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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_017272 Thermus thermophilus SG0.5JP17-16, complete genome 2 crisprs cas6,DEDDh,csa3,cas3,Cas9_archaeal 0 0 0 0
NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 7 crisprs cas7,csb2gr5,cas3,cas8u1,cas2,cas1,cas4,cas8b5,cas5,cas6,cas8c,cas7b,csa3 1 69 3 0

Results visualization

1. NC_017272
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017272_1 537373-537480 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017272_2 1543969-1544074 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_017273
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017273_1 102879-103876 Unclear NA
13 spacers
cas8u1,cas3,csb2gr5,cas7

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017273_2 116844-117310 Unclear NA
6 spacers
cas2,cas1,cas4,cas8b5,cas5,cas3,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017273_3 128169-128930 Unclear NA
10 spacers
cas6,cas3,cas5,cas8b5,cas4,cas1,cas2

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017273_4 136049-136163 Unclear III-A
1 spacers
cas6,cas3,cas5

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017273_5 172053-172528 TypeI I-C,III-B
6 spacers
cas3,cas5,cas8c,cas7b,cas4,cas1,cas2

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017273_6 180589-181953 TypeI I-C,III-B
18 spacers
cas2,cas1,cas4,cas7b,cas8c,cas5,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017273_7 265744-265948 Orphan NA
3 spacers
csa3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_017273_7 7.2|265838|19|NC_017273|CRT 265838-265856 19 NC_017273.1 265725-265743 0 1.0

1. spacer 7.2|265838|19|NC_017273|CRT matches to position: 265725-265743, mismatch: 0, identity: 1.0

gtgttggccccctccccta	CRISPR spacer
gtgttggccccctccccta	Protospacer
*******************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_017273_1 1.1|102916|38|NC_017273|CRISPRCasFinder,CRT 102916-102953 38 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 102916-102953 0 1.0
NC_017273_1 1.2|102991|36|NC_017273|CRISPRCasFinder,CRT 102991-103026 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 102991-103026 0 1.0
NC_017273_1 1.3|103064|38|NC_017273|CRISPRCasFinder,CRT 103064-103101 38 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103064-103101 0 1.0
NC_017273_1 1.4|103139|35|NC_017273|CRISPRCasFinder,CRT 103139-103173 35 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103139-103173 0 1.0
NC_017273_1 1.5|103211|38|NC_017273|CRISPRCasFinder,CRT 103211-103248 38 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103211-103248 0 1.0
NC_017273_1 1.6|103286|38|NC_017273|CRISPRCasFinder,CRT 103286-103323 38 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103286-103323 0 1.0
NC_017273_1 1.7|103361|37|NC_017273|CRISPRCasFinder,CRT 103361-103397 37 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103361-103397 0 1.0
NC_017273_1 1.8|103435|36|NC_017273|CRISPRCasFinder,CRT 103435-103470 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103435-103470 0 1.0
NC_017273_1 1.9|103508|38|NC_017273|CRISPRCasFinder,CRT 103508-103545 38 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103508-103545 0 1.0
NC_017273_1 1.10|103583|36|NC_017273|CRISPRCasFinder,CRT 103583-103618 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103583-103618 0 1.0
NC_017273_1 1.11|103656|38|NC_017273|CRISPRCasFinder,CRT 103656-103693 38 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103656-103693 0 1.0
NC_017273_1 1.12|103731|35|NC_017273|CRISPRCasFinder,CRT 103731-103765 35 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103731-103765 0 1.0
NC_017273_1 1.13|103803|37|NC_017273|CRISPRCasFinder,CRT 103803-103839 37 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103803-103839 0 1.0
NC_017273_1 1.14|102916|42|NC_017273|PILER-CR 102916-102957 42 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 102916-102957 0 1.0
NC_017273_1 1.15|102991|40|NC_017273|PILER-CR 102991-103030 40 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 102991-103030 0 1.0
NC_017273_1 1.16|103064|42|NC_017273|PILER-CR 103064-103105 42 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103064-103105 0 1.0
NC_017273_1 1.17|103139|39|NC_017273|PILER-CR 103139-103177 39 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103139-103177 0 1.0
NC_017273_1 1.18|103211|42|NC_017273|PILER-CR 103211-103252 42 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103211-103252 0 1.0
NC_017273_1 1.19|103286|42|NC_017273|PILER-CR 103286-103327 42 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103286-103327 0 1.0
NC_017273_1 1.20|103361|41|NC_017273|PILER-CR 103361-103401 41 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103361-103401 0 1.0
NC_017273_1 1.21|103435|40|NC_017273|PILER-CR 103435-103474 40 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103435-103474 0 1.0
NC_017273_1 1.22|103508|42|NC_017273|PILER-CR 103508-103549 42 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103508-103549 0 1.0
NC_017273_1 1.23|103583|40|NC_017273|PILER-CR 103583-103622 40 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103583-103622 0 1.0
NC_017273_1 1.24|103656|42|NC_017273|PILER-CR 103656-103697 42 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103656-103697 0 1.0
NC_017273_1 1.25|103731|39|NC_017273|PILER-CR 103731-103769 39 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103731-103769 0 1.0
NC_017273_1 1.26|103803|41|NC_017273|PILER-CR 103803-103843 41 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 103803-103843 0 1.0
NC_017273_2 2.1|116880|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 116880-116915 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 116880-116915 0 1.0
NC_017273_2 2.2|116952|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 116952-116987 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 116952-116987 0 1.0
NC_017273_2 2.3|117024|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 117024-117059 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 117024-117059 0 1.0
NC_017273_2 2.4|117096|35|NC_017273|PILER-CR,CRISPRCasFinder,CRT 117096-117130 35 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 117096-117130 0 1.0
NC_017273_2 2.5|117167|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 117167-117202 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 117167-117202 0 1.0
NC_017273_2 2.6|117239|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 117239-117274 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 117239-117274 0 1.0
NC_017273_3 3.1|128205|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 128205-128240 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 128205-128240 0 1.0
NC_017273_3 3.2|128277|38|NC_017273|PILER-CR,CRISPRCasFinder,CRT 128277-128314 38 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 128277-128314 0 1.0
NC_017273_3 3.3|128351|37|NC_017273|PILER-CR,CRISPRCasFinder,CRT 128351-128387 37 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 128351-128387 0 1.0
NC_017273_3 3.4|128424|37|NC_017273|PILER-CR,CRISPRCasFinder,CRT 128424-128460 37 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 128424-128460 0 1.0
NC_017273_3 3.5|128497|37|NC_017273|PILER-CR,CRISPRCasFinder,CRT 128497-128533 37 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 128497-128533 0 1.0
NC_017273_3 3.6|128570|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 128570-128605 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 128570-128605 0 1.0
NC_017273_3 3.7|128642|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 128642-128677 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 128642-128677 0 1.0
NC_017273_3 3.8|128714|35|NC_017273|PILER-CR,CRISPRCasFinder,CRT 128714-128748 35 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 128714-128748 0 1.0
NC_017273_3 3.9|128785|38|NC_017273|PILER-CR,CRISPRCasFinder,CRT 128785-128822 38 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 128785-128822 0 1.0
NC_017273_3 3.10|128859|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 128859-128894 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 128859-128894 0 1.0
NC_017273_4 4.1|136081|51|NC_017273|CRISPRCasFinder 136081-136131 51 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 136081-136131 0 1.0
NC_017273_5 5.1|172090|33|NC_017273|CRISPRCasFinder,CRT 172090-172122 33 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 172090-172122 0 1.0
NC_017273_5 5.2|172160|38|NC_017273|CRISPRCasFinder,CRT,PILER-CR 172160-172197 38 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 172160-172197 0 1.0
NC_017273_5 5.3|172235|35|NC_017273|CRISPRCasFinder,CRT,PILER-CR 172235-172269 35 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 172235-172269 0 1.0
NC_017273_5 5.4|172307|37|NC_017273|CRISPRCasFinder,CRT,PILER-CR 172307-172343 37 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 172307-172343 0 1.0
NC_017273_5 5.5|172381|39|NC_017273|CRISPRCasFinder,CRT,PILER-CR 172381-172419 39 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 172381-172419 0 1.0
NC_017273_5 5.6|172457|35|NC_017273|CRISPRCasFinder,CRT,PILER-CR 172457-172491 35 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 172457-172491 0 1.0
NC_017273_6 6.1|180626|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 180626-180661 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 180626-180661 0 1.0
NC_017273_6 6.2|180699|39|NC_017273|PILER-CR,CRISPRCasFinder,CRT 180699-180737 39 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 180699-180737 0 1.0
NC_017273_6 6.3|180775|35|NC_017273|PILER-CR,CRISPRCasFinder,CRT 180775-180809 35 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 180775-180809 0 1.0
NC_017273_6 6.4|180847|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 180847-180882 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 180847-180882 0 1.0
NC_017273_6 6.5|180920|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 180920-180955 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 180920-180955 0 1.0
NC_017273_6 6.6|180993|40|NC_017273|PILER-CR,CRISPRCasFinder,CRT 180993-181032 40 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 180993-181032 0 1.0
NC_017273_6 6.7|181070|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 181070-181105 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 181070-181105 0 1.0
NC_017273_6 6.8|181143|35|NC_017273|PILER-CR,CRISPRCasFinder,CRT 181143-181177 35 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 181143-181177 0 1.0
NC_017273_6 6.9|181215|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 181215-181250 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 181215-181250 0 1.0
NC_017273_6 6.10|181288|39|NC_017273|PILER-CR,CRISPRCasFinder,CRT 181288-181326 39 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 181288-181326 0 1.0
NC_017273_6 6.11|181364|37|NC_017273|PILER-CR,CRISPRCasFinder,CRT 181364-181400 37 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 181364-181400 0 1.0
NC_017273_6 6.12|181438|38|NC_017273|PILER-CR,CRISPRCasFinder,CRT 181438-181475 38 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 181438-181475 0 1.0
NC_017273_6 6.13|181513|35|NC_017273|PILER-CR,CRISPRCasFinder,CRT 181513-181547 35 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 181513-181547 0 1.0
NC_017273_6 6.14|181585|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 181585-181620 36 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 181585-181620 0 1.0
NC_017273_6 6.15|181658|38|NC_017273|PILER-CR,CRISPRCasFinder,CRT 181658-181695 38 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 181658-181695 0 1.0
NC_017273_6 6.16|181733|37|NC_017273|PILER-CR,CRISPRCasFinder,CRT 181733-181769 37 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 181733-181769 0 1.0
NC_017273_6 6.17|181807|38|NC_017273|PILER-CR,CRISPRCasFinder,CRT 181807-181844 38 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 181807-181844 0 1.0
NC_017273_6 6.18|181882|35|NC_017273|CRISPRCasFinder,CRT 181882-181916 35 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 181882-181916 0 1.0
NC_017273_7 7.1|265781|20|NC_017273|CRT 265781-265800 20 NC_006462 Thermus thermophilus HB8 plasmid pTT27, complete sequence 113638-113657 0 1.0
NC_017273_7 7.1|265781|20|NC_017273|CRT 265781-265800 20 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 265781-265800 0 1.0
NC_017273_7 7.2|265838|19|NC_017273|CRT 265838-265856 19 NZ_CP014142 Thermus parvatiensis strain RL plasmid pTP143, complete sequence 119680-119698 0 1.0
NC_017273_7 7.2|265838|19|NC_017273|CRT 265838-265856 19 NC_005838 Thermus thermophilus HB27 plasmid pTT27, complete sequence 81077-81095 0 1.0
NC_017273_7 7.2|265838|19|NC_017273|CRT 265838-265856 19 NC_005838 Thermus thermophilus HB27 plasmid pTT27, complete sequence 81190-81208 0 1.0
NC_017273_7 7.2|265838|19|NC_017273|CRT 265838-265856 19 NZ_AP019802 Thermus thermophilus strain HC11 plasmid pHC11, complete sequence 239088-239106 0 1.0
NC_017273_7 7.2|265838|19|NC_017273|CRT 265838-265856 19 NZ_AP019802 Thermus thermophilus strain HC11 plasmid pHC11, complete sequence 239201-239219 0 1.0
NC_017273_7 7.2|265838|19|NC_017273|CRT 265838-265856 19 NC_017588 Thermus thermophilus JL-18 plasmid pTTJL1801, complete sequence 224549-224567 0 1.0
NC_017273_7 7.2|265838|19|NC_017273|CRT 265838-265856 19 NC_017588 Thermus thermophilus JL-18 plasmid pTTJL1801, complete sequence 224662-224680 0 1.0
NC_017273_7 7.2|265838|19|NC_017273|CRT 265838-265856 19 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 265725-265743 0 1.0
NC_017273_7 7.2|265838|19|NC_017273|CRT 265838-265856 19 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 265838-265856 0 1.0
NC_017273_7 7.2|265838|19|NC_017273|CRT 265838-265856 19 NZ_AP019795 Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence 124039-124057 0 1.0
NC_017273_7 7.2|265838|19|NC_017273|CRT 265838-265856 19 NZ_AP019795 Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence 124152-124170 0 1.0
NC_017273_7 7.2|265838|19|NC_017273|CRT 265838-265856 19 NZ_LR027520 Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence 184013-184031 0 1.0
NC_017273_7 7.2|265838|19|NC_017273|CRT 265838-265856 19 NZ_AP019793 Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence 153453-153471 0 1.0
NC_017273_7 7.2|265838|19|NC_017273|CRT 265838-265856 19 NZ_AP019793 Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence 153566-153584 0 1.0
NC_017273_2 2.1|116880|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 116880-116915 36 NC_017590 Thermus thermophilus JL-18 plasmid pTTJL1802, complete sequence 17226-17261 3 0.917
NC_017273_1 1.4|103139|35|NC_017273|CRISPRCasFinder,CRT 103139-103173 35 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 1391327-1391361 7 0.8
NC_017273_1 1.4|103139|35|NC_017273|CRISPRCasFinder,CRT 103139-103173 35 NZ_CP032346 Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence 1682318-1682352 7 0.8
NC_017273_1 1.4|103139|35|NC_017273|CRISPRCasFinder,CRT 103139-103173 35 NZ_CP032322 Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence 946505-946539 7 0.8
NC_017273_1 1.4|103139|35|NC_017273|CRISPRCasFinder,CRT 103139-103173 35 NZ_CP007794 Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence 1763164-1763198 7 0.8
NC_017273_6 6.5|180920|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 180920-180955 36 MN694629 Marine virus AFVG_250M263, complete genome 517-552 7 0.806
NC_017273_1 1.4|103139|35|NC_017273|CRISPRCasFinder,CRT 103139-103173 35 NZ_CP040819 Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence 802-836 8 0.771
NC_017273_1 1.4|103139|35|NC_017273|CRISPRCasFinder,CRT 103139-103173 35 NZ_CP040819 Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence 580580-580614 8 0.771
NC_017273_5 5.1|172090|33|NC_017273|CRISPRCasFinder,CRT 172090-172122 33 NC_013858 Azospirillum sp. B510 plasmid pAB510d, complete sequence 321205-321237 9 0.727
NC_017273_6 6.5|180920|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT 180920-180955 36 MN693764 Marine virus AFVG_250M260, complete genome 517-552 9 0.75
NC_017273_6 6.13|181513|35|NC_017273|PILER-CR,CRISPRCasFinder,CRT 181513-181547 35 NZ_CP054841 Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence 144869-144903 11 0.686

1. spacer 1.1|102916|38|NC_017273|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

tggcccgggagcaacgtggacctcatccgggagaagta	CRISPR spacer
tggcccgggagcaacgtggacctcatccgggagaagta	Protospacer
**************************************

2. spacer 1.2|102991|36|NC_017273|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

ctcaccaacggggacgtacaggagggggacctcctc	CRISPR spacer
ctcaccaacggggacgtacaggagggggacctcctc	Protospacer
************************************

3. spacer 1.3|103064|38|NC_017273|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

agcgccttcggcggcgaggaaatgtgcccggcgtgcaa	CRISPR spacer
agcgccttcggcggcgaggaaatgtgcccggcgtgcaa	Protospacer
**************************************

4. spacer 1.4|103139|35|NC_017273|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

cgctctcgacttcgaccgcctcaccggcatcgggg	CRISPR spacer
cgctctcgacttcgaccgcctcaccggcatcgggg	Protospacer
***********************************

5. spacer 1.5|103211|38|NC_017273|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

aaggttctggaggcccacagcctggagtgcattcccta	CRISPR spacer
aaggttctggaggcccacagcctggagtgcattcccta	Protospacer
**************************************

6. spacer 1.6|103286|38|NC_017273|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

tggccgatgcggtgaacgtttacaggggcgcgcaggcc	CRISPR spacer
tggccgatgcggtgaacgtttacaggggcgcgcaggcc	Protospacer
**************************************

7. spacer 1.7|103361|37|NC_017273|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

gtcttcctcgaccccccgtaccggggctacgaggacg	CRISPR spacer
gtcttcctcgaccccccgtaccggggctacgaggacg	Protospacer
*************************************

8. spacer 1.8|103435|36|NC_017273|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

aggttcgggcaagaggtggccgactacgtggaggcc	CRISPR spacer
aggttcgggcaagaggtggccgactacgtggaggcc	Protospacer
************************************

9. spacer 1.9|103508|38|NC_017273|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

gtttgcgggggggtatggggtttggggggtgagccccg	CRISPR spacer
gtttgcgggggggtatggggtttggggggtgagccccg	Protospacer
**************************************

10. spacer 1.10|103583|36|NC_017273|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

cccgaggaggccctgcacgacctcatggtctgggcc	CRISPR spacer
cccgaggaggccctgcacgacctcatggtctgggcc	Protospacer
************************************

11. spacer 1.11|103656|38|NC_017273|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

tgccccagtatggcgatggtcatggcccggtccgccca	CRISPR spacer
tgccccagtatggcgatggtcatggcccggtccgccca	Protospacer
**************************************

12. spacer 1.12|103731|35|NC_017273|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

caggtcatgggaatgtcgtagtggaccagccactc	CRISPR spacer
caggtcatgggaatgtcgtagtggaccagccactc	Protospacer
***********************************

13. spacer 1.13|103803|37|NC_017273|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

cccacggcggctagggcctccctagcccgccccagtt	CRISPR spacer
cccacggcggctagggcctccctagcccgccccagtt	Protospacer
*************************************

14. spacer 1.14|102916|42|NC_017273|PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

tggcccgggagcaacgtggacctcatccgggagaagtagttg	CRISPR spacer
tggcccgggagcaacgtggacctcatccgggagaagtagttg	Protospacer
******************************************

15. spacer 1.15|102991|40|NC_017273|PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

ctcaccaacggggacgtacaggagggggacctcctcgttg	CRISPR spacer
ctcaccaacggggacgtacaggagggggacctcctcgttg	Protospacer
****************************************

16. spacer 1.16|103064|42|NC_017273|PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

agcgccttcggcggcgaggaaatgtgcccggcgtgcaagttg	CRISPR spacer
agcgccttcggcggcgaggaaatgtgcccggcgtgcaagttg	Protospacer
******************************************

17. spacer 1.17|103139|39|NC_017273|PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

cgctctcgacttcgaccgcctcaccggcatcgggggttg	CRISPR spacer
cgctctcgacttcgaccgcctcaccggcatcgggggttg	Protospacer
***************************************

18. spacer 1.18|103211|42|NC_017273|PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

aaggttctggaggcccacagcctggagtgcattccctagttg	CRISPR spacer
aaggttctggaggcccacagcctggagtgcattccctagttg	Protospacer
******************************************

19. spacer 1.19|103286|42|NC_017273|PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

tggccgatgcggtgaacgtttacaggggcgcgcaggccgttg	CRISPR spacer
tggccgatgcggtgaacgtttacaggggcgcgcaggccgttg	Protospacer
******************************************

20. spacer 1.20|103361|41|NC_017273|PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

gtcttcctcgaccccccgtaccggggctacgaggacggttg	CRISPR spacer
gtcttcctcgaccccccgtaccggggctacgaggacggttg	Protospacer
*****************************************

21. spacer 1.21|103435|40|NC_017273|PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

aggttcgggcaagaggtggccgactacgtggaggccgttg	CRISPR spacer
aggttcgggcaagaggtggccgactacgtggaggccgttg	Protospacer
****************************************

22. spacer 1.22|103508|42|NC_017273|PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

gtttgcgggggggtatggggtttggggggtgagccccggttg	CRISPR spacer
gtttgcgggggggtatggggtttggggggtgagccccggttg	Protospacer
******************************************

23. spacer 1.23|103583|40|NC_017273|PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

cccgaggaggccctgcacgacctcatggtctgggccgttg	CRISPR spacer
cccgaggaggccctgcacgacctcatggtctgggccgttg	Protospacer
****************************************

24. spacer 1.24|103656|42|NC_017273|PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

tgccccagtatggcgatggtcatggcccggtccgcccagttg	CRISPR spacer
tgccccagtatggcgatggtcatggcccggtccgcccagttg	Protospacer
******************************************

25. spacer 1.25|103731|39|NC_017273|PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

caggtcatgggaatgtcgtagtggaccagccactcgttg	CRISPR spacer
caggtcatgggaatgtcgtagtggaccagccactcgttg	Protospacer
***************************************

26. spacer 1.26|103803|41|NC_017273|PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

cccacggcggctagggcctccctagcccgccccagttgtta	CRISPR spacer
cccacggcggctagggcctccctagcccgccccagttgtta	Protospacer
*****************************************

27. spacer 2.1|116880|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

cctctctgccgcgagcatccttcacctccaaaggaa	CRISPR spacer
cctctctgccgcgagcatccttcacctccaaaggaa	Protospacer
************************************

28. spacer 2.2|116952|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

acctccaaaaacctgcagaggaaagagcctcaccag	CRISPR spacer
acctccaaaaacctgcagaggaaagagcctcaccag	Protospacer
************************************

29. spacer 2.3|117024|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

ctacacgaagctctggaacagggggggcggtaagct	CRISPR spacer
ctacacgaagctctggaacagggggggcggtaagct	Protospacer
************************************

30. spacer 2.4|117096|35|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

gggtctcgtccttcccgtccttcctaggcatactc	CRISPR spacer
gggtctcgtccttcccgtccttcctaggcatactc	Protospacer
***********************************

31. spacer 2.5|117167|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

ggacctcgccatttccaccagggaggacgcggacta	CRISPR spacer
ggacctcgccatttccaccagggaggacgcggacta	Protospacer
************************************

32. spacer 2.6|117239|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

tatcaccgacgccgccatcgtacaaaccgggagtag	CRISPR spacer
tatcaccgacgccgccatcgtacaaaccgggagtag	Protospacer
************************************

33. spacer 3.1|128205|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

attagtcacggcccaaatggccgacggcgactacga	CRISPR spacer
attagtcacggcccaaatggccgacggcgactacga	Protospacer
************************************

34. spacer 3.2|128277|38|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

ccgtttagaaagccagcttctgagcgcccctgagggag	CRISPR spacer
ccgtttagaaagccagcttctgagcgcccctgagggag	Protospacer
**************************************

35. spacer 3.3|128351|37|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

tcccgtggcctccagggcctcggctcctccctcgggg	CRISPR spacer
tcccgtggcctccagggcctcggctcctccctcgggg	Protospacer
*************************************

36. spacer 3.4|128424|37|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

aactccccggcgagatgggccacagagcgaacccctt	CRISPR spacer
aactccccggcgagatgggccacagagcgaacccctt	Protospacer
*************************************

37. spacer 3.5|128497|37|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

cactacctagtgcaccagatgcactagtctcggggct	CRISPR spacer
cactacctagtgcaccagatgcactagtctcggggct	Protospacer
*************************************

38. spacer 3.6|128570|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtgcggcgtgccgggtggtctacggccccccgc	CRISPR spacer
gccgtgcggcgtgccgggtggtctacggccccccgc	Protospacer
************************************

39. spacer 3.7|128642|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

actaccaaggggcgagaggagagatttggttcggga	CRISPR spacer
actaccaaggggcgagaggagagatttggttcggga	Protospacer
************************************

40. spacer 3.8|128714|35|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

cccgtagccgccatttgctttccaagccaccacct	CRISPR spacer
cccgtagccgccatttgctttccaagccaccacct	Protospacer
***********************************

41. spacer 3.9|128785|38|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

ttctcgcacccctcctcctcggcgcgtgggtccaccac	CRISPR spacer
ttctcgcacccctcctcctcggcgcgtgggtccaccac	Protospacer
**************************************

42. spacer 3.10|128859|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

cagatctacctcggcccgggcgccctcgtggacccc	CRISPR spacer
cagatctacctcggcccgggcgccctcgtggacccc	Protospacer
************************************

43. spacer 4.1|136081|51|NC_017273|CRISPRCasFinder matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

gatgactccaagcccattgctaaggttggttgacgactatgagttcggtcg	CRISPR spacer
gatgactccaagcccattgctaaggttggttgacgactatgagttcggtcg	Protospacer
***************************************************

44. spacer 5.1|172090|33|NC_017273|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

ataagcgccgccgcgtagaagcccagcttggtc	CRISPR spacer
ataagcgccgccgcgtagaagcccagcttggtc	Protospacer
*********************************

45. spacer 5.2|172160|38|NC_017273|CRISPRCasFinder,CRT,PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

agggcccgggcgggggtggggggacgccccccgtggag	CRISPR spacer
agggcccgggcgggggtggggggacgccccccgtggag	Protospacer
**************************************

46. spacer 5.3|172235|35|NC_017273|CRISPRCasFinder,CRT,PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

gcgttggggatgccgctttcccttgcccaagccgt	CRISPR spacer
gcgttggggatgccgctttcccttgcccaagccgt	Protospacer
***********************************

47. spacer 5.4|172307|37|NC_017273|CRISPRCasFinder,CRT,PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

aagtgtgggggctggcggggtgggggttgggggcggt	CRISPR spacer
aagtgtgggggctggcggggtgggggttgggggcggt	Protospacer
*************************************

48. spacer 5.5|172381|39|NC_017273|CRISPRCasFinder,CRT,PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

atgatctcaggcagctacagcgtcatcgctaatgtcaac	CRISPR spacer
atgatctcaggcagctacagcgtcatcgctaatgtcaac	Protospacer
***************************************

49. spacer 5.6|172457|35|NC_017273|CRISPRCasFinder,CRT,PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcacggcgcggtagagcgcaggattttcaccag	CRISPR spacer
tcgcacggcgcggtagagcgcaggattttcaccag	Protospacer
***********************************

50. spacer 6.1|180626|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

aggacggccattggagacgccgtcctaccctatctg	CRISPR spacer
aggacggccattggagacgccgtcctaccctatctg	Protospacer
************************************

51. spacer 6.2|180699|39|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

ccccgccacgtggcgcgcaggatggcccacgcctcccga	CRISPR spacer
ccccgccacgtggcgcgcaggatggcccacgcctcccga	Protospacer
***************************************

52. spacer 6.3|180775|35|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

cttggcgcgtgggaggaggtccggagggggctcaa	CRISPR spacer
cttggcgcgtgggaggaggtccggagggggctcaa	Protospacer
***********************************

53. spacer 6.4|180847|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

tcggggatggtcttaccctccagagcggcgtgccaa	CRISPR spacer
tcggggatggtcttaccctccagagcggcgtgccaa	Protospacer
************************************

54. spacer 6.5|180920|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

ctcccccccctatagtccccccccaaaactcggacc	CRISPR spacer
ctcccccccctatagtccccccccaaaactcggacc	Protospacer
************************************

55. spacer 6.6|180993|40|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

gattactcaccctgggtgagtaaactgattgggggtaggt	CRISPR spacer
gattactcaccctgggtgagtaaactgattgggggtaggt	Protospacer
****************************************

56. spacer 6.7|181070|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

attcacatcgtgggggcggccacccccaccgtggcc	CRISPR spacer
attcacatcgtgggggcggccacccccaccgtggcc	Protospacer
************************************

57. spacer 6.8|181143|35|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

cggttgatctcctccggggtcatggaagctaaatc	CRISPR spacer
cggttgatctcctccggggtcatggaagctaaatc	Protospacer
***********************************

58. spacer 6.9|181215|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

tccgacctacccgacttctcccaggaggccaaccgc	CRISPR spacer
tccgacctacccgacttctcccaggaggccaaccgc	Protospacer
************************************

59. spacer 6.10|181288|39|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

cagagcagtgtgccagtctctggggtgtttgacggggta	CRISPR spacer
cagagcagtgtgccagtctctggggtgtttgacggggta	Protospacer
***************************************

60. spacer 6.11|181364|37|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

gtctacgggaaggccttcgccctccggagggcggaga	CRISPR spacer
gtctacgggaaggccttcgccctccggagggcggaga	Protospacer
*************************************

61. spacer 6.12|181438|38|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

tagaagactctaacgtcagggaccagctctcccaaacc	CRISPR spacer
tagaagactctaacgtcagggaccagctctcccaaacc	Protospacer
**************************************

62. spacer 6.13|181513|35|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

ccctcaaccttcgccacgccctcctggggcgccgg	CRISPR spacer
ccctcaaccttcgccacgccctcctggggcgccgg	Protospacer
***********************************

63. spacer 6.14|181585|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

accaggaggcgttatgaccccacaggaggccatcca	CRISPR spacer
accaggaggcgttatgaccccacaggaggccatcca	Protospacer
************************************

64. spacer 6.15|181658|38|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

cagcatggcctgctctaggcgcgcttcgtactcttcgg	CRISPR spacer
cagcatggcctgctctaggcgcgcttcgtactcttcgg	Protospacer
**************************************

65. spacer 6.16|181733|37|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

cttggcgggaatgccgagcctggcggccatgagccgc	CRISPR spacer
cttggcgggaatgccgagcctggcggccatgagccgc	Protospacer
*************************************

66. spacer 6.17|181807|38|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

acgtttcagctcctccaggaggtacttcgccgtggcca	CRISPR spacer
acgtttcagctcctccaggaggtacttcgccgtggcca	Protospacer
**************************************

67. spacer 6.18|181882|35|NC_017273|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

gtaggggtgggccgccagcaccaggcccggggtcg	CRISPR spacer
gtaggggtgggccgccagcaccaggcccggggtcg	Protospacer
***********************************

68. spacer 7.1|265781|20|NC_017273|CRT matches to NC_006462 (Thermus thermophilus HB8 plasmid pTT27, complete sequence) position: , mismatch: 0, identity: 1.0

gcgtcggggggtgcggggta	CRISPR spacer
gcgtcggggggtgcggggta	Protospacer
********************

69. spacer 7.1|265781|20|NC_017273|CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

gcgtcggggggtgcggggta	CRISPR spacer
gcgtcggggggtgcggggta	Protospacer
********************

70. spacer 7.2|265838|19|NC_017273|CRT matches to NZ_CP014142 (Thermus parvatiensis strain RL plasmid pTP143, complete sequence) position: , mismatch: 0, identity: 1.0

gtgttggccccctccccta	CRISPR spacer
gtgttggccccctccccta	Protospacer
*******************

71. spacer 7.2|265838|19|NC_017273|CRT matches to NC_005838 (Thermus thermophilus HB27 plasmid pTT27, complete sequence) position: , mismatch: 0, identity: 1.0

gtgttggccccctccccta	CRISPR spacer
gtgttggccccctccccta	Protospacer
*******************

72. spacer 7.2|265838|19|NC_017273|CRT matches to NC_005838 (Thermus thermophilus HB27 plasmid pTT27, complete sequence) position: , mismatch: 0, identity: 1.0

gtgttggccccctccccta	CRISPR spacer
gtgttggccccctccccta	Protospacer
*******************

73. spacer 7.2|265838|19|NC_017273|CRT matches to NZ_AP019802 (Thermus thermophilus strain HC11 plasmid pHC11, complete sequence) position: , mismatch: 0, identity: 1.0

gtgttggccccctccccta	CRISPR spacer
gtgttggccccctccccta	Protospacer
*******************

74. spacer 7.2|265838|19|NC_017273|CRT matches to NZ_AP019802 (Thermus thermophilus strain HC11 plasmid pHC11, complete sequence) position: , mismatch: 0, identity: 1.0

gtgttggccccctccccta	CRISPR spacer
gtgttggccccctccccta	Protospacer
*******************

75. spacer 7.2|265838|19|NC_017273|CRT matches to NC_017588 (Thermus thermophilus JL-18 plasmid pTTJL1801, complete sequence) position: , mismatch: 0, identity: 1.0

gtgttggccccctccccta	CRISPR spacer
gtgttggccccctccccta	Protospacer
*******************

76. spacer 7.2|265838|19|NC_017273|CRT matches to NC_017588 (Thermus thermophilus JL-18 plasmid pTTJL1801, complete sequence) position: , mismatch: 0, identity: 1.0

gtgttggccccctccccta	CRISPR spacer
gtgttggccccctccccta	Protospacer
*******************

77. spacer 7.2|265838|19|NC_017273|CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

gtgttggccccctccccta	CRISPR spacer
gtgttggccccctccccta	Protospacer
*******************

78. spacer 7.2|265838|19|NC_017273|CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 0, identity: 1.0

gtgttggccccctccccta	CRISPR spacer
gtgttggccccctccccta	Protospacer
*******************

79. spacer 7.2|265838|19|NC_017273|CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gtgttggccccctccccta	CRISPR spacer
gtgttggccccctccccta	Protospacer
*******************

80. spacer 7.2|265838|19|NC_017273|CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gtgttggccccctccccta	CRISPR spacer
gtgttggccccctccccta	Protospacer
*******************

81. spacer 7.2|265838|19|NC_017273|CRT matches to NZ_LR027520 (Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgttggccccctccccta	CRISPR spacer
gtgttggccccctccccta	Protospacer
*******************

82. spacer 7.2|265838|19|NC_017273|CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gtgttggccccctccccta	CRISPR spacer
gtgttggccccctccccta	Protospacer
*******************

83. spacer 7.2|265838|19|NC_017273|CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gtgttggccccctccccta	CRISPR spacer
gtgttggccccctccccta	Protospacer
*******************

84. spacer 2.1|116880|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NC_017590 (Thermus thermophilus JL-18 plasmid pTTJL1802, complete sequence) position: , mismatch: 3, identity: 0.917

cctctctgccgcgagcatccttcacctccaaaggaa	CRISPR spacer
cctctctgccgtgagcatcctccacctccaaaggga	Protospacer
***********.*********.************.*

85. spacer 1.4|103139|35|NC_017273|CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.8

cgctctcgacttcgaccgcctcac--cggcatcgggg	CRISPR spacer
cgatctcgacttcgaccgcatcaccacgcaatccg--	Protospacer
** **************** ****  **  *** *  

86. spacer 1.4|103139|35|NC_017273|CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.8

cgctctcgacttcgaccgcctcac--cggcatcgggg	CRISPR spacer
cgatctcgacttcgaccgcatcaccacgcaatccg--	Protospacer
** **************** ****  **  *** *  

87. spacer 1.4|103139|35|NC_017273|CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.8

cgctctcgacttcgaccgcctcac--cggcatcgggg	CRISPR spacer
cgatctcgacttcgaccgcatcaccacgcaatccg--	Protospacer
** **************** ****  **  *** *  

88. spacer 1.4|103139|35|NC_017273|CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.8

cgctctcgacttcgaccgcctcac--cggcatcgggg	CRISPR spacer
cgatctcgacttcgaccgcatcaccacgcaatccg--	Protospacer
** **************** ****  **  *** *  

89. spacer 6.5|180920|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to MN694629 (Marine virus AFVG_250M263, complete genome) position: , mismatch: 7, identity: 0.806

ctcccccccctatagtccccccccaaaactcggacc---	CRISPR spacer
agaccccccctatagtccccccccaagact---accaag	Protospacer
   ***********************.***   ***   

90. spacer 1.4|103139|35|NC_017273|CRISPRCasFinder,CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 8, identity: 0.771

-cgctctcgacttcgaccgcctcaccggcatcgggg	CRISPR spacer
gcgc-ctcgacttcgagcgcttcaccggcaacaccc	Protospacer
 *** *********** ***.********* *.   

91. spacer 1.4|103139|35|NC_017273|CRISPRCasFinder,CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 8, identity: 0.771

-cgctctcgacttcgaccgcctcaccggcatcgggg	CRISPR spacer
gcgc-ctcgacttcgagcgcttcaccggcaacaccc	Protospacer
 *** *********** ***.********* *.   

92. spacer 5.1|172090|33|NC_017273|CRISPRCasFinder,CRT matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 9, identity: 0.727

ataagcgccgccgcgtagaagcccagcttggtc	CRISPR spacer
agcagcgccgcctcgtaggagcccagccgcgag	Protospacer
*  ********* *****.********.  *  

93. spacer 6.5|180920|36|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to MN693764 (Marine virus AFVG_250M260, complete genome) position: , mismatch: 9, identity: 0.75

ctcccccccctatagtccccccccaaaactcggacc	CRISPR spacer
agaccccccctatagtccccccccaagactactaag	Protospacer
   ***********************.***   *  

94. spacer 6.13|181513|35|NC_017273|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.686

ccctcaaccttcgccacgccctcctggggcgccgg	CRISPR spacer
tgcggcgatttcgccacgccctcctggagctccga	Protospacer
. *   . .******************.** ***.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 13556 : 23423 9 Staphylococcus_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_2 89674 : 150987 46 Cafeteria_roenbergensis_virus(25.0%) integrase,transposase attL 130250:130283|attR 161598:161631
DBSCAN-SWA_3 350853 : 396075 42 Planktothrix_phage(40.0%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage