CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_015946	Mycoplasma putrefaciens KS1, complete sequence	2 crisprs	NA	0	1	0	0

1. NC_015946

CRISPR-Cas detection and classification

Crispr_ID: NC_015946_1

• CRISPR_ID: NC_015946_1
• CRISPR_location: 449390-449562
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_015946_1

Consensus_repeat	Method
AGTGCTTTTAATCAAGATATTTC	CRISPRCasFinder

spacers of NC_015946_1

>1.1|449413|52|NC_015946|CRISPRCasFinder
AAGCTGAAACACTTCAAGAGTACAAAATATGGGTGAATTATTTAAAAATGCC
>1.2|449488|52|NC_015946|CRISPRCasFinder
TGCTTGAGATACTTCAAGAGTAACTGATATGAATAGTATGTTTAACGGAGCT

CRISPR arrays and Neighbor proteins around NC_015946_1

CRISPR arrays

The CRISPR arrays of NC_015946_1

>merge|NC_015946|1|449390-449562|CRISPRCasFinder
AGTGCTTTTAATCAAGATATTTCAAGCTGAAACACTTCAAGAGTACAAAATATGGGTGAATTATTTAAAAATGCCAGTGCCTTTAATCAAGATATTTCTGCTTGAGATACTTCAAGAGTAACTGATATGAATAGTATGTTTAACGGAGCTAGTGCTTTTAATCAAAACCTTTC

>NC_015946|1|1|449390-449562|CRISPRCasFinder
AGTGCTTTTAATCAAGATATTTC	AAGCTGAAACACTTCAAGAGTACAAAATATGGGTGAATTATTTAAAAATGCC
AGTGCCTTTAATCAAGATATTTC	TGCTTGAGATACTTCAAGAGTAACTGATATGAATAGTATGTTTAACGGAGCT
AGTGCTTTTAATCAAAACCTTTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_015946.1|WP_014035125.1|454522_455086_-|inorganic-diphosphatase	unknown	unknown	gnl|CDD|376376
NC_015946.1|WP_014035111.1|438333_439161_-|hypothetical-protein	unknown	unknown	unknown
NC_015946.1|WP_014035115.1|441765_442422_-|ribulose-phosphate-3-epimerase	unknown	unknown	gnl|CDD|238244
NC_015946.1|WP_014035121.1|450548_451394_-|segregation/condensation-protein-A	unknown	unknown	gnl|CDD|234635
NC_015946.1|WP_014035113.1|439970_440630_-|deoxynucleoside-kinase	unknown	unknown	gnl|CDD|238836
NC_015946.1|WP_014035112.1|439279_439993_-|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl|CDD|237084
NC_015946.1|WP_014035124.1|452855_454352_-|hypothetical-protein	unknown	unknown	unknown
NC_015946.1|WP_014035127.1|456328_457672_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|284141
NC_015946.1|WP_014035123.1|452262_452853_-|hypothetical-protein	unknown	unknown	unknown
NC_015946.1|WP_014035129.1|458377_460129_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|226165
NC_015946.1|WP_043714027.1|455249_456101_+|ECF-transporter-S-component	unknown	unknown	unknown
NC_015946.1|WP_014035122.1|451411_452251_-|hypothetical-protein	unknown	unknown	unknown
NC_015946.1|WP_014035110.1|436365_438195_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|224196
NC_015946.1|WP_014035118.1|446916_448176_-|DUF2130-domain-containing-protein	unknown	unknown	gnl|CDD|370744
NC_015946.1|WP_014035116.1|442421_444248_-|PTS-ascorbate-specific-subunit-IIBC	unknown	unknown	gnl|CDD|236559
NC_015946.1|WP_014035109.1|435659_436364_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NC_015946.1|WP_014035128.1|457655_458414_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|226164
NC_015946.1|WP_014035114.1|440674_441430_-|rRNA-pseudouridine-synthase	unknown	unknown	gnl|CDD|224108
NC_015946.1|WP_014035117.1|444258_444702_-|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl|CDD|334031
NC_015946.1|WP_014035120.1|449953_450562_-|SMC-Scp-complex-subunit-ScpB	unknown	unknown	gnl|CDD|377219

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_015946.1|WP_014035115.1|441765_442422_-|ribulose-phosphate-3-epimerase	gnl|CDD|238244	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.	1.64643e-73
NC_015946.1|WP_014035121.1|450548_451394_-|segregation/condensation-protein-A	gnl|CDD|234635	PRK00104, scpA, segregation and condensation protein A; Reviewed.	3.43957e-33
NC_015946.1|WP_014035113.1|439970_440630_-|deoxynucleoside-kinase	gnl|CDD|238836	cd01673, dNK, Deoxyribonucleoside kinase (dNK) catalyzes the phosphorylation of deoxyribonucleosides to yield corresponding monophosphates (dNMPs). This family consists of various deoxynucleoside kinases including deoxyribo- cytidine (EC 2.7.1.74), guanosine (EC 2.7.1.113), adenosine (EC 2.7.1.76), and thymidine (EC 2.7.1.21) kinases. They are key enzymes in the salvage of deoxyribonucleosides originating from extra- or intracellular breakdown of DNA.	3.42289e-58
NC_015946.1|WP_014035112.1|439279_439993_-|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl|CDD|237084	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator.	3.84036e-102
NC_015946.1|WP_014035127.1|456328_457672_+|ABC-transporter-substrate-binding-protein	gnl|CDD|284141	pfam06646, Mycoplasma_p37, High affinity transport system protein p37. This family consists of several high affinity transport system protein p37 sequences which are specific to Mycoplasma species. The p37 gene is part of an operon encoding two additional proteins which are highly similar to components of the periplasmic binding-protein-dependent transport systems of Gram-negative bacteria.It has been suggested that p37 is part of a homologous, high-affinity transport system in M. hyorhinis, a Gram-positive bacterium.	6.33137e-31
NC_015946.1|WP_014035125.1|454522_455086_-|inorganic-diphosphatase	gnl|CDD|376376	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase.	2.4059e-74
NC_015946.1|WP_014035129.1|458377_460129_+|ABC-transporter-permease-subunit	gnl|CDD|226165	COG3639, COG3639, ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism].	1.12765e-19
NC_015946.1|WP_014035110.1|436365_438195_-|ABC-transporter-permease	gnl|CDD|224196	COG1277, NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only].	8.63064e-08
NC_015946.1|WP_014035118.1|446916_448176_-|DUF2130-domain-containing-protein	gnl|CDD|370744	pfam09903, DUF2130, Uncharacterized protein conserved in bacteria (DUF2130). This domain, found in various hypothetical prokaryotic proteins, has no known function.	5.11451e-39
NC_015946.1|WP_014035116.1|442421_444248_-|PTS-ascorbate-specific-subunit-IIBC	gnl|CDD|236559	PRK09548, PRK09548, PTS ascorbate-specific subunit IIBC.	0
NC_015946.1|WP_014035109.1|435659_436364_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.54625e-70
NC_015946.1|WP_014035128.1|457655_458414_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|226164	COG3638, COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].	2.83904e-80
NC_015946.1|WP_014035114.1|440674_441430_-|rRNA-pseudouridine-synthase	gnl|CDD|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	3.13788e-78
NC_015946.1|WP_014035117.1|444258_444702_-|PTS-sugar-transporter-subunit-IIA	gnl|CDD|334031	pfam00359, PTS_EIIA_2, Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.	5.74667e-26
NC_015946.1|WP_014035120.1|449953_450562_-|SMC-Scp-complex-subunit-ScpB	gnl|CDD|377219	pfam04079, SMC_ScpB, Segregation and condensation complex subunit ScpB. This is a family of prokaryotic proteins that form one of the subunits, ScpB, of the segregation and condensation complex, condensin, that plays a key role in the maintenance of the chromosome. In prokaryotes the complex consists of three proteins, SMC, ScpA (kleisin) and ScpB. ScpB dimerizes and binds to ScpA. As originally predicted, ScpB is structurally a winged-helix at both its N- and C-terminal halves. IN Bacillus subtilis,one Smc dimer is bridged by a single ScpAB to generate asymmetric tripartite rings analogous to eukaryotic SMC complex ring-shaped assemblies.	5.57e-43

Protein sequences

>NC_015946.1|WP_014035118.1|446916_448176_-|DUF2130-domain-containing-protein
MSDIKFKILNKHSIELLEDAKKSSVIDLSKAQEIDLSVVLEQINLKKDQVYLNKLEEAKKKWNLTAELEKTKYQQQLAEQYQKETEQKIQQISELQAANQTLVNQIEQNKQQLSEKLANQIKIIKLEQQARIVELENKLANLELIQENQILQLTSKKDEQINNLKKDLELITREKLTKNIKLIGEELENYCLNEFNKISTFAFQTSDLSKDNQAIKIDGESKATKGDFIFKVYAEPEKQNLLLSVMCEMKSEQLNSQNKKKNSDHYKKLDDDRNKKNLDYALLVSELEYETSDSLIYRVSDYKNMFVVRPMYFITMLGVLETIALKYKDLKLNRLQQELSFKEKQDILNEFEEFKNNLLDNALKNITNKVNEISKSAENIKKEATKILEATELVINKHLNTVKNKIIGFKIEKKIVDKI
>NC_015946.1|WP_014035117.1|444258_444702_-|PTS-sugar-transporter-subunit-IIA
MLFKKELIDYIDKKVDSWEQGVEIASQLLIQNGYVDNSYPKEIIKITKQNGPYYIVAPKIALLHLTPKPEWKENVISLTVFKEPIIFKNESRYHVNFCLALLAKDNSSHIDILQKFALLFNNQEFIEQLEKIKNKKDLELVLEKYDK
>NC_015946.1|WP_014035116.1|442421_444248_-|PTS-ascorbate-specific-subunit-IIBC
MNFGNYVVNFFTQFISTPAILIALFAFVGCLLQRKKFSETIVSTIKTAVGFLIIGGGAGVIAGAIDKLGRAFTLLFSRTGAIAYNDVIPGLLLNTSNVFLTGSLIMITAMVLNIVLARITKFKYIYLTGHVLFYFSVMFAATMHIAGLNLSNTANIVSVVISGGLVVSIYMVLSPVLLNKHVIRITNNEKIALGHTGALGYWLSGAIGSGLAKISKKPYRSTEEINFPKGLNFLRNTNVAIGITMLVIYLIIYFTTLGVKGYQAMITAGVIKKDDDVFVQGLLQAFTFAAGVEIILIGVRMFIAEIIPSFQGISKKLVPDAKPALDCPTVYPYAPNAVIIGFISSFVAGIIVMGITILITSINGVDSKRWVIILPSIVPHFFVGATCGVFGNSKGGIKGAVIGSFINGLIISFVPFLFLGLQMIPTISENGQQVAWGDGDFLLGLPFGIITKLSGAKIAVWLIPVISVVLWALLPVLSLFKKKQKANDSQKSDLVQKEQSEVTLDSHNQVLTTKYDLKKQNKLVAVCGQGLGSSLLIEMNLKNVVKQLGLDIQVTHTNLNSFDATDDSILAVVCGSDLENSIDFDRKIVLENLLDQKQAEEKIREFLR
>NC_015946.1|WP_014035115.1|441765_442422_-|ribulose-phosphate-3-epimerase
MKLTPSIYCADLVNLKEEINHLIKAGIDQIHFDVMDGVFVKNYGLSAKLLQDIKKTFVNLKIEVHIMAIDLLDKIKLFKDADYFTFHFNTIKDINQAKQWIKEIKNLGLKPGIALDLNNDFSEIIPLLNDLNQVTFMSIKPGFTGQKFEDQTWNKLAKIKELKAQFSHLKFQIDGGVRWENIKQLIDYGFDWIVVGSMLFSSEDYQKTVQEIKKLELN
>NC_015946.1|WP_014035114.1|440674_441430_-|rRNA-pseudouridine-synthase
MTKERLQKVIANRGYASRRAAEKLITSGRVKVDGIIITELGTKVDRNAKIEINNQEVISDSANQKYYYLFYKPRLVLTTMYDPKKRKTVADYFQDLPHRVYPIGRLDYDVSGLLIMTNDGEMSHFIMHPRYEFFKTYQAMCAGIVSKKQIAELVNGVIIDDNYLTKAIDAKLLKYDQEKNFSIIELTITEGRKHHVKKMLQAANLNLIKLKRTRIEFLEIGDLKPGQYRELKPNEVKKLYGIYKSIRQKDS
>NC_015946.1|WP_014035113.1|439970_440630_-|deoxynucleoside-kinase
MRIAIFGTVGAGKSTVSKEISKRLGYEIFPEPIEENPYFDDYYKDLKATVFKMQIYMLTARSKQLKQAQQLKDIIFDRTILEDPIFMKVNYDLGNVNPTDYKTYIDFYDNVVLENLKLPDERVKFDIVIYLKVSTKTSIKRIAQRGRPQELLIDNSYWEILNKNYDEFYEKNIYDFPFFVVNADEENIDKIMNVIMPKLEQLEKELKNKEQNNGKSTRS
>NC_015946.1|WP_014035112.1|439279_439993_-|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MGRAHEVRAASMAKTAAKKSAANGRAAKEIYMAAKQGGIDPNSNLALRSVIDKAKANQIPRDVIERAIKRAAGGDSESYTANRYEGIGPGNTAIIVDVLTSNVNRAAALIREVFNKNNGNPDGKVSFLFDDVSIFAFKAKTVEEVLEALMLADLEVNDVVEQDDHIIVYAPFKSFASVKKALDDLKIDQYSISETTMIPIDQKIVIKDQDTKKQLQILLDKLDDLEDVQNVYHNAEL
>NC_015946.1|WP_014035111.1|438333_439161_-|hypothetical-protein
MTHNWLNLLLLVINVFLLGSILILYLFCTKSYLNHTVPYINSSNNNITSTEINNLIKNFQIMFNLKEYQVIYTDTEKMIKIFKNVHKNKKQIFISKRIFESTGYELDYLISRLWISAKQIQKDNKLTTYKTLIYTIPYTLFFLITVSFIFSVFLYIYHRSNTNFMIDNTSNDRISQFEFVLLWLWINPISSYLCFAFLMCLFVTYYLSIRYKQKLEIYYNDEVTKLVKTTISEYEFDFKAARTYAQSIKLSYIPVMKVFNFWTNHYKWTGPFTIV
>NC_015946.1|WP_014035110.1|436365_438195_-|ABC-transporter-permease
MLKSAFDYAFFAFNIILKKKSSLLIPITIVISSFIVGLIFKFIITDKYHDLASFLYTFLIIVVSVIYGSIKALNLFKDLQAEGLEIITLSKPISRKSLILGKLICLAFFGLIWSASLLVSGFLYLYATNNFVEILLKSLLLFIVSLIVYFLISLFVSLLSYKLSQKIAITIPLIVFIPLSLTGMVLASNVRSNLDQASFFINQKYQYHHAGNQLNAEAYFLNNNKDELLLMPNGFENKEFNEQQLKYLNDLVKHTNQNLSSWQVYSWISIPYQLINIFNFKNKNLFNSVNNHTSNLSNYLYYKNLDDISYNYKLIDNLKQTKYLTKSFDANFQTKIFASYIVPGLLKAHSIFSDQTQITNYDVIYARVGVDKVESDFIDDQANFSNNDSSFVGRIKWDKVFQALQDQKFNQIAKKFVNQLTYQLSNNKKSLKQLNSWLLQKISEYLANPNSEINTYQNFNLDLFDPNSIKQAKLGSIYELDIYKAVLLMNYIYFNNQDSLIYQAMIKNPNDENTYANYQISLKIKNQDFLIGGFKAFNKTVLEKEKKPVIRYHLEKSDDNYLFSSAPNLYAITRNQQIVNKYIIFALWIILIATEFVLVFKLYQKKEYI
>NC_015946.1|WP_014035109.1|435659_436364_-|ABC-transporter-ATP-binding-protein
MQKVLEIYNLSKIFDQSNRGVKNISMVVNKGDFHAFIGENGAGKTTTIKTIIGASVQYKGKVLINQIDINNPLARTYLGYVPESALFPRELTSYQYLINLAKLSKIDSETADLKIKAFLKMFNIEQLINEKPANFSSGQKKKILLIQALLHDPKILILDEPAANLDPTARHELFTFLQKLNQEKQIAILISSHILSEIDKYANSVTLIHNGSVLYTGAKQKSLEELFYEKVITS
>NC_015946.1|WP_014035120.1|449953_450562_-|SMC-Scp-complex-subunit-ScpB
MNNIKAIIEGLLFIYGDEGISLVEIQNVLESIKPNEIKQAIIDLNKKYLADEDSALSIQVFAKNKYRMQTKPELHSYFAKLEKFQENRKLSRSTIEVLSIVAYKGPISKSEIDNLRNSDSAYQMYKLREKKLIKAIKKDPVTRANLYTITDNFFKIFNLEKGLEELPSISDQEIQEIIDQQTKQDNENQDLFGQVEDFDLDH
>NC_015946.1|WP_014035121.1|450548_451394_-|segregation/condensation-protein-A
MKHWTEVTIDQFSGPIELLWTMIKEKKISIVKLSLIEILDQYLEYIRQNQELDIEIASEYLTIAAQLIELKSRYLLPVVEVESATDELEFDELVNRIEQYDQIKNMANFFVESQNLYFTTLSKKKSKQNFSKELAFNSEEVLLDPLDIDLDKFTEIFRSVISKSKINDYYDDFDFENEIYQTLTTQAISPQQIANEIIAKMKTSRVKVWTLYELLEGMNLNNKNLISCFLAVLDLVRYQIMTISEHENDILIGFRKEVVQDESIIIKQLQAWESEVQYEQH
>NC_015946.1|WP_014035122.1|451411_452251_-|hypothetical-protein
MTVKDLNLINLKLKQLIQASKQKDISNQQLVDIANYATNVVDNFLIQNQEIAYYLNNELQLQKNKLDLEINQQIQLLEKKLVDQFLHLLKTLIAILLARKTFCNLEIFEIIKANLIFYVRQSLEDSLYDSTETFFNIWDQEFHLQQAIFNYLYDNFNKMTYHMLNLDLKYNLKPLTKFENNYVFKKDFVNLAFVFYKTRGTMNRSDEFFKQLNKSLIFNLIEKLKYYLDHFYLNKENNLNISNTTKSLFIIICRIILQIEFDFKSNQEITKLIDLNSNN
>NC_015946.1|WP_014035123.1|452262_452853_-|hypothetical-protein
MKLLKCQQLLNSNKTNTKDIDIKVAKDFLNYWINQYQLDFDDKIKQFLIDIIQNTALLNSRTVVLQSDLFSLLYVDEICNSNLKDSFYDALDFTMFRELNDFLNQTYHFKELLFELFEKKQITDLQIKDSKILIDEIQQKVLELKNSTDVILNNLDFQNQLNKELVDQFYNHQLDLKIKKLLWYANVLKVVVAFKK
>NC_015946.1|WP_014035124.1|452855_454352_-|hypothetical-protein
MSSLRWDLYIVNPIIIILGLALTHFLFYKNKTSSKKKLFFLELALFWIASIFLIKINNDALVSLDDKNLSLPVMILLSLIGSYVIFLAALSPLSVKLTFFLHRRRLWIWIANGSAILATILGFVIHPSAVSVIFMSILIGIAISAKTIYFLFYNEQFHERLFPILTSMKCGVWIVFSTFIAVEIYSLTLVNNHHFQSFGDAKIILIIALLALLTSLSISILLKENKQKIRRYDDILLDSLQKPDKKTLIWLMLIGFLIGLINALIRSPIFEMYIAAMIKSQDNINQNVLLVLRNHNLLFIGGQMIFGYLFYRFVLDSIGVVKAISLLTAIAMAGLIVMTFVHNVYLILVVSFIFGLLLFVTFYTWFGIALMWNYRVKKTPIIGIYISFACLGFLLPNTVTNILKSKSVALFAIFKNTDAIISATDAQQIKDFVVLNSNAYYVVCSTLFVVIASYLVAVVWLAPRIIAEYHDLTTFKIKIATILRKNLEDKINTRLVIE
>NC_015946.1|WP_014035125.1|454522_455086_-|inorganic-diphosphatase
MSKNNVIDMIVEIPKGSSNKYEVDEKTKRIKLDRVLYGANFYPGEYGMIENTLDWDGDPLDVISLCTYPTLPGVEVSVRILGSIKMIDAGEIDTKLFGVFNDDPRFKDYQTLNDVPKHYRDEIENFFLQYKALQNKVVKINGWGSLEEALEEVKECQQRYQEYKDRLAKGEKDQILAEWKAQGLGQA
>NC_015946.1|WP_043714027.1|455249_456101_+|ECF-transporter-S-component
MQKINTPKDLVSENDCLIVDSTEQKDHNHLSADHYHGVHHIDKYGNHDDVETADFELRSVFQFSKRKLIFKIVLTGIFLALTSAVGALDILLESIHIPVGGDQVWIETRFLDITVVCISIATLGPIFASLVGFLSPIIHNLIHGMEHGWIQPPIQAVEYVIIVWLVFLIFNVLFKNSPIHKDQDPKVANFKRWAPLPIMVVLSALIATLGLALALYIQSLLPHGSHSHNHDHNHGTGEQLEWNNVNIFIMLAVFGWNCLRFFIALSLFTVIEWKMRPINHRYR
>NC_015946.1|WP_014035127.1|456328_457672_+|ABC-transporter-substrate-binding-protein
MNKNNLKIMITMSVAVGVGSTLTLVSACNTRFAPSWDDTITITNGWINPGFSGTEKEEDFIKLLENKFNGLKNQNKATRKYKDVKFQIKGDGDKKAFLENLKANDKKNNVYIANYTYYKNFWDSANQKINHREVDQVKLVAQTSTLKFKWQSNFNDNDFYKKDNGQTLMQQAEANNKIWVDDVGAEYPDWYKQEKEQKLNFDGSKYTNFYDQNNKLTYVYRGAILISGNKTNREKIKSQWEKKEYENFIKNGIVYEKSTSAGQYSYQVALMARHFGKSVETVKHDLEVNESYKKYIFKGKGNGPDAQLGKKAKLDSQDFYPSIGFVDDGVYNWTHSTEKSTLFKPTEFKSEKGIKDDNNVVIRTLILTNPAPYDLVLARKGMLDEQVKLLTETLTSLSVEQNTYGIYTGYNKFNTLDKTLLEKMVKLQVQAETTQDLATDIPDANKK
>NC_015946.1|WP_014035128.1|457655_458414_+|ATP-binding-cassette-domain-containing-protein
MQTKNNKVIILRNVAIAYGKKSEIILKNINLEVAKNEFVAIIGPSGVGKSTLFKVFVNAINPITGQVEVLNNDFNNLSTKQKIKMLSKIGFLTQKTNLINTDNVYNNIVRSITNYKNVFYKFFGILTKQQKLNIFEKLDDLKILDKAFYKVSELSGGQQQRVEIAKLLIKDVELILADEPTASLDHQTSLEVIEILKEISKQKTVIVNIHDLDLAKKYFDRVIAINNKTIAFNKKTSDIKQWELEKIIQTKN
>NC_015946.1|WP_014035129.1|458377_460129_+|ABC-transporter-permease-subunit
MRIRKNNPNQKLVKEANFFKYRYVNLKTNTKTSWRVNAIYYHLLILVAICLIVWILYLNSSSIKFENFENVIEKLKLLFRFDNKSNLTTGEFSTNYTNLFLDSLKLLWLTIKFALTGTFFGFILALITAYLSFDKTTNKYLAFIISVFILFLRAIPELVFITLITGTFRNELSLLLVYLWFTWLWLHKYYLEMLNSFDLEWYYNSINQGNSKFKAFIKEIFPRIKNRVVALFIFSFESNIRWSSILGALSLPGIGLLINYASKSTHLFNQLAIPLTVLMVFILFLELVNYLFKKHLLEAKTKLVFKQKNETKAQYYNRLTKNINFNKWITIAIFAFVTIVSIVTLTTTPLWLFNLTSVKEFLKNFFNPDFSKFSFTTNQISQNPILLFWNSFSFAITGIVLCVILTLISIRLQSLSLNKTYQVVIFRSINVFIRLIPVIVIFYIFKAIFDNTVTLLIICIALHQMSSQTKQLVELVDNLDQQVINNLKLQGYSNNQIFLKYVLPSIKIEFISLTVFYFELIFRSSITYSILASQDLLIGTQITNHLDPRNFHPQIALAYVWIGTVSILIVNLVGKLIVNKIKK

Crispr_ID: NC_015946_2

• CRISPR_ID: NC_015946_2
• CRISPR_location: 576194-576281
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_015946_2

Consensus_repeat	Method
AGAAGATTAAGTCGGAATTCCGAGTATTT	CRISPRCasFinder

spacers of NC_015946_2

>2.1|576223|30|NC_015946|CRISPRCasFinder
ATTATAAGTATAACAAAAAAGCTAATGTAC

CRISPR arrays and Neighbor proteins around NC_015946_2

CRISPR arrays

The CRISPR arrays of NC_015946_2

>merge|NC_015946|2|576194-576281|CRISPRCasFinder
AGAAGATTAAGTCGGAATTCCGAGTATTTATTATAAGTATAACAAAAAAGCTAATGTACAGAAGATTAAGTCGGAATTCCGAGTATTT

>NC_015946|2|2|576194-576281|CRISPRCasFinder
AGAAGATTAAGTCGGAATTCCGAGTATTT	ATTATAAGTATAACAAAAAAGCTAATGTAC
AGAAGATTAAGTCGGAATTCCGAGTATTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_015946.1|WP_014035222.1|558325_559312_-|mannitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl|CDD|235031
NC_015946.1|WP_014035227.1|568213_569428_-|arginine-deiminase	unknown	unknown	gnl|CDD|234949
NC_015946.1|WP_014035231.1|574888_576181_-|ATP-binding-protein	unknown	unknown	gnl|CDD|224292
NC_015946.1|WP_193363977.1|581033_581591_-|restriction-endonuclease-subunit-S	unknown	unknown	gnl|CDD|341155
NC_015946.1|WP_014035235.1|585350_586469_+|alanine-dehydrogenase	unknown	unknown	gnl|CDD|240630
NC_015946.1|WP_014035232.1|576403_576913_+|restriction-endonuclease-subunit-S	unknown	unknown	gnl|CDD|341144
NC_015946.1|WP_014035223.1|559312_560110_-|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224651
NC_015946.1|WP_014035225.1|565982_566915_-|carbamate-kinase	unknown	unknown	gnl|CDD|237071
NC_015946.1|WP_014035240.1|592215_592902_-|lipoprotein	unknown	unknown	gnl|CDD|234750
NC_015946.1|WP_014035228.1|571002_571923_+|ParA-family-protein	unknown	unknown	gnl|CDD|224113
NC_015946.1|WP_043714059.1|573521_574556_-|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl|CDD|176257
NC_015946.1|WP_014035237.1|587076_588831_-|excinuclease-ABC-subunit-C	unknown	unknown	gnl|CDD|234792
NC_015946.1|WP_049773894.1|565414_565645_-|ATP-binding-protein	unknown	unknown	gnl|CDD|224292
NC_015946.1|WP_014035233.1|577854_581025_-|type-I-restriction-endonuclease-subunit-R	unknown	unknown	gnl|CDD|223683
NC_015946.1|WP_014035239.1|590230_591976_-|ribonuclease-J	unknown	unknown	gnl|CDD|223668
NC_015946.1|WP_014035226.1|567204_568200_-|ornithine-carbamoyltransferase	unknown	unknown	gnl|CDD|179366
NC_015946.1|WP_014035238.1|588849_589986_-|hypothetical-protein	unknown	unknown	unknown
NC_015946.1|WP_014035241.1|594596_596732_-|DUF285-domain-containing-protein	unknown	unknown	gnl|CDD|308794
NC_015946.1|WP_014035236.1|586530_587004_-|transcription-elongation-factor-GreA	unknown	unknown	gnl|CDD|234693
NC_015946.1|WP_146255266.1|563183_565085_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_015946.1|WP_014035222.1|558325_559312_-|mannitol-1-phosphate-5-dehydrogenase	gnl|CDD|235031	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional.	1.37838e-70
NC_015946.1|WP_014035227.1|568213_569428_-|arginine-deiminase	gnl|CDD|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
NC_015946.1|WP_014035231.1|574888_576181_-|ATP-binding-protein	gnl|CDD|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	3.87292e-58
NC_015946.1|WP_193363977.1|581033_581591_-|restriction-endonuclease-subunit-S	gnl|CDD|341155	cd17266, RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Staphylococcus aureus subsp. aureus MSHR1132 S subunit (S.Sau1132ORF3780P) TRD2-CR2. Staphylococcus aureus subsp. aureus MSHR1132 S subunit (S.Sau1132ORF3780P) recognizes 5'... CAAGNNNNNRTC ... 3'. The RM system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. For example S.Sau1132ORF3780P-TRD1 recognizes CAAG/CTTG and S.Sau1132ORF3780P-TRD2 recognizes GAY/RTC. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	3.52859e-19
NC_015946.1|WP_014035236.1|586530_587004_-|transcription-elongation-factor-GreA	gnl|CDD|234693	PRK00226, greA, transcription elongation factor GreA; Reviewed.	6.7276e-61
NC_015946.1|WP_014035232.1|576403_576913_+|restriction-endonuclease-subunit-S	gnl|CDD|341144	cd17255, RMtype1_S_Fco49512ORF2615P-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Flavobacterium columnare S subunit (S.Fco49512ORF2615P) TRD2-CR2. The recognition sequence of Flavobacterium columnare S subunit (S.Fco49512ORF2615P) is undetermined. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	3.87933e-55
NC_015946.1|WP_014035223.1|559312_560110_-|MurR/RpiR-family-transcriptional-regulator	gnl|CDD|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.41116e-30
NC_015946.1|WP_014035225.1|565982_566915_-|carbamate-kinase	gnl|CDD|237071	PRK12353, PRK12353, putative amino acid kinase; Reviewed.	0
NC_015946.1|WP_014035240.1|592215_592902_-|lipoprotein	gnl|CDD|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	2.48193e-05
NC_015946.1|WP_014035228.1|571002_571923_+|ParA-family-protein	gnl|CDD|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	8.19081e-25
NC_015946.1|WP_043714059.1|573521_574556_-|alcohol-dehydrogenase-AdhP	gnl|CDD|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	4.17738e-161
NC_015946.1|WP_014035237.1|587076_588831_-|excinuclease-ABC-subunit-C	gnl|CDD|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	1.79347e-178
NC_015946.1|WP_049773894.1|565414_565645_-|ATP-binding-protein	gnl|CDD|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	2.50544e-06
NC_015946.1|WP_014035233.1|577854_581025_-|type-I-restriction-endonuclease-subunit-R	gnl|CDD|223683	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	2.74976e-94
NC_015946.1|WP_014035239.1|590230_591976_-|ribonuclease-J	gnl|CDD|223668	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair].	2.05837e-131
NC_015946.1|WP_014035226.1|567204_568200_-|ornithine-carbamoyltransferase	gnl|CDD|179366	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated.	0
NC_015946.1|WP_014035241.1|594596_596732_-|DUF285-domain-containing-protein	gnl|CDD|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	1.26029e-61
NC_015946.1|WP_014035235.1|585350_586469_+|alanine-dehydrogenase	gnl|CDD|240630	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains. Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms.	0

Protein sequences

>NC_015946.1|WP_014035231.1|574888_576181_-|ATP-binding-protein
MNFKRDFYLNQLIDKKDNKKVKIITGIRRCGKSYLLFNLFYEYLLSNQVTKDQIITLSLENIDFLEHRNPLKLSEYIKSLIVDKNKKYYVMIDEIQYCEAIKNPYHENSTYQVTFIDVLLSLVKRENLDVYVTGSNSKMLSSDILTQFRGRGDEIRLNPLSFSEVCQLYTDRQQAFKQYCYFGGMPEVYSLKTEQDKKKYLTNLFNEIYIKDIAERNNISNQTEVLNILLDFISSSIGSLTNPSKLMKRFASENKINISANTIKNYLDYFEDAFIIDSSKRYDVKGGRYFSTPLKYYFTDLGLRNARINFRQDEQNHIQENIIYNELKRRGYLVDVGVVIYDNKSSDPRKEVRLEVDFVVNKADKRYYIQSALNIDSFEKKEQEIASLKKINDSFKKIVILGNDTFAKYDDNGILYISVKEFLLNENSIS
>NC_015946.1|WP_043714059.1|573521_574556_-|alcohol-dehydrogenase-AdhP
MKAFVVRESRKWSVELVDIPEPKEKEVLIKMETSGICHTDLHAANYDWLVEPKYPLIPGHEGIGIVAKLGPGCTHLKVGDRVCLAWLHDTCGHCEYCLTGRETLCPDQNMSAYTKDGSFAEYAIGHEDFVGLVPKQLDVITGAPVVCAGVTTYKAVKQAKLKPGNFIVVIGVGGLGQMAIQYAKAMGYRVIGIDIADEKVDLALKSGAEFAFNSKKVNAIEKVIEVTNGGAHGVINTSVASSVTSQGMEMLRRGGRQVLVGLPAKDKLGKDEFAVSIFWTVLLERELAGSIVGTRKDLQEALDYATRGLVKSEVTKIVKLDQVAEIFEKLEKGDFIGRAVIDFR
>NC_015946.1|WP_014035228.1|571002_571923_+|ParA-family-protein
MNNKVVNIISFGRLKGGVGKTTLNLNIAGALANQGKKILVIDFNPQASITQTLRQSVEQVQSVKGSEQWLSNEVSYDELRETIFPSFIENIDFVASTSVLEKQNRELVSKPSREKRLISNIIKIGEEQNLLTNYDHIIIDTNPAFDPITENVYIACAFRDGVIQVVNDDPFSLTGAIKNLKIWEKKYMNDRFSKVPNALKGILVNKVKSNNLLKNIIKTLNSDDFVFKDLVLRTIIIENAAIKKSIFQQNTKQDKIKLDFAINNKKLNNWQKPKWIKENENLNKLINNGNPIANLVLELKDKQIIK
>NC_015946.1|WP_014035227.1|568213_569428_-|arginine-deiminase
MEKKLNVFSEIGTLKTVLVHRPGEEVENLTPELLEKLLFDDVPFKDVAIQEHDAFTKIMRDNGVEVLYIEKLASETLDQHPELREKFIDQFIFEANIEAKYQDKYRDFISSLDNYRMIKKMIAGTKKLELGIDEGNKAYPFVADPLPNVLFQRDPFATVGHGITMNRMWSETRNRETIFPDLVFKHHNRFANQVPYYYQRDWKDQTIEGGDILVLNKETLIIGVTQRTTLKAVEKFSKELFADPESSYAKVIVLDLPKSRAFMHLDTVFTNIDYDKFIAHPLIFDHLDEFKIYEITKKETKEIKKTLIELLTDAVGREVQIIRCGGDDAVAAGREQWSDGTNVITLRPGKVIAYDRNWVTIDLLRKAGVEVLTIASSELSRGRGGPRCMTMPLWREDLQEIKRY
>NC_015946.1|WP_014035226.1|567204_568200_-|ornithine-carbamoyltransferase
MALNLKGRSLLTLLDFTPREIRYLLDLSKDLKKAKYTGNEIKTMQGKNVVLLFQKDSTRTRCAFEVAALDQGAHVTYLGPSGSQFNKKESVADSARVLGRMYDAIQFRGFDQKIVEKLARHSGVPVYNGLTDQFHPTQVLADFLTIEEYKDNLKGLKFVFAGDARNNVSNSLMIGCAKMGMHFVAAAPKELWPTQELVDQCKEIAKETGATINLVDDMKVACKDADVIYTDVWVSMGESEEVWESRIKLLKPYQVNIDAIKVAKPDVIFMHCLPAFHDLNTEVSQEIYKKFGLREMEVTDEVFESKHSVVFEEAENRLHTIKAIMVATIGK
>NC_015946.1|WP_014035225.1|565982_566915_-|carbamate-kinase
MSKIVIAVGGNALGNSPIEQKEIVKKTAKALADFIEQGNDIVIVHGNGPQVGMINNAFDIANKNQQKSPVLDFPECGAMSQGYIGYHLQQAINNELRLRKLNKHIATIVTQTLVDKNDPSFLKPSKPIGSFMSEQEAKMLAKKNLWTVAEDAGRGWRRVIASPKPIDIVEKEILLQLVNNSFITIAGGGGGIPVYLENDKLVGIAAVIDKDFAAAKIAEIIDAESLIILTAIDKVMINYKRPNEQALDSLTISEAENYISEGHFAVGSMLPKIKAAMSFVRQTNGKPVYIGSLEQADKVLQGLSGTKFTK
>NC_015946.1|WP_049773894.1|565414_565645_-|ATP-binding-protein
MLETKVKIISNTVFKNISYFQGSFIISKAKRYDIKGAKYFSTPLKYYFADLCLRNAWLNFSNLDFSHIVKILFLMN
>NC_015946.1|WP_146255266.1|563183_565085_-|hypothetical-protein
MEVIFLKIPWIRKKEPKIEDSNIADFNALTPNVMKEKDIEESYKDSLYFATTNENIFNIAITGAYGSGKSTIWRTYEKNYLRKNNKFSQTLTITFGKYNQNNELDKNDKSKKHDTLFYNRIERQIINDLVVQIDSQVIPLYKNKVQQNFTGSKVFNFFFFFVYFLTVIFVTVMLFILLVYLPNTARTLGIKILISLLLIFVLGIILYVLAYFFWSKLRLRIHKINIKGINIETSTKSLSEETILEKEIKEIIYLIHSSKRKFIVFEDLDRFNDIKIFERLKQINNLVNKHCKIMSSKWRVKFIYMISDAIFDAESRTKFFDFIIPVASVKNSTKVVEEVLAKANKKEISYKKIQSILNVIPNIRLLQNIVNEFKILEPIINKNNKNEITEVLFSALIIKNLLPEEFAELQKQNGVINKIFTNYNNFLNWTNTELNNKLDQNYFALKNLLNLNYLIVSKILELRTEIIKISYENTACIKDNYLNNYKNTSLKENSDPLANLLEGKIDKISVVYKKENQLLSAIYTLDEFNQEFIKTNQSLKTWIDNIKKESIELQTSLKKENNIILNKLTRLKKYSLNELLNILDWEKSKNSNCEKWFSDLNINSEKLYIIKELMNNNFIDEKVHEFLIKNQVF
>NC_015946.1|WP_014035223.1|559312_560110_-|MurR/RpiR-family-transcriptional-regulator
MSIDLLTKIKDLIQTDCSQDYKNIGAFLLKNYQNIRSLTITEISKQCNTNPTQITRFAEKLNLKGFSELKYRLDDISNAIIIDNQFIPISSRIDDKTKFYSDYFEILTQSIKQQESNLKNQPISDVANLINKANKVYLFAFNLSYNVSKNFIQRLRWYKKDAISESDYISIKTYLNTIKPDDLVILITISGENEYIKKIAESLNAKVKIVGIGPKQSSMINLFDKYLYFQTNESELWSINSIKAQLTIQLLDFVYVNWLKSTKNS
>NC_015946.1|WP_014035222.1|558325_559312_-|mannitol-1-phosphate-5-dehydrogenase
MNVIHFGAGNIGRGFIAPILKDVVNHIYFVDNSKKLVDKINNQKIIEIWTSENKKFEIRNISAWQLTDFLNYQDSWDDVGLVTISIGVKNLSNIICYIQQIINYKTFKNQPLVIMCCENGIRVSSWFKTNFYNLKANIYFVDVLVDRIVSNNDLFSDYLKCEDYYLWVVDQTQWPSKIPQINHLTYTNNFDLQIAKKLYMLNAIHCCLGWFVYKNFGFDKLSTVYDALKNHSVLGFVNNYLDEVILVLNHKYQLSFKELNKYKKQIIERLNNNFITDELVRLVRNSELKLSKNERILTILDYARLHDLKHQTILLSYQNGLNYLKDHK
>NC_015946.1|WP_014035232.1|576403_576913_+|restriction-endonuclease-subunit-S
MFEVGRGYVVPKKHIYNSKFGEYIYPIYSSQTTNNGLLGYYNNFLNSNSITWTTDGANAGTVYYREGRFYATNVCGILSRKHFTPNLYLSLSLSKVAYKHVTKVGNPKLMNNVMSSIELTITSNIDEQYKISSLFSNLDSLITFHQRGYNGGKKWKKMTYYYTNIFKIG
>NC_015946.1|WP_014035233.1|577854_581025_-|type-I-restriction-endonuclease-subunit-R
MYFTNEQEFEKAIVNSLQEYGWKGFVDPKNLTKNCDAILNNVTEEQLIRNWKDILSENNKDVLNGIDLSDDEMEQVLNEVRKCNTFVDSNILITGEFIGIKRTNELDQKKYGKQVHLRIFYRHDINAGNNVYQIARQVTTNTISGQKRADLMLLFNGMPLIHIELKNTNNGIEKAINQIKNYSRLGFYRGIFKLVQVVVAMKPNEMIYMPNSNSYKEIVEDKFLKWTDFDNKPVNNWLELVRQFLSIPTAHRMISDYTIADSSDNNLKILGSYQVHAVNKIQDKFFKKEFFQQKTTQSVKGGYVWHTTGSGKTLTSFKLATLLLEWNQADIILFVVDRIELGLQTKNAFKKFNSSSKIDVVEATSTNDLVKQLTTESIKQKLIITSIHKQSRVREENYYKELNKISQKRIVFIFDEAHRTTFGEMYKNITENISNSVLFGFTGTPIRKENAKNDLTTEQNFGQELHKYTMEHGINDGKVLSFNCEYRYIDKVLLPFICVKENYLNNQNDNHKLASEKLNKLKNSFHNQDEQILKFEKDLFSLINNQKQNQMKQEIVKDILDQWKNKSVDKSFSAILATSSIKDAIEYFDIFDQEVQKRAFDLKFSALFDRSTDITEESDDVSKGLGKLESIKKIITRYNKDFNTNFNIQNPNDHNNFKEDVQKRLAQKDPYINLQDEKKLDLLIVVNQLLTGYDSKYINTVYFDKVLEYEHLIQAISRTNRTIKSDKKPNGNVIFFRQPTLMRWNMDEALRLYSGIDPSMAEPKSLDLFCARIDSSFNEIKEIFRMWGYAEFESVPDEEKISEDDAKKLLHEYKELRKNLNSAKILNFNWKKDQEKISMTKDQFQLISTRIKEIDFSKFDNLSVNSGELDLLVELADVDNSSWFIYVDDNYIKSLVLRILDIDEKLLKSESKDLIAEREQLKNTLFKEVYKFPKEYQRYAEIGVHLSISKNLPYTDFSLWEYVRKKVNEENDQKIKDFAIEMNLDENELKKIINSDDIINANGRLDNLCNGKFTQQVKQVLSDKFNTPLFKVKPFKFRNYVQEFIQEQRIKAKKIK
>NC_015946.1|WP_193363977.1|581033_581591_-|restriction-endonuclease-subunit-S
MFCDEKSQFPTIRFKEFTNTWEQEKFNELVKYQSSRMTLKDLTHNEKYDVYDANKIAGKTNNQPITEEYISIIKYGAAAGTTRLLPKNTMVLSTMGVILANNSNIRFIYFLISSKSNFSKEINGSTIPHIYFKDYGKKIYCIPFINEQSKISSLFYNLDSLITLHQRKLELLKNVKNALLEKMFV
>NC_015946.1|WP_014035235.1|585350_586469_+|alanine-dehydrogenase
MKIGLPKEIKAQEFRVGLTPSNVVDLVKAGHEVLVETGAGIGSGFEDAEYQQAGAKITDNVIDVWKQEMIVKVKEPLKAEYKYFYPNQIIFTYFHLADQKELTDELIKNKVVAIAYETIQTSDRKLPLLRPMSEVAGRMAVLTACGLLTRTTKDAIGMVVSGTPGTPKANFTIIGGGVAGAAATRMASSIGANVTIIEFNEDRIRELYDQYADRATILKSNHKNIAEAVKNSDVVISTVLIPGKKAPKLVTEEMVKSMRKNSIIIDVAIDQGASVETIDHPTTHAEPTFIRHDVIHYSVPNIPGAVPRTSTIGLSNATIAYTLEIASKGWKQAARTNNAIKLGLQTVDGKIVYKNVAESLNLAYTNVDEVLN
>NC_015946.1|WP_014035236.1|586530_587004_-|transcription-elongation-factor-GreA
MSQEIILTQEGLEELKLELKNLLEVIRPKVIEELVEARNQGDLSENADYDAARNRQAEVEARIKEVESLINRAKVIEDTKAEKNGEVKIGSTVEFVSNLDKKTREIKIVGAIEADPFSNLISNESPIAKAMLGKKEGTTVEIKDIAKPYKITIKKIK
>NC_015946.1|WP_014035237.1|587076_588831_-|excinuclease-ABC-subunit-C
MDLKEKVNLLPNKPGCYLYLNSLNQVIYVGKAKNLKKRVSSYFNRAHNIKTTRLVREISDLNYFVVNNEKESLILEENLIKKYHPKYNILLNDDKAYPYIVITNQKDPSYKYLRKYDKKALRNYGPLPQKSNARAILLTLQRLFPLKRCNNKDHKPCLYYHLNQCSGACFKDVDFSYYEQQIKQIDKFFKGDISQVKTSLINQMNKASEMLQFEQAQRIKEQLQSLEFITTKQNVEFQSDKNIDIINYQISENKIVFVILFYRAGQLTFKDEYAQDYDQQDLVELLNSFLQQIYAKNITPDVLLVPNDIELLELDENILKFSSHALNKQENLLVNLAKNNAKELILKAAISKNVNVGDEQEILNLLHQISNIKRYPGYIEMFDISNIYNQFITGACVVYKNAKPIRNEFRKYNIDASYTSDFDRLKFMINKRFTKKIQADEKLPDLIIVDGAKIQITAAREILSELNLEIDVIGLVKDQHHKTDKLIDVYGQIIEIKQFKKLYNWLSNIQLRVDQYAKSGFRKKYHNQIQDQLLTIKGIGKKTSQELYKHFKTIDNIKNADFDSLNKVIKNKKSANLVYKHFNK
>NC_015946.1|WP_014035238.1|588849_589986_-|hypothetical-protein
MHKQKSIDQNSTYSQQQKIAIFQPKQKKRKQDSIIWVVSGLGLFTFCLISVARITVIGQFFDDLFFNYLFGWTKYLVYLVLFCWSVQLFFNFKYKFTFKFKLIVFISFILFAIFISLVLLTVLFAQNKIVSSNQVYKVESLWQANLFKQLIGFYNHTWYEHLVFSDNYFTKTSDYLINHNGYFNLYLGSGITGFFSVAILWYFSLPGAYVVYCVLLLLFVVWVFTGDWLKLFKFKNKKSIKALRFFKSAVKNSSINQQVVVDEQNSNDLNFSNTKQDDWDSLQAFNKRGLNNSDLIIELPIYSDFEPEKLKNFEIIWNDKLKTNNNNQNNQEISKTNSNKLAQQVNDYEGLINWYELKTKTHLLDNSFFSDDNFTFNN
>NC_015946.1|WP_014035239.1|590230_591976_-|ribonuclease-J
MPNIRFTAIGGQDERGKNLYVLEINDDFFILDAGLKYPEKGILGIDTVIPKLDYVKQNKKKIKAVFLTNPSAYNIGALGYILKELDVPVYCNEITELLAKIKIERMRLKHKEKFFNVVKDKDIIKVGDTKVEIFRTTSSSPQSFGYAFHTNLGSVIYMGDYIIDGKEQSYFSTDFTHISEISKKGVLAFISDAEFASRTDFTVPNHKIDKYIASPFKDKKTKIVIGIFEEDIYKLSEICMAAIENNRKIAVYGRTMDAILKSNLISKNLVISKSSLISIEEYMKSEDGILIISGTGDDLYSKLMKIATGMDNVVEFTKKDLIILATPPAAGIEKRHAQILDELARTDAKLIALSDKNIWSMRASFEDIKLMTSLLKPKYFIPIKALYKEFLKAEQAAISAGVAPENVGLIDNGETLVLSKKHLAISEHVVEEGNVYVDGVGIGDVGSIVLNERKQLATDGVIIVGATIDARNKELVSLIDTQMRGVLYIQEDNPIFKIIQKEVTNLILEGQAIFKKNPSKYDITEIKKDITNKVRNLVKQESGKNPIVLVIINETDGKVFTSKQLRKKHVFSAKNSQKAKN
>NC_015946.1|WP_014035240.1|592215_592902_-|lipoprotein
MKKLLSILGAVGLIVSTGTVAVACTNKEQKNLNQQQVIVDKFTAEIKKASEEFEQEYNSIIAEAKTKYTAEEWDALIKKLEKIKEKFSKDPNKDFGRIFEEKTKEEAIKEDKVKPGKKITENFEQEYKAKLEKFLQTAKSEAEKKFLTDVFKHNIEVINKAIEDQAKKEAEIIINNTFEEHKKFFEKFKEPIEKLESSKQKYEQAVKKAIENFDREISKIKNLKRDEK
>NC_015946.1|WP_014035241.1|594596_596732_-|DUF285-domain-containing-protein
MHKKTNSNEDQVQLNEIDKKQNDSDNQQSNEENKLSSHNKNKTLKIIGITGLITVLVAAATVTSVVKFCQPRPNNNSDPSPNPTPNVKPNPDADISPKPPTPEPGPSPSPKPDDSNINPTPNPQPTPTPQPSPDPRPDDKPDPQPTPRPEPKPDPQPEPSPAPVPVPPEPPVPPTPEPAPAPGPTPSPEPSPEPVPPTPEPAPAPGPTPSPEPSPEPVPPTPTPPQPTPQPRPEPAPKPPVPEPQPTPDNNELRIKADIEYMKSIWNDHFKNKRSSIETFQDVEDNFKYVLKQVRPKIKELKIEFNNISDKNTKLDLKNNDYKLNVSYDNDLFNLDIGKVNDSTRPIILKVLKSDSNPSSNGKIFSISNWEETNNKKIDPQKTSYEVLQIGYSKVVVFLEPGKSGRDIQIMQMPGQVQDVPPTLPKEITLLKYVFSNSNINSKAIGIENWDTSNIKSMQSAFRMSLFNGDLSKWDTSKVTDMSYMFAFAENFNKPLSSWDTSKVTNMSYMFHKATNFNQPLNTWNTSKVTDMSKIFHGATNFNQALNTWDTSKVTNMSDMFAFAKNFNQPLNSWDTSKVSRMDYMFFGAKNFNQNISNWKTLNVTNMAKMFADAENFNQPLNTWNTSKVIDMRRMFENAKNFNQPLNSWDTSKVSIMESMFENATSFNQDISGWKVQENVKQWKNFDKNTSSNWKQDHKPRFVLNLNITRT

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	NZ_CP020115	Nodularia spumigena UHCC 0039 plasmid pUHCC0039a, complete sequence	59445-59474	5	0.833
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	288722-288751	6	0.8
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	CP002509	Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB26, complete sequence	179646-179675	6	0.8
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	CP002510	Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB28, complete sequence	127753-127782	6	0.8
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	NZ_CP014851	Bacillus thuringiensis strain HD12 plasmid pHD120112, complete sequence	73471-73500	6	0.8
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	NC_018492	Bacillus cereus FRI-35 plasmid p01, complete sequence	71794-71823	6	0.8
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	MG557618	Staphylococcus phage HSA30, complete genome	17072-17101	6	0.8
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	LR215718	Staphylococcus phage Stab20 genome assembly, chromosome: I	59541-59570	6	0.8
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	MH159197	Staphylococcus phage VB_SavM_JYL01, complete genome	32256-32285	6	0.8
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	MK250904	Staphylococcus phage VB-SavM-JYL02, complete genome	30828-30857	6	0.8
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	NC_025416	Staphylococcus phage MCE-2014, complete genome	61158-61187	6	0.8
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	KM216423	Staphylococcus phage P108, complete genome	138166-138195	6	0.8
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	NC_019448	Staphylococcus phage GH15, complete genome	59321-59350	6	0.8
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	MG721208	Staphylococcus phage vB_SauM_LM12, complete genome	87522-87551	6	0.8
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	MN304941	Staphylococcus phage vB_SauH_IME522, complete genome	120328-120357	6	0.8
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	NZ_CP019718	Paenibacillus larvae subsp. larvae strain Eric_V plasmid unnamed1, complete sequence	1251-1280	7	0.767
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	MT411892	Staphylococcus phage Metroid, complete genome	57954-57983	7	0.767
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	MH107769	Staphylococcus phage vB_SauM_0414_108, complete genome	58730-58759	7	0.767
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	JX080302	Staphylococcus phage 676Z, complete genome	61716-61745	7	0.767
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	MK533143	Paenibacillus phage vB_PlaP_API480, complete genome	44698-44727	7	0.767
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	MN693268	Marine virus AFVG_25M194, complete genome	46429-46458	7	0.767
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	KP687432	Staphylococcus phage IME-SA2, complete genome	51799-51828	7	0.767
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	AB853331	Staphylococcus phage S25-4 DNA, complete genome	62063-62092	7	0.767
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	MK331930	Staphylococcus phage CH1, complete genome	19374-19403	7	0.767
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	JX080305	Staphylococcus phage P4W, complete genome	60773-60802	7	0.767
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	MT554104	Staphylococcus phage ESa1, complete genome	59810-59839	7	0.767
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	NC_022920	Staphylococcus phage S25-3 DNA, complete genome	57196-57225	7	0.767
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	NC_019726	Staphylococcus phage JD007, complete genome	29000-29029	7	0.767
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	NC_047721	Staphylococcus phage SA5, complete genome	12376-12405	7	0.767
NC_015946_2	2.1|576223|30|NC_015946|CRISPRCasFinder	576223-576252	30	NZ_LR134399	Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence	196143-196172	8	0.733

1. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to NZ_CP020115 (Nodularia spumigena UHCC 0039 plasmid pUHCC0039a, complete sequence) position: , mismatch: 5, identity: 0.833

attataagtataacaaaaaagctaatgtac	CRISPR spacer
cttataagtataacaaaaaggctatttaac	Protospacer
 ******************.**** *  **

2. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

attataagtataacaaaaaagctaatgtac	CRISPR spacer
gttatgagtataacaaaaaagcaaatcaaa	Protospacer
.****.**************** ***  * 

3. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to CP002509 (Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB26, complete sequence) position: , mismatch: 6, identity: 0.8

attataagtataacaaaaaagctaatgtac	CRISPR spacer
gttatgagtataacaaaaaagcaaatcaaa	Protospacer
.****.**************** ***  * 

4. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to CP002510 (Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB28, complete sequence) position: , mismatch: 6, identity: 0.8

attataagtataacaaaaaagctaatgtac	CRISPR spacer
gttatgagtataacaaaaaagcaaatcaaa	Protospacer
.****.**************** ***  * 

5. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to NZ_CP014851 (Bacillus thuringiensis strain HD12 plasmid pHD120112, complete sequence) position: , mismatch: 6, identity: 0.8

attataagtataacaaaaaagctaatgtac	CRISPR spacer
gttatgagtataacaaaaaagcaaatcaaa	Protospacer
.****.**************** ***  * 

6. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to NC_018492 (Bacillus cereus FRI-35 plasmid p01, complete sequence) position: , mismatch: 6, identity: 0.8

attataagtataacaaaaaagctaatgtac-	CRISPR spacer
gttgtaagtttaacaaaaaagct-atttgca	Protospacer
.**.***** ************* ** *.* 

7. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to MG557618 (Staphylococcus phage HSA30, complete genome) position: , mismatch: 6, identity: 0.8

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgaat	Protospacer
***** ***************  .*** *.

8. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to LR215718 (Staphylococcus phage Stab20 genome assembly, chromosome: I) position: , mismatch: 6, identity: 0.8

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatggat	Protospacer
***** ***************  .*** *.

9. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to MH159197 (Staphylococcus phage VB_SavM_JYL01, complete genome) position: , mismatch: 6, identity: 0.8

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgaat	Protospacer
***** ***************  .*** *.

10. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to MK250904 (Staphylococcus phage VB-SavM-JYL02, complete genome) position: , mismatch: 6, identity: 0.8

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgaat	Protospacer
***** ***************  .*** *.

11. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to NC_025416 (Staphylococcus phage MCE-2014, complete genome) position: , mismatch: 6, identity: 0.8

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgaat	Protospacer
***** ***************  .*** *.

12. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to KM216423 (Staphylococcus phage P108, complete genome) position: , mismatch: 6, identity: 0.8

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgaat	Protospacer
***** ***************  .*** *.

13. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to NC_019448 (Staphylococcus phage GH15, complete genome) position: , mismatch: 6, identity: 0.8

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgaat	Protospacer
***** ***************  .*** *.

14. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to MG721208 (Staphylococcus phage vB_SauM_LM12, complete genome) position: , mismatch: 6, identity: 0.8

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgaat	Protospacer
***** ***************  .*** *.

15. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to MN304941 (Staphylococcus phage vB_SauH_IME522, complete genome) position: , mismatch: 6, identity: 0.8

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgaat	Protospacer
***** ***************  .*** *.

16. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to NZ_CP019718 (Paenibacillus larvae subsp. larvae strain Eric_V plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

attataagtataacaaaaaagctaatgtac-	CRISPR spacer
tttataagtataacagaaaagc-gctggata	Protospacer
 **************.****** . ** *. 

17. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to MT411892 (Staphylococcus phage Metroid, complete genome) position: , mismatch: 7, identity: 0.767

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgggt	Protospacer
***** ***************  .*** ..

18. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to MH107769 (Staphylococcus phage vB_SauM_0414_108, complete genome) position: , mismatch: 7, identity: 0.767

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgggt	Protospacer
***** ***************  .*** ..

19. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to JX080302 (Staphylococcus phage 676Z, complete genome) position: , mismatch: 7, identity: 0.767

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgggt	Protospacer
***** ***************  .*** ..

20. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to MK533143 (Paenibacillus phage vB_PlaP_API480, complete genome) position: , mismatch: 7, identity: 0.767

attataagtataacaaaaaagctaatgtac-	CRISPR spacer
tttataagtataacagaaaagc-gctggata	Protospacer
 **************.****** . ** *. 

21. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to MN693268 (Marine virus AFVG_25M194, complete genome) position: , mismatch: 7, identity: 0.767

attataagtataacaaaaaagctaatgtac	CRISPR spacer
atgcgaagtataacgaaaaagctaaagtgg	Protospacer
**   *********.********** **. 

22. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to KP687432 (Staphylococcus phage IME-SA2, complete genome) position: , mismatch: 7, identity: 0.767

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgggt	Protospacer
***** ***************  .*** ..

23. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to AB853331 (Staphylococcus phage S25-4 DNA, complete genome) position: , mismatch: 7, identity: 0.767

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgggt	Protospacer
***** ***************  .*** ..

24. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to MK331930 (Staphylococcus phage CH1, complete genome) position: , mismatch: 7, identity: 0.767

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgggt	Protospacer
***** ***************  .*** ..

25. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to JX080305 (Staphylococcus phage P4W, complete genome) position: , mismatch: 7, identity: 0.767

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgggt	Protospacer
***** ***************  .*** ..

26. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to MT554104 (Staphylococcus phage ESa1, complete genome) position: , mismatch: 7, identity: 0.767

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgggt	Protospacer
***** ***************  .*** ..

27. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to NC_022920 (Staphylococcus phage S25-3 DNA, complete genome) position: , mismatch: 7, identity: 0.767

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgggt	Protospacer
***** ***************  .*** ..

28. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to NC_019726 (Staphylococcus phage JD007, complete genome) position: , mismatch: 7, identity: 0.767

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgggt	Protospacer
***** ***************  .*** ..

29. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to NC_047721 (Staphylococcus phage SA5, complete genome) position: , mismatch: 7, identity: 0.767

attataagtataacaaaaaagctaatgtac	CRISPR spacer
attattagtataacaaaaaaggagatgggt	Protospacer
***** ***************  .*** ..

30. spacer 2.1|576223|30|NC_015946|CRISPRCasFinder matches to NZ_LR134399 (Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.733

attataagtataacaaaaaagctaatgtac	CRISPR spacer
ccaatagctataacaaaaaagctaatactc	Protospacer
 . ***. ******************.. *