-IV-pilus-twitching-motility-protein-PilT	unknown	unknown	gnl|CDD|225364

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_015556.1|WP_013789430.1|339826_341809_-|dynamin-like-GTPase-family-protein	gnl|CDD|223771	COG0699, COG0699, Predicted GTPases (dynamin-related) [General function prediction only].	1.56754e-24
NC_015556.1|WP_013789447.1|356608_357016_+|response-regulator	gnl|CDD|381164	cd19937, REC_OmpR_BsPhoP-like, phosphoacceptor receiver (REC) domain of BsPhoP-like OmpR family response regulators. Bacillus subtilis PhoP (BsPhoP) is part of the PhoPR two-component system that participates in a signal transduction network that controls adaptation of the bacteria to phosphate deficiency by regulating (activating or repressing) genes of the Pho regulon upon phosphorylation by PhoR. When activated, PhoPR directs expression of phosphate scavenging enzymes, lowers synthesis of the phosphate-rich wall teichoic acid (WTA) and initiates synthesis of teichuronic acid, a non-phosphate containing replacement anionic polymer. Members of this subfamily belong to the OmpR family of DNA-binding response regulators, which are characterized by a REC domain and a winged helix-turn-helix (wHTH) DNA-binding output effector domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.14286e-32
NC_015556.1|WP_013789436.1|345747_346893_+|PilT/PilU-family-type-4a-pilus-ATPase	gnl|CDD|227341	COG5008, PilU, Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion].	0
NC_015556.1|WP_013789428.1|337952_338573_-|methionine-biosynthesis-protein-MetW	gnl|CDD|254024	pfam07021, MetW, Methionine biosynthesis protein MetW. This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalyzed by the products of the metXW genes and is equivalent to the first step in enterobacteria, gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalyzed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In Pseudomonas putida, as in gram-positive bacteria and certain fungi, the second and third steps are a direct sulfhydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells.	1.65926e-111
NC_015556.1|WP_013789427.1|337539_337944_-|DUF4426-domain-containing-protein	gnl|CDD|379616	pfam14467, DUF4426, Domain of unknown function (DUF4426). Members of this entry are found mostly in g-proteobacteria, especially in Vibrio. Strangely enough, there seems to be one eukaryotic homolog in Nematostella vectensis (NEMVEDRAFT_v1g226006), where the PA0388-like domain is fused with a domain homogous to the Methionine biosynthesis protein MetW (see below). In several Pseudomonas species, but also in Vibrio vulnificus and Azotobacter vinelandii PA0388 homologs are genomic neighbors of Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) and Methionine biosynthesis protein MetW. On the other hand, in most Vibrio species it appears as a part of a conserved operon involved in possible response to stress.	1.16167e-47
NC_015556.1|WP_013789431.1|341918_342215_-|YggU-family-protein	gnl|CDD|179931	PRK05090, PRK05090, hypothetical protein; Validated.	1.59515e-51
NC_015556.1|WP_013789433.1|342822_343641_-|pyrroline-5-carboxylate-reductase	gnl|CDD|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	1.99789e-122
NC_015556.1|WP_013789444.1|353780_354350_-|YqgE/AlgH-family-protein	gnl|CDD|234694	PRK00228, PRK00228, YqgE/AlgH family protein.	1.84406e-95
NC_015556.1|WP_013789440.1|350519_351791_-|dihydroorotase	gnl|CDD|236479	PRK09357, pyrC, dihydroorotase; Validated.	0
NC_015556.1|WP_013789445.1|354419_355316_-|energy-transducer-TonB	gnl|CDD|223880	COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane].	6.30597e-21
NC_015556.1|WP_013789443.1|353337_353781_-|Holliday-junction-resolvase-RuvX	gnl|CDD|234639	PRK00109, PRK00109, Holliday junction resolvase RuvX.	2.78663e-67
NC_015556.1|WP_013789441.1|351790_352798_-|aspartate-carbamoyltransferase-catalytic-subunit	gnl|CDD|234849	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit.	0
NC_015556.1|WP_013789432.1|342220_342811_-|YggT-family-protein	gnl|CDD|376765	pfam02325, YGGT, YGGT family. This family consists of a repeat found in conserved hypothetical integral membrane proteins. The function of this region and the proteins which possess it is unknown.	1.38476e-10
NC_015556.1|WP_013789429.1|338575_339715_-|homoserine-O-acetyltransferase	gnl|CDD|234678	PRK00175, metX, homoserine O-acetyltransferase; Provisional.	0
NC_015556.1|WP_013789446.1|355418_356381_-|glutathione-synthase	gnl|CDD|235371	PRK05246, PRK05246, glutathione synthetase; Provisional.	0
NC_015556.1|WP_013789442.1|352794_353316_-|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR	gnl|CDD|235365	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR.	3.10828e-76
NC_015556.1|WP_013789439.1|350000_350399_+|TM2-domain-containing-protein	gnl|CDD|222840	PHA01886, PHA01886, TM2 domain-containing protein.	3.49334e-14
NC_015556.1|WP_013789438.1|348648_349860_-|putative-DNA-modification/repair-radical-SAM-protein	gnl|CDD|188431	TIGR03916, hypothetical_protein, putative DNA modification/repair radical SAM protein. This uncharacterized protein of about 400 amino acids in length contains a radical SAM protein in the N-terminal half. Members are present in about twenty percent of prokaryotic genomes, always paired with a member of the conserved hypothetical protein TIGR03915. Roughly forty percent of the members of that family exist as fusions with a uracil-DNA glycosylase-like region, TIGR03914. In DNA, uracil results from deamidation of cytosine, forming U/G mismatches that lead to mutation, and so uracil-DNA glycosylase is a DNA repair enzyme. This indirect connection, and the recurring role or radical SAM protein in modification chemistries, suggest that this protein may act in DNA modification, repair, or both. [Unknown function, Enzymes of unknown specificity].	0
NC_015556.1|WP_013789434.1|343678_344365_-|YggS-family-pyridoxal-phosphate-dependent-enzyme	gnl|CDD|143497	cd06824, PLPDE_III_Yggs_like, Pyridoxal 5-phosphate (PLP)-binding TIM barrel domain of Type III PLP-Dependent Enzymes, Yggs-like proteins. This subfamily contains mainly uncharacterized proteobacterial proteins with similarity to the hypothetical Escherichia coli protein YggS, a homolog of yeast YBL036c, which is homologous to a Pseudomonas aeruginosa gene that is co-transcribed with a known proline biosynthetic gene. Like yeast YBL036c, Yggs is a single domain monomeric protein with a typical TIM-barrel fold. Its structure, which shows a covalently-bound PLP cofactor, is similar to the N-terminal domain of the fold type III PLP-dependent enzymes, bacterial alanine racemase and eukaryotic ornithine decarboxylase, which are two-domain dimeric proteins. YggS has not been characterized extensively and its biological function is still unkonwn.	1.70488e-142
NC_015556.1|WP_013789435.1|344501_345536_+|type-IV-pilus-twitching-motility-protein-PilT	gnl|CDD|225364	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].	0

Protein sequences

>NC_015556.1|WP_013789436.1|345747_346893_+|PilT/PilU-family-type-4a-pilus-ATPase
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGKIMPVTKTPLSPEMTRETVHGVMNEQQRREFAENHECNFAISARGIGRFRVSAFYQRNLAGMVLRRIETNIPTLDDLKLPEILKKLALTKRGLVLFVGATGTGKSTSLAAMIGYRNKNSSGHIISIEDPIEYIHQHQNCIVTQREVGIDTDSFEVALKNTLRQAPDVILIGEVRTRETMDHAVAFAETGHLCLATLHANNANQALDRIINFFPADRQNQVWMDLSLNLKAIVAQQLIPTPDGKGRRAVIEVLINTPLAADLIRKGEVHELKGLMKRSTEHGMQTFDQALYNLYSQGEITYEDALLYADSANDLRLMIKLGSETDGEHLTSMSQGLALEISDEDQGRRFR
>NC_015556.1|WP_013789435.1|344501_345536_+|type-IV-pilus-twitching-motility-protein-PilT
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPALDHKQVHALIYDIMNDKQRKDFEEFLETDFSFEVPGVARFRVNAFNQNRGSGAVFRTIPSKVLSMEDLGMGEIFKKVSDVPRGLVLVTGPTGSGKSTTLAAMLDYINSNKYHHILTVEDPIEFVHESKKCLVNQREVHRDTHGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKSMVRSMLSESLQAVISQTLLKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGALGMETLDSCLKRLVSKGLVSRESAREKAKTPENF
>NC_015556.1|WP_013789434.1|343678_344365_-|YggS-family-pyridoxal-phosphate-dependent-enzyme
MSTIAENIAKVGVRIREAAQASQRDFSSVGLLAVSKTKPADAIREAHAAGLRDFGENYLQEALDKQALLTDLPLTWHFIGPIQSNKTRPIAEHFAWVHSVDRLKVAERLSAQRPAELAPLNICLQVNVSGEASKSGCQPEQLAELAQAVTQLPNLRLRGLMTIPAPTDDVAEQRAAFARLRALRDALNLDLDTLSMGMSHDLEAAIAEGASWVRIGTALFGERDYGKV
>NC_015556.1|WP_013789433.1|342822_343641_-|pyrroline-5-carboxylate-reductase
MTSPRIAFIGAGNMAASLIGGLLAQGLPASAIRASDRGAEQREKIAAEHGIDVVASNAEACRDADVIVLAVKPQVMKDVCLDLAPHVQAGQLIVSIAAGITSASLENWLGARAIVRCMPNTPSLLRLGASGLYANAQVSAEQRQQAEQLLSAVGMAVWLDEEKLIDAVTAVSGSGPAYFFLLIEAMTASGEKLGLPRDVAAKLTMQTALGAAQMALNSDVDAAELRRRVTSPAGTTEAAIKTFQAGGFEALVEQAVKAADQRSAELAEQLGQ
>NC_015556.1|WP_013789432.1|342220_342811_-|YggT-family-protein
MIGLNTAAIYILQTIGSFYLLIVLLRFILQLVRADFYNPLSQFIVRATHPILKPLRRIIPSLGGLDLASLVLALIVQFVLMALTLMLMGVGISDPLLILVWSIIGVTALLLKVFFFALIISVILSWVAQGTHNPAALLVNQICEPLLMPIRRVLPNLGGLDLSPIVAFLILNLIDMLVIRNLAISTGMFSGLSLAI
>NC_015556.1|WP_013789431.1|341918_342215_-|YggU-family-protein
MAFFRWDGDALILDCHLQPKASNDAFAGLHGERLKIRLTAPPVDGKANAHLLAFLAAAFGVAKSQVSLESGQQSRQKRVRIKAPTTLPAELGLTARPS
>NC_015556.1|WP_013789430.1|339826_341809_-|dynamin-like-GTPase-family-protein
MSMERLSEQVDAYVAWKRELVREITRYRSWLAHNRLSSEGVEARLERALRLLRTDHITLAFVGEFSRGKTELINSLFFSEYGQRLLPSQAGRTTMCPTEILFDPGAEQPYIRLLPIETRIAEASVAQFKRTPRHWVNVPLDTSDPDGMAKAFAQVAASKAMPVEKAISLGFHPDNLESTDKSGQVLVPAWRHAIVNFDHPLLRQGLRILDTPGLNALGCEPELTLSMLPSAQAVIFLLSADTGVTASDLDIWQQHVQPLDEERQGCLYAVLNKIDVLWDDLAGDTFVANAIERVRMQAARHLGIPGRDILPLSAKQALLAKVRKDPGLLARSQMAELETLLCERIVAQKEHLLEERVVRQVLAMLTNSQHVLGLRLAKVSEQLELLDERRQDNGQMLMELTSRTKDDHTLHHKRLVALRTNQRLLRNQGERLKTSAQAEKLEAHLALLRRQLNGAWTTLGINQSILNFFTAVEDDLHSLSHDADMANRMVEAIYRRHNEENPLQAVDAPRFELADYVRELRQLQKKGDRFRLGLKALLTEQRSLGRRFFATLVQEVIGLHRRLRRDAERWADEALMPLMQHTLEHKQLLEGHMLRLKALAQDTQHGRQRHQQLAQYAAELKGQLTQAGDMLRVMRRPAPIQRQAKVVTLKGMPRPTGNLE
>NC_015556.1|WP_013789429.1|338575_339715_-|homoserine-O-acetyltransferase
MSTVFPQDSVGLVTPQVARFAEPLALACGRSLADYQLIYETYGELNANASNAVLICHALSGHHHAAGYHSADDRKPGWWDSCIGPGKPIDTNKFFVVSLNNLGGCNGSTGPSDINPATGKPFGADFPVMTVEDWVNSQARLADLLGIGQWAAVIGGSLGGMQAMQWTISYPERVRHCLAIASAPKLSAQNIAFNEVARQAILTDPEFHGGHFQDQGVIPKRGLMLARMVGHITYLSDDAMGEKFGRGLKNEKLNYDFHSVEFQVESYLRYQGEEFSGRFDANTYLLMTKALDYFDPAAEHDGDLAKTLAKAKADFCVMSFTTDWRFSPARSREIVNALLAARKNVCYLEIDAPQGHDAFLMPIPRYLQGFASYMKRIEV
>NC_015556.1|WP_013789428.1|337952_338573_-|methionine-biosynthesis-protein-MetW
MRADLEIIQEWIPAGSRVLDLGCGDGELLAWLGANKQVTGYGLEIDPDKIAQCIGKGVNVIEQNLDEGLGNFASDSFDVVVMTQSLQALHFPDKVLAEMLRVGKTCIITFPNFGHWRCRWYLASKGRMPVSDFLPYTWYNTPNIHFCTFEDFERLCHQQSARVLDRLAVDREHRHGWASRAWPNLLGEIGIYRISGHNAHDVRIAN
>NC_015556.1|WP_013789427.1|337539_337944_-|DUF4426-domain-containing-protein
MRLLIVLMALCLSLSAAADGRMQRLGDLQVHYSAFNASYLQPQIAHASGLVRSGKLGVLNVSVLRDGKSAPAQVSGEVRNVLGHGQTLTFIEQREGEFVSYLAQFPLESREVLLFNLQVNGQRLDFNQELFPEP
>NC_015556.1|WP_013789438.1|348648_349860_-|putative-DNA-modification/repair-radical-SAM-protein
MELIEKLTVLADAAKYDVSCASSGAPKRSSKGQSGMGATDGMGICHSFTPDGRCVALLKILLTNFCLYDCQYCVNRRSSDVPRARFTPEEVVTLTLDFYRRNCISGLFLSSGIIRSADYTMEQLNRVAKLLREEHEFRGYIHLKTIPDASPELIAEAGRYADRLSVNIELPTESSLIRLAPEKSVAPIKQAMGTIRNGVEEADSEKRAPAFAPAGQSTQMIVGADATDDSTILHTAQSLYGDFRLKRVYYSAFSPIPQSPKSVPFEAPPLLREHRLYQADFLMRGYGFKATELLDGPGNLALDIDPKLAWALNNRQLFPVDLNRADVTLIARIPGIGVLSAQRLVALRRQKRIRFEDVGRLRCVLEKAKPFIVTQDYRPAQATRESLVLRQQLSEAPQQMGLW
>NC_015556.1|WP_013789439.1|350000_350399_+|TM2-domain-containing-protein
MQRPDTHSKIIGYLLWIFGFLGAHRFYYGKPVTGTIWFFTLGLLFIGWIIDLFLIPAMDREADLRFTAGRIDYNVAWILLTFLGIFGVHRMYQGKWITGILYLLTGGLFLVGVLYDLWTLNNQVSIENARNG
>NC_015556.1|WP_013789440.1|350519_351791_-|dihydroorotase
MRTRILGARVIDPSSGFDQVADLYIEGGKLSAVGQAPAGFEADQTLDANGLVAAPGLVDLSVALREPGYSRKGNIASETLAAAAGGVTSLCCPPITKPVLDTSAVAELILDRAREAGHAKVFPIGALSKGLDGEQLAELVALRDAGCVAFGNGLNNFRNARTLRRALEYAATFDLTVIFHSQDHDLAEGGLAHEGATASFLGLSGIPETAETVALARDLLLVEQSGVRAHFSQLTSARGAQLIADAQARGLPVTADVALYQLILTDEALIDFSSLYHVQPPLRTRADRDGLREAVKSGVISAISSHHQPHELDAKLAPFGETEPGISGVQLLLPLAMTLAQDGLLDLPTLLARLSSGPAQALRLPVGQLKQGDAADILLFDPQASTVAGESWHSKGRNSPFLGHCLPSQVRYTLVDGHISFQG
>NC_015556.1|WP_013789441.1|351790_352798_-|aspartate-carbamoyltransferase-catalytic-subunit
MTALDAKRPLQLNDQGQLRHFLSLDGLPRELLTEILDTADSFLEVGARAVKKVPLLRGKTVCNVFFENSTRTRTTFELAAQRLSADVISLNVSTSSTSKGETLFDTLRNLEAMAADIFVVRHAGSGAAHFIAEHVCPNLAIINGGDGRHAHPTQGMLDMLTIRRHKGSFENLSVAIVGDILHSRVARSNMLALKTLGCPDIRVIAPKTLLPIGLEESYGVRVFSDANEGLKDVDVVIMLRLQRERMTGGLLPSEGEFYRLFGLTEQRLKLAKPDALVMHPGPINRGVEIESAVADGPQSVILNQVTYGIAIRMAVLSMAMSGQNAQRQLNAEEHN
>NC_015556.1|WP_013789442.1|352794_353316_-|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR
MSLPNPAELLPQMATSLSNHLSRRQISTPRFIGIRTGGVWVAQALLEQLGRDEPLGVLDVSFYRDDFTQNGLHPQVQPSELPFEIEGQHLVLIDDVLMSGRTIRAALNELFDYGRPASVTLVSLLDLDARELPIRPDVVGATLSLAADQRVKLSGPAPFTLELQTLSDQGRPQ
>NC_015556.1|WP_013789443.1|353337_353781_-|Holliday-junction-resolvase-RuvX
MAEVDKQSLRLLLGFDYGTKQIGVAVGQPITGSARELCILKAQNGVPDWQKVEALIKEWQPDAIVVGLPLNMDGTPSDMSERAEKFARRLNGRFNLPVFTHDERLTTYAAKGERLQQGQTGGYRQRPVDALAAALLLQGWLEENCLG
>NC_015556.1|WP_013789444.1|353780_354350_-|YqgE/AlgH-family-protein
MKDASPSILKHHFLIAMPHMDDPNFAHTVIYLIDHNDQGAMGLVINRPNGLNLADVLEQLRPESTPSVLCQSLPIFSGGPVQTDRGFVLHPKGQHFQATVELGDLSLSTSQDVLFAIAEGSGPANHLIALGYAGWGAGQLEAELADNAWLTCPANQAILFETPYDQRLGAAAALLGINLNLLTAQAGHA
>NC_015556.1|WP_013789445.1|354419_355316_-|energy-transducer-TonB
MNATATPPDLTPSGVRPADRLGFTLFLAAVLHAALILGVGFTFAEPGQISKTLEITLSTFKSDEKPKEADFLAQDNQQGSGTLEKKAAPTTTEQAPFQDTEVRKVTPAAAPPPPAVKPEAPKAAVTTRAPQQQKAPAKREETKPTPPSQEAPSFDSAQLSAEIASLEAELSDQVQQYAKRPKIHRLNAASTMRDKGAWYKDEWRKKVERIGNLNYPDDARRRQIHGSLRLLVSINRDGSLYEVMVLESSGEQVLDQAAMRIVRLAAPYAPFTGDLADIDRLEIIRTWRFERGDRLSSN
>NC_015556.1|WP_013789446.1|355418_356381_-|glutathione-synthase
MSVRLGIVMDPIAQISYKKDSSLAMLLAAQARGWSLFYMEQKDLYQAAGVARGRTRPLKVFADPQHWFEFGDEQDMPLTELDVILMRKDPPFDNEFVYSTYLLEQAEEAGTLVVNRPQSLRDCNEKFFATRFPQFTPETLVSRRPDILRDFARQHRDIILKPLDGMGGSMIFRHREGDPNLSVILEALTAHGSQQIMAQRYLPAIVDGDKRILMIDGEPVPYCLARIPASGETRGNLAAGGRGEARPLTERDREIAAAVGPSLRERGLLFVGLDVIGDRLTEINVTSPTCIREIDAAFDTRIGERLMDKIAEKLNARSAS
>NC_015556.1|WP_013789447.1|356608_357016_+|response-regulator
MEQHSEGLRVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPSIIFVDIMMPRLDGYQTCALIKNNSAFKSTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPEFSPVEQAS

Crispr_ID: NC_015556_2

• CRISPR_ID: NC_015556_2
• CRISPR_location: 1763129-1763217
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_015556_2

Consensus_repeat	Method
CCGCCCTTGCGGCCTGCTTCGGC	CRISPRCasFinder

spacers of NC_015556_2

>2.1|1763152|43|NC_015556|CRISPRCasFinder
GGCCTTCTGGCGATCATTGGCGAAATTGCCGCCGCTTTGTTTA

CRISPR arrays and Neighbor proteins around NC_015556_2

CRISPR arrays

The CRISPR arrays of NC_015556_2

>merge|NC_015556|2|1763129-1763217|CRISPRCasFinder
CCGCCCTTGCGGCCTGCTTCGGCGGCCTTCTGGCGATCATTGGCGAAATTGCCGCCGCTTTGTTTACCACCCTTGCGGCCTGCTTCGGC

>NC_015556|2|2|1763129-1763217|CRISPRCasFinder
CCGCCCTTGCGGCCTGCTTCGGC	GGCCTTCTGGCGATCATTGGCGAAATTGCCGCCGCTTTGTTTA
CCACCCTTGCGGCCTGCTTCGGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_015556.1|WP_013790756.1|1773560_1775006_-|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl|CDD|223732
NC_015556.1|WP_013790743.1|1759231_1761691_+|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|237425
NC_015556.1|WP_013790738.1|1752598_1753003_+|anti-sigma-regulatory-factor	unknown	unknown	gnl|CDD|340411
NC_015556.1|WP_013790736.1|1751383_1752235_+|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_015556.1|WP_013790739.1|1752999_1754010_+|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl|CDD|340411
NC_015556.1|WP_041706297.1|1763633_1763900_+|DUF1652-domain-containing-protein	unknown	unknown	gnl|CDD|311697
NC_015556.1|WP_013790745.1|1762314_1762719_-|DoxX-family-protein	unknown	unknown	gnl|CDD|225168
NC_015556.1|WP_013790753.1|1771297_1772359_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|187652
NC_015556.1|WP_081470735.1|1772954_1773545_+|cysteine-hydrolase	unknown	unknown	gnl|CDD|238496
NC_015556.1|WP_013790737.1|1752239_1752602_+|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_015556.1|WP_013790741.1|1754867_1756811_+|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl|CDD|237425
NC_015556.1|WP_013790749.1|1764187_1766713_-|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|237425
NC_015556.1|WP_013790751.1|1768859_1769495_+|LysE-family-translocator	unknown	unknown	gnl|CDD|224199
NC_015556.1|WP_013790748.1|1763920_1764175_+|hypothetical-protein	unknown	unknown	unknown
NC_015556.1|WP_013790752.1|1769568_1771035_-|alanine:cation-symporter-family-protein	unknown	unknown	gnl|CDD|376500
NC_015556.1|WP_013790742.1|1757119_1759078_+|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl|CDD|223910
NC_015556.1|WP_013790750.1|1766981_1768778_+|GGDEF-and-EAL-domain-containing-protein	unknown	unknown	gnl|CDD|238923
NC_015556.1|WP_013790744.1|1761709_1762096_-|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|240025
NC_015556.1|WP_013790740.1|1754002_1754878_+|two-component-sensor-histidine-kinase	unknown	unknown	gnl|CDD|274362
NC_015556.1|WP_013790754.1|1772446_1772827_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|224647

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_015556.1|WP_013790756.1|1773560_1775006_-|SulP-family-inorganic-anion-transporter	gnl|CDD|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	2.14297e-115
NC_015556.1|WP_013790743.1|1759231_1761691_+|PAS-domain-containing-protein	gnl|CDD|237425	PRK13557, PRK13557, histidine kinase; Provisional.	1.21455e-138
NC_015556.1|WP_013790738.1|1752598_1753003_+|anti-sigma-regulatory-factor	gnl|CDD|340411	cd16934, HATPase_RsbT-like, Histidine kinase-like ATPase domain of the anti sigma-B factor Bacillus subtilis serine/threonine-protein kinase RsbT, and related domains. This family includes the histidine kinase-like ATPase (HATPase) domain of Bacillus subtilis serine/threonine-protein kinase RsbT, a component of the stressosome signaling complex of Bacillus subtilis. The stressosome is formed from multiple copies of three proteins, a sensor protein RsbR, a scaffold protein RsbS, and RsbT, and responds to environmental changes by initiating a protein partner switching cascade. Stress perception increases the phosphorylation of RsbR and RsbS, by RsbT. Subsequent dissociation of RsbT from the stressosome activates the sigma-B cascade, leading to the release of the alternative sigma factor, sigma-B.	2.23651e-36
NC_015556.1|WP_013790736.1|1751383_1752235_+|STAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	5.55135e-45
NC_015556.1|WP_013790739.1|1752999_1754010_+|SpoIIE-family-protein-phosphatase	gnl|CDD|340411	cd16934, HATPase_RsbT-like, Histidine kinase-like ATPase domain of the anti sigma-B factor Bacillus subtilis serine/threonine-protein kinase RsbT, and related domains. This family includes the histidine kinase-like ATPase (HATPase) domain of Bacillus subtilis serine/threonine-protein kinase RsbT, a component of the stressosome signaling complex of Bacillus subtilis. The stressosome is formed from multiple copies of three proteins, a sensor protein RsbR, a scaffold protein RsbS, and RsbT, and responds to environmental changes by initiating a protein partner switching cascade. Stress perception increases the phosphorylation of RsbR and RsbS, by RsbT. Subsequent dissociation of RsbT from the stressosome activates the sigma-B cascade, leading to the release of the alternative sigma factor, sigma-B.	6.79518e-23
NC_015556.1|WP_041706297.1|1763633_1763900_+|DUF1652-domain-containing-protein	gnl|CDD|311697	pfam07865, DUF1652, Protein of unknown function (DUF1652). This is a family containing hypothetical bacterial proteins.	2.79764e-21
NC_015556.1|WP_013790745.1|1762314_1762719_-|DoxX-family-protein	gnl|CDD|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	3.39044e-06
NC_015556.1|WP_013790753.1|1771297_1772359_-|SDR-family-oxidoreductase	gnl|CDD|187652	cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta-reductase-like proteins (5beta-POR), atypical (a) SDRs. 5beta-POR catalyzes the reduction of progesterone to 5beta-pregnane-3,20-dione in Digitalis plants. This subgroup of atypical-extended SDRs, shares the structure of an extended SDR, but has a different glycine-rich nucleotide binding motif (GXXGXXG) and lacks the YXXXK active site motif of classical and extended SDRs. Tyr-179 and Lys 147 are present in the active site, but not in the usual SDR configuration. Given these differences, it has been proposed that this subfamily represents a new SDR class. Other atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.31813e-130
NC_015556.1|WP_081470735.1|1772954_1773545_+|cysteine-hydrolase	gnl|CDD|238496	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.	2.08407e-57
NC_015556.1|WP_013790737.1|1752239_1752602_+|STAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	5.47029e-28
NC_015556.1|WP_013790741.1|1754867_1756811_+|hybrid-sensor-histidine-kinase/response-regulator	gnl|CDD|237425	PRK13557, PRK13557, histidine kinase; Provisional.	4.29678e-103
NC_015556.1|WP_013790749.1|1764187_1766713_-|PAS-domain-containing-protein	gnl|CDD|237425	PRK13557, PRK13557, histidine kinase; Provisional.	1.16386e-99
NC_015556.1|WP_013790751.1|1768859_1769495_+|LysE-family-translocator	gnl|CDD|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	3.1682e-33
NC_015556.1|WP_013790752.1|1769568_1771035_-|alanine:cation-symporter-family-protein	gnl|CDD|376500	pfam01235, Na_Ala_symp, Sodium:alanine symporter family.	0
NC_015556.1|WP_013790742.1|1757119_1759078_+|methyl-accepting-chemotaxis-protein	gnl|CDD|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.9903e-70
NC_015556.1|WP_013790750.1|1766981_1768778_+|GGDEF-and-EAL-domain-containing-protein	gnl|CDD|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.03682e-98
NC_015556.1|WP_013790744.1|1761709_1762096_-|NUDIX-domain-containing-protein	gnl|CDD|240025	cd04667, Nudix_Hydrolase_10, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	1.44456e-40
NC_015556.1|WP_013790740.1|1754002_1754878_+|two-component-sensor-histidine-kinase	gnl|CDD|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	1.37683e-56
NC_015556.1|WP_013790754.1|1772446_1772827_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	1.80143e-29

Protein sequences

>NC_015556.1|WP_013790745.1|1762314_1762719_-|DoxX-family-protein
MNHPHLQQHAHDWALLFLRISASLLLLAIHGLPKLLDLQAELGRIEDPLGLGQGITLGLALFAEVACPLLIALGLFTRLACLPILAVLGVSLVLVHPEWSLADGQFAWLLAIIFVTLLIGGAGRFALGRNLRWQ
>NC_015556.1|WP_013790744.1|1761709_1762096_-|NUDIX-domain-containing-protein
MIKTTKPRATVICQKQDKVLLVRKADAKWTLPGGKIEAHERPAEAALRELCEETGLDSTALEFLALHEFDSRPHHVFRATVPEYLAAQPQNEIADCRWFSAVDLDKAIKKSARKLLELYFAGSQGKPA
>NC_015556.1|WP_013790743.1|1759231_1761691_+|PAS-domain-containing-protein
MIADDVEALRQRLQALEAENAQLKASLAALTSDGASADQRFRQAFEQAPAAMAVLYGPELRFEYMNPAYRRLLGLDDVIGQPAREVLGSRMARRFIDLLEEAYRRGRPVRARNFEVPGRPGHQVDFSYQPQFDELGRVEGLFIQEIDIAEQRRVEHAFAQERERYEFLFNTMDEGFCVIEFFDGPHGPLSDYIHIEANPAYAEHAGIRNVVGQKLREMVGEEADSWVERYAHVLHSGEPIRFEQELIATGRHLEISAFRVGPASRKQVAVLFQDITQRKQAEESLRQLNETLEARVRDANEARRVLAGVVDGADALIFIMGFDYRWIAINGSGMREYERVFGAPPHIGEDLRQALKDQPEHLQTVIAPWQRALAGEEFEVVVPLETEQGIRHFEMHFNRLNDSDGQQIGAYQFVYDVTERLQEQERLRVVEDALRQSQKMEAVGQLTGGIAHDFNNLLTSISGSLELLQMRLGQGRLGDLERYVSAAQSAARRASSLTHRLLAFSRRQTLDPKPTNVNRLVTGMEELVRRSVGPHITTEVVLAAGLWSSFIDAPQLENALLNLCLNARDAMPHGGRLTIETANKWIDDYAARGRNVPPGQYVSLCVTDTGTGMSPEVIEHAFEPFFTTKPLGEGTGLGLSMVYGFVRQSGGQVCIYSEVGQGTTMCLYLPRLYDGSDEADAEAVETPTEETNAGRETVLIVDDEPAIRMLVSEVLEGQGYTTLEAGDGPSALKIVQSDARIDLLVTDVGLPAGMNGRQLADFARQERPELKVLFITGYAENSVIGNGHLEPGMRLLTKPFTMQAIANRIHEMIEGDQVG
>NC_015556.1|WP_013790742.1|1757119_1759078_+|methyl-accepting-chemotaxis-protein
MSFTNLLLNMSVRKKLFSGFGLVLIITLAIVWVGQSALQTTLQRIDILLGVSSIDGKLNQARQQEKNFLLRDDDQYMQQAINLADETQQQAKIAEGKMLYPETKAMMRTVQDDLQGYREKLLTLKQSTDANKTAQAAMEAAARAALERFSALETRLRKAAVEQIRSTGDQASIDVLNHANQANSMAMELLEARRQEKNFLLRKDEKYAIQLQQHFASLEQKGVVLTRTLSNPDDQADVEAAMVQLQQYSEQFGNTRKAIDGYNATEQDMTQRAREVAASSNKSLEMQLALLNSDASRAKTMLFGAAAIAFVLGVLCALVITRMIVGPLQRVVGVAKQVANGDLSADIVPDRHDELGQLMQAMQDMTLSLRDLLGRLGNGVAQLATAAEELSAVTEQTSAGVSQQRMETEQVATAMNEMTATVLDVARNAESAAEYARNADEQTQEGQQTVQQAVARIEKLAMSIEDSAHAIESLKHDSGNIGTVLDVIKGIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALARRTHESTEQIEGLISNLQSGAEKAVAMMGQSCAQAETTVHAAKQANSALSAINAAVSEIQQMNQQIATAAEQQSSVAEEINRSVSSIRDVAEQSSAATEETSAASVDLARLGADLQAQVNRFKLA
>NC_015556.1|WP_013790741.1|1754867_1756811_+|hybrid-sensor-histidine-kinase/response-regulator
MNTDSRILIVDDNAATRYALRRRLERHGYQVLEAGTGSDGLALIRSEAIDALILDVNLPDMSGFDIVRTLRSEPRTALLPVIHVSAASILTGDIVTGLEAGADAYLVHPVDPDVLLATLRTLLRVRVTEDALRASEARFREIFVNVSAPIAVLGADLAVHECNHAFAQLIDGDVAAVDLRQCFSDDQASMLDELRARLAAGERWRGSLTMQVHGEARETEWQVSPYRDSALSLVFVEDVTEHRRRERLHKAQLDDATNQLAHEVAERARTEAQLLQMQKMEALGNLTGGIAHDFNNMLTGIITSLELIQKRVGEHRLDRVQLYTDAALNSAMSAAALTHRLLAFARKQPLDNRAVDVNERIRSLEEMLVRTIGQQISLTLELNGKPSIALVDPSQLESAVLNLVINARDALPHGGHIWVNTYTAHSSGDPNLADGAYIALSVRDDGTGIEHGLIDKVFDPFFTTKPVGQGTGLGLSTIYGFARQSGGHASIRSAPGHGTEVTVMLPVSSEPLLEQGAAEQTDYRGAGEHVLIVEDVPSVRSFVAEVLEEAGYRCTQAGDVETALVHLQSEAQIDLLLTDVGLPRMNGRELAERARALRQGLPILFMTGYAEKAINREVFLSSGMELLAKPFKMNELLEKVRASLSGH
>NC_015556.1|WP_013790740.1|1754002_1754878_+|two-component-sensor-histidine-kinase
MAESETLSPAEQAALIAQLRSESAALREELEETNQGVLALYAELDNQAEELRQASDLKSRFLSYMSHEFRTPLGSILSITSLLSDELDGPLSPEQHRQVAFVSTAARELSDMVDDLLDLAKIEAGRISISPAWFDMLDLFSALRGMFRPIVDASAVDLIFEEPVGLPRLYTDDKKLAQILRNFISNSLKFTARGEVRVSASLEGTDRIRFAVSDTGIGIAPELHDALFEDFSQIDSPLQKRLRGTGLGLSLCKRFAALLGGEVGVQSEPGVGSVFFVIIPLAIAAEVADEH
>NC_015556.1|WP_013790739.1|1752999_1754010_+|SpoIIE-family-protein-phosphatase
MSISGSVAQVLPIDDDSQVGHARRTAQKLAEGQGFDASDAGRVALVATELASNLLKHAGRGELHLRVLPRSNGAGVEIVAVDRAAGFDLDACLTDGYSTGGTQGIGLGAISRQAEVFDAYADARGAVLLARFYPRSAKKPDLPFGVSQHALHGDPACGDGWHLVLGENAVSALVVDGLGHGEEAQQAAEVCTQTFAQGPFNDPLLLIDDLHRAMHGTRGGAVAIAQARLDSGQLRFVGIGNITANLISAGKSRGMASHPGIVGGQFRKAQPFDFEQVTGQLLILHSDGLQSRWNLNDYPGLAYRHPAVIAAVLHRDFCRGRDDVTVLVIALEAVHG
>NC_015556.1|WP_013790738.1|1752598_1753003_+|anti-sigma-regulatory-factor
MIVRSSGTQPIAIEQDVVLARQTTRKLATECGMRLIDLTKLVTAVSELARNTMVYGGGGDMDWQVLDDSTRVGLRLVFRDEGPGIADLKLAMTDGWTSGNGLGLGLTGAKRLVDEFELDTEPGKGTRITITRWT
>NC_015556.1|WP_013790737.1|1752239_1752602_+|STAS-domain-containing-protein
MERIPILRMGEFLLVTIQVDMHDQLALTLQEDLAELISKTSARGVLIDISALDMVDSFIGRMIGTISGLSRIMDAETMLVGMQPAVAITLVELGMTLPGVSTALDVERGMQRLRERVARR
>NC_015556.1|WP_013790736.1|1751383_1752235_+|STAS-domain-containing-protein
MAALQTGTVQAISNNQAQLLGEWRSGLEASGATRNLKEQDLQQQTSEFLQLTLAALESDSGSNIATPGWEKVRQFLERLSASRALLGHDSHQTAAFIFSLKGPLFALLQRHYRDQPEAQAQQLLDVSELFDSLAMHTIRTFQKSREAVIKRQQEELLELSTPVVKLWDGILALPMIGTLDSQRTQVVMESLLQRIVDTGSEIAIIDITGVPTVDTLVAQHLLKTVTAIRLMGADCIISGIRPQIAQTIVHLGLDLQGVSTKANLADALKLALSRLGVSLDKAV
>NC_015556.1|WP_041706297.1|1763633_1763900_+|DUF1652-domain-containing-protein
MMSILEQRQIVESAFLPLACRCTIGADDLVTLELRDPDDDHLLLNVDGIHREELASSRSISQLVLRVRQQLERLQPGMAAPQPQRSLA
>NC_015556.1|WP_013790748.1|1763920_1764175_+|hypothetical-protein
MNSESMDALWAEQRASVLAEALGISPEEVTQWVIEDYPDTDSAGPLAGHIVELSDEAPPALVEKLGGSVVRLPPLPFKQGLEGA
>NC_015556.1|WP_013790749.1|1764187_1766713_-|PAS-domain-containing-protein
MDQLTKPAPSSTERLGFLANDGEIGQLLQTLDAGNSPLGAARDWSPTLKALMGTVLPVKAQIVIFWGPQYIALYNDAYAPSIGNKHPRALGRPAVENWTELWDDLEPLLRGVRETGETFAAKDRPFYIERHGRGEAVYFDVSYSAVPEADGSVGGVLCVVNETTERVQFERRQAFLLELGQALPSIREPDQVEALVLRRLAEELAASKVFFAENLQADAALSIRQSAAVQSSGGPPLQPYDAEQNEVLLSGRTLVQPSTGDAPATLHVPVVRNGALDAVLVIEHQGLHEFSDYEIHLAEETAKLAWAWITHARAEVALRLSSTQLSAMFDQAGAGIAVCDAGMNLVRVNDHYCEIVGRSREQLLGQSLYELAEAGECASVASPCEYSLRHGRSFENTRCHSRADGSVVWVQNHVTPLLDDQHRIAGTICVCVDISERVRAEADLRELNESLEDRVATMVAQREAAVAQLHEAHKMEMVGQLTGGIAHDFNNLLTPIMASLELIRRRLPDERFTKLADGALQAADRARILVGRLLTFARRQTLKPQPVALSTLIRNMRDLIQRSLGPMIELRIDIPERMPTVFIDPHQLELAVLNLAVNARDAMGENGRLSIAAELSEVSSETITGLSGGQYARLTISDSGCGMDEETLRRCTEPFYSTKGVGKGTGLGLSMVQGLLVQSGGGFAIDSMRGQGTRVSLWLPTTDAPVMSEKPERDEEVPRAARPTHILLVDDEALVRDTTALQLHDLGYEVTEVDSAAAALKLIDEGLRPDALVTDHIMENKTGAQLAQELRQRFPDLPVLIITGYANLTPTQISSFEVLAKPFRRRDLADRLAQLLAADPS
>NC_015556.1|WP_013790750.1|1766981_1768778_+|GGDEF-and-EAL-domain-containing-protein
MLAPYPPLPLNEQSRQRLIDAHPCFVESNSDAFLDEVVKIAALYFNTPICLITIVERNRQWFRARFGVDRPETPRADSFCAYSVATGESVEVCDALEDERFRYNNLVTGEPGIRYYAGVPLVLEGGLVLGNLCVIDTQPRPPMSAADMAMLQQIARLAITRLDEMRTAAFVDGTTGLFNHAKLDEDISDAIERGESRLAVAIELVSPAQLNDMLKSLGFQFLTDFTLAVKNTLRSLLPASWELYKISTLRFACAVPGDQLEQAQAVFATLVEAFSKPIHCQELPVLPQIGIGVLRLEPEQVPDDWLRLIVCAADEARRSQKGWAHYDEQMDAAQQRSTRLLNDLADAVRADDQLRLVFQPRVDLHSGECLSVEALLRWTHPTLGDISPAEFIPLAEKTPLIHAVSFWVLNQAVAQIDTWRRAGVDLKVAINVSAEDLNNDHLTDEIVRLLARNELDGSCLEVEFTESALIGDFSVVITQIERLKAMGVEIAIDDFGSGYSNWSYLRDIPANTVKLDRSFMDDLQPGKKDWNIVRALISLARELGQRVVAEGIETEHTLKVIRDWGCQEAQGFYISRPLEAGDLLAWLDQQVAGSSELA
>NC_015556.1|WP_013790751.1|1768859_1769495_+|LysE-family-translocator
MALHLWFTFFLAYLATTLTPGPNVLLVVRNALRHGPRAMGATLLGNLTAQLLVTTGVALGVGALLIAMPTAFLALKIIGAGYLIYLGLRQLFARQAAVATSVTEPSAAVVVAGWRIAGEAFLVSASNPKTMIFLCAFLPQFLQPERSVALQFTVMYLTIAAIVMVVHSVYCFAAFRFSKRLKAMRWVATFKRLTGALFIGLGVRLLSVRAA
>NC_015556.1|WP_013790752.1|1769568_1771035_-|alanine:cation-symporter-family-protein
MSALLDAFSGLLWTYLAIPMLLLSGLYLTYVCRGVQLRMIPEMFRVILERNHGDKEAISSFKAFTISAASRVGTGNIAGVATAIAVGGPGAVFWMWMVALVGGATSFVESTLGQLYKSDKQYRYHGGPAYYIQRALGWRWLAVVFAVMISITYGLVFNSVQANSIVDAMQTSFGGEGGSRELAWGVGVALTVLTGVIIFGGVQTISKVSVTVVPAMALMYLGIGLLVILLNIDQVPRVFSDIFSHAFGLREIAGGGIGAAIMMGVRRGLFSNEAGMGSVPNASATASVSHPVKQGLVQTLGVYFDTLVICTMTALIILVADPSHAYGDATQGASLTQWALAEQLGSWALHYLTFAILLFAFTSVIGNYYYGESNIQYMFDSKLLLNLFRVLVMAFVLIGSVVKVSVVWAMADVFMPLLALTNLIAILPLAAIAARLLSHYNAQRRKGVEPVFHRDEMPDLKNVECWDGSDHVTCAETYSESASKALKN
>NC_015556.1|WP_013790753.1|1771297_1772359_-|SDR-family-oxidoreductase
MAHHALVVGASGIVGSATARLLVQQGWQVTGLARKPGTAENVTPLAADLLDPASLAGALEDLKPTHVFLTTWARQATEAENIRVNAAMVRNLLDALRPAGSVKHVALVTGLKHYLGPFEAYGKGVLPQTPFREEQGRLDVENFYYAQEDEVFAAAERDGFTWSVHRPHTVTGVAVGNAMNMATTLAVYASICKETGRPFRFPGSAVQWNSLTDMTDARQLAKQLHWASTTPAAANQAFNIVNGDVFRWKWMWQRIAEWFGLEAAPFDGEPAPLEEQMAGDAAAWLELVAKHDLAEADITRLISPWHTDADLGRPIEVVTDMSKSRKLGFLDYQATDDAFFSVFERLRVAKLIP
>NC_015556.1|WP_013790754.1|1772446_1772827_+|helix-turn-helix-transcriptional-regulator
MQPGTPDEQWREDCAPRRVLELFATKWTSMILHTLHARHGGTARTGVLHRSLPGISKKMLVQTLRELEASGLIDRQVHDSVPPTVDYSLTELGQRLVEPIELIYGWARDNAPALDALQPRQTSRRR
>NC_015556.1|WP_081470735.1|1772954_1773545_+|cysteine-hydrolase
MAQRTHHLPPAASDLGVQCLKALIVIDVQEGLFGPEPKPAFSSDIIARINTLTQRARQHGVPVIFVQHEATTGEHFTYGSEAWQLASGLATHERDSFVRKTTPDSFLRTDLEVVLKQAGVSQVIVCGYATEFCVDTTVRRAAGLGFEVILISDAHTTHDKPHASAADIIAHHTATLPSIRSFGVQISAQESTAVVF
>NC_015556.1|WP_013790756.1|1773560_1775006_-|SulP-family-inorganic-anion-transporter
MKIARLRADILAGLTSSFALVPECIAFALVAQVNPLMGLYGAFFICLITALFGGRPGMISGAAGSMAVVIVALVVQHGVEYLLATVLLSGLIMTAFGLLRLGKLVRMVPHPVMLGFVNGLAIVIALAQLEHFQHDGRWIEGKALYLMLGLVALTMAIVYILPRLTKVIPPALAAILSVGLLTYFLHLPTHTLGDMAKIAGNMPVPALPQIPWSLETLKIILPYAVLMAMVGLLETLLTLNLTDEITESRGHPDRECVALGAANIASGMCGGMGGCAMIGQTMINLSSGGRGRLSGVVAGGMILLYILFLSPLIELIPLAALVGVMFVVAQQTFAWASLRVLGKVPLNDVLVIVAVTIITVFTDLAVAVSCGIVIAALNFAWQHARDLHAETHLEADGSKRYVPWGTLFFASTTQFLNQFDTANDPEHVTIDCRHLSFVDYSAIAALMTLRERYTKAGKHLRVVHLSERCKQLLKRAGMQAG

Crispr_ID: NC_015556_3

• CRISPR_ID: NC_015556_3
• CRISPR_location: 2328245-2328512
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NC_015556_3

Consensus_repeat	Method
CGGTGGCCTGGTCGGCTACAACGAG	CRISPRCasFinder

spacers of NC_015556_3

>3.1|2328270|56|NC_015556|CRISPRCasFinder
CGCGGCGTTCTTGCCCAGAGCTATGCCACCGGCTTCGTGGCCGGCACCGATTTCGC
>3.2|2328351|56|NC_015556|CRISPRCasFinder
GCTGGCAGCATCAACGCGGCCTACGCCACGGGCCAGGTGATCGGCACCCAGCATCT
>3.3|2328432|56|NC_015556|CRISPRCasFinder
AGCGGCACCATCAACGCCAGCTACGCCACCGGCGACGTGGGCGGCAGCACTGCGGT

CRISPR arrays and Neighbor proteins around NC_015556_3

CRISPR arrays

The CRISPR arrays of NC_015556_3

>merge|NC_015556|3|2328245-2328512|CRISPRCasFinder
CGGCGGGCTTGTCGGGTACAACAACCGCGGCGTTCTTGCCCAGAGCTATGCCACCGGCTTCGTGGCCGGCACCGATTTCGCCGGTGGCCTGGTCGGCTACAACGAGGCTGGCAGCATCAACGCGGCCTACGCCACGGGCCAGGTGATCGGCACCCAGCATCTCGGCGGCCTGGTCGGCTACAACGAGAGCGGCACCATCAACGCCAGCTACGCCACCGGCGACGTGGGCGGCAGCACTGCGGTCGGCGGTCTGGTCGGCACCAACGAC

>NC_015556|3|3|2328245-2328512|CRISPRCasFinder
CGGCGGGCTTGTCGGGTACAACAAC	CGCGGCGTTCTTGCCCAGAGCTATGCCACCGGCTTCGTGGCCGGCACCGATTTCGC
CGGTGGCCTGGTCGGCTACAACGAG	GCTGGCAGCATCAACGCGGCCTACGCCACGGGCCAGGTGATCGGCACCCAGCATCT
CGGCGGCCTGGTCGGCTACAACGAG	AGCGGCACCATCAACGCCAGCTACGCCACCGGCGACGTGGGCGGCAGCACTGCGGT
CGGCGGTCTGGTCGGCACCAACGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_015556.1|WP_081470738.1|2309773_2310289_+|TonB-dependent-receptor	unknown	unknown	gnl|CDD|236643
NC_015556.1|WP_157139386.1|2312232_2315037_-|ATP-binding-protein	unknown	unknown	gnl|CDD|237603
NC_015556.1|WP_013791274.1|2315747_2316977_-|His-Xaa-Ser-system-radical-SAM-maturase-HxsC	unknown	unknown	gnl|CDD|274895
NC_015556.1|WP_013791283.1|2331220_2331571_-|hypothetical-protein	unknown	unknown	unknown
NC_015556.1|WP_013791288.1|2336830_2337052_+|hypothetical-protein	unknown	unknown	unknown
NC_015556.1|WP_013791281.1|2329022_2330675_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl|CDD|225387
NC_015556.1|WP_157139387.1|2337338_2340221_+|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|237425
NC_015556.1|WP_013791287.1|2334485_2336447_+|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl|CDD|223910
NC_015556.1|WP_013791270.1|2310785_2311055_-|hypothetical-protein	unknown	unknown	unknown
NC_015556.1|WP_041705923.1|2316979_2318470_-|His-Xaa-Ser-system-radical-SAM-maturase-HxsB	unknown	unknown	gnl|CDD|274896
NC_015556.1|WP_013791273.1|2315124_2315751_-|His-Xaa-Ser-repeat-protein-HxsA	unknown	unknown	gnl|CDD|274897
NC_015556.1|WP_081470770.1|2319088_2319457_+|hypothetical-protein	unknown	unknown	unknown
NC_015556.1|WP_013791282.1|2330979_2331213_+|hypothetical-protein	unknown	unknown	unknown
NC_015556.1|WP_013791276.1|2318471_2318774_-|His-Xaa-Ser-system-protein-HxsD	unknown	unknown	gnl|CDD|274894
NC_015556.1|WP_013791279.1|2320627_2323894_-|DNA-helicase	unknown	unknown	gnl|CDD|224037
NC_015556.1|WP_013791285.1|2332175_2332535_-|hypothetical-protein	unknown	unknown	gnl|CDD|320084
NC_015556.1|WP_081470739.1|2311475_2311661_-|hypothetical-protein	unknown	unknown	unknown
NC_015556.1|WP_013791286.1|2332682_2333666_+|deoxyribonuclease-I	unknown	unknown	gnl|CDD|185091
NC_015556.1|WP_013791290.1|2340604_2341327_-|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223736
NC_015556.1|WP_013791284.1|2331651_2331936_-|Arc-family-DNA-binding-protein	unknown	unknown	gnl|CDD|367702

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_015556.1|WP_081470738.1|2309773_2310289_+|TonB-dependent-receptor	gnl|CDD|236643	PRK10044, PRK10044, ferrichrome outer membrane transporter; Provisional.	1.38646e-31
NC_015556.1|WP_157139386.1|2312232_2315037_-|ATP-binding-protein	gnl|CDD|237603	PRK14083, PRK14083, HSP90 family protein; Provisional.	3.51344e-09
NC_015556.1|WP_013791274.1|2315747_2316977_-|His-Xaa-Ser-system-radical-SAM-maturase-HxsC	gnl|CDD|274895	TIGR03977, radical_SAM_domain_protein, His-Xaa-Ser system radical SAM maturase HxsC. This model describes the downstream member, HxsC, of a pair of uncharacterized radical SAM proteins, regularly found in the context of a small protein with four or more repeats of the tripeptide His-Xaa-Ser (HXS). This enzyme appears to be part of a peptide modification system.	4.51733e-151
NC_015556.1|WP_157139387.1|2337338_2340221_+|PAS-domain-containing-protein	gnl|CDD|237425	PRK13557, PRK13557, histidine kinase; Provisional.	2.50187e-125
NC_015556.1|WP_013791287.1|2334485_2336447_+|methyl-accepting-chemotaxis-protein	gnl|CDD|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.21316e-70
NC_015556.1|WP_041705923.1|2316979_2318470_-|His-Xaa-Ser-system-radical-SAM-maturase-HxsB	gnl|CDD|274896	TIGR03978, paired_radical_SAM_protein_1, His-Xaa-Ser system radical SAM maturase HxsB. This model describes the upstream member, HxsB, of a pair of uncharacterized radical SAM proteins, regularly found in the context of a small protein with four or more repeats of the tripeptide His-Xaa-Ser (HXS). This enzyme appears to be part of a peptide modification system.	0
NC_015556.1|WP_013791273.1|2315124_2315751_-|His-Xaa-Ser-repeat-protein-HxsA	gnl|CDD|274897	TIGR03979, His_Ser_Rich, His-Xaa-Ser repeat protein HxsA. Members of this protein share two defining regions. One is a histidine/serine-rich cluster, typically H-R-S-H-S-S-H-R-S-H-S-S-H. Members are found always in the context of a pair of radical SAM proteins, HxsB and HxsC, and a fourth protein HxsD. The system is predicted to perform peptide modifications, likely in the His-Xaa-Ser region, to produce some uncharacterized natural product.	5.42737e-40
NC_015556.1|WP_013791281.1|2329022_2330675_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl|CDD|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	4.56327e-120
NC_015556.1|WP_013791284.1|2331651_2331936_-|Arc-family-DNA-binding-protein	gnl|CDD|367702	pfam03869, Arc, Arc-like DNA binding domain. Arc repressor act by he cooperative binding of two Arc repressor dimers to a 21-base-pair operator site. Each Arc dimer uses an antiparallel beta-sheet to recognize bases in the major groove.	1.94966e-06
NC_015556.1|WP_013791276.1|2318471_2318774_-|His-Xaa-Ser-system-protein-HxsD	gnl|CDD|274894	TIGR03976, hypothetical_protein, His-Xaa-Ser system protein HxsD. This rare conserved hypothetical protein of small size occurs exclusively, and perhaps universally, in the context of a pair of (uncharacterized) radical SAM proteins, TIGR03977 and TIGR03978. Many members of this family have invariant motifs LYW and LLNDYxLRE, but PSI-BLAST starting from family members well below 20 % pairwise sequence identity to this group eventually brings in the entire family as modeled here. The family TIGR03979 represents the fourth regularly conserved member of this system.	1.71923e-12
NC_015556.1|WP_013791279.1|2320627_2323894_-|DNA-helicase	gnl|CDD|224037	COG1112, COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair].	1.24854e-25
NC_015556.1|WP_013791285.1|2332175_2332535_-|hypothetical-protein	gnl|CDD|320084	cd16170, MvaT_DBD, DNA-binding domain of the bacterial xenogeneic silencer MvaT. MvaT is a xenogeneic silencer conserved in Pseudomonas which assists in distinguishing foreign from self DNA. It prefers binding to flexible DNA segments with multiple TpA steps, and forms nucleoprotein filaments through cooperative polymerization.	1.31199e-16
NC_015556.1|WP_013791286.1|2332682_2333666_+|deoxyribonuclease-I	gnl|CDD|185091	PRK15137, PRK15137, DNA-specific endonuclease I; Provisional.	3.41634e-94
NC_015556.1|WP_013791290.1|2340604_2341327_-|Crp/Fnr-family-transcriptional-regulator	gnl|CDD|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.18469e-27

Protein sequences

>NC_015556.1|WP_013791279.1|2320627_2323894_-|DNA-helicase
MTQASIVRYWHAVELLQPQAAPAIKKRDNNYEAFYHDISAATPITPWAANSAVARQAIRKDRVWSHTLFGHLYDSRDVARKLEELYGADEGYKEPQKRDSALFSIKFDASGHMIDDSLVLSSEAWFLGKAMSDKDWTRGFDDDQDTVRAKAKENLGGEVLDSGLIRLTNFIRKFLGLEDFFGPLSERSHRVRSMPINPRRPEQEDDPLNSFIMNDLADVGDRLAKGITSAPLDGYLSAHDLSKRLHISEDQNSESLIERLSPAHYSKGCWPAEGNLGLVHSQQLAVNTILTQLADSEGLLGVNGPPGTGKTTLLRDLIAAIVTQRADVLATFKRPSEAFLTDGLERANNGGKEQRSYKLNPKLYGYEIVVASSNNGAVENVTLELPQRDKIDKNWLDDADYFSELGELVTGKPAWGLISSALGSKAKRSQFVGRFFYGNRPGAGTEEAEPAITETSFEEIDGQALKEETAPDSGGAETQPEVTKRPQGFKAWLDEQIGLSGIADQRQRSWTSAVEDYKAAIRIADELSAGAAKISQIIQAIRKATHEVSQKEEALKQQVQKHAAVEAELADLQQRSLPVARNNLDQSSQALQNHRNSKPSFWANLLSLGGAYRQWLALLAPLQHQSALAEAAYKPLETMAARLRAEKMAQEKLSKNRHEELKHLREHAKLQFDKAKSLAIACQATHLLTWLETGVIGRGAQIELAEPWIIKDWRQARAKVFLKALQLHRTFFQIEAKRIQANLRFITDMLGGGRYSGISRDAIRSVWASLFMVVPVLSSTFASFARSFGSLEAGEIGWLLVDEAGQATPQAAVGALWRARRAVLVGDPLQLPPIISVSDATLEHMRKRFGVSTHWLPNRQSAQTLADQATPWGDLIGPQNSKSWVGLPLVVHRRCDRPMFDLANRIAYDGAMVYGTKAPSPEKETKAKLLTGWIHAAGMSTGNWVEAEGNALQQLLDGLKADGVPDSDISVITPFQDVRRRLKTMLPEKMTRGTIHTMQGKEAPVVIMVLGGNSSSPGARNWVVSTPNLLNVAVTRAKRRFYVIGDINDWPQRALFCEVMDLLPIQLPVEPLPSDLNLLINLQTRGTS
>NC_015556.1|WP_081470770.1|2319088_2319457_+|hypothetical-protein
MFQYEGSDLLVWGGWKTVAGYVAPGTNAVEIQCRKDRKVCSEAFASVHQHSEGQDLEASTYEYLVTDWTDNGIEAIAENGMGSCLDRVLRIGFQPESATVQWRPGAGCEGSEGHAVLIGDPL
>NC_015556.1|WP_013791276.1|2318471_2318774_-|His-Xaa-Ser-system-protein-HxsD
MVWTQIIVIDESAYPLNVAQKAAYALAATVSILITRQDGCLHLTVTPADLRIDAPHLSESQARVLITRSLNDFALRQQIQLETSGLRELLAGVALREAGV
>NC_015556.1|WP_041705923.1|2316979_2318470_-|His-Xaa-Ser-system-radical-SAM-maturase-HxsB
MTAAILAREVGYKLLPFRFLRLDDTSPNNLLITAETGEYLFVSEQQLRQLVGKQLERGTPLYKDLLARHFIYEPHRHNPIAEIAAQYRSRKEFLFGGPALHLFVVTLRCNHTCQYCQVSRAPLGGSGHDMSPEHASHAVNRLFESPSPVLTVEFQGGEPLLAFDRIRQIVEEIAERNEHEKRSIQFVISSTLHHLTDEILDFAKTHSIQFSTSLDGPAFLHNANRPTPGKDAYERTLKGIQWVRERLGSDAVSALTTLTAKSLQHPYAIIDEYVLQGFNSIALRPLSPYGFAKKSSQRLDYSMAEYIDFYKTSLAYLIEINQQGAYLSEGYTSLLLNNVLTPFSSGYVDLRSPVGAGVGTLLYNYDGDVYPSDEARMLLEMGEDGLKLGHVAQPLQELLGSPVIDLLLSAGVAEALPGCSDCALVPYCGADPIEHFARQGDPIGHRAFSTFCQKNSELLTHLFRLLRDGDDDTQRVLLSWLARRSLGDLPVAGYRG
>NC_015556.1|WP_013791274.1|2315747_2316977_-|His-Xaa-Ser-system-radical-SAM-maturase-HxsC
MLRLDTQFDIHNLPCTRLFKVITPEELIEKGTAVCAGDASVSDFALWLEEPESDYSKQLLALPVGCLLLPTSDTAAEGFEGTQLVHPNDSTIVQPGDVIVVSPGSRVVRVLYRRGSNSNLLFMTDRCNSLCLMCSQPPKDIDDLWHVEENLRLIDLMDPGKEQIGISGGEPTLYREGLLEIIAKAKGVIPEKSLHLLSNGRLQSDPSWISALKAVAHPQLTWGIPLYADNADDHDHVVQAPGAFSETLRGLYNLARANQRIEIRVVLSKLTAPRLPELAHFIFRNMPFVQHVALMGIENMGLAKKHYHELWIDPLDYQQELNQAAHFLDIRGLPVSVYNLPLCVLEPSLYPFYRQSISDWKNLFIEACQGCAAVTQCAGFFKSHSSRWQSRGIHPITATELGTYARRAL
>NC_015556.1|WP_013791273.1|2315124_2315751_-|His-Xaa-Ser-repeat-protein-HxsA
MKLIGRWKLLIGQAVAMLPVVATSMAHANQAALAGVDWTPQTTDEPPVFKNTLNSVDAVNIYAAHRSHSSHRSHSSHRSHYSGSGGGYSAPRAYTPPPAPAPRTTYSAPSSSTPSYGSSSNLSGSSRSSVPSTQVSPQRARPASEDLSLMIMRVQMALTVKKYYTGGIDGLMGNGTRGALMAFQMDSGLPVSGKMDTQTLNALGVAIP
>NC_015556.1|WP_157139386.1|2312232_2315037_-|ATP-binding-protein
MVHIISLEDHFKEICNKHPHLKLLESQWRFDEELIAKALQNVSSLFPHYSRHDASHSRQIIVNIERMLGEKIKFLSATDTWLILEAAYNHDIGMVVTQKQLSDINSEEFKSYLKEIIDQPDNPLHSFAKDWENNKAILPTGSESHSFLNRYIQLIAEWYRKKHPENSAKIVVNPVDEIGLNSPRNELLPKRLFGALSKVCQAHGQGFSEVMKLPFSEAGMASEDCHPRYVACLLRMADLLDLDDNRFCPVMLHMCGERLPETSKAHLDKHHSIKHFRLDSERIEAESECPSPEAYEVAFEWFKWLETEYHQQTQNWDKIVPSKKLGNLPTLTTPSVKIKEPFLILEQGKKPNFRVDQKAILDLVRSTGLYTSKFESIREALQNAVDATLIAIWQMHKSEILYLDPTHPRMREIFDQYPITVEIEETPNNEKFILLRITDQGTGIDFETLKYMLEVGASYKNRSKRSIVEEMPVWYRPSGNFGIGLQSSYLISNKFTIKSKSRLTHEALKLSFSQKSEKSIVIKKISSQSMGYGTTLEMKIKIKKFPQSMQFGFSDDSLLAQRLNEYDFTKPGASLRCYEIIKIYESIAKFNQESPIKINHSSIKPHVSKKSYFCKKSNIVLTNLNFNNTEHSILETFFRGQEFQGFSYYFHCMRASIDFYGHSAKDFLTYNREKILPHAARKAHGEIITAALSYIDNNELSEEQKPYAAAFCQIYANAVPPKLERYLPRYEVQFTDGSTKTLEKLTAEIKSGDCKFISTPGHETTIETSSSILAKNKVAPALDLIIHFVLESGFHYQISGHSSPFKGESYKWSAQSIEPLSEDLFKDLLLQKYGINHGVGNRVLFPCWGQYKKLAIKAKISWAKVFSPTRNKNEFMVLPCHFLNIGQPPVFHDNEELARWTYKNRKYDESSEAEILTLYNDLSLRLKNLIGAGR
>NC_015556.1|WP_081470739.1|2311475_2311661_-|hypothetical-protein
MIQHNATRGLIEHICQCAASLGFDGIFGHEVDRHSHSTKTLARPWLAIFNRSAISAPNWLD
>NC_015556.1|WP_013791270.1|2310785_2311055_-|hypothetical-protein
MAEFESCVVPFPLQRSPLHESERSPLPSEAAAETRAVMLGHLLDQLAEPEGVPPDDLRVRIAAYSALDLLDEMVVLYRRALSEVRGGAA
>NC_015556.1|WP_081470738.1|2309773_2310289_+|TonB-dependent-receptor
MSVKGRTSGIYNAEYVGRSRAKGMELEVSSDLKDNLNLTSAYTYTDSRITNDGPGSLLEGASGYGVPRNQASIWANYRFLDGGLRGLRIGGGVRHFDSTFAYTSPSLYGKLDTGDVTLVDAAVGYSIDEQWSAGLNARNLLKEEYVAGCNDAGRCYWVEERTLLATLTFNW
>NC_015556.1|WP_013791281.1|2329022_2330675_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MRFVHPLVGSALTLLSLSVMAATAPDAGQSQQNLDQRPLQLPGKQRLELNLPDAPSTEAKPGGPSLQINRFTLQGNSAITSEELLPLLADLQNRTVSLGELQAGANRITALYRERGYPLARAYIPAQEIEGGVVQIAVMEGRYGEIALNNTSRVSDVALAPIKQLKSGDAVRSAPLERSLLLLSDTPGVEVKSTLKPGASVGATDLLVDVQPGPLLSGSIDADNYGNRFTGEYRLGGTLNVNSPLGLGDRLSLRAMGSNEDQQYGRIAYQLPIGPWATQVGVAYSDMDYQLAKDFDDLDAHGNARITSAYAIQPLVRSRDLSLYAQLQYDDKRLKDDIDLFDSKSDKRSRVVTTSLNGESRDQLFGGGINSFALAWSQGSLTIDGAANQRFDDLSAGTQGRFHKLNPSLVRLQRLSDRFSLYSQLQGQWADGNLDSSEKISLGGAYGVRAYPQGEASGDQGWLANLELRYALTDTWQLSTFVDHGEVRLNKDTWSDGDNHRSLSGAGVGARWAASGWQISATSAWKLGNADPQSDVDRSPRVWVQAVRFF
>NC_015556.1|WP_013791282.1|2330979_2331213_+|hypothetical-protein
MVIAASAFAVINEPITAQKIARDTGVDLGLIKAWVTHARFYEDGSGYLVFFKADTPGEVREQIPRLTATNLLIVLAA
>NC_015556.1|WP_013791283.1|2331220_2331571_-|hypothetical-protein
MQYEVLPLFERGKRKPNKAFSSAPRISACVQMNKSLQSPMAREATVARAYTGPGISELPELYDARVENIAVLAFTIEGVEFIDGQMYQQVWHCRMPENKIQVPWTLCPRGPLDELL
>NC_015556.1|WP_013791284.1|2331651_2331936_-|Arc-family-DNA-binding-protein
MQKPGSTSRTADKFVIRLPDGMRKAIEELATTNHSSMNTEMVLALEAHLESQSRQKLLLDTLQAQVSDAKVPAREQPQQQAEVDYIDGLKKDTH
>NC_015556.1|WP_013791285.1|2332175_2332535_-|hypothetical-protein
MSKIAEFKALEAQIAEHKKRLEALQGDAGLKKEIEFESKLRKLLGEYSYSLRDVIAVLDPEAGKTQKSAAAKPARRERTLKRYKNPKTGEVLETKGGNNKQLRAWKEEHGAETVESWVQ
>NC_015556.1|WP_013791286.1|2332682_2333666_+|deoxyribonuclease-I
MKPVLSFFALLLCVVTPSFASAPGTFTEAKVIAKREVFFDQADGPEGELYCGCKWQWVGKSGGRVDAESCGYEVRKQPNRAERTEWEHIVPAWTFGHQRQCWQNGGRKNCVATDPVFRAMEADLYNLYPSVGEVNGDRANFNYGMASSIAPQYGQCSTRIDFGARTAEPRDEVKGLVARTTFYMFDRYNLNMSRQQQQILMAWSKQHPVTAWELERNARIAKIVGYPNKFVTGERTWVLGYKPKGEGVVTLNTSKAASQQVARAQEPSKNTQAAVANGEVIGNRRSGVYHLPAGCPSYGQVSAKNQVSFGSEAEAIASGFHKAGNCR
>NC_015556.1|WP_013791287.1|2334485_2336447_+|methyl-accepting-chemotaxis-protein
MLKNAPLSAKLLLILMFPLAGFLAFAGIFVAHKLETVGAMDRAVAATSAAKNMSDVVTTIQRERGASGVFLGSGGKTMQDKLRSLRQETDKAITVMRAQPTEDLPAPEAMLRAMDDLTALRQKVDSLAINNTESGAQFTDLIGKLIGFSYSLETTIEDPEILRALSSLNQFFDMKERSGRERVLLGLAFNQNRFDAPLLSRFSRNMGEFSGYFEAFQRWAPEEFKNKLDAVLQQPASVEVARLQKLGFDTPLGNPLNINPEEWFNLSTSRIDMMAKVESELAQVVVGLANIERSNAQQSLYLAMATVIVMLVAVLWLAWTIIHNIKIAVVDLNRTLISLSKRDLTARTSYTGKDEFGEISRNLDNMALHISEVISEIGGATAQVATAAEQSSAVALQTSNNVAQQRQGTDQVVTAISEMSSTVKDVARSINDAAEMSQRVNVSTVQGKAEIEKTIGLIKGLEVQAHETSQIIDELKGESDSISSVLDVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAKKTQDSTVSIQNMIANLQSGSERASNSMQETLGKAQEGATNIVRAGELLEEIAEGIANISDSNIQVASAAEQQSQVAEEIHRNVTEINTLVIQVSAGAEQTAITSRELARLAEQQQGLVGRFRVS
>NC_015556.1|WP_013791288.1|2336830_2337052_+|hypothetical-protein
MAAPSQNRQKQGTLDRNGIIHVSAEGLAITCYDKEGHTLVNLRLSNLQLRNETLIAAAIHHLYGKVRDAEPSE
>NC_015556.1|WP_157139387.1|2337338_2340221_+|PAS-domain-containing-protein
MREALKAYGAQPETLDESNRKAQAASAQNAARQKAVFDSAVDLAIILTDPAGTITGWNSAAVHVMGWSAEEMFGQSVARIYIAQDRDDGLVEAEMQRALELGYASNERWHLRKDGQSIWVSGETLPLYSEKQTHLGFMTILRDRTKEYVDNRAMEETKERYRLAAKATNDAIWDWDLTANHVLWNDALADAYGHSLAALESTGDWWLQQIHPDDRDRIYNSIHAVIDGEGSSWSDEYRFYRHDGSYAEVLDRGHVIRGSDGKALRMIGAMLDLTSRRKSETALRKSEERFRTIMETIETAFAIVEVKFDAQDNPVDYRFIEVNPAFERESGVNLLGKWVTEYAPELEQFWFDTYGHVAKTREPLTFESYANTFERWFDVKAVPVGDPSERQLGVFFNDVTARRNAQERLQASEALARQNIERVQLALAAGAIIGTWHWHVLTDRFTVDKAFAEAFGLDPALGFKGLSLEQIIATVHPDDREGVIAAIDDVFARGGAFSHQYRVKRTDGKYYWIEANGRVELADDGTALNFPGVLIDVEERRALMDERDRATAALRSLNDTLEQRVAERTADLMKAEEKLRQSQKMEAVGQLTGGLAHDFNNLLAGISGSLEMMAVRIAQGRVAELEKYILTAQGASRRAAALTHRLLAFSRRQTLDPRPTDVNTLLEGMAELIQRTVGPSITLETVGATDIWPVKVDASQLENALLNLCINARDAMPSGGRIKIETANRWMDREVARTHDLTEGQYLALSVTDTGVGMTPEVIAKAFDPFFTTKPIGHGTGLGLSMIYGFAKQSGGQARIRSEVGVGTTLTLYLPRYFGSVDAAREELYSSAVELSERGETILVVDDEPTIRILLVEALSERGYSVIEAADSVAGLKVLRSDVHIDLLISDVGLPGGMNGRQMADAGRELRPGLKTLFITGYAANAAIGDGHLQPGMQVITKPFSVDSLITRVQELIDAE
>NC_015556.1|WP_013791290.1|2340604_2341327_-|Crp/Fnr-family-transcriptional-regulator
MPDDYMPQQNHLLAALPGEVQQRLFSHLEHVSLPLGQVLYESGESVRHVYFPTDSIVSLLNVMENGACAEIAVVGNEGLVGISLFMGGESTPSRAVVQSGGYAYRLPAPRLKEEFNRHGEFLVLMLRYTQALITQMSQTAVCNRHHSIDQQLCRWLLLSLDRLPGNQLTMTQELIANMLGVRREGVTEAAGKLQRQGVIKYSRGHITVLNRKQLEQLSCECYAVVKRETDRLLSYMSLHS

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_015556_1	1.15|347036|32|NC_015556|PILER-CR	347036-347067	32	MH617115	Siphoviridae sp. isolate ctjh_2, complete genome	35019-35050	1	0.969
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP035709	Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt12, complete sequence	72503-72534	3	0.906
NC_015556_1	1.2|347036|36|NC_015556|CRT	347036-347071	36	MH617115	Siphoviridae sp. isolate ctjh_2, complete genome	35015-35050	5	0.861
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP005192	Sphingobium sp. MI1205 plasmid pMI3, complete sequence	55044-55075	5	0.844
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	AB244976	Uncultured bacterium plasmid pLB1 DNA, complete sequence	31209-31240	5	0.844
NC_015556_1	1.3|347096|36|NC_015556|CRT	347096-347131	36	NZ_CP035709	Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt12, complete sequence	72503-72538	6	0.833
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP010057	Hymenobacter sp. DG25B plasmid, complete sequence	6033-6064	6	0.812
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP017947	Bosea sp. Tri-49 plasmid unnamed1, complete sequence	160892-160923	6	0.812
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NC_020548	Azoarcus sp. KH32C plasmid pAZKH, complete sequence	614682-614713	6	0.812
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP028965	Burkholderia sp. IDO3 plasmid p1, complete sequence	397699-397730	6	0.812
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP013426	Burkholderia sp. MSMB0856 plasmid pMSMB0856, complete sequence	18153-18184	6	0.812
NC_015556_1	1.3|347096|36|NC_015556|CRT	347096-347131	36	NZ_CP010057	Hymenobacter sp. DG25B plasmid, complete sequence	6033-6068	7	0.806
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	152382-152413	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1740491-1740522	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1522184-1522215	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1127492-1127523	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1544355-1544386	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	972205-972236	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	990999-991030	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1166554-1166585	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	904505-904536	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1319516-1319547	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	890422-890453	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1722976-1723007	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	136038-136069	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	978038-978069	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	696000-696031	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	804557-804588	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1267601-1267632	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	186196-186227	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	899634-899665	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	978027-978058	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1267568-1267599	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	969210-969241	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1012152-1012183	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1266373-1266404	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	991045-991076	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	969210-969241	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1012152-1012183	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1266410-1266441	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	969210-969241	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	969214-969245	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1012152-1012183	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1012152-1012183	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1012152-1012183	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1266410-1266441	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1062837-1062868	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1266399-1266430	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	903935-903966	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	884618-884649	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	932563-932594	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	978713-978744	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1173008-1173039	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1266399-1266430	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	969210-969241	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1195131-1195162	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1267566-1267597	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1266410-1266441	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1012154-1012185	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1087758-1087789	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1266421-1266452	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1266399-1266430	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1087758-1087789	7	0.781
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP003425	Serratia sp. SCBI plasmid SCBI_Pl, complete sequence	2703-2734	7	0.781
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	KT001914	Caulobacter phage Seuss, complete genome	80090-80121	7	0.781
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP021026	Rhizobium sp. TAL182 plasmid pRetTAL182b, complete sequence	266711-266742	7	0.781
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP013597	Rhizobium sp. N741 plasmid pRspN741b, complete sequence	300790-300821	7	0.781
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP013501	Rhizobium esperanzae strain N561 plasmid pRspN561a, complete sequence	301156-301187	7	0.781
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP013507	Rhizobium sp. N1341 plasmid pRspN1341b, complete sequence	300790-300821	7	0.781
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP013518	Rhizobium sp. N113 plasmid pRspN113a, complete sequence	301156-301187	7	0.781
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP013491	Rhizobium sp. N6212 plasmid pRspN6212a, complete sequence	301159-301190	7	0.781
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP013496	Rhizobium sp. N621 plasmid pRspN621a, complete sequence	301159-301190	7	0.781
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP013591	Rhizobium sp. N871 plasmid pRspN871a, complete sequence	301159-301190	7	0.781
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NC_020548	Azoarcus sp. KH32C plasmid pAZKH, complete sequence	656852-656883	7	0.781
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	571572-571603	7	0.781
NC_015556_1	1.21|347396|32|NC_015556|PILER-CR	347396-347427	32	NZ_CP036351	Planctomycetes bacterium K2D plasmid pK2D_1, complete sequence	40406-40437	7	0.781
NC_015556_1	1.21|347396|32|NC_015556|PILER-CR	347396-347427	32	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	19392-19423	7	0.781
NC_015556_1	1.21|347396|32|NC_015556|PILER-CR	347396-347427	32	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	220650-220681	7	0.781
NC_015556_1	1.15|347036|32|NC_015556|PILER-CR	347036-347067	32	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	16053-16084	8	0.75
NC_015556_1	1.15|347036|32|NC_015556|PILER-CR	347036-347067	32	MK310138	Mycobacterium phage Shaobing, complete genome	57664-57695	8	0.75
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP053909	Hymenobacter sp. BRD128 plasmid unnamed1, complete sequence	95183-95214	8	0.75
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP019603	Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence	553307-553338	8	0.75
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	898941-898972	8	0.75
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	814199-814230	8	0.75
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1511925-1511956	8	0.75
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	902537-902568	8	0.75
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	901142-901173	8	0.75
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1088170-1088201	8	0.75
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	864653-864684	8	0.75
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	864676-864707	8	0.75
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	864676-864707	8	0.75
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	864676-864707	8	0.75
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	864676-864707	8	0.75
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	864676-864707	8	0.75
NC_015556_1	1.17|347156|32|NC_015556|PILER-CR	347156-347187	32	NC_008043	Ruegeria sp. TM1040 megaplasmid, complete sequence	154087-154118	8	0.75
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NC_017805	Deinococcus gobiensis I-0 plasmid P1, complete sequence	355870-355901	8	0.75
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP024423	Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence	216078-216109	8	0.75
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP020441	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence	213050-213081	8	0.75
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	408698-408729	8	0.75
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP031082	Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence	132905-132936	8	0.75
NC_015556_1	1.21|347396|32|NC_015556|PILER-CR	347396-347427	32	NZ_CP046332	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed2	232351-232382	8	0.75
NC_015556_1	1.21|347396|32|NC_015556|PILER-CR	347396-347427	32	NC_006466	Cupriavidus metallidurans CH34 plasmid pMOL30, complete sequence	190393-190424	8	0.75
NC_015556_1	1.25|347699|32|NC_015556|CRISPRCasFinder,PILER-CR	347699-347730	32	NZ_CP021373	Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence	482078-482109	8	0.75
NC_015556_1	1.25|347699|32|NC_015556|CRISPRCasFinder,PILER-CR	347699-347730	32	NZ_CP018223	Tardibacter chloracetimidivorans strain JJ-A5 plasmid pHSL2, complete sequence	6693-6724	8	0.75
NC_015556_1	1.15|347036|32|NC_015556|PILER-CR	347036-347067	32	NZ_CP038854	Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence	290244-290275	9	0.719
NC_015556_1	1.15|347036|32|NC_015556|PILER-CR	347036-347067	32	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	643499-643530	9	0.719
NC_015556_1	1.15|347036|32|NC_015556|PILER-CR	347036-347067	32	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	2009137-2009168	9	0.719
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	213260-213291	9	0.719
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP034185	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence	375248-375279	9	0.719
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP016287	Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence	959720-959751	9	0.719
NC_015556_1	1.20|347336|32|NC_015556|PILER-CR	347336-347367	32	MT684587	Microbacterium phage Fede, complete genome	21081-21112	9	0.719
NC_015556_1	1.21|347396|32|NC_015556|PILER-CR	347396-347427	32	NZ_CP018385	Burkholderia pseudomallei strain 2008724860 plasmid p1, complete sequence	221924-221955	9	0.719
NC_015556_1	1.21|347396|32|NC_015556|PILER-CR	347396-347427	32	NZ_CP018385	Burkholderia pseudomallei strain 2008724860 plasmid p1, complete sequence	221933-221964	9	0.719
NC_015556_1	1.21|347396|32|NC_015556|PILER-CR	347396-347427	32	NZ_AP015031	Pseudomonas putida strain KF715 plasmid pKF715B, complete sequence	189766-189797	9	0.719
NC_015556_1	1.21|347396|32|NC_015556|PILER-CR	347396-347427	32	NZ_AP015031	Pseudomonas putida strain KF715 plasmid pKF715B, complete sequence	189775-189806	9	0.719
NC_015556_1	1.21|347396|32|NC_015556|PILER-CR	347396-347427	32	NZ_AP015031	Pseudomonas putida strain KF715 plasmid pKF715B, complete sequence	189784-189815	9	0.719
NC_015556_1	1.21|347396|32|NC_015556|PILER-CR	347396-347427	32	NZ_CP044084	Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence	286628-286659	9	0.719
NC_015556_1	1.21|347396|32|NC_015556|PILER-CR	347396-347427	32	NZ_CP044084	Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence	286637-286668	9	0.719
NC_015556_1	1.23|347579|32|NC_015556|CRISPRCasFinder,PILER-CR	347579-347610	32	NZ_CP049319	Caballeronia sp. SBC2 plasmid pSBC2-3, complete sequence	724995-725026	9	0.719
NC_015556_1	1.5|347216|36|NC_015556|CRT	347216-347251	36	KT001914	Caulobacter phage Seuss, complete genome	80090-80125	10	0.722
NC_015556_1	1.13|347696|36|NC_015556|CRT	347696-347731	36	NZ_CP021373	Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence	482077-482112	10	0.722
NC_015556_1	1.15|347036|32|NC_015556|PILER-CR	347036-347067	32	NC_014258	Pantoea vagans C9-1 plasmid pPag3, complete sequence	247174-247205	10	0.688
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NC_012855	Ralstonia pickettii 12D plasmid pRp12D01, complete sequence	40537-40568	10	0.688
NC_015556_1	1.16|347096|32|NC_015556|PILER-CR	347096-347127	32	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	244888-244919	10	0.688
NC_015556_1	1.18|347216|32|NC_015556|PILER-CR	347216-347247	32	NZ_CP030829	Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence	103291-103322	10	0.688
NC_015556_1	1.20|347336|32|NC_015556|PILER-CR	347336-347367	32	NZ_CP034302	Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-3, complete sequence	41579-41610	10	0.688
NC_015556_1	1.21|347396|32|NC_015556|PILER-CR	347396-347427	32	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	466579-466610	10	0.688
NC_015556_1	1.24|347639|32|NC_015556|CRISPRCasFinder,PILER-CR	347639-347670	32	KT887557	Pseudomonas phage phi1, complete genome	53654-53685	10	0.688
NC_015556_1	1.15|347036|32|NC_015556|PILER-CR	347036-347067	32	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	359458-359489	11	0.656
NC_015556_1	1.15|347036|32|NC_015556|PILER-CR	347036-347067	32	NC_017957	Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence	323301-323332	11	0.656

1. spacer 1.15|347036|32|NC_015556|PILER-CR matches to MH617115 (Siphoviridae sp. isolate ctjh_2, complete genome) position: , mismatch: 1, identity: 0.969

ccctccggcaccgccacgcccgcaggatgtac	CRISPR spacer
ccctccggcaccgccacgcccgcaggctgtac	Protospacer
************************** *****

2. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP035709 (Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt12, complete sequence) position: , mismatch: 3, identity: 0.906

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
gtgggcgaggtgtggggcgtcggcccgcgcat	Protospacer
******************.****** **** *

3. spacer 1.2|347036|36|NC_015556|CRT matches to MH617115 (Siphoviridae sp. isolate ctjh_2, complete genome) position: , mismatch: 5, identity: 0.861

ccctccggcaccgccacgcccgcaggatgtactttc	CRISPR spacer
ccctccggcaccgccacgcccgcaggctgtacggct	Protospacer
************************** *****  ..

4. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP005192 (Sphingobium sp. MI1205 plasmid pMI3, complete sequence) position: , mismatch: 5, identity: 0.844

gtgggcgaggtgtggggcatcggccggcgcct-	CRISPR spacer
gttggcgaggtttggggcatcgg-cggcgcgct	Protospacer
** ******** *********** ****** . 

5. spacer 1.16|347096|32|NC_015556|PILER-CR matches to AB244976 (Uncultured bacterium plasmid pLB1 DNA, complete sequence) position: , mismatch: 5, identity: 0.844

gtgggcgaggtgtggggcatcggccggcgcct-	CRISPR spacer
gttggcgaggtttggggcatcgg-cggcgcgct	Protospacer
** ******** *********** ****** . 

6. spacer 1.3|347096|36|NC_015556|CRT matches to NZ_CP035709 (Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt12, complete sequence) position: , mismatch: 6, identity: 0.833

gtgggcgaggtgtggggcatcggccggcgccttttc	CRISPR spacer
gtgggcgaggtgtggggcgtcggcccgcgcatcggc	Protospacer
******************.****** **** *.  *

7. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP010057 (Hymenobacter sp. DG25B plasmid, complete sequence) position: , mismatch: 6, identity: 0.812

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
gtgggcgacgtgtggggcatcggccgcagtac	Protospacer
******** *****************  *. .

8. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP017947 (Bosea sp. Tri-49 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
cgccatcgcctgggcggcaaagcgctccgcct	Protospacer
**** .. ******************* *** 

9. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 6, identity: 0.812

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
ctccgcagcctgagcggcaaagcgctcggcct	Protospacer
* ** *  ****.****************** 

10. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP028965 (Burkholderia sp. IDO3 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.812

-cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
acggatc-gcctgcgcgccaaagcgctcggcca	Protospacer
 **  **  **** *** ***************

11. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP013426 (Burkholderia sp. MSMB0856 plasmid pMSMB0856, complete sequence) position: , mismatch: 6, identity: 0.812

-cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
acgtatc-gcctgcgcgccaaagcgctcggcca	Protospacer
 **. **  **** *** ***************

12. spacer 1.3|347096|36|NC_015556|CRT matches to NZ_CP010057 (Hymenobacter sp. DG25B plasmid, complete sequence) position: , mismatch: 7, identity: 0.806

gtgggcgaggtgtggggcatcggccg----gcgccttttc	CRISPR spacer
gtgggcgacgtgtggggcatcggccgcagtacgccg----	Protospacer
******** *****************    .****     

13. spacer 1.16|347096|32|NC_015556|PILER-CR matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
gtgggcgaggtccggggcatcggcctgatcgc	Protospacer
*********** .************ *  * .

14. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

15. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

16. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

17. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

18. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

19. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

20. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

21. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

22. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

23. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

24. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

25. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

26. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

27. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

28. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

29. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

30. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

31. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

32. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

33. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

34. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

35. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

36. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

37. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

38. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

39. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

40. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

41. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

42. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

43. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

44. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

45. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

46. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

47. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

48. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

49. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

50. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

51. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

52. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

53. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

54. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

55. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

56. spacer 1.16|347096|32|NC_015556|PILER-CR matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

57. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

58. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

59. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

60. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

61. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

62. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

63. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggccccagcgt	Protospacer
.*************** ** *****   ** *

64. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP003425 (Serratia sp. SCBI plasmid SCBI_Pl, complete sequence) position: , mismatch: 7, identity: 0.781

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
gtagaggaggtgtggggcgttggccggcggat	Protospacer
**.*. ************.*.********  *

65. spacer 1.18|347216|32|NC_015556|PILER-CR matches to KT001914 (Caulobacter phage Seuss, complete genome) position: , mismatch: 7, identity: 0.781

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
ttcctcttcctcggcggcaaggcgctcgaact	Protospacer
. ********* ********.*******. * 

66. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP021026 (Rhizobium sp. TAL182 plasmid pRetTAL182b, complete sequence) position: , mismatch: 7, identity: 0.781

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
gagcccttcctcggcggcaatgcgctcggcaa	Protospacer
 . *.****** ******** ********* *

67. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP013597 (Rhizobium sp. N741 plasmid pRspN741b, complete sequence) position: , mismatch: 7, identity: 0.781

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
gagcccttcctcggcggcaatgcgctcggcaa	Protospacer
 . *.****** ******** ********* *

68. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP013501 (Rhizobium esperanzae strain N561 plasmid pRspN561a, complete sequence) position: , mismatch: 7, identity: 0.781

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
gagcccttcctcggcggcaatgcgctcggcaa	Protospacer
 . *.****** ******** ********* *

69. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP013507 (Rhizobium sp. N1341 plasmid pRspN1341b, complete sequence) position: , mismatch: 7, identity: 0.781

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
gagcccttcctcggcggcaatgcgctcggcaa	Protospacer
 . *.****** ******** ********* *

70. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP013518 (Rhizobium sp. N113 plasmid pRspN113a, complete sequence) position: , mismatch: 7, identity: 0.781

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
gagcccttcctcggcggcaatgcgctcggcaa	Protospacer
 . *.****** ******** ********* *

71. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP013491 (Rhizobium sp. N6212 plasmid pRspN6212a, complete sequence) position: , mismatch: 7, identity: 0.781

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
gagcccttcctcggcggcaatgcgctcggcaa	Protospacer
 . *.****** ******** ********* *

72. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP013496 (Rhizobium sp. N621 plasmid pRspN621a, complete sequence) position: , mismatch: 7, identity: 0.781

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
gagcccttcctcggcggcaatgcgctcggcaa	Protospacer
 . *.****** ******** ********* *

73. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP013591 (Rhizobium sp. N871 plasmid pRspN871a, complete sequence) position: , mismatch: 7, identity: 0.781

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
gagcccttcctcggcggcaatgcgctcggcaa	Protospacer
 . *.****** ******** ********* *

74. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 7, identity: 0.781

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
ctccgcgccctgtgccgcaaagcgctcggcct	Protospacer
* ** * .**** ** *************** 

75. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 7, identity: 0.781

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
ctctgcggccagggcggcaaagcgctcgggca	Protospacer
* *. *  ** ****************** **

76. spacer 1.21|347396|32|NC_015556|PILER-CR matches to NZ_CP036351 (Planctomycetes bacterium K2D plasmid pK2D_1, complete sequence) position: , mismatch: 7, identity: 0.781

ctgcatgccagccaggccacccatgccgtcat	CRISPR spacer
attcttgccggccaggccacccgtgccgtcga	Protospacer
 * * ****.************.*******. 

77. spacer 1.21|347396|32|NC_015556|PILER-CR matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

ctgcatgccagccaggccacccatgccgtcat	CRISPR spacer
tagcatgccacccatgccacccatgcccccgt	Protospacer
. ******** *** ************ .*.*

78. spacer 1.21|347396|32|NC_015556|PILER-CR matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 7, identity: 0.781

ctgcatgccagccaggccacccatgccgtcat	CRISPR spacer
tagcatgccacccatgccacccatgcccccgt	Protospacer
. ******** *** ************ .*.*

79. spacer 1.15|347036|32|NC_015556|PILER-CR matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 8, identity: 0.75

ccctccggcaccgccacgcccgcaggatgtac	CRISPR spacer
ccgtccggcaccgccgcgcccgcctgcgccac	Protospacer
** ************.*******  *   .**

80. spacer 1.15|347036|32|NC_015556|PILER-CR matches to MK310138 (Mycobacterium phage Shaobing, complete genome) position: , mismatch: 8, identity: 0.75

ccctccggcaccgccacgcccgcaggatgtac	CRISPR spacer
tcctccggcatcgccacgccctcatgcaccac	Protospacer
.*********.********** ** *   .**

81. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP053909 (Hymenobacter sp. BRD128 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
gccgccgacgtgtggggcatcggccggcagta	Protospacer
*. * *** *******************. . 

82. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP019603 (Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence) position: , mismatch: 8, identity: 0.75

gtgggcgaggtgtggggcatcggcc--ggcgcct	CRISPR spacer
acgggcgcggtgcggggcatcggccttgctgc--	Protospacer
..***** ****.************  * .**  

83. spacer 1.16|347096|32|NC_015556|PILER-CR matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggctccagcgt	Protospacer
.*************** ** ****.   ** *

84. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggctccagcgt	Protospacer
.*************** ** ****.   ** *

85. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 8, identity: 0.75

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggctccagcgt	Protospacer
.*************** ** ****.   ** *

86. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggctccagcgt	Protospacer
.*************** ** ****.   ** *

87. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggctccagcgt	Protospacer
.*************** ** ****.   ** *

88. spacer 1.16|347096|32|NC_015556|PILER-CR matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggctccagcgt	Protospacer
.*************** ** ****.   ** *

89. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggctccagcgt	Protospacer
.*************** ** ****.   ** *

90. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggctccagcgt	Protospacer
.*************** ** ****.   ** *

91. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggctccagcgt	Protospacer
.*************** ** ****.   ** *

92. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggctccagcgt	Protospacer
.*************** ** ****.   ** *

93. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggctccagcgt	Protospacer
.*************** ** ****.   ** *

94. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
atgggcgaggtgtgggtcagcggctccagcgt	Protospacer
.*************** ** ****.   ** *

95. spacer 1.17|347156|32|NC_015556|PILER-CR matches to NC_008043 (Ruegeria sp. TM1040 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

cggccttggctggaggcccatgtgggcgagca	CRISPR spacer
cgcggctgtctggaggcctatgtgggcgatta	Protospacer
**   .** *********.********** .*

96. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NC_017805 (Deinococcus gobiensis I-0 plasmid P1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
gcgcgcgccctcggcggcgaagcgctcggcca	Protospacer
   * * .*** ******.*************

97. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP024423 (Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
cgcgcgcacctcggcggcaaagcggtcggccg	Protospacer
*** . . *** ************ ******.

98. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP020441 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
cgcgcgcacctcggcggcaaagcggtcggccg	Protospacer
*** . . *** ************ ******.

99. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
accgtccgactgggcggcgcagcgctcggcca	Protospacer
  * **.  *********. ************

100. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP031082 (Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence) position: , mismatch: 8, identity: 0.75

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
cgcgcgcacctcggcggcaaagcggtcggccg	Protospacer
*** . . *** ************ ******.

101. spacer 1.21|347396|32|NC_015556|PILER-CR matches to NZ_CP046332 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed2) position: , mismatch: 8, identity: 0.75

ctgcatgccagccaggccacccatgccgtcat	CRISPR spacer
gtccatgccacccatgccacccatgccaccca	Protospacer
 * ******* *** ************..*  

102. spacer 1.21|347396|32|NC_015556|PILER-CR matches to NC_006466 (Cupriavidus metallidurans CH34 plasmid pMOL30, complete sequence) position: , mismatch: 8, identity: 0.75

ctgcatgccagccaggccacccatgccgtcat	CRISPR spacer
gtccatgccacccatgccacccatgccaccca	Protospacer
 * ******* *** ************..*  

103. spacer 1.25|347699|32|NC_015556|CRISPRCasFinder,PILER-CR matches to NZ_CP021373 (Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence) position: , mismatch: 8, identity: 0.75

atgaaggcgaagagcagtgcgccggcgaatgc	CRISPR spacer
gcgaaggcgaagagcagggcgccgccgatgaa	Protospacer
..*************** ****** ***  . 

104. spacer 1.25|347699|32|NC_015556|CRISPRCasFinder,PILER-CR matches to NZ_CP018223 (Tardibacter chloracetimidivorans strain JJ-A5 plasmid pHSL2, complete sequence) position: , mismatch: 8, identity: 0.75

atgaaggcgaagagcagtgcgccggcgaatgc-	CRISPR spacer
atgaaggcgaagaacagagcgccaa-aaatata	Protospacer
*************.*** *****.. .***.. 

105. spacer 1.15|347036|32|NC_015556|PILER-CR matches to NZ_CP038854 (Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ccctccggcaccgccacgcccgcaggatgtac	CRISPR spacer
gaatccggcaccgcaacgcccgcgggagctgg	Protospacer
   *********** ********.***  *. 

106. spacer 1.15|347036|32|NC_015556|PILER-CR matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ccctccggcaccgccacgcccgcaggatgtac	CRISPR spacer
ccctccggcacctcgacgcccgccatccgcag	Protospacer
************ * ******** .  .*.* 

107. spacer 1.15|347036|32|NC_015556|PILER-CR matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 9, identity: 0.719

ccctccggcaccgccacgcccgcaggatgtac	CRISPR spacer
ccctccggcacctcgacgcccgccatccgcag	Protospacer
************ * ******** .  .*.* 

108. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 9, identity: 0.719

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
gcgggcgaggtgtcggacatcggccgctatgc	Protospacer
*.*********** **.********* ... .

109. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP034185 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
cctgacttcctgagcggcaaagcgctcgatgc	Protospacer
* .  *******.***************..  

110. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP016287 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
ggtccagtcctgcgcggcacagcgctcggctc	Protospacer
 *.*.  ***** ****** **********. 

111. spacer 1.20|347336|32|NC_015556|PILER-CR matches to MT684587 (Microbacterium phage Fede, complete genome) position: , mismatch: 9, identity: 0.719

gcggtaccaacaagctgaaccctggccagggt	CRISPR spacer
tcgcgtacaacaagctgaacgctgggcaggcg	Protospacer
 **    ************* **** ****  

112. spacer 1.21|347396|32|NC_015556|PILER-CR matches to NZ_CP018385 (Burkholderia pseudomallei strain 2008724860 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

ctgcatgccagccaggccacccatgccgtcat	CRISPR spacer
gcccatgccacccatgccacccatgccaccca	Protospacer
 . ******* *** ************..*  

113. spacer 1.21|347396|32|NC_015556|PILER-CR matches to NZ_CP018385 (Burkholderia pseudomallei strain 2008724860 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

ctgcatgccagccaggccacccatgccgtcat	CRISPR spacer
acccatgccacccatgccacccatgccaccca	Protospacer
 . ******* *** ************..*  

114. spacer 1.21|347396|32|NC_015556|PILER-CR matches to NZ_AP015031 (Pseudomonas putida strain KF715 plasmid pKF715B, complete sequence) position: , mismatch: 9, identity: 0.719

ctgcatgccagccaggccacccatgccgtcat	CRISPR spacer
agccatgccagccatgccagccatgccagcca	Protospacer
   *********** **** *******. *  

115. spacer 1.21|347396|32|NC_015556|PILER-CR matches to NZ_AP015031 (Pseudomonas putida strain KF715 plasmid pKF715B, complete sequence) position: , mismatch: 9, identity: 0.719

ctgcatgccagccaggccacccatgccgtcat	CRISPR spacer
agccatgccagccatgccagccatgccagcca	Protospacer
   *********** **** *******. *  

116. spacer 1.21|347396|32|NC_015556|PILER-CR matches to NZ_AP015031 (Pseudomonas putida strain KF715 plasmid pKF715B, complete sequence) position: , mismatch: 9, identity: 0.719

ctgcatgccagccaggccacccatgccgtcat	CRISPR spacer
agccatgccagccatgccagccatgccagcca	Protospacer
   *********** **** *******. *  

117. spacer 1.21|347396|32|NC_015556|PILER-CR matches to NZ_CP044084 (Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ctgcatgccagccaggccacccatgccgtcat	CRISPR spacer
agccatgccagccatgccagccatgccagcca	Protospacer
   *********** **** *******. *  

118. spacer 1.21|347396|32|NC_015556|PILER-CR matches to NZ_CP044084 (Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ctgcatgccagccaggccacccatgccgtcat	CRISPR spacer
agccatgccagccatgccagccatgccagcca	Protospacer
   *********** **** *******. *  

119. spacer 1.23|347579|32|NC_015556|CRISPRCasFinder,PILER-CR matches to NZ_CP049319 (Caballeronia sp. SBC2 plasmid pSBC2-3, complete sequence) position: , mismatch: 9, identity: 0.719

gacacgaaacgtatgcggcacaactcgatgtt	CRISPR spacer
ctcacgaaacgtatgctgcacgacttcctggg	Protospacer
  ************** ****.***.  **  

120. spacer 1.5|347216|36|NC_015556|CRT matches to KT001914 (Caulobacter phage Seuss, complete genome) position: , mismatch: 10, identity: 0.722

cgcctcttcctgggcggcaaagcgctcggccatttc	CRISPR spacer
ttcctcttcctcggcggcaaggcgctcgaactcagc	Protospacer
. ********* ********.*******. * .  *

121. spacer 1.13|347696|36|NC_015556|CRT matches to NZ_CP021373 (Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence) position: , mismatch: 10, identity: 0.722

aaaatgaaggcgaagagcagtgcgccggcgaatgcg	CRISPR spacer
acggcgaaggcgaagagcagggcgccgccgatgaag	Protospacer
* ...*************** ****** ***  . *

122. spacer 1.15|347036|32|NC_015556|PILER-CR matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 10, identity: 0.688

ccctccggcaccgccacgcccgcaggatgtac	CRISPR spacer
aaacccggcaccgcaacgcccgcgggagctgg	Protospacer
   .********** ********.***  *. 

123. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NC_012855 (Ralstonia pickettii 12D plasmid pRp12D01, complete sequence) position: , mismatch: 10, identity: 0.688

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
ctactggagctgtcgggcatcggccggcgtga	Protospacer
 *.   *** *** ***************.  

124. spacer 1.16|347096|32|NC_015556|PILER-CR matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 10, identity: 0.688

gtgggcgaggtgtggggcatcggccggcgcct	CRISPR spacer
tccgagccggtgtgcggcctcggccggcgcca	Protospacer
 . *.   ****** *** ************ 

125. spacer 1.18|347216|32|NC_015556|PILER-CR matches to NZ_CP030829 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence) position: , mismatch: 10, identity: 0.688

cgcctcttcctgggcggcaaagcgctcggcca	CRISPR spacer
cgcctcttcctggccggcacagccgcaatctt	Protospacer
************* ***** ***  . . *. 

126. spacer 1.20|347336|32|NC_015556|PILER-CR matches to NZ_CP034302 (Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-3, complete sequence) position: , mismatch: 10, identity: 0.688

gcggtaccaacaagctgaaccctggccagggt	CRISPR spacer
ctttgaccaagaagctgaacactggccagaag	Protospacer
 .   ***** ********* ********.. 

127. spacer 1.21|347396|32|NC_015556|PILER-CR matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 10, identity: 0.688

ctgcatgccagccaggccacccatgccgtcat	CRISPR spacer
gtctccttcagccaggccagccatgcggtcac	Protospacer
 * . . .*********** ****** ****.

128. spacer 1.24|347639|32|NC_015556|CRISPRCasFinder,PILER-CR matches to KT887557 (Pseudomonas phage phi1, complete genome) position: , mismatch: 10, identity: 0.688

tttgccatggttcacctcgatcccggccgagg	CRISPR spacer
agttccatgcttcacctcgattccggcttgct	Protospacer
  * ***** ***********.*****. .  

129. spacer 1.15|347036|32|NC_015556|PILER-CR matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

ccctccggcaccgccacgcccgcaggatgtac	CRISPR spacer
cccgccgccaccgccacgcccgcgctgccggt	Protospacer
*** *** ***************.  ..  ..

130. spacer 1.15|347036|32|NC_015556|PILER-CR matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 11, identity: 0.656

ccctccggcaccgccacgcccgcaggatgtac	CRISPR spacer
cccaccgccaccgccacgcccgccacggccga	Protospacer
*** *** *************** . .  .. 

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	1369170 : 1376189	8	uncultured_Caudovirales_phage(100.0%)	NA	NA
DBSCAN-SWA_2	1560861 : 1569273	9	uncultured_Caudovirales_phage(83.33%)	holin,portal,terminase,capsid,head,protease	NA
DBSCAN-SWA_3	1583726 : 1589099	9	uncultured_Caudovirales_phage(42.86%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NC_015556|1369170:1376189|DBSCAN-SWA
GTCAGACCACGAAGCGAGTTACCAGCTGATTCAGCTTGATCGCCAACTGAGACATCTCACCACAAGCACTGGCTGTCTGGCTGGCGCCTGCGGCGCTCTGCGAGGCAAGGTCACGAATGCGCAGCAGGTTCTGATCCACCTCACGCGCCACATGGGATTGCTCTTCTGATGCGGTGGCAATCTGCAGGTTGCGTTCGTTGATGTGGGTGATTGCGGTGGCGATCTGATCCAGGGAGCTGCTTGCCTCCTGGGCGATGTCCAGCGACTGGTTGGCCAGGTCGCGGCTGGTGCCCATCGCCTGAACGGCGTGCTCGGAATCGGTCTGAATGGCGGCGATCATCTGCTCGATTTCCTGGGTGGACATCTGGGTGCGATGCGCCAACGCCCTGACTTCATCAGCGACCACTGCAAAGCCACGCCCCTGTTCACCAGCACGAGCCGCTTCGATTGCGGCGTTCAGGGCCAGCAGGTTGGTCTGTTCCGCGATACCGCGGATGACTTCCACGACCTTGGAAATATTCTGCGCGCGATCCGACAGCCCCTGAATCTGCTCGCTCGTCTGTTCCACGTTGCCGCTCAGACGCTGGATCGATTTCAGCGTCTGCGACACGCGCTCCAGGCCAGCCTCGGTGAAGCCCTGGGTACGCTTGGATTCCTCAGAGGCGGACTCGGCATTGCGCGCCACTTCATCCACGGCAGCGCTCATCTCGGTGACCGCCGTCGCGGCCTGATTGACCTCGTCATTCTGAGCGACCATGCCGCGGCTGGAGGCCTCTGTGACCGCCGTCATTTCCTCGGCGGCGGAAGCCAGCTGAGTAGAAGAGTCGGAGATCTCCACGATGGTATGGCGCAGGTTCTGCTGCATCTGCGCCAGCGCCTTGAGCAGCCTGCCTGCCTCGTCGGTGCCACTTACGTGCACGTCCCTGGACAGGTTGCTGCCGGCGATTCGCTCTGCCACGGACAACGCATCGTTGATCGGAGCGGTAATGCTTCTCACCAGCAGGGCGGCAAGCGCAATGGTCAACAGCACCACGGCGACGACTATGCCGATAGTAAGCGCCAGCCCCGACGAATAAATTTCAGCCGCGTTCTGACCGGCTTGCGCCGCACCCTCGTTGTTGAAGTCGGTGAGTGCCTTGATCTGCTCTTCCATCTTGTTGGTGAGCGGGCGGATACCCGAGCTGACGAGGCTGACTGCAGCGGGAATGTCGCCGGCCCTCAGCATGGGTTCGAGCAGGTCCAGCTGCTTGGCATAGGCCTCGGCGCTGCTTTTCACGGCGCTGAATAGCGTGCGCTCGGTGTCGCTGGCTATCAGCGGTTCGTAATTTGCGACGGCATCGGTCAGGGCCTTGCGATACCCGGGGAAGCTATCGATGGTGCGCTTGAGGCTTTGAGGATCGGCCAGGCCACGCTGGGTTTCCAGCCTCAGGCGAAGGGTCGCCGCGTTCATGACCCCAGTCTGGCGGACGCTGGCCATCCAGTTCTGCTCAACATCTATTTCGATATCGCGCAGCTTGCCCATCTGCAGCACGGCGACCACACCGAGCACGAATACGAGCCCCACGATCAGCGCGAAGAAGAGGGCGGCGCGAGGCGCCAGGTTGAGATTTCTAAGGCTCATGGGAAAGATTCCGGGCGTTGAAGGTGGATGACCTGAGTGAGCTATCGACCTTGCCCAGGGAATATTTAAATATCAGCGTGCGTTTCCGACGGGCTGCTAGGTCACTCGCTAGAAGCTGGATAGCTCGTCCGGCCGGAACATCTTTTTAGTGTTTCAGTAGCTGGTCGAGTGCGTCGGACTTGCCATGGATGGTGAGCGATCAACCAACGTAGCGTTGACTTGATTGAGCCTGTTTTAGATGTCGTATCAGATGGGGAAGGATGTATTCTGCATCGGGGCCTACACCTCGAAGCGTGGCTGACGCGAAGTTACGTTGTCGAGGCAAGCCAACGAAGAACAGTCCCGGTAGCGTCTGAGCCACCCCATTTTTCTGCAGTAGGCGCCCATGCTGATCTCGTACTGGCAGGTTATCTAGAAAGGAAATGTTCGGCTGAAAACCGGTAGCGAAGATCAGGCTGTCGACGGTTTCGTAATGATCGTCTGCCCATATGACCCCATCTGAGGTAAGGCGGGTAAACATAGGCTTGCGCTGCAGCAAGCCAGACCTTATCGCCCGACGATATTTGCCCTGATCAAGCACAGGGGTTCCTTGATCAGTCAGCCAGCGCGTTTTCCCAAAACCGGTCCATTTCAACCATGTATGAAAGTCGACTCCCAGCATCCGCTGAGGGAAAAAGCGTATTTTTTCTCTTGTCGCCAAGGTGGTCACCGCAACGTTCGCAAGCTCGTAAGCGATCTGAACGGCCGAGTTGGCTGCTCCGATCACTACAACTCGTTCGCCATGGAAAGGGTATGTACTGCGATACTGAGCGCTGTGAATTACGCGTCCTTCAAACATGCCAAGGCCTGGGATGTCCGGGACGTACGGTCTGTTGAACCCGCCAGAAGCGACAACCACCGACTTCGCGCAAAGGCTCTCGCCGTTAGCAGTTTGTACTTCGAATCCTTGAGGGTGGGTTCGTACATGCGCCACTCGCGCGCCTTGGCGGATCGGCAGTCGGAAATGTTCTGCGTACCCCTCAAGGTATGCCACCACCTGGTCTCTGGTCGGATAGTTTTTTTGCGGGCCAGGGAAAGGTTGCCCTGGAAGAGCAGAGTACTCAGCTGGTGAAAAGAGCTGCAGGCTTTCGTAGTAATTTCGCCAGTTTCCGCCTGGTGCACCTTGTTCATCGATGATCAAGAATCTCAGGGCATGCTGCTGTAGCAACCGTCCGGCAGCAAGGCCTGCCTGGCCTGCGCCAATGATGATCGCATCGAGTTGCGGTTTTTTAATGTTCATATATGCGTACCTGTACACATAATGGCTTGAGCAAAATGGCCCTTAACTTGGGCAGCAGTGCGGCGCAATTTTCTTGATGTGATCAAGGATGGACTCAAGCCGAGTGATGATTGCAGAACCATTCACTTCGTAGAAAACTTGGCGGCCGCTCTTGGCTGCCCGAACGATGTCAGCCTCCAGCAGTATCTGCAGATGTCGTGAAACCACCGAGCGTTCTTGGGGGAGCCCTGCAGAGATTTCGCTCACGTCCGCGCGGCCCAACAGCATGACTCGCTTTAAAACGGCTATTCGCGACGGCTCGCACAGAGCTTTGAAGAATGCACTATCGAGCGAGGCGACGGCAGCCTCGATGGCTTGGGTTCGGGAAGTGGCGGCTGTTTTCATGGTTGTGAATATATGTGTGCAAGTATGCACATGTAAAGGAGTGCCTATTAACAAGCAGCGGTAGGTCAGGCTTGGATGCGGTCGTTGTGGCGCACTCATATGCATCTCATGATGCCGCGATCTCTTCAATATTTAGGGCGCACTAGCTAAGGGTTGGCTATATATGTGAATATCCGCATATTCGATTTTCCATGTATGTATATTTGCCATGCTGACTCCACCCGAAGCCTTCAAATGTTTGGCAGACGAGACCAGGGCTCGCGCAACCCTGTTGATTGCCGAGCATGGCGAGCTTTGCGTCTGTGAGTTGATGTGTGCGCTGCAGGACAATCAGTCCAAGATCAGCCGCCATTTGGCCCAGCTGCGAACAGCCGGTTTGCTGCTGGATCGTCGGCAGGGGCAGTGGGTGTATTACCGGCTCAATTCCGACCTTCCTGCGTGGTTCAAAGACGTGCTGCGCATTACCTGCGAAGGCAACGCGGCCTGGCTGAGCGATAGCACGTCTCGCCTGAGCAAGATGGATGGCCGCCCGCAGCGCGCCGCCAGTTGCTGCTGAGGCCTGCCGTTTTTTGAAACCTTCGTTGAAGCCCGCCAATGGCGGCAGGAGTCAGTAATGCGAGTGCTTTTTATGTGCACGGCCAATAGTTGCCGGAGCATCCTTTCCGAGGCGATGTTCAACCACATCGCACCTCAGGGATTCGAGGCCGTGAGTGCCGGTAGTTTCCCCAGGGGGCAAGTGCTACCCCGCAGCCTGCAAACGCTACAAGAGGCAGCTATATCTACCGCGGGCTTGAGCAGCAAGGGGAACGATGCCTTCGAGGCGAACCCGCCGGATATCGTCATCACCGTGTGCGACAAGGCCGCGGGTGAAGCATGCCCGGTTTACTTCGGCCCGGCGCTCAAGGCGCATTGGGGGTTGGCAGATCCTTCCGACGTACAGGGTGACGACGCCGATATTTCAGCCGCCTTCAAGGCGACGCTTGCGCAGATCGAACGGCGTTGCCGCGCTTTTCTGGCGCTGCCTTTTGCCGACTTGAGCCGCGATGAACTCAAGCGCGAGCTGGATCGCATTGGCCGATTCTGAGGACTCCTTGCATGACCACTGAACTTCCCAACCTCGAACACAGCCTGATCGGCCAGTTCTCCTTCCAGATCGCACCCAGCGCTCACAAACCACGCATCCTGTTGCTGCACGGCTCCACCCGTGAGCGCAGCTTCAGCCGTCTGTTGGTCGAGGAAGCGGCGCGGCTGCTGCAACACTTTGGCGCCGAGACCCGTATCTTCGATCCATCGGGCCTGCCGCTGCCCGATGATGCACCGGTTGAGCACCCCAAGGTGCAGGAGCTGCGGGACCTGGTGATGTGGTCGGAAGGGCAGGTCTGGTGCTCGCCGGAGCGGCATGGCGCCATGTCCGCGGTATTCAAGGCGCAGATCGACTGGATTCCGCTGGCGTTGGGGGCGGTTCGACCCAGCCAGGGCAAGACGCTCGCCGTGATGCAGGTTTGTGGCGGGTCGCAGTCGTTCAACGTGGTCAACCAGCTGCGCGTACTCGGGCGCTGGATGAGGATGTTCACCATCCCCAACCAGTCCTCGGTACCCAAGGCATTCACGGAGTTCGACGCTGAGGGGCGGATGAAGCCGTCTGCCTATTACGACCGGGTGGTCGATGTGATGGAGGAACTGATGAGGTTCACCCTGTTGCTGCGCGACCAGAAGGACTTTCTTGTAGATCGCTACTCCGAGCGCAAGGAAACCGCAGAACAACTTTCCGCCCGCGTTAATCAGCGTTCAATCTGAGGTGCCGTAGAGTGATTGACGTGAGACTGGCATCCGCGTCGGATGCCGAGGCAATCCAGGCCATCTATTCACCTGTGGTGCTGAACACCGCCATCTCGTTCGAAGAGATCCCTCCGTCACTGGAGGATATGCGTAGGCGGATTGTGGCGACGCTTGAGACCTATCCCTACCTGGTCGCCGAGCAGACAGGCGCCGTGGTCGGCTATGCCTACGCCAGCCAGCACCGCGCCCGGGCAGCGTACCGCTGGGCCGTGGATGTGACGGTGTACATTGCAGAAGATGCTCGTCGCCAGGGCGTTGGGCGGCGTTTGTATGAAGTCCTGCTGCCGATGCTCCAAGCGATGGGCTACCGCAGCGCCTATGCGGGTATTGCCCTGCCGAACGATGGCAGCATCGGGCTTCATGAGCGCCTCGGCTTCTGCCACATCGGCACCTTTCCGCGGGTTGGCTACAAACATGGCGCCTGGCATGACGTGGGCTACTGGCTACTCGAGCAGGGCGAAACTTCAGCGCCTCCGAGCGAGCCAATTACTCTTGCTGCTTACCTTGCAGGCCGTGACGAAGGTTTTCGCTGAAAACGGTCTAGTGCAATTGCAAACCTATGAATCCGGCGTAATTCCTTACGCCAACTGATGATTCCTGCCTGGAGATCTCGATGCTCGTTGCGGCTGCCGTATTCGTCTTCACACTGGTTCTGGTCATCTGGCAACCCAAAGGGCTCGGCGTGGGCTGGAGCGCGACGATTGGCGCGCTGCTGGCCCTGGGTGTCGGCGCGGTCTCGCTGCACGACATTCCCACGGTGTGGGCGGTGGTGTGGAACGCCACGGCGGCGTTCGTGGCGATCATCATCATCAGCCTGCTGCTGGACGAGGCTGGGTTCTTCACCTGGTCGGCGCTGCATGTGGCGCGTTGGGCGGGTGGCAGCGGCCCGCGCCTGTTCGCTTTCGTAGTGCTGCTGGGCGCTGCCGTTTCCGCGGTGTTCGCCAATGATGGGGCGGCGCTGATTCTCACACCCATCGTCATGTCGCTGCTCGTCGCACTGCGTTTTTCCAGCGCGGCGACCTTGGCATTCGTCATGGCCGCGGGCTTCATCGCCGATACTGCCAGCCTGCCGCTGGTGGTATCGAATCTGGTCAACATCGTGTCCGCCGACTTCTTCAAGCTCGGCGTGGCCGATTATGCGGCGGTGATGCTGCCGGTGAACCTGGTCAGCGTATCGGCGACCCTGGCGGTGCTGTACCTGTATTTTCGCCGCAGCATTCCGGCTACCTATCAGGCAACGGAGCTGCAGGCGCCAAGCGAGGCGATTCGCGACCGCACCACCTTCATCTATGGCTGGTGGGTGCTGGCCTTCCTACTGATCGGCATTTTTGCGCTCGAGCCCATGGGCGTGCCGATCAGCGCTGTGGCGGCGCTGTGCGCAGTGGTGCTGCTTGCCGTCGCGTCAAAAGGGCATGTGATCTCGACGCGCCGGGTGATGCGCGAAGCGCCCTGGCAGATCGTGATCTTCTCCCTGGGCATGTACCTGGTGGTGTTCGGGCTGAGCAATGCCGGCCTGAGCCACTACCTGGCGACGCTGCTCGACCGGCTCGCCGAGCAGGGGTTGTGGGCGGCCGCCCTGGGTACGGGCTTTCTGGCGGCGCTGCTGTCTTCGGTGATGAACAATCTGCCCAGCGTGCTGATCGGCGCGCTGTCCATCGAGGCGAGCCAGAGCAGCGGCATCGTGCGCGAGGCGATGATCTACGCCAACATCATCGGCTGCGACCTCGGTCCCAAGATCACGCCCATCGGCAGCCTTGCCACGCTGTTGTGGCTGCATGTGCTGCAGCGCAAGGGCCTGCGCATCACCTGGGGTTACTACTTCAAGGTTGGCGCCTTGCTGACGGTGCCGGTGCTGCTGGTTACCCTGTCGGCGCTCGCGTTGCGCCTGAGTCTCTAG

Protein sequences of DBSCAN-SWA_1

>NC_015556|1369170:1376189|1374246_1374825_+|WP_157139377.1|DBSCAN-SWA
MRCRRVIDVRLASASDAEAIQAIYSPVVLNTAISFEEIPPSLEDMRRRIVATLETYPYLVAEQTGAVVGYAYASQHRARAAYRWAVDVTVYIAEDARRQGVGRRLYEVLLPMLQAMGYRSAYAGIALPNDGSIGLHERLGFCHIGTFPRVGYKHGAWHDVGYWLLEQGETSAPPSEPITLAAYLAGRDEGFR
>NC_015556|1369170:1376189|1374905_1376189_+|WP_013790367.1|DBSCAN-SWA
MLVAAAVFVFTLVLVIWQPKGLGVGWSATIGALLALGVGAVSLHDIPTVWAVVWNATAAFVAIIIISLLLDEAGFFTWSALHVARWAGGSGPRLFAFVVLLGAAVSAVFANDGAALILTPIVMSLLVALRFSSAATLAFVMAAGFIADTASLPLVVSNLVNIVSADFFKLGVADYAAVMLPVNLVSVSATLAVLYLYFRRSIPATYQATELQAPSEAIRDRTTFIYGWWVLAFLLIGIFALEPMGVPISAVAALCAVVLLAVASKGHVISTRRVMREAPWQIVIFSLGMYLVVFGLSNAGLSHYLATLLDRLAEQGLWAAALGTGFLAALLSSVMNNLPSVLIGALSIEASQSSGIVREAMIYANIIGCDLGPKITPIGSLATLLWLHVLQRKGLRITWGYYFKVGALLTVPVLLVTLSALALRLSL
>NC_015556|1369170:1376189|1373066_1373537_+|WP_013790364.1|DBSCAN-SWA
MRVLFMCTANSCRSILSEAMFNHIAPQGFEAVSAGSFPRGQVLPRSLQTLQEAAISTAGLSSKGNDAFEANPPDIVITVCDKAAGEACPVYFGPALKAHWGLADPSDVQGDDADISAAFKATLAQIERRCRAFLALPFADLSRDELKRELDRIGRF
>NC_015556|1369170:1376189|1369170_1370790_-|WP_013790360.1|DBSCAN-SWA
MSLRNLNLAPRAALFFALIVGLVFVLGVVAVLQMGKLRDIEIDVEQNWMASVRQTGVMNAATLRLRLETQRGLADPQSLKRTIDSFPGYRKALTDAVANYEPLIASDTERTLFSAVKSSAEAYAKQLDLLEPMLRAGDIPAAVSLVSSGIRPLTNKMEEQIKALTDFNNEGAAQAGQNAAEIYSSGLALTIGIVVAVVLLTIALAALLVRSITAPINDALSVAERIAGSNLSRDVHVSGTDEAGRLLKALAQMQQNLRHTIVEISDSSTQLASAAEEMTAVTEASSRGMVAQNDEVNQAATAVTEMSAAVDEVARNAESASEESKRTQGFTEAGLERVSQTLKSIQRLSGNVEQTSEQIQGLSDRAQNISKVVEVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQMSTQEIEQMIAAIQTDSEHAVQAMGTSRDLANQSLDIAQEASSSLDQIATAITHINERNLQIATASEEQSHVAREVDQNLLRIRDLASQSAAGASQTASACGEMSQLAIKLNQLVTRFVV
>NC_015556|1369170:1376189|1372661_1373009_+|WP_013790363.1|DBSCAN-SWA
MLTPPEAFKCLADETRARATLLIAEHGELCVCELMCALQDNQSKISRHLAQLRTAGLLLDRRQGQWVYYRLNSDLPAWFKDVLRITCEGNAAWLSDSTSRLSKMDGRPQRAASCC
>NC_015556|1369170:1376189|1372111_1372453_-|WP_013790362.1|DBSCAN-SWA
MKTAATSRTQAIEAAVASLDSAFFKALCEPSRIAVLKRVMLLGRADVSEISAGLPQERSVVSRHLQILLEADIVRAAKSGRQVFYEVNGSAIITRLESILDHIKKIAPHCCPS
>NC_015556|1369170:1376189|1373548_1374250_+|WP_013790365.1|DBSCAN-SWA
MTTELPNLEHSLIGQFSFQIAPSAHKPRILLLHGSTRERSFSRLLVEEAARLLQHFGAETRIFDPSGLPLPDDAPVEHPKVQELRDLVMWSEGQVWCSPERHGAMSAVFKAQIDWIPLALGAVRPSQGKTLAVMQVCGGSQSFNVVNQLRVLGRWMRMFTIPNQSSVPKAFTEFDAEGRMKPSAYYDRVVDVMEELMRFTLLLRDQKDFLVDRYSERKETAEQLSARVNQRSI
>NC_015556|1369170:1376189|1370989_1372069_-|WP_013790361.1|DBSCAN-SWA
MNIKKPQLDAIIIGAGQAGLAAGRLLQQHALRFLIIDEQGAPGGNWRNYYESLQLFSPAEYSALPGQPFPGPQKNYPTRDQVVAYLEGYAEHFRLPIRQGARVAHVRTHPQGFEVQTANGESLCAKSVVVASGGFNRPYVPDIPGLGMFEGRVIHSAQYRSTYPFHGERVVVIGAANSAVQIAYELANVAVTTLATREKIRFFPQRMLGVDFHTWLKWTGFGKTRWLTDQGTPVLDQGKYRRAIRSGLLQRKPMFTRLTSDGVIWADDHYETVDSLIFATGFQPNISFLDNLPVRDQHGRLLQKNGVAQTLPGLFFVGLPRQRNFASATLRGVGPDAEYILPHLIRHLKQAQSSQRYVG

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013790360.1|1369170_1370790_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.3e-68	42.3
WP_013790361.1|1370989_1372069_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_013790362.1|1372111_1372453_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013790363.1|1372661_1373009_+	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	8.9e-31	58.4
WP_013790364.1|1373066_1373537_+	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	1.4e-58	71.4
WP_013790365.1|1373548_1374250_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	4.2e-104	79.3
WP_157139377.1|1374246_1374825_+	GNAT family N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	4.7e-61	66.9
WP_013790367.1|1374905_1376189_+	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	2.7e-165	69.7

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NC_015556|1560861:1569273|DBSCAN-SWA
GATGGCTAGTTTGATCATGACCCAGGCCACGTTCTGGCTGTGCGTGGTGCTGTTCGTTCGGTTGTTCACGTTTCAGCGTGGCGCCCTTCGCTTTCGGCGCGCCATGTCGTGCCTCGCCTACTTGGCGATGGCCAGTGCAGGGGCGGCGGTGATCCACATACTGCAGGGCGATCTGGTGTTACCTGGGCATGCGTGGCCGCTGGTGGTGCTGCTGGCGATCTTCACTGGGCTGGTGTTGCGGGCCCGCGGCAACCTGGCTGCTGTGCTGCGCCCAGGGGCTGGCTGGAATGGGCTGGAGCGGCGTCGCAGCAATGAGGGGTAGCATCACCGCCGGTGACCTCGACGATGCGTTGGCCGCGCTCAGGCAGTTGGAGCCGAAGCTGGCGAACGCCGCGTTGGCCGATGCGCTGAACCACACGCTCAACCAGGCCGCGCCATTGGTACGTGCCGAGATGCGCGACGTGTTCGACCGTCCGACGCCGTTCACGCTGAACTCCATCCGCAAGATCAACGCACGGCCCAACAATCTGGAAGCTGCGTTGTGGATCAAGGATGACAAGGACGGCGCAGCCACCGGCAAGCAGTTCGCCCCTGAAGACTGGGTGGCGCCGCAGGTGTTCGGTGGTGGTCGCCAGCAGCGAGCGTCCGAGACCTGGCTACGTCAGGCGGGAATTCTGCCGTCCGGGCTGTTTGCCGTGCCTGGTGCGGGGGCGCGCCTCGATCAGTACGGCAACATGCAGCGCGGCCACATGATGCAAATCCTGTCCGGGCTGAAGGCGCTGAACCGGTCCGGGTCTGATCACAGCGCGACGGCAAGTCGTCGATCGCTACGCAAGGGCCACGCTCTGGCGTTCTTCGTGATGAAACGGGGCAAGACGCCCATCGGGATCGCTGAGCGACGCGGCAAGTCGGTGAGCATGGTCATCGCCTTCGTACGTCAGCCGCAATATCGCGAGCGCCTGGACTTCCATGGTGTGGTGCGGCGAGTCGCCGAGAACGATGCGCAGCTCGAAGCGAACATCGACAAGGCCATAGCCGATGCCCTGAGCGGTCGGCTGCCGACCAGCTTCAGCCGTCGCCCTGGCGGCAGGCGGGCAGGGTAGCTGAGGGCGGCGCCCCGGCTGCGAAAGGGCCGGGGGCCCCTGGGGCCGCGGGGCTCGCAAGGGTAATTCGAGCCCCGCTCTCGCGCTAGTGGGAGGCCGTGAGAGTTAGTTAACAGGGGTTAATTCGGTTAATTCCTTGGGTAATTCTGGTTAACAGGTGAATTCATGGCGGTCATGTCTAAGGCTGAGTTCGCGGATAGCCGCGGCTGGTCTCGGCCGTATGTATCCAAGCTGGTCAGCCAGGGGCGCTTGGTACTGACCGATGACGGCAAGAAGATCGATGTCGAGGCCAGCCTCGCGCTGTTGGGTGAGACAGCCGACCCAAGCAAGGCCGGCGTAGCGGAGCGGCACCAGCGCGACCGAGCTGAAAAGGGCGTGCATGCGCTCGTTTCGCCCTTGGCCCCGCCATCGACCGCGCCAGGCGGTGGCGGTGGCGACAGCTACCAGAAGGCGAGGGCGCACCGCGAAACATACTTGGCTCTGCTCGCCGAGGACGAATTCCTCAAGGGCCGCGGCGAGCTGGTCGAACGCAAGGCGGTCGACACCGCCGCTTTCAACACCGCGCGTACGGTGCGCGACCTGTTCCTGGGGCTGCCGCCCAAGATTGCCGGCGAGCTGATCGCGATCACCGACACCTGGGAGATGGAACGAAAGCTTACCGAGCTGTTTCGCGGCGTCCTTGAGGATGCCGCCAGCCTGGTGCAGCTGGACGCCGAGATCGAGCAGGGGACAAAGGAGCCGAACTAGCCATGCAACATCCGTATGCCGACGGTGCCGCCACGTACCGTGCGGCATACCTGCGGGGCCTGCACTTGGACCCCGAACTATGGATCGACCAGTGGGCCGACCACTACCAGCGGATCCCCAAGGACACCGGCGCCGCGGAGCCCGGTAAGTACCACACCGACCGCACGCCGTTCGCGCGTGAGCCGATGCGCTGCCTGTCGCCGCTGCATCCCTGCAAACGCGTGGTGACCATGGTCGCCTCGCAGATGATGAAGACGCAGATCGCGCTCAACTGGATCGGCGGCAACGTGCACATGGCGCCGGCCAACATTCTGGCGCTGCTGCCGAGCGAGAAGCTGGCCCGCCGGGTGTCCAGCCGGATCGACAAGACGATCAAGGCGGTGCCGGAGCTCAAGGAGCGTGTGGCAAAGCCTCGCTCCCGTGACGCGCGCAACACCCTGGATACCAAGGAGTTCGAGGGCGGCACGCTGTATTGCACGACCGCAGGCTCGGCCGCCAACCTGGCGGAGCTGGCCGCTCGCTACATCTACGGAGACGAGATCGACCGTTGGGATGTGGACGTCGACAGCGAAGGCGACCCCATCGAGCTGGCCGAAGCGCGCGGCACCACGTTCGGCCGTAAGGCGAAGTTCTACTTCTCCAGCTCGCCGACGATCAAGGGTGCCTCGCGCATCGACGATCTTTACGAGCAGAGCGACAAACGCCGCTACTTCGTGCCATGCCCGCACTGCGGACAGAACCAGGTGCTTGAGTGGGCCAACCTCAAGTGGACCGACGACTACAAGCGCGTCGACTACCTCTGCAGCAACGCCGAGTGCGGCGCGCTGATTGAGGAGCACCACAAGACGGCCATGCTGCTGGCTGGCGAGTGGCGCGCTACGGCGACGGGCGACGGCGAGACGGTGGGCTTCCACCTCAACGCGCTCTATTCGCCGCTGGGCTGGCTGTCCTGGCAGAGCTTGGCAAAGCAGTACGACAAGGCCAAAGCCGCGGCTGACCGTGGCGATAACGAGCCCATGCAAGTGTTCTACAACACCCGCCTGGCGCTCGTGTGGGACGCCGCCCAGGAGATGACCAAGGCTGACGAACTGAAGAAGCGCGCCGAGGACTATCGCCTGGGCACGGTGCCGGCTGGAGCGTTGATTCTCACCGCCGCCGTTGACGTGCAGCATAACCGGCTCGAATTGCTGGTGATTGGCTGGGGCGAGGGGTTGGAGCGCTGGGTGGTGGACTACGTTGTTGTGCCGGGTGACCCGGCAGTGCAGCGCACCTGGCTGGATCTGGACGAGCAACTGAAGCGCCGGTACCGGCACGCCTCTGGCGTCGAGCTGGCCATCTGTGCGACGGCGGTCGACTCCGGTGGTCACCACACCGATGAGGTCTACCAGTTCACCCGGTTACGCCGCTGGCGGAAAGTGTTCGCGGTGAAGGGGGCGAGCAAGCCCGGCCGCCCTGTGCTGGCTCAGCGCCCCTCGAAAGTCGATGTGACGTACAACGGGCAAACCGAGAAACAGGGCGCCGAGCTCTGGATCATCGGCACCGACACGGCGAAGGACTGGATCTACAACCGTTACCCGTTCGCCGACGGCCCAGGTGCATTGCACTTCTCGACAGACCTGCCCGATGAGTTCTACGCCCAGGCCGTGGCAGAGCGAAAGATCACCGTCTACGTGAAGGGCTACAAGCGCACCGTCTGGGTGAAAGGTAAGGCCGAGCGCAACGAAGTACTCGACCTACTGGTTTACAACCAGGCCGCAGCCCAGTTCCTGGGACTGCATCGTTATCACCTGGGCGAGTGGAGCAAGCTGCGCGCTGCGGTCAGCCAGGGCAGCCTGTTCGCGCAGCCTGCTGCCAGCAGCAACGTTGCGGCCCTGCAGGAAGAGACCGTGAAAGCAGCCAGCCCGCCACCCCCGAAGCCCGCACCCCAACCAACTGCGCGCCGCGTATCCCGCAGCGCCTACCTCAAACGATGACAAGAGGGCCGCCGATGGCCAGCGCACAGGAGCGCCTGGACGAAGTCCGGGCGTCAATTCAGGACATCCTGACCAAGGGGCAGAGCGTCAGTAAGGGTGACCGTCGGCTGGATCGGGCGGCCCTTGCGAGCCTGCGTATGTTGGAAGAGCAGTACGCCGCCGAAGCTGCCCGCGAGGCACGTGTGGGCCGCCCGCGGCAGATCCGGTTATACACCCGCGGCAAGGGGGCATGATGGGCTATCGAATTCGTGCCAAGCCAGCGCGGCTTCAGGTGGTGAACAGCTATGAGGGCGCCGGCCAAGGCCGTCGCGCGCAGAGCTGGGATGCCCCCGACGCTGCGCTGAACACCATTGCCATTCCGGCACTACCAACACTGCGCAAGCGCTCCAAGGCTGCGGTGCGCAATAACCCATGGGCCGCTAGCGGCATCGGGAAGCGCGTCAGCAGCCTGATCGGTACCGGCATCACACCGCGTGCCCAGATCAAGGATGAAGCGCTGCGCAGTGCCATCAACCAGCTTTGGAGTGACTGGACCGACGAATCCGACGCCGACAACCTCACCGACTTCTATGGCCAGCAGGCGCTAATAGCCCGCATGGTCGAAGAGTCCGGCGAGTGCTTCGTGCGGTTGCGGTATCGGCGGCCGGAGGATGGCCTGGCGGTACCACTGCAACTGCAGATCCTGCCGCCAGAGTTCGTGCCGCTCGATCGTAACTTCGTCACCCGCCGCGGCAACGTCGTGCGCGCTGGTATCGAGTTCGACCAGGTTGGGCGTCGCGTGGCGTACTGGATGTGGAAGAACCACCCCGGCGATGCCCGGGCGCTGGGAACCAGCTACAACACGCTTAACCGCATACCGGCCAGCGAGGTGCTGCACATCTTCGAGCCGCTGGAAGGTGGCCAGCTGCGCGGTATCCCGCGCCTCGCGCCAGTGCTGCTGCGGCTCAAGTCGCTGGATAACTATGACGACGCGGTGCTGTTCCGGCAGGAGCTGGCCAACCTCTTTGCCGGGTTCATCACCAAGCCCCGGCCGGACGGCCCTCCTGCCATTGATACGCTGACCGGGCAGCCGGTTCAGGCTGACTCCGATGGCACGCCGATGGTGGCCATGGAACCGGGCACCATGCAGGAACTGCTCGAAGGCGAGGAGGTTGTGTTCTCCGAACCGCCAGGCGCTGGCGACACCTACGTCGATTTCATGAAGCAACAGCTCATGGCTGCGGCGGCAGGCATCGAGCTGCCCTACGAGCTGCTCACCGGCGACATGGCCGACATCAGCGATCGCGTGCTGCGCGTGCTGCTCAACGAGTTCAGGCGCCGCATCGAGCAGCTGCAGTTCAGCGTTTACGTGTTCCAGCTCTGCCGCCCGGTTCGCGCCGCGTGGCTCGACACGGCCTGGCTTTCGGGAGCAATCCAGCTGCCCGACTACCAGGCAAAGCGCCGTGCCTATCTGCGCACGCGCTGGGTGCCGCAGGGCTGGGCCTACATGCACCCCGTGCAGGACGTGCAGGGCAAGCTGCTGGAAATCAAAGGCGGGATGGCCAGCCGCAGCGAGCACGCGCTGCGCAGCGGCTACGACGCCGAAGTCATCGACCAAGAAAACGCCGACGACAACGCTCGGGCCGAGAAGCTTGGGCTCAACTACACCACCGACACGGCCGACCTGGCTGGCCAGAAAGAGGAAACTCAATGATGAAGATGACCAACCGCCTGGCGCTGGCGGTAATGCTGGGCGGCCTGGGCATCGACGCCTTCGCCCAGCCGCGCATGCTGAACCTCGAAGGCGCGCCCGACCTACACGCCGAGCACTGGTACAGCATCCGGGCAGCTGGCGAGGAGGGCGCCAAGCCCATCGAGGTCTACATCTACGGCGAGATTGGGTTCTGGGGTGTCACCTCCGGTGACTTTATCCGTGACCTGAAAGAGATCGACGATGGCGTGTCGGAGGTGCATGTGCACTTCGACACCATCGGTGGTGACCTCTTCGACGGCATTGCCATCCACAACGCGCTGCGCGCGCTGGGCGAGCGCTGCACCGGGGTAATTGATGGCGCGTGCTTCAGTGCTGGCAGCGTGGCAGTGTGCGGCGCCCACCAGGTGCGCATGGCTGACAACGCCATGCTCATGATTCACAACCCCTGGACGTACATGGCCGGGGACAGCAACGAGCTGCGCCAGATGGCCGACATGATGGACAAGGCCTCGGAAGGCATCGTCGCCAGCTACCAGCATCGAGCGCTGAACATCGACGACGCCGAGCTGCGGCGCATGATCAACGACACCACCTGGCTCACGGCAAGCGAGGCCAAGACCCACGGTTTCGTCGACGAGGTGTTCGGCGAGGTCTCGCCTCTGGTGAACAACGCAGCCCTGGGCAAGATCCTCAACCGTTACCGCAATGTGCCCGAGGCGGCGCTGCGACTGGTGGGAGAGGTCGAGCCAGCAGCGCCCGAGCCAGAACCTGCTCCAGCCCCGGAGCCGGATCCAGTACCGGCTACCCCGGAAGCCGCAGAACTGGCGGCAAAGCTGGCAACCGACTGTGCCCAGGCCGGCTTGAGCAACTGCGTCAGCTACCTGATCAAGGCCAGTGCCTTGGCCAGCGCCGATGCTGTGCAGTCGCACTTCAATCGAGCCAAAGACGTCCGCGCCGCCTGCCTGGTAGCCAACCTGCCGGATGATGCCCAGGGCTTGATCGAGGCTGGGCTCAACGGCGATCAGGCCCGCGCCAAGTTGTTCGACAAGCTGGCCGCGAGCAGCAGCAAAGTGGAGATCAGCAATCTACCCCCGGTGGATGACGGCCCCCAGGCCGGCGCACACCAGCCCCCTGCGCCGAGCGAGGTCTACGCCCGGCGTCGCAAACAAGCCTCGAAAGGAGGAAACAACGCATGACCATCAAAACCGAAGGCGTGTACGCCGGTGAGTTTCTCCTCTCGGAGGCCAACGGCAGCCGCAGCCGCGAGGAGGTGGTCATCGCCGCCGGCTCCGGCATCCTCAAGGCCGGCACGTTGATCGCGCTGCTCACCGCTGCGAATGCTGCCCAGGTCACGGCAGATGCTGGCAACACCGGTAATGGCCTGCTCAACGGCATCTCGGTCACGAGCGCGGCCGTCTCTGGCACCTACGTGGTGGAGATCACCTCGGCGCCTGCAGCCGGCGCCAAGTTCGCGGTTCTCGACCTTGCCGGTAAGGAGGTTGGCGAAGGCGTGGTCGGTACCCAGTTCGTCAGTCCCGGCCTTTCCTTCGACCTCACCGAGGGTGCCACCAAGTTCGTGAAGGGTGACAAATTCACTCTTATGGTGAATGCCAACCTGGGCGAGTACACCGCCTATGACGACGACGGCACCGACGATGGCCGCCGCGCCGCCAGCGGCATTCTGTACGCCTCTGTGGACGCCACGCTGACCGATGTCCGCGCCGTCGGTGTGATGCGTGACGCCGAGGTGATCGAAAGCCTGCTCACCGGCATGGATGCCAACGGCCGCGCCGACCTGCTGGCAAAAGGGATCGTCATCCGTACCTGATCGCCAACCACAGAAACCCCAACACCCCAAGCCCCGCACCTGCGGGGCTTCGCATTTCTAGGAGCCCACCATGGCCGAAATCAGCATTTTCCAAGACGAGGCGTTCGGCGTTGACGCGCTGCTCACCGTCATCAACGAAGACCACGTACTGCCCGGGCAGGTTGCTGCCGCTGGCCTGTTCGAAGAGCAGGGCGTTGCCAGCACTGTTGTGCAGATCGAAAAGGACGGCATGACCCTCGCGCTGGTCAAAGCTGCTCCACGCGGCGCCCCTGGCCAGGCAGTCACCGGCGACAAGCGCAGCTTGATCCCTTTCAACACGGTTCACCTGCCGCAGACCTTCAATATCCTGGCGGATGAAATCCAGGGCATCCGCGCAGTCGGCAGCCTCACCGAGCTGATGCAGGTGCAGGCCTACGTCGCGCGCCGTATCGAAAAGGCACGCCGCCAGCTCGACCTTACCCACGAGTTCCAGCGCATCGGTGCCATCAAGGGCCAGGTAGTGGACGCTGATGGCCAGACCGTACTGTTCGACATTTTCCAGCGCTTCGACATCAAGCGTCCTGAGGTTGTCAGCCTCGAGCTGGATAGCCCTGATACCGATGTGTCTGCCAAGTGTGCCGAGATCCTCGACGCACAGGACGATGCGCTCGGTAACACCACCAGCAGTGGCGCTCATGCCTACTGTGGCAAAACCCTCTGGGCCAAGCTGATTGCCCACAAGAGCGTGCGCGAGGCCTATCTGAACTGGCAAGCCGCGGCGCAGCTGATGGGTGATCGTCGCCAGCCCTTCGAGTTCGGCGGGATCACCTGGGAGCGTTACAAGGGCAAGATCGGTAAAACCCCATTTGTGGCAGACGATCGCGCGCACGTTGTGCCCAAGGGCGTGCCGGAGCTGTTCATCAGCGCCTTCGCGCCGGCTGACTACATGGAAACGGTAAACACCGAGGGCATGCCGTACTACTCCAAGCTGGAGATGATGAAGTTCGGCAAGGGCGTAGAAGGCGAGGCGCAATCCAACCCGCTGCACCTCTGCACCCGTCCAGCCTCTGTTCGCGAAGTGACGATCTGA

Protein sequences of DBSCAN-SWA_2

>NC_015556|1560861:1569273|1564912_1566376_+|WP_157139330.1|portal|DBSCAN-SWA
MMGYRIRAKPARLQVVNSYEGAGQGRRAQSWDAPDAALNTIAIPALPTLRKRSKAAVRNNPWAASGIGKRVSSLIGTGITPRAQIKDEALRSAINQLWSDWTDESDADNLTDFYGQQALIARMVEESGECFVRLRYRRPEDGLAVPLQLQILPPEFVPLDRNFVTRRGNVVRAGIEFDQVGRRVAYWMWKNHPGDARALGTSYNTLNRIPASEVLHIFEPLEGGQLRGIPRLAPVLLRLKSLDNYDDAVLFRQELANLFAGFITKPRPDGPPAIDTLTGQPVQADSDGTPMVAMEPGTMQELLEGEEVVFSEPPGAGDTYVDFMKQQLMAAAAGIELPYELLTGDMADISDRVLRVLLNEFRRRIEQLQFSVYVFQLCRPVRAAWLDTAWLSGAIQLPDYQAKRRAYLRTRWVPQGWAYMHPVQDVQGKLLEIKGGMASRSEHALRSGYDAEVIDQENADDNARAEKLGLNYTTDTADLAGQKEETQ
>NC_015556|1560861:1569273|1562712_1564683_+|WP_013790555.1|terminase|DBSCAN-SWA
MQHPYADGAATYRAAYLRGLHLDPELWIDQWADHYQRIPKDTGAAEPGKYHTDRTPFAREPMRCLSPLHPCKRVVTMVASQMMKTQIALNWIGGNVHMAPANILALLPSEKLARRVSSRIDKTIKAVPELKERVAKPRSRDARNTLDTKEFEGGTLYCTTAGSAANLAELAARYIYGDEIDRWDVDVDSEGDPIELAEARGTTFGRKAKFYFSSSPTIKGASRIDDLYEQSDKRRYFVPCPHCGQNQVLEWANLKWTDDYKRVDYLCSNAECGALIEEHHKTAMLLAGEWRATATGDGETVGFHLNALYSPLGWLSWQSLAKQYDKAKAAADRGDNEPMQVFYNTRLALVWDAAQEMTKADELKKRAEDYRLGTVPAGALILTAAVDVQHNRLELLVIGWGEGLERWVVDYVVVPGDPAVQRTWLDLDEQLKRRYRHASGVELAICATAVDSGGHHTDEVYQFTRLRRWRKVFAVKGASKPGRPVLAQRPSKVDVTYNGQTEKQGAELWIIGTDTAKDWIYNRYPFADGPGALHFSTDLPDEFYAQAVAERKITVYVKGYKRTVWVKGKAERNEVLDLLVYNQAAAQFLGLHRYHLGEWSKLRAAVSQGSLFAQPAASSNVAALQEETVKAASPPPPKPAPQPTARRVSRSAYLKR
>NC_015556|1560861:1569273|1561171_1561963_+|WP_013790553.1|DBSCAN-SWA
MRGSITAGDLDDALAALRQLEPKLANAALADALNHTLNQAAPLVRAEMRDVFDRPTPFTLNSIRKINARPNNLEAALWIKDDKDGAATGKQFAPEDWVAPQVFGGGRQQRASETWLRQAGILPSGLFAVPGAGARLDQYGNMQRGHMMQILSGLKALNRSGSDHSATASRRSLRKGHALAFFVMKRGKTPIGIAERRGKSVSMVIAFVRQPQYRERLDFHGVVRRVAENDAQLEANIDKAIADALSGRLPTSFSRRPGGRRAG
>NC_015556|1560861:1569273|1566375_1567572_+|WP_157139331.1|protease|DBSCAN-SWA
MKMTNRLALAVMLGGLGIDAFAQPRMLNLEGAPDLHAEHWYSIRAAGEEGAKPIEVYIYGEIGFWGVTSGDFIRDLKEIDDGVSEVHVHFDTIGGDLFDGIAIHNALRALGERCTGVIDGACFSAGSVAVCGAHQVRMADNAMLMIHNPWTYMAGDSNELRQMADMMDKASEGIVASYQHRALNIDDAELRRMINDTTWLTASEAKTHGFVDEVFGEVSPLVNNAALGKILNRYRNVPEAALRLVGEVEPAAPEPEPAPAPEPDPVPATPEAAELAAKLATDCAQAGLSNCVSYLIKASALASADAVQSHFNRAKDVRAACLVANLPDDAQGLIEAGLNGDQARAKLFDKLAASSSKVEISNLPPVDDGPQAGAHQPPAPSEVYARRRKQASKGGNNA
>NC_015556|1560861:1569273|1564697_1564916_+|WP_013790556.1|DBSCAN-SWA
MASAQERLDEVRASIQDILTKGQSVSKGDRRLDRAALASLRMLEEQYAAEAAREARVGRPRQIRLYTRGKGA
>NC_015556|1560861:1569273|1560861_1561182_+|WP_013790552.1|holin|DBSCAN-SWA
MASLIMTQATFWLCVVLFVRLFTFQRGALRFRRAMSCLAYLAMASAGAAVIHILQGDLVLPGHAWPLVVLLAIFTGLVLRARGNLAAVLRPGAGWNGLERRRSNEG
>NC_015556|1560861:1569273|1568274_1569273_+|WP_013790560.1|capsid|DBSCAN-SWA
MAEISIFQDEAFGVDALLTVINEDHVLPGQVAAAGLFEEQGVASTVVQIEKDGMTLALVKAAPRGAPGQAVTGDKRSLIPFNTVHLPQTFNILADEIQGIRAVGSLTELMQVQAYVARRIEKARRQLDLTHEFQRIGAIKGQVVDADGQTVLFDIFQRFDIKRPEVVSLELDSPDTDVSAKCAEILDAQDDALGNTTSSGAHAYCGKTLWAKLIAHKSVREAYLNWQAAAQLMGDRRQPFEFGGITWERYKGKIGKTPFVADDRAHVVPKGVPELFISAFAPADYMETVNTEGMPYYSKLEMMKFGKGVEGEAQSNPLHLCTRPASVREVTI
>NC_015556|1560861:1569273|1562128_1562710_+|WP_013790554.1|DBSCAN-SWA
MAVMSKAEFADSRGWSRPYVSKLVSQGRLVLTDDGKKIDVEASLALLGETADPSKAGVAERHQRDRAEKGVHALVSPLAPPSTAPGGGGGDSYQKARAHRETYLALLAEDEFLKGRGELVERKAVDTAAFNTARTVRDLFLGLPPKIAGELIAITDTWEMERKLTELFRGVLEDAASLVQLDAEIEQGTKEPN
>NC_015556|1560861:1569273|1567568_1568204_+|WP_013790559.1|head|DBSCAN-SWA
MTIKTEGVYAGEFLLSEANGSRSREEVVIAAGSGILKAGTLIALLTAANAAQVTADAGNTGNGLLNGISVTSAAVSGTYVVEITSAPAAGAKFAVLDLAGKEVGEGVVGTQFVSPGLSFDLTEGATKFVKGDKFTLMVNANLGEYTAYDDDGTDDGRRAASGILYASVDATLTDVRAVGVMRDAEVIESLLTGMDANGRADLLAKGIVIRT

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013790552.1|1560861_1561182_+|holin	phage holin family protein	NA	NA	NA	NA
WP_013790553.1|1561171_1561963_+	hypothetical protein	A0A1B0Z000	Pseudomonas_phage	2.0e-46	44.3
WP_013790554.1|1562128_1562710_+	hypothetical protein	A0A2H4JG15	uncultured_Caudovirales_phage	1.6e-45	56.3
WP_013790555.1|1562712_1564683_+|terminase	phage terminase large subunit family protein	A0A2H4J898	uncultured_Caudovirales_phage	7.1e-266	67.9
WP_013790556.1|1564697_1564916_+	hypothetical protein	NA	NA	NA	NA
WP_157139330.1|1564912_1566376_+|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	6.6e-176	66.4
WP_157139331.1|1566375_1567572_+|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	2.3e-78	46.2
WP_013790559.1|1567568_1568204_+|head	head decoration protein	NA	NA	NA	NA
WP_013790560.1|1568274_1569273_+|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	3.9e-111	59.6

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>NC_015556|1583726:1589099|DBSCAN-SWA
CATGACATTGAATGAGATCCGCCTCGGCCCGCTGGCCCAGGCGCTCGCGCTGCTGCCTGCGCGTATGAAAAGCGATGCCGCCGAGATCCAGGTGCTGGCCACCACCCTGCAGGAATCGCCGAACCGCGAGCAGTGCCAGTTGCCGATCCGCCCAGGCAAGTGCGGCCCGGCCCGCGGCATCGCTCAGTTCGAGCTTGGCGGCGGTGTCCGTGGTGTGCTGAACCACCCTGCATCGCGCCCCCACGTCCTTACCGTCTGCGCGGCCTTGGGCGTGGAGCCGACCGAGCAGGCCATCTTCGACGCGCTGCCCACGCAAGACGACGTGCTCGATTGCGCGCTGGCCCGGCTGCTGTATTGGACGGACTCGCGACCGCTGCCGGCCGTTGGTGATGTTGCCGGTGCGTGGGAGTACTACCTGCGCAACTGGCGGCCTGGTGCTTACAGCCGCGGCACCGCTGAGCAGCGCGGCCAGCTGCGCAAGAAGTGGACGGTCAACTACGCCATGGCGCTCGACGTGGTGCGGGGAGCGCAGGCATGAACTGGCTGAGGCTGGTTCCTTCATGGTGCTGGTGGCTGCTCGCAGTAGCGGTAGCCGCCGGCGGACAGCAGATCCGCGTGGCCGGCCTGCAGACGGAGCTGGATGCCGAGCGCACGGCGTCGACCGAGCAGTACGGCAAGCTGGTGGCCTGCCGCGAGACCCGCGGCAATCTGCTGGTACAGGTCGGCGAGCAGAACACCGCCCTAGCTGATCTGCGCGCCACGGCCGCTGCACGAGCACAGCAGGCCGAGCAGGCCCAGGCCGGCGCCCGGCAGCAATCCGAAGCCGACTACCGGGCGGCCAACCGGCTGCAGCAGGAACGCACCGGCGGCGAAGCCTGCGCCGCGGCTACGAGCGTGATCGATAAGGAGCTGAGTCTATGAGGCTGATCCTACTTGTCGTCCTAGCGGGACTGGCCGGCTGTGCAGCGAAGCCACCAGCGGAGCCTGAAACCCGCATCGTGCGCGTCGAGGTGCCGATCGAGGTGCCGTGCCGCACGAAGGAAGTAGCCGTGCCGCCTTGGGCCGCTTCCGGCCTGAAGGCTGACGACAGCTTGGAAGTGAAGGTGCGGGCGCTGCTTGCTGAGCGCCGCCAGCGGATCGGCTATGAGCGTGAGTTGCTGGCGGCGAATGAGGCATGCCGTTAGCCGTCTGCTATTTCCGTTCCAGAACCACGGTGCTGTTGCGCAGGTGGCTTTCCAGCTTGCCTTCCGGCGTGAGCACCAGGCGGACTTCCTTGGTGTTCGCGTCTATCAAGGTAGTTTCGGATTCTGGGGTGAGTGCAAACGCGATCTCGCCAAACATTTCTGGCTCAGTGTTGGATGTGGCGCGGTAGCCGTCGCCTGTTTTGACGACCTCGATCGTTTCGGTAACCGAGCCTTTATCGGCAAACCAAGTACCAACGAACTCGGCGCCTTTGTCGTCGCAGGCGCTGATGAGGAGGGTGGAGGCAATTACGAGTAGTAGTTTTTTCATGTGACGTCCCTGTTATCCAGCAGAGTTTATCGAGGCGCGAAGCTTACTTGATTGCCGACGGCAGGTAAGCCTCCCGCGTCTCGCTCTCATGATTGAAGAGAGGCGACGAGCCCAGGTGCGCCAACACCTGGGCTCGACACCTGACCCGCAGAACGACCCTGCAAGCCAAGCCATGGCCTCCGCCTCGTGCACGAAGCGCGGCGAGCCTAGCACCTGTTTATCCATACAGTAAAGGTTTGCACTTAATGACCAATCCGATCATCCCGTGGATGGGCGGCAAGCGCCGTCTTGCCGATCGCCTTATCCCTCTGTTCCCGCCTCACGAATGCTATGTCGAAGTGTTCGCCGGGGGCGCGGCCCTGTTCTTCATGCGTCCTCAACCAGCCCCGGTCGAGGTGCTGAACGACATCAACGGCGACTTGGTGTCGCTGTATCGCGTTGTCCAAAACCACCTCGAGGAATTCGTGCGCCAGTTCAAATGGGCGCTGACCAGCCGCCAGCTATTCGAGTGGCACAAGGTCGCCCGGCCGGAGACGCTGACCGACATCCAGCGCGCCGCGCGCTTCTTCTACCTGCAGCACAACGCATTCGGCGGCAAGGTATCCGGACAGACGTTTGGCACGGCCACCACCGCCCCAGGCTTCAGCGTGATGCGCATCGAGGAGAATCTCACGGCAGCCTGGCAGCGCCTGGCCGGCACCTACGTCGAGAACCTGAGCTGGCTCGAATGCGCCGAGCGTTACGACCGCGCGCACACCTTCCACTACATGGATCCGCCGTACTGGAAAACCGAGGGCTATGGGGTGGGCTTCCCATTCGAAGAATACGAGCGGATGGCCGACTTTATGAGGCGCTGTAAAGGAAAGGTGATGGTGAGCATCAACGACCACCCGGACATCCGCCGCGTGTTCGAAGGCTTTCACATGGAGCAGCTGGATATCAGATACAGCTGCACAAACCAGCGGCAGGGCCTAGCCGAGAAGACCGGCGAGCTGGTGATCATGAACTGGGAGCCGTCGGCGCTCGGCGGGTTGTTCTAGCCGGGTAGGGCGTATACTGCGCTCTTTTCGCGAGGGGCAGCTCATGCTCAATATCTACAGCTCCAATTGGGGCGTGGTGCTGGATAAGCAGCTCGGCACGCAGCAGGGCGTCTCGATTTGGGAGTTCCACCGAGCGGCGTCCTCAGTCGCTCGTGACCAAGGCCGGCGCACATATAGATACGCTCGCATCAAGCCGGCAGAGCCTAAGGATGGCCAGGAAGTGGAAGTCACTTTGATGCTGACCCCATCATCTCCTGAATCCGACTGGTTACCCCTCGGCGTGGCGACTGCTCGCACCATCAATAGCATCTGACCGCCGCGTCTAGAGCAGCGGGTTATCGATCTTCTTGATCAGCTCGGGGCCGTGGTTCTTCACGTTACCCACCGCTCTATCGACTGGATACCATTCGAACGCCTCCACGGGGGTGTCGTGGTGTCTGGCCAGGTCTTCGGCCCGCTCAGGTAGCAGGCCGGGCTCCAGCCATTCCCTCGCAACATCTGGCGGCAGCACGACAGGTCGCCTGTCGTGGATGTCGACCATCCCTTCATCGCTGGCGGCGGTGATGATCGCAAAGCCGCCCGCGCCTTCCTCTCCGTCCTGTGGTATGTCGGCGATGCCGGCGAAGAATGCCGGGGCGCCGCCTTTCAGCCGGATGAAATACGGCTGCTTGACCTTCGGGTTGTCTGGATCCTTTTTCCACTCGTACCAACCATCCGCCGGAATGATCACGCGTCCCTTCTTCCAGATCGCACCCCAGAACCGACTGGTGGCGGCGGTCTCGATGCGCGCGTTGATCGCGGGCGGCCGCTTGCCGTCTGCCCAGTGCGGGGCATAGCCCCATTGGGTTCGAGTCGCATGCGTGCCCCGGTCATCCTGATGCAGCAGCAGGACGCGGGACTGTGGCGCCACGTTGTAGCGTGCAAGGGGCTCGTTCGACCAGTCGCCCTCGAGCAGGCCCAGCTGCAGAGCCTTCGCGTATTCGTCGACAGTTCGGTACTGCGTGAATCGTCCGCACATAAAACTCTCCAGTCGTCAGATGGCCATCATCAGTCTTTGACCGCGGCACGGGCGTTTTGGTATCTGTATATCTATACAGTGTTATTCCTGAGTTCCGTCATGGGCAATGCATCCTTTCTCTGTCTCCTCAAAAGCTCCTCCGCCGTGCTGCCTTTTCTGTCGGCCCGCGTGCCAGCCGGCATGGGCTTCCCCAGTCCAGCGGCCGACCACATAGAGCGCAAGGTGTCACTTGATGAGCTGCTCGATATCGACGCCCCCCAGACATACCTCGTGCGTGCGCACGGTGAAAGCATGACCGGGGTGGGAATCTTTCACGACGATGTGATGGTCGTGAACCGGGCGCTGGACGCCGGGCCGGGCGACGTTGTGATCGCAGCTATCAACGGTGACACGCTGGTGAAGACGTTCTGCCGGGAGGGCGATCAGATCATTCTCCGCTCGGAGAACCCCAAATACGCGCCTAGGTACGTGTTGGAGGGCGACGAGCTTATGGTGTGGGGAGTGGTAATCACCAACCTGCGGAGCCTTCGCCAATATGGCTGACTCGGCGATCGCGCTAATCGACTGCAACAGCTTCTATTGCAGTTGCGAAAGGGTATTCAGGCCGGATCTTCAGCACGTGCCGCTGGTGGTGCTGAGCAACAACGACGGCTGCGTGATTGCCAGGTCAGCAGATGCCAAGCCATTCGTGGCGATGGGCGATCCCTACCACCTGATCAAGGGCGTATTGAGGCGGCACGGTATCGTGCCGTTCAGCAGCAACTATGCCTTGTACGGCGACATGAGTGAGCGCGTGATGACGGTCATCGAGTCGATGGTGCCCGAGGTCGAGGTGTACAGCATCGATGAAGCCTTTGCTGACCTCACCGGTGTGCCTGGCGACCTCGAGCAGCTCGGCCGGCAGATCCGCGCACGGGTGCTGAAACACACCGGGATACCGACCGGCGTGGGAATCGGCCCCACCAAGACGCTGGCCAAGCTGGCGAACCATTGCGCGAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTCGATCTGCGTGACCCGGTGCGCCGTGACAAGGCGCTGAAGGTTCTACCCGTCAGCGACGTGTGGGGCATCGGCCGGCGGATGACCGAGAACCTCGACAAGTTGAAGATCACAACCGCATGGGATCTTGCCCAAGCTGATGCCTGGACGCTGCGCAAGCAGTTCAGCGTGGTGGTCGAGAAGACTGCGCGCGAGCTGCGTGGTACACCGTGCCTGCAAGTCGATGACCAGGTGCAGGCGAAACAGGAGATCTGCTCGAGCAGGATGTTCGGCATCCGCCTGGAGCGGATCGAGCCGATCCGGGAGGCGGTGGCCACGTACGCGGCCACCGCGTGCGAAAAGCTCCGCGCTCAGGGCTCAGTGTGCAAGCGGATCCGCGTCGGCATCCGAACGGGGATGCACAACCCTGACGAGCCGAAGTTCGCCCGGGGGATGACCCTCGAACTCCCATACCAGACCGACGATACCCGGATGATCACCCACTACGCGCTGCTGGCCCTGGAGCAGATCTACCGTAAGGGGTATTCGTTCTCGAAGGCCGAGGTGATGTTGCTCGAGCTGTGCCAGCGCAACGAGTTCACCTCCGACCTGTTCGCGCCCCAGCAGCCACACGAGAGCACCAAGGTAATGGCAGTGTTCGACGAGATCAATGCGAAGTGGGGGAGAGGTACGCTGCGACCTGGCCGGGTGGAACTCAATCCAGAGTGGGGCATGAAGCGGGAGATGCTGAGCCAGAGCTACACAACTCGGTGGGATCAGTTGCTAAGCGCGAGGTAG

Protein sequences of DBSCAN-SWA_3

>NC_015556|1583726:1589099|1586599_1587295_-|WP_013790581.1|DBSCAN-SWA
MCGRFTQYRTVDEYAKALQLGLLEGDWSNEPLARYNVAPQSRVLLLHQDDRGTHATRTQWGYAPHWADGKRPPAINARIETAATSRFWGAIWKKGRVIIPADGWYEWKKDPDNPKVKQPYFIRLKGGAPAFFAGIADIPQDGEEGAGGFAIITAASDEGMVDIHDRRPVVLPPDVAREWLEPGLLPERAEDLARHHDTPVEAFEWYPVDRAVGNVKNHGPELIKKIDNPLL
>NC_015556|1583726:1589099|1586320_1586590_+|WP_013790580.1|DBSCAN-SWA
MLNIYSSNWGVVLDKQLGTQQGVSIWEFHRAASSVARDQGRRTYRYARIKPAEPKDGQEVEVTLMLTPSSPESDWLPLGVATARTINSI
>NC_015556|1583726:1589099|1587830_1589099_+|WP_013790583.1|DBSCAN-SWA
MADSAIALIDCNSFYCSCERVFRPDLQHVPLVVLSNNDGCVIARSADAKPFVAMGDPYHLIKGVLRRHGIVPFSSNYALYGDMSERVMTVIESMVPEVEVYSIDEAFADLTGVPGDLEQLGRQIRARVLKHTGIPTGVGIGPTKTLAKLANHCAKKWQRQTGGVVDLRDPVRRDKALKVLPVSDVWGIGRRMTENLDKLKITTAWDLAQADAWTLRKQFSVVVEKTARELRGTPCLQVDDQVQAKQEICSSRMFGIRLERIEPIREAVATYAATACEKLRAQGSVCKRIRVGIRTGMHNPDEPKFARGMTLELPYQTDDTRMITHYALLALEQIYRKGYSFSKAEVMLLELCQRNEFTSDLFAPQQPHESTKVMAVFDEINAKWGRGTLRPGRVELNPEWGMKREMLSQSYTTRWDQLLSAR
>NC_015556|1583726:1589099|1585482_1586277_+|WP_013790579.1|DBSCAN-SWA
MTNPIIPWMGGKRRLADRLIPLFPPHECYVEVFAGGAALFFMRPQPAPVEVLNDINGDLVSLYRVVQNHLEEFVRQFKWALTSRQLFEWHKVARPETLTDIQRAARFFYLQHNAFGGKVSGQTFGTATTAPGFSVMRIEENLTAAWQRLAGTYVENLSWLECAERYDRAHTFHYMDPPYWKTEGYGVGFPFEEYERMADFMRRCKGKVMVSINDHPDIRRVFEGFHMEQLDIRYSCTNQRQGLAEKTGELVIMNWEPSALGGLF
>NC_015556|1583726:1589099|1587394_1587838_+|WP_013790582.1|DBSCAN-SWA
MGNASFLCLLKSSSAVLPFLSARVPAGMGFPSPAADHIERKVSLDELLDIDAPQTYLVRAHGESMTGVGIFHDDVMVVNRALDAGPGDVVIAAINGDTLVKTFCREGDQIILRSENPKYAPRYVLEGDELMVWGVVITNLRSLRQYG
>NC_015556|1583726:1589099|1583726_1584263_+|WP_013790575.1|DBSCAN-SWA
MTLNEIRLGPLAQALALLPARMKSDAAEIQVLATTLQESPNREQCQLPIRPGKCGPARGIAQFELGGGVRGVLNHPASRPHVLTVCAALGVEPTEQAIFDALPTQDDVLDCALARLLYWTDSRPLPAVGDVAGAWEYYLRNWRPGAYSRGTAEQRGQLRKKWTVNYAMALDVVRGAQA
>NC_015556|1583726:1589099|1584259_1584646_+|WP_013790576.1|DBSCAN-SWA
MNWLRLVPSWCWWLLAVAVAAGGQQIRVAGLQTELDAERTASTEQYGKLVACRETRGNLLVQVGEQNTALADLRATAAARAQQAEQAQAGARQQSEADYRAANRLQQERTGGEACAAATSVIDKELSL
>NC_015556|1583726:1589099|1584642_1584909_+|WP_013790577.1|DBSCAN-SWA
MRLILLVVLAGLAGCAAKPPAEPETRIVRVEVPIEVPCRTKEVAVPPWAASGLKADDSLEVKVRALLAERRQRIGYERELLAANEACR
>NC_015556|1583726:1589099|1584916_1585237_-|WP_013790578.1|DBSCAN-SWA
MKKLLLVIASTLLISACDDKGAEFVGTWFADKGSVTETIEVVKTGDGYRATSNTEPEMFGEIAFALTPESETTLIDANTKEVRLVLTPEGKLESHLRNSTVVLERK

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013790575.1|1583726_1584263_+	hypothetical protein	A0A2H4JFP9	uncultured_Caudovirales_phage	3.3e-32	47.7
WP_013790576.1|1584259_1584646_+	hypothetical protein	NA	NA	NA	NA
WP_013790577.1|1584642_1584909_+	hypothetical protein	A0A2H4J8E9	uncultured_Caudovirales_phage	1.8e-23	64.8
WP_013790578.1|1584916_1585237_-	hypothetical protein	NA	NA	NA	NA
WP_013790579.1|1585482_1586277_+	DNA adenine methylase	C7BGE1	Burkholderia_phage	8.4e-101	65.0
WP_013790580.1|1586320_1586590_+	hypothetical protein	B5WZU6	Pseudomonas_phage	6.3e-08	41.0
WP_013790581.1|1586599_1587295_-	hypothetical protein	A0A2H4J5W2	uncultured_Caudovirales_phage	7.0e-59	49.3
WP_013790582.1|1587394_1587838_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	3.0e-15	40.0
WP_013790583.1|1587830_1589099_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	4.2e-110	50.1