CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_018012	Thiocystis violascens DSM 198, complete sequence	16 crisprs	RT,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas6,csa3,DEDDh,DinG,csx16,cas4,cmr3gr5,cas10,cmr1gr7,csx1	2	48	18	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_018012_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018012_1

184209-184295

Orphan

Consensus_repeat	Method
ACCACGAACGGCTTCAGGCTCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018012_1

>merge|NC_018012|1|184209-184295|CRISPRCasFinder
ACCACGAACGGCTTCAGGCTCCAAGTTCGAGGATTTTCCGTTCGTTCTGAGTCCTGAGGGTCGAACCATGAACGGCTTCAGGCTCCA

>NC_018012|1|1|184209-184295|CRISPRCasFinder
ACCACGAACGGCTTCAGGCTCCA	AGTTCGAGGATTTTCCGTTCGTTCTGAGTCCTGAGGGTCGA
ACCATGAACGGCTTCAGGCTCCA

Protein	Signature genes	Signature genes Name	Protein_function
NC_018012.1\|WP_014776766.1\|191341_191956_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014776767.1\|191952_193812_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014776762.1\|186825_187284_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014776756.1\|179619_179952_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_041446756.1\|181183_181630_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271142
NC_018012.1\|WP_014776769.1\|195775_196318_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_052314928.1\|178341_178830_-\|flavodoxin	unknown	unknown	gnl\|CDD\|236439
NC_018012.1\|WP_014776753.1\|176410_177754_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225805
NC_018012.1\|WP_014776758.1\|182598_183693_-\|imelysin-family-protein	unknown	unknown	gnl\|CDD\|271142
NC_018012.1\|WP_014776763.1\|187304_188522_-\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|224376
NC_018012.1\|WP_014776765.1\|190148_191333_-\|PilT/PilU-family-type-4a-pilus-ATPase	unknown	unknown	gnl\|CDD\|225364
NC_018012.1\|WP_014776757.1\|180195_181182_-\|DUF1513-domain-containing-protein	unknown	unknown	gnl\|CDD\|377834
NC_018012.1\|WP_014776760.1\|183874_184114_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_157174332.1\|194228_195722_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225076
NC_018012.1\|WP_157174333.1\|196850_197786_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225076
NC_018012.1\|WP_014776761.1\|184330_186511_-\|DUF3438-family-protein	unknown	unknown	gnl\|CDD\|274175
NC_018012.1\|WP_083845652.1\|181708_182278_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271142
NC_018012.1\|WP_014776759.1\|183706_183856_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014776755.1\|179151_179442_+\|HigA-family-addiction-module-antidote-protein	unknown	unknown	gnl\|CDD\|274228
NC_018012.1\|WP_014776764.1\|188523_190149_-\|type-II/IV-secretion-system-protein	unknown	unknown	gnl\|CDD\|225363

Protein	Function_ID	Function_description	E-value
NC_018012.1\|WP_014776755.1\|179151_179442_+\|HigA-family-addiction-module-antidote-protein	gnl\|CDD\|274228	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family. Members of this family form a distinct clade within the larger family HTH_3 of helix-turn-helix proteins, described by pfam01381. Members of this clade are strictly bacterial and nearly always shorter than 110 amino acids. This family includes the characterized member HigA, without which the killer protein HigB cannot be cloned. The hig (host inhibition of growth) system is noted to be unusual in that killer protein is uncoded by the upstream member of the gene pair. [Regulatory functions, DNA interactions, Regulatory functions, Protein interactions, Mobile and extrachromosomal element functions, Other].	1.17188e-32
NC_018012.1\|WP_041446756.1\|181183_181630_-\|hypothetical-protein	gnl\|CDD\|271142	cd14659, Imelysin-like_IPPA, Imelysin-like protein. This family includes insulin-cleaving membrane protease (imelysin, ICMP)-like protein (IPPA from Psychrobacter arcticus), the Pseudomonas aeruginosa PA4372 and Vibrio cholera VC1266 Fur-regulated imelysin-like protein. They share the overall fold and a similar functional site as the insulin-cleaving membrane protease (ICMP). However, IPPA adopts a structure distinctive from the known HxxE metallopeptidases or iron-binding proteins, suggesting this protein may not be a peptidase; the histidine in the GxHxxE motif region is no longer conserved (GxxxxE), indicating a possible loss of enzymatic function or a change in substrate preference (compared to imelysin and IrpA families). A putative functional site for this non-peptidase homolog is located at the domain interface. The tertiary structure shows a fold consisting of two domains, each of which consists of a bundle of four helices that are similar to each other, implying an ancient gene duplication and fusion event.	2.30524e-07
NC_018012.1\|WP_014776753.1\|176410_177754_-\|hypothetical-protein	gnl\|CDD\|225805	COG3266, DamX, Uncharacterized protein conserved in bacteria [Function unknown].	6.12337e-07
NC_018012.1\|WP_014776758.1\|182598_183693_-\|imelysin-family-protein	gnl\|CDD\|271142	cd14659, Imelysin-like_IPPA, Imelysin-like protein. This family includes insulin-cleaving membrane protease (imelysin, ICMP)-like protein (IPPA from Psychrobacter arcticus), the Pseudomonas aeruginosa PA4372 and Vibrio cholera VC1266 Fur-regulated imelysin-like protein. They share the overall fold and a similar functional site as the insulin-cleaving membrane protease (ICMP). However, IPPA adopts a structure distinctive from the known HxxE metallopeptidases or iron-binding proteins, suggesting this protein may not be a peptidase; the histidine in the GxHxxE motif region is no longer conserved (GxxxxE), indicating a possible loss of enzymatic function or a change in substrate preference (compared to imelysin and IrpA families). A putative functional site for this non-peptidase homolog is located at the domain interface. The tertiary structure shows a fold consisting of two domains, each of which consists of a bundle of four helices that are similar to each other, implying an ancient gene duplication and fusion event.	1.06865e-51
NC_018012.1\|WP_014776763.1\|187304_188522_-\|type-II-secretion-system-F-family-protein	gnl\|CDD\|224376	COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion].	6.19091e-96
NC_018012.1\|WP_014776765.1\|190148_191333_-\|PilT/PilU-family-type-4a-pilus-ATPase	gnl\|CDD\|225364	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].	4.09689e-137
NC_018012.1\|WP_014776757.1\|180195_181182_-\|DUF1513-domain-containing-protein	gnl\|CDD\|377834	pfam07433, DUF1513, Protein of unknown function (DUF1513). This family consists of several bacterial proteins of around 360 residues in length. The function of this family is unknown.	8.59404e-75
NC_018012.1\|WP_157174332.1\|194228_195722_-\|hypothetical-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	0.00241972
NC_018012.1\|WP_157174333.1\|196850_197786_-\|hypothetical-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	1.85874e-06
NC_018012.1\|WP_014776761.1\|184330_186511_-\|DUF3438-family-protein	gnl\|CDD\|274175	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D. In Gram-negative bacteria, proteins that have first crossed the inner member by Sec-dependent protein transport can be exported across the outer membrane by type II secretion, also called the main terminal branch of the general secretion pathway. Members of this family are general secretion pathway protein D. In Yersinia enterocolitica, a second member of this family is part of a novel second type II secretion system specifically associated with virulence (See ). This family is closely homologous to the type IV pilus outer membrane secretin PilQ (TIGR02515) and to the type III secretion system pore YscC/HrcC (TIGR02516). [Protein fate, Protein and peptide secretion and trafficking].	8.48295e-38
NC_018012.1\|WP_083845652.1\|181708_182278_-\|hypothetical-protein	gnl\|CDD\|271142	cd14659, Imelysin-like_IPPA, Imelysin-like protein. This family includes insulin-cleaving membrane protease (imelysin, ICMP)-like protein (IPPA from Psychrobacter arcticus), the Pseudomonas aeruginosa PA4372 and Vibrio cholera VC1266 Fur-regulated imelysin-like protein. They share the overall fold and a similar functional site as the insulin-cleaving membrane protease (ICMP). However, IPPA adopts a structure distinctive from the known HxxE metallopeptidases or iron-binding proteins, suggesting this protein may not be a peptidase; the histidine in the GxHxxE motif region is no longer conserved (GxxxxE), indicating a possible loss of enzymatic function or a change in substrate preference (compared to imelysin and IrpA families). A putative functional site for this non-peptidase homolog is located at the domain interface. The tertiary structure shows a fold consisting of two domains, each of which consists of a bundle of four helices that are similar to each other, implying an ancient gene duplication and fusion event.	6.45793e-20
NC_018012.1\|WP_052314928.1\|178341_178830_-\|flavodoxin	gnl\|CDD\|236439	PRK09267, PRK09267, flavodoxin FldA; Validated.	2.49139e-63
NC_018012.1\|WP_014776764.1\|188523_190149_-\|type-II/IV-secretion-system-protein	gnl\|CDD\|225363	COG2804, PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion].	1.98975e-154

>NC_018012.1|WP_014776760.1|183874_184114_-|hypothetical-protein
MRGCIPGGRLCGAVGALSALLLLAGCATPLPAGEDPDSTRYTDPTVAQALEREGYYVALGDGMTLPERVFIYTSGEAAR
>NC_018012.1|WP_014776759.1|183706_183856_-|hypothetical-protein
MGESDTFAPGSAPVPVLPLPWLPYGEDDMSFMRLDQADRAALLFFLESL
>NC_018012.1|WP_014776758.1|182598_183693_-|imelysin-family-protein
MTRNADYPAALPSLSALTLTALLLTPGTPTAADSAAPTESQVLATFSLTGVRPTLSDLANAGANLTGAVRALCERPDAAGLERARAAWRTAYLAWRRAEPFQFGALKALELGKRIGKEPANTTVLDGAVTSPELGHLLRSPDARGYAAAEFLLFVPGDARTATRDQRCAHLTDTTAEIADLTALALAVWRQESESGFRAAGDGAPFLLPGDALSLPIAEALNVTERMLRDRIGPASGFFEGPADPERLEAWHSGTSREALRASLEGLRLLMLGDGATGVAALVATRDGVLSRKDPKLAARLERRFAKSIAELDDTGRPLHEELRDQPNRLKRLYREVERLQKDIEEVTLVLELDVLPTNMQPAF
>NC_018012.1|WP_083845652.1|181708_182278_-|hypothetical-protein
MIRRHPPSGVPTGLVWLALAGALAAAGCSDPTAPIAPAKPQAVLSALVNQGAVPTMTRLAKEGKTLDETVRQLCRHPADVELERARDAWRSTYLAWRAAAPYLFGLADEVTMKRRLGSWPVNAVVLDHAVASDKFGHMRGADDLRGYAAVEYLLFLPVEAGAATADQRCAHLTDLTREIMDLTAGVSQR
>NC_018012.1|WP_041446756.1|181183_181630_-|hypothetical-protein
MIFAEGLNVTERLLWERIGVPSGFFRGESSLKLEMIEAPHAGIARAGLRETLESLHRLAAGAEGQPGLAALIAGLEPERAADMISRGERALAELEPDTAEAAETLSATLHREPSRLKGVYRQVQALQDQIAGTGETLALPIQTHQDGD
>NC_018012.1|WP_014776757.1|180195_181182_-|DUF1513-domain-containing-protein
MRDPLDRRRRRLLAGLGLAALPLPRLGWTKSAEALPEGRLVSAFYAGKGEARRDWLVWSEPAGTRGGRLELPLRGHGLCRHPGKPDHVVCFARRPGDRLWEIDLKRGAITADVPADEGHYFFGHGVFSHDGTRLYTTENRYRDSTGLVRVRDAQDYRVLDEMPSGGIGPHDVRLLSDGRTLAVANGGIETHPDLRRRKLNLATMDPSLAYLDSASGRILEQHRLPHHQLSIRHLGVGASGTALVTCPKSNLVTLWNLTEARLIASYDIRQPYGAALACDGAYLITGATGEVHRLIPGGTPERIHTATGVWDNHLLWLDPTQAARDGVA
>NC_018012.1|WP_014776756.1|179619_179952_-|hypothetical-protein
MLKKLLLVVALIIVVGGGYLLYEGRILERNSTLSDQVSGLAYRTGLDGALGSLRELMAKASAFISNRGFERQSERTYRERWCQRGDRTACTELCDQFGDLFACERFKRRE
>NC_018012.1|WP_014776755.1|179151_179442_+|HigA-family-addiction-module-antidote-protein
MDRIKNIHPGEVLREEFLEPMGISQYRLVKQIGIPAMRISEICAGKRAITADTALRFSRALGTTSGFWLSLQADYDTEEVLRARGDELSRIQPLAA
>NC_018012.1|WP_052314928.1|178341_178830_-|flavodoxin
MIKKRFDDETMDAPVNINRVSAEQFCFYSHLILGTPTMGEGQLPGLGAACSEESWEEALDRFAEVDLTGKTVALFGLGDQVGYPMEFVDGLRDLYDFIVERGTTVVGAWPTTGYDFEASRAVNDEETHFVGLALDQDNQADQTAERLEAWLALIAPEFSLSL
>NC_018012.1|WP_014776753.1|176410_177754_-|hypothetical-protein
MGNEKKIDPRAQTNNAETTLPRSAVTPTAGDTLSGRNSPLGQAARGAGIPPVGGRDAQLAHDRDSRKDERGWPAAARGNDAAPGYESRDLLRRLTEQATQINTLKSSVEQQRADIRKTESSLMTRLAGVDEDRRLTASQSQKTWQSNREEIDGSLRRQGTMTAIGFLLFGVLVAVAMAFLYSRFENGRKAAVDEIAELRQAIQQVQVKLPDNVAQNQLTQEKLLNLSLAIKSMSKTLDSLGEAAPVSEASGKEPADSGSSTDATQQEAKAKADAEMIAKAEADARAAKEKAEADARQAKAEADSRPLQAHEPTPPREPSRASESAPTPNEKAPDTPLVSNAAESAAEPVSGNIRVGETPYSLQLIGFFSLEKLLSYTRIAPLPSRVYYKQETYRGRPWFALIHSLHASRESANAAISDLPAELAKLDLWVRQLDPNSSLTPLKADSD
>NC_018012.1|WP_014776761.1|184330_186511_-|DUF3438-family-protein
MRHLLFFIACLSLCAVAPAHSAASDVTMPLREIEFSDASVQDAIRVIAEQTGVNIVATREAGGRRFTLFLRALTVREAIDSIARVAGLWYRFNDKTGVYLVMTTEEYFRDITVFREEKTEVFTLKFQNVLKVANTVQAMFGEDRVSLDVDNSNDDLDLPGATLNAEFSNSTSGRGRGGSRGRNTSQGRGSGRKASVDETLQGMTQDQIQRLEQTKLAPGEDPLMLSEETIIKVRKQESQSPIYLAINREHNQLFARTSDEQAMVEIRRLVAESDRPTPQVLLEMKVLSVTLDDEFQYAFDFSFGSEVKLTGPNDGQPPNPLSPESALGSEGTIGSVNSSLMAGSTFVFQAMNDKVRARLQLMERDGRVNILATPLLLAANNRPAKIFIGEQAVLTTGFTAQTSTSAGSGGVGNTFITTPVPETETVEVGNTLTILPSINADRTVVMRMLQEASRIKTDGGMIPVVAGGAVTQVAIDTVDISTMEGTAMAKDGLAVVVGGMITETTSNGERKVPVLGDVPMLGALFKQVDRTKKREQLILLITPHVFSTPEEAEAVSRHRLGDVARTPSEIDVYLDRLERTRSRNARGRVDNAAIRAAAPEPIAPRSAREPAYLALTRFAAERIRSPRLLQRAHANVENVQLTNNRPFHLVADATVEATPKRGWRDGGLFVTAVVARNRGTLTNTLDERRFKGQWLAAAAQTPTLAPGERTHVFLISDRPFHEVAVP
>NC_018012.1|WP_014776762.1|186825_187284_-|hypothetical-protein
MQLHEVQRARRRARVLPSAAAILAVLLAAPQWSGVRAQTADRPGYRGDARNPFDLTAPILKRFSDSEAKVGFQNAEGNAPAPKMKLKGMVMLQNGNKAALLEVQGVGTHVVREGDTIGINVASPNAVIRVKRIDRMQIEVEVGSMRQVILVR
>NC_018012.1|WP_014776763.1|187304_188522_-|type-II-secretion-system-F-family-protein
MPVFEYLALDASGAERVGHIEAADERTAALQLREAKIFALSIRDPQAAGRDESGVSRFAPKRYLSTSQGDLVFLFRQLALMLRAGHTVVQALEANREMAVKFQLRKALGRMRDLIEDGGSLSRALAAEKQVFPPMVSKLIEAGEKSGEIDDILERLADDIERRVDIKRQLMTALTYPSLVFLVAVGVSAALVGWVIPRFAVFLGARGVELPPVTQFLMDLAGWFQDWGAIFGGGVGLFIFAALASYTTKGGKRVIDGLMLKIPVVGGTLRSASLGQAASMLAMQLRSGITLLQSLSIAAGVIGNQAFADAFEQAGERILGGQPLSIALRAKVMPPLVRHMAAIGERSGELEAVMQSLADYYRKDLQARVKVMAAWVEPVMILIVGGMVGTVYLAFFQAALKVSTK
>NC_018012.1|WP_014776764.1|188523_190149_-|type-II/IV-secretion-system-protein
MAVTEASLIEAGIAAGLVDPETLPTLRLQARRERIRLLEAVTRAGRFPEAALYQALARQRGMIFLLPKDLVAVPELLEKLPDNVLQRRPMLPVRRDGELLLALGDPDDRLSPEIAERATGERLRPALAAPEALRAALRRQRGGGPLLATPEASGQDATGLLDTLMKDAYLRRATDLHFEPEQYAVRVRERVDGHLLEYPRPLTLQEGEAVVTRIKVLANLDIGEQRLPQDGSMSYRLSQWDTPPMDVRVATAPTRWGERVTMRLLGAGTTGLNLERLGMPPPILGPFREAINRPYGIILVTGPTGSGKSTTLYAALRELDADDLNILTVEDPIEQVVAGISQVQVSTKVDFALALRSFLRHDPDVILVGEVRDLETAETAMKAAMTGHLVLATLHTNDAVGAVTRLADIGVPYYLIGATLIGVMAQRLVRRLCQQCREPYTPDADERRRLGGTLPEELTLYRPVGCPACLGTGFAGRVGLYEALWVDRPLGELIATGAREDLIRQTATDRYYTLWQDGCSKVLEGAVTLAEVERLVPPDAR
>NC_018012.1|WP_014776765.1|190148_191333_-|PilT/PilU-family-type-4a-pilus-ATPase
MSVTALEPVGLNLDALLAAGVSLGASDLHLTVGSRPSYRILGELAPAPPELGEALVGHDAMERLAARLATERQREDLAQTGHLDLGYGAPDGERFRLNLFREQGHLALAARHLDQGLLSLDRLGLPPQLEEVGRLNAGLVLVTGATGSGKSTTLATLLDRINETRAAHILTVEDPVEFVHRPKRCVVHHRELGRDVASFAAAVQASLREDPDVIMIGEMRDLDTMRAAITAAETGHLVFSTLHTAEAVGCVERLVGSFPGGEQDVARHRIGMSLKAVIAQRLLRRSSGRGRVAAVEILMVNPAAANLIEQGKTRQLFSLIESSAAEGMRTMDQSLAELVHRGILSRAEALVHCKDAQTLERQIERAARLVEQAALAEQTAAKRGGLLPRPRRQP
>NC_018012.1|WP_014776766.1|191341_191956_-|hypothetical-protein
MKLKQTWQALPPADRLRWLAIGTAIAVGLYGLLIFPFANRELTKSTALVARRTDRIEKRAQVPQVDVGTAAALQGKLPKIVKQKEALEARYGELAGRFTPGDTPGAHQLLLLELNTLAESSGIQLLKQGDESDGRRGLTPLRDQESGRPYMRVQGAGDYWGLLAFLRGLGNLNYASAPLGVELRTEGEPKAQQSMLNISIDVTL
>NC_018012.1|WP_014776767.1|191952_193812_-|hypothetical-protein
MKNPLSQLNTIQIGKPGRVLVLHSDGYRLTAALVQTGVTGATIRARALSLAIDPQVAVAEALEGLRARGVRRLPKKAVLMSASAVTALLDLPVDPEHPRPREQMHELVRWELESLFSEQNLFWTIGAPLMGRGYLTPEQRSAVAERQALQALDAEALPKEAGPRVKARFGDVAVEAELVTRDQVEECVELRDQLFRADDQLVCGWVGQSRPLEEDSDDDEEDARGFSWLALAVPESLRRAWVKACQRQGIFLDTAYAILGAGFVTLEASPGAETLYLEVHPEQFAVMRGRPGALRSLRVGNTRNGRLPPEDAAGLCREELTPEIRQIHLRAPEDQAAELSEALADLLGLEVVRAGDDAALSEPESAPVSLDKGARRFWRARAADTASARPAAAPETPPRDAIADEILAVARHVLGTVPRAALASVAAQPARAPLWKRRDLLPYAAAAAVLMAVLANDVRMRVAIWDNDRELERLDALYEEQLEQKRTANEILAEANRLQAEIAAAERVIADLTGKVTAMERLAARRERLPRVLEQIAAACGDELYLHEIKLPPTPGALVQLRGWALNSTAAQLFVTNLNNTLGELKGTVRNSRIVAGPGPRAISGYQIEVLLAFGESGT
>NC_018012.1|WP_157174332.1|194228_195722_-|hypothetical-protein
MTLLELLVVVALMSVVGFMALSQVGDDLGQARYQDTKNRLEMIRKAIIGDTSRTLNGQPEIRGFVADMGRLPRNLTELLTREYCQGHREVRTQTDCETYYPATPSNWLELPESTINVDTGLRAGWNGPYLVATADEDGAPVYRDGWGNDDGTDNFGWRFDPLVPPSTPYDLIIQSYGMDGKPGGDLLYEEDYPPAGSETLVYNNEYCVLITDWDGTPSDDNGQGITVDFGSYGSSVSCSDGGFVDAATCLRYGGACRVINYWDDGMDTSNDCNNYGQDITTQWVTQINQGWSCDPPAKDEAQCTGTWEWRIRPGGVCNLPERRTPADCEGDANGVWVAPANVCRNSTNGDIVGFQANGDYSIVDQADCSLSNQFWSLMPAAYILGTGTANNNLCLRVAYRENGEIKQMPSSGSGNQLELNSNGNRQVHTFTFGGDTDPYDTDTYLHLGEMAYRFYRIDNTDCSISPSTVPVVMTTWRRFTLIPGTVRLVLPGSWPIN
>NC_018012.1|WP_014776769.1|195775_196318_-|hypothetical-protein
MKNRIKTLAARIGALSLALGLPLMTPGGAAAQTAPAAPDQPPTVAQPQAEPQYQDIDIDQLIKGARPEKKGTSAFFKPSPVRFGARIKQEPRKRDTDYLYTALSFFPLDPEPKVSHRMFVETPGGHILPVYVEDTQVEGIKRLGEGTATLFTGWHVYNYSKGPAILIVGYERAPLAMVQP
>NC_018012.1|WP_157174333.1|196850_197786_-|hypothetical-protein
MTLLELLVTVAILAAVAGIGALNLTGVIEDNKEQLARVEMQEIAKAIRQFKQDTGYYPKQGPFGLALTVGSTTYSGGVNESTIPDHASRTPAENAAWFYSPANFWQLFECPIITNPLPPPAPQWPVWLGCTGSEEQSWDASRGRGWRGPYLRRDSQSLVDLSDDLKTNGIGSPIEDGGTAKLVAEAIGIADPFGDTDPVKADPNFDVFHKFDDGSKYDRWLLDWRSTHNAYPREVAINKKINGYYLGRIGGPYFVFDLAETPAGLRPRLVSMGQNGRYGGVNGVDPCERGNSGDEGNDPDDDHDDIVLCLE

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Crispr_ID: NC_018012_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018012_2

480145-482861

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCTCGCGGGGATGAACCG	PILER-CR
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CRISPRCasFinder
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CRT

44 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NC_018012_2

>merge|NC_018012|2|480145-482861|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCTCGCGGGGATGAACCGTAGGAGGACAGGACTCGCCCTTACGCGGCGATGTGTTCCCCGCGCTCGCGGGGATGAACCGTGACGGCGACGGGCGGGGCGATTGGGCCTGCTGTGTTCCCCGCGCTCGCGGGGATGAACCGCTATGACGATGCCGTCGACGCGATCAACGCGGGTGTTCCCCGCGCTCGCGGGGATGAACCGATCCAATCTTGGTCGTCAACGCGTTCATGTCTGTGTTCCCCGCGCTCGCGGGGATGAACCGGTAAGAGCCTCCGTTATTCGCCGTGATATTTAGTGTTCCCCGCGCTCGCGGGGATGAACCGGCTATCAGTGGATGGGCGCCGGCGGCAATGTTGTGTTCCCCGCGCTCGCGGGGATGAACCGGCAAGGGCACCGGCGAGGTCGCCGACCAGATGGTGTTCCCCGCGCTCGCGGGGATGAACCGATTCTCGACTCGAATCGTTGCTGCTCGCGGACGTGTTCCCCGCGCTCGCGGGGATGAACCGTTCCGGCCCCATCTCGCCGACAATTCGCAAGCGTGTTCCCCGCGCTCGCGGGGATGAACCGTGACCTGCATGATTTTCCCGTCAAAGCGCATCGTGTTCCCCGCGCTCGCGGGGATGAACCGGTCGGCGCCGGATTCGGGCGCGTGCGTCGATGGTGTTCCCCGCGCTCGCGGGGATGAACCGTCTTCAGCCATCTTGCGCGCCTCTCGCATGGCGTGTTCCCCGCGCTCGCGGGGATGAACCGCTTTCGACGGCATGGCGGACGTCTCCAACGCCGTGTTCCCCGCGCTCGCGGGGATGAACCATGACCGCCGAAAAGGAAGACGCGCGCATGACCGTGTTCCCCGCGCTCGCGGGGATGAACCGCTCGAACCCGGCATGCTTCCAGTCACCGGAGAGTGTTCCCCGCGCTCGCGGGGATGAACCGTCCAGTTCGTAGCGCCGCATCGTCACCACGTCGTGTTCCCCGCGCTCGCGGGGATGAACCGGTGCCAGCCTTGACCGCCTCGAGCACGTCAGGGTGTTCCCCGCGCTCGCGGGGATGAACCGCCCCGTTGCCGGGGCGGTGTGAGTTATGCGGAGTGTTCCCCGCGCTCGCGGGGATGAACCGGTCTCACCGGACATGTGGGCGCAGATCGAGCGGTGTTCCCCGCGCTCGCGGGGATGAACCGTCTTCAGCCATCTTGCGCGCCTCTCGCATGGCGTGTTCCCCGCGCTCGCGGGGATGAACCGCTCTTCCGCCTGAACCTTTCCCTTTGACATAAGTGTTCCCCGCGCTCGCGGGGATGAACCGATATGGCTCATGTCGCTGATACGACCGGCCATGTGTTCCCCGCGCTCGCGGGGATGAACCGGAACCGGCGGCCGTGTTCGCACGATCAACGCGGTGTTCCCCGCGCTCGCGGGGATGAACCGCCTTTCAATCGATGGCGGCCGCCTCAAAGGGGGTGTTCCCCGCGCTCGCGGGGATGAACCGCGGATGCCAGGCTTCTTCATCAAGCGGACGCTGTGTTCCCCGCGCTCGCGGGGATGAACCGCTGGCGCTGTATCAGAACACGGCAGCCTGAGCGTGTTCCCCGCGCTCGCGGGGATGAACCGCTTTTCTTAGAGATATGGGCGAGCGACCTGAAGTGTTCCCCGCGCTCGCGGGGATGAACCGCTGCCCGACGGCAAGCTGTCGTTTCCGTATGAGTGTTCCCCGCGCTCGCGGGGATGAACCGGCGCGCGGGTGCATGCTGCTGCTGGTCGAGATGTGTTCCCCGCGCTCGCGGGGATGAACCGCTCGGCGGGAATATCGGCAATCGCATAATCGTGTGTTCCCCGCGCTCGCGGGGATGAACCGCGAAGTGATGAAGGATGGCGAGTAGATCGGCGGTAAGTGTTCCCCGCGCTCGCGGGGATGAACCGCCGGATTGATGGACGTGGCCACCGTCGCGGCGGTGTTCCCCGCGCTCGCGGGGATGAACCGGTGGCGAATTCGAGAGGGTTAGGCGGCTGAGGGTGTTCCCCGCGCTCGCGGGGATGAACCGAACGAGGGTGCTTACCCGGATCGCATTCTGATGTGTTCCCCGCGCTCGCGGGGATGAACCGGCGCTTGGCGGAAACGTTTTCAAGGAATCCGGGTGTTCCCCGCGCTCGCGGGGATGAACCGACTGGCGAGACCCATGTATTTACCGGATCAAAGTGTTCCCCGCGCTCGCGGGGATGAACCGGCCGGGGATCGCCGCGCAGGCGTCGCGAATCGGTGTTCCCCGCGCTCGCGGGGATGAACCGACCGAAGCCAGCACCGAGGAGATGGCCCGCTTGTGTTCCCCGCGCTCGCGGGGATGAACCGGCCCCTAGGGGAATCCGATGAAAACCACCGCCGTGTTCCCCGCGCTCGCGGGGATGAACCGGACATGGTGCGGGAAAGCGTTTCTGGGTGCTGGTGTTCCCCGCGCTCGCGGGGATGAGCCGCCGCGCAGCTCCACCTGAACGAAGTCGGCGACGTGTTCCCCGCGCTCGCGGGGATGAACCGACCCCGCGACCGGCGAAACCCACATGGCCCTCGTGTTCCCCGCGCTCGCGGGGATGAACCGTTGTCTGCCGCCGTGAGCGCGGCGGCAATCTCGTGTTCCCCGCGCTCGCGGGATGAGCGTTGAACGACGCCGAAGAGGTGCACCGCGAACATCGTGTTCCCCGCGCTCGCGGGATGAACCCT

>NC_018012|2|1|480145-480783|PILER-CR
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TAGGAGGACAGGACTCGCCCTTACGCGGCGAT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TGACGGCGACGGGCGGGGCGATTGGGCCTGCT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTATGACGATGCCGTCGACGCGATCAACGCGG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	ATCCAATCTTGGTCGTCAACGCGTTCATGTCT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GTAAGAGCCTCCGTTATTCGCCGTGATATTTA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GCTATCAGTGGATGGGCGCCGGCGGCAATGTT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GCAAGGGCACCGGCGAGGTCGCCGACCAGATG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	ATTCTCGACTCGAATCGTTGCTGCTCGCGGAC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TTCCGGCCCCATCTCGCCGACAATTCGCAAGC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TGACCTGCATGATTTTCCCGTCAAAGCGCATC
GTGTTCCCCGCGCTCGCGGGGATGAACCG

>NC_018012|2|2|480145-482861|CRISPRCasFinder
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TAGGAGGACAGGACTCGCCCTTACGCGGCGAT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TGACGGCGACGGGCGGGGCGATTGGGCCTGCT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTATGACGATGCCGTCGACGCGATCAACGCGG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	ATCCAATCTTGGTCGTCAACGCGTTCATGTCT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GTAAGAGCCTCCGTTATTCGCCGTGATATTTA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GCTATCAGTGGATGGGCGCCGGCGGCAATGTT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GCAAGGGCACCGGCGAGGTCGCCGACCAGATG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	ATTCTCGACTCGAATCGTTGCTGCTCGCGGAC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TTCCGGCCCCATCTCGCCGACAATTCGCAAGC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TGACCTGCATGATTTTCCCGTCAAAGCGCATC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GTCGGCGCCGGATTCGGGCGCGTGCGTCGATG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TCTTCAGCCATCTTGCGCGCCTCTCGCATGGC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTTTCGACGGCATGGCGGACGTCTCCAACGCC
GTGTTCCCCGCGCTCGCGGGGATGAACCA	TGACCGCCGAAAAGGAAGACGCGCGCATGACC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTCGAACCCGGCATGCTTCCAGTCACCGGAGA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TCCAGTTCGTAGCGCCGCATCGTCACCACGTC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GTGCCAGCCTTGACCGCCTCGAGCACGTCAGG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CCCCGTTGCCGGGGCGGTGTGAGTTATGCGGA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GTCTCACCGGACATGTGGGCGCAGATCGAGCG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TCTTCAGCCATCTTGCGCGCCTCTCGCATGGC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTCTTCCGCCTGAACCTTTCCCTTTGACATAA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	ATATGGCTCATGTCGCTGATACGACCGGCCAT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GAACCGGCGGCCGTGTTCGCACGATCAACGCG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CCTTTCAATCGATGGCGGCCGCCTCAAAGGGG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CGGATGCCAGGCTTCTTCATCAAGCGGACGCT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTGGCGCTGTATCAGAACACGGCAGCCTGAGC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTTTTCTTAGAGATATGGGCGAGCGACCTGAA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTGCCCGACGGCAAGCTGTCGTTTCCGTATGA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GCGCGCGGGTGCATGCTGCTGCTGGTCGAGAT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTCGGCGGGAATATCGGCAATCGCATAATCGT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CGAAGTGATGAAGGATGGCGAGTAGATCGGCGGTAA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CCGGATTGATGGACGTGGCCACCGTCGCGGCG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GTGGCGAATTCGAGAGGGTTAGGCGGCTGAGG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	AACGAGGGTGCTTACCCGGATCGCATTCTGAT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GCGCTTGGCGGAAACGTTTTCAAGGAATCCGG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	ACTGGCGAGACCCATGTATTTACCGGATCAAA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GCCGGGGATCGCCGCGCAGGCGTCGCGAATCG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	ACCGAAGCCAGCACCGAGGAGATGGCCCGCTT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GCCCCTAGGGGAATCCGATGAAAACCACCGCC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GACATGGTGCGGGAAAGCGTTTCTGGGTGCTG
GTGTTCCCCGCGCTCGCGGGGATGAGCCG	CCGCGCAGCTCCACCTGAACGAAGTCGGCGAC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	ACCCCGCGACCGGCGAAACCCACATGGCCCTC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TTGTCTGCCGCCGTGAGCGCGGCGGCAATCTC
GTGTTCCCCGCGCTCGCGGGATGAGCGTT	GAACGACGCCGAAGAGGTGCACCGCGAACATC
GTGTTCCCCGCGCTCGCGGGATGAACCCT

>NC_018012|2|1|480145-482861|CRT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TAGGAGGACAGGACTCGCCCTTACGCGGCGAT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TGACGGCGACGGGCGGGGCGATTGGGCCTGCT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTATGACGATGCCGTCGACGCGATCAACGCGG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	ATCCAATCTTGGTCGTCAACGCGTTCATGTCT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GTAAGAGCCTCCGTTATTCGCCGTGATATTTA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GCTATCAGTGGATGGGCGCCGGCGGCAATGTT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GCAAGGGCACCGGCGAGGTCGCCGACCAGATG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	ATTCTCGACTCGAATCGTTGCTGCTCGCGGAC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TTCCGGCCCCATCTCGCCGACAATTCGCAAGC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TGACCTGCATGATTTTCCCGTCAAAGCGCATC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GTCGGCGCCGGATTCGGGCGCGTGCGTCGATG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TCTTCAGCCATCTTGCGCGCCTCTCGCATGGC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTTTCGACGGCATGGCGGACGTCTCCAACGCC
GTGTTCCCCGCGCTCGCGGGGATGAACCA	TGACCGCCGAAAAGGAAGACGCGCGCATGACC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTCGAACCCGGCATGCTTCCAGTCACCGGAGA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TCCAGTTCGTAGCGCCGCATCGTCACCACGTC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GTGCCAGCCTTGACCGCCTCGAGCACGTCAGG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CCCCGTTGCCGGGGCGGTGTGAGTTATGCGGA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GTCTCACCGGACATGTGGGCGCAGATCGAGCG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TCTTCAGCCATCTTGCGCGCCTCTCGCATGGC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTCTTCCGCCTGAACCTTTCCCTTTGACATAA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	ATATGGCTCATGTCGCTGATACGACCGGCCAT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GAACCGGCGGCCGTGTTCGCACGATCAACGCG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CCTTTCAATCGATGGCGGCCGCCTCAAAGGGG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CGGATGCCAGGCTTCTTCATCAAGCGGACGCT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTGGCGCTGTATCAGAACACGGCAGCCTGAGC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTTTTCTTAGAGATATGGGCGAGCGACCTGAA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTGCCCGACGGCAAGCTGTCGTTTCCGTATGA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GCGCGCGGGTGCATGCTGCTGCTGGTCGAGAT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CTCGGCGGGAATATCGGCAATCGCATAATCGT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CGAAGTGATGAAGGATGGCGAGTAGATCGGCGGTAA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	CCGGATTGATGGACGTGGCCACCGTCGCGGCG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GTGGCGAATTCGAGAGGGTTAGGCGGCTGAGG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	AACGAGGGTGCTTACCCGGATCGCATTCTGAT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GCGCTTGGCGGAAACGTTTTCAAGGAATCCGG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	ACTGGCGAGACCCATGTATTTACCGGATCAAA
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GCCGGGGATCGCCGCGCAGGCGTCGCGAATCG
GTGTTCCCCGCGCTCGCGGGGATGAACCG	ACCGAAGCCAGCACCGAGGAGATGGCCCGCTT
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GCCCCTAGGGGAATCCGATGAAAACCACCGCC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	GACATGGTGCGGGAAAGCGTTTCTGGGTGCTG
GTGTTCCCCGCGCTCGCGGGGATGAGCCG	CCGCGCAGCTCCACCTGAACGAAGTCGGCGAC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	ACCCCGCGACCGGCGAAACCCACATGGCCCTC
GTGTTCCCCGCGCTCGCGGGGATGAACCG	TTGTCTGCCGCCGTGAGCGCGGCGGCAATCTC
GTGTTCCCCGCGCTCGCGGGATGAGCGTT	GAACGACGCCGAAGAGGTGCACCGCGAACATC
GTGTTCCCCGCGCTCGCGGGATGAACCCT

Protein	Signature genes	Signature genes Name	Protein_function
NC_018012.1\|WP_014777036.1\|489954_490698_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224050
NC_018012.1\|WP_014777026.1\|478853_479771_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NC_018012.1\|WP_014777028.1\|482880_483717_-\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	unknown	unknown	gnl\|CDD\|234673
NC_018012.1\|WP_014777021.1\|474235_475333_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NC_018012.1\|WP_014777035.1\|489650_489914_+\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|178943
NC_018012.1\|WP_014777038.1\|492318_493137_-\|IS982-family-transposase	unknown	unknown	gnl\|CDD\|372648
NC_018012.1\|WP_014777031.1\|484696_485680_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NC_018012.1\|WP_041446779.1\|476162_476900_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|215025
NC_018012.1\|WP_014777033.1\|486173_487709_-\|murein-biosynthesis-integral-membrane-protein-MurJ	unknown	unknown	gnl\|CDD\|240528
NC_018012.1\|WP_014777029.1\|483922_484297_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NC_018012.1\|WP_014777032.1\|485742_486087_-\|PilZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|377796
NC_018012.1\|WP_014777019.1\|472083_473637_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|187860
NC_018012.1\|WP_014777024.1\|478163_478391_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014777014.1\|487852_488908_-\|transposase	unknown	unknown	gnl\|CDD\|376573
NC_018012.1\|WP_157174557.1\|473651_474209_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NC_018012.1\|WP_041447231.1\|478380_478818_+\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350259
NC_018012.1\|WP_014777027.1\|479751_480051_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NC_018012.1\|WP_014777018.1\|469346_472100_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NC_018012.1\|WP_041447235.1\|490742_492194_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|270325
NC_018012.1\|WP_014777022.1\|475329_476136_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776

Protein	Function_ID	Function_description	E-value
NC_018012.1\|WP_014777036.1\|489954_490698_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224050	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].	2.06525e-92
NC_018012.1\|WP_014777026.1\|478853_479771_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.68001e-148
NC_018012.1\|WP_041447235.1\|490742_492194_+\|ABC-transporter-permease-subunit	gnl\|CDD\|270325	cd13607, PBP2_AfProX_like, Substrate-binding protein ProX of ABC-type osmoregulatory transporter from Archaeoglobus fulgidus and its related proteins; the type 2 periplasmic-binding protein fold. This subfamily includes the periplasmic substrate-binding protein ProX from the hyperthermophilic archaeon Archaeoglobus fulgidus and its related proteins. AfProX is involved in uptake of compatible solutes such as the trimethylammonium compound glycine betaine and the dimethylammonium compound proline betaine, but the relative substrate preference is not known. To counteract the efflux of water, many microorganisms accumulate the compatible solutes for a sustained adjustment to high osmolarity surroundings. AfProX belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	5.00983e-117
NC_018012.1\|WP_014777021.1\|474235_475333_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	4.30053e-121
NC_018012.1\|WP_014777035.1\|489650_489914_+\|30S-ribosomal-protein-S20	gnl\|CDD\|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	7.38071e-25
NC_018012.1\|WP_014777038.1\|492318_493137_-\|IS982-family-transposase	gnl\|CDD\|372648	pfam13612, DDE_Tnp_1_3, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contains three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.6822e-16
NC_018012.1\|WP_014777031.1\|484696_485680_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.4426e-45
NC_018012.1\|WP_041446779.1\|476162_476900_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	4.67218e-45
NC_018012.1\|WP_014777033.1\|486173_487709_-\|murein-biosynthesis-integral-membrane-protein-MurJ	gnl\|CDD\|240528	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli MurJ (MviN) has been identified as essential for murein biosynthesis. It has been suggested that MurJ functions as the peptidoglycan lipid II flippase which is involved in translocation of lipid-anchored peptidoglycan precursors across the cytoplasmic membrane, though results obtained in Bacillus subtilis seem to indicate that its MurJ homologs are not essential for growth. Some MviN family members (e.g. in Mycobacterium tuberculosis) possess an extended C-terminal region that contains an intracellular pseudo-kinase domain and an extracellular domain resembling carbohydrate-binding proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	6.08297e-157
NC_018012.1\|WP_157174557.1\|473651_474209_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	1.67433e-16
NC_018012.1\|WP_014777032.1\|485742_486087_-\|PilZ-domain-containing-protein	gnl\|CDD\|377796	pfam07238, PilZ, PilZ domain. PilZ is a c-di-GMP binding domain which is found C terminal to pfam07317. Proteins which contain PilZ are known to interact with the flagellar switch-complex proteins FliG and FliM. This interaction results in a reduction of torque generation and induces CCW motor bias. This domain forms a beta barrel structure.	1.22087e-08
NC_018012.1\|WP_014777019.1\|472083_473637_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	1.36212e-116
NC_018012.1\|WP_014777028.1\|482880_483717_-\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	gnl\|CDD\|234673	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase.	2.27351e-157
NC_018012.1\|WP_014777014.1\|487852_488908_-\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	0.000870813
NC_018012.1\|WP_014777029.1\|483922_484297_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	5.53532e-73
NC_018012.1\|WP_041447231.1\|478380_478818_+\|PIN-domain-containing-protein	gnl\|CDD\|350259	cd18692, PIN_VapC-like, uncharacterized subfamily of the VapC-like nuclease family of the PIN domain superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.46324e-54
NC_018012.1\|WP_014777027.1\|479751_480051_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.12852e-58
NC_018012.1\|WP_014777018.1\|469346_472100_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	6.41365e-132
NC_018012.1\|WP_014777022.1\|475329_476136_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	9.86889e-37

>NC_018012.1|WP_014777027.1|479751_480051_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MLVIVTENVPPRLRGRLAVWLLEIRAGVYLGNPSKRLREFIWGQVLEGVEEGNAVMAWNTNTESGYDFLTVGKNRRIPVDFDGLRLVSFLPPDEPEKAL
>NC_018012.1|WP_014777026.1|478853_479771_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MLPPLKPIAMKERISMIFIEYGEIDVLDGAFVVIDKTGVRTHIPIGSIACIMLEPGTRVSHRAAALAARVGTLLVWVGEAGVRLYASGQPGGARSDRLLYQAKLALDDQARLKVVRKMYELRFGEAPPERRSVEQLRGIEGARVKKTYDNLAKRHGVQWHGRRYDATDWDSSDLPNTCLSAATACLYGITEAAVLAAGYAPAVGFIHTGKPQSFVYDIADIVKFETVVPVAFKIAARNPPQSQAERQVRLACRDVFRETKLLGKIIPMIEEVLSAGGLEPPKPPKESVAPAIKDTENLGDAGHRH
>NC_018012.1|WP_041447231.1|478380_478818_+|PIN-domain-containing-protein
MRDSIFVDSNLWLYAFVLRPGEEVKHARALALLEARDRYTISTQVVSEVSVNLLRKAGMEENSLLDIVEGFYRRCRVVSTDLECHRTASRLRSAHQFSFWDSLIVAAALEADCLMLYSEDMQHGQVIDHKLTILNPLLEAATSAG
>NC_018012.1|WP_014777024.1|478163_478391_+|hypothetical-protein
MQAIEFESVVQGQAIPLPSTAALSPGQPVRVVVMYEPTPDVDQPAPDDDAILRLARHPLVMAGFVPLSRDDAHAR
>NC_018012.1|WP_041446779.1|476162_476900_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MTPRPGLDFSDLVALGGLDPYGQHQLVWKFFDLPREPTPTQVPFLFRAEVRDGLPLLYVLSSDEPRDTSGKWRIESKDYRPALTLGDRLAFKLRANPTVARPGDVVLGRDGAPKLRTSGLKTGQPRHRIKRHDVVMDAKQRMDWKALPPDERPSLAHLAYEACAGWLREREERLGCQFNPARLRVDGYRTHRMHRKRGIALSTVDFEGELQVTDLERFTPILFNGIGPAKAFGCGLLLVRRMTDH
>NC_018012.1|WP_014777022.1|475329_476136_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MREYLVFQLYGPLSAWGDIAVGETRPADLAPSKSAVLGLIAAALGLRRPDTTADESQRRQWEAEHLALAEGYGMAAKITLPGLPLTDYHTAQVPSSGSGRNRKVFATRRDELTWMPRHELNTILSRRDYRQDAYAGIALWAREGAPYPLQTLHDRLLAPEFVLYLGRKSCPLALPLNPGIRTADGIEAALDGYGLAQAVKGVIDDRDLSAIKRHLDESKPILCWDSDAETSLEKELTVSRRDLPTSRRRWQFAVREECRAHHTTGAAT
>NC_018012.1|WP_014777021.1|474235_475333_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSNFLQLHLLTSYPPACLNRDDLNRPKSAIMGGVPRLRISSQSLKRAWRASEQFEDALTGHLGTRTKLKGVKIFEKLVAAGIKEKAARECAQAIAKQFGKLKSKKDNKPLNDLEIEQLAHFSPEEEGAIDALAEVLISEGRAPTEPELALLRKQHTAADIALFGRMLADNPSFNTEAACQVAHAITVHRAAVEDDFFTAVDDLNDHEEDAGSAHMGEQGFGAGLFYQYVCIDCDRLRENLGGDPDLASRTIQALIEAAATVAPTGKQNSFASRACAYYVLAEKGSRQPRSLSLAFMKPVSEGDMLDSAVNALTSMRDNIDKVYYQNSENSENKQYSLPSRSINALSGEGDFTKLKKWAAGVGDDA
>NC_018012.1|WP_157174557.1|473651_474209_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MAVTDWGEYPFPQGKPDHPSFGLLIAWWRRLEDDKGERAFLRRAGTLTEVMLSPSFVDLLRTLRNQGYAVSNHNHPLSRIAAIAGLSARIKAPADAGLATRMGTPKAAGSTPTVSQLRLRRILACDDIEELYTLLRRALAVLDDKADLADLAATVWNWSPLDDKRPYDPRRRLAYDYYAAAPIKS
>NC_018012.1|WP_014777019.1|472083_473637_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNLISECWIPVRRADGSRQRIAPWQLTDAIDDNPILAVASPRPDFDGALTQFLIGLLQTTCTPDLFTWRTWRKTPPTPAELKTRFETVAYAFELEGEKAFMQDFSPTELDKQFAISALLIGSPPEDSETDLFIKQETVKQLCPHCAATALFSLQTDSPEGGRGYRTGLRGGGPLTTLVLGKHLWDTGWLNVLEKSRYVFGASDSDLLSQDRFPWLKPTRTSEAQPPAGVTTPVDVHPDQQFWALPRRIRLLPKETEPTACDLCGRETQMIYRNFTAKNYGVNYSGFQHSLSPHYVKDGALMPAHPQPGGIGYRHWLGLVESDADGVHRPARVVEQFRSLTRMDGDLWAFGYDMKSNKARCWYDARMPILLISKDMEAVFRDLVTRLVNTADKVAGDLRNSLKTALFGETKVRGDLSFVQSAFWAETEAAFYDHLRQLRDLLPTDQQAHPILESWLKTLRAAAFLLFDRHSQTGDFDAVDPGQIARARNGLGKALAGAPLKEKILGLPKPLKPKRQKS
>NC_018012.1|WP_014777018.1|469346_472100_+|CRISPR-associated-helicase/endonuclease-Cas3
MEFTAQYFRYWGKADSAGEGGVQWHPLAYHCLDVAACGQVLLRHQSAWLEKIAVLSGLDPAALSQWLIFLLSMHDIGKFGDGFQALRPDLPGELQGQAARVAYDVRHDTLGYALGMESLPGWLGHDASDDLESDLLRPWLAAVAGHHGRPPKNLPTQAILKRQFRPAVLADVRQFVDDARKLLFPIGWCLPEPAPGGAERQQQASWLVAGFAVVSDWLGSNTRWFNYQHPERSLEDYWQTVALPTAEQAVYESGLLGPSPAKQATFAGLFPHLASALTPLQTWANSVTIAPGPQLFILEELTGGGKTEAGLTLAARLMSEGRGFGLYFALPTMATADAMFDRLRKRHAGHDQETWQGFFSTGESSLVLAHSAAATKTKLDALRRRDAGYDPQHEEPSASQHSTAWLADSRKKALLADFGVGTVDQALLGVLPLRHQSLRLLGLSTKILVVDEVHACDCYMGELLARLLRFHAGLGGSAILLSATLPIDQRARLLAAFADGAGYPTTKPEESAYPLATHLHSTDLDETPLQAREAVSRPVAIDSLADEAAVFQRLESTIQRGGCAVWGRNTVADAMGAWQTWNANHPDSPAILFHARFALGDRLDIAETIKHRFGPDSTAETRGGRLVIATQVVEQSLDVDFDDMVTDLAPIDLVVQRAGRLQRHTREATGNLAPTEGRGGARLGVLMPEPTPDAAADWFKGFLSKAARVYPDHGKLWLTARWLVEHGGFDLAAQARDLIESVYGDTGYDRTPAPLQKITDDAEGACHADRGTARGNLLSFEQGYDPTGLHWPDEDEHADITTRLGEKTVRLRLAKIVEDELIAWAAADPGIAWSLSELTVARRLVAGESPREATRIERARQSMPDEGRYCLIVPLEQSGAEWRGWAVNQQDEEIRVIYSPTAGLRIETGDVIDESDL
>NC_018012.1|WP_014777028.1|482880_483717_-|symmetrical-bis(5'-nucleosyl)-tetraphosphatase
MPTYAIGDLQGCYLELRALLDRLAFDPQVDRLWFVGDLVNRGPDSLKVLRFVHDLGEAALVVLGNHDLHLLALAAGNSRHAKKSTLEAVLRAPDRDELLHWLRHRPLLHHDPERNFTLIHAGLPPQWDLAEAQVRAGELEAVLRGTDYQDFLRDLYGNQPDRWSPDLTGLKRLRFITNCLTRLRFCKPDGTLALTEKGSLENHTVGLVPWFRAAGRKTRSDRIIFGHWSTLGYRQEDNVWAIDSGCLWGGALTAIRLDATSLIPIQLNCKGYLAPGQD
>NC_018012.1|WP_014777029.1|483922_484297_-|Co2+/Mg2+-efflux-protein-ApaG
MKEFSIKIVTQSQYQPDQSSPSEGRYVFTYTITIENQGDEPARLLDRHWIITDADGQAQEVRGQGVVGEQPHLRPGERYQYTSGTVLSTPLGSMHGSYGMVDDDGIRFEARIPAFSLISTTSIH
>NC_018012.1|WP_014777031.1|484696_485680_+|Gfo/Idh/MocA-family-oxidoreductase
MSDPLLSDRIRIAVVGVGYLGRFHALIYSRLSGVDLVGVFDTDRARARSVAAEAGCASVERIEDLFGRVDAVSVVVPTTAHLDAAAPFLSRGIHVLLEKPIAPTLADGAEIVRLAGAHGATLQIGHVERFNAGVMALAQRIRSPLYIEAQRMGGFVERATDVDVVSDLMIHDIDIILSLVDAEIGSISAVGASVLTEHVDIANARLEFANGTVANVVASRVSEKTTRRIRVFQPRRYLSLDFVEQTIDIAEPRPVDGAIRPEIARQRIQVEPIKPLDLELAEFVRCIREGQPPLVDGRIGLKALEVALEVRARIAQSSETAGREAGR
>NC_018012.1|WP_014777032.1|485742_486087_-|PilZ-domain-containing-protein
MQTTGFDNRRQHPRAPLGCEVQLQPINSQLAGTAGCSYDSVSCDISAGGMRIWSDRPYPTKTRLLLAFECDAQGWSGVTSCVGSVVWIDPHPAEGRCLLGIKFGDAEDVDKETA
>NC_018012.1|WP_014777033.1|486173_487709_-|murein-biosynthesis-integral-membrane-protein-MurJ
MASLAASLAKVGGNTLLSRILGFARDLVVAHAFGADAGTDAFFVAFKIPNFMRRLFAEGAFSMAFVPVLNAYRETHGFPALKHFVDDIAGTFGAVLLLITALGVLGAPVLILIFAPGFAHDVAQWELATAMLRLTFPYVLFISLTALAGGILNTYERFGIPAFTPVLLNLSLIGCTIVLAPRMEQPIMALAWGVLFAGMIQLAFQLPFLAQLDLLPRPRLTRKDPGIGQVIRRMGPALFGVSVAQISLLLDTLLASFLTTGSISWLYYSDRLMEFPLGILAATLGTVILPRLSRRHAANDPESFSETLNWALRWILLLGVPAAVGLLVLAGPLMATLFHSGEFNADDVAMASHSLMAYSLGLIGFMGIKVLAPGYYARQEMKIPARIAAIALLVGLGCNLILMIPLGHAGLALGTTIAAMLNAGLLLRGLLKDGILRPQAGWIVLLARGLTASLIMGCVIHLGADDTARWIAMDSGERIRHLLTWIALGGFVYLAALLALGIRPRHLRART
>NC_018012.1|WP_014777014.1|487852_488908_-|transposase
MGSVKRLADEVACGLREVHPRLRKTVVSKLALAVGAMIEGQTPNTVELANLLPLDTERQDMREQWLRRLLKNPRLGPGMVIEPFARAELAKAASHGQTVLLSLDQTDLGDRMALLMVALRVGDRAIPLAWRAEEGAANLGFAGQQVVLEPLLAWLPSGARVLLSADRFYPSAGLFGWLQARGWSDRLRLKSNVLTDTGQGDETTTGALAHGVTERYFTGVRLFAQGVITNLGILHEDGHPEPWIIAMDAAPTRASVLDDAARWAIEPMFSDVKGRGFDLEDSQLQHAERLERLVLIMALAMYWCVRAGRDEGLNDPTPLEKKSRRRTTPRIGASGNSIVAWSRGSRAACAV
>NC_018012.1|WP_014777035.1|489650_489914_+|30S-ribosomal-protein-S20
MANSVQARKRARQAEVHRQRNAAQRSTLRTFIKKVIKAIRSEDKEAATQAYKDAVPRIDRAARKGLIHANKAARHKSRLNAHIKAMA
>NC_018012.1|WP_014777036.1|489954_490698_+|ATP-binding-cassette-domain-containing-protein
MFALDQVCKRYGQATALDGITLTFERGRTTALIGPSGCGKSTLLRLLIGLLTPDAGSVRFDAQPLEAASLRRLRQRMGYVIQQGGLFPHLTARQNVTLMARHLGWSQARIAPRLADLTALTHFPADGLDRFPSELSGGQNQRVALMRALMLDPEALLLDEPLGALDPMIRYELQEELKQIFATLGKTVVLVTHDLAEAAFLAHAIVLMRAGRVVQAGCLTDLMTAPAEPFVEQFIRAQRSHLTEGVF
>NC_018012.1|WP_041447235.1|490742_492194_+|ABC-transporter-permease-subunit
MPLLAGCGRTGDEVVIGSKKFTESVVLGEVLKDLVADSGMPVRHRRALGGTRILFNALANGEIDAYVEYTGTLTHEILARAEPQDEAALVARLALDGIHMAGSIGFQNNFALGIPESRAAALGIANISDLKGQPDLRLRFGSEFMDRDDGWPGLRDVYGLPQRDVRGVEHELAYRALGAGDADVTEVYTTDAEIAAYDLRTLVDDQGYFPRYDAVLLYRADLEQRSPLAVAALRRSLGLIDAERMIALNAAVKIDGRAEAEVAADWLRTRFDLAAAAPTEGRAARLLRYTLEHAMLVGVSLLAAVVVAVPLGILAAYRRRLGQSLLALVGILQTIPALALLVVMIPFLGIGAGPALVALFLYSLLPIVRNTHAGLVGIPATLRESADALGLSAGARLWRIELPLALPTLLAGIKTAAVINIGAATLGALIGAGGYGQPILAGIRLDDTGLILEGAIPSALFALAAQWLFERAERAVVPRGIRS
>NC_018012.1|WP_014777038.1|492318_493137_-|IS982-family-transposase
MDTQIIFVYCFCDDLLKALGHREDPQCQVSDAEILTTALVAALEFGGCFKRAHRFLHETGYLPHRLSASRFVRRLHRCEPFVMPLFHVLASLGHQLNTERLYIVDSFPLPVCDNIRIRRCRRYQGEAWRGYQASKHRYFYGVKIHLMVTAQGQPIEFFLTPGADSDAKALKQYAFDLPAQATITGDKAYNDYGYEDLLKEAGLHLLPLRKKNSKRPHEPALTYLMSSARHAVETTGSLIERLLPKHIHSVTAAGFELKTAFFILACSLNFLF

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Crispr_ID: NC_018012_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018012_3

904322-904435

Orphan

Consensus_repeat	Method
GTACTTTCTCCGTAAACGACGTAGTCTCCATTGCTACCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018012_3

>merge|NC_018012|3|904322-904435|CRISPRCasFinder
GTACTTTCTCCGTAAACGACGTAGTCTCCATTGCTACCCGATGGCGGCGATGGTTTCCGGCGGAAGCATCTGATGGTACTTTCTCCGTAAACGACGTAGTCTCCATTGCTACCC

>NC_018012|3|3|904322-904435|CRISPRCasFinder
GTACTTTCTCCGTAAACGACGTAGTCTCCATTGCTACCC	GATGGCGGCGATGGTTTCCGGCGGAAGCATCTGATG
GTACTTTCTCCGTAAACGACGTAGTCTCCATTGCTACCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_018012.1\|WP_014777367.1\|909284_910712_-\|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl\|CDD\|182626
NC_018012.1\|WP_052314953.1\|897071_899885_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373317
NC_018012.1\|WP_014777364.1\|907339_907771_-\|thioredoxin-TrxC	unknown	unknown	gnl\|CDD\|182889
NC_018012.1\|WP_014777362.1\|902797_903229_-\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NC_018012.1\|WP_014777357.1\|889358_889583_-\|DUF2281-domain-containing-protein	unknown	unknown	gnl\|CDD\|378366
NC_018012.1\|WP_041446819.1\|901238_901499_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224029
NC_018012.1\|WP_041447278.1\|911116_912076_-\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha	unknown	unknown	gnl\|CDD\|235580
NC_018012.1\|WP_157174571.1\|889679_891167_-\|type-IV-secretion-system-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|223510
NC_018012.1\|WP_041446821.1\|910783_911065_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014777369.1\|912143_913001_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NC_018012.1\|WP_169315560.1\|904722_904902_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_083845698.1\|903311_904286_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|224029
NC_018012.1\|WP_014777360.1\|896039_896657_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NC_018012.1\|WP_041446820.1\|908893_909331_+\|DUF29-domain-containing-protein	unknown	unknown	gnl\|CDD\|366774
NC_018012.1\|WP_157174358.1\|904921_907081_-\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
NC_018012.1\|WP_014777356.1\|889117_889318_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014777365.1\|907906_908770_+\|thioredoxin	unknown	unknown	gnl\|CDD\|225660
NC_018012.1\|WP_014777361.1\|899881_900781_-\|DUF4007-family-protein	unknown	unknown	gnl\|CDD\|372513
NC_018012.1\|WP_014777370.1\|913134_913887_-\|metal-dependent-hydrolase	unknown	unknown	unknown
NC_018012.1\|WP_157174357.1\|893706_896001_-\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|223989

Protein	Function_ID	Function_description	E-value
NC_018012.1\|WP_014777367.1\|909284_910712_-\|tRNA-lysidine(34)-synthetase-TilS	gnl\|CDD\|182626	PRK10660, tilS, tRNA(Ile)-lysidine synthetase; Provisional.	5.21547e-113
NC_018012.1\|WP_052314953.1\|897071_899885_-\|hypothetical-protein	gnl\|CDD\|373317	pfam14820, SPRR2, Small proline-rich 2. This family of small proteins is rich in proline, cysteine and glutamate. They contain a tandemly repeated nonamer, PKCPEPCPP. They are components of the cornified envelope of keratinocytes.	0.00525471
NC_018012.1\|WP_014777364.1\|907339_907771_-\|thioredoxin-TrxC	gnl\|CDD\|182889	PRK10996, PRK10996, thioredoxin 2; Provisional.	1.08339e-46
NC_018012.1\|WP_014777362.1\|902797_903229_-\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	3.81022e-42
NC_018012.1\|WP_014777357.1\|889358_889583_-\|DUF2281-domain-containing-protein	gnl\|CDD\|378366	pfam10047, DUF2281, Protein of unknown function (DUF2281). Members of this family of hypothetical bacterial proteins have no known function.	8.18183e-09
NC_018012.1\|WP_041446819.1\|901238_901499_-\|hypothetical-protein	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	4.33085e-20
NC_018012.1\|WP_041447278.1\|911116_912076_-\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha	gnl\|CDD\|235580	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated.	0
NC_018012.1\|WP_157174571.1\|889679_891167_-\|type-IV-secretion-system-DNA-binding-domain-containing-protein	gnl\|CDD\|223510	COG0433, COG0433, HerA helicase [Replication, recombination, and repair].	4.4063e-14
NC_018012.1\|WP_014777369.1\|912143_913001_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	9.52376e-23
NC_018012.1\|WP_083845698.1\|903311_904286_-\|cysteine-desulfurase	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	5.68078e-127
NC_018012.1\|WP_014777360.1\|896039_896657_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.17176e-18
NC_018012.1\|WP_041446820.1\|908893_909331_+\|DUF29-domain-containing-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	2.46137e-64
NC_018012.1\|WP_157174358.1\|904921_907081_-\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	0.00109178
NC_018012.1\|WP_014777365.1\|907906_908770_+\|thioredoxin	gnl\|CDD\|225660	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones].	1.4421e-85
NC_018012.1\|WP_014777361.1\|899881_900781_-\|DUF4007-family-protein	gnl\|CDD\|372513	pfam13182, DUF4007, Protein of unknown function (DUF4007). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 284 and 326 amino acids in length. This domain is found associated with pfam01507 in some proteins, suggesting a functional link.	6.18379e-111
NC_018012.1\|WP_157174357.1\|893706_896001_-\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	2.78073e-74

>NC_018012.1|WP_083845698.1|903311_904286_-|cysteine-desulfurase
MPSIFHAGGVALNVPPNPLYFDTAASTPIAPEVLARMVEYLQGVDANPSSTAHRPGQAAAAVVSAARAEIAAELGCEPDEVIFTSGATEANNLALQGVARAHADQGRHLITSAIEHKSVLACCAALECDGFEITRLPPNRAGWIEPETVRQVVRPDTLLISIQHINNETGVLQPIEEIAALASEVGVLLHVDAAQSAGKFAIDLDKTPIDLLALSAHKFHGPKGIGCLIVRNRRQLRLQPLMYGGGQEFGLRPGTLPTHQIIGLSRALTLAARRRQTDLTWVAELKRQFLEQLAAHLTYRVHGDPARSSPYIVNKMRNPPALPG
>NC_018012.1|WP_014777362.1|902797_903229_-|IS200/IS605-family-transposase
MDAFESLSHSKWECKYPVVFIPKCRRRVLYGQLRTHLGEVFHKLARQRESVIEEGHLMADHVHMLIAIPPKYAVSQVVGYIKGKSAIHLARVYGERQRNFRGQHFWARGYFVSTVGRDEATIRAYIQHQEREDKRLDQLNLWD
>NC_018012.1|WP_041446819.1|901238_901499_-|hypothetical-protein
MVTLSIDGIGSDALINQLAPDLAIASGSACASGTVESSSVLRAMGVNGAALNGAVRVSFSRHQTDDEVSAVVNRMVAAVQRMRALA
>NC_018012.1|WP_014777361.1|899881_900781_-|DUF4007-family-protein
MKLNRDKTAFGRHETFPLRYGWLTKGFETIQKTPDLFTRPEQAMVDLGVGRNMANAIQYWLQVTGIVEFADGIGTPTELGEVLLGETGDRYLEDEATLWIIHWLIASNPEMATGFFWFFDRFAMPRFQEQEALQALSEFVAKELKARRSHSTLKSDISTLLRMYAPQVERGDDHLDSPLAHLQLIEVDAGRQYRSPRLLRAFLPPVALHFALAQRFRADPDQPALPIRSLLQGGDQWAAPGAIFRLSEEGLMHSLGQLMELYPQSYELRDTAGVHQLYRPDVLADPLDLLRAHYGSQTA
>NC_018012.1|WP_052314953.1|897071_899885_-|hypothetical-protein
MTTLDQRIRIQGAYTRSINLPRDCDRLELIQAYLPTSRALQALAQILDGLEQETGGRAQALIGPYGTGKSAFGLFLSALVNTEQTPTHQAALAILRTHSPPLADRFQHALKGARGFLTIQINGIPDSLTRQFLLALGAAAQKRSLGSLLIKEIFDAAEPGHPMDRVLTLIRRVQRVWSQQGGDGLLIEIDELGKFLEYESYHPQHREIHLLQLLAEQAQEPSAAPLHLVVMLHQAFEHYSHRLSKTLREEWQKIQGRFGAIAFLEPAEQALRIVAAAFAREGDLTADLTDQLASATATLDAEGALPLGLEPAQARRLFARCYPLHPLTLLILPVLCQKVAQNERTLFSYLGSREPFGLTERLGTLSMGDWIEPWELYDYFILNQTAGFSDPLTAHRWVEVITALERFDATPDDAAVKLLKTLGLLNLIGAQRGLKASPPLLANLFGDALDSLLARLEAASIIQFRHYSQEYRVWAGSDFDLRGALQEAIAEQINLPLVDILNRIAPFKPIVARRSTILTGALRSFLPTFIARDRWPPTAEEGGELRLWFYLAEEHEDAPLDDMPARAVVARCGFTDSLREAVVEWMALQELPKRHAALHQDPVAQREHRAWLAHAERETAQLIRTLLDAPETLTWFWGGDERPVRDRRDLQRQLSQWVDTRCYPQAPRLRNELINRDQPSASANTGRKRLLAAMLNAADQPDLGIAKTPAEKSLYLSVLKESGLHREVDGRFGFHPPPASDPCRLRPLWQAITDMLGESGGAHVALTALHDRLQRPPYGAKLGPLPVLIVAYLLASRREVALYQEGVFCDALTIEQVELLCRRPALFALERFAITGLRGELFDRYIRSVVGQVRPDATLLARLCALSPICPTTACIAPDSARSPSACAPPSGRPAAPASYCSTPCPPPAASQRKPSPLTIPRSPSASSRPWSRRSTS
>NC_018012.1|WP_014777360.1|896039_896657_+|class-I-SAM-dependent-methyltransferase
MTANPDPTRQFYEVNAETFVTETRAIDMHSLYAPFLARIPADGHILDAGCGSGRDSRAFLDLGFRVTAFDASPRMVHLASLELGQSVHCLSFQALDWRCEFDAIWACASLLHVKMTELPDVLRRMARALRAGGVLYASFKYGQGERFHHGRHFSDFNAASLKSLLHDTGVLAPIEIWITHDRRPGRSDEQWLNVLLSPGVLSHQD
>NC_018012.1|WP_157174357.1|893706_896001_-|DEAD/DEAH-box-helicase-family-protein
MGMNLQNDRSAQSSGAEDLFVDLFAQVFGFEKTQLLVPEYPVRDLLGNSRFIDFAIKSAARKIAFEIDGPSHYGGMEFSVLTYEDDLLRQNSLIHDEWQVYRWTDRQLAHEPDAVKEQLAFFLAGIPGLLSLDDFLPKQSGAASSLDLRTHQQEALDWLATIRVQGHTLALLDHATGSGKTFAAIRDAQRFGPRVLYVAHTRDLIEQTAAEFRAHWPEVTHGRLLGGIEETDCDVLCATIQSISRRLSDFAPDAFRYLIIDEAHHAAAESYRTLLGYFQPSFTLGLTATPERPDGKPILELFRDAAHRLSLQEAIQRGELVPIRCVRVKTNVDLSRVRFNEVQYNRRDLEQTLLVPARDQLIVDTYLEHVKGRKGVAFCVNVRHGEELAALFRQHGVAARAVSGVMPNAEREKVLKQYALGQLRMLCACDILNEGWDCPDVEVLLMARPTLSRIIYMQQLGRGTRKSPGKESLLVFDFVDNPGRYNASFNIHRLTGTKHYRKGGLVVAPDADLERERALFERGEAPPIVLNLGLWAEDYEEVDLFNWQTAARDMLTVSELESRLGVAETFFWRKVQTGELQPDHRLEIGQRTYSYFRKDRLDEIRQQFGIEPVTADTIHKRFMDFCEDMDMNASYKPVFLRALFASVDAEGTADIESLSRSFRDFYAARSADGQFVERAKMRMSRIQDLSDADVQLLMLQKPFRQFAQRGYLSYGRDVARVRFDKRLWRCLSDDDRRRLGDIADANIWSYYTKHDPDAGGTPSS
>NC_018012.1|WP_157174571.1|889679_891167_-|type-IV-secretion-system-DNA-binding-domain-containing-protein
MALPAGVVAEPLRVPEGFAIWHVALGHDGLVSVFDETKAPAALVLDETAIHVRPGGVNGPEIIDRIEPEPVDPSPSPDPGKMDPVPPVVVPLPVIEPPPTPIVVLPPVVDPTPIVVPPVPTVPEKLLIGTRANGDPVYWHYGHPNLPNRHLLIFGASGSGKTYGIQCLLAEMAAQRLHSLILDYTDGFLPKQIEARFDVVAKPKNHFVVTDKLPLNPFRQQEYTIDPSIPRIKESPYQVASRVASIFISVYESIGDQQKAALMRVLEEGIAEDVQFTFDKLLSRLREDSQYGESLASKLEPLIKSQPFREGAESAWEGMLSATDHWVDVLQLKGLGRDVQKLVTEFALWDLYDFACNNGSKNRPIPVVLDEIQNLDHSSDSPIDKMLSEGRKFGLSLLLATQTTSQFDQEGRDRLFQAGHKLFFKPADTEVDRFATLLSQSTGESKAEWRQRLTALQKGQCWSLGPVLTSAGKLQEKPILVSVTPLEQRQLGPGV
>NC_018012.1|WP_014777357.1|889358_889583_-|DUF2281-domain-containing-protein
MTIAERIYEIVKKMPEDQAAEVLDFVEFLQAKRATPPPRMPAEQARILRAEWQALVASQPLQTESAEDMANRGV
>NC_018012.1|WP_014777356.1|889117_889318_-|hypothetical-protein
MPIDFDQDKLQDRPIDDDLLGQRPIGLAKGMFEVPASFFEPLPDDLLDAVRGVSPFWAIVERKMKQ
>NC_018012.1|WP_169315560.1|904722_904902_-|hypothetical-protein
MKRDLARLAGVFFFGLKTFVLSLSSFPEAVRGEALALPEAVRGEALALPEAVRGEALEP
>NC_018012.1|WP_157174358.1|904921_907081_-|peptidoglycan-binding-protein
MTRKRYFDGCVGVAVCLLATAGAWADDPPPVPTVAPPVDERPFEDALAAYRNLSASQSRNHDRAQDITPRQMLILLEVCERTGASLGQALATGEHESAHTWNDYIRPPLRNGTLGAATGVWQFMPGTFHRIVQRFGARLLTASEAETTTGRERLDLGDGPFSDEQVRRLIQETVDGRRGANDEELQLLRHNFAVLAFAKYYLSLDSGATTPEEDYLYHFLGAGEGRRVLALARGDARDTLCVKPVEEPTPLVDTPPALVTTDAREPELIAAAILRARSLAAAEPSLQADFAPLAPSRPLPQWRFDAPLQRPEYGPSVTVRERNADPLGVPRPSIEPAIWFPVEPVEPEMPPPVSSQWGLPADSPVVTGNLGMFYRDGKGQSQPYTWAEFMEHLARRVRAKDQPALVRAKYGVGFALPGGDLPERTFDPEQTSPAAAFYHAISGDLLLPEALALGPLDPAETRQYKRRLAALLNQGEDQPLETLPPEAVSALRHLTLLPPNGPDLGATPFEVERALRAFRARVGKQEPDDPAHRNRLMPAERIALEIYEQRLARYAALQAGQQAALNDAADLNRLREMPTGWRKTAAPRIAILQTTLAEQGLLKPLTRKVVWRDKKRKKHVSHQTVPFTGFPGQATEAALDAFQWRNGLRKTQGVLDGVTLAMLGLPPMGLDLFLPPAGPQCAIDVSTETAPLCERPIQKRPGEIDALRARGARALPAWW
>NC_018012.1|WP_014777364.1|907339_907771_-|thioredoxin-TrxC
MSDDVHVVCPACDAVNRVASHRLGAGAKCGKCHGPLFTGKPLALDEARFARHLARSDLPLLVDFWAPWCGPCRMMAPAFESAAAKLEPAMRLIKINTEEAQSLSARLGIRSIPTLALFRGGAEVARQAGALDANGIVAWARRG
>NC_018012.1|WP_014777365.1|907906_908770_+|thioredoxin
MTQSAFVVTVTAQNFQSVVLDGSFERPVLVDFWADWCAPCRMLMPMLAKLAEEYGGRFLLAKVNTEEEQALAAQFGIRSLPTVQLFQSGRAVDQFMGALPESQVREFLDRHLPQASNGLLTLALDRMAVGEFAEARSLIEEARAEDPNNLRLPLAELQLAVAQGEIAKARTLLAGLPIELANDPEALALRGQLRFVDALENAPPEAELTARLTTDPKDSEARYQLAAHQVLRGDYAGALEHLLELMKRDRAFEDDAGRRGMLAVFDLLGGSGDLVARYRARMMNILY
>NC_018012.1|WP_041446820.1|908893_909331_+|DUF29-domain-containing-protein
MPMPLHESDFYTWTRRQAELLRAGQFGELDTANLIGELDSMGARERRELVNRLAVLLAHLLKWRYQPERQGNSWRRTIRIQRIEVADLLGDNPGLKPELAELCVRAYAKARILATDETRFDESTFPSEAPFTLEETLDPAFFPTE
>NC_018012.1|WP_014777367.1|909284_910712_-|tRNA-lysidine(34)-synthetase-TilS
MTPFDPGNLAALLARFQNVSRCWIGFSGGLDSSVLLSAAASVRERLPGALQAVHLDHGLHPDSATWAAHCQSQCDALVIPLTIRCLHLQPHPGESIEAVAREARYRAFSSLLGPGDLLLAAHNRDDQAETLLLALLRGSGVQGLAAMPFEMPCGPGRLIRPLLDTTRETLTAYAQTQGLDWIDDPSNRVTSLDRNYLRHRVLPVLRERWPALATTLSRSASHCAEAAELTDRLAAQTLDGLGGAHPGTLDIPGLVRIDRVLQKSVLRLWLRRRGFVVPDTRHLRRILDEILTARADANPLVAWSGCEIRRYRRDLFALPPLPAPPSPASAINWSVGEEMTTLELPSGLGRLEWHPTAKGDRLSVIKGDETGQKTLKVRFGLTGLNCRRPADSHTRSLKKLYQTLGIPVWWRPYIPLVFDGDTLIAIADVCHCRERDAGVETMGELRWRGTFREKSASLDAVTLSGKMPDPGFLPA
>NC_018012.1|WP_041446821.1|910783_911065_-|hypothetical-protein
MAISHEEILELFREVAEAQKETQRISRETKRMFQETERLFPQYAGYRLMGAVAAMVLPDEVARFAYRQSLFVLTQSGDAILIRNDDRFTPKEW
>NC_018012.1|WP_041447278.1|911116_912076_-|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha
MNLNFLDFEQPIAELEAKIEELRLVGHDNELNIQEEIERLHTKCVALTESIFSALTPWQISQLSRHPQRPYLLDYARRLFDDFHELHGDRAFADDRAIVGGLARIDGRPVMVIGHQKGRDTKEKILRNFGMPRPEGYRKALRLMEMAERFGLPILTFIDTPGAYPGVGAEERGQSEAIARNLREMSRLRTPILCTVVGEGGSGGALAIGVGDWLGMLQFSTYSVISPEGCASILWKSADKAQLAAEAMAITSDKLLEQGLVDQVIKEPLGGAHRDPDAVAKSLKAVLVERLDALTGIPPETLIAARYKRLMGYGRFKEA
>NC_018012.1|WP_014777369.1|912143_913001_-|Uma2-family-endonuclease
MSMAQPLFSDPDWPAGDPPEGMPPVPPTQDELPCDDGEPMETQRHKWQMDLLIDALDLWLQEKGEGYTNGNMFVYFSLEQTRGRHFRGPDVFVVLGVPRGERKSWVVWEQGKAPDVVIELLSRSTAASDKGEKKEIYQDRMRVPEYFWFDPFNPEDRAGFQLTDGVYQPIERDGQGRLHSPLLGLTLVLWQGDYLGIEGTWLRWATPDGVPLPTHAEAAWNAAEDARQRAETQTQLAQEQMRLAEKQRRFAQAQQVLARTERERAERAETELARLKALLEGDKPR
>NC_018012.1|WP_014777370.1|913134_913887_-|metal-dependent-hydrolase
MANFQTHLNVCIVVSAAVTLGLHTAGLIQGDQALPYFVLGVLGGMLPDIDSDRSKPVNALFSVLGAGLAFVMTLPLIERFPPLELTLIWGGVYLCVRYGFFEIFSRLTVHRGIWHSWLAIAAVTLATVNIASWLWRLPPEPAWLAGLMAGIGYLTHLSLDEIYSVDLFNARLKRSFGTALKPFSFNNPWSSLAMLATVLALAWLAPPADSWSGRFSLEMPVDLDAVPGMIQDAVEQVRIQATVWWTRLTG

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Crispr_ID: NC_018012_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018012_4

1161625-1162811

TypeI-E

Consensus_repeat	Method
GGGCCTATCCCCGCGAGCGCGGGGGAACC	CRISPRCasFinder
GGGCCTATCCCCGCGAGCGCGGGGGAACC	CRT
GGCCTATCCCCGCGAGCGCGGGG--GAACC	PILER-CR

19 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NC_018012_4

>merge|NC_018012|4|1161625-1162811|CRISPRCasFinder,CRT,PILER-CR
CGGCTCATCCCCGCGAGCGCGGGGAACACCACACCAACGGTATTAGATACCCAGTGGCACGCGATTCATCCCCGCGAGCGCGGGGGAACCCGCCGATTCGCGCGTCCTTTTTGAACCAATTGGGCCTATGCCCGCGAGCGCGGGGGAACCGTCCAGGTCGGCACTCATCGTGACGGTGCCGAGGGCCTATCCCCGCGAGCGCGGGGGAACCAGCCGAGATTCTCGCCAATGACCTGGAAGTCGGGGCCTATCCCCGCGAGCGCGGGGGAACCGGGGCGATGATCGACGCTCTGTATCAGACCGAGGGCCTATCCCCGCGAGCGCGGGGGAACCACATCAAGGGCGTGCTGGCAGCGACAGACTTGGGGCCTATCCCCGCGAGCGCGGGGGAACCGTTTTGTCTGCGTTGTCTACGTTTTTAAGACGGGGCCTATCCCCGCGAGCGCGGGGGAACCCGAGTTCAAAGAATTGATCTTTCTCCGCTTCGGGGCCTATCCCCGCGAGCGCGGGGGAACCTATACGGCCGCTCCCGAGCCGGTCAAGGTGGCGGGCCTATCCCCGCGAGCGCGGGGGAACCCGCGGTGATGACAGCACGAGAAATTTACGAGCGGGCCTATCCCCGCGAGCGCGGGGGAACCGATAAATTGCACGTCAAGCACGCAGGGACAATGGGCCTATCCCCGCGAGCGCGGGGGAACCTCAATACACCTTTTAGCGTGCCGTCCTCGTACGGGCCTATCCCCGCGAGCGCGGGGGAACCCGACAGGCGCGGAACAGGCTGATGCGGGTGTGGGGCCTATCCCCGCGAGCGCGGGGGAACCCACACGGATTTCTGAGCCCTTGCCGGTCTCGCGGGCCTATCCCCGCGAGCGCGGGGGAACCCAGGGCGGCGAATTCCTTCTTGACCATCATCGGGGCCTATCCCCGCGAGCGCGGGGGAACCAGAAATCCGATGCCACGTAAACACCGACTTATGGGCCTATCCCCGCGAGCGCGGGGGAACCGATAAATTGCACGTCAAGCACGCAGGGACAATGGGCCTATCCCCGCGAGCGCGGGGGAACCTTCGGTTTCGCGCGCGGCAATTGCGCGATTTCGGGCCTATCCCCGCGAGCGCGGGGGAACCGCCGTCCCGGTCGCTCCGGGACGGTTTTTTTAAGGCCTATCCCCGCGAGCGCGGGGGAACC

>NC_018012|4|4|1161625-1162811|CRISPRCasFinder
CGGCTCATCCCCGCGAGCGCGGGGAACAC	CACACCAACGGTATTAGATACCCAGTGGCACG
CGATTCATCCCCGCGAGCGCGGGGGAACC	CGCCGATTCGCGCGTCCTTTTTGAACCAATT
GGGCCTATGCCCGCGAGCGCGGGGGAACC	GTCCAGGTCGGCACTCATCGTGACGGTGCCGA
GGGCCTATCCCCGCGAGCGCGGGGGAACC	AGCCGAGATTCTCGCCAATGACCTGGAAGTCG
GGGCCTATCCCCGCGAGCGCGGGGGAACC	GGGGCGATGATCGACGCTCTGTATCAGACCGA
GGGCCTATCCCCGCGAGCGCGGGGGAACC	ACATCAAGGGCGTGCTGGCAGCGACAGACTTG
GGGCCTATCCCCGCGAGCGCGGGGGAACC	GTTTTGTCTGCGTTGTCTACGTTTTTAAGACG
GGGCCTATCCCCGCGAGCGCGGGGGAACC	CGAGTTCAAAGAATTGATCTTTCTCCGCTTCG
GGGCCTATCCCCGCGAGCGCGGGGGAACC	TATACGGCCGCTCCCGAGCCGGTCAAGGTGGC
GGGCCTATCCCCGCGAGCGCGGGGGAACC	CGCGGTGATGACAGCACGAGAAATTTACGAGC
GGGCCTATCCCCGCGAGCGCGGGGGAACC	GATAAATTGCACGTCAAGCACGCAGGGACAAT
GGGCCTATCCCCGCGAGCGCGGGGGAACC	TCAATACACCTTTTAGCGTGCCGTCCTCGTAC
GGGCCTATCCCCGCGAGCGCGGGGGAACC	CGACAGGCGCGGAACAGGCTGATGCGGGTGTG
GGGCCTATCCCCGCGAGCGCGGGGGAACC	CACACGGATTTCTGAGCCCTTGCCGGTCTCGC
GGGCCTATCCCCGCGAGCGCGGGGGAACC	CAGGGCGGCGAATTCCTTCTTGACCATCATCG
GGGCCTATCCCCGCGAGCGCGGGGGAACC	AGAAATCCGATGCCACGTAAACACCGACTTAT
GGGCCTATCCCCGCGAGCGCGGGGGAACC	GATAAATTGCACGTCAAGCACGCAGGGACAAT
GGGCCTATCCCCGCGAGCGCGGGGGAACC	TTCGGTTTCGCGCGCGGCAATTGCGCGATTTC
GGGCCTATCCCCGCGAGCGCGGGGGAACC	GCCGTCCCGGTCGCTCCGGGACGGTTTTTTTA
AGGCCTATCCCCGCGAGCGCGGGGGAACC

>NC_018012|4|2|1161625-1162811|CRT
CGGCTCATCCCCGCGAGCGCGGGGAACAC	CACACCAACGGTATTAGATACCCAGTGGCACG
CGATTCATCCCCGCGAGCGCGGGGGAACC	CGCCGATTCGCGCGTCCTTTTTGAACCAATT
GGGCCTATGCCCGCGAGCGCGGGGGAACC	GTCCAGGTCGGCACTCATCGTGACGGTGCCGA
GGGCCTATCCCCGCGAGCGCGGGGGAACC	AGCCGAGATTCTCGCCAATGACCTGGAAGTCG
GGGCCTATCCCCGCGAGCGCGGGGGAACC	GGGGCGATGATCGACGCTCTGTATCAGACCGA
GGGCCTATCCCCGCGAGCGCGGGGGAACC	ACATCAAGGGCGTGCTGGCAGCGACAGACTTG
GGGCCTATCCCCGCGAGCGCGGGGGAACC	GTTTTGTCTGCGTTGTCTACGTTTTTAAGACG
GGGCCTATCCCCGCGAGCGCGGGGGAACC	CGAGTTCAAAGAATTGATCTTTCTCCGCTTCG
GGGCCTATCCCCGCGAGCGCGGGGGAACC	TATACGGCCGCTCCCGAGCCGGTCAAGGTGGC
GGGCCTATCCCCGCGAGCGCGGGGGAACC	CGCGGTGATGACAGCACGAGAAATTTACGAGC
GGGCCTATCCCCGCGAGCGCGGGGGAACC	GATAAATTGCACGTCAAGCACGCAGGGACAAT
GGGCCTATCCCCGCGAGCGCGGGGGAACC	TCAATACACCTTTTAGCGTGCCGTCCTCGTAC
GGGCCTATCCCCGCGAGCGCGGGGGAACC	CGACAGGCGCGGAACAGGCTGATGCGGGTGTG
GGGCCTATCCCCGCGAGCGCGGGGGAACC	CACACGGATTTCTGAGCCCTTGCCGGTCTCGC
GGGCCTATCCCCGCGAGCGCGGGGGAACC	CAGGGCGGCGAATTCCTTCTTGACCATCATCG
GGGCCTATCCCCGCGAGCGCGGGGGAACC	AGAAATCCGATGCCACGTAAACACCGACTTAT
GGGCCTATCCCCGCGAGCGCGGGGGAACC	GATAAATTGCACGTCAAGCACGCAGGGACAAT
GGGCCTATCCCCGCGAGCGCGGGGGAACC	TTCGGTTTCGCGCGCGGCAATTGCGCGATTTC
GGGCCTATCCCCGCGAGCGCGGGGGAACC	GCCGTCCCGGTCGCTCCGGGACGGTTTTTTTA
AGGCCTATCCCCGCGAGCGCGGGGGAACC

>NC_018012|4|2|1161692-1162567|PILER-CR
ATCCCCGCGAGCGCGGGGGAACCCGCCG	ATTCGCGCGTCCTTTTTGAACCAATTGGGCCT
ATGCCCGCGAGCGCGGGGGAACCGTCCA	GGTCGGCACTCATCGTGACGGTGCCGAGGGCCT
ATCCCCGCGAGCGCGGGGGAACCAGCCG	AGATTCTCGCCAATGACCTGGAAGTCGGGGCCT
ATCCCCGCGAGCGCGGGGGAACCGGGGC	GATGATCGACGCTCTGTATCAGACCGAGGGCCT
ATCCCCGCGAGCGCGGGGGAACCACATC	AAGGGCGTGCTGGCAGCGACAGACTTGGGGCCT
ATCCCCGCGAGCGCGGGGGAACCGTTTT	GTCTGCGTTGTCTACGTTTTTAAGACGGGGCCT
ATCCCCGCGAGCGCGGGGGAACCCGAGT	TCAAAGAATTGATCTTTCTCCGCTTCGGGGCCT
ATCCCCGCGAGCGCGGGGGAACCTATAC	GGCCGCTCCCGAGCCGGTCAAGGTGGCGGGCCT
ATCCCCGCGAGCGCGGGGGAACCCGCGG	TGATGACAGCACGAGAAATTTACGAGCGGGCCT
ATCCCCGCGAGCGCGGGGGAACCGATAA	ATTGCACGTCAAGCACGCAGGGACAATGGGCCT
ATCCCCGCGAGCGCGGGGGAACCTCAAT	ACACCTTTTAGCGTGCCGTCCTCGTACGGGCCT
ATCCCCGCGAGCGCGGGGGAACCCGACA	GGCGCGGAACAGGCTGATGCGGGTGTGGGGCCT
ATCCCCGCGAGCGCGGGGGAACCCACAC	GGATTTCTGAGCCCTTGCCGGTCTCGCGGGCCT
ATCCCCGCGAGCGCGGGGGAACCCAGGG	CGGCGAATTCCTTCTTGACCATCATCGGGGCCT
ATCCCCGCGAGCGCGGGGGAACC

Protein	Signature genes	Signature genes Name	Protein_function
NC_018012.1\|WP_014777595.1\|1169417_1172051_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NC_018012.1\|WP_014777588.1\|1162877_1163174_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|378244
NC_018012.1\|WP_014777589.1\|1163145_1164036_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|187850
NC_018012.1\|WP_014777593.1\|1166781_1167357_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	mkCas0196_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NC_018012.1\|WP_014777579.1\|1149162_1150497_-\|paraquat-inducible-protein-A	unknown	unknown	gnl\|CDD\|377345
NC_018012.1\|WP_014777597.1\|1172324_1172792_+\|DUF2269-domain-containing-protein	unknown	unknown	gnl\|CDD\|370783
NC_018012.1\|WP_014777584.1\|1157408_1157936_-\|Slp-family-lipoprotein	unknown	unknown	gnl\|CDD\|377144
NC_018012.1\|WP_014777586.1\|1158541_1160119_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|225176
NC_018012.1\|WP_014777591.1\|1164742_1165459_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
NC_018012.1\|WP_014777582.1\|1155325_1156696_+\|YihY-family-inner-membrane-protein	unknown	unknown	gnl\|CDD\|377085
NC_018012.1\|WP_014777580.1\|1150516_1154527_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235554
NC_018012.1\|WP_052314961.1\|1160817_1161300_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239738
NC_018012.1\|WP_014777581.1\|1154629_1155151_-\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NC_018012.1\|WP_014777594.1\|1167722_1169402_-\|CRISPR-associated-protein-Cse1	cas8e	cls000028_cas8e_CAS-I-E	gnl\|CDD\|274192
NC_018012.1\|WP_157174367.1\|1167453_1167618_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_041447319.1\|1158008_1158206_-\|Trm112-family-protein	unknown	unknown	gnl\|CDD\|225391
NC_018012.1\|WP_014777583.1\|1156685_1157234_-\|Slp-family-lipoprotein	unknown	unknown	gnl\|CDD\|377144
NC_018012.1\|WP_014777590.1\|1164029_1164746_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|378050
NC_018012.1\|WP_014777592.1\|1165460_1166744_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NC_018012.1\|WP_014777587.1\|1160315_1160762_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_018012.1\|WP_014777595.1\|1169417_1172051_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	7.48206e-90
NC_018012.1\|WP_014777588.1\|1162877_1163174_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	2.48829e-28
NC_018012.1\|WP_014777589.1\|1163145_1164036_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187850	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	7.4005e-108
NC_018012.1\|WP_014777593.1\|1166781_1167357_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	3.77037e-08
NC_018012.1\|WP_014777579.1\|1149162_1150497_-\|paraquat-inducible-protein-A	gnl\|CDD\|377345	pfam04403, PqiA, Paraquat-inducible protein A. Paraquat is a superoxide radical-generating agent. The promoter for the pqiA gene is also inducible by other known superoxide generators. This is predicted to be a family of integral membrane proteins, possibly located in the inner membrane. This family is related to NADH dehydrogenase subunit 2 (pfam00361).	1.7769e-10
NC_018012.1\|WP_014777597.1\|1172324_1172792_+\|DUF2269-domain-containing-protein	gnl\|CDD\|370783	pfam10027, DUF2269, Predicted integral membrane protein (DUF2269). Members of this family of bacterial hypothetical integral membrane proteins have no known function.	1.66637e-23
NC_018012.1\|WP_014777584.1\|1157408_1157936_-\|Slp-family-lipoprotein	gnl\|CDD\|377144	pfam03843, Slp, Outer membrane lipoprotein Slp family.	3.81156e-60
NC_018012.1\|WP_014777591.1\|1164742_1165459_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	4.01591e-53
NC_018012.1\|WP_014777582.1\|1155325_1156696_+\|YihY-family-inner-membrane-protein	gnl\|CDD\|377085	pfam03631, Virul_fac_BrkB, Virulence factor BrkB. This family acts as a virulence factor. In Bordetella pertussis, BrkB is essential for resistance to complement-dependent killing by serum. This family was originally predicted to be ribonuclease BN, but this prediction has since been shown to be incorrect.	1.93238e-42
NC_018012.1\|WP_014777580.1\|1150516_1154527_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
NC_018012.1\|WP_052314961.1\|1160817_1161300_+\|hypothetical-protein	gnl\|CDD\|239738	cd03769, SR_IS607_transposase_like, Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. This subfamily is composed of proteins that catalyze the transposition of insertion sequence (IS) elements such as IS607 from Helicobacter and IS1535 from Mycobacterium, and similar proteins from other bacteria and several archaeal species. IS elements are DNA segments that move to new sites in prokaryotic and eukaryotic genomes causing insertion mutations and gene rearrangements.	3.87907e-12
NC_018012.1\|WP_014777581.1\|1154629_1155151_-\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.32963e-48
NC_018012.1\|WP_014777594.1\|1167722_1169402_-\|CRISPR-associated-protein-Cse1	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	4.08698e-11
NC_018012.1\|WP_041447319.1\|1158008_1158206_-\|Trm112-family-protein	gnl\|CDD\|225391	COG2835, COG2835, Uncharacterized conserved protein [Function unknown].	8.34363e-21
NC_018012.1\|WP_014777583.1\|1156685_1157234_-\|Slp-family-lipoprotein	gnl\|CDD\|377144	pfam03843, Slp, Outer membrane lipoprotein Slp family.	1.18046e-36
NC_018012.1\|WP_014777590.1\|1164029_1164746_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	9.16346e-31
NC_018012.1\|WP_014777592.1\|1165460_1166744_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.38032e-114
NC_018012.1\|WP_014777586.1\|1158541_1160119_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	7.19839e-12

>NC_018012.1|WP_052314961.1|1160817_1161300_+|hypothetical-protein
MRFGAKYVEAALHARGARRLVVDDGELTDDLVADMIAVLTAFRARLDGRRSAANRAKRLVEQCQSQDQASDQDSAEWSTPSAHLPDLDRRSRGNAWRGCGLCFGGRKRFRAQFDLEANGYESLEDWRADWQRARSSQFCKPSAIAFSATSRGDDKPRHPA
>NC_018012.1|WP_014777587.1|1160315_1160762_+|hypothetical-protein
MVAFAQLHAQNHKITELSNVFLYLVRERSMCDTDVACDVFFDLTNRIKEHMELVDRELCGRLISHQDQSVKNTANRFLSGSSEIKRIFSSYVKQWCSQKRHSLTISDHSSFVQDTEQMFALVMDRIQRETEYLYPLIRKLEGEQKQVA
>NC_018012.1|WP_014777586.1|1158541_1160119_+|alpha/beta-fold-hydrolase
MKLDVLKTISNCRGHCLGALLLALAAMLAIAVALWQLTAASAGLRITETQVGGVPITLYRPAGDAPAPSVVIAHGFAGSRQLMQPYAITLARNGYLAVTFDFPGHGRNPAPFVASLMDQEARLRVLLDALEPAVNFALQQPGADGRLALLGHSMAGDVLARYSQMHPDLVEATVLLSPYLSEDAPTAQLRNLLLVYGELEPDMLHQQGFKTLAKTVEGGVESGTLYGDPADGNARRLMLAEGVEHIGVLYGRDGLAAALDWLNQTFERTGTGFLDARGPWLGLLYLGLLTLAWPLSRWLPRAATQPMGAGLGWRRLLPVALAPALLTPLILWKLPTDFLPILLGDYLALHFAVYGLITALGVWLTHDRSDQAVSGHGRFLWRGFAIATIGYLVYITLAFSLTTDRFVTTLLPGPERLPLVLAMMVGTLGYFVADEWLTRGAGAARGGYALTKALFLFSLLGAVALNLDELFFLIIIVPAILVFFLVYGVMSGWVYRRVQHPLVAAIGNGIAFACATAVTFPVVGG
>NC_018012.1|WP_041447319.1|1158008_1158206_-|Trm112-family-protein
MDKKLLDILVCPVTKGPLILDRDRGELISLSAQLAYPIRDDIPVMLEEEARQLLLEEMDGYRQGH
>NC_018012.1|WP_014777584.1|1157408_1157936_-|Slp-family-lipoprotein
MIFRSLSLMLVLIGLVGCVGAVPQAIREASTASPTLTDARESPARHLGRRVRWGGSILRVRNLARVTEIEVLARPLNRFGEPDADAQSLGRFIAEFPGFRDPTDYPSERLLTIVGILVTVETRPVGEFPYRYPVVAIETLHLWPKPIPRYPYPAPYPWYGPWPGIYRTPWYLPWD
>NC_018012.1|WP_014777583.1|1156685_1157234_-|Slp-family-lipoprotein
MHLSSKAYFLAALMSGSVAYGCATREVCVKPVGDRDLTPAEVAASARGTDAVVSWGGRVIETRHLTTGTELEIIGYPLDTCGRPLTHARSLGRFLVRHQGYLEPLDYRMGREVTATGRIGEIAEGQIGDADRRFPVLDETVIRLWPERQPPGDIATRPARPWIGIGIGGGSGHVGGGIGISF
>NC_018012.1|WP_014777582.1|1155325_1156696_+|YihY-family-inner-membrane-protein
MNRLQSIAERIDSLLWGRQTDPQPRWQASLLWLARLLYALLRDLTQGNLSLQSMGLVYTTLLSLVPLLAVSFSVLKGFGVHNQLEPFLLSALEPLGESGVEIVGRIIGFVDNMQVGVLGSVGLATLIFTVISLIQKIEQVFNSTWRVTEQRRFAQRFGLYLSVLLVGPVLFFSAVGLSASLSHQLAGQPLIATPAFAALTETFGQLGPYLMISLTFAFFYMVIPSTRVKPLSALIGALVAGLLWELVGDLFSAFMAGSTRFMAIYSSLAILMLLMIWIHIGWSILLIGASIAFYHQHPEYLTTRAHDLRLSNRLRERLALMVAGQIAHRHATGGPPWTCHDLSRALAVPTINTQSTLRMLERSGFLLRTADEDPGYVPARAPESIRIADLLDATRRFEERDSGCPGTVLDAGVRQVEQDIAAAMTGALKDMTLKDFAALQRRTVATPRPDTAHAKS
>NC_018012.1|WP_014777581.1|1154629_1155151_-|TlpA-family-protein-disulfide-reductase
MKPLLRCLFVLLPCWFGTVVYAVEELPLTPVEDQAAAPDFNLPGPDGRTYRLADYRGKPIILNFWATWCPPCRAEMPSMQRAHEILASEGIAVIAINVGDDVEAVRQFLADTPVSFPLPMDADSTIAQRYPVIGLPTTFVIDAEGRLAFSATGEREWDAPALLDQVRALKRPR
>NC_018012.1|WP_014777580.1|1150516_1154527_-|DNA-polymerase-III-subunit-alpha
MDPRFVHLHLHSEYSLVDGLVRIKPLVKAVAAAGMPAVAVTDQVNLFSLVRFYKAAVGAGLKPIAGADLWVRNPEDANKPHRLVLLVQDDRGYGNLTRLISRGYVEGQHLGLPQVEPDWIESAADGLIALSGGPQGDVARALLNGRPEVAERQLDRWLTAFGDRYYLELVRTGRESEAELIELSVDLALRRGVPVVATNDVRFLAASDFEAHEARVCIHEGRTLDDPRRPRLYSDEQYLRTPGEMAELFADLPEALENSVEIAKRCNLELTLGKNYLPAFPVPAGMTIDAFFAEQSRQGLDWRLERILDRAAPDFAEQRRAYDERLALELDVIVQMGFPGYFLIVADFIQWAKDNGIPVGPGRGSGAGSLVAYALKITDLDPIEHDLLFERFLNPERVSMPDFDVDFCMEGRDRVIDYVADKYGREAVSQIITFGTMAAKAVVRDVGRVMGHPYGFVDRVAKMVPFELGMTLGKALAESDDLKLAYQDDEEVRALIDMARKLEGLARNAGKHAGGVVIAPTKLTDFAPLYCEPGGVNLVTQFDKDDVEQVGLVKFDFLGLRTLTIIDWALKTINPIRLSQGEPPVEIDRIDAHDERAFNLLKQCQTTAVFQLESRGMKELIKKLQPDSFGDITALVALFRPGPLQSGMVDDFINRKHGRADVAYPHPDLEPVLKPTYGIILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKASEMDKQRAIFEQGSVARGIDASVATYIFDLMDKFAGYGFNKTVHRLTKIRTLTGDQHIEDCRAGDVVFSMNPDGSLVQSTVVVLHDHGQVPLWLVEFDDGTSEQCTLDHKWLTDDGQVPLWKILQTNERVWGTDPAVREQGQGELAGHLVFRQPVRATFVGWHQGYDLEVDHPEHNFLLASGLCCSNSHSAAYALVSYQTLWLKAHYPAAFMAAVLSADMDNTDKVVTLIDECRAMKLRVEPPTINRSAYRFTIGDAGTVIYGMGAIKGVGEAAIESILEVRAAGGDFRDLWDFCRRIDLHKVNRRVLEALIRAGALDGLGPNRATLMAQLPLALKTAEQHNATQAAGQTDLFGALEPTAAPPLDPQLASEIHADWEDEQRLQGEKETLGLYLTGHPIDRYEAELKAMGGARIARLLETDRELGRRDRRDREKRTVVGLVVSVRHGKTQRGRMGSVLLDDRTGRIEATVFSELYDQFRNLLVPDQLLSIAGSLNFDEFRDAWTLRADAVRTFEQARESAADHLALILDLSDPADYAQGAARIESLREALAAFRDGDLPVRLRYRRPGAVGDLMLGNAWRVQPTDALLKRLRQLLGSDAVKVSYERVLLSAPMPETQTRRLASV
>NC_018012.1|WP_014777579.1|1149162_1150497_-|paraquat-inducible-protein-A
MSGFFIVKRVFATLLFSAAVALLVHLIGDLNRVKTLKTDLAEIESVRYGLLDADQWVSKISAIVERQVSEFELTAENRPRIKKVVEQVLETMLVEIERYLRQRNLSGGGTWMDQLQGVLQQGVQDLLIDFRKLRKKIPQYADAVVEQLGKPEAKEEIKTQVLGLLRQSADSTFARTDRAHLEAVFVRQGCIESAACSAKLETLIQAARLPVFQQLAGLAGLVAGLFLICLSGSARMAKNIDLTVESRRGRGGFDSFKLLLLTGAILILLVGGLLTPMIEIDARIGELRLEFLGEPLVFTNQVLYFQSKSIFEVVRILAETGAADMLLVAVLITLFSVIFPALKLIATYVYYYDFRQARGSGWVGFFALRSGKWSMADVLVIAIFMAYIGFDGLVASQLGSLGRVGEGVELLTTNGTSLEPGFYLFLSFVMASLLLSAVLEREFE
>NC_018012.1|WP_014777588.1|1162877_1163174_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MPLVMIVTRDVADRYRGYLGSLMLEVSPAVYISPRMNPGVRSRTWTVLTGWHTTEPQGSIVMVWRDVNATGGVGIATLGTPPRELVDVDGLWLVRKPL
>NC_018012.1|WP_014777589.1|1163145_1164036_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MLKGRLGLETSRMPHADRHGLIWFERGELCVIDGCLHFFQGKDSLTPYSVQIPHQTVSMILLGPGSTVTHDALRLLARHGTLMAAVGEDGVRCYTAPPLMPDRSDIARRQAELWGSPRRRISVARQMYALRLGEVLPHRDLDTLRGIEGSRVKATYQLMAQRYGIEWKGRHYDRANPNATDIPNQAINHAATAVQAAAAIAVQAVAAIPQLGFIHEDSGQSFILDIADLFREAITLKIAFTVAKKAETDTQTIDRLVRREAATVFRKQDVIPAMIDRIKKVIRMEETDASGHDRDP
>NC_018012.1|WP_014777590.1|1164029_1164746_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MSLYLLHCSPDPEALAIWATRHRLLSPDGDDGYALHALLTAAFGEQSPKPFRYLGARQGLLAYSDQPPALLHDNAALATPDVARALGLNSLAVRAFPTTWANGQMLSFEVRVRPIVRPPRGPERDLFQYTAEQSESPEKLKREVVYVDWLRQKFAEQDAAELSQVSMDAFRLSRVIRRTGTNDQGQRQALAPSGPDAVFKGQLRVGESDAFARLLKRGIGRHRAFGFGMLLLKPAHSC
>NC_018012.1|WP_014777591.1|1164742_1165459_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSRHLLLRLEAPLMAFGGETIDNLGIIRDFPALSMVTGLLANALGWRREDTAQHDRLQERLVMGARLERPGVRLQDNQNARLSKDDKGWTTWGKPEERAGGAGTYESPHRRFRDYHADLTMLVALRLEPAEEPPTLDDLATALDHPARPLFIGRKPCLPSHRLFAGWHDGESVLQALRMAPWSHSSPDGARLQWPEGEGTLPGDRVLDLCDERNWTSGVHGGWRPIREGRIRIEGTPA
>NC_018012.1|WP_014777592.1|1165460_1166744_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTQPRFIQIHTLHTYPAALINRDDAGLAKRLPFGNAVRTRISSQCLKRHWRKTDDPFSLSMLHVPMAVRSRLFFEKIAEILVSASVSDQIANAIAFGLREAMTKKDLGKLIKEAKKPPKKNKKAQINEEDFEEPTEETSTERKQAFLLGYPEYEYLKKVCLEVSQLPDICEKNARLYLFEKIKAEQENLKQIALGCGLESALFGRMVTSDVLAGREAAIYVGHAFTVHAAQVESDYFTVVDDLTGDSGELGSAGIFDTELTSGLYYGYVVVDVRQLVENLEGIEAKDCFADTTPAEKRKLAGTVVEHLLHLIATVSPGAKRGSTAPFDWAKFMLVEAGDWQPRSLAGAFHNALPLSLPLSARDGRSIRERAVACLSDEIAKMDEAYGATLTRRVMALDPVEIPQGQRLNLNALATWAAEAITKGVC
>NC_018012.1|WP_014777593.1|1166781_1167357_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MTFIASPHPEQERPDTQKAPPIAKLAQLIGQAARFNGDLHGLGKGEKAALARLDPDGELRPHQVAALARALIYAGLEPERWSPETATENWRRWALIAHGMALAGHASGSLGKQLCAAGVSESRVTKLLTSRGDALRQLLPRLLRLLASKEVAPNWHELDNLLRHEGQNEETAEAIRTQIAGRYFSALAKSN
>NC_018012.1|WP_157174367.1|1167453_1167618_-|hypothetical-protein
MDAAVSAYLDDLHDTQIAEEVCRLLDAGDETTTPWAEVEQRLGLAIYFPLPQLG
>NC_018012.1|WP_014777594.1|1167722_1169402_-|CRISPR-associated-protein-Cse1
MTLRYSLLDESLIGARCFSDRQRVGYSLPALFVALAEDRIRDFPALRPHQRHPWHAFLVQLAAMAIHQAGRTDPFSDESAWKAGLLALTPDHPDGAAWCLIAMPDRPAFLQAPVPEGTIDDWEDDKPTPDSLDILVTARNHDLKRQRITRAAADDWIFALINLQTASPQNGQKNYGVCRMNGGFSSRPGIGIEPPGGPGRRWLRDLHIALAERARLVDQTQFPYAETGGICLLWLDPWDGNSGKSFAALDPFFIEISRRIRLIETNNHIRARRIGSATKRIAKQETDDRKGNTGDLWTPIKESAKRESLGISINGFSYERMVELLNGKKYQKPPAQSFISEDPKVGLTIIARAIAGSNSSTDGYHERRILVSPGMRRLMTRKTDEFAAIAEGRVSDIGKVYDLLVFSLKVLFDNGKSRKKSGDFSKTISQKARAFSKPFEQYEDERFFDGPLGLNEQIDAADPDAVRLSWYRDMAKRAEDILRSAFKAGPRCGEQRYRARAAAMNYLWSKKTGLRSHHVLPTLAQYYEDQGKDQRHASPSPTDQISHNPIPAQLELTLQ
>NC_018012.1|WP_014777595.1|1169417_1172051_-|CRISPR-associated-helicase/endonuclease-Cas3
MKAFNQCDAFGKLERDQSETVIAWHSLIDHLIDVAACFVRLCRCRSIRRAMEQSAGRALTANDIARLAVLVFLHDLGKANSGFQAKRWPGGQAPTGWPDCAGHRHGHSVEALDLLRDEAFLEPLIDCLPVAEIDTWGEAVFPLFRASISHHGRPVSERPPGDWPRSIWKPVIDAHGNVVYDPASVLVEIGRQARALYPEAFTPGGISLPEASALDHLFAGLVQLADWLGSDTEFFPFSAVGEDRAWTSVDYADRAVMSLGLDAADSRRVLEALSPSFAQVFDDNSPYPIQTAMDAVDLGPLMVLESETGSGKTEAALWRFVHLFERGEVDSLYFALPTRVSASQVYERICKAVNNLWSTNRPIVVRALPGYAAADGHEPKALPDFKVQWPDDPADEEAHRRWAAESPKRFLAAPIAVGTIDQALLGALRVRHAHLRHALLARSLLVVDEVHASDPYMTVLLERLLQAHLGCGGHALLLSATLGSSARARYLAVGQGSRSAPPAFQAACDAPYPALSDRLAMRAIASTIRPKSVTWSLRDLIDDPGAIAGLAIDAASAGAKVLIVRNTVPAAIAVFQAIEKLAPDLLFEVNGARTLHHSRFSREDRPLLDAAIQAQLGKKNRPSGPRIVIGTQTLEQSLDLDADLLITDLCPMDVLLQRIGRLHRHPPAQRPLAYRSPQAWILTPTNHDLSPLLKNSRHGLGPFRDGDGIYPDLRNVEATRRLILERPSITIPADNRILVESATHTDHLAAMERLGEDWARLGERFDGRASAKRTIGYQSGLEIDKAFDKQQPFPNEKEFDIATRLGARDRLLIFDSAPIGPFGSSFTHLPIRHFLISDEVAGDTQPIILTNDNGELLFSLGPAHFRYSRLGLEKIEP
>NC_018012.1|WP_014777597.1|1172324_1172792_+|DUF2269-domain-containing-protein
MCYALLKTLHLLGVVLLVGNVIVTLVWKLAADRNGDPRVVAFGQRLVTLTDWWFTAGGVVLIILGGYGAALVAGLDLLAVRWLFWGQVLFGLSGLLWVGILIPAQIRQARQARAFATTGAIPTGYWRDARRWTWWGILAIVPLLGALWLMISKPT

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Crispr_ID: NC_018012_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018012_5

1333353-1333539

Unclear

Consensus_repeat	Method
GGGTAGCCATCACTGCCATTCAGTTAAGCCGTTCGTGGTGAGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018012_5

>merge|NC_018012|5|1333353-1333539|CRISPRCasFinder
GGGTAGCCATCACTGCCATTCAGTTAAGCCGTTCGTGGTGAGGCAGAATCTGGCCTACATGGACCGCTTCTGGGTAGCCATCACGGCCATTCAGTTAAGCCGTTCGTGGTGAGGCAAAATCTGGCCTACATGGACCGCTTCTGGGTAGCCATCACGGCCATTCAGTTAAGCCGTTCGTGGTGAGGCC

>NC_018012|5|5|1333353-1333539|CRISPRCasFinder
GGGTAGCCATCACTGCCATTCAGTTAAGCCGTTCGTGGTGAGGCA	GAATCTGGCCTACATGGACCGCTTCTGGGTAGCCATCACGGCCATTCAGTTAAGCCGTTCGTGGTGAGGCAAAATCTGGCCTACATGGACCGCTTCT
GGGTAGCCATCACGGCCATTCAGTTAAGCCGTTCGTGGTGAGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_018012.1\|WP_014777727.1\|1322249_1322861_-\|chemoreceptor-glutamine-deamidase-CheD	unknown	unknown	gnl\|CDD\|237396
NC_018012.1\|WP_014777737.1\|1334359_1334548_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|187577
NC_018012.1\|WP_014777726.1\|1321003_1322191_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NC_018012.1\|WP_014777729.1\|1323694_1325929_-\|MCP-four-helix-bundle-domain-containing-protein	unknown	unknown	gnl\|CDD\|185008
NC_018012.1\|WP_014777734.1\|1333689_1333902_+\|UPF0175-family-protein	unknown	unknown	gnl\|CDD\|377095
NC_018012.1\|WP_014777731.1\|1326552_1328832_-\|chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|223716
NC_018012.1\|WP_157174370.1\|1338011_1338317_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014777730.1\|1326020_1326524_-\|chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|182587
NC_018012.1\|WP_041446846.1\|1322862_1323714_-\|chemotaxis-protein-CheR	unknown	unknown	gnl\|CDD\|236725
NC_018012.1\|WP_014777735.1\|1333898_1334042_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014777725.1\|1319885_1320932_-\|chemotaxis-response-regulator-protein-glutamate-methylesterase	unknown	unknown	gnl\|CDD\|234828
NC_018012.1\|WP_157174369.1\|1337674_1337938_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014777732.1\|1328866_1329232_-\|response-regulator	unknown	unknown	gnl\|CDD\|381110
NC_018012.1\|WP_014777740.1\|1336088_1336622_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014777724.1\|1318267_1319815_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NC_018012.1\|WP_014777739.1\|1335480_1335753_+\|BrnT-family-toxin	unknown	unknown	gnl\|CDD\|367913
NC_018012.1\|WP_157174583.1\|1317131_1318121_-\|response-regulator	unknown	unknown	gnl\|CDD\|225971
NC_018012.1\|WP_014777741.1\|1336773_1337553_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014777736.1\|1334114_1334360_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014777738.1\|1334650_1335376_+\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142

Protein	Function_ID	Function_description	E-value
NC_018012.1\|WP_014777727.1\|1322249_1322861_-\|chemoreceptor-glutamine-deamidase-CheD	gnl\|CDD\|237396	PRK13487, PRK13487, chemoreceptor glutamine deamidase CheD; Provisional.	2.11535e-116
NC_018012.1\|WP_014777737.1\|1334359_1334548_+\|hypothetical-protein	gnl\|CDD\|187577	cd05267, SDR_a6, atypical (a) SDRs, subgroup 6. These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	0.000948274
NC_018012.1\|WP_014777726.1\|1321003_1322191_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	4.83239e-27
NC_018012.1\|WP_014777729.1\|1323694_1325929_-\|MCP-four-helix-bundle-domain-containing-protein	gnl\|CDD\|185008	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional.	1.53191e-104
NC_018012.1\|WP_014777734.1\|1333689_1333902_+\|UPF0175-family-protein	gnl\|CDD\|377095	pfam03683, UPF0175, Uncharacterized protein family (UPF0175). This family contains small proteins of unknown function.	2.97391e-16
NC_018012.1\|WP_014777731.1\|1326552_1328832_-\|chemotaxis-protein-CheW	gnl\|CDD\|223716	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms].	0
NC_018012.1\|WP_014777730.1\|1326020_1326524_-\|chemotaxis-protein-CheW	gnl\|CDD\|182587	PRK10612, PRK10612, chemotaxis protein CheW.	1.70245e-74
NC_018012.1\|WP_041446846.1\|1322862_1323714_-\|chemotaxis-protein-CheR	gnl\|CDD\|236725	PRK10611, PRK10611, protein-glutamate O-methyltransferase CheR.	3.74166e-113
NC_018012.1\|WP_014777739.1\|1335480_1335753_+\|BrnT-family-toxin	gnl\|CDD\|367913	pfam04365, BrnT_toxin, Ribonuclease toxin, BrnT, of type II toxin-antitoxin system. BrnT is a ribonuclease toxin of a type II toxin-antitoxin system that exhibits a RelE-like fold. The antitoxin that neutralizes this toxin is pfam14384. BrnT is found in bacteria, archaea, bacteriophage, and plasmids. BrnT-BrnA forms a 2:2 tetrameric complex and autoregulates its own expression, which is induced by a number of different environmental stresses. Expression of BrnT alone results in cessation of bacterial growth which can be rescued after subsequent expression of BrnA.	2.75289e-30
NC_018012.1\|WP_014777725.1\|1319885_1320932_-\|chemotaxis-response-regulator-protein-glutamate-methylesterase	gnl\|CDD\|234828	PRK00742, PRK00742, chemotaxis-specific protein-glutamate methyltransferase CheB.	9.29519e-178
NC_018012.1\|WP_014777732.1\|1328866_1329232_-\|response-regulator	gnl\|CDD\|381110	cd17562, REC_CheY4-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY4 and similar CheY family proteins. CheY family chemotaxis response regulators (RRs) comprise about 17% of bacterial RRs and almost half of all RRs in archaea. This subfamily contains Vibrio cholerae CheY4 and similar CheY family RRs. CheY proteins control bacterial motility and participate in signaling phosphorelays and in protein-protein interactions. CheY RRs contain only the REC domain with no output/effector domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.37001e-74
NC_018012.1\|WP_014777724.1\|1318267_1319815_-\|PAS-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.14301e-49
NC_018012.1\|WP_157174583.1\|1317131_1318121_-\|response-regulator	gnl\|CDD\|225971	COG3437, COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms].	5.67931e-99
NC_018012.1\|WP_014777738.1\|1334650_1335376_+\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	0.000125725

>NC_018012.1|WP_014777732.1|1328866_1329232_-|response-regulator
MAKTILTVDDSASIRQMVSYTLKDAGYTVTEAVDGQDGLDKARAGRFDLVFTDQNMPRMDGLSLIKQLRGLPQYQSVPILMLTTESSDAMKSQGRAAGATGWLVKPFDPQKLLDVVRKVIG
>NC_018012.1|WP_014777731.1|1326552_1328832_-|chemotaxis-protein-CheW
MTIDMSRFYQVFFDEAGEHLAAMESLLLELDVDAPDLETLNAIFRAAHSIKGGAGTFGFLDMAQLTHVLETLLDRLRKQETRPTVEMIDAFLGAGDVLKAQLAAHQEGAEYEDPRIAEVSDRLERLSEIAAPPPACPAMRPPSPSLPGADASASSWLIEFRSDAIDFQSGANLRALRDVLAEMGTLEWLTGEDAEVCVWRLRTAFGRESIVETFAFVCDPECISIQADAAGSPPSLVDTDADDDAGFGFFAGAPGSERFDERVLDQMDAADSHDPGFGFFPGAPGSERTLDQELDGFGLFGGSPGMEQVAAVAHQARDEREQGYGFFDLAPGAPEAEAGDAVLSGRTAGGRAAPVAGTPTAVAPTRRPAAADTSIRVGVEKVDQLINLVGELVITHAMLAESASDLDPVIHERIFGGLSNLERNSRDLQQAVMSIRMLPISFVFNRFPRLVRDTAASLGKKVTLTLIGEETELDKGLIERLADPLNHLVRNSIDHGIEQPERRREAGKSETGEITLRASHRGGSILVEVRDDGAGLDRDRLLAKAVQQGIPMPENPSDKEVWQLIFHAGFSTAERVTDISGRGVGMDVVRRNIEAMNGRVEIDSLPGRGTHITIRLPLTLAILDGLSVRMGSELFILPLTAIQESLQPTRDQFKTVAGKGRVAHVNGDYLPLVVLREVFRLDGQPLRHEDGILVIVDTSEGRAALLVDELVAQHQVVIKSLETNYRKVDGVSGATIMGDGRVALILDVDALVRLNRKNA
>NC_018012.1|WP_014777730.1|1326020_1326524_-|chemotaxis-protein-CheW
MNDERKDGAMINPEGAREYLTFTLGDEEYGIDILKVQEIRGFDAVTRIANAPAFIKGVINMRGVIVPILDMRLKFNLGQVDYNEFTVVIILNVAGRVVGIVVDGVSDVIALKREQIRPAPEFGALMDTAYIDGLTTLDDRMVIMVDIEKLINSGEMGLVDQVGSDMA
>NC_018012.1|WP_014777729.1|1323694_1325929_-|MCP-four-helix-bundle-domain-containing-protein
MAKMTVAARLGMGFGAVLALLGVVALIGLFSIHTLNKDVGRLHTDLFPKTIWANNIVDTVNEGAQALRNALILKDPRAIARELERIGEMRKFIDENAEALKRTIVSPEGIKQLAALTDARSSFIGSQDRLIALLRAGSRDEAGDLLFGEFRALQQTYFNAVTSLIKYQTDLMDKTGDEAELNADFATLVMLILSALALLLGIGTGIWITRALTKQLGGEPDYAAAMVQAVSAGDLSHTIAIQPGDTASLLASLKQMQEGLRRLVGEIAAIVQAATRGDFSQRLELGDKQGFGREIGEGLNQLAATTEIGLKDVTRVANALAIGDLSQTIDRDYPGLFGETKNGVNGTVTALADVVNEIRRIVDAAVQGDFSARLDLTGKQGFASEIAQLLNQLSDTTEVGLKDVMRVASALSEGDLTQTITQDYPGLFGETTTGVNTTVANLKELVLRIREAVETIGTAANEIATGNQDLSQRTEEQASSLEETASSMEELTSTVKQNADNARQANQLAVAASDVAVKGDDMVGASVETMTGIAESSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRNLAQRSANAAKEIKTMIGDSVSRVDAGTLQVNETGQRMRDIVQSIKRVTDLVADISAASVEQSTGIEQINQAIVQMDDVTQQNAALVEQAAAAAEAMADQASRLGEVVAVFKVDPVDRRAMVARSAPTATARRMSAAPARKSTLASLLPIKTTDDDEWSEF
>NC_018012.1|WP_041446846.1|1322862_1323714_-|chemotaxis-protein-CheR
MNGQNFDREFQFTAHDFERIRSLIYEHAGISLSAGKTDMVYSRIARRLRATGLTSFEDYLAYLNREPDEWQHFTNSLTTNLTSFFREPHHFPVLAEQVIDAKRKGRSPILLWSSACSTGEEPYSMAMTVIDALGTWTPSVKILATDLDTNVVRQAAEGIYPMERLEKLPERDLKRFFLRGKGSQEGMARIRPEVRALVRFHPLNLLSDQWPIKGPFDAIFCRNVLIYFDKSTQHNLLARFHPLLLQDGRLFVGHSESLTQVADLFKLQGKTVYVPHGQPMRHA
>NC_018012.1|WP_014777727.1|1322249_1322861_-|chemoreceptor-glutamine-deamidase-CheD
MSHRCEEMLAPNLYFDRHFDMDAVKILPGEYYVSVRELLMVTVLGSCVAACVRDSVSGIGGINHFMLPDDRRDDDSRFGRSMRYGDYAMEILVNQLLKLGARRSNLEAKVFGGGNVLPGFKNHVVGERNSRFVIDYLAVEGIPVVARDLLGNYPRKVYFFPNSGRVLVKKLRSMHNDTIIERELSYSETLRQSKVEGDIELFS
>NC_018012.1|WP_014777726.1|1321003_1322191_-|methyl-accepting-chemotaxis-protein
MFDTLRPHWPPLLMSVAALMQMLLMPDSLPSWGGLLAIALAWPLSLMLGSASARPRGVMVAPDVSQPAERELWDLVVETDQLIGPQMLELRALIRQATDLIGHAAIDLQSSFAGLSTESRSQHQLVMRLVTRDQHSDAQDADFIDLNAFLESNSQLHMENVNRLIDMGKHSVKVAHQIDDLSSQMNEIFSRLESAKRIARQTNLLALNAAIEAARAGEAGRGFAVVAQEVRKLSQDAAEFNDQIRHQVEQAQLIFVETRDIVGRMASQDMNASITAKGSMDDMVHRVQSVNRMMAAGLEELAVVVERVQDNVGAAVRLLQFEDIARQVLGQAEMRIDFMDRFVAELRQIPLGRIRSSEDVTQSKTRLEHLRDQLIAASHRPVDQKSMHEGDIELF
>NC_018012.1|WP_014777725.1|1319885_1320932_-|chemotaxis-response-regulator-protein-glutamate-methylesterase
MAEPIRVLIVDDSALVRQILSEILETAAGIEVVGTAEDPYVAREKIKALAPDVLTLDVEMPRMDGLTFLRNLMRLRPMPVVMVSSLTARGAEVTLQALELGAVDFVRKPDQGLAQGLPEYASELIDKIRMAARVGVRPLTFRDAAIRPRAIQSCRASDRVLVIGASTGGTEAIREVLLRLPPDTPGVVIAQHIPAGFSAAFAERMNRQTGLVVKEAEDGDRVMVGHAYIAPGNRHLRLVREGMHYVCRLDDGELVNRHRPSVDVLFRSVAQAAGTKACAALLTGMGADGAQGLKELHDLGVHTIAQNEATSVVWGMPGEAVKRGAASEILPLAEIAAALSAAATFPRR
>NC_018012.1|WP_014777724.1|1318267_1319815_-|PAS-domain-containing-protein
MVNRKEKADDSELLRWKMRVMEAINSGVSVADAREPDLPLVYANPAFLAMTGYTAAEILGRNCRFLQAHDTRQPEIETIRAALREGRETSVLLRNYRKDGSLFWNQLTLAPVRDQCGQITHYVGIQQDMTALKEAQMLAERAQRYAQSIIDSLQALICVVDVTGAVQSVNRSWRQCLASSGVDLTRLSEGGNYLAFCDQCQCAGQEEAGLLAQGIRDVLAGTCDSFEIRMPLCVTSRHETYLIRVKPLLETIDGRPAVVISHQDVTAELQFQVDLRKAKEEAEQANQAKSDFLSQMSHELRTPMNAVLGFAQLLECDDRLDEIQLESVQEILHGGRQLLRLLNELLDLSNLESGQIDVVLESVVLESLVSDCFALVEPLARVRGVVLRAGAMRGLAMLADRRRLKQLLVNLLSNAILYNSPEGCVSLDVLPVQDSPRALRLWVSDTGPGIPPSRMTELFQPFQRLNADDPQVEGNGIGLAACGRIAEAMGGRVGVESVLGEGSRFWIELPLAEST
>NC_018012.1|WP_157174583.1|1317131_1318121_-|response-regulator
MDRLLRAEGYANLVLIQDPRDVMSAYREAPTDLILLDIRMPHLTGFDIIKQIVDLEDPLAPPILVLTAQHSRDYMLRALQAGARDFIGKPFDRAEVVARVRNMLDVQLALRMIHAQRDVLKAIVHERTREICATRLQVVQRLGRAAEYRDNETGRHILRMSHISTLIAQRLGWDEEHCEIMLHASPMHDIGKIGIPDRILLKPGKLDPEEWEIMQTHATIGGDLLSGDDSDLLRMAREIALSHHEKWDGSGYPLGLAGESIPLTGRIVALADVFDALTSERPYKKAWGIDESLALIRSEAGRHFEPRLTALFLQLIPEILAIRDRYADV
>NC_018012.1|WP_014777734.1|1333689_1333902_+|UPF0175-family-protein
MPTDPPERFAAEARFLLALKLFELGRVSSGKAGRLCGMGRVEFLLAASRAGTPVVTLSTDEMASEFSWDD
>NC_018012.1|WP_014777735.1|1333898_1334042_+|hypothetical-protein
MIDEPRGRRIAHQIKLDGVDKLKFFREMLDAARRILEVRQVVEKLTE
>NC_018012.1|WP_014777736.1|1334114_1334360_+|hypothetical-protein
MQAIELVTQISAEHELHLRLPEHTATGSARVIVLFETDVSSSHRGNLDDFLDSLPLNRSGGIGRDEIMRGIDEERAGWDEH
>NC_018012.1|WP_014777737.1|1334359_1334548_+|hypothetical-protein
MARLYLDACMIIDLVEGDAEQQKRLKAALRGQDVVSSELARLESRIGALRAWPPRGETVSAP
>NC_018012.1|WP_014777738.1|1334650_1335376_+|trypsin-like-peptidase-domain-containing-protein
MLEWYEAVDALKPRMVRIATPVGTGSGFLLPWQSKSGLCAVATAAHVVDHAFYWEQPIRLDQVETGNSVLIRQEQRAIFSNALLDTAVIVFERGAISQPDGNLEFVPEEKYLRVGNEVGWLGFPAITPSLCFFSGRISAWRQDEKAYLIDGVAINGVSGGVVFALDIDKPRVVGVVSAYVPNRATGEVLPGLAIARDVSYLHQQATNFASLDEARSAQSIPEPPVAQAVESEIPSTPTRAG
>NC_018012.1|WP_014777739.1|1335480_1335753_+|BrnT-family-toxin
MKLDWDIKKAAANLRKHGVSFQEAGTVFGDPMALTFDDPDHSVGERRLLTFGVTRTSKFLIVCHTEEAGITRIISAREMNKRERRIYEEG
>NC_018012.1|WP_014777740.1|1336088_1336622_+|hypothetical-protein
MDDQLLKKYLQYASTEEAFAVLFVKKHLAQAKGHWVDIVDCRRYEMSSDNLHFRFVIGGLYKRKIQPRYPSKSAYTIDGKFDEHGYYLMVRALTWETAHKDIEQQKSKNEASRKFKITGTSYDKNRGNKDFFRKDAPPEIKVLANNLNDRTNPLWDQALRYANKPEFIYEIKKIYIN
>NC_018012.1|WP_014777741.1|1336773_1337553_+|hypothetical-protein
MRYLVYIDILGFSELVQRDASTVEWLYSVIDDLNAHRHHAFKTIVFSDTVLIYSDLCCSDESCHEYMSMYAIEFSQDLFYRISRRGLFFRAVIDYGDFEHSRLRNCEKFYGTSLIRCYQLEKEVPCIGTFITEAASQHQNIFPMSRYTEALWFVYFQQNYYRFSENYKGWPNLSLSVLDQELSTHLIAQEMYLFKILTKNAREHALPNVRQKYQAYLEFYRSRYPWPLNDWQTNGFGMQSIGVKGNWRSVYRDVIAEQY
>NC_018012.1|WP_157174369.1|1337674_1337938_+|hypothetical-protein
MKVKLYRGASQPKYLLYLAADADISELPDDAKGAIKAVGDLTLIREEDLSQKSDEFSNEIKNNIKEKGAFFSKLEVRFEEVRCGPPK
>NC_018012.1|WP_157174370.1|1338011_1338317_+|hypothetical-protein
MLKLAKIVIKSLQGFFREEIEMSRSEMGYRVQEDQVKRLLNRFAGFSTVEITDVYGRPITLPLRRGADGGIDVIFTISAPTEHGASIVYGRVRNILLNNDY

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Crispr_ID: NC_018012_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018012_6

1764703-1764792

Orphan

Consensus_repeat	Method
GCGCCGAACCGGGCGCGCGCGGGTGCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018012_6

>merge|NC_018012|6|1764703-1764792|CRISPRCasFinder
GCGCCGAACCGGGCGCGCGCGGGTGCTGCCCGACCAGGCCATGTATCAGGCCAAGCTATCCGCGCCGAACCGGGCGCGCGCGGGTGCTGC

>NC_018012|6|6|1764703-1764792|CRISPRCasFinder
GCGCCGAACCGGGCGCGCGCGGGTGCTGC	CCGACCAGGCCATGTATCAGGCCAAGCTATCC
GCGCCGAACCGGGCGCGCGCGGGTGCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_018012.1\|WP_157174397.1\|1752866_1753460_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|214861
NC_018012.1\|WP_014778075.1\|1771686_1772070_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_052314988.1\|1775857_1776052_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238562
NC_018012.1\|WP_157174401.1\|1772573_1774901_+\|Fe(2+)-transporter-permease-subunit-FeoB	unknown	unknown	gnl\|CDD\|236563
NC_018012.1\|WP_041447215.1\|1756154_1757264_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NC_018012.1\|WP_014778076.1\|1772230_1772560_+\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|214896
NC_018012.1\|WP_157174400.1\|1766306_1766444_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014778078.1\|1774955_1775183_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_052314989.1\|1776048_1776378_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238562
NC_018012.1\|WP_157174396.1\|1750433_1750610_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014778074.1\|1769967_1771674_-\|potassium-channel-protein	unknown	unknown	gnl\|CDD\|367001
NC_018012.1\|WP_014778068.1\|1758378_1759374_+\|HupE/UreJ-family-protein	unknown	unknown	gnl\|CDD\|379373
NC_018012.1\|WP_014778069.1\|1759761_1760199_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014778072.1\|1767862_1768426_-\|hemerythrin-domain-containing-protein	unknown	unknown	gnl\|CDD\|226454
NC_018012.1\|WP_052314986.1\|1753770_1756242_+\|DUF3604-domain-containing-protein	unknown	unknown	gnl\|CDD\|371976
NC_018012.1\|WP_052314987.1\|1757461_1758382_+\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|379040
NC_018012.1\|WP_041447215.1\|1751135_1752245_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NC_018012.1\|WP_041446891.1\|1750619_1750877_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_041446892.1\|1752312_1752726_-\|DUF4158-domain-containing-protein	unknown	unknown	gnl\|CDD\|379339
NC_018012.1\|WP_014778071.1\|1766744_1767866_-\|ferrochelatase	unknown	unknown	gnl\|CDD\|234585

Protein	Function_ID	Function_description	E-value
NC_018012.1\|WP_157174397.1\|1752866_1753460_+\|recombinase-family-protein	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	8.92859e-46
NC_018012.1\|WP_014778076.1\|1772230_1772560_+\|ferrous-iron-transport-protein-A	gnl\|CDD\|214896	smart00899, FeoA, This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C-terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble SH3-domain protein probably located in the cytosol; FeoB, a large protein with a cytosolic N-terminal G-protein domain and a C-terminal integral inner-membrane domain containing two 'Gate' motifs which likely functions as the Fe2+ permease; and FeoC, a small protein apparently functioning as an [Fe-S]-dependent transcriptional repressor. Feo allows the bacterial cell to acquire iron from its environment.	4.66108e-09
NC_018012.1\|WP_041447215.1\|1756154_1757264_-\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	1.15786e-27
NC_018012.1\|WP_052314988.1\|1775857_1776052_-\|hypothetical-protein	gnl\|CDD\|238562	cd01142, TroA_e, Periplasmic binding protein TroA_e. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	4.22194e-06
NC_018012.1\|WP_052314986.1\|1753770_1756242_+\|DUF3604-domain-containing-protein	gnl\|CDD\|371976	pfam12228, DUF3604, Protein of unknown function (DUF3604). This family of proteins is found in bacteria. Proteins in this family are typically between 621 and 693 amino acids in length.	3.5946e-168
NC_018012.1\|WP_157174401.1\|1772573_1774901_+\|Fe(2+)-transporter-permease-subunit-FeoB	gnl\|CDD\|236563	PRK09554, feoB, Fe(2+) transporter permease subunit FeoB.	0
NC_018012.1\|WP_014778074.1\|1769967_1771674_-\|potassium-channel-protein	gnl\|CDD\|367001	pfam02254, TrkA_N, TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.	4.20103e-22
NC_018012.1\|WP_014778068.1\|1758378_1759374_+\|HupE/UreJ-family-protein	gnl\|CDD\|379373	pfam13795, HupE_UreJ_2, HupE / UreJ protein. These proteins contain many conserved histidines that may be involved in nickel binding.	3.05861e-55
NC_018012.1\|WP_014778072.1\|1767862_1768426_-\|hemerythrin-domain-containing-protein	gnl\|CDD\|226454	COG3945, COG3945, Uncharacterized conserved protein [Function unknown].	1.02122e-11
NC_018012.1\|WP_052314989.1\|1776048_1776378_-\|hypothetical-protein	gnl\|CDD\|238562	cd01142, TroA_e, Periplasmic binding protein TroA_e. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	3.94801e-07
NC_018012.1\|WP_052314987.1\|1757461_1758382_+\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|379040	pfam13145, Rotamase_2, PPIC-type PPIASE domain.	2.72931e-12
NC_018012.1\|WP_041447215.1\|1751135_1752245_-\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	1.15786e-27
NC_018012.1\|WP_041446892.1\|1752312_1752726_-\|DUF4158-domain-containing-protein	gnl\|CDD\|379339	pfam13700, DUF4158, Domain of unknown function (DUF4158). The exact function of this domain is not clear, but it frequently occurs as an N-terminal region of transposase 3 or IS3 family of insertion elements.	1.98258e-08
NC_018012.1\|WP_014778071.1\|1766744_1767866_-\|ferrochelatase	gnl\|CDD\|234585	PRK00035, hemH, ferrochelatase; Reviewed.	2.4992e-164

>NC_018012.1|WP_014778069.1|1759761_1760199_-|hypothetical-protein
MSEVQETAAEPAIVQALLRLPPAEQQRLLEWSRGLGAIRDGTLRGGKKAVAMLALTRDRKAAWPLVKLLSLALKHGVWDARSWALRLGIGSIVATFLVVGNAGAGLVAVGGGVRLPLWLLVGAGGVLIGLLADTLKAQRKRHRQS
>NC_018012.1|WP_014778068.1|1758378_1759374_+|HupE/UreJ-family-protein
MTPLRLLLAVTLVWMLGAASTVFAHPLDPALLDIRESPTGTLEVLWRWPMSQTVGGPLEAILPDACKPLSAPEVSHSGSRVTLRWRAQCGEGSLVGDRIGVAGLRERQTDALLRLHLSDGRLIQAVLRGDAPAVTVPERSGRFDVLRDYARLGFEHILSGPDHLLFVLGLVLLVQGWQRLIWTVTAFTAGHSVTLALAVLGVVTIPPQPVEILIALTILVVAVELTGGERETWIQRFPWAMAFTFGLLHGLGFAGALTQVGLPGDEVPLALLAFNVGIELGQLLCVVAILAVRTSLVRVPVCWPTSAARFPAYVIGSLAIFWVIERTAAMF
>NC_018012.1|WP_052314987.1|1757461_1758382_+|peptidyl-prolyl-cis-trans-isomerase
MPEQPPAQREPVVISAARIETMQADFTQRWGTRPTPEQLSALIAQAVDEELLYREARLLALDFEDSSVRRRLVEKMRAVSDRPGRSPDELVREAHALGLDDDIVIRRLLMEKMRLVLAQDPMAPPLTETDLRDYLHRHRDRFEQPAELTFSHIFLSKSAHGADLEGDAQTMLTQLRARSTPLSVALEWSDPFLLGQQIRAYSQNRLTARFGKSFAEQVFTLQPGNWSPPIASPYGLHLVWVEEKTAPRLPDLATVWRQVAEGAQKARADAQLAQGMTALRKRYEIRIDGRTDPSARATALTSPLRP
>NC_018012.1|WP_041447215.1|1756154_1757264_-|IS5-family-transposase
MSKAGRPPKIHEAEQAVLRQIVTDRPTSTLSEIARELAARTGIEAHEATIRKSLREAGVTRLRGESGLEAQARATPRRYGYTDAHRRHDPDQSYPSCLTDAEWDLVAALFEMPGGRGQPPRVSRRSILEACCYVVRTGCAWRMLPHDFAPWQNVYKTFRRWSAAGKFEQMHDRLRGQWREREGREIAPTAAVLDAQSTRGSPQGGPSGFDAGKQVKGRKRSLVVDTLGFVLAVSVVAANLQDRDAASGAVADAAAKYPQINTLFVDSAYAGQFAQTTEQTHAIRVEVVRHPANKSVGSWHVDGAPDRVVIANADGFVPLPKRWVVERTHAWNERARRLIMHHDRLPAVSETWVWLAEARILLRRLTTTV
>NC_018012.1|WP_052314986.1|1753770_1756242_+|DUF3604-domain-containing-protein
MATKQPFFGETHLHTAYSFDAVALDTRNTPADAYWYAKGGQVGLPPWADTRTAEDTPPLSQSTLVTEHPYCMPGEHCQFMATRTIQFPEGRALDFAAITDHAEQFGESNICTFEATQTCTSDGDCNPVVTGQACSSDSLCRPSGYDSATCIAARDEFSRIRQGAVASVMAGFENVSQNPSRPPFCGPDGSLCTRQAKLVWDRIRADAEEAYDRTSACTFTSFVAYEYTAMAANGRCADALALPCWDAAQNNAYPDVPDSSAPSADCPSGAACIMNFTGNSGADNLHRNVIFRNNDVLDQPISNVERPLGCGFGAACTSTPDSPVASPAVMLQALKDACIDNPAKPRCDVLTIPHNPNMSRGSLFILPDNTSDGLTEAKLRHQLEPLVEIMQIKGQSECRYNARTGMAWTNPPDELCDFENQGWARLGGSADGYLTDAMQTTDSIPPRSYVRNTLANGIAYAARNGVNPFQLGFVGALDNHNGTPGQTDAQQYAKSGAHGIQSFATSAEALNERFFLGLETNAGGLAVVWAEENSRDAIFTALRNRETYATSGTRPIVRVFGGFGLPADICTRGDFAARGYANGVPMGGTLRGTSGGRAPRFAISALMDPGWSGHPGTPLQRAQIVKGWVDAAGQTHEAVYDVAGAGDVQNVDDMVDLRTCQPKGVGLTDFCTLWTDPGFDPALHAFYYVRVLENPSCRWNQYYCNARGVDCSQHMGTCRGEGSSFDGLGCDSETDCGDAVCTLPDSYEEYEYTQCCSGIVPQTVQQRAWTSPIWYVPARRWPPIPSRDLRGCRQNQTVVVNRRSRMRASASQTQVSETAGRRS
>NC_018012.1|WP_157174397.1|1752866_1753460_+|recombinase-family-protein
MMKQVAIYARVSTDEQTPDNQLRELRAVAERMGWQIVEEFVDHGISGVKGRDRRPAYDRLYRAILRREIDLLMAWSVDRLGRSLQQLVALLSDLQAKDVDLYLHQQGIDTTTPAGTAMFQMCGVFAQFERAMIQERVKAGLERARAQGKRLGRPRVPERVEQAILAARQQGKGIKKIAAELGVGVSTVQRVVHEPAP
>NC_018012.1|WP_041446892.1|1752312_1752726_-|DUF4158-domain-containing-protein
MASIDRTAYPRCSHQLSDQEMDARDGPTDEETTLTLAESLGASARLTFLVMLKTRQQLGYLPLLDEVPEQIVGFLRNALDVPIETALLDARVKTKTLFRYRGLTRTHLGNRRFGEGSEQLLEALGGAGCGCRSQTLP
>NC_018012.1|WP_041447215.1|1751135_1752245_-|IS5-family-transposase
MSKAGRPPKIHEAEQAVLRQIVTDRPTSTLSEIARELAARTGIEAHEATIRKSLREAGVTRLRGESGLEAQARATPRRYGYTDAHRRHDPDQSYPSCLTDAEWDLVAALFEMPGGRGQPPRVSRRSILEACCYVVRTGCAWRMLPHDFAPWQNVYKTFRRWSAAGKFEQMHDRLRGQWREREGREIAPTAAVLDAQSTRGSPQGGPSGFDAGKQVKGRKRSLVVDTLGFVLAVSVVAANLQDRDAASGAVADAAAKYPQINTLFVDSAYAGQFAQTTEQTHAIRVEVVRHPANKSVGSWHVDGAPDRVVIANADGFVPLPKRWVVERTHAWNERARRLIMHHDRLPAVSETWVWLAEARILLRRLTTTV
>NC_018012.1|WP_041446891.1|1750619_1750877_-|hypothetical-protein
MEESLIGVLGQLLNQAKDDCNDQDLGLRMRQILDAEGAVERLGAQVESVSADHQGNDLPLLWPFHADHRSVLFRVLELIGPAPTT
>NC_018012.1|WP_157174396.1|1750433_1750610_-|hypothetical-protein
MIDAWRDVLQHRRTRRATLPREINLDFLSQRWAAFVETRDAHENPALDHRALEVCIFT
>NC_018012.1|WP_157174400.1|1766306_1766444_+|hypothetical-protein
MLLGRERGRFPRVQIVENLETKNLDIFVQQHQKPLGFGFAVGDRR
>NC_018012.1|WP_014778071.1|1766744_1767866_-|ferrochelatase
MTFVNTPDYRHDTPECLGILLTNLGTPDTPSVPDVRRYLAEFLWDPRVVEMARLPWWLILHGVILRTRPARSAKAYQSVWTADGSPLLAIARRQATALQGLLSDRFQGSVKVALGMRYGNPSISSALAELRQANARRVLVFPLYPQYSGSTVGSAFDAIAHELTRWRWLPELRFINQYHDEPGYIDALAASIRDHWAAHGEPERLLFSFHGIPVEYFEQGDPYHCQCQKTARLVAERLELAPERWFLSFQSRLGKQEWLKPYTDVTLKDWGAAGVKSVQVLSPGFSADCLETIEEIDEENRHLFLDAGGRDYSYIPCLNDRPDHLEMLADLIARHGCGWPELIGPAAGADELARRVERARGMGAADQTSTSGF
>NC_018012.1|WP_014778072.1|1767862_1768426_-|hemerythrin-domain-containing-protein
MHALMQRLTQDHARQKKLLALFDSLLDRFHEGAEPDYDLMNEMLEYLDSYADIVHHPTEDLVFQRVLDKGVAQADLFELLMRQHPGLSQVGKRFRQSLNGILNEEVLLREDVEADGRELVASMRTHMMMEDGDAYPLALQTLDDGDWESIAAQAPTVEDPLFGTPDPVRFRALYRYLSEQAEPETTG
>NC_018012.1|WP_014778074.1|1769967_1771674_-|potassium-channel-protein
MDTIIFLILRRMRAPLLTLIVVYALAMAVLALIPAQDEAGRPATMSLFHAFYFVSYMSTTIGFGELPNAFTDAQRLWVSLSVFSTVAVWIYAIGKLIALLQDNAFQRAILERRFRNRVRRMHAPFYLVCGYGQTGGALVRAFTDRHRHAVVVDIDPDRINLLQLDNHREYVPALCADARSPSTLEAAGLKHPMCQGVVALTNVNEANLKIAIAAKLLRPKVKVICRADSHEIEANMASFGTDHIYDPFDIFALYIAVAIQAPCLTLLFNWLSGAGDEALTEPFYPPAQGHWIICGYGRFGKAMYKYLKEQGLTITVIEAAPHKTGIPAEGVVHGRGTEAVTLEQADIGRAVGLVAGTDHDADNLSIVMTALTLKPDLFVIARENHLDNQELFDRVGAHAIMHPSAIIANRIRVRLVNPLLADFSNLARFQEETWACELVSRIVALVDERMPYVWEFGIDAKQTPALCEAEDRGLSVTLETLLRDPRERANRLPALPLLLVRNEEFILLPGPEERLGEGDRLLFCGREEARWRMDWLLRNIHALRYVATGQSQREGGVWRWIAAWKRSR
>NC_018012.1|WP_014778075.1|1771686_1772070_-|hypothetical-protein
MNPEKVVFGFFIVLALTLNFGFFVGEIDNPDHHHAWELFAVVVVNLIATILKFGDRTQIGAVLIATSLVAMLQLLAASLVWTIAVHVTEAGMTPSVMASIVSLAGGAMIANVVSVILLMIETLMLRR
>NC_018012.1|WP_014778076.1|1772230_1772560_+|ferrous-iron-transport-protein-A
MPQPADLIRLTELPHDTPARLAEIRGGRHLTRRLMALGLRQGSLLQVLQQRGQGLVLASGEARIAVGTGIADKLWVALGAAPTEDDPARLSALRDGAADPNPVDTQPGQ
>NC_018012.1|WP_157174401.1|1772573_1774901_+|Fe(2+)-transporter-permease-subunit-FeoB
MDSKRPDSSVAPRPLTVALGGNPNCGKSALFNALTGIRQTTGNWPGVTVERKEGALELDGRRVRVIDLPGIYSLDANSLDEVVTRDYLLSREADLIVNVVDAGNLERNLYLSVQLLEMGVPIVVALNMMDVARKRGMRIDAGQLSDALGCPVVPVVAVTKEGLTELQARLLAVAEGREPAGLALAHGDCVEEAVADLLPLLTEVPERANARWLALKLLESDPVAEQSVGAEALARAAECRHQIAERTGEDADLHIADTRFGHAHMLCQRVSRQSNRVGRTLSDRIDQVVLSRSFGIPLFLLMIYLMFMFTMNIGGAFIDFFDLAGQALFVDGFGVLLGNLDAPDWLILVLADGIGGGLQVVGTFVPIIASLYIVLSILEDSGYMARAAFVMDRFMRSIGLPGKAFVPLIVGFGCNVPAVMATRTLENERERKLTILMNPFMSCGARLPVYALFAAAFFPHSGQNLVFALYLTGIAVALLSGLAMKHTLLKGESAGLLMELPPYHLPTVKGVLLRTWDRVKLFLREAGKVIVLMVLVLNVLDTVGSDLSLGNQDSDRSILAAASRAATPLFAPMGIREDNWPAVLGVFSGVLAKEVIVGTLDSLYSRLAAEDAPPLEPEPFDLWRDLGRAGASVGENLGALGARLLDPLGLDVGDVSDTETAAAQQGVQRGTFGAMAARFDGQAGAFAYLLFVLLYFPCVATIGAIVRESGTAWAVFVGFWTTGIAFLTATLFYQAAIFERAPLTASLWIGGGLALFAGVLIALRLWAREAPAPAR
>NC_018012.1|WP_014778078.1|1774955_1775183_-|hypothetical-protein
MPSLDMLTACCHLLEGICLATDLSQRSEAPDLDLYRRAALAGFEDDAISEGASVISLGIEPDEIVYAAGGARAWR
>NC_018012.1|WP_052314988.1|1775857_1776052_-|hypothetical-protein
MKTAARLLGQALGSAVSARAETFVRDCDDNLRRVAERLADLPESARPGVYYVSISRSRPRAATP
>NC_018012.1|WP_052314989.1|1776048_1776378_-|hypothetical-protein
MTTPRLFVRGFGAILIVLTMVLFLLRVGTSETPESLPGTPGRTLVDQAGQILHLSEPVQRIGTPGISMASLILAIGGGDSLQAVAPEVRDNPKPSASRCSIWATPIPRR

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Crispr_ID: NC_018012_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018012_7

1782233-1782359

Orphan

Consensus_repeat	Method
CGCGGAGGAGGAGTGCAGAAATTCCTCCTAGAGCAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018012_7

>merge|NC_018012|7|1782233-1782359|CRISPRCasFinder
CGCGGAGGAGGAGTGCAGAAATTCCTCCTAGAGCAGCCATTCCAATGCCAGAGAAAAGCCATTCCTTAGCATCGTGGAATTTGCGCCAGACGCGGAGGAGGAGTGCAGAAATTCCTCCTAGAGCAGC

>NC_018012|7|7|1782233-1782359|CRISPRCasFinder
CGCGGAGGAGGAGTGCAGAAATTCCTCCTAGAGCAGC	CATTCCAATGCCAGAGAAAAGCCATTCCTTAGCATCGTGGAATTTGCGCCAGA
CGCGGAGGAGGAGTGCAGAAATTCCTCCTAGAGCAGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_018012.1\|WP_014778083.1\|1779670_1779949_+\|type-II-toxin-antitoxin-system-YafQ-family-toxin	unknown	unknown	gnl\|CDD\|225583
NC_018012.1\|WP_014778090.1\|1786446_1786893_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014778094.1\|1794083_1794956_+\|DUF4435-domain-containing-protein	unknown	unknown	gnl\|CDD\|373095
NC_018012.1\|WP_157174403.1\|1780153_1780354_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_052314988.1\|1775857_1776052_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238562
NC_018012.1\|WP_014778092.1\|1789027_1791814_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NC_018012.1\|WP_014778089.1\|1785897_1786365_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NC_018012.1\|WP_041446895.1\|1777873_1778326_+\|Cd(II)/Pb(II)-responsive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133411
NC_018012.1\|WP_052314990.1\|1792003_1792216_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014778085.1\|1783297_1783558_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|198034
NC_018012.1\|WP_052314989.1\|1776048_1776378_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238562
NC_018012.1\|WP_014776993.1\|1780337_1781522_-\|ISAs1-family-transposase	unknown	unknown	gnl\|CDD\|379382
NC_018012.1\|WP_014778087.1\|1784463_1784970_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|225998
NC_018012.1\|WP_014778091.1\|1787787_1788999_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014778081.1\|1778491_1779223_+\|serine-O-acetyltransferase	unknown	unknown	gnl\|CDD\|200082
NC_018012.1\|WP_014778082.1\|1779404_1779674_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|376852
NC_018012.1\|WP_014778093.1\|1792722_1794087_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379114
NC_018012.1\|WP_014778086.1\|1783706_1784426_-\|nitrogenase	unknown	unknown	gnl\|CDD\|378213
NC_018012.1\|WP_014778079.1\|1776831_1777578_-\|cation-transporter	unknown	unknown	gnl\|CDD\|224151
NC_018012.1\|WP_014778078.1\|1774955_1775183_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_018012.1\|WP_014778083.1\|1779670_1779949_+\|type-II-toxin-antitoxin-system-YafQ-family-toxin	gnl\|CDD\|225583	COG3041, COG3041, Uncharacterized protein conserved in bacteria [Function unknown].	9.75311e-07
NC_018012.1\|WP_014778094.1\|1794083_1794956_+\|DUF4435-domain-containing-protein	gnl\|CDD\|373095	pfam14491, DUF4435, Protein of unknown function (DUF4435). This presumed domain is functionally uncharacterized. This domain is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 285 and 362 amino acids in length. This domain is sometimes associated with AAA domains.	3.06993e-14
NC_018012.1\|WP_052314988.1\|1775857_1776052_-\|hypothetical-protein	gnl\|CDD\|238562	cd01142, TroA_e, Periplasmic binding protein TroA_e. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	4.22194e-06
NC_018012.1\|WP_014778092.1\|1789027_1791814_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.16905e-15
NC_018012.1\|WP_014778089.1\|1785897_1786365_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	2.4172e-16
NC_018012.1\|WP_041446895.1\|1777873_1778326_+\|Cd(II)/Pb(II)-responsive-transcriptional-regulator	gnl\|CDD\|133411	cd04784, HTH_CadR-PbrR, Helix-Turn-Helix DNA binding domain of the CadR and PbrR transcription regulators. Helix-turn-helix (HTH) CadR and PbrR transcription regulators including Pseudomonas aeruginosa CadR and Ralstonia metallidurans PbrR that regulate expression of the cadmium and lead resistance operons, respectively. These proteins are comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the C-terminal domains have three conserved cysteines which form a putative metal binding site. Some members in this group have a histidine-rich C-terminal extension. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	7.70702e-62
NC_018012.1\|WP_014778093.1\|1792722_1794087_+\|ATP-binding-protein	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	4.63727e-10
NC_018012.1\|WP_014778085.1\|1783297_1783558_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|198034	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain. This domain is found in AbrB from Bacillus subtilis. The product of the abrB gene is an ambiactive repressor and activator of the transcription of genes expressed during the transition state between vegetative growth and the onset of stationary phase and sporulation. AbrB is thought to interact directly with the transcription initiation regions of genes under its control. AbrB contains a helix-turn-helix structure, but this domain ends before the helix-turn-helix begins. The product of the B. subtilis gene spoVT is another member of this family and is also a transcriptional regulator. DNA-binding activity in this AbrB homologue requires hexamerisation. Another family member has been isolated from the Sulfolobus solfataricus and has been identified as a homologue of bacterial repressor-like proteins. The Escherichia coli family member SohA or Prl1F appears to be bifunctional and is able to regulate its own expression as well as relieve the export block imposed by high-level synthesis of beta-galactosidase hybrid proteins.	1.6003e-09
NC_018012.1\|WP_052314989.1\|1776048_1776378_-\|hypothetical-protein	gnl\|CDD\|238562	cd01142, TroA_e, Periplasmic binding protein TroA_e. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	3.94801e-07
NC_018012.1\|WP_014776993.1\|1780337_1781522_-\|ISAs1-family-transposase	gnl\|CDD\|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	3.97845e-35
NC_018012.1\|WP_014778087.1\|1784463_1784970_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|225998	COG3467, COG3467, Predicted flavin-nucleotide-binding protein [General function prediction only].	9.7766e-31
NC_018012.1\|WP_014778081.1\|1778491_1779223_+\|serine-O-acetyltransferase	gnl\|CDD\|200082	TIGR01172, Serine_acetyltransferase, serine O-acetyltransferase. Cysteine biosynthesis [Amino acid biosynthesis, Serine family].	3.67749e-85
NC_018012.1\|WP_014778082.1\|1779404_1779674_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	0.000121295
NC_018012.1\|WP_014778086.1\|1783706_1784426_-\|nitrogenase	gnl\|CDD\|378213	pfam09582, AnfO_nitrog, Iron only nitrogenase protein AnfO (AnfO_nitrog). Proteins in this entry include Anf1 from Rhodobacter capsulatus (Rhodopseudomonas capsulata) and AnfO from Azotobacter vinelandii. They are found exclusively in species which contain the iron-only nitrogenase, and are encoded immediately downstream of the structural genes for the nitrogenase enzyme in these species.	1.1909e-45
NC_018012.1\|WP_014778079.1\|1776831_1777578_-\|cation-transporter	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	7.57788e-36

>NC_018012.1|WP_014776993.1|1780337_1781522_-|ISAs1-family-transposase
MCDLSVERSIAHHFAPLDEPRSAIQRRHLLSEMIVITIAASFSGADGWVGVETFGQAKEAWLRTFLKLPAGIPSHDTFGRVFALIDPAQFAACFRQWSASVAELIPEEIIAVDGKTLRRSHSRGKGLAALHLVSAWATANRVVLGQVATDAKSNEITAIPRLLEWLKLEGCIVTIDAMGCQTKIAAQIIHQGGDYVLALKGNQETLAAEVEEAFIDADARGYAGVDSAFLETVERGHGRLETRRYQTLGDLSGVPHSASWEAMNMIGMVESRREVAGKVSVETRYFIGSIGTSAARFAHAVRGHWGIENGLHWNLDIAFREDECRVRDPVARENLAVLRHLALSRLKNDGTKLGIQNKRLKAGWDESYLSKLLFESPQRKGDADTSVPANVSSA
>NC_018012.1|WP_157174403.1|1780153_1780354_-|hypothetical-protein
MLAALDAIALAVEAGKAVIPVLLPSATSKPTLPAFLSNRTWVEFKTSFDESGIQKLIWGITGQKQK
>NC_018012.1|WP_014778083.1|1779670_1779949_+|type-II-toxin-antitoxin-system-YafQ-family-toxin
MSFALVTTQHFERQARKFLRKHPDLRPTLRDTLNDLSRDPFEPKLKLHALAGKLEGMQAVSLTYSYRLTLLLRVTEGEIVLLDIGTHDEVYG
>NC_018012.1|WP_014778082.1|1779404_1779674_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MNSIPAQEIKRRGISAVDDALNSGPVHIIKNNRPSYVVLTEAAYAELQEAQQEAARARLRASLADLEAGRTHRYADADALMRALDTDEV
>NC_018012.1|WP_014778081.1|1778491_1779223_+|serine-O-acetyltransferase
MNAINEPVPQPRRRPGVWATIAEDVDCIFDRDPAARTRFEVYTTYPGVHAVILYRLAHPLWHHGWRWLPRFISYLARIWTSIDIHPGATIGQRFFIDHGAGVVIGETAEVGDDVTLYHGVTLGGTSWHKGKRHPTLGNGCVVGAGTKILGPVKLGEHVKVGANSVVIGDVPANSTVVGIPAKIVRSRRSLSLTPHGIDLDHHLIPDPVAGAIACLLERIRHLEQEVGIHGCLLHGTTRHDTGR
>NC_018012.1|WP_041446895.1|1777873_1778326_+|Cd(II)/Pb(II)-responsive-transcriptional-regulator
MRIGELAAAAGVDVETIRYYERLGLLPAPPRRSNGYRTYARDHLERLAFIRHCRALGMSLADVQRLLDLLAHPEADCHDANCLIDAQLERVRERLQAMQMLERQLSALRTRCRSQHTADTCGILHELVAAAQGEGCICHPGGSAPTGAGD
>NC_018012.1|WP_014778079.1|1776831_1777578_-|cation-transporter
MGIGCCGSSCSTHQAVSPRFRQALWIALVINGVMFGVEILGGLHAGSVSLLADAVDFAGDAANYGLSLAVLSMGLAWRSRAALVKGLSMTAFGVFVIGRTTWSAFAGVPPEPLTMSLIAVLALLANASVAFILYAYREGDANQRSVWLCSRNDAIGNLAVLFAAAGVFGTGSAWPDLIVALAMAGLAISAGLTVIRQAHGELRTLRPMLIAKSPQRVLVQMPMPASTSADSEVQHTILANIREHPLHH
>NC_018012.1|WP_052314989.1|1776048_1776378_-|hypothetical-protein
MTTPRLFVRGFGAILIVLTMVLFLLRVGTSETPESLPGTPGRTLVDQAGQILHLSEPVQRIGTPGISMASLILAIGGGDSLQAVAPEVRDNPKPSASRCSIWATPIPRR
>NC_018012.1|WP_052314988.1|1775857_1776052_-|hypothetical-protein
MKTAARLLGQALGSAVSARAETFVRDCDDNLRRVAERLADLPESARPGVYYVSISRSRPRAATP
>NC_018012.1|WP_014778078.1|1774955_1775183_-|hypothetical-protein
MPSLDMLTACCHLLEGICLATDLSQRSEAPDLDLYRRAALAGFEDDAISEGASVISLGIEPDEIVYAAGGARAWR
>NC_018012.1|WP_014778085.1|1783297_1783558_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MSIVTVSHKGQAVIPAAIRRRLGIEPGTKLDFELEGDSIRVRPHRTIQRSRPEDGYGLLKCDQPGIRRLADFDVALSMREIGDDRP
>NC_018012.1|WP_014778086.1|1783706_1784426_-|nitrogenase
MKIAACIDSQGAPLSPQEPGILRLFAHEDGGWRHVSGTAFDGITARSIAEITQQAERLGALLDGAEALLVRDVKGIVVTLLQNLGLRLWRLDGPPEAALDAVRRELEAAARELPDPARFFESGETEGEYRIDLAAVLASDSSLNSQLVLVPFMQQIPFSRLEVVCDHPPRWLDKQLPAAGFDWEDASQDGVCRLIIRPSGESIGMPPRGGGCGKHGTWPAVGGVVGVDARSGRPDASGP
>NC_018012.1|WP_014778087.1|1784463_1784970_-|pyridoxamine-5'-phosphate-oxidase-family-protein
MTATEPQSAPHPHGAMRRSDREITDRAAIDAIIRSARVMYLALAEADAPFVVPVFYAYDGTSLYLHSAKSGSKIRILKRNPRACFAISTDHGVIESQQACDFEAKHRTVIGMGQAHFVTDEAERIAILDRIVARFTDQHFEYPKTNLDATAVIRIDIESIKGKSHGFG
>NC_018012.1|WP_014778089.1|1785897_1786365_-|winged-helix-turn-helix-transcriptional-regulator
MEFITDQSAGYLANHLARLFARQLQGRIKPLGLTTGTFPALLVLWEGDGLTQRELIDRLDIEQPTLANTLARMERDGLIVRKKDAADARAQRIWLTDQARALRAPAIAAAVQVNNDALAVLTEAGRDQFIALMRRVIAGMQEPAIDDAEDRREAG
>NC_018012.1|WP_014778090.1|1786446_1786893_+|hypothetical-protein
MSKAFHPITGALALLTILTFWVSTLVSEVFGSPTTVVAVKTFIPWGFLLLVPALMATGGSGFALARQRSDRLVDVKRRRMPVIAMNGLLILMPAALFLAFKVQAGELDAVFYAVQVLELVAGAVNIALLGLNMRDGLRVTGRLRHAPA
>NC_018012.1|WP_014778091.1|1787787_1788999_+|hypothetical-protein
MKANPGGQIDLAEVVGRDQLIERIWDTLEQQSIRMTAERRIGKTTIIRKLCAEPRPGWVPIFQDLERYHSAREFALSVYQEVDRFLSRHKRFARRSKDLLKTLGGTEVGGVLKLPEMTADAPWQDILTVAIQDLVEERERLDARPLFLWDEVPYMLASIKAREGEPVAMAVLDSLRALRQTHGAAGLRMVLTGSIGLHHVIAGLKRHNYANSPLNDTYPLEVPPLDADPARELAARLIEGERIRADCPSETAAAVARLADGFPFYIHHLVKALKQAALTSATGADPALVEQVVAQQLLDPNDPWELSHYRERIPVYYGQDSEQAVLGILDGIAARAEDATPVALSINALLAEGRAAGTLDDRDRLIDLLRLMEQDHYLSRDVAGGYRFRFPLLQRWWRLARGL
>NC_018012.1|WP_014778092.1|1789027_1791814_+|tetratricopeptide-repeat-protein
MKDRVFLSVFTPSRTAPEDLEAITVQRQALLADAVERVHESATTGNKHHLLFVGPRGTGKTHLVTLLVHRLGRDRTLDERLRIAWLNKDETSTSLLELLRRIYEALSKRYPDEFTPDALEPLFDLTPEDAENALAQLLLKTLRDRTLLVVVENLDALFEGLGQTGQQKLRAFIQEHPVLSMVTTAQRLVDDIARRQSAFFGFFQTEHLKPLSVEQARELLRNIARLNGQTDVIAFLDSATGRSRIRALHHLSGGNHRLYIVLSQFITRDSIQALVDPFAKMVDEMTPYYQERIRWLPAQQRKIVEFLCAQDRPIPVKQIARRLFATQQTISSQLKDLRGKGYVQSAQRGRESLYEIAEPMMRICVEIKENQTQGPLRVLVDFLRVWYDGRELNARLSDDRTDCMARVYLASAIEANQAQGNLRARLLVDGFNAELDEAGRAQWGGRIKGYAEECEELALACGHWAKGEDTEALRILKEIIDEDRGRSTAVKLSSLDLAAEIHHKKGEYLLAINLLNTLLAEPEAPVEQVARALINRGTNYWQLENFDKAISDYNAAIKLPQAHVEEVASALVNRGTTYGQLGNHEKAIADFSAVIELKQAPVEQVAWALVNRGVAYRMLGDIDKAIADDSAAIELPQPPVEWVAKALVDRGLIYGQIGDSDKANADFTTVIKLEQAPAEEVAWALVTRGLTYRLIGDIGKAIADFSAAIELPQAPIEQVALAFRNLGLAYWLQSDSTRSETNLEALLRLKGAPLRERIDAHLALAEIRIFTGRWDEAIAALGDGLREGATAAPAYQGDSTDIIAAFFDSTLQPVIRRERTRSLFEVYRDADAITQLGEALTRHLGRLHANTEKPPSPDNLETWATAWEEAGKDIDAFRLPLRLFRTGIDFLKAGGTDPGILLDLNQEERKLLEQVFDLESSPEALRAG
>NC_018012.1|WP_052314990.1|1792003_1792216_+|hypothetical-protein
MAGEQGAATLGKHLSATKVLADPVGAIAGFYTLATAQVDFADLPPELCRRQPRRNLPIAVLAWMGIREGD
>NC_018012.1|WP_014778093.1|1792722_1794087_+|ATP-binding-protein
MTDPQLLRVRSIQVDRLFDLFDHRVDLKLEERVTILHGPNGVGKTMLLRMVNALLDGRYSLFQQVPFRRFVLELTDDSKVELTLGPKKASRDKRNQDKARLLHLTYFHKGKEVEPYEVPANKDVVSMADAIAARIPWVNRAGDGVWTDERAGMELLAAEEIVARYRDEVPIRLLPDPGLADPVWLKELRDKVNVHLIAAQRLLRVTNDDPRRYRTGPRTIFTVLDYARDVQVRINDTMARYGQQSQSLDQSFPQRLLNSRTAMLPAETLKQRMEKLDARRADLKEIGLLDEPGSNPFDTAALSTLDPAQQSVMALYVEDTEQKLSVLDDLARRARLLLDNVNRKFHHKHIRIDRELGLVAEGEQGRPLALDALSSGEQHELVLHYDLLFRVRPNTLVLIDEPELSLHVAWQKRFLPDLLEIVETAQFDVLMATHSPFIVGDRSDLMIGLDAHLV
>NC_018012.1|WP_014778094.1|1794083_1794956_+|DUF4435-domain-containing-protein
MNLTAYKSSGDIEAEVLMMSQVHTGSFLVVEGVDDIRFWTSRVADGACELVDGNGKPNVEGALTRLDSRSFSGVLGIVDDDCDGLDCRPLPSPNLIATDAHDLECVLLRSPALDRVLGEFGSRAKIRKFEQTQGVEVRNALVSRGIQLGRLRWLSRRAGWPYPFGDKGPARFVDQATWTVDTARLEADVVASGAYPSVADLRAALGNLPTDDPWSICQGHDLVAVLGIGLRKVLGNLKAGTGVDYIASLLRSAYDDIDLERGHLGVSIRAWEQANTPYRLLRRNPASVES

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Crispr_ID: NC_018012_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018012_8

1942936-1943045

Orphan

Consensus_repeat	Method
CTTAGAGTGCTATCGGAAAACTAGGAGCGTAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018012_8

>merge|NC_018012|8|1942936-1943045|CRISPRCasFinder
CTTAGAGTGCTATCGGAAAACTAGGAGCGTATGACTTGGGTGCGGATCGGCAATGCCGACGCCTGGGTTCTACGCTGGCTTAGAGTGCTATTGGAAAACTAGGAGCGTAT

>NC_018012|8|8|1942936-1943045|CRISPRCasFinder
CTTAGAGTGCTATCGGAAAACTAGGAGCGTAT	GACTTGGGTGCGGATCGGCAATGCCGACGCCTGGGTTCTACGCTGG
CTTAGAGTGCTATTGGAAAACTAGGAGCGTAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_018012.1\|WP_014778218.1\|1946427_1947807_+\|V-type-ATP-synthase-subunit-B	unknown	unknown	gnl\|CDD\|235251
NC_018012.1\|WP_169315596.1\|1950089_1950941_-\|tol-pal-system-protein-YbgF	unknown	unknown	gnl\|CDD\|188247
NC_018012.1\|WP_014778208.1\|1935499_1936555_+\|V-type-ATPase-subunit	unknown	unknown	gnl\|CDD\|376708
NC_018012.1\|WP_014778223.1\|1950968_1951517_-\|peptidoglycan-associated-lipoprotein-Pal	unknown	unknown	gnl\|CDD\|274307
NC_018012.1\|WP_014778214.1\|1941891_1942122_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_041447445.1\|1947929_1948226_+\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|223799
NC_018012.1\|WP_014778215.1\|1942371_1942557_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014778220.1\|1948246_1948891_+\|V-type-ATP-synthase-subunit-D	unknown	unknown	gnl\|CDD\|376621
NC_018012.1\|WP_014778209.1\|1936614_1938510_+\|ATPase	unknown	unknown	gnl\|CDD\|235600
NC_018012.1\|WP_014778207.1\|1935110_1935428_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014778217.1\|1946026_1946239_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_041446903.1\|1949806_1950085_-\|DUF3018-family-protein	unknown	unknown	gnl\|CDD\|371540
NC_018012.1\|WP_014778216.1\|1942544_1942844_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NC_018012.1\|WP_014778213.1\|1940025_1941858_+\|V-type-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|235248
NC_018012.1\|WP_014778221.1\|1949058_1949769_-\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153212
NC_018012.1\|WP_014778211.1\|1939002_1939374_+\|ATPase	unknown	unknown	gnl\|CDD\|376707
NC_018012.1\|WP_014778210.1\|1938542_1938992_+\|ATPase	unknown	unknown	gnl\|CDD\|349413
NC_018012.1\|WP_014778224.1\|1951794_1953105_-\|Tol-Pal-system-beta-propeller-repeat-protein-TolB	unknown	unknown	gnl\|CDD\|179892
NC_018012.1\|WP_014778212.1\|1939370_1940018_+\|ATPase	unknown	unknown	gnl\|CDD\|167649
NC_018012.1\|WP_157174412.1\|1945093_1945546_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_018012.1\|WP_014778216.1\|1942544_1942844_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	6.42535e-15
NC_018012.1\|WP_014778218.1\|1946427_1947807_+\|V-type-ATP-synthase-subunit-B	gnl\|CDD\|235251	PRK04196, PRK04196, V-type ATP synthase subunit B; Provisional.	0
NC_018012.1\|WP_169315596.1\|1950089_1950941_-\|tol-pal-system-protein-YbgF	gnl\|CDD\|188247	TIGR02795, Uncharacterized_protein_in_oprL_3'region, tol-pal system protein YbgF. Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction.	4.57039e-39
NC_018012.1\|WP_014778208.1\|1935499_1936555_+\|V-type-ATPase-subunit	gnl\|CDD\|376708	pfam01992, vATP-synt_AC39, ATP synthase (C/AC39) subunit. This family includes the AC39 subunit from vacuolar ATP synthase, and the C subunit from archaebacterial ATP synthase. The family also includes subunit C from the Sodium transporting ATP synthase from Enterococcus hirae.	5.44878e-50
NC_018012.1\|WP_014778223.1\|1950968_1951517_-\|peptidoglycan-associated-lipoprotein-Pal	gnl\|CDD\|274307	TIGR02802, Peptidoglycan-associated_lipoprotein, peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.	1.68428e-53
NC_018012.1\|WP_014778224.1\|1951794_1953105_-\|Tol-Pal-system-beta-propeller-repeat-protein-TolB	gnl\|CDD\|179892	PRK04922, tolB, Tol-Pal system beta propeller repeat protein TolB.	0
NC_018012.1\|WP_014778220.1\|1948246_1948891_+\|V-type-ATP-synthase-subunit-D	gnl\|CDD\|376621	pfam01813, ATP-synt_D, ATP synthase subunit D. This is a family of subunit D form various ATP synthases including V-type H+ transporting and Na+ dependent. Subunit D is suggested to be an integral part of the catalytic sector of the V-ATPase.	3.49837e-42
NC_018012.1\|WP_014778209.1\|1936614_1938510_+\|ATPase	gnl\|CDD\|235600	PRK05771, PRK05771, V-type ATP synthase subunit I; Validated.	7.90016e-83
NC_018012.1\|WP_014778213.1\|1940025_1941858_+\|V-type-ATP-synthase-subunit-A	gnl\|CDD\|235248	PRK04192, PRK04192, V-type ATP synthase subunit A; Provisional.	0
NC_018012.1\|WP_014778221.1\|1949058_1949769_-\|type-1-glutamine-amidotransferase	gnl\|CDD\|153212	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.	3.16397e-72
NC_018012.1\|WP_041446903.1\|1949806_1950085_-\|DUF3018-family-protein	gnl\|CDD\|371540	pfam11455, DUF3018, Protein of unknown function (DUF3018). This is a bacterial family of uncharacterized proteins.	4.6734e-12
NC_018012.1\|WP_041447445.1\|1947929_1948226_+\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|223799	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only].	8.49148e-07
NC_018012.1\|WP_014778211.1\|1939002_1939374_+\|ATPase	gnl\|CDD\|376707	pfam01990, ATP-synt_F, ATP synthase (F/14-kDa) subunit. This family includes 14-kDa subunit from vATPases, which is in the peripheral catalytic part of the complex. The family also includes archaebacterial ATP synthase subunit F.	0.00275468
NC_018012.1\|WP_014778210.1\|1938542_1938992_+\|ATPase	gnl\|CDD\|349413	cd18120, ATP-synt_Vo_Ao_c, Membrane-bound Vo/Ao complexes of V/A-type ATP synthases, subunit c. Vo/Ao-ATP synthase subunit c. The V- and A-type family of ATPases are composed of two linked multi-subunit complexes: the V1 and A1 complexes contain three copies each of the alpha and beta subunits that form the soluble catalytic core, which is involved in ATP synthesis/hydrolysis, and the Vo or Ao complex that forms the membrane-embedded proton pore. The A-ATP synthase (AoA1-ATPases) is exclusively found in archaea and functions like the F-ATP synthase. Structurally, however, the A-ATP synthase is more closely related to the V-ATP synthase (vacuolar VoV1-ATPase), which is a proton-translocating ATPase responsible for acidification of eukaryotic intracellular compartments and for ATP synthesis in archaea and some eubacteria. The V- and A-type synthases can function in both ATP synthesis and hydrolysis modes. The V1 complex consists of three A and three B subunits, two G subunits plus the C, D, E, F, and H subunits. The Vo complex consists of five different subunits: a, c, c', c'', and d. The Ao/A1 complexes are composed of nine subunits in a stoichiometry of A(3):B(3):C:D:E:F:H(2):a:c(x). ATP is synthesized on the A3:B3 hexamer and the energy released during that process is transferred to the Ao complex, which consists of the C-terminal segment of subunit a and subunit c.	3.57902e-14
NC_018012.1\|WP_014778212.1\|1939370_1940018_+\|ATPase	gnl\|CDD\|167649	PRK03963, PRK03963, V-type ATP synthase subunit E; Provisional.	5.78103e-13

>NC_018012.1|WP_014778216.1|1942544_1942844_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MAEIRWTEAAVTWLRNIYDYISENNPIAAQSVIEGIYEKTQVLERFPEIGYKYRDEPDGQVRILLYGHYRIAYLIRKESVEILGVFHGPMEIERYIKPA
>NC_018012.1|WP_014778215.1|1942371_1942557_+|hypothetical-protein
MSAVKERMADVIQNQPEDATYEEILRELAFEKMVSSGLKDSREGKTISNEEMERRISAWQK
>NC_018012.1|WP_014778214.1|1941891_1942122_+|hypothetical-protein
MSNFVICVNNEDNPASLILGKVYPVLPDMDAAAHKMVRIIDEDQSESDGYLYEASMFVNIELPEMVKRVLEHRADA
>NC_018012.1|WP_014778213.1|1940025_1941858_+|V-type-ATP-synthase-subunit-A
MSETPFSTASRVGVIRDINGPIVTIDLPGVRSGEQVKIGELGLFGEVISLNGEQAIVQTYESTDGVRPGEPAVGLGWPLSVELGPGLMGGIFDGVQRPLSKIALESGDYIRRGISVPALDRAKEWEFEPNKALEAGTKVGPGTVLGTVQETLTVLHRIMVPPGVSGDLVEIAPAGEYDIESTIARVRDHKGISHRLSMYQRWPVRKPRPYLRRDDGVSPLITGQRVIDTFFPQIKGGKGAVPGPFGAGKTVVQQQIARWSNADIVVYVGCGERGNELVDVLETFPELDDPYSGRKLMERTLLVANTSNMPVVAREASVYVGMTMAEYYRDMGYDVVMLADSTSRWAEALREVSGRLGQMPVEEGYPAYLASRLAAIYERAGRVETYDAGTGSVTLIGAVSPPGGDFSEPVTSHTKDIIETFWALSKELADARHYPSIDWVTSFSSHVHTAAQWWHKEIDPDWEKRRGTALALLARDAELSRIVNLVGPEALSSAQRWELEGASLVKEGVLQQSALDEIDTFCSPAKQYALLDLAITIYKRGEALIKLGVPVTELQRLPLLAKMRRIKSMYTSDQLDQIQEFRKEVDQAMEAIRIEYAKHGEGSVRETEKS
>NC_018012.1|WP_014778212.1|1939370_1940018_+|ATPase
MNQVEELERAILSRAERLASEFRERAGRSRDNILREAAERLRLREAREEAIAKSLAERSFRQRVQASELKMQTHLDRMRWNLVQNVERMLAERMRAFMADEPTYRAWIDRLIVEAAELIESPELIVSANAQDQRQLNARWAQIAEALPPGKTATLAPAAEAIDTLGGVLIASQDRRIRVDQTFEGRLARLQPRIQQTILERLLPGGFETGNLFTG
>NC_018012.1|WP_014778211.1|1939002_1939374_+|ATPase
MDIEHKPGASTRMLFLGEDRLADGFRLIGFETHPNPDPRDVDRILRDLQRKRETAFVVVDDAVMSQDIPHLRQVRREGGRIIVIAVPALNAPPKLASEVAARLAALFGAATLQSGQTGEREAS
>NC_018012.1|WP_014778210.1|1938542_1938992_+|ATPase
MYWLVALMSLAILGLIVSGIALEFRPALASRIRPWYRPAMGTQLIAFVGAQLGLLFMGVSDAMAQAETVHAVAPEMSIGMGLAILGVGIPTGLSTIGAGIAVGPIGAASLAAVMERPEALGRTLIFLGLAEGIAIYGLVMSILLLNRLG
>NC_018012.1|WP_014778209.1|1936614_1938510_+|ATPase
MLMPMPMKHVRLLVLTEDLPRASMALAATESFHPDTRPPEESRLDALPGREYRETFNQAQSRYAKIARLIPLDTAPDLDTIRVVDQEELSALNVWLGGLWDETSRYEEDFHRLDEKERLIKEQQAALENFSHLNIDLGMLRNKTRFLDFHVGLVPRENLRQLEGAVSLAGSILSVYMQQGDHAHVVIVGPGDKESALAPLLAAASFQTLPIPLELDRKPAELQEDFANQRLAIAAQRQALQEDLERWSKSFRDRLLAARHTLMLAEPLVTLDASLRSAGNLAHLAGWVPAPAVAELERTLRETLTHPFDLASRDPLPDERKLVPTVPLRSRLLAPFALLVNQYGIPSYGEVDPTPLFAVTFLLMFGMMFGDLGHGAVIALAALWARGRLPKFYLFGVFAGLSSMVFGLLFGSVFGYEDILPALWMSPLHDPILMLKVALGWGIGFIVVACLLGIYNRLAIGDPLGALLERHGLVNLLFYLSFLWGGYGLATTGAFGTLPALLVIGSLLTLAAFQWHHLTAPTGEKALVVAIETLDTVIVYLSNTLSFLRVSAFSLNHVALSLAIFTLAGMMGSFGHIVTVILGNVFILVLEGGIVMIQVMRLQYYEGFSRYFSGEGHAFLPLRLRQISIHK
>NC_018012.1|WP_014778208.1|1935499_1936555_+|V-type-ATPase-subunit
MSNAAAQAYLNTRVSVMSTRLLAPEQIERLPRMTLAELADHFDLSAILDEQPSVATRARAVEQSLLQILMAELQVLARPMAAAERSLMLAWGRKYALFNLKTLLRGKLYELDQQEIRIHLFDLPETIRLPHRELFRAENALELLRQLETGPYRQIARQAREVYEKHREPFALEAAIDQRYYMGMVRQIMGSDNHHLDSLRRLMGAELDRVALLWLLRFRLTYQLSPSETYYQLVPSTRLLTRERLLHLVNLDTFERILDALPPPLDTLLADSKSIGEVQQRLSSYTLLEMRAVLSRSQSAIARALAYLMLRESDLLMLFAVARGRLLQFPDATIKAAIELSAPTCATARAA
>NC_018012.1|WP_014778207.1|1935110_1935428_+|hypothetical-protein
MDDTLKRLLDAEMRAERLAKQAEEEQEHTIQQAMADTKAANDQFTARIPDLHRSFIAKAEERAEQNIAELRRRYDERHNQLRDQAEQREEEAMEAAFQILVGRER
>NC_018012.1|WP_157174412.1|1945093_1945546_+|hypothetical-protein
MTMSAGIVDLVVKDKDGNIVSDTKRERLDKQKRFASLVDNHIHSDATLDQMLKSYQKSVKDPDDELVHLYEVRDSLSKKFGSKKDAIQKLGITNAEWEEIGILANTLPLKQGRHRGKAVGALRNAATAELEKARKSVAYLIEKYLEYLEM
>NC_018012.1|WP_014778217.1|1946026_1946239_+|hypothetical-protein
MNQEYTAVVKQDGDWWIGWIEEVPGVNCQEPTRQELLQSLRITLREAIELNRQDALCAAGSEYMEEKIAV
>NC_018012.1|WP_014778218.1|1946427_1947807_+|V-type-ATP-synthase-subunit-B
MSIKEYRTAVEARGGLLVVKNTPAVAFGDRVQIEDHSGQIRNGQVIRAADNEVLILIFEGTDDLDLENTWIRFLDEPIEIALSPEILGREFNGLGVPRDGRPPVLSSLRRPVSGSAINPAARTYPREFIQTGISTIDGLNSLVRGQKLPIFSGSGLPHNRLAAQIVRQAKLKDQDSSFSIVFAAMGVSYADAKFFRDEFANSGVLRNVVMFVNLADDPPVERLTLPRTALTAAEYLAYDLDRHVLVVLTDMTNYAEALREVATAKGDVPARKGYPGYLYSDLAELYERCGRIHERHGSITMMPVVSMPSDDITHPIPDLTGYITEGQIVLSRELHNQGIYPPVHISPSLSRLMKDGIGKDDTREDHPRVAAQLYSLYARAQETRNLASIIGADELSERDRRYLSFADAFDQRFVGQGESEDRSIEATLNLAWELMSSFPRDALTRLKETDLAKHYQGSD
>NC_018012.1|WP_041447445.1|1947929_1948226_+|YkgJ-family-cysteine-cluster-protein
MDTHLPEPDPVPGITCETCDAACCRLEVLCLTETGVPRRFTTRDDWGGTVMERLDDGWCAALDRDTLRCRIYAQRPLVCREFEMGGPDCLTERGIDLR
>NC_018012.1|WP_014778220.1|1948246_1948891_+|V-type-ATP-synthase-subunit-D
MAQQLIKVPPTKNTLLKLKKQTKFLEEGHDLLERKRELLTRLVYERIGEYRQLRETAEQALAKAYGCLSITHLRMGSRGIHQAALGAEPALEVDILPRRALGVEYPAVTSERVPLKPVGLLGTDVSFDATRDHLANAAVLLARLAEVEIALHRLLEEQRKAQKRVNALKYNIIPLYRRTIHFIQSSLEEEERNTLFQVKLLRQRADNKDATAAA
>NC_018012.1|WP_014778221.1|1949058_1949769_-|type-1-glutamine-amidotransferase
MRIHALTHVPFEGPAGIADWANARGHALTLTPVYSGGALPDPAGFDWLVVMGGPMGVQDDIEYPWMVPEKRLIGEAIAAGKTVIGVCLGAQLIAAALGARVYRNPEKEIGWFPIEFTDAGQSSPIVGFLPPRIQVFHWHGDTFDLPPGAVHLARSDVCEQQVFLYDGRVLGLQCHLESTPRSVADIVANCADELLPAAYVQNAERLLAADADDYALIHGALFGILDRLVATGRSMD
>NC_018012.1|WP_041446903.1|1949806_1950085_-|DUF3018-family-protein
MSGKSAASEPEAVRGSSASPRTSSASPRTSSASPRTSSASPRTASGGPDTRRPGFALECRRQSGLAAKADLADANLLDFMDDALNDVDGWTP
>NC_018012.1|WP_169315596.1|1950089_1950941_-|tol-pal-system-protein-YbgF
MLPFLAGACLVAFQSGALAAEPSLLEGRVGRLERILENQSGSELLLQVQRLQIEMQELRGMLETQRFDIDKLQRQQRDQYLDIDSRLNASRSDPQGTAPTGSGGQQPTLPEGVIDASGGDLQPPVETVAPAPDPASQITDGPVGIPSLPQPETFGGSERDAYSAAFSLLKDRKYDEAKDAFNDLLRRYPQGEFTDNGRYWLGETYYVQRNYPAALAEFDRLVQLNPNSPKAPAAMLKIGYIQYDQQAYDQAKVSLEQVVTRYPNSTEARLARSRLERIGQGAP
>NC_018012.1|WP_014778223.1|1950968_1951517_-|peptidoglycan-associated-lipoprotein-Pal
MTRSPHHVFSWIALPCVGLIAILTLGGCSTPPQRTVSDASAAAQITAPAASEVGRSVESTRPTYAGPWEDPSNPLYRRTIYFDYDTVDIKPEFIPLMRTHATYLGTNAGRRVTLEGHTDERGTREYNLSLGDQRADAVRRFLLAEGVPPDRMSTLSYGEERPADAGHGEPSWRANRRVVIQY
>NC_018012.1|WP_014778224.1|1951794_1953105_-|Tol-Pal-system-beta-propeller-repeat-protein-TolB
MSRYQRLPLIVLAFVLSLTGVGVGSAAPRLNIEITGGVEAAQPIAIVPFGVSEGLIPPVDIAAVISADLARTGKFKPMPTRDMLDMPTTREAVDLRDWSLLGMNSLVIGQIDPEGTGFRISFSLYDVLGGNELASTSLVGSKTGLRHTAHLIADLIYEKLTRQPGVAATRIAYVTSSGSVDNQTVTLRIADADGDNPQTIVSSAEPILSPAWSPDGQRIAYVSFENRRAAIYVQDLNSGRRDLVASYPGINGSPAFSPEGQRLAMTLSKDGNSEIYVLNLLSRELIRLTDHFAIDTEPAWSPDGRHLIFTSNRGGSPQIYRMSATGGAAERISIDGDYNARASYAPDGRSVAMVTRINGAFRIGVLDTERGITRLLSNGTLDESPSFAPNGSMVIYATIHGGRGVLAAASVEGGGNQRLSQDSGQVREPAWSPFIR

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Crispr_ID: NC_018012_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018012_9

2332454-2332547

Orphan

Consensus_repeat	Method
CCTACTTATAGGCCAGGTTAGCGTCACTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018012_9

>merge|NC_018012|9|2332454-2332547|CRISPRCasFinder
CCTACTTATAGGCCAGGTTAGCGTCACTGTGGATCAGATCGCGGGAGCCGTAGAGATCGAGCAGGCCTACTTATAGGCCAGGTTAGCGTCACTG

>NC_018012|9|9|2332454-2332547|CRISPRCasFinder
CCTACTTATAGGCCAGGTTAGCGTCACTG	TGGATCAGATCGCGGGAGCCGTAGAGATCGAGCAGG
CCTACTTATAGGCCAGGTTAGCGTCACTG

Protein	Signature genes	Signature genes Name	Protein_function
NC_018012.1\|WP_157174609.1\|2343938_2344292_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NC_018012.1\|WP_014778535.1\|2329701_2330286_+\|nitrogen-fixation-protein-NifQ	unknown	unknown	gnl\|CDD\|377416
NC_018012.1\|WP_014778537.1\|2331539_2332403_+\|DUF2887-domain-containing-protein	unknown	unknown	gnl\|CDD\|371375
NC_018012.1\|WP_014778530.1\|2326654_2326933_+\|ferredoxin	unknown	unknown	gnl\|CDD\|224065
NC_018012.1\|WP_157174608.1\|2335549_2336530_+\|PilW-family-protein	unknown	unknown	gnl\|CDD\|227301
NC_018012.1\|WP_157174421.1\|2335067_2335544_+\|type-IV-pilus-modification-protein-PilV	unknown	unknown	gnl\|CDD\|131575
NC_018012.1\|WP_014778543.1\|2341463_2341865_+\|type-IV-pilin-protein	unknown	unknown	gnl\|CDD\|227303
NC_018012.1\|WP_014778544.1\|2343215_2343626_-\|hemerythrin-family-protein	unknown	unknown	gnl\|CDD\|274154
NC_018012.1\|WP_014778542.1\|2337137_2341460_+\|Tfp-pilus-assembly-protein	unknown	unknown	gnl\|CDD\|225953
NC_018012.1\|WP_041447215.1\|2332825_2333935_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NC_018012.1\|WP_014778546.1\|2344400_2346134_+\|biosynthetic-type-acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|223107
NC_018012.1\|WP_014778529.1\|2325099_2326611_+\|nitrogenase-cofactor-biosynthesis-protein-NifB	unknown	unknown	gnl\|CDD\|273539
NC_018012.1\|WP_014778528.1\|2324053_2324719_-\|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl\|CDD\|273990
NC_018012.1\|WP_014778534.1\|2329346_2329697_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|238126
NC_018012.1\|WP_014778541.1\|2336542_2337127_+\|Tfp-pilus-assembly-protein	unknown	unknown	gnl\|CDD\|227070
NC_018012.1\|WP_014778532.1\|2327375_2328665_+\|FprA-family-A-type-flavoprotein	unknown	unknown	gnl\|CDD\|223503
NC_018012.1\|WP_014778536.1\|2330260_2331202_+\|ADP-ribosyl-[dinitrogen-reductase]-hydrolase	unknown	unknown	gnl\|CDD\|131710
NC_018012.1\|WP_014778533.1\|2329048_2329333_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|238126
NC_018012.1\|WP_014778547.1\|2346193_2347246_+\|WD40-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|238121
NC_018012.1\|WP_014778531.1\|2326935_2327379_+\|nitrogenase-associated-protein	unknown	unknown	gnl\|CDD\|239331

Protein	Function_ID	Function_description	E-value
NC_018012.1\|WP_157174609.1\|2343938_2344292_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.02146e-09
NC_018012.1\|WP_014778535.1\|2329701_2330286_+\|nitrogen-fixation-protein-NifQ	gnl\|CDD\|377416	pfam04891, NifQ, NifQ. NifQ is involved in early stages of the biosynthesis of the iron-molybdenum cofactor (FeMo-co), which is an integral part of the active site of dinitrogenase. The conserved C-terminal cysteine residues may be involved in metal binding.	5.31105e-82
NC_018012.1\|WP_014778537.1\|2331539_2332403_+\|DUF2887-domain-containing-protein	gnl\|CDD\|371375	pfam11103, DUF2887, Protein of unknown function (DUF2887). This bacterial family of proteins has no known function. These proteins may be distantly related to the PD(D/E)XK superfamily.	1.60904e-60
NC_018012.1\|WP_014778530.1\|2326654_2326933_+\|ferredoxin	gnl\|CDD\|224065	COG1142, HycB, Fe-S-cluster-containing hydrogenase components 2 [Energy production and conversion].	0.000959226
NC_018012.1\|WP_157174608.1\|2335549_2336530_+\|PilW-family-protein	gnl\|CDD\|227301	COG4966, PilW, Tfp pilus assembly protein PilW [Cell motility and secretion / Intracellular trafficking and secretion].	3.35075e-18
NC_018012.1\|WP_157174421.1\|2335067_2335544_+\|type-IV-pilus-modification-protein-PilV	gnl\|CDD\|131575	TIGR02523, probable_type-4_fimbrial_biogenesis_protein, type IV pilus modification protein PilV. Pilus systems categorized as type IV pilins differ greatly from one another, with some showing greater similarty to type II or type III secretion systems than to each other. Members of this protein family represent the PilV protein of type IV pilus systems as found in Pseudomonas aeruginosa PAO1, Pseudomonas syringae DC3000, Neisseria meningitidis MC58, Xylella fastidiosa 9a5c, etc. [Cell envelope, Surface structures, Protein fate, Protein modification and repair].	6.06624e-20
NC_018012.1\|WP_014778543.1\|2341463_2341865_+\|type-IV-pilin-protein	gnl\|CDD\|227303	COG4968, PilE, Tfp pilus assembly protein PilE [Cell motility and secretion / Intracellular trafficking and secretion].	5.24239e-39
NC_018012.1\|WP_014778544.1\|2343215_2343626_-\|hemerythrin-family-protein	gnl\|CDD\|274154	TIGR02481, hemeryth_dom, hemerythrin-like metal-binding domain. This model describes both members of the hemerythrin (TIGR00058) family of marine invertebrates and a broader collection of bacterial and archaeal homologs. Many of the latter group are multidomain proteins with signal-transducing domains such as the GGDEF diguanylate cyclase domain (TIGR00254, pfam00990) and methyl-accepting chemotaxis protein signaling domain (pfam00015). Most hemerythrins are oxygen-carriers with a bound non-heme iron, but at least one example is a cadmium-binding protein, apparently with a role in sequestering toxic metals rather than in binding oxygen. Patterns of conserved residues suggest that all prokaryotic instances of this domain bind iron or another heavy metal, but the exact function is unknown. Not surprisingly, the prokaryote with the most instances of this domain is Magnetococcus sp. MC-1, a magnetotactic bacterium.	1.01408e-31
NC_018012.1\|WP_014778542.1\|2337137_2341460_+\|Tfp-pilus-assembly-protein	gnl\|CDD\|225953	COG3419, PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 [Cell motility and secretion / Intracellular trafficking and secretion].	4.74121e-95
NC_018012.1\|WP_041447215.1\|2332825_2333935_+\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	1.15786e-27
NC_018012.1\|WP_014778546.1\|2344400_2346134_+\|biosynthetic-type-acetolactate-synthase-large-subunit	gnl\|CDD\|223107	COG0028, IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism].	0
NC_018012.1\|WP_014778529.1\|2325099_2326611_+\|nitrogenase-cofactor-biosynthesis-protein-NifB	gnl\|CDD\|273539	TIGR01290, FeMo_cofactor_biosynthesis_protein_NifB, nitrogenase cofactor biosynthesis protein NifB. This model describes NifB, a protein required for the biosynthesis of the iron-molybdenum (or iron-vanadium) cofactor used by the nitrogen-fixing enzyme nitrogenase. NifB belongs to the radical SAM family, and the FeMo cluster biosynthesis process requires S-adenosylmethionine. Archaeal homologs lack the most C-terminal region and score between the trusted and noise cutoffs of this model. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Central intermediary metabolism, Nitrogen fixation].	0
NC_018012.1\|WP_014778528.1\|2324053_2324719_-\|phosphate-signaling-complex-protein-PhoU	gnl\|CDD\|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	1.63793e-38
NC_018012.1\|WP_014778534.1\|2329346_2329697_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|238126	cd00207, fer2, 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.	1.93042e-08
NC_018012.1\|WP_014778541.1\|2336542_2337127_+\|Tfp-pilus-assembly-protein	gnl\|CDD\|227070	COG4726, PilX, Tfp pilus assembly protein PilX [Cell motility and secretion / Intracellular trafficking and secretion].	2.19143e-24
NC_018012.1\|WP_014778532.1\|2327375_2328665_+\|FprA-family-A-type-flavoprotein	gnl\|CDD\|223503	COG0426, FpaA, Uncharacterized flavoproteins [Energy production and conversion].	1.36596e-141
NC_018012.1\|WP_014778536.1\|2330260_2331202_+\|ADP-ribosyl-[dinitrogen-reductase]-hydrolase	gnl\|CDD\|131710	TIGR02662, ADP-ribosyl-_glycohydrolase, ADP-ribosyl-[dinitrogen reductase] hydrolase. Members of this family are the enzyme ADP-ribosyl-[dinitrogen reductase] hydrolase (EC 3.2.2.24), better known as Dinitrogenase Reductase Activating Glycohydrolase, DRAG. This enzyme reverses a regulatory inactivation of dinitrogen reductase caused by the action of NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase (EC 2.4.2.37) (DRAT). This enzyme is restricted to nitrogen-fixing bacteria and belongs to the larger family of ADP-ribosylglycohydrolases described by pfam03747. [Central intermediary metabolism, Nitrogen fixation].	1.48733e-124
NC_018012.1\|WP_014778533.1\|2329048_2329333_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|238126	cd00207, fer2, 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.	3.00804e-16
NC_018012.1\|WP_014778547.1\|2346193_2347246_+\|WD40-repeat-domain-containing-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	3.92328e-90
NC_018012.1\|WP_014778531.1\|2326935_2327379_+\|nitrogenase-associated-protein	gnl\|CDD\|239331	cd03033, ArsC_15kD, Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.	4.96544e-58

>NC_018012.1|WP_014778537.1|2331539_2332403_+|DUF2887-domain-containing-protein
MKTDSSIYTFLATGPEAFRVLTGGLTLEGEYVFRSVTFKSLERRADGLYEPLDPDRPVYLIEFQAQSAAAAWYNLLTKIGLYGEEHPEREVRGLLIVLHARALPTRPSRVGAPESIAAAICLERFLPEWLEREPDNPFLAALAPLIITRDAALTERAPALWHAIQHAPLEPAARTALSQILEFWLFERFRSLTAEEISTMLNIFTPLEETRAYQSIFVKGEAKGKAEGEAKGKAEGKADSLKRLLTRRFGPLPAGVSARIDSADIPQLDAWLDAVLDIQSLDELLTH
>NC_018012.1|WP_014778536.1|2330260_2331202_+|ADP-ribosyl-[dinitrogen-reductase]-hydrolase
MFVLDPRTEFIPTDLPAGTLYDRAAAAYLGLAVGDALGATVEFLTPREILSQYGEHRDIVGGGWLGLRKGRVTDDTEMSLALGRSILATGGVNAGAIAHAFSEWMRTKPVDIGNTVRRGISLYRQTGATEVARHDYDAGNGACMRCLPIALYTLGADPDAVEQANRIQAHVTHHNALSDAGTLAVIRMVQAGLLGGDRGHLKELAEALVAEDERYRYDRRRMENPGGYLVETLRAVFQALFATDSFESALVEVVNRGGDADTTGAILGMIAGAHYGLDAIPRRWLNVLDKETARDCKAQAIALLRASPHMSGA
>NC_018012.1|WP_014778535.1|2329701_2330286_+|nitrogen-fixation-protein-NifQ
MLALADELTREAEHVFARLMARAVGAGNDTAFASMIATRAAGGGALPVWLGLDLQAFRGLITYHFPGVSPDVLSATDGGIPLKAARQDEREELIDLMLTYRAHESPSEVWMAQTVAAGCMAGDHLWHDLGLWNRGELTALMRRNFPLLAARNVKDMKWKRFLYKQLCETEGIHVCRAPSCEVCVDYHVCFGPED
>NC_018012.1|WP_014778534.1|2329346_2329697_+|(2Fe-2S)-binding-protein
MALVTFSSPDYKDKTVYAVAGSHTETLLKLAKEHKIPVHHDCQDGECGNCLVRVTSVDKKTQRMGYHLTDKEQTVLRHLGKLTKDDIDRMAVDDMPSEWRLACQMIVRDEDILVEY
>NC_018012.1|WP_014778533.1|2329048_2329333_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MAKAKITFTDIDQTVNVPAGTRVIEVSEKIGAGIIYGCREGDCGTCMMHVEEGWNNLTEPSVLEEKVLRENMASRHDRLACQAQILGDCRVKPA
>NC_018012.1|WP_014778532.1|2327375_2328665_+|FprA-family-A-type-flavoprotein
MTASRQTVAQPGEAVGIVPGVHWIGVLDPSLRSFDIILRTANGTTYNAYLVRGSDGVAIIDTVKAGFAEEFFARLESVARYDEIRVIVLNHLEPDHTGALPELMRRAPQAKLYISTRATTMLKALLKPKGDERPFEYETVGTGDEVSLGDRTLRFLHTPFLHWPDTQCTYLVEDGVLFSGDVFGCHHCDSRLFNDRCGDFRFAFDYYYAHIMRPFKTYVMDAIKLIEPLTLKIIAPTHGPILRDRPRRSLTRYRELSSASFSERIDNDERSLIVFYMSAYGNTARMAEAICAGAEEAPGVRVSLYDLEGGELQPFVDLIESADALALGSPTINGDAVKPIWDLLSSLAVIDLKGKLGAAFGSYGWTGEAVRMIEDRLRGLKLRVPVPGVRVKLIPTDEELDACRDFGRALAGAIVSGERGKVIDFADLG
>NC_018012.1|WP_014778531.1|2326935_2327379_+|nitrogenase-associated-protein
MASSVIFYEKPGCLSNGRQKALLTSLGHSLTVRDLLAEPWTAERLRSFFGAMPVRDWFNPTAPRVKQGEVRPETLDESTALALMLADPLLIRRPLIETECGRGCGFAPGPMLDALGVALEPEQDLQSCSRIGPDPHCERPSARAAIR
>NC_018012.1|WP_014778530.1|2326654_2326933_+|ferredoxin
MAFQIIEGCVNCWACEPLCPSGAIFAATPHFQIDAKKCTECEGDFAEPQCASICPVEGVILDGLGVPANPPGSLTGIPPERMAAAMAEIQAR
>NC_018012.1|WP_014778529.1|2325099_2326611_+|nitrogenase-cofactor-biosynthesis-protein-NifB
MALKVLSHDEGAPVGGCAASGCGSSTDRLAHLPEAIRAKVNNHPCFSEDAHHHYARMHVAVAPACNIQCHYCNRKYDCSNESRPGVVSEVLTPDQAVKKVMAVAAAIPQMTVLGIAGPGDPLANPARTLETFRQLSEKAPDIKLCVSTNGLALPAVVDELCKHNIEHVTITINCVDPDVGAKIYPWIFWNNRRIKGRRAAEILIEQQQKGLEMLVARGVLVKVNSVLIPGVNDEHLKEVSRVVKAKGAFLHNVMPLIAEAEHGTFYGIMGQRGPTTEELQALHDSCAGDMAMMRHCRQCRADAVGMLGEDRGHEFTLDKIEHLDIDYAEAMVRRAEVHSAIEANRTAQRRRTGETFVSLASLQRKIPVKPEPRPVLMAVATTGGGVIDQHFGHAREFLVYEASSQDVRFIGVRKVDQYCAGDTTCGEAETALHKTLRALDGCEVVLCSRIGYEPWSQLEAAGIAPNGEHALEPIEEAVTAVYREMAESGRLDRPIPEPQRMSA
>NC_018012.1|WP_014778528.1|2324053_2324719_-|phosphate-signaling-complex-protein-PhoU
MADKINLVQKKRVQLQAAIGDLGALVIQALNQSVVCLKAHDLILAARIIEADAAINQQRRLLEQQCLVTLAAYQPAGEDLRALGACMELVSELERIGDYAGDVASVMLKIGEERLPPEPVAAILGVAGNAIAMLTDALDAFTSNSDESTARAAVVREAQVDRDEEAIIQQVLGRMRTDAGFALTGTYLLWIVHNYERVADRATNVAERAVYVAAGQTPDLN
>NC_018012.1|WP_041447215.1|2332825_2333935_+|IS5-family-transposase
MSKAGRPPKIHEAEQAVLRQIVTDRPTSTLSEIARELAARTGIEAHEATIRKSLREAGVTRLRGESGLEAQARATPRRYGYTDAHRRHDPDQSYPSCLTDAEWDLVAALFEMPGGRGQPPRVSRRSILEACCYVVRTGCAWRMLPHDFAPWQNVYKTFRRWSAAGKFEQMHDRLRGQWREREGREIAPTAAVLDAQSTRGSPQGGPSGFDAGKQVKGRKRSLVVDTLGFVLAVSVVAANLQDRDAASGAVADAAAKYPQINTLFVDSAYAGQFAQTTEQTHAIRVEVVRHPANKSVGSWHVDGAPDRVVIANADGFVPLPKRWVVERTHAWNERARRLIMHHDRLPAVSETWVWLAEARILLRRLTTTV
>NC_018012.1|WP_157174421.1|2335067_2335544_+|type-IV-pilus-modification-protein-PilV
MSRVADQVMPQRLSHRQSGFTLLEVLIAVLVLGVGMLGAAALQISVMKNNQSSFQRTQAVMLSYFMLDAMRANRADAASENYDLTKTCTVTAAGLVLVDNDKHFWLQALKDNLGNAATTCGEIDCAPGATTCTVRIYWNDERGTGGSASQMFETSTRL
>NC_018012.1|WP_157174608.1|2335549_2336530_+|PilW-family-protein
MRNNGRTLQAGLTLIELMIAMTLGLFLMLGVTNVYLAQRQAYRTNENLANMQNNARAAFELMARELREAGVNPCGTPIVSNVTNGSSASTWLNWSAGGIQGFESSASLPVDVVTTAAARIAGTDAVIVRSGSLDNPMIIADHTSTTDPLKVNTASHGFLTNDLLMACDFRQATIFQTTSASSASVDIGHATGVGTPGNCSDSFVTNCAGAGHQFAANGFLTELSVTAWYVGDNGRGGSSLYRILNGGAPQEIAEGITDMQLQYLTRTGTSPATDYVDASSIASWANTANALVIAVRVTLDLESRENAGSDGAPLKRSLIHVVNRRG
>NC_018012.1|WP_014778541.1|2336542_2337127_+|Tfp-pilus-assembly-protein
MKKTGSRARQEGAALIVALILLVVITLLSLSGVHTVSLEERMTANTFDRGLAFQSAEAALKDGEAAALAQSDAIPPNSGFPGSGVYNDADSTCGSSTCNANGLCAQPDKDCTARWLDSSVTNWMNASGTGLTTLQQAVAAQYLVEFLGGNFPCDVDNPTSGAQNCYRYRVTARSHNPASSNRAMVILQTIYAAD
>NC_018012.1|WP_014778542.1|2337137_2341460_+|Tfp-pilus-assembly-protein
MNRFNQNGCDRPRYRLVIVKQFLIAAVFGATIAAASAAPVILNTPLITNQSTIPMSMMVVGRDHTLFYEAYNDASDLNGDGILDVRFKPSITYYGLFDSSLCYSHSGGDGNSDKFSPNGTAGALGTCASGWSGNWLNYATTSRIDALRKVFYGGYRDVDTNSETVLRRAYIPQDAHSWAKEYTSTTVDGYDIANYTPLGQPPAGKRHFFGNLTATAGVNCSTLSDCSDKPPLLRVVRRSDRRVWNWASTERPVLKWDDDGGVDRDDYTVRVEVCTGTYSGGCKRYPNGSLKPIGLLHEYGENDTMLFGLLTGSYNKNKSGGVLRKVVSSFKSEVNANTGQFIAADATIVNALNNLRIRDFNNNRSDNAYRGGWVTTRAMNEGEFIDWGNPTGEMMYETLRYFAGKASATTAFATTGGYDAQLGLPVATWDDPYDRTNSAAKAHWCARPNMMVVSGINPSFDSDQVPGTAFGSFSDSLGSLNVATVAQTITTGETGITGMRFIGQSGTEYDGAPTAKNVASLGTIRGLAPEEPTKQGSYYSAAVAHYGKITDLRTLTGTQTVDTYSVVLSSPLPRIEAKTTSGSIITLVPFAKSVGGESISNTKGQFQPTNQIVDFYVDTIVNTSGSSGADYNSTINGGRYYASFRINFEDVEQGADHDMDAIVVYEISAEADGNLKVKLTPEYQAGGIQHSMGYVISGTKNADGVYLVVQDENVNRTYYLNVPPGQIPGYCDVSTPPAACQKLPYIGGTGTLAYSERFFEGGSSGATLLRDPLWFASKWGGFVDFNDNDKPDLPSEWDADNNGVPDTYFLVQNPLKLREALKKSLDTIVERSASAGNITSNGQKIDGNTRVFQSQFNSATWDGELFAFPITSSGVSATPSWKASEHLPVAASRKIFAWNDATTTGIAFTWASLSTDQQTALGSANVLDYLRGDQSKEIQNAGIYRTRKKLLGDIVHSSPYYVKDTDTVYVGGNDGMLHAFNAVTGAEVFAYIPGLVFGNLAELALPTYSHKFFVDGDLAVSSLAETPGKNILIGSTGRGIKGLFALNVTTPGSFAASNALWEYSGATDDDLGFVLGRPQIGTLENDAKVVVFGNGHNSVNGKAVLYVFGLETGTELKKIPVTAGGNDNGLSTPTLYDSDGNGKIDTVYAGDLKGNVWRFDVTGAASAWDSHYLSGTTPVPFFTAMSPVDPAPSTPPVFVDENKPQAITAQLTVAKNTVTSDPNYGKTFLFFGTGSYVYQGDPAYEQVQSWYGLIDDNTTISSRTNLALREIKLSGTVASYDVRAFSEATAGDMTGKKGWVLDLMDPDPRGERIVTRSNLYQLLEPVLIASSIIPDDDPCEAGGSGFVNAINPFTGARLGYSPFDLNDDAQFDESDKLVPTDGTSRKVVGSFDPGVAMPGEPSVIGDRLVVGGSSGDIADMRVNLGNKRTGRLSWREIKGD
>NC_018012.1|WP_014778543.1|2341463_2341865_+|type-IV-pilin-protein
MRSRKGFTLIELMITVAIVGILAAIAYPSYQNQVLKTRRAAAKGCLLELAQFMDRFYTTTMVYTGAVLPATACRTDLASFYTFSFPVAVTATTYSIQAAPQGAQTGDTLCGTLGINQVGTRTESGTGTAADCW
>NC_018012.1|WP_014778544.1|2343215_2343626_-|hemerythrin-family-protein
MLRDWSDIYLIGIAEIDRQHQGFFTAAHRLYEDILDRDGKSAVVEAMAFMREYAEQHFQTEEAFMRQHHYPSLQEHLRLHAGFFRRLDELENDLMIFGPSQALADRALDITQDWLIDHIADEDMLYSLHFRAGAVS
>NC_018012.1|WP_157174609.1|2343938_2344292_+|helix-turn-helix-domain-containing-protein
MTRRIGSRLRAERQRRGWSLSDLSARTADQLSKSRISNYEQGIRRMGLEAAHQIAAALETVSPAWLLMLEEYNPLTDDELRLIQGFRAMNEARQRQLLDMVEIPEQQDTSSEPVTTT
>NC_018012.1|WP_014778546.1|2344400_2346134_+|biosynthetic-type-acetolactate-synthase-large-subunit
MTNSIRTGACLLLDVLTDLGVDYLFGHTGGAVIPIHVELNKRLRRGAAVPKFILCRQEGGAGHAAEGYARVSGRVGVALATSGPGATNLATPIADAYKDSLPTLFITGQVPSGAIGTDAFQEVDTVGFTRPISKHNYLVKDVRDLEWVLREAHALALHGRPGPVVVDICKDAQLATVESQNPPRTRHREVIPFDSVRAAAILDALASASRPVVKAGGGVIHAGVAPALAAFAERFDVPVTTTFNALGTLPFETPYNLGMPGMHGTIPANYALRDADLILTLGGRFDDRVAVRGFAADKRIAHVDIDPSEIDKMIATDLSLVAGLDDFLEYALASGRTARHPDWLSQVGEWREQMPKPYGVSEYIKPQAVVELLSELTQGDATLVTGVGQHQMWAAQYYRFQRPRQWVSSGGLGTMGFGLPAAIGAWFADPSRPVVLIDGDGSFQMNLQELGTVVANRIPLKMFVLNNSFLGMVRQWEDMMDGGHHYETCLARVADCDADCTELDQTCRRQIPNLTGLKYVYQRLATLRIKEPAELREQLAAALAEPGPMLVDVWIDKAENVIPMVRPGHTLAQMIEA
>NC_018012.1|WP_014778547.1|2346193_2347246_+|WD40-repeat-domain-containing-protein
MPTSTWRSVQRKAGTDTIYGVALSPDGKRLATASWDSLVKLWDVAQGRVEHTLAGHEGRVYTVRFHPDGQRLASGGTDTSVRLWDANTGQELWNRSGHSSLVYSVDFQPQGELLASASEDGTICLWTVDSGELVRTIEGHPQYVQGVVFTPDGERLISGSRDSTAAIWEVATGAELARFDVINNGINSAQINADGTRLLLSNVDGSVGLWDLNSLAMIREMEGHTYPAWSAIFSPDGKLIASGSADKTIVLWDAATGTELSRLTGHGMDVYSVAFSPDGRWLYSGGVDKTIRVWGLDVTDAEWQPVSAAWQVAEAESRIEEEAALALAEQQRQQSASAPKLWGRLFGGKR

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Crispr_ID: NC_018012_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018012_10

2830403-2830509

Orphan

Consensus_repeat	Method
CAGTTCCTCGTTGACCGATTGCA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NC_018012_10

>merge|NC_018012|10|2830403-2830509|CRISPRCasFinder
CAGTTCCTCGTTGACCGATTGCAGCTCTTCCTTGGAGGTCTCCAGCTCTTCGTTAGTGGATTGCAGTTCCTCGTTGACCGATTGCATCTCCTCGTTGGTTGATTTCA

>NC_018012|10|10|2830403-2830509|CRISPRCasFinder
CAGTTCCTCGTTGACCGATTGCA	GCTCTTCCTTGGAGGTCTC
CAGCTCTTCGTTAGTGGATTGCA	GTTCCTCGTTGACCGATTG
CATCTCCTCGTTGGTTGATTTCA

Protein	Signature genes	Signature genes Name	Protein_function
NC_018012.1\|WP_157174441.1\|2839077_2839371_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014778959.1\|2838604_2839000_+\|septal-ring-lytic-transglycosylase-RlpA-family-protein	unknown	unknown	gnl\|CDD\|223868
NC_018012.1\|WP_157174624.1\|2819862_2820327_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379267
NC_018012.1\|WP_014778962.1\|2840410_2841292_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NC_018012.1\|WP_014778961.1\|2839385_2840408_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223912
NC_018012.1\|WP_014778964.1\|2841771_2843028_-\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|238452
NC_018012.1\|WP_041446977.1\|2837982_2838393_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350250
NC_018012.1\|WP_014778956.1\|2835037_2837674_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133057
NC_018012.1\|WP_014778951.1\|2824919_2827241_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|236645
NC_018012.1\|WP_014778957.1\|2837762_2838005_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|198034
NC_018012.1\|WP_157174438.1\|2815633_2817358_+\|cache-domain-containing-protein	unknown	unknown	gnl\|CDD\|223910
NC_018012.1\|WP_014778952.1\|2827806_2829567_-\|response-regulator	unknown	unknown	gnl\|CDD\|223715
NC_018012.1\|WP_014778948.1\|2820413_2820800_+\|thioredoxin-fold-domain-containing-protein	unknown	unknown	gnl\|CDD\|225660
NC_018012.1\|WP_014778954.1\|2833066_2834716_+\|glycosyltransferase-family-39-protein	unknown	unknown	gnl\|CDD\|227621
NC_018012.1\|WP_014778950.1\|2821383_2824659_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|274362
NC_018012.1\|WP_157174439.1\|2820942_2821113_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_041447569.1\|2817705_2818407_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|223736
NC_018012.1\|WP_083845823.1\|2815321_2815555_+\|glycine-zipper-2TM-domain-containing-protein	unknown	unknown	gnl\|CDD\|182532
NC_018012.1\|WP_041447570.1\|2818792_2819527_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NC_018012.1\|WP_014778963.1\|2841489_2841744_-\|molybdopterin-converting-factor-subunit-1	unknown	unknown	gnl\|CDD\|182985

Protein	Function_ID	Function_description	E-value
NC_018012.1\|WP_157174624.1\|2819862_2820327_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379267	pfam13565, HTH_32, Homeodomain-like domain.	6.2079e-08
NC_018012.1\|WP_041447569.1\|2817705_2818407_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	5.81044e-18
NC_018012.1\|WP_014778962.1\|2840410_2841292_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.00406e-90
NC_018012.1\|WP_014778961.1\|2839385_2840408_-\|ABC-transporter-permease	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	2.04517e-26
NC_018012.1\|WP_014778964.1\|2841771_2843028_-\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	1.88453e-168
NC_018012.1\|WP_014778959.1\|2838604_2839000_+\|septal-ring-lytic-transglycosylase-RlpA-family-protein	gnl\|CDD\|223868	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane].	6.79772e-45
NC_018012.1\|WP_014778956.1\|2835037_2837674_+\|glycosyltransferase	gnl\|CDD\|133057	cd06435, CESA_NdvC_like, NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.	5.56851e-142
NC_018012.1\|WP_014778951.1\|2824919_2827241_-\|EAL-domain-containing-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	5.14589e-102
NC_018012.1\|WP_014778957.1\|2837762_2838005_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|198034	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain. This domain is found in AbrB from Bacillus subtilis. The product of the abrB gene is an ambiactive repressor and activator of the transcription of genes expressed during the transition state between vegetative growth and the onset of stationary phase and sporulation. AbrB is thought to interact directly with the transcription initiation regions of genes under its control. AbrB contains a helix-turn-helix structure, but this domain ends before the helix-turn-helix begins. The product of the B. subtilis gene spoVT is another member of this family and is also a transcriptional regulator. DNA-binding activity in this AbrB homologue requires hexamerisation. Another family member has been isolated from the Sulfolobus solfataricus and has been identified as a homologue of bacterial repressor-like proteins. The Escherichia coli family member SohA or Prl1F appears to be bifunctional and is able to regulate its own expression as well as relieve the export block imposed by high-level synthesis of beta-galactosidase hybrid proteins.	0.000542796
NC_018012.1\|WP_157174438.1\|2815633_2817358_+\|cache-domain-containing-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	5.96687e-76
NC_018012.1\|WP_014778952.1\|2827806_2829567_-\|response-regulator	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.66604e-47
NC_018012.1\|WP_014778948.1\|2820413_2820800_+\|thioredoxin-fold-domain-containing-protein	gnl\|CDD\|225660	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones].	1.75132e-32
NC_018012.1\|WP_014778950.1\|2821383_2824659_+\|PAS-domain-S-box-protein	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	1.64027e-88
NC_018012.1\|WP_041446977.1\|2837982_2838393_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350250	cd18683, PIN_VapC-like, Uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.2513e-20
NC_018012.1\|WP_014778954.1\|2833066_2834716_+\|glycosyltransferase-family-39-protein	gnl\|CDD\|227621	COG5305, COG5305, Predicted membrane protein [Function unknown].	1.00492e-31
NC_018012.1\|WP_083845823.1\|2815321_2815555_+\|glycine-zipper-2TM-domain-containing-protein	gnl\|CDD\|182532	PRK10540, PRK10540, osmotically-inducible lipoprotein OsmB.	6.66618e-12
NC_018012.1\|WP_041447570.1\|2818792_2819527_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.02224e-21
NC_018012.1\|WP_014778963.1\|2841489_2841744_-\|molybdopterin-converting-factor-subunit-1	gnl\|CDD\|182985	PRK11130, moaD, molybdopterin synthase small subunit; Provisional.	9.64202e-28

>NC_018012.1|WP_014778952.1|2827806_2829567_-|response-regulator
MTHNDEAENRPDRGSSAHGQTASAETALRRRKGEREGVMFDGSLSSMGPDEIGRMLQDLNVHQIELEMQNEELRRTQEALELSRARYFELYDLAPVGYVTITEQGAIREANLAASKLLGIPRGNLVNRPLSGFILPEDQDNFFRCRRHLFATGDWQACDLRLRRGGGLPFPAHLEFALGKDGDAGATHCLVILSDLSERKRTEAAQLAEAIQREENRRKDQFLALLGHELRNPLAPIRHVAEVLRLAPTHAPAMIAQASDILTRQVAHLVRLVDDLLDISRIGRGKMEMDRRPCDLREAVEHAAEQVRPLLDERRQRLEMTLPALPLTLDGDAVRLAQVVVNLLRNASQFSPPEASIVLSLEAVDGRALLQVRDSGAGLDPSLYSRIFDPFVQAEQTPERRQGGLGIGLALVKGVVELHGGSVTATSPGLGQGSTFSVRLPLSDRLPADTARSLPEARTCPNVYRILVVAERPATAENCALQLRLLGQRVETAADATAALAVVERLRPDLILLDVGLPGMDSGELARRLRATEPGRTAWLVAVAGDGQEPDVEGARAAGFDECLLEPLQRDALADLLARCPVAPFR
>NC_018012.1|WP_014778951.1|2824919_2827241_-|EAL-domain-containing-protein
MPQSNDPRHTPAAFQAGRSYSWHDLRRRAEARLGATEILEPIASLAVGAGSLTPNTHELLVHELQVHQLELEMQNDELRQIQEELEISRARYFDLFDLAPMGYLTLDEAGLVEEANLAAATLLGIPRAELVGRPLTRFILPEDQDAYYSCRNRLWSTGERQVGELRLRCDDGQSVWIRLETSLSRDARSAHTIWRATLSDITERKRSERDLLDTLRLRLMGEIAELTFWEWSPNTDEVHFPPEWHGQTGYDPAEAPKRLGEWAALLHPEDGEPILFQLTGFVDAPETPCEIQYRLRRKDGLYRWFVARLKAIQDARGQVERVLLVQQDVTARKQAEDRAIEVAQHDPLTGLPGRALLEHVANHMLASARRAGRQLAVLFFDLDRFKAINDAYGHPVGDRLLRAVAQRLLDTFRAEDLVARLGGDEFVVVLSHIRDADDAARAARNAIVALTPAYAIEGLELPCVASLGISLFPQDGDNIDCLIQRADLAMYHAKQFSPGHYQFVTEALNRKVCDETRLEARLREGLSGNEFRLVYQPVLDTRSGAVTGVEALLRWPQPDRSDVAPQNFLPVAEFSGLIHELGRWVFQEACRQHLAWRNSGLPPIRIAVNVSARQFHHQGFLGQLTAASEAAGIDPGALSLELSGAALMQDKEGSQRLLGELKQLRVGVALDDFGMGCSAIGELEQLPLERLEINRALVQRLGSTDSMPAVLKTIIGFGHALKLDITAVGVEAESDLEFFRAHRCNQVQGFFLGVPMSGERFVGWYREHAARMH
>NC_018012.1|WP_014778950.1|2821383_2824659_+|PAS-domain-S-box-protein
MNHPSQLDQALDATEILARDIADQQREQNTQERERARLRTLINAIPDLVWLKDPNGVYLACNTMFERFYGAPEADILGRTDIDFVPAPLAEFFRAHDLAAIAAGVPSRNEEVLTFAADGYSGLFETIKTPMRDAAGTLIGVLGIARDITAARQTQEALSEREEIYHAIVGQASDGIVLIDAETRRFAEFNAAAHQALGYTRDEFASLALDDIQAELTPEQVGERMNALLARGGGTFELPHRHKDGSVRWLRISNRLMVIRGRMYLAAIWTDITEQRRIAADLEIHRQHLEQLVVARTTELESAHRRLLVSDARLQAVFEMSQRAHALDEREILQWGVEAAVSITESQIGYLHLVNEDQETIQFYVWSDATLEHCTALHETHYPVSEAGIWADPLRQRRPVAHNDYQGMSDRKGYPPGHTHLIRHLGVPVVEGDKVRVLIGVGNKATDYDDADEHEIQLLVNDLWRIVMRRRADAALAMAKESAERASQAKSRFLANMSHEIRTPMNAIIGLSHLARRHASEPRQQEHLRKIAESAQHLLGVVNDVLDISKIEGGRIQLEEADFALAKVLENLRTLTADKATAKGLRIRQEIAPALAGILRGDALRLGQILLNFVVNAVKFTERGEIVLRAWVLEETALDLLVRFEVKDTGIGIALADQARLFVAFEQADSSITRRYGGTGLGLAINRRLAHLMRGEIGVESQPGEGSLFWFTARLGKGAEPAGRAGMSGDPETADSAPDRRLMARSAGLRLLLAEDNPINQEVALSQLQELGFAVDLASNGAEAVELARRNAYALILMDVQMPTMNGLEATRAIRRLPGRAVTPILAMTAGAFQEDREECLAAGMDDHLAKPVDPDVLHATLLKWLPKSGRPAARAESTAPTSTAEQHAIRRRLQAIEGLDLELGLKPVQGRLDSYLRLLASFVSRHSDDARSIVQQLRAEDRVTACRDAHSLKGVAGTLGARRLATLAAELEQAIREGHAAHEIEQRAQALDTELRALVIGLATVLPTSAADAPNIAVDWPRVRETLAHLDTLLTEDNTLANGVFRESAALLIAALGEPAREIGRMIEAFDYDSARHWLRAVSAPGSAGL
>NC_018012.1|WP_157174439.1|2820942_2821113_+|hypothetical-protein
MDRRPDPETAELRFRATQGHRLWIIALAMLLLSAVLAYPLSRRLARPVRDFQHAAL
>NC_018012.1|WP_014778948.1|2820413_2820800_+|thioredoxin-fold-domain-containing-protein
MSATPWDTDPIHPNPNIFDIDTDRFQTEVLDASRSHPILVDFWADWCAPCRALSPHLERVVEELDGQVRLAKLEVDEGDNMRQAGHYKVRGFPTVILFLEGRELARFSGARSRYQIREWLRQHLVPGS
>NC_018012.1|WP_157174624.1|2819862_2820327_+|helix-turn-helix-domain-containing-protein
MVLRAADGEHNKAIAHALGLGEDGVGQWRGRWANSQERLAALADQPKRLRATIEEILSDRPRSGHPGDFTAEQIGQIIALARETPPPPLTHWTRQDLMREIMARGIATTISASTIGRFLTSGGPHAPSHPVLAPSRDQGRDAPPFRDTHSPVQK
>NC_018012.1|WP_041447570.1|2818792_2819527_+|Crp/Fnr-family-transcriptional-regulator
MPSPPTPRQNHLLAALPDTEFEHLLPHLEWVPLPLGEALYESGAALQHVYFPTTAIVSLLYVMENGASAEIAVVGNDGIVGIALFMGGATMPNRAVVQCAGDAYRLKGQVLKEEFARIGGRRHGVLPPLLLRYTQALLTQMAQTAVCNRHHTVDQQLCRWLLISFDRLPSNELRMTQELIANMLGVRREGVTEAAGKLQTAGLIRYTRGLITLLDRAGLEARVCECYAVVRKEYDRLLPEASQD
>NC_018012.1|WP_041447569.1|2817705_2818407_+|helix-turn-helix-domain-containing-protein
MNPPVLFVNRLLASLPGKDRRQILASCESVELHLAEVISEPGDRILHVYFPTDSFVSMLTPADDHAGLEVRLVGHEGMIGTPLILGVEVTLLRTLVQGAGSAWRMTPEQFAAALRQSSALQGVLNRYLFLLTNEVERMVACTRFHVLEARLARWLLMTQDRAHSDRFHITHEFLASILGVRRVGVTKAASALQQRQLIRYRRGDIEILDRARLIDAACGCYGAAEAMYERMLG
>NC_018012.1|WP_157174438.1|2815633_2817358_+|cache-domain-containing-protein
MNALRKITINHRLWILSGMVAIGFSVGLALALMEMHSLLMQDKIEQVAKLVETAKSVLADQQRQIATGELDEVGAKAAALRVLAGLRYEGNNYFWVTDKDDRMVMHPIKPELNGSDTRTHRDADGKRFGAEIADKARAAERGTVEYTWPKAGSTAPIPKIAYFETFPTWGWIVATGVYVDDVDAAFWRNAAFMGAFGLTMLLVVVSLALLTARSVVVPVREAAQAMLDIANGEGDLTRRLDTTGRDEVAEMAAGFNQFAGKTERMVIAVGGATGEIASASEELSAITQSSSAGMDRQRGETQQVATAVTEMSATIKEIAKNAEDAAAAAFAADGHARKGGETVNGVLAANRQLAHEVEQIAASIRRFSAESLSIGSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRILASRTQQSTSEIHRMIENLQGGAQEAVAAIHKGETITADTLEQASQAQEALEQIVQSIGTIRDMNTQIASAAEEQAVAAQEIDRSVVNISDLSEESARNSEHTAAASLELSRLSTELRMLVGQFKVGTGIEPIRQDRAARSGYAPSPRLHGAYPKG
>NC_018012.1|WP_083845823.1|2815321_2815555_+|glycine-zipper-2TM-domain-containing-protein
MSRQEQSTLAGAGIGGVAGSLLTDGSAIGTIGGAAIGGVIGHGVGNDRDHDRRDDRYGSDDRYRNDGRYNPNGRYYN
>NC_018012.1|WP_014778954.1|2833066_2834716_+|glycosyltransferase-family-39-protein
MQHPLSSLSAAGPRTASDADTNLLIGLLLVILSAGAARLFGLDHLLVWHDEVFTLLRVFGYRHDEVQAAVFSGQLLTPDDLLRFQRPDPAHTWADAFRAFAGHPEHAPLYYALARLASALPLDPVSAARGVSAVFGVLLIPTVYWLTRELFGRGLVPWIAAALVACSPLQFLYAQEARQYALWLLLTASSSAALARAMRRDRRADWWLYGLFMTLGVYAHLLFVLIVPAHALYGLLASRASGAQAGRLGRLGRRWGSAVGVSLILFTPWLWVIATQPGRVDHFTHWMQRPAGLDDLLAAWALHPTRTFVDLTSSPVLWWSLLTVPLVWALARFVRRAPRPAVWLLVAMALAYIGVMLGPDLLLGGSRSLHARYALPALLAIQIMVAWVIGTAIAAPPGAWSRRSGLMTLALLIALGGWSLFAIQRAETWSTKNFSAQNADIARIANASTATLIVASESGVGLGELISLAYHLAPEARLWGQPWDQRITPPAGFETLIVLTPSNQLRDAIGPERPLTPLAGTWQWFAVTPRRASSDTPTAPPHANEGTVY
>NC_018012.1|WP_014778956.1|2835037_2837674_+|glycosyltransferase
MNRSINLVIPLLIAALTATAWWLLNQPSEEPPWPNRIQGFSFAPMRADDDPSLKKFPSVEDIDADLALLEGRAHAVRTYTVEDTLAEIPRLAAAHDLNVTLGAWIGAEPAANETEIKRLAEVLNEGHRNLVRVIVGNESILRRDLPVSELIGYLDRVRKLTWLPVSTAEPWHVWLKYPKLVEHVDFITVHLLPYWEGLPVDQAVDYAVSRYNELKEAYPKKPIVIGEVGWPSNGRRNRGAEPSPTNQTRFLRRFLARAEAENYIYYVMEAFDQPWKAKTEGATGNYWGVYNANRQAKFEFSQPVVRIPQWRELAGLSVVMGVLLLVFLYRDSATLAKRGKGFLALVTYAISTAAVWIVYDYTRQYMTPATAIVGVLLLIGGIGVIVLLMAEAHEWAESIWLNKWRRPFPLRTVPDEQLPFVSVHVPAYNEPPELLCATLDALAALDYPRFEVLVIDNNTKDPKVWEPVQAHCETLGERFRFFHVDPLAGYKAGALNFALRQTDPAAEVIAVIDADYLVIPTWLRHLVPGFADPEVAIVQAPQDYRDADQNAFKAMCMAEYRGFFHLGMVTRNERNAIIQHGTMTMIRRQTLDEVDGWAEWCITEDAELGLRLFEAGHKALYIPCTYGRGLMPDTFADFQKQRYRWAYGAVRILLRHRRELLGLRKTALTAGQRYHFVAGWLPWFADGFNLLFNFAALGWSVAMVMFPDTITPPYLTVALVPLVLFVFKMSKSLVLYRRRVTATLRQSLAAGLAGLALSHTISRAMFGGLVTGKLGFFRTPKMAEAPAVVRALADTREEGLFAFAFLLAAGLVLLRDDAYMLDVRIWVAVLVVQSIPYLASVLVSLVSAWQRLPADLVGVMSEMNGQRLSGVQPVSREG
>NC_018012.1|WP_014778957.1|2837762_2838005_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MNVFEKTAKISSKGRITLPKHVRDLLQSDFVRLVIEDGIVRIEAIPDLAGCLSGYARGAPVENERAEAWEAELRERYQSD
>NC_018012.1|WP_041446977.1|2837982_2838393_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MSDISLIDANVILRYLLADHPELHLRSKTILDAVRTDGRRVLIPESVLAECVYVMQRIYQVPRAEIASKLAILLGFPGVTGEGLPILRQSLAIYADTNLSFVDTLIAAHAAARQQPVETFDKGLRRYLDLQLKSDV
>NC_018012.1|WP_014778959.1|2838604_2839000_+|septal-ring-lytic-transglycosylase-RlpA-family-protein
MTKTLTTAALLMTLLPIAFESQARPNPGHTQKGMASYYHDSLHGQKTASGQRYSKNRLSAAHKTLPLGTQIRVTDTLTGNSIVVRVNDRGPFVKGRIVDLSREAASELGMIKRGVTSVKLEVLSLPPRHDS
>NC_018012.1|WP_157174441.1|2839077_2839371_+|hypothetical-protein
MEAMFQAGFFYGLPGMDPIGIFRSANTVTGSINPMFWIPKTLYEALPYALLLFGGLAMLQASNPLMFGSGCLLAIVGAIIWRMRQTYRKRDRDEERL
>NC_018012.1|WP_014778961.1|2839385_2840408_-|ABC-transporter-permease
MWRRILAILVARNREFYRDRAGLSWNILMPIMMVLAFAFIFRAEPEDLLKVGVVTPDGQLTSVSSPFLDLEYIDFIPLTDPDAAIVKVERHQLDLLLDPRGSPVYWLNAESPKGYLAERLLLGAYPSRADPAPQRLTVSGEALRYVDWVLPGVLAMNIMFSSFWGVGWVIVRYRKNGVLRRLKATPLSPWEFLTAQVVSRLIVVLSASLVVYLGAALLLDFPMRGSYLALALVYLAGALCLISMGLIVAARLRTEEVADGILNLVSWPMLLLSGVWFSLEGASAAAQAFSRLLPLTHLVEGARRVMIDGAGVIDVLPQIILLGGLAVLFLSLAAWLFRWE
>NC_018012.1|WP_014778962.1|2840410_2841292_-|ABC-transporter-ATP-binding-protein
MTTLIEAHDLIRLYPGVRAVDGISFRVESGQCFGLLGPNGAGKTTTLEMLEGIQPPTSGCVLFKGHPLDREYRQSIGIQFQVTALQDFQTVSESLAMFASLYRRTAEREELIRLCNLDEILDRDTRKLSGGQRQRLLLAVALVNDPELVFLDEPTTGLDPQARRNFWGLIERVRRRGTTVVMTTHYMEEAERLCDRIVIVDRGRLIAEGNPRALIDAHFPARLIRLPDAAWPAGVPLPSGAVARDGEIEIQTDEVPPMLAELERLGADLAGLRVAIPNLEDLFLKLTGHALRT
>NC_018012.1|WP_014778963.1|2841489_2841744_-|molybdopterin-converting-factor-subunit-1
MIKILYFARLRERLGCHEERLELPAGVGTVADLLAHLRARGGLWTEALGEGERLMSAVNQAIAQPRTPLLEGDEVAFFPPVTGG
>NC_018012.1|WP_014778964.1|2841771_2843028_-|molybdopterin-molybdotransferase-MoeA
MTTHNDCPAPATEKRPTLTKQEAIDFLLSRVEPIADSESIPTDTALGRVLAAPVTSAIAVPGWDNSAMDGYAIRHVDLAAQDGWLRVSQRIPAGSTGVDLEPGTAARIFTGAPAPDGADTVVVQEICERDGDRVRIPLDCKAGANIRRAGEDIRAGAEVIAAGTRLAPQHLGLAASVGVARLPVYRRLRVAVLASGDELAMPGEPLGPGQIYNSNRFLLIGLLQGLGCEVVDLGIVADTLDATTDALTRGARESDLILASGGVSVGEEDHLKSAVEKIGTLDLWNISIRPGKPVAFGWVQGTPVLGAPGNPVSLFVTFCLFARPVVLRRQGTAGDLAPRVLKIRAGFDWPKPDKRSEFHRARLQTGDDGEPELAVFPTRSSAVLSSVAWADGLIEIPPGRAIRRGELVDFMPFADLLH

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Crispr_ID: NC_018012_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018012_11

3684693-3684802

Orphan

Consensus_repeat	Method
CGATTCGGGAACTGGCCGAACGCGGGCAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018012_11

>merge|NC_018012|11|3684693-3684802|CRISPRCasFinder
CGATTCGGGAACTGGCCGAACGCGGGCATTTCGGGCATGGCGGGGTGCTGGCCGAACTCAGGCATCGGCGGCATGTCAGGCCGATTCGAGAACTGGCCGAACGCGGGCAT

>NC_018012|11|11|3684693-3684802|CRISPRCasFinder
CGATTCGGGAACTGGCCGAACGCGGGCAT	TTCGGGCATGGCGGGGTGCTGGCCGAACTCAGGCATCGGCGGCATGTCAGGC
CGATTCGAGAACTGGCCGAACGCGGGCAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_018012.1\|WP_014779639.1\|3678619_3679417_+\|peptidoglycan-editing-factor-PgeF	unknown	unknown	gnl\|CDD\|182677
NC_018012.1\|WP_014779641.1\|3679970_3680474_+\|peptide-deformylase	unknown	unknown	gnl\|CDD\|223320
NC_018012.1\|WP_014779648.1\|3688223_3689003_+\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381594
NC_018012.1\|WP_014779646.1\|3686935_3687367_-\|DUF1841-family-protein	unknown	unknown	gnl\|CDD\|370177
NC_018012.1\|WP_014779640.1\|3679445_3679967_+\|amino-acid-binding-protein	unknown	unknown	gnl\|CDD\|225337
NC_018012.1\|WP_041447685.1\|3692582_3693242_-\|YihA-family-ribosome-biogenesis-GTP-binding-protein	unknown	unknown	gnl\|CDD\|234770
NC_018012.1\|WP_014779634.1\|3674139_3674586_+\|DUF29-domain-containing-protein	unknown	unknown	gnl\|CDD\|366774
NC_018012.1\|WP_014779635.1\|3674680_3676291_+\|NAD+-synthase	unknown	unknown	gnl\|CDD\|237577
NC_018012.1\|WP_014779636.1\|3676381_3676720_+\|P-II-family-nitrogen-regulator	unknown	unknown	gnl\|CDD\|223424
NC_018012.1\|WP_014779638.1\|3677658_3678639_+\|23S-rRNA-pseudouridine(1911/1915/1917)-synthase-RluD	unknown	unknown	gnl\|CDD\|183020
NC_018012.1\|WP_014779642.1\|3680602_3682702_+\|carboxy-terminal-processing-peptidase	unknown	unknown	gnl\|CDD\|236873
NC_018012.1\|WP_014779651.1\|3691506_3692337_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NC_018012.1\|WP_014779650.1\|3689698_3691186_-\|phosphomannomutase	unknown	unknown	gnl\|CDD\|100090
NC_018012.1\|WP_014779637.1\|3676716_3677544_-\|outer-membrane-protein-assembly-factor-BamD	unknown	unknown	gnl\|CDD\|274513
NC_018012.1\|WP_014779653.1\|3693250_3693736_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NC_018012.1\|WP_014779645.1\|3685453_3686851_-\|Si-specific-NAD(P)(+)-transhydrogenase	unknown	unknown	gnl\|CDD\|235373
NC_018012.1\|WP_014779643.1\|3682704_3684288_+\|glutamate--cysteine-ligase	unknown	unknown	gnl\|CDD\|235001
NC_018012.1\|WP_014779654.1\|3693735_3694284_-\|inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|179262
NC_018012.1\|WP_014779649.1\|3689152_3689599_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_041447060.1\|3687467_3688103_-\|endonuclease-III	unknown	unknown	gnl\|CDD\|182661

Protein	Function_ID	Function_description	E-value
NC_018012.1\|WP_014779639.1\|3678619_3679417_+\|peptidoglycan-editing-factor-PgeF	gnl\|CDD\|182677	PRK10723, PRK10723, polyphenol oxidase.	2.72213e-110
NC_018012.1\|WP_014779641.1\|3679970_3680474_+\|peptide-deformylase	gnl\|CDD\|223320	COG0242, Def, N-formylmethionyl-tRNA deformylase [Translation, ribosomal structure and biogenesis].	6.25366e-59
NC_018012.1\|WP_014779648.1\|3688223_3689003_+\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381594	cd00254, LT-like, lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	6.37758e-41
NC_018012.1\|WP_014779646.1\|3686935_3687367_-\|DUF1841-family-protein	gnl\|CDD\|370177	pfam08897, DUF1841, Domain of unknown function (DUF1841). This family of proteins are functionally uncharacterized.	1.12418e-71
NC_018012.1\|WP_014779640.1\|3679445_3679967_+\|amino-acid-binding-protein	gnl\|CDD\|225337	COG2716, GcvR, Glycine cleavage system regulatory protein [Amino acid transport and metabolism].	1.83219e-16
NC_018012.1\|WP_041447685.1\|3692582_3693242_-\|YihA-family-ribosome-biogenesis-GTP-binding-protein	gnl\|CDD\|234770	PRK00454, engB, GTP-binding protein YsxC; Reviewed.	3.53859e-101
NC_018012.1\|WP_014779634.1\|3674139_3674586_+\|DUF29-domain-containing-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	1.1586e-61
NC_018012.1\|WP_014779635.1\|3674680_3676291_+\|NAD+-synthase	gnl\|CDD\|237577	PRK13981, PRK13981, NAD synthetase; Provisional.	0
NC_018012.1\|WP_014779636.1\|3676381_3676720_+\|P-II-family-nitrogen-regulator	gnl\|CDD\|223424	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism].	1.15156e-56
NC_018012.1\|WP_014779638.1\|3677658_3678639_+\|23S-rRNA-pseudouridine(1911/1915/1917)-synthase-RluD	gnl\|CDD\|183020	PRK11180, rluD, 23S rRNA pseudouridine(1911/1915/1917) synthase RluD.	9.91207e-141
NC_018012.1\|WP_014779642.1\|3680602_3682702_+\|carboxy-terminal-processing-peptidase	gnl\|CDD\|236873	PRK11186, PRK11186, carboxy terminal-processing peptidase.	0
NC_018012.1\|WP_014779651.1\|3691506_3692337_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	8.83128e-06
NC_018012.1\|WP_014779650.1\|3689698_3691186_-\|phosphomannomutase	gnl\|CDD\|100090	cd03088, ManB, ManB is a bacterial phosphomannomutase (PMM) that catalyzes the conversion of mannose 6-phosphate to mannose-1-phosphate in the second of three steps in the GDP-mannose pathway, in which GDP-D-mannose is synthesized from fructose-6-phosphate. In Mycobacterium tuberculosis, the causative agent of tuberculosis, PMM is involved in the biosynthesis of mannosylated lipoglycans that participate in the association of mycobacteria with host macrophage phagocytic receptors. ManB belongs to the the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NC_018012.1\|WP_014779637.1\|3676716_3677544_-\|outer-membrane-protein-assembly-factor-BamD	gnl\|CDD\|274513	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO. Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). [Protein fate, Protein and peptide secretion and trafficking].	7.93594e-97
NC_018012.1\|WP_014779653.1\|3693250_3693736_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	9.14947e-90
NC_018012.1\|WP_014779645.1\|3685453_3686851_-\|Si-specific-NAD(P)(+)-transhydrogenase	gnl\|CDD\|235373	PRK05249, PRK05249, Si-specific NAD(P)(+) transhydrogenase.	0
NC_018012.1\|WP_014779643.1\|3682704_3684288_+\|glutamate--cysteine-ligase	gnl\|CDD\|235001	PRK02107, PRK02107, glutamate--cysteine ligase; Provisional.	0
NC_018012.1\|WP_014779654.1\|3693735_3694284_-\|inorganic-diphosphatase	gnl\|CDD\|179262	PRK01250, PRK01250, inorganic diphosphatase.	1.53196e-110
NC_018012.1\|WP_041447060.1\|3687467_3688103_-\|endonuclease-III	gnl\|CDD\|182661	PRK10702, PRK10702, endonuclease III; Provisional.	1.73666e-109

>NC_018012.1|WP_014779643.1|3682704_3684288_+|glutamate--cysteine-ligase
MNDSQATLERRIARLAAAGGSATFAGNRIGLEKEGLRVSANGGLAETPHPSALGAALTHPYITTDFSEALIELITPPLSSGQAALEFLKDIHCYVYRHLPDELLWGTSMPCILSRAGEIPLAQYGTSNAATMKTAYRRGLGNRYGRTMQLIAGVHFNFSFADAFWDLYQDQEAVAGERVGFRAEAQMGMIRNLQRIGWLVPYLFGASPAVCASFVQGRETDLQHFDADTLFDPHATSLRMGDIGYQNKQEEGTGIKANYDSLDAYVRSLTWAIQTPCPQYEAIGVKVGDRYEQLNANVLQIENEYYSTVRPKQITDWMEKPTLALRRRGIRYIELRSLDVNIFEPVGVGDEQLLFLDGLMLYCLLLGSPRIGARERRDIDENQVLTAHRGREPGLALVRDRHPVTLRQWAGEILAGMAAAAELLDGAANGPRSENLRRQQEKVDHPDLTPSARILETMRERREGFFAFSQRLAEEHRRDLRSSELSPERQALFDRLAVDSLRQQREIEAADDRSFDDFLDAYFAQGH
>NC_018012.1|WP_014779642.1|3680602_3682702_+|carboxy-terminal-processing-peptidase
MKQRLFRFLPVAMLLLAASAALAVPHPIPLSELFPNPGHTKSAIVINKVLERYHYRKVNLDKTFARQVLDKYLEALDPNRSFFLARDVERFENGARHLDDSLRRGDLDIAFDIFRVYRMRVDERVAHALKLLEGTFDFTRTESYAFEPADPRWATDSATLDDLWRKRVMNDFLTLRLADKPDAEIRERLQKRYEGLARRIHQFDGDDVFQTFMNAYTQTLEPHTSFMSPDTSENFDISMKLSLEGIGAVLRGDNEYTVVQSTVPGGPARDSGQIHTGDQIVGVAQGLDGPMEDVVGWRLEDVVDKIRGPKGSVVRLQLLSKASGSTGRAREISLVRNEIKLEDQAAKSFVVEDLANGPGLKIGVVEIPAFYRDFAAEGSGNRDFRSTTRDVRRLIDDLVARGVAGILIDLRGNGGGSLAEATSLTGLFIDTGPVVQVKDAFGKVDIEADTDAGVAYSGPLAVLVDRDSASASEIFAAAIQDYGRGLIIGEPTFGKGTVQTLIDLNRYVPGEANDLGRLRLTMAEFFRINGGSTQLRGVEPDIRFPSAEYLKEHGERSLDNALPWTRIQAAAYQGNGLVGVDLLTRQSAERIARDSGFKMLTERSKMMREIEEQTQVSLRETERRTADEQRERAFKNDQDSFLRARGITPVDEDAEQIDEDALDVQRKAIARIEVDEAARILIDGVLLERAKRPMAVMRD
>NC_018012.1|WP_014779641.1|3679970_3680474_+|peptide-deformylase
MAILDILKLPDPRLKQVSAPVERFDDELRAFVADLEETRQDGPAAVGIAAPQVGRFQRIVIVDVSGRPKTPNHGYLVLVNPEIVHWDGYAIGREGCLSVPDYTGNVIRATSIRLKTQDPDGREHEFAMEGYEARAVQHELDHLDGLLFVDRVVSRRTDLYRRKVYKT
>NC_018012.1|WP_014779640.1|3679445_3679967_+|amino-acid-binding-protein
MSDWNMLTLVGADRPGIVARVTRALYEVGCHLGEASMIRLGGNFTIMLMVRGEGSGREILDALAPVAGELGLRVHLDQVHGGLHQHLVPNFQVRVTGADRAGIVAEVTWILTNHGFNILELESDVAGDQERPIYIMNIQGFCAETLETLESALSPLVEQGVSVDVSPVDLLIG
>NC_018012.1|WP_014779639.1|3678619_3679417_+|peptidoglycan-editing-factor-PgeF
MELIRPEWPAPPWVRTISTTRDGGRSEGPFASLNLGDHVGDEPARVDENRARLLAQLGLSTEPYWLRQVHGRAIVRAGAASLNRDADGAVADTPGAACVVMTADCLPLLLCDAQGTRVAAVHAGWRGLAGGVVEAAVAALDIAPERLLVWLGPAIGPAAFAVGDEVRERFVAADARAAAAFRPGPRTGAGESPGSPWFADLFLLARQRLDRLGIERVYGGGDCTFSQPRRFFSYRRDGVTGRMASLIWLAPRDEDSARAQGANQA
>NC_018012.1|WP_014779638.1|3677658_3678639_+|23S-rRNA-pseudouridine(1911/1915/1917)-synthase-RluD
MNPAASESVRHAVRVDSALAGARLDQALAALLPEFSRSRLQQWIESGQVLVNDAPRRCRDKVWDGDAIRLDALLAASDACTAQDIALDLVHEDAHLLVINKPAGLVVHPAAGNPDGTLQNALLHHAPELAKVPRAGIVHRLDKDTSGLLVVARTLAAHKSLVEQLQARRVHREYRALAVGELVTGGRIDAPVGRHPTQRIRMAVVPHGRPAVTHYRVLERYPGHTLLGVELETGRTHQIRVHLTHLHHPLVGDRTYGGRPRPPRGCAAELTLELQAFPRQALHAIRLGLNHPASGEAMVWEIPIAPDLEALLDLFRREAKVGTDSP
>NC_018012.1|WP_014779637.1|3676716_3677544_-|outer-membrane-protein-assembly-factor-BamD
MPRTLTRLPVLLLVVALAGCGIFGKEIDPTEGWSAAKLYAEAASELDSSNYTRAVELYEKLESRYPFGRYAMQAQLDVAYAHYRAEEPEKAIAAADRFIKLYPQNPFVDYAYYLKGIVNYNRSVGFLDRYIPTDPSQRDPGSALDAFTDFSALVERFPDSKYSEDARQRMLYLRNNLARHEVNVARYYMRRGAYLAAANRANYVIERFQRTSAVEDALEVLIDAYRALDKPELAADATRVLELNRQAGRFVSDEPEPGEVDLARKLWEYLKLDEG
>NC_018012.1|WP_014779636.1|3676381_3676720_+|P-II-family-nitrogen-regulator
MKKVEAIIKPFKLDDVREALSAAGITGMTAIEVKGFGRQKGHTELYRGAEYVVDFLPKVKIELVLADEQVEGCINAITAAARTGKIGDGKIFVSEVTRVVRIRTGEEDEAAI
>NC_018012.1|WP_014779635.1|3674680_3676291_+|NAD+-synthase
MACRIQIAQMNPLVGDVAGNAARIVAESTRARVEGADLLVFPELALTGYPPEDLLLRPEFLRRVETALERIRAEATGITLVLGYPLQAVGGLFNVAGVLREGEVIAEYAKQHLPNYSVFDEKRYFQPGATPTVFEHRGLRIGLSVCEDIWHAGPTRQAAEAGAQLLLNLNASPFHAGKSEDREALVARRASDHGLTILYANLVGGQDELVFDGASFVADRAGRIVARAPGFEESVLTVDFDDAGTIVATSPAAMGPPPDEEAAIYDALVLGVRDYVRKNGFSGAVLGLSGGIDSALTLTIAVDALGPERVEAVLMPSRYTADMSNEDALEEAHLLGVATQIIPIEPAFRTFLEMLEPAFAGQPADVTEENIQARCRGVILMAISNKTGRILLTTGNKSEMAVGYATLYGDMAGGFAPIKDVPKMLVYRLARYRNTRSAAIPERVLTRPPSAELRPDQTDQDSLPSYEVLDAILRLYIELDEGVEAIVNQGYPAEVVRRVARLVDRNEYKRRQSPPGVRISERAFGRDRRYPITSGF
>NC_018012.1|WP_014779634.1|3674139_3674586_+|DUF29-domain-containing-protein
MTENLTYDADFHAWAMHNARLLRAGQIDQVDAQHLAEELEGMSASERRELLNRLQVLLLHLLKHQYQPERRGRSWLLTIVHQRTAIERLLEQSPSLKVLLDDENLAKVYGKAVREAVIETDLEPHLFPIGCPYSLEQMLDEDWLPESV
>NC_018012.1|WP_014779645.1|3685453_3686851_-|Si-specific-NAD(P)(+)-transhydrogenase
MATQDFDSIVIGTGPGGEGAAMKLAKAGQRIAVIEAHDAVGGGCTHWGTIPSKALRHSIQMLADYRRNPLFQHTQHQIEVEFPDLLRAADGVINEQVRTRYRYYQRNRVQVIFGHARFLEPDLLEVRRPGGLTDRLRAQHIVIATGSRPYHPPELDFSHPRIRDSDSVLALPHTPRSITIYGAGVIGCEYASIMSSLDVKVNLVDTRDRLLSFLDDEITDALSYRLRQQGVVIRHNETYRRVEAGADGVVLHCESGKKFKTDILLWANGRTGNTHDLGLDAIGLTPNQRGQLDVNASYQTALPHIYAVGDVVGAPALASASYDQGRFVGAHIADGDCDWSLIEEFPTGIYTVPEISSIGRTERELTASQIPYEVAQADFKSIARAQITGHTVGMLKLLFHRETLEILGIHCFGEQAAEIVHIGQAIMSQRGAANTIRYFTETTFNYPTMAEAYRVAALNGLNRLF
>NC_018012.1|WP_014779646.1|3686935_3687367_-|DUF1841-family-protein
MFSSDRNSHRDVFIQAWKKARAEQPLEPLERQIVGILRQHPEYQPFLEAEDSALERDFPPEQGEANPFLHLGLHMVILEQLSIDQPAGIRKLYRNLARRTGDAHEAEHRIMACLAESLWKLQHDRQPFNENDYLDCIRRAGRV
>NC_018012.1|WP_041447060.1|3687467_3688103_-|endonuclease-III
MNKEKRHRIFERLRNANPAPTTELMYETPFELLIAVILSAQATDRSVNKATASLFPLARTPAEILALGEEGLKSHIRTIGLFNSKARNILKTCAILIAEHGGEVPRERKALEALPGVGRKTANVILNTAFGEPTIAVDTHIFRVANRTRLAEGKTPLAVEQQLLRHVPKPFQKDAHHWLILHGRYVCVARTPHCPHCIIADLCEFPDKRPD
>NC_018012.1|WP_014779648.1|3688223_3689003_+|lytic-transglycosylase-domain-containing-protein
MIYSFSSVLLLLLLLAPTVAWSTPKDQSQPANVAETVDAAPPRPALPYPPNRTRPSRAQVAALIPAVASRYGVEEALVRAVVAAESNYNAHAVSSAGAVGLMQLMPATASDYGVSSADALFDPQTNLRTGTRHLKRLLNKYNNDYGRVIMAYNAGEGVVDRTNSQVTYLETLNYTEAVINNYRRHGGTAPTQAALKQVRTLRGVRNTGKARRLLKKYLDPSLLSLNVKPTLSARYLDPSLHEVGPKSKPMFELETSVIR
>NC_018012.1|WP_014779649.1|3689152_3689599_+|hypothetical-protein
MNPTLQKLRELAQESVLIAQDSELKERHVYSSCAQLAAPLIRAFKDVENEYVRISVLRQIWPDDYDRRDDRVSGLLMSMPGPERAPYGLKLAMPHGFLSFEATLRKDGSPVFTCIRETDGQRPLSMDFPDSEHWLEYFYKIVADVVEL
>NC_018012.1|WP_014779650.1|3689698_3691186_-|phosphomannomutase
MRIGDLMNESGVKFGTSGARGLAADMTDWVCYAYTAGFLGYLKTAGILVSGQEVGIAGDLRPSSPRIMNACAAAVLDLGCRPRNFGSIPSPALVVHGMARGMPTLMVTGSHIPDDRNGIKFNLPTGEILKRDEEGISLQEVRRPEGLFDALGGFAVGQGAALPDPDPIAYREYVDRYLGFFPANCLRGLRVGVYEHSSVAREAYVEVLAGLGARVDRLGYSDVFIPVDTEAIRPEDVVLARDWAASGQFDALVSADGDGDRPLIGDETGAWLRGDIAGVLCARQLGARGVVTPVSSNTAVEKCGCFASVRRTRIGSPFVIEGMLQTMDEGLTPVVGYEANGGFLLGTDIERDGRVLAALPTRDAVIVAVTILLAAVEQGKPLSALARDLPGRFTHSDRLKDFPTEIARAGIAALSSGDVQRDKAAIEAAFGVRFGAVADLDTTDGLRMTFVSGEIAHLRPSGNAPELRAYTEADSPERAAEMNRICMEILAGWRG
>NC_018012.1|WP_014779651.1|3691506_3692337_+|hypothetical-protein
MTVTKPFLPLASSAALVLALTQTLSAPSATAAEPQPAPTKAAEPAAPAPYPASAKPADATPTPAETARAEAKERRAAMLAERKKRYDELRASAAEMGVEMPESPPWETLPEMAVPHDMRNEDNAAMNQWREDMRARMQERMRAITPEERQAMREERWKRMRADAAERGIEMPETPPWEEAEKRRQEMEKRFEEYRKTVEQMTDEQREAAQALFGRTPERMSRPMPYPDAGPAQESWGYPGDGAYRNAPRGMMHPHMMPYPEAPGYDQGPPPWSTGN
>NC_018012.1|WP_041447685.1|3692582_3693242_-|YihA-family-ribosome-biogenesis-GTP-binding-protein
MNPFYQRAHFLTAATRLDQTPADSGREVAFAGRSNAGKSSAINTLCHQKSLARTSKTPGRTQQIIFFELDAERRLVDLPGYGYAKVSEAIKLQWQQHLANYLEYRRSLAGLVIVMDIRHPLTEFDRRMLDWGRRGERSILLLLTKADKLKRGAAQATRLAVEREVANDDGRVAVRLFSALERQGVETVQGLLDRWLEVPDPNLVDSAADSVTGIGSSRS
>NC_018012.1|WP_014779653.1|3693250_3693736_-|cyclic-pyranopterin-monophosphate-synthase-MoaC
MPLTHFTPAGEAHMVDVGGKAVSRRCAVAEGWIRMEAATLALIESGGHAKGDVLGIARVAGIMGAKRTADLVPLCHPLSLTRAEIDLAIRAEDGSVYCRATVETTGQTGVEMEALCAVQVSLLTIYDMCKAVDRGMTISNVRLLEKAGGASGHWIRDPSLT
>NC_018012.1|WP_014779654.1|3693735_3694284_-|inorganic-diphosphatase
MDLSKVSRGDNVPNIINVIIEIPSHAEPVKYEMDKETGAMFVDRFMSTAMHYPCNYGYVPHTLSSDGDPVDVIVVTPYPLISGSVIKCRPIGVLTMTDESGDDAKILALPVDKLFKGYRNVESFRDMPPHLLDQIAHFFEHYKDLDEGKWVRVGGWGGRDEACQEIMASVEMFENAPEKPAF

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Crispr_ID: NC_018012_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018012_12

3895246-3895334

Orphan

Consensus_repeat	Method
GCTCCCTATGGCTACGGCGGCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018012_12

>merge|NC_018012|12|3895246-3895334|CRISPRCasFinder
GCGCCTTATGGTTACGGCGCTCCCTATGGCTACGGCGGCCCAGGCTATGGCGCTCCTGGCTATGGTGCTCCCTATGGCTACGGCGCGCC

>NC_018012|12|12|3895246-3895334|CRISPRCasFinder
GCGCCTTATGGTTACGGCGCTCC	CTATGGCTACGGCGGCCCAGGCTATGGCGCTCCTGGCTATGGT
GCTCCCTATGGCTACGGCGCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_018012.1\|WP_014779834.1\|3906518_3906698_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014779824.1\|3893002_3894577_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341039
NC_018012.1\|WP_014779826.1\|3895834_3896614_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014779815.1\|3881874_3883326_-\|TRAP-transporter-large-permease-subunit	unknown	unknown	gnl\|CDD\|227010
NC_018012.1\|WP_014779820.1\|3887119_3888904_+\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|238742
NC_018012.1\|WP_014779827.1\|3896694_3898893_+\|sodium-translocating-pyrophosphatase	unknown	unknown	gnl\|CDD\|376979
NC_018012.1\|WP_014779816.1\|3883327_3883861_-\|TRAP-transporter-small-permease-subunit	unknown	unknown	gnl\|CDD\|227011
NC_018012.1\|WP_041447717.1\|3899669_3900017_+\|FUN14-domain-containing-protein	unknown	unknown	gnl\|CDD\|368198
NC_018012.1\|WP_083845775.1\|3904438_3904780_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NC_018012.1\|WP_041447070.1\|3884645_3885839_+\|magnesium/cobalt-transporter-CorA	unknown	unknown	gnl\|CDD\|213362
NC_018012.1\|WP_014779831.1\|3901175_3901907_-\|carboxy-S-adenosyl-L-methionine-synthase-CmoA	unknown	unknown	gnl\|CDD\|273244
NC_018012.1\|WP_014779832.1\|3902045_3904289_+\|polyphosphate-kinase-1	unknown	unknown	gnl\|CDD\|235469
NC_018012.1\|WP_014779830.1\|3900013_3901003_-\|tRNA-5-methoxyuridine(34)/uridine-5-oxyacetic-acid(34)-synthase-CmoB	unknown	unknown	gnl\|CDD\|273084
NC_018012.1\|WP_014779833.1\|3904801_3906322_-\|exopolyphosphatase	unknown	unknown	gnl\|CDD\|223326
NC_018012.1\|WP_014779819.1\|3885908_3886904_+\|acyltransferase	unknown	unknown	gnl\|CDD\|224748
NC_018012.1\|WP_014779828.1\|3899025_3899340_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014779821.1\|3889092_3890595_+\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|379243
NC_018012.1\|WP_014779817.1\|3883884_3884442_-\|cytochrome-b	unknown	unknown	gnl\|CDD\|225580
NC_018012.1\|WP_014779814.1\|3880751_3881843_+\|TRAP-transporter-substrate-binding-protein-DctP	unknown	unknown	gnl\|CDD\|270400
NC_018012.1\|WP_041447716.1\|3890800_3891472_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_018012.1\|WP_014779824.1\|3893002_3894577_+\|MFS-transporter	gnl\|CDD\|341039	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily. AmpG acts as an inner membrane permease in the beta-lactamase induction system and in peptidoglycan recycling. It transports meuropeptide from the periplasm into the cytosol in gram-negative bacteria, which is essential for the induction of the ampC encoding beta-lactamase. The AmpG family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.7528e-47
NC_018012.1\|WP_014779833.1\|3904801_3906322_-\|exopolyphosphatase	gnl\|CDD\|223326	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism].	4.32206e-155
NC_018012.1\|WP_014779815.1\|3881874_3883326_-\|TRAP-transporter-large-permease-subunit	gnl\|CDD\|227010	COG4664, FcbT3, TRAP-type mannitol/chloroaromatic compound transport system, large permease component [Secondary metabolites biosynthesis, transport, and catabolism].	0
NC_018012.1\|WP_014779820.1\|3887119_3888904_+\|substrate-binding-domain-containing-protein	gnl\|CDD\|238742	cd01465, vWA_subgroup, VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the VWA domain in these proteins. The members do have a conserved MIDAS motif. The biochemical function however is not known.	4.73019e-16
NC_018012.1\|WP_041447717.1\|3899669_3900017_+\|FUN14-domain-containing-protein	gnl\|CDD\|368198	pfam04930, FUN14, FUN14 family. This family of short proteins are found in eukaryotes and some archaea. Although the function of these proteins is not known they may contain transmembrane helices.	2.46366e-15
NC_018012.1\|WP_014779816.1\|3883327_3883861_-\|TRAP-transporter-small-permease-subunit	gnl\|CDD\|227011	COG4665, FcbT2, TRAP-type mannitol/chloroaromatic compound transport system, small permease component [Secondary metabolites biosynthesis, transport, and catabolism].	2.52499e-61
NC_018012.1\|WP_083845775.1\|3904438_3904780_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	2.46818e-17
NC_018012.1\|WP_041447070.1\|3884645_3885839_+\|magnesium/cobalt-transporter-CorA	gnl\|CDD\|213362	cd12828, TmCorA-like_1, Thermotoga maritima CorA_like subfamily. This subfamily belongs to the Thermotoga maritima CorA (TmCorA)-family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of this subfamily are found in all three kingdoms of life. It is functionally diverse subfamily, in addition to the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, it includes Methanosarcina mazei CorA which may be involved in transport of copper and/or other divalent metal ions. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by a related protein, Saccharomyces cerevisiae Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	7.99147e-144
NC_018012.1\|WP_014779830.1\|3900013_3901003_-\|tRNA-5-methoxyuridine(34)/uridine-5-oxyacetic-acid(34)-synthase-CmoB	gnl\|CDD\|273084	TIGR00452, methyltransferase_putative, tRNA (mo5U34)-methyltransferase. This model describes CmoB, the enzyme tRNA (mo5U34)-methyltransferase involved in tRNA wobble base modification. [Unknown function, Enzymes of unknown specificity].	0
NC_018012.1\|WP_014779827.1\|3896694_3898893_+\|sodium-translocating-pyrophosphatase	gnl\|CDD\|376979	pfam03030, H_PPase, Inorganic H+ pyrophosphatase. The H+ pyrophosphatase is an transmembrane proton pump involved in establishing the H+ electrochemical potential difference between the vacuole lumen and the cell cytosol. Vacuolar-type H(+)-translocating inorganic pyrophosphatases have long been considered to be restricted to plants and to a few species of photo-trophic bacteria. However, in recent investigations, these pyrophosphatases have been found in organisms as disparate as thermophilic Archaea and parasitic protists.	0
NC_018012.1\|WP_014779832.1\|3902045_3904289_+\|polyphosphate-kinase-1	gnl\|CDD\|235469	PRK05443, PRK05443, polyphosphate kinase; Provisional.	0
NC_018012.1\|WP_014779821.1\|3889092_3890595_+\|substrate-binding-domain-containing-protein	gnl\|CDD\|379243	pfam13531, SBP_bac_11, Bacterial extracellular solute-binding protein. This family includes bacterial extracellular solute-binding proteins.	0.00146945
NC_018012.1\|WP_014779819.1\|3885908_3886904_+\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	1.21711e-12
NC_018012.1\|WP_014779817.1\|3883884_3884442_-\|cytochrome-b	gnl\|CDD\|225580	COG3038, CybB, Cytochrome B561 [Energy production and conversion].	6.3134e-36
NC_018012.1\|WP_014779814.1\|3880751_3881843_+\|TRAP-transporter-substrate-binding-protein-DctP	gnl\|CDD\|270400	cd13682, PBP2_TRAP_alpha-ketoacid, Substrate-binding component of an alpha-keto acid binding Tripartite ATP-independent Periplasmic transporter and related proteins; contains the type 2 periplasmic-binding protein fold. This subgroup includes TRAP transporters that bind to ketoacids such as pyruvate and alpha-ketobutyrate, xylulose, and other unknown ligands. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NC_018012.1\|WP_014779831.1\|3901175_3901907_-\|carboxy-S-adenosyl-L-methionine-synthase-CmoA	gnl\|CDD\|273244	TIGR00740, tRNA_cmo5U34-methyltransferase, tRNA (cmo5U34)-methyltransferase. This tRNA methyltransferase is involved, together with cmoB, in preparing the uridine-5-oxyacetic acid (cmo5U) at position 34. [Unknown function, Enzymes of unknown specificity].	5.45235e-77

>NC_018012.1|WP_014779824.1|3893002_3894577_+|MFS-transporter
MTQPATAYHSWRESLVSLRHPRVISMLFLGFSAGIPLLLIFSSLSLWLREAGIERNAVTFFSWAALAFSFKFVWAPLIDRLPVPFLTRWFGRRRAWLLVAQTSIIAAILFMALTDPSTGADSLTRMALAAVLLGFSAATQDIVIDAYRIESAAPRLQALMSSTYIAGYRIGMVVAGAGALYLADLFGSDAGAYNYGAWRMTYFVMASTMLVGLITTLTIREPETDRSADLHYAPTDYLRLLAVFAVTAATFAMVFFLGDAPFTGLKTAAGGGVLTGFLLEMLHFALAVSAGVLIGWMLVKLGAINRVMARETWVEPALDFFRRYGLKTALLLLALIGLYRISDIVLGVISNVFYQDLGFTKSQIATAVKTFGVFVSIAGGLLGGLLATRYGVMRILMVGAILSSAAQLIFIALANAGANLVLLYIAVGADNLVAGLASAAFVAFLSSLTSVSFTAVQYAIFSSLMTLLPKLLGGYSGTIVNGIGYPGFFIFTSLIGIPVIGLVWLAGKRLAIADRARMASGAKN
>NC_018012.1|WP_041447716.1|3890800_3891472_+|hypothetical-protein
MIDKRPLKSTLFAGLFALLATAPMLQAAGFGDFLKQMGGFSFGGTEFDPQEMAGNQKNWADRERWVKEALDHAYQALARSDTDVNLFDFQNYYNVLGIQWNPEYLTDPANIGNLNAYATFTEYLSRYLKVKQDLITKLAELNRHYAVLKQVDPRQLTGPFQLNTGAQPQSYTQQAASSVDATAHQAALATSAGAVEKYTAELNRAIDYGIKLESHFKQAAGIP
>NC_018012.1|WP_014779821.1|3889092_3890595_+|substrate-binding-domain-containing-protein
MLPALHPSRIENPAGFRHAPFARLIFPVLFLIGGLFATPMLPAAEKLFDFGDLNVDLSKVQAKPGAAEAAKQSPAQQMPSTPESPAPAVLPRDGQESIGETVRSQAIKVKTVEVPAGKTAQQAIVYPVPENRSVIEVKIAAGSEKKDWLEEAARRFMADPALRQLDGKPIRLVIDKIGSTESASLLIEGKTLHGGRNEYQVWAPASSIFRGLVEDAFTGGKLFETDESIARSPMVFVTWEPVQQAIDQKIQKSMSFDTITELFSRELGGETIDPNGRNFQFGFTRPRDSNSGAVALIAMAYEFFAKDRGRYRIRLEDLQNPDFQAYLAFIKYMSDQTKDSTGKLAEPMMQAGYGGQPLSSVYVYENLGVKLAFIRRVNDPNGARPIIRYPKYNLISDHPYYTLRHGNSREQVEAARRFKDYLLTRDIQLLALQREGFRPVSTEISNQEMSEVLGDFVDAHGLVPDLIKASQILIPAQSGEVIMALIRTYQELGDPVGPNF
>NC_018012.1|WP_014779820.1|3887119_3888904_+|substrate-binding-domain-containing-protein
MLTGVLRFPIAVAGTVSFLVLISLSVSAADQENVCLPAANQALVRFTYGSEKQPWIHEVTETFNRQAQKTASGKTICVNAVPKGSGDSVNEIKNGQAGPGEVHATSPASDLYVNLINHEFTEEQGKDLLKVEGFLVSSPVVIAAWEPVLARLGPPDQIGWSEIFKRSGDGGFRYGQTSPEQSNSGLSALVAQFYAGAANEAGRPVPRLSLARIEDPKVREFVAKVHESVIHYGRSTGFYAEKMRSGGPEYADTVVIYESDVIQANNHIRDQGLKYPKLVAIYPREGTFATNHPFTIVKRDWVDADEEDGAKRYFAYLMAPETQAKALQYGFRPSVPLDIDPKVYGIVWNPDNGVQPFDTVHRFLATPGGNVIQAIRDAFRAIKNHSHVVLVIDRSGSMDARLFDTERGMERSRMEMAVESANLLAQTLQDKDRLSLLFYDYKVQYSDLTPKGQPLAMDAAGKERLAETLAKVRPAGGTAMRSAIETAWRDLCETIKKNPSDRAIRLMVVLTDGVDNASKISDADLIQRIGFALPDGHGGYLGDAACKIPVFGIAFGGEADDSSLKAIGNAAGGETRRGDSAEIREIFKRFSDLL
>NC_018012.1|WP_014779819.1|3885908_3886904_+|acyltransferase
MANPAASAHSRNQGVDFLRAICILYVVGYWHLIPYTTALPGYANWFTEGLKYAALATFVFCSGYLLGRQAITLDPRGLWSFYRRRLLRIYPLYLLALILFGAFGIASQKQVVDGALLVSMFRPPAMPTLWFVTMIMVFYLIAPLLIRFAHRPAVTVLIGGGLLMALIVQHLWIRHLDLRILLYLPVFVLGILYQRHASLGTLAKRHEWILLGLLILLLPLSVTGNEWSLRGTFLLMPLILVSAPALFLLADRIADRLHGPTIEFLAYASFGLYLFHRLIFKAAIAVFYPATGWEQVLYLLMVALPLSLLIGYGLQRVYDGLVSRLSAGRRM
>NC_018012.1|WP_041447070.1|3884645_3885839_+|magnesium/cobalt-transporter-CorA
MTRQAGNPPRSPRTSPKSANARPKPVGHKHAKRAARARLPRSKRAPPGLAAGIEYHELLQTPPDHPARVFCTDYSPERIQSQEVTDIAAFLAVHRPAWSQVRWIHVEGLRDQGVIRAIAEKYQLHPLAIEDVLHAGHRPKLEDFPAIGELPGRLFVIARSIRLTEDHQMLAEQIGCFLGRTTLLSFQQNSSPAIDQIQRRLENPLSRVRQHDASFLLYALIDALVDCFFPVLDASSERLETAEEDVLTQPQMQSLHAMHLIKRDLVMIRRAAWPMRELVSQLQRERHECLSEIAQTYFRDVQDHCVQIIDLIETYREIASAVTETYVSVVSNRTNDIMKVLTIIGTIFIPLTFLAGVYGMNMPIPENAWRFSYPVFWAVCLVIAGFMLWRFRRGGWL
>NC_018012.1|WP_014779817.1|3883884_3884442_-|cytochrome-b
MNQNPTLQRYNLLSQLFHWLVVALIIGLIVTNTLHQGAPDPSDLRVSSIKLHISLGILLFLVTIARILWTRISPQPALIDGPQWTLAAARLTHLALNLATLLIPIFGYLRVVSKGRVAEFFGTPIPSIIGESPWLNDMMHILHGEPMEIFLYVLVGLHVAAALWHQYVRRDGSLERMLPWGGRSA
>NC_018012.1|WP_014779816.1|3883327_3883861_-|TRAP-transporter-small-permease-subunit
METLLRLSAIIDTFNRRLGRATVWLILATVLLSALTATLRYLLDWGSNAMIEAQWFLFGLVFLLCAPWTLQEQGHVRVDILYGRLPPRWRVGIDILGGLLFLLPVCLLIVVDAWGYFLISFHQNELSMNPGGLLWWPMKLAIPVGFALLGAQGLSEVIKGIAALTGHRPLPDHKGGH
>NC_018012.1|WP_014779815.1|3881874_3883326_-|TRAP-transporter-large-permease-subunit
MEAWLAANLAPIMFAALVLFLLIGYPVAFSLAAVGMLFGLIGIELGMLTPALLQALPDRVFGIMRNEILLAIPFFTFMGLVLERSGMAEDLLETVGQIFGGIRGGLAYAVIVVGALLAATTGVVAASVIAMGLISLPIMLRYGYHKPLATGVIAASGTLAQIIPPSLVLIVMADVLGRSVGDMYKGALLPGLLLTGFYLLYVFGITLWRPQYAPALPVEARTLRGRALAWRVAIALIPPLALIFLVLGTIFIGWATPTEGGAMGAVGALLLAAAKGRLTLDMLRQSMTTAAKITSFVVFILIGSSVFSLTFRGVDGDLWVEHLLTGLPGGALGFLVFVNLLVFLLAFFLDFFEIAFIVLPLLAPVAAAFGIDLVWFGVLLAVNMQTSFMHPPFGFALFYLRSVAPPQIRTADIYWGAVPFLGLQVLMVILIIAFPQLVSWGLDSPTSKLTPAEVTLPDQGGSSLLDNDDFGGLFETPPGDGAP
>NC_018012.1|WP_014779814.1|3880751_3881843_+|TRAP-transporter-substrate-binding-protein-DctP
MQRRDFLKSASVGAVAAGLAMPARAATESPAIKWRMASSFPKSLDTIYGGAETLAKRVAELTDGRFEIRVFAGGELVPAFGVLDAVQQNTIECGHTASYYYYGKNKALALETTWPFGLNTRQMTAWVHEGGGMELLRAMFAEYGIVQFPGGSTGAQMGGWFRKEINTLADLQGLKIRIPGFGAEIFSRMGAVPQSLPGGEIYPALERGAIDAAEWTVPYDDEKLGFHKVAKYYYYPGWWEPGTHLVFYVNKAQWESLPTSYRAAFEVASREAHLTMLAAYDAKNPPALQRLMRDGAELRRFPDDVLLKSYEIAQEIYAEESARNPTFKTLYESMLAFQQSSDAWWNVAESSMANFMRAVQRRK
>NC_018012.1|WP_014779826.1|3895834_3896614_+|hypothetical-protein
MTDKHLYLSLIPQALIASMLKPEEFGSYYAVGTKVHVQGEAIFFEVDPSFRSDDFPFQLADERCVPKPDGSPKNSVYLSIYRVLSRVPVAALGNLYLVTNDGKTLELQREEYQPHPSERLHLYQEFCPITPMVASRLEPHEFSDFITNPTNPVHVPRIVFSELNLGELADNPEHGSTDDIPYSNIDHLRDVLLELTNNHGKPSKLVLKQVKEGVIYRMVQGGFYVGDQNDFAYYRFPDLAELEDRYRGWWRSAQVTGLE
>NC_018012.1|WP_014779827.1|3896694_3898893_+|sodium-translocating-pyrophosphatase
MNEIVFWIAPIAAIAALVYARGFYKEMIRQDQGTALMQEIGGHVSRGAMAYLWQQYKIMLVVFAALAVVFAVLAYQFHVQSTWLPVTFLCGGFFSALAGYFGMKTATQASTRTAAAARTSLPDALRIAFRSGAVMGLVVVGLGLGNIVFWFILANLLIPAGDTGETHRMVLITTTTLTFGMGASLQAMFARVGGGIFTKAADVGADLVGKVESGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGSILAASALGAAAFMHDPALQMKAVVAPIMIAGLGILLSILGVYLVKTEEGANQKQLLDALGRGINSSAAMIVVVSLAFLFLLGMPNVWGIWGAVIAGLVSGVIIGRSTEYYTSPSYSPTRQIASQAEGGAATLVIAGIGVGMLSTAIPVLTVGAGTLLAFLFASGFDPSQMNQGLYGVGIAAVGMLSTLGITLASDAYGPIADNAGGNAEMSGLGPDVRARTDALDALGNTTAATGKGFAIGSAALTALALLASYVEVVRMELIKIGTTVLTLGHGTTVPTDTATLTDFMTYYSVNLLNPTVLVGVLIGAMVAFAFSGMTVQAVGRAALLMVEEVRRQFREDAGILKGTSQPDYERCVAISTLGAQREMVVPALIAVIAPVVTGLLLGVAGVIGLLVGGLSSGFVLAVFLSNSGGAWDNAKKHIEAGHHGGKNSRAHRAAVIGDTVGDPFKDTSGPSLNILIKLMSIVAIIMAGVTVTYSLL
>NC_018012.1|WP_014779828.1|3899025_3899340_-|hypothetical-protein
MKCAMLMTGSGPIVILTSYDSLENPDLLERLANKGIPKFMAYEIPLALAEERYGGHFRKVTNGFRESDSLRVLDHNGHRAFYLFKFEELGTPLAHEGSLEDHHH
>NC_018012.1|WP_041447717.1|3899669_3900017_+|FUN14-domain-containing-protein
MPDPIAPDHAGSAGELFTESFFLTLGFSFMIGLAMGFALKVAFKIALLVIGLMLLGVFGLQYAGLVDINWSGVEAHYDGWMAWLGAFAGVFFAFVGDNLTSGASFLAGLALGLKY
>NC_018012.1|WP_014779830.1|3900013_3901003_-|tRNA-5-methoxyuridine(34)/uridine-5-oxyacetic-acid(34)-synthase-CmoB
MSDGTRFNFQPFLARLAQTPLAPWGDALAEAVRIRLGPGAHGDLARWDAALSDLPELPDGERVLDRACVGIQSGNPLDPETERQLRDALMRLHPWRKGPYCIHGVRIDTEWRSDWKWDRLANAIAPLDGRRVLDVGCGNGYHGWRMLGAGAELVLGIDPTLLFVAQYLAIQRYLTRDELTVLPLGIEDLPGGLTGFDTVFSMGVLYHRRSPMDHLGELCRLLRPGGELVLETLVLEGGDERVLVPPGRYASMRNVWFIPSVAALSVWLGRCGFTAIRVIDVSRTTVEEQRPTDWMRFQSLPDHLDPHDPNRTVEGLPAPTRALLLAERR
>NC_018012.1|WP_014779831.1|3901175_3901907_-|carboxy-S-adenosyl-L-methionine-synthase-CmoA
MTINASDDLFDRPDAPISPFRFDADVARVFPDMVRRSVPGYAELIGITGLIARRVARPGTRCYDLGCSLGAVTREILARTGPEVRIVAVDNAPAMIAGLRARLADLPGRERVELFHADVEEAPIEQASLVVLNLTLQFVAPERRLELLERIRAGLVPGGALILAEKILVPSDRGGDLLTALHEDFKRAQGYSDLAISRKRAALEQVLLPDSVETHEQRLAAAGFAGFARWYQSLNFVAWVAWA
>NC_018012.1|WP_014779832.1|3902045_3904289_+|polyphosphate-kinase-1
MSTSALQPEVDDDLHDDDAQFGTEAETMPPIPDDIDLDDPSLYLNRELTWLAFNRRVLHEADDPRTPLLERVKFLAIVSNNLDEFFMKRIGGLKQQIAAGVHTPSLDGRTPLQQLKECQAAARVFQAQQQCIYDVLMEELAGQDIRITHHDELPTDARERLREHFRANIFPMLTPLAMDPAHPFPFISNLALNLLVTLRFPGGLEVYMARVKVPVSKDVSKRLIPVDGSHTYVTLEDLIVNNLDMLFPGMEIVSCALFRVTRNAIVEPDAEAANDLLEMIETELRERHFAPIVRLEVQPGMEPTHRGMLAAELGLNEDEDVFEVEGMMALRDLFELAGIDKPELHDKPHRPVDHPLLANDRRNIFHIVRENGPILLQHPYQPFSTTVERFLRTAAEDPKVLAIKMTLYRTSAGAILDSLIEAARNGKQVAVLVELKARFDEAANIGWARRLEAEGIHVNYGVMGLKTHSKLIFIVRRDYAQLRRYYHIGTGNYHAGTAKLYTDLGMLGCDEDIGQDLTELFNYLTGYSPPPSYRKILAAPYNLKRGIVDKINREIEQHKRNGDGLIQMKMNALEDADITRALYKASRAGVQVDLIIRDTCRFRPGLPGISEKARVVSIVGRFLEHGRIIYFRNGGEEEYYIGSADMMGRNLDSRVEVHAPVENPELRQELRLILDVQFADTRSAWDMDADGNYTQRTPEDDSTKGAQETLIGVAEKRLAAAAKHKEKKVRSKLLSHFQWRLRDRNLT
>NC_018012.1|WP_083845775.1|3904438_3904780_-|Uma2-family-endonuclease
MSARPIPCHEVHSLSQVAHRDACYDDILALPEYLVGEILSPSTAKIDRAINMPLYAREGVAHLWLVDPSARTLEVYALQDNRHWLLLDTLKEVDSVRQPPFDAIAFSLGHLWA
>NC_018012.1|WP_014779833.1|3904801_3906322_-|exopolyphosphatase
MPEEFNQATDNPPREIVAAVDLGSNSFHMIVAQLDDGHMRITDRLREMVRLGEGLGEDKSLAPEVAERALACLERFGQRLRAFPAGSVRAVGTNTLRQLRPDTGFVERAEAALGHPIDVIAGREEARLIYLGVAHGLAAGSERRLVVDIGGGSTEIIVGQGFSPRLRESLHMGCVSLSRKYFSDGRIAAKSMQKAELAGALEVRPIRELFRRTGWRKAVGSSGTIRSIAAVVNAEGWCDDGISAESLTRLSRALVEAEKTSNITLKGLTEERKPVFAGGVAVLRSVFDALGIEHMQVSDYALREGVIYEMMGRHQHEDVRERTVATLCRQFQIDPVHGRRVQATALVVYRQLATPWALNDPDHPLMLSWAARLHEIGVMVAHSQYQKHGAYLLRNADLAGFSRQEQMVLAALVLGHRRKFPVQEFAALPKAEQACARRLCVILRLAALLHRGRSAANKPSPTLLADGERLALSFPDDWLARHPLTQLELEQEAERLASAGILLTFS
>NC_018012.1|WP_014779834.1|3906518_3906698_+|hypothetical-protein
MLDTENSYGQEVNERIPPMTAQESRGQAASLDIRRRIEHMREIKRLRELLDDPEFDELS

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Crispr_ID: NC_018012_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018012_13

4763203-4763358

Orphan

Consensus_repeat	Method
CCAGCCGGGAACCGGAGCCGTCCGGGTCCGGGTTGGCCTCGCTCGGGGAACCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018012_13

>merge|NC_018012|13|4763203-4763358|CRISPRCasFinder
CCAGCCGGGAACCGGAGCCGTCCGGGTCCGGGTTGGCCTCGCTCGGGGAACCGAAGCCGTCCAGGGATCCAGCCCAGCCGGAAGCCGTGGCCCTGGTCAAGATCCAGCCGGGAACCGAAGCCGTCCGGGTCCGGGTTGGCCTCGCTCGGGGAACCG

>NC_018012|13|13|4763203-4763358|CRISPRCasFinder
CCAGCCGGGAACCGGAGCCGTCCGGGTCCGGGTTGGCCTCGCTCGGGGAACCG	AAGCCGTCCAGGGATCCAGCCCAGCCGGAAGCCGTGGCCCTGGTCAAGAT
CCAGCCGGGAACCGAAGCCGTCCGGGTCCGGGTTGGCCTCGCTCGGGGAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_018012.1\|WP_083845831.1\|4756291_4756537_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NC_018012.1\|WP_014777832.1\|4755133_4756099_+\|ExeA-family-protein	unknown	unknown	gnl\|CDD\|225806
NC_018012.1\|WP_014780573.1\|4770222_4770492_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780574.1\|4770484_4770751_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780570.1\|4768501_4769266_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379165
NC_018012.1\|WP_014780571.1\|4769265_4769892_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780557.1\|4753490_4755128_+\|integrase	unknown	unknown	gnl\|CDD\|366234
NC_018012.1\|WP_157174533.1\|4760988_4761687_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780559.1\|4756816_4757242_+\|DNA-primase	unknown	unknown	gnl\|CDD\|273595
NC_018012.1\|WP_014776775.1\|4752862_4753465_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
NC_018012.1\|WP_014780563.1\|4761683_4761848_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780564.1\|4761834_4762425_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780572.1\|4769884_4770226_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376540
NC_018012.1\|WP_014780567.1\|4765389_4765725_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|372675
NC_018012.1\|WP_014780561.1\|4758649_4760992_+\|DUF927-domain-containing-protein	unknown	unknown	gnl\|CDD\|336282
NC_018012.1\|WP_014780568.1\|4765721_4766048_+\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|367032
NC_018012.1\|WP_157174534.1\|4763860_4764289_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|377856
NC_018012.1\|WP_014780556.1\|4751857_4752415_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780566.1\|4764484_4765168_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
NC_018012.1\|WP_014780569.1\|4766044_4768354_+\|Mu-transposase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|378147

Protein	Function_ID	Function_description	E-value
NC_018012.1\|WP_083845831.1\|4756291_4756537_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	6.61079e-05
NC_018012.1\|WP_014777832.1\|4755133_4756099_+\|ExeA-family-protein	gnl\|CDD\|225806	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion].	2.03851e-44
NC_018012.1\|WP_014780570.1\|4768501_4769266_+\|AAA-family-ATPase	gnl\|CDD\|379165	pfam13401, AAA_22, AAA domain.	6.1244e-10
NC_018012.1\|WP_014780557.1\|4753490_4755128_+\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	0.000224923
NC_018012.1\|WP_014780568.1\|4765721_4766048_+\|DNA-binding-protein	gnl\|CDD\|367032	pfam02316, HTH_Tnp_Mu_1, Mu DNA-binding domain. This family consists of MuA-transposase and repressor protein CI. These proteins contain homologous DNA-binding domains at their N-termini which compete for the same DNA site within the Mu bacteriophage genome.	1.33443e-11
NC_018012.1\|WP_014780559.1\|4756816_4757242_+\|DNA-primase	gnl\|CDD\|273595	TIGR01391, DNA_primase, DNA primase, catalytic core. Members of this family are DNA primase, a ubiquitous bacteria protein. Most members of this family contain nearly two hundred additional residues C-terminal to the region represented here, but conservation between species is poor and the C-terminal region was not included in the seed alignment. This protein contains a CHC2 zinc finger (pfam01807) and a Toprim domain (pfam01751). [DNA metabolism, DNA replication, recombination, and repair].	6.17249e-07
NC_018012.1\|WP_014780572.1\|4769884_4770226_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|376540	pfam01381, HTH_3, Helix-turn-helix. This large family of DNA binding helix-turn helix proteins includes Cro and CI. Within Neisseria gonorrhoeae NGO_0477, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteristic of the whole family.	0.000865843
NC_018012.1\|WP_014780567.1\|4765389_4765725_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|372675	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding.	1.33333e-24
NC_018012.1\|WP_014780561.1\|4758649_4760992_+\|DUF927-domain-containing-protein	gnl\|CDD\|336282	pfam06048, DUF927, Domain of unknown function (DUF927). Family of bacterial proteins of unknown function. The C-terminal half of this family contains a P-loop motif. The N-terminal domain appears to have a unique fold, which contains three Helices and two strands. Structural analyses show that helicases containing this domain form a hexameric ring with a positively charged central pore threading a single DNA strand through suggestive of a replicative function for this helicase.	5.80305e-84
NC_018012.1\|WP_157174534.1\|4763860_4764289_+\|recombinase-family-protein	gnl\|CDD\|377856	pfam07508, Recombinase, Recombinase. This domain is usually found associated with pfam00239 in putative integrases/recombinases of mobile genetic elements of diverse bacteria and phages.	7.57991e-09
NC_018012.1\|WP_014776775.1\|4752862_4753465_+\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	6.79342e-58
NC_018012.1\|WP_014780566.1\|4764484_4765168_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	1.25161e-28
NC_018012.1\|WP_014780569.1\|4766044_4768354_+\|Mu-transposase-C-terminal-domain-containing-protein	gnl\|CDD\|378147	pfam09299, Mu-transpos_C, Mu transposase, C-terminal. Members of this family are found in various prokaryotic integrases and transposases. They adopt a beta-barrel structure with Greek-key topology.	2.02068e-19

>NC_018012.1|WP_014780564.1|4761834_4762425_+|hypothetical-protein
MNAIDRLRFSSPGASESLTEYAGMLQRMAYSIQGAGALVCNRDHAATHEAGHTVVHFAHGDRIRSVRVFERGGAWLGMTRAGKRWRMDPESEPASDLKQARIYLAGPLAEWFYTKSPAFGAGVDEIALARVIVEQAAPKLGVDDECLMMQTMMQTMMQTFETMERHRPALDEIARRLMRRPKLEGKSVEAIMRGYR
>NC_018012.1|WP_014780563.1|4761683_4761848_+|hypothetical-protein
MTTPELDSASIKPRIRAESATKSPAPSGARAVCFLARETVYSSAYRNEKLYERD
>NC_018012.1|WP_157174533.1|4760988_4761687_+|hypothetical-protein
MMDLTALSRVFERHPAETEQPPAKSPEQPQDSAATAAPCHPTGSLPDWQEASEERAAILKHEAGASLEAATATAADWHPSPNETRDGWHGYTVANLQAAAGPDWSEIASDPAALDALAFLLLVRAQRLRGDCPTHYTAPALCEHCGPVWIWEGGPARMLACPWCEVTARKIDIPRPAFPCGRCREFEPSASSPAAGVGRCRIKARASERGGALWPGVERVCREWRPSEEDPS
>NC_018012.1|WP_014780561.1|4758649_4760992_+|DUF927-domain-containing-protein
MAFQNRFDPPNNGRKVFSPQVWTKAGGWQWKALPEPRPLYGLDRLASQPEAPALICEGEKAADAAARLLPDLSPLATMNGAQSPAKSDLSPLNARCVRIWPDHDDPGAAFARKVAELARQAGAASVEVLDLASLTRDPKTGEPRELPKGWDAFDAAADGWTPETLTAAVRWIPFAPPEAPKQPAPKGSEGAALPFGFELRANGIYCQRPGNAKDKTTEDKGGNGAGGGGDGKQWVYVCPPLKVLAVTRDERGEGFGRLVEFEDLDGRTRREVIGDRERSGSGDTLRARLADMGFELSTHPEARRQFLELLRRWVPEKRARSVTQTGWTPEGGAFVLPDRVLGEGPEPVILAAEGERPAFGTRGTLDDWRGSVGAFCRGNSRLTFCVSMAFAAPLLRLCGAESGGFHLRGSSTDASSSGKTTVQRAACSVCGSPSFLESCRTTDNAAETQAELHNDAFLPLDELAQMEARAAGEWIYMLSNGRGKARMGRDAGARPVKSWRLLFLTSGEIGLADHMATANKHARAGQETRLAEIPADAGEGFGIFENLHGFKNGALFAAALTDAAALSYGTPLIAFVEALIRHRAELPATIKKLQHQFVTEALTGIENPAGQVRRVAARFGLVAVGGELATSEGITGWEPGEAIQAAARCFKDWMAARGGSVPAEERDLLAQVRYFFEAHANRFRWKDRVLDDHAPEVPHQAGFKDTPNGKENGIVYLAFPETFKREICEGYDAKDAARVLVRHGILKPSGDKRPSRNERLPGYKNPQRVFVFAFDGEGGE
>NC_018012.1|WP_014780559.1|4756816_4757242_+|DNA-primase
MTTNTDQGPTRSRRQFDALKKAINPEAFYRREIQNVPAQLKINNEGWTQNLRCPFPSHDDTTPSFGFNVKTGACRCNGCGESCGSVIDAAMSLHRLDKIEAYDYLKSSYSVELGAAPVRFPRFFVFQGSVLMLPVFLSAER
>NC_018012.1|WP_083845831.1|4756291_4756537_+|helix-turn-helix-domain-containing-protein
MRVSKENSRLVAIQRRRRLDEKEAASSLGLSVRTLQQWRLKGGGPPFLKLGAAVRYDEEVLECWATSRTRANTSDPGPAAA
>NC_018012.1|WP_014777832.1|4755133_4756099_+|ExeA-family-protein
MQSEVMKHFGLTRGLPRAGYFETAQQRRVFDDIKIAIHGGQLLALVGLVGCGKTTTLHRLTEALKDEREILVSQSLAVDKHRINLGTLMLALFYDLLTEKDFKVPTQPEKRERKLIEVIAKRKKPVALFVDEAHDLHPKTLVGLKRLIELVQNNGGTLSVVLVGHPKLRNDLRRPALEEIGARTTLFWLDGIKGQELAYLDWLLEQCAPATAADLLTAEARERLAAALSTPLQIEQYLTLALEAAYQVGQKPVTLEVIEAVLAADIDALEATLTRYGYNTRALADLLNVRPAEIRSFLHGQLAPGRTQELHGQLLAAGLPV
>NC_018012.1|WP_014780557.1|4753490_4755128_+|integrase
MTRHQLPPEALLDLCRRRAALAPRSPERRALIQQTAALYGVSEDALYRALRARARPKALNRADRGVPRVLPPAELEHDCEVIAALKIRTSNKKGRHLSTVQAIRLLEEHGVETPAGLLRAPAAVLTRSTVNHYLKQWGFDDRTLTRVPPAVRFEARHSNDCWQFDLSPSDLKQVARPAWFEEGRGHPLLMLYSVVDDRSGVAYQEYHGVYGEDVEAALRFLFNAMAPKSDPELPFQGRPAMLYMDSGPIGKSLIFHRVMDYLGIEVRTHMPKDSDGRRPTARAKGKVERPFRSVKEMHETLYHLHAPETEAEANAWLLRFLIHYNRMPHRREPHARIDDWLANLPPDGVRAMCSWERFGTFAREPERRKVGVDARASLEGTLYQVDPDLAGEDVILWWGLFDNALYVEHGERRFGPYDPVGGPIPLHRYRSFKKTKTQQRAERIAALAEQLALPGSVWGGPAASVGLAPGPVVAQTPFVDPDPFQDLAFPTAVAAKRAIAEYLGTPLAKLPAEALAALDVALAESLRKVDVIDDARTHLKPLRGG
>NC_018012.1|WP_014776775.1|4752862_4753465_+|recombinase-family-protein
MDIGYARVSTKDQSLDLQVDALRRAGCAKVYQEVVSGAKVPRPVLDTLLGELRPGDVLVIWKLDRLGRSLRHLVELAGVLLEQQVGLKSLNDPLDTTTSQGRLVFNLFAALAEFEKDLIRERTQAGLVAARARGRLGGRPKGLPPEAEKTACAAETLYRERRLSVREIAAQLGIAKSTLYDYLRHRGVPIGTPGPAAQGR
>NC_018012.1|WP_014780556.1|4751857_4752415_+|hypothetical-protein
MNFPDWAPPSVIERWQECMQENEEELARSIAFYRDLQEKGELSKDYDAETIAREDRKDALDFPGMIGRLLTDEKMEWAWKRLPKLKERNQRHHSALIEAIFIRVVERGFYGSVTRIERMPTAEFLKWIADVQATAAKLAGLVEDTGLDYYLWRDFKKAQVQAAVRCSGLQTSAARPANIAIFDPN
>NC_018012.1|WP_157174534.1|4763860_4764289_+|recombinase-family-protein
MTEQIALRFPDGTKDRIRSFARSGETMTAAVLRALECLAMTGDSPIMTAPDLDLRREVSDLAERVAILESLAGRTKNPERAQTVERIQRMRATGISCQTIADALNREGVPTLSGRGQWQPGTVQKLAQGATDSHGSPEQESD
>NC_018012.1|WP_014780566.1|4764484_4765168_-|helix-turn-helix-transcriptional-regulator
MNPETLEALAGRIRKCAELAGSGDELARKTGIPRRSLETYLSGNAEPKTFRLAAIAKAAGVWVDWLATGEGPMLARERRPEPTAPAGIWEEFALVPLYDVSVSAGPGVFVESEAVLAQLAFRRDWLRQTGIQADNLAVVRAVGDSMEPTIRHGDALLVDRAKREPEGGYIYVLQIDHELRAKRLQRLADGRVRLGTDNVAYAEEFIERDRLHQLEIVGRVVWKGGMM
>NC_018012.1|WP_014780567.1|4765389_4765725_+|helix-turn-helix-domain-containing-protein
MKQLLDPKNPAAHWELIKAALRARGSSLSAIARDLGLMRQAVHHVHHKRYPAVEAAIAKVLDVQPSALWPDRYHADGRPIRQRPTAPMAKPQLRRKGNVIASVSDDKRESL
>NC_018012.1|WP_014780568.1|4765721_4766048_+|DNA-binding-protein
MKSWYSASELIGQPGLPGTVQNVNAKAAREGWIKRPRAGRGGGKEYAVASLPTVTQRHLAGDPSDSLPTDQEEAPVSLCRLLLGGMLVWIGLRFLSAAQALLNEERTS
>NC_018012.1|WP_014780569.1|4766044_4768354_+|Mu-transposase-C-terminal-domain-containing-protein
MKSWYSVAELAGLPGLPQTERAIQLRAKRENWKHQPRPGRGGGKEYALKSLPKITQDHLLQVAIAQVPALAAPVVAPLSGDVTQLVPVSAPDHLPAAGSLVAANPTAISADPLADRHLATNPNAPRDVTELKDWQRRRMEARLALLQEIDRLGTVLGLEKSIKTLVNQADLGQLPPELAAMLGVANAKSGGADGERTLSRRTLYRWLADRAQGYLALAPKSTERQRVPAWAPALLQLYQRPTKPSLAWALGELPQHLPEGTAAPSYWAASRFLKKLGSVERERGRLGTRDLRNLQPFRRRSTREMWPGDVYTMDGHTFDAEIRHPVHGRPFRPEITSCLDVCTRRSVGWSIALAESGWAVLDALRHACLVGGIPAIFYVDNGSGYCNALMDDAAVGLLARLSITKATSIPYNSQARGIIERSHQSLWIRAAKTLPTYLGDAMDKQARDKVYRLTRKDIREQGASPLLMPWREFLGWAEANARAYNARPHRGLPKIHDAQTGKVRHQSPDEAWAAAIAEGWEPATVLPDEANDLFRPYQVRKTTRGEVSLFGNTYFSTLLAEHTGDLVQVGYDIHDADRVWVRDRNHRLICVADFEANKSSYFPVTAIDEAAARRAKGRLSRLDRQIDEIEAEHAGLTGARLPQPAPATAEEEAATAEMLERARQWQADDEALAQAEELAQQEATQQALARLETPSPQPLSQGERGLSDSPASIARPDFQTDYDLWLWMDAHPEAATEQDRLYLEQALADSPALQIQIEAEQDQRARRRR
>NC_018012.1|WP_014780570.1|4768501_4769266_+|AAA-family-ATPase
MKKVFAITSNAKRFLGGMTALEKRGAREACWLSLNGPAGLGKSLLVQWYAGKNDGVYLRAKTTWTSRSALAELVTELGSSPARRQDELFAQALGTLGRDPRLVIIDEVEHCLHDIKVLETFRDLSDLCECPIVIVGMEAVKTKIQRYEQISSRITQVVDFLPASLEDVRIMAETLTELRYADDLIAKIQSESEGRYRLIMDALAEVERTAKRNGWAEVNASQFPARLTHDWRLRTRRGGVKGEPGSKALAEGAA
>NC_018012.1|WP_014780571.1|4769265_4769892_+|hypothetical-protein
MRSSTLLLKLIGEAGEEGATLEALDQAIDGLSRKAIVMATGVLAQRGLLERRAPGHYRLTAAGRLALEAGIAIKPGPRGTHATAIQARSLRAKLWRAMRALNKFGIDDLLLRGANGDEADARNNAGKYVNVLERAGYLIRLKHRLPGDAPTSPGFVRWLLVHNTGPKAPIWQAGKRQLHDPNTGKTFALDANAGTDAQPQPTLEAAHG
>NC_018012.1|WP_014780572.1|4769884_4770226_+|helix-turn-helix-transcriptional-regulator
MDNVTDDALALLHAEVARTDTVRTAERLGVSRTAVSLLINGKYTADPTRMYALIGDVLGGLHCPHLDADLSRDACRRWHGRATPPAQSAAAVAHWRACQQCPHNPLADREAQP
>NC_018012.1|WP_014780573.1|4770222_4770492_+|hypothetical-protein
MSDANTHADLLALGLIVRECPWPLADVCPAPRYPFWQVDDDVTGVPVAFGSDRDAATANALRRLAHLAARRKLTVLQLLDQLRSDRHHA
>NC_018012.1|WP_014780574.1|4770484_4770751_+|hypothetical-protein
MPSRQPTAQQFDLIRTLAVAGELARRGCRVLDAQVLPHPRVRISAPPPGLLPTFGFLPPPPGVCRVPVLCVAHRWRTRIEWFATEGNQ

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Crispr_ID: NC_018012_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018012_14

4773487-4773574

Orphan

Consensus_repeat	Method
CCCCGCTCGCCCCGGAGGACGCCCCATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018012_14

>merge|NC_018012|14|4773487-4773574|CRISPRCasFinder
CCCCGCTCGCCCCGGAGGACGCCCCATGGCCCGCAGGTCTTCGGCGGCCTGTTCGGGTTCCCCCGCTCGCCCCGGAGGACGCGCCATG

>NC_018012|14|14|4773487-4773574|CRISPRCasFinder
CCCCGCTCGCCCCGGAGGACGCCCCATG	GCCCGCAGGTCTTCGGCGGCCTGTTCGGGTTC
CCCCGCTCGCCCCGGAGGACGCGCCATG

Protein	Signature genes	Signature genes Name	Protein_function
NC_018012.1\|WP_014780584.1\|4774845_4775181_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_169315585.1\|4770705_4771296_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780587.1\|4776136_4776610_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780570.1\|4768501_4769266_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379165
NC_018012.1\|WP_014780579.1\|4772476_4773142_+\|DUF3164-family-protein	unknown	unknown	gnl\|CDD\|371491
NC_018012.1\|WP_014780583.1\|4774376_4774832_+\|Mor-transcription-activator-like-protein	unknown	unknown	gnl\|CDD\|337191
NC_018012.1\|WP_014780589.1\|4777465_4778116_+\|Rha-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378235
NC_018012.1\|WP_014780591.1\|4778390_4778642_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780577.1\|4771903_4772059_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780576.1\|4771292_4771907_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780571.1\|4769265_4769892_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780588.1\|4776624_4777152_+\|DUF4124-domain-containing-protein	unknown	unknown	gnl\|CDD\|379230
NC_018012.1\|WP_014780585.1\|4775254_4775515_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780572.1\|4769884_4770226_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376540
NC_018012.1\|WP_014780586.1\|4775530_4775755_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780590.1\|4778112_4778400_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780573.1\|4770222_4770492_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780578.1\|4772051_4772420_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780574.1\|4770484_4770751_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780582.1\|4773957_4774380_+\|regulatory-protein-GemA	unknown	unknown	gnl\|CDD\|377635

Protein	Function_ID	Function_description	E-value
NC_018012.1\|WP_014780588.1\|4776624_4777152_+\|DUF4124-domain-containing-protein	gnl\|CDD\|379230	pfam13511, DUF4124, Domain of unknown function (DUF4124). This presumed domain is found in a variety of bacterial proteins. It is found associated at the N-terminus associated with other domains such as the SLT domain and glutaredoxin domains in some proteins. The function of this domain is unknown, but it may have an Ig-like fold.	0.00201551
NC_018012.1\|WP_014780589.1\|4777465_4778116_+\|Rha-family-transcriptional-regulator	gnl\|CDD\|378235	pfam09669, Phage_pRha, Phage regulatory protein Rha (Phage_pRha). Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that Rha is a phage regulatory protein.	4.32122e-36
NC_018012.1\|WP_014780572.1\|4769884_4770226_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|376540	pfam01381, HTH_3, Helix-turn-helix. This large family of DNA binding helix-turn helix proteins includes Cro and CI. Within Neisseria gonorrhoeae NGO_0477, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteristic of the whole family.	0.000865843
NC_018012.1\|WP_014780570.1\|4768501_4769266_+\|AAA-family-ATPase	gnl\|CDD\|379165	pfam13401, AAA_22, AAA domain.	6.1244e-10
NC_018012.1\|WP_014780579.1\|4772476_4773142_+\|DUF3164-family-protein	gnl\|CDD\|371491	pfam11363, DUF3164, Protein of unknown function (DUF3164). This family of proteins has no known function.	2.12464e-58
NC_018012.1\|WP_014780583.1\|4774376_4774832_+\|Mor-transcription-activator-like-protein	gnl\|CDD\|337191	pfam08765, Mor, Mor transcription activator family. Mor (Middle operon regulator) is a sequence specific DNA binding protein. It mediates transcription activation through its interactions with the C-terminal domains of the alpha and sigma subunits of bacterial RNA polymerase. The N terminal region of Mor is the dimerization region, and the C terminal contains a helix-turn-helix motif which binds DNA.	1.64699e-10
NC_018012.1\|WP_014780582.1\|4773957_4774380_+\|regulatory-protein-GemA	gnl\|CDD\|377635	pfam06252, DUF1018, Protein of unknown function (DUF1018). This family consists of several bacterial and phage proteins of unknown function.	9.68578e-42

>NC_018012.1|WP_014780579.1|4772476_4773142_+|DUF3164-family-protein
MTELPTAPPPGYLEDAQGRLVPEKMVRPHELQRDALVRDLVGRIAGARDQMALLKRDLLADIAAHIQLVAEAYDVRITGTNGNVSLASYDGRLKVERDIAERVQIGEQIQAAEALIREILDEIADPTAKAIVDRAFRRNRKTGELSPARLIDLISVQLDDERWERAVAAIRDAIQTVGTVTYFRAYRRDQPDQPWQMIPLDFSAIAPAPPSSDAPAHDLAA
>NC_018012.1|WP_014780578.1|4772051_4772420_+|hypothetical-protein
MIDDAQVDLYAHAKPFGAASFDSASFDSASFDSAQDKPFGAAYRHPGDARTPNLLGLRDAYLSAVECRRAHVLSLCDRLNALANDAGPSLQEALEAEQDCLDDLLEATLARFEYLTNRPGGA
>NC_018012.1|WP_014780577.1|4771903_4772059_+|hypothetical-protein
MTDILLALLIGAQLGAIAAVSALALCRVASAGDGRRHDDPRPTIQETRPHD
>NC_018012.1|WP_014780576.1|4771292_4771907_+|hypothetical-protein
MSLSGTCPECGCRADLAVFASAGEVNRALAAALEIPAPLGGRVLRYLRLFSPPRKALATGKAVRLLTELSQAIGRAEIDRKGSVWSAPLPVWEAALDAILATPPERLPLNGHGYLFETVANLAAKHAGRAEAARLAHARGDTPIGRQAPSAHGARDPDPIQEIVNDLRALKTLEAYNPGQHTAEIAGLQQRLAAVRVNPNPETP
>NC_018012.1|WP_169315585.1|4770705_4771296_+|hypothetical-protein
MAHPHRVVRHGGQPMSKRGFERKTRAAPGERRPVAGQPYRQTPEQQARDWEPRDPVGYTPRALDLKVLAASPTDRHPTRPAVNLDPLDARRARVRGQRQGRATQAATAAVAPRPRQPARAPRTPNVTKRLLAVLQSDPARAWSVFELRAQVAFSPSSTVSSLLRRYVRDGRVASIPSERGPHGFGGKRYRWTGEGA
>NC_018012.1|WP_014780574.1|4770484_4770751_+|hypothetical-protein
MPSRQPTAQQFDLIRTLAVAGELARRGCRVLDAQVLPHPRVRISAPPPGLLPTFGFLPPPPGVCRVPVLCVAHRWRTRIEWFATEGNQ
>NC_018012.1|WP_014780573.1|4770222_4770492_+|hypothetical-protein
MSDANTHADLLALGLIVRECPWPLADVCPAPRYPFWQVDDDVTGVPVAFGSDRDAATANALRRLAHLAARRKLTVLQLLDQLRSDRHHA
>NC_018012.1|WP_014780572.1|4769884_4770226_+|helix-turn-helix-transcriptional-regulator
MDNVTDDALALLHAEVARTDTVRTAERLGVSRTAVSLLINGKYTADPTRMYALIGDVLGGLHCPHLDADLSRDACRRWHGRATPPAQSAAAVAHWRACQQCPHNPLADREAQP
>NC_018012.1|WP_014780571.1|4769265_4769892_+|hypothetical-protein
MRSSTLLLKLIGEAGEEGATLEALDQAIDGLSRKAIVMATGVLAQRGLLERRAPGHYRLTAAGRLALEAGIAIKPGPRGTHATAIQARSLRAKLWRAMRALNKFGIDDLLLRGANGDEADARNNAGKYVNVLERAGYLIRLKHRLPGDAPTSPGFVRWLLVHNTGPKAPIWQAGKRQLHDPNTGKTFALDANAGTDAQPQPTLEAAHG
>NC_018012.1|WP_014780570.1|4768501_4769266_+|AAA-family-ATPase
MKKVFAITSNAKRFLGGMTALEKRGAREACWLSLNGPAGLGKSLLVQWYAGKNDGVYLRAKTTWTSRSALAELVTELGSSPARRQDELFAQALGTLGRDPRLVIIDEVEHCLHDIKVLETFRDLSDLCECPIVIVGMEAVKTKIQRYEQISSRITQVVDFLPASLEDVRIMAETLTELRYADDLIAKIQSESEGRYRLIMDALAEVERTAKRNGWAEVNASQFPARLTHDWRLRTRRGGVKGEPGSKALAEGAA
>NC_018012.1|WP_014780582.1|4773957_4774380_+|regulatory-protein-GemA
MHNDLAKIHIAKQALGLDDATYRAMLQRIGGVDSSAQLDPVGRRALLAEFRAAGWKPTPGKAANARALASDPQSRMIRALWLRLHQAGKVRDPSEKSLAQYVKRQTRIDRLDWLSAAQARRVIEALKGWAARVGVTLEDA
>NC_018012.1|WP_014780583.1|4774376_4774832_+|Mor-transcription-activator-like-protein
MTTPADLSAAAQRPHALRVDLADLPRDLREIADLIGLPGALDLVDTWGGVRLYLPLAHHLPDHHALVARLGRDAAERLCERFGGADLAIPRALAALRAARDRLICHEHAHGSPARALALRYRLSERRVWEILAGADARDAAAFAARQMPLF
>NC_018012.1|WP_014780584.1|4774845_4775181_+|hypothetical-protein
MDIDEPRAIIRDACRGLSRAELIEVVDCLEADCRFVSHISLRQVVHKVRRNTLVRRYQIALNDYDLLDFRFPEDPVEPAAVLAYLESVRAKDAKWKHVERLRDKIMATFKT
>NC_018012.1|WP_014780585.1|4775254_4775515_-|hypothetical-protein
MAIYRKERLEPYLQELEAYYWALRRAVEGVAPNENLAEHYLVNPEQFRREFREVDIDLVLRQIEHFKATAANLKQLRSRAHKLSRQ
>NC_018012.1|WP_014780586.1|4775530_4775755_+|hypothetical-protein
MIMTTQTNQDQCAGARIAALLPIMDERYARLKGTLSQAAAGADIPDWRLDLERADLATVLEVMTPPPADDDDEE
>NC_018012.1|WP_014780587.1|4776136_4776610_+|hypothetical-protein
MTQGWKNCPTCGYQWLPADDVQDLQCPTCRAAGVKIRAGSDARAPSNSPFARFKLWYLLVAIVLIAGFYFGWEKWTAIKKQQDLDDAAQNLSQAIEAAQAVIDKEIETLDEEIRAGRERLKAAMQAEAEDRRMLRELERDNFERKIREIDRNSQMRQ
>NC_018012.1|WP_014780588.1|4776624_4777152_+|DUF4124-domain-containing-protein
MKRSIVALVGMIVVGTTQGAGVYRCTSAAGEVIYSDAVCMDRPDRAAVAIDPPSSDLRGYPISDMRNIVVGIDANQPGAALMVSEGTWMVHGDNWQVASQYSKVHCIKLHPGDYSLQAACMRNAARGFDELRGNYDMPPQIAQQAKIHCIRMHPEDFSIQAACMRNQSRGYRDMR
>NC_018012.1|WP_014780589.1|4777465_4778116_+|Rha-family-transcriptional-regulator
MSDLILLPASAITLKDGQPVTTSLIVAETFGKQHFHVLRDIDALDCSPEFAKSNFGCADFIDKNGDPRRMFEITRNGFMFLTMGYRGPKPARIKEAYIARFDAMDAQLRQIPTGVGEKTIGLSRYAELLEAENALLRQRLPAPLVSVAPSAPVKPGPRLVTPEEAAEIVDRFTAGESRYAIGKALGRNSKTINRILARANADHAPQMALRLLEGKS
>NC_018012.1|WP_014780590.1|4778112_4778400_+|hypothetical-protein
MTNHSLQLAHAAADNAVARARHEVAQLRDRLTAAQRRLRAAERTRDAARLNWLAVRDAYPTWAVADPVGTIDAAPSGAVQLTPRTNTAWEGASCN
>NC_018012.1|WP_014780591.1|4778390_4778642_+|hypothetical-protein
MQLMIDLGQSPRLIDDLGIIADCYAAVDDLLTGVHIQERERERIATLLNVLGTLQRGAIDHLRQTGTERLAAVEEGLRVCVCA

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Crispr_ID: NC_018012_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018012_15

4879408-4879738

TypeIII

I-B

Consensus_repeat	Method
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CRISPRCasFinder
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCC	CRT
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCC	PILER-CR

4 spacers

csx16,cas4,cas2,cas1,cas6,cmr3gr5

The CRISPR arrays of NC_018012_15

>merge|NC_018012|15|4879408-4879738|CRISPRCasFinder,CRT,PILER-CR
ATTTTAATCCTTGTTGTATTGGACTGGGTGCTGCAACGGCGTACCACGAGGCGATGCGTTTGGGGCGCGAGCAGTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCCTGCGGTGACCTTGGCGATGTTGCCGGTCAGTGCGCGTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCCCGTCCTTCGTTCGGAGAGCACGGAAATCTTCGTGTTGTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCCGAAGCGCCTTATGGATACTCCTGCCTTGGCTTCGAGTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCC

>NC_018012|15|15|4879408-4879738|CRISPRCasFinder
ATTTTAATCCTTGTTGTATTGGACTGGGTGCTGCAAC	GGCGTACCACGAGGCGATGCGTTTGGGGCGCGAGCA
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CTGCGGTGACCTTGGCGATGTTGCCGGTCAGTGCGC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CCGTCCTTCGTTCGGAGAGCACGGAAATCTTCGTGTT
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CGAAGCGCCTTATGGATACTCCTGCCTTGGCTTCGA
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCC

>NC_018012|15|3|4879408-4879738|CRT
ATTTTAATCCTTGTTGTATTGGACTGGGTGCTGCAACG	GCGTACCACGAGGCGATGCGTTTGGGGCGCGAGCA
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCC	TGCGGTGACCTTGGCGATGTTGCCGGTCAGTGCGC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCC	CGTCCTTCGTTCGGAGAGCACGGAAATCTTCGTGTT
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCC	GAAGCGCCTTATGGATACTCCTGCCTTGGCTTCGA
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCC

>NC_018012|15|3|4879481-4879738|PILER-CR
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCC	TGCGGTGACCTTGGCGATGTTGCCGGTCAGTGCGC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCC	CGTCCTTCGTTCGGAGAGCACGGAAATCTTCGTGTT
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCC	GAAGCGCCTTATGGATACTCCTGCCTTGGCTTCGA
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_018012.1\|WP_157174542.1\|4878393_4878933_-\|SHOCT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378276
NC_018012.1\|WP_157174540.1\|4869910_4870330_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780673.1\|4871298_4872753_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238119
NC_018012.1\|WP_014780683.1\|4885700_4886270_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NC_018012.1\|WP_014776993.1\|4879750_4880935_-\|ISAs1-family-transposase	unknown	unknown	gnl\|CDD\|379382
NC_018012.1\|WP_014780685.1\|4887024_4887378_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780677.1\|4878019_4878367_+\|nitrous-oxide-stimulated-promoter-family-protein	unknown	unknown	gnl\|CDD\|371708
NC_018012.1\|WP_041447215.1\|4887499_4888609_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NC_018012.1\|WP_157174541.1\|4870353_4871178_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780670.1\|4868669_4869911_+\|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|234824
NC_018012.1\|WP_014780681.1\|4884015_4884321_-\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NC_018012.1\|WP_014780682.1\|4884342_4885371_-\|CRISPR-associated-endonuclease-Cas1	cas1	pfam01867_cas1_CAS-I:CAS-II:CAS-III	gnl\|CDD\|376633
NC_018012.1\|WP_014780684.1\|4886296_4887037_-\|hypothetical-protein	cas6	cls000004_cas6_CAS-I:CAS-III	gnl\|CDD\|379957
NC_018012.1\|WP_014780675.1\|4873666_4875646_+\|HDOD-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NC_018012.1\|WP_014780676.1\|4875799_4877497_+\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NC_018012.1\|WP_014780686.1\|4888521_4889118_-\|CRISPR-associated-protein-Cmr3	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NC_018012.1\|WP_157174685.1\|4872814_4873576_+\|endonuclease	unknown	unknown	gnl\|CDD\|225140
NC_018012.1\|WP_014776993.1\|4882233_4883418_-\|ISAs1-family-transposase	unknown	unknown	gnl\|CDD\|379382
NC_018012.1\|WP_014780680.1\|4883452_4884019_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NC_018012.1\|WP_083845802.1\|4879031_4879340_-\|CRISPR-associated-protein-Csx16	csx16	cd09695_csx16_CAS-I:CAS-III	gnl\|CDD\|370601

Protein	Function_ID	Function_description	E-value
NC_018012.1\|WP_157174542.1\|4878393_4878933_-\|SHOCT-domain-containing-protein	gnl\|CDD\|378276	pfam09851, SHOCT, Short C-terminal domain.	8.82497e-05
NC_018012.1\|WP_014776993.1\|4879750_4880935_-\|ISAs1-family-transposase	gnl\|CDD\|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	3.97845e-35
NC_018012.1\|WP_014780673.1\|4871298_4872753_-\|VWA-domain-containing-protein	gnl\|CDD\|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	1.83207e-14
NC_018012.1\|WP_014780683.1\|4885700_4886270_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	3.55311e-41
NC_018012.1\|WP_014780680.1\|4883452_4884019_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	3.126e-24
NC_018012.1\|WP_041447215.1\|4887499_4888609_+\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	1.15786e-27
NC_018012.1\|WP_014780677.1\|4878019_4878367_+\|nitrous-oxide-stimulated-promoter-family-protein	gnl\|CDD\|371708	pfam11756, YgbA_NO, Nitrous oxide-stimulated promoter. The function of ygaB is not known but it is a promoter that is stimulated by the presence of nitrous oxide. It is regulated by the gene-product of the bacterial nsrR gene.	5.31203e-54
NC_018012.1\|WP_014780670.1\|4868669_4869911_+\|glucose-1-phosphate-adenylyltransferase	gnl\|CDD\|234824	PRK00725, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	1.4879e-143
NC_018012.1\|WP_014780681.1\|4884015_4884321_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.8442e-21
NC_018012.1\|WP_014780682.1\|4884342_4885371_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.66713e-92
NC_018012.1\|WP_014780684.1\|4886296_4887037_-\|hypothetical-protein	gnl\|CDD\|379957	pfam17262, DUF5328, Family of unknown function (DUF5328). This family of unknown function can be found in Bacteria and Archaea. Some of the proteins in this family are annotated in UniProt as putative DNA repair proteins.	1.05442e-44
NC_018012.1\|WP_014780675.1\|4873666_4875646_+\|HDOD-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	6.44285e-56
NC_018012.1\|WP_014780676.1\|4875799_4877497_+\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	2.24266e-53
NC_018012.1\|WP_014780686.1\|4888521_4889118_-\|CRISPR-associated-protein-Cmr3	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.24045e-28
NC_018012.1\|WP_157174685.1\|4872814_4873576_+\|endonuclease	gnl\|CDD\|225140	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair].	3.13948e-87
NC_018012.1\|WP_014776993.1\|4882233_4883418_-\|ISAs1-family-transposase	gnl\|CDD\|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	3.97845e-35
NC_018012.1\|WP_083845802.1\|4879031_4879340_-\|CRISPR-associated-protein-Csx16	gnl\|CDD\|370601	pfam09652, Cas_VVA1548, Putative CRISPR-associated protein (Cas_VVA1548). This entry represents a conserved region of about 95 amino acids found exclusively in species with CRISPRs (Clustered Regularly Interspaced Short Palindromic Repeats). In all bacterial species that contain this entry, the genes encoding the proteins are in the midst of a cluster of cas (CRISPR-associated) genes.	1.02306e-21

>NC_018012.1|WP_083845802.1|4879031_4879340_-|CRISPR-associated-protein-Csx16
MKPAPTSGYDIRCLDPTIIQPGDTLIGSLPVNLSAEIRERGGRYPHLSLDLPAPLRGQELSAAQTRDHGHGSRNFASGGATSSRLTATQACGSGQTRCGGVS
>NC_018012.1|WP_157174542.1|4878393_4878933_-|SHOCT-domain-containing-protein
MRDGDPRHQRHPGHQKARLTSSPPQTGATVTRGTNDTLVIETDPPGADVKLSNGMVGKTPATFKLPRKDSLVVDLHKVGYEAVKVNVRPQISGAGGAGMAGNVLLGGIIGVAVDAGTGAMNDLKPNPIHVRLSRLDDDLGEASVDGVEQRMATLKTMRQSGLLTEAEYRRKRTALLSRL
>NC_018012.1|WP_014780677.1|4878019_4878367_+|nitrous-oxide-stimulated-promoter-family-protein
MSAGRRIIREKKTIAAMMAIYCRDHHATAGGLCADCAGLLDYAQRRLDTCLFQEEKPACNLCEVHCYAPLQRERVRVIMRDAGPRMPWPHPILSLGHLLDKWRPAPKLKDRKRER
>NC_018012.1|WP_014780676.1|4875799_4877497_+|GMC-family-oxidoreductase
MTTDCDVCIIGSGAGGAPVAYTLATAGQSVIVLEKGPWLRDEHFYKDELACCRRSVYTPELRHEQHVIEEPDGEGGWTATPTSESGWDFWNGNLVGGSSNLMSGFFHRLKPVDFRQLSELGPIAGANRVDWPIGYADLEPYYDLVERLIGVSGTITPHPGQEPRSSPDFPYPPTAEHPVSAWIDDACATLGVHSLRVPRAILSRPDLGRRACEYSGYCGSFGCASGAKGGARAALLDPAFATGRCQIRPKAKVHRLLSDPRGRVTAAEYVDADGRLQRVTAKRFVVACQAVETSRLLLNSPGPRFPNGLANNQGQVGRNLLFSAGGSGSGDLEYARLTPERAAQLKVMGPFVNRALDDWYLIEDPDFAPGRHKGGIVEFLLAHPNPTGKANRAKWRDGELLWGAPLKRRLEQWFRTDRTLRFEVFGDWLPTDDCRVTLDPQFKDRWGQPVARIRIGHHPHDLEVGRYLATRGERVLRELGAVRVSSSVSGAPPANLMAGGCRFGTDPATSVLDPDCRAHEVENLYVTDGSFMPTGGSVPYTWTIYANALRVADRMLGRRLETARA
>NC_018012.1|WP_014780675.1|4873666_4875646_+|HDOD-domain-containing-protein
MDDPDRNAQAVRAALRGEVSELLPAPAAAVKLLQLTRDEDAGVGAISHVIETEPALAAKVLRIVNSAFYGFPRHIRSIHRAVTLLGLSAVRQAALHLLFYEGLIQRGDKGVFDRLYFWQHSLLVAILSRDMAERLEHPDPDSLYAAGLLHDLGKMILESHGRVRYSDFLAASSNSGNPVREDEQTYFGVSHDTVGAVIGERWQLPELICRVQRLHHSSFSDAGLTPLQAQEVAIVVLADFIAWTQGIGSTNTRGSPALSPDVVTLVPLERIDLPDILERADKEISEIGAFYGLQFPSSQQLRANLVSTVIGLSRADSGHRAPMPAGSRASYTAPHHSLDPDEFIPRTLEALQREFGIRRLLMMQIEPKRRSLVATHALPAPMSSNPRPPLELAILTLSGDLVRCLREHRPTLIRESPENAEILASLEASEAAVVPVMNHGRLLGVLCLSNGRDEAPVGIGPLAEVMRVASELGIALERSRIFAQERAKAEIDPLTRLHNRSAMERFLNQSFRQAAESGRRFAVGLLDIDRFKVFNDSFGHQAGDDVLRIVADTMRSLTRPGDFLGRYGGEEFLFVLLDASEQTALVYAERIRKEIERRGQMLQERFPGHALTASVGVAINDSRYPGPREIVAAADAALYRAKETGRNRVVPAWRLSNAS
>NC_018012.1|WP_157174685.1|4872814_4873576_+|endonuclease
MATLQSARRVDRESLTDRSAPLRRQVNHLEFDEGRLRWVHAALFAAYGHQHWWPAESPFEVMIGAVLTQNTAWSNVERALARLSASSALEPAAILALDPAELAEALRPAGYFNLKARRLSAFCVEYLAAGGLEGWGALDTETLRRALLKVNGIGPETADDMLLYAFERPVFVVDAYTRRIFARLGAIAGDEAYEQIRAGFEQTLGPDVPLFKEYHALIVQHAKQACRARPICPDCPLREACPAALAPSLHAKM
>NC_018012.1|WP_014780673.1|4871298_4872753_-|VWA-domain-containing-protein
MTCKPVAVRLNLLALLAILTCMPAEAVDVVLTLDRSLSMKANDPNRDSTKGAELFGELLGAEDRLALTTFAQESERLLALTPLSGTGTRERVSSLIKQVRMDGIRTNFEAALRTAYRLYPDQPPDPANERVLVLFSDGQLNLGNEDANQTSRAAVIKEIIPKFQAAGIRILGVAFSPEADLAFLRRLADATGGQAFRADKPADIYDAFVRLFEQTDQPLTAPVIDGEVKVDANVRELKLLVKRDTGDGPMQLTDPSGRTFGVDEQTPGVDWKSTPYFDRISIQQPEAGSWKVTSDNADKKAYIESDLDLHATLPVLASLDETVTVVAKLLYRGVAVDPSLMKNTRFTATSLDASGVIQQQLELQPGASDPTARNYRGTFAFSTPGLFQVRVSAEGVDFQRQKTYFLTILGTEQPESANAQAGAGSPDNATDADSPDSDPSNQRAAFFMLLLGNLGLLALAGVGVGVWWWRRRGRIEPDEVDPDD
>NC_018012.1|WP_157174541.1|4870353_4871178_-|hypothetical-protein
MTALFGIQWWRLRRDRQKLEQTRRAIAGMLKQEIGRITSKPTARPELRKSRADCLAALAKPFKTRQLADEEAWRAVMENVGQCFDHLMRTTQEVSEPGHPSVLDASDDTDGLSTAELDSGIDSLLTGYQAGKSAIETNREATAELKRNYQQLQLANRNLRHKLQLDKNSDLWQLFETYERNNAVFMKTLSVKERSYNLLVKEFEALRESLQHLQAIIGNYRKSVHKLLLERSGLAEENKQLREQHEVTDRLVTRLNRNYDTLRNEYTKLFETIR
>NC_018012.1|WP_157174540.1|4869910_4870330_+|hypothetical-protein
MNDDAMAFLDVPVLFGRFLVLNDILSEADIAQAARVQKELNAYPLFRLIEQGTLTIEDVTRARAYQWKHMATFCEAVDALGILALDACTAAMTVLARQNIPLGEVLVRQGKMTPKALADALEKHRQYWESDSADVVDRT
>NC_018012.1|WP_014780670.1|4868669_4869911_+|glucose-1-phosphate-adenylyltransferase
MSADTLILVLAIDRGAGPDPLTIHRTKAAVPFGGKYRVIDFSLANCLHSGLRQVLVLTQYKSHSLHKHLRDGWSIFNPELREFITPVPPQMRESQEWYAGPVDAIRQNRYLIERNRASQVLVLDGGAVYRMDYAELARAHRESDAQITVAVRATADPGSATQARVTINDEERILGLTEPVMVDRRPDERGTEGDEHLETMGVYLFDKPFLLERLARIERGAISDNDLALDLIAPLTQDHRVCAYRFGQTRGRVTPDRYWSDLASIDDYYQANMALLLAQPPLDLYQPDWTINTYQGQYPPARTVPGAVTGNEGVFVNSMLAAGTVISGGGVNHSILFPRVRVNDGAIVEASILFDGVVVGEGAHLRHCIVEKDIEIPAGERIGFDAKRDRERFTVSREGVVIVSKGATVSEGE
>NC_018012.1|WP_014776993.1|4879750_4880935_-|ISAs1-family-transposase
MCDLSVERSIAHHFAPLDEPRSAIQRRHLLSEMIVITIAASFSGADGWVGVETFGQAKEAWLRTFLKLPAGIPSHDTFGRVFALIDPAQFAACFRQWSASVAELIPEEIIAVDGKTLRRSHSRGKGLAALHLVSAWATANRVVLGQVATDAKSNEITAIPRLLEWLKLEGCIVTIDAMGCQTKIAAQIIHQGGDYVLALKGNQETLAAEVEEAFIDADARGYAGVDSAFLETVERGHGRLETRRYQTLGDLSGVPHSASWEAMNMIGMVESRREVAGKVSVETRYFIGSIGTSAARFAHAVRGHWGIENGLHWNLDIAFREDECRVRDPVARENLAVLRHLALSRLKNDGTKLGIQNKRLKAGWDESYLSKLLFESPQRKGDADTSVPANVSSA
>NC_018012.1|WP_014776993.1|4882233_4883418_-|ISAs1-family-transposase
MCDLSVERSIAHHFAPLDEPRSAIQRRHLLSEMIVITIAASFSGADGWVGVETFGQAKEAWLRTFLKLPAGIPSHDTFGRVFALIDPAQFAACFRQWSASVAELIPEEIIAVDGKTLRRSHSRGKGLAALHLVSAWATANRVVLGQVATDAKSNEITAIPRLLEWLKLEGCIVTIDAMGCQTKIAAQIIHQGGDYVLALKGNQETLAAEVEEAFIDADARGYAGVDSAFLETVERGHGRLETRRYQTLGDLSGVPHSASWEAMNMIGMVESRREVAGKVSVETRYFIGSIGTSAARFAHAVRGHWGIENGLHWNLDIAFREDECRVRDPVARENLAVLRHLALSRLKNDGTKLGIQNKRLKAGWDESYLSKLLFESPQRKGDADTSVPANVSSA
>NC_018012.1|WP_014780680.1|4883452_4884019_-|CRISPR-associated-protein-Cas4
MSEPTGNWSLDTERTPMITPSEVLEHVYCPRFTWFMNVQNIPQHEETRFKVQKGREVHRRRATENREYLRRKIGAVKREIEVYLASPALRLRGIVDEVLWLKDGSLAPLDYKYTESRETVFKTHETQIVLYAMLIQEIYRQPVTRGYLAYIRDGSQLIEVAVTEEAMTQGNRINALAHTVRQSVLRPQ
>NC_018012.1|WP_014780681.1|4884015_4884321_-|CRISPR-associated-endonuclease-Cas2
MKTTETLVWIIYDIVEDKPRTKIAKRCKEAGLYRVQKSVFLGTLERNRLDELRLQIEELADAEVDSVYLFPMCEGDFKKVILLGQAFDKKLVTDEVRALFL
>NC_018012.1|WP_014780682.1|4884342_4885371_-|CRISPR-associated-endonuclease-Cas1
MDLILTTFGTYLHRQGEMFLIKVKEQKQEVSSRKVRSILITTGASLSTDAIQLAIEKNIDIVFLDQVGHPYGRVWHGRPGSTTAIRREQLRLADTEKGLRLAQGWLLRKFDNQIEFLREARQRRTRLSAALTEKRDALLELRQSLAAVTGDLDEVRGTIMGYEGRAGRTYWEAVNLLLPDNFQFAARSRNPAKDEFNCLLNYSYGVLYGTVERACILAGLDPYVGFVHTDHYQKKSLVFDLIECYRIWADETVVGLFAARKVKPDMFDPLQNGLILNKPGKAVLMERFGEYLDESIRYRNRNIKRRETVQLDCHRLANEWIGRPADEDDMFSPSPQRGEGLG
>NC_018012.1|WP_014780683.1|4885700_4886270_-|Uma2-family-endonuclease
MALNPQHRDNFEDWLTDERERLEERTEYVAGEVFAMTGATEPHNLIVTNIVRELSTQMKGRPCRVYANDLKVHIAPADACCYPDVLVICDAPDFHDQRRDVVRNPILIVEVLSKSTEADDRGDKFALYRHLPSLQAYLLVTQQRPQVEIYTRETDGRWIMSDVHGRDAQFNIAAIDANLSLAEIYDKVD
>NC_018012.1|WP_014780684.1|4886296_4887037_-|hypothetical-protein
MHPLAQIPLAQVELHWDRALSGGGETRTRQLRGALATAFREDDLFHQHDPLTGKSLYRYPKVQYRWHDGHGLILGWGDAASRLLGLPWLDLALRLGEDTVSVTDAALTLTHGQFAIGDRLAYYRIQTPVLLFNQDNYRRYRTLAERERRDERDRLLIAHLLTALRGLDIEFKGQLYAVFTQSIGHTCHYKGESLLGLRGEFVTNAILPVGFAFGHAVSHGYGEVIAMPGAPRKQEPAKSSRQSLAN
>NC_018012.1|WP_014780685.1|4887024_4887378_-|hypothetical-protein
MTNAFARWEEMPDVQTLLRGKVKQESFLVLNEEEDGLRRDLEAALAVKDRWDRREALRQLAAALQQRTVTVYARQGFHPEDYAEPIGPFWLLKPGYYHPDSGLDLRLDEEDPATCIL
>NC_018012.1|WP_041447215.1|4887499_4888609_+|IS5-family-transposase
MSKAGRPPKIHEAEQAVLRQIVTDRPTSTLSEIARELAARTGIEAHEATIRKSLREAGVTRLRGESGLEAQARATPRRYGYTDAHRRHDPDQSYPSCLTDAEWDLVAALFEMPGGRGQPPRVSRRSILEACCYVVRTGCAWRMLPHDFAPWQNVYKTFRRWSAAGKFEQMHDRLRGQWREREGREIAPTAAVLDAQSTRGSPQGGPSGFDAGKQVKGRKRSLVVDTLGFVLAVSVVAANLQDRDAASGAVADAAAKYPQINTLFVDSAYAGQFAQTTEQTHAIRVEVVRHPANKSVGSWHVDGAPDRVVIANADGFVPLPKRWVVERTHAWNERARRLIMHHDRLPAVSETWVWLAEARILLRRLTTTV
>NC_018012.1|WP_014780686.1|4888521_4889118_-|CRISPR-associated-protein-Cmr3
MSDSIQHWRFDPLDTWFFREARGFDTSGSNALSSLFPPPARTVAGALRTLIGEQQGVDWARFADAGEYADLKQIIGSGDDLGALRLTGPYPQWNDERLYPVPLHLLAKDDDYRFLAPGEEDAAVVCDLGRVRLPRIVEQPDKPLPGAKPQEDGWLTGENLQRVLRGCRQNQTVVVNRRSRMRASASQTQVSETAGRRS

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Crispr_ID: NC_018012_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018012_16

4881006-4881922

TypeIII

I-B

Consensus_repeat	Method
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CRT
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	PILER-CR
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CRISPRCasFinder

12 spacers

csx16,cas4,cas2,cas1,cas6,cmr3gr5,cas10

The CRISPR arrays of NC_018012_16

>merge|NC_018012|16|4881006-4881922|CRT,PILER-CR,CRISPRCasFinder
CGCTAATGCGTTGATGCGATTGCCCTGGTGCTGCAGCCACCCGCCACCGCTCAGGAGGATCTGACATGGCACGGTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCCTCGCCCGGGCATTTTCAAGAAGGACACTCCCCATGGTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCTGGTCTGAGCGTTCGGCGTAGCGGTTGACGCGCGACGTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCCCTCCGCTGGGACCATGAAGATTCCGCTTCTGATCGCGTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCTTTCCCACGCGGTCGGAACCCAGGCGCCATCACCGAAGGTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCGCCGAACCGAGACCAGACAGGAGAACGAGATGCACGTGTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCCCCATGACAGACCCGTATTGAGCAGAGATATCAGCAGTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCACCTCGCCGACCGCGTCCACCTCGGCACCTACCAAGTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCAGCACCGAACGCCAGACCGAAACCGCCATCCTTCGCGTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCGTCCTCCCCGAGGAACAGATGCGCTTTGATTTCAACACGTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCCCCCCAAGTGGTCGAGGATCTGTATGAAATCCTCGCGTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGCATGCGCTTGACGCCTTGGACGCATCAGACAGGAGCGTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC

>NC_018012|16|4|4881006-4881922|CRT
CGCTAATGCGTTGATGCGATTGCCCTGGTGCTGCAGC	CACCCGCCACCGCTCAGGAGGATCTGACATGGCACG
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CTCGCCCGGGCATTTTCAAGAAGGACACTCCCCATG
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	TGGTCTGAGCGTTCGGCGTAGCGGTTGACGCGCGAC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CCTCCGCTGGGACCATGAAGATTCCGCTTCTGATCGC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	TTTCCCACGCGGTCGGAACCCAGGCGCCATCACCGAAG
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	GCCGAACCGAGACCAGACAGGAGAACGAGATGCACGT
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CCCATGACAGACCCGTATTGAGCAGAGATATCAGCA
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	ACCTCGCCGACCGCGTCCACCTCGGCACCTACCAA
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	AGCACCGAACGCCAGACCGAAACCGCCATCCTTCGC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	GTCCTCCCCGAGGAACAGATGCGCTTTGATTTCAACAC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CCCCCAAGTGGTCGAGGATCTGTATGAAATCCTCGC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	ATGCGCTTGACGCCTTGGACGCATCAGACAGGAGC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC

>NC_018012|16|4|4881079-4881922|PILER-CR
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CTCGCCCGGGCATTTTCAAGAAGGACACTCCCCATG
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	TGGTCTGAGCGTTCGGCGTAGCGGTTGACGCGCGAC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CCTCCGCTGGGACCATGAAGATTCCGCTTCTGATCGC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	TTTCCCACGCGGTCGGAACCCAGGCGCCATCACCGAAG
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	GCCGAACCGAGACCAGACAGGAGAACGAGATGCACGT
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CCCATGACAGACCCGTATTGAGCAGAGATATCAGCA
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	ACCTCGCCGACCGCGTCCACCTCGGCACCTACCAA
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	AGCACCGAACGCCAGACCGAAACCGCCATCCTTCGC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	GTCCTCCCCGAGGAACAGATGCGCTTTGATTTCAACAC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CCCCCAAGTGGTCGAGGATCTGTATGAAATCCTCGC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	ATGCGCTTGACGCCTTGGACGCATCAGACAGGAGC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC

>NC_018012|16|16|4881079-4881922|CRISPRCasFinder
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CTCGCCCGGGCATTTTCAAGAAGGACACTCCCCATG
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	TGGTCTGAGCGTTCGGCGTAGCGGTTGACGCGCGAC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CCTCCGCTGGGACCATGAAGATTCCGCTTCTGATCGC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	TTTCCCACGCGGTCGGAACCCAGGCGCCATCACCGAAG
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	GCCGAACCGAGACCAGACAGGAGAACGAGATGCACGT
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CCCATGACAGACCCGTATTGAGCAGAGATATCAGCA
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	ACCTCGCCGACCGCGTCCACCTCGGCACCTACCAA
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	AGCACCGAACGCCAGACCGAAACCGCCATCCTTCGC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	GTCCTCCCCGAGGAACAGATGCGCTTTGATTTCAACAC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	CCCCCAAGTGGTCGAGGATCTGTATGAAATCCTCGC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC	ATGCGCTTGACGCCTTGGACGCATCAGACAGGAGC
GTTTCAATCCTTGTTGTATTGGATTGGGTGCTGCAGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_018012.1\|WP_157174542.1\|4878393_4878933_-\|SHOCT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378276
NC_018012.1\|WP_014776993.1\|4879750_4880935_-\|ISAs1-family-transposase	unknown	unknown	gnl\|CDD\|379382
NC_018012.1\|WP_014780673.1\|4871298_4872753_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238119
NC_018012.1\|WP_014780683.1\|4885700_4886270_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NC_018012.1\|WP_157174540.1\|4869910_4870330_+\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780685.1\|4887024_4887378_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780677.1\|4878019_4878367_+\|nitrous-oxide-stimulated-promoter-family-protein	unknown	unknown	gnl\|CDD\|371708
NC_018012.1\|WP_041447215.1\|4887499_4888609_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NC_018012.1\|WP_157174541.1\|4870353_4871178_-\|hypothetical-protein	unknown	unknown	unknown
NC_018012.1\|WP_014780682.1\|4884342_4885371_-\|CRISPR-associated-endonuclease-Cas1	cas1	pfam01867_cas1_CAS-I:CAS-II:CAS-III	gnl\|CDD\|376633
NC_018012.1\|WP_014780681.1\|4884015_4884321_-\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NC_018012.1\|WP_014780684.1\|4886296_4887037_-\|hypothetical-protein	cas6	cls000004_cas6_CAS-I:CAS-III	gnl\|CDD\|379957
NC_018012.1\|WP_014780675.1\|4873666_4875646_+\|HDOD-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NC_018012.1\|WP_014780676.1\|4875799_4877497_+\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NC_018012.1\|WP_014780686.1\|4888521_4889118_-\|CRISPR-associated-protein-Cmr3	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NC_018012.1\|WP_014780687.1\|4889114_4891064_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
NC_018012.1\|WP_157174685.1\|4872814_4873576_+\|endonuclease	unknown	unknown	gnl\|CDD\|225140
NC_018012.1\|WP_014776993.1\|4882233_4883418_-\|ISAs1-family-transposase	unknown	unknown	gnl\|CDD\|379382
NC_018012.1\|WP_014780680.1\|4883452_4884019_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NC_018012.1\|WP_083845802.1\|4879031_4879340_-\|CRISPR-associated-protein-Csx16	csx16	cd09695_csx16_CAS-I:CAS-III	gnl\|CDD\|370601

Protein	Function_ID	Function_description	E-value
NC_018012.1\|WP_157174542.1\|4878393_4878933_-\|SHOCT-domain-containing-protein	gnl\|CDD\|378276	pfam09851, SHOCT, Short C-terminal domain.	8.82497e-05
NC_018012.1\|WP_014776993.1\|4879750_4880935_-\|ISAs1-family-transposase	gnl\|CDD\|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	3.97845e-35
NC_018012.1\|WP_014780673.1\|4871298_4872753_-\|VWA-domain-containing-protein	gnl\|CDD\|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	1.83207e-14
NC_018012.1\|WP_014780683.1\|4885700_4886270_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	3.55311e-41
NC_018012.1\|WP_014780680.1\|4883452_4884019_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	3.126e-24
NC_018012.1\|WP_041447215.1\|4887499_4888609_+\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	1.15786e-27
NC_018012.1\|WP_014780677.1\|4878019_4878367_+\|nitrous-oxide-stimulated-promoter-family-protein	gnl\|CDD\|371708	pfam11756, YgbA_NO, Nitrous oxide-stimulated promoter. The function of ygaB is not known but it is a promoter that is stimulated by the presence of nitrous oxide. It is regulated by the gene-product of the bacterial nsrR gene.	5.31203e-54
NC_018012.1\|WP_014780682.1\|4884342_4885371_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.66713e-92
NC_018012.1\|WP_014780681.1\|4884015_4884321_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.8442e-21
NC_018012.1\|WP_014780684.1\|4886296_4887037_-\|hypothetical-protein	gnl\|CDD\|379957	pfam17262, DUF5328, Family of unknown function (DUF5328). This family of unknown function can be found in Bacteria and Archaea. Some of the proteins in this family are annotated in UniProt as putative DNA repair proteins.	1.05442e-44
NC_018012.1\|WP_014780675.1\|4873666_4875646_+\|HDOD-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	6.44285e-56
NC_018012.1\|WP_014780676.1\|4875799_4877497_+\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	2.24266e-53
NC_018012.1\|WP_014780686.1\|4888521_4889118_-\|CRISPR-associated-protein-Cmr3	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.24045e-28
NC_018012.1\|WP_014780687.1\|4889114_4891064_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	3.18031e-56
NC_018012.1\|WP_157174685.1\|4872814_4873576_+\|endonuclease	gnl\|CDD\|225140	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair].	3.13948e-87
NC_018012.1\|WP_014776993.1\|4882233_4883418_-\|ISAs1-family-transposase	gnl\|CDD\|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	3.97845e-35
NC_018012.1\|WP_083845802.1\|4879031_4879340_-\|CRISPR-associated-protein-Csx16	gnl\|CDD\|370601	pfam09652, Cas_VVA1548, Putative CRISPR-associated protein (Cas_VVA1548). This entry represents a conserved region of about 95 amino acids found exclusively in species with CRISPRs (Clustered Regularly Interspaced Short Palindromic Repeats). In all bacterial species that contain this entry, the genes encoding the proteins are in the midst of a cluster of cas (CRISPR-associated) genes.	1.02306e-21

>NC_018012.1|WP_014776993.1|4879750_4880935_-|ISAs1-family-transposase
MCDLSVERSIAHHFAPLDEPRSAIQRRHLLSEMIVITIAASFSGADGWVGVETFGQAKEAWLRTFLKLPAGIPSHDTFGRVFALIDPAQFAACFRQWSASVAELIPEEIIAVDGKTLRRSHSRGKGLAALHLVSAWATANRVVLGQVATDAKSNEITAIPRLLEWLKLEGCIVTIDAMGCQTKIAAQIIHQGGDYVLALKGNQETLAAEVEEAFIDADARGYAGVDSAFLETVERGHGRLETRRYQTLGDLSGVPHSASWEAMNMIGMVESRREVAGKVSVETRYFIGSIGTSAARFAHAVRGHWGIENGLHWNLDIAFREDECRVRDPVARENLAVLRHLALSRLKNDGTKLGIQNKRLKAGWDESYLSKLLFESPQRKGDADTSVPANVSSA
>NC_018012.1|WP_083845802.1|4879031_4879340_-|CRISPR-associated-protein-Csx16
MKPAPTSGYDIRCLDPTIIQPGDTLIGSLPVNLSAEIRERGGRYPHLSLDLPAPLRGQELSAAQTRDHGHGSRNFASGGATSSRLTATQACGSGQTRCGGVS
>NC_018012.1|WP_157174542.1|4878393_4878933_-|SHOCT-domain-containing-protein
MRDGDPRHQRHPGHQKARLTSSPPQTGATVTRGTNDTLVIETDPPGADVKLSNGMVGKTPATFKLPRKDSLVVDLHKVGYEAVKVNVRPQISGAGGAGMAGNVLLGGIIGVAVDAGTGAMNDLKPNPIHVRLSRLDDDLGEASVDGVEQRMATLKTMRQSGLLTEAEYRRKRTALLSRL
>NC_018012.1|WP_014780677.1|4878019_4878367_+|nitrous-oxide-stimulated-promoter-family-protein
MSAGRRIIREKKTIAAMMAIYCRDHHATAGGLCADCAGLLDYAQRRLDTCLFQEEKPACNLCEVHCYAPLQRERVRVIMRDAGPRMPWPHPILSLGHLLDKWRPAPKLKDRKRER
>NC_018012.1|WP_014780676.1|4875799_4877497_+|GMC-family-oxidoreductase
MTTDCDVCIIGSGAGGAPVAYTLATAGQSVIVLEKGPWLRDEHFYKDELACCRRSVYTPELRHEQHVIEEPDGEGGWTATPTSESGWDFWNGNLVGGSSNLMSGFFHRLKPVDFRQLSELGPIAGANRVDWPIGYADLEPYYDLVERLIGVSGTITPHPGQEPRSSPDFPYPPTAEHPVSAWIDDACATLGVHSLRVPRAILSRPDLGRRACEYSGYCGSFGCASGAKGGARAALLDPAFATGRCQIRPKAKVHRLLSDPRGRVTAAEYVDADGRLQRVTAKRFVVACQAVETSRLLLNSPGPRFPNGLANNQGQVGRNLLFSAGGSGSGDLEYARLTPERAAQLKVMGPFVNRALDDWYLIEDPDFAPGRHKGGIVEFLLAHPNPTGKANRAKWRDGELLWGAPLKRRLEQWFRTDRTLRFEVFGDWLPTDDCRVTLDPQFKDRWGQPVARIRIGHHPHDLEVGRYLATRGERVLRELGAVRVSSSVSGAPPANLMAGGCRFGTDPATSVLDPDCRAHEVENLYVTDGSFMPTGGSVPYTWTIYANALRVADRMLGRRLETARA
>NC_018012.1|WP_014780675.1|4873666_4875646_+|HDOD-domain-containing-protein
MDDPDRNAQAVRAALRGEVSELLPAPAAAVKLLQLTRDEDAGVGAISHVIETEPALAAKVLRIVNSAFYGFPRHIRSIHRAVTLLGLSAVRQAALHLLFYEGLIQRGDKGVFDRLYFWQHSLLVAILSRDMAERLEHPDPDSLYAAGLLHDLGKMILESHGRVRYSDFLAASSNSGNPVREDEQTYFGVSHDTVGAVIGERWQLPELICRVQRLHHSSFSDAGLTPLQAQEVAIVVLADFIAWTQGIGSTNTRGSPALSPDVVTLVPLERIDLPDILERADKEISEIGAFYGLQFPSSQQLRANLVSTVIGLSRADSGHRAPMPAGSRASYTAPHHSLDPDEFIPRTLEALQREFGIRRLLMMQIEPKRRSLVATHALPAPMSSNPRPPLELAILTLSGDLVRCLREHRPTLIRESPENAEILASLEASEAAVVPVMNHGRLLGVLCLSNGRDEAPVGIGPLAEVMRVASELGIALERSRIFAQERAKAEIDPLTRLHNRSAMERFLNQSFRQAAESGRRFAVGLLDIDRFKVFNDSFGHQAGDDVLRIVADTMRSLTRPGDFLGRYGGEEFLFVLLDASEQTALVYAERIRKEIERRGQMLQERFPGHALTASVGVAINDSRYPGPREIVAAADAALYRAKETGRNRVVPAWRLSNAS
>NC_018012.1|WP_157174685.1|4872814_4873576_+|endonuclease
MATLQSARRVDRESLTDRSAPLRRQVNHLEFDEGRLRWVHAALFAAYGHQHWWPAESPFEVMIGAVLTQNTAWSNVERALARLSASSALEPAAILALDPAELAEALRPAGYFNLKARRLSAFCVEYLAAGGLEGWGALDTETLRRALLKVNGIGPETADDMLLYAFERPVFVVDAYTRRIFARLGAIAGDEAYEQIRAGFEQTLGPDVPLFKEYHALIVQHAKQACRARPICPDCPLREACPAALAPSLHAKM
>NC_018012.1|WP_014780673.1|4871298_4872753_-|VWA-domain-containing-protein
MTCKPVAVRLNLLALLAILTCMPAEAVDVVLTLDRSLSMKANDPNRDSTKGAELFGELLGAEDRLALTTFAQESERLLALTPLSGTGTRERVSSLIKQVRMDGIRTNFEAALRTAYRLYPDQPPDPANERVLVLFSDGQLNLGNEDANQTSRAAVIKEIIPKFQAAGIRILGVAFSPEADLAFLRRLADATGGQAFRADKPADIYDAFVRLFEQTDQPLTAPVIDGEVKVDANVRELKLLVKRDTGDGPMQLTDPSGRTFGVDEQTPGVDWKSTPYFDRISIQQPEAGSWKVTSDNADKKAYIESDLDLHATLPVLASLDETVTVVAKLLYRGVAVDPSLMKNTRFTATSLDASGVIQQQLELQPGASDPTARNYRGTFAFSTPGLFQVRVSAEGVDFQRQKTYFLTILGTEQPESANAQAGAGSPDNATDADSPDSDPSNQRAAFFMLLLGNLGLLALAGVGVGVWWWRRRGRIEPDEVDPDD
>NC_018012.1|WP_157174541.1|4870353_4871178_-|hypothetical-protein
MTALFGIQWWRLRRDRQKLEQTRRAIAGMLKQEIGRITSKPTARPELRKSRADCLAALAKPFKTRQLADEEAWRAVMENVGQCFDHLMRTTQEVSEPGHPSVLDASDDTDGLSTAELDSGIDSLLTGYQAGKSAIETNREATAELKRNYQQLQLANRNLRHKLQLDKNSDLWQLFETYERNNAVFMKTLSVKERSYNLLVKEFEALRESLQHLQAIIGNYRKSVHKLLLERSGLAEENKQLREQHEVTDRLVTRLNRNYDTLRNEYTKLFETIR
>NC_018012.1|WP_157174540.1|4869910_4870330_+|hypothetical-protein
MNDDAMAFLDVPVLFGRFLVLNDILSEADIAQAARVQKELNAYPLFRLIEQGTLTIEDVTRARAYQWKHMATFCEAVDALGILALDACTAAMTVLARQNIPLGEVLVRQGKMTPKALADALEKHRQYWESDSADVVDRT
>NC_018012.1|WP_014776993.1|4882233_4883418_-|ISAs1-family-transposase
MCDLSVERSIAHHFAPLDEPRSAIQRRHLLSEMIVITIAASFSGADGWVGVETFGQAKEAWLRTFLKLPAGIPSHDTFGRVFALIDPAQFAACFRQWSASVAELIPEEIIAVDGKTLRRSHSRGKGLAALHLVSAWATANRVVLGQVATDAKSNEITAIPRLLEWLKLEGCIVTIDAMGCQTKIAAQIIHQGGDYVLALKGNQETLAAEVEEAFIDADARGYAGVDSAFLETVERGHGRLETRRYQTLGDLSGVPHSASWEAMNMIGMVESRREVAGKVSVETRYFIGSIGTSAARFAHAVRGHWGIENGLHWNLDIAFREDECRVRDPVARENLAVLRHLALSRLKNDGTKLGIQNKRLKAGWDESYLSKLLFESPQRKGDADTSVPANVSSA
>NC_018012.1|WP_014780680.1|4883452_4884019_-|CRISPR-associated-protein-Cas4
MSEPTGNWSLDTERTPMITPSEVLEHVYCPRFTWFMNVQNIPQHEETRFKVQKGREVHRRRATENREYLRRKIGAVKREIEVYLASPALRLRGIVDEVLWLKDGSLAPLDYKYTESRETVFKTHETQIVLYAMLIQEIYRQPVTRGYLAYIRDGSQLIEVAVTEEAMTQGNRINALAHTVRQSVLRPQ
>NC_018012.1|WP_014780681.1|4884015_4884321_-|CRISPR-associated-endonuclease-Cas2
MKTTETLVWIIYDIVEDKPRTKIAKRCKEAGLYRVQKSVFLGTLERNRLDELRLQIEELADAEVDSVYLFPMCEGDFKKVILLGQAFDKKLVTDEVRALFL
>NC_018012.1|WP_014780682.1|4884342_4885371_-|CRISPR-associated-endonuclease-Cas1
MDLILTTFGTYLHRQGEMFLIKVKEQKQEVSSRKVRSILITTGASLSTDAIQLAIEKNIDIVFLDQVGHPYGRVWHGRPGSTTAIRREQLRLADTEKGLRLAQGWLLRKFDNQIEFLREARQRRTRLSAALTEKRDALLELRQSLAAVTGDLDEVRGTIMGYEGRAGRTYWEAVNLLLPDNFQFAARSRNPAKDEFNCLLNYSYGVLYGTVERACILAGLDPYVGFVHTDHYQKKSLVFDLIECYRIWADETVVGLFAARKVKPDMFDPLQNGLILNKPGKAVLMERFGEYLDESIRYRNRNIKRRETVQLDCHRLANEWIGRPADEDDMFSPSPQRGEGLG
>NC_018012.1|WP_014780683.1|4885700_4886270_-|Uma2-family-endonuclease
MALNPQHRDNFEDWLTDERERLEERTEYVAGEVFAMTGATEPHNLIVTNIVRELSTQMKGRPCRVYANDLKVHIAPADACCYPDVLVICDAPDFHDQRRDVVRNPILIVEVLSKSTEADDRGDKFALYRHLPSLQAYLLVTQQRPQVEIYTRETDGRWIMSDVHGRDAQFNIAAIDANLSLAEIYDKVD
>NC_018012.1|WP_014780684.1|4886296_4887037_-|hypothetical-protein
MHPLAQIPLAQVELHWDRALSGGGETRTRQLRGALATAFREDDLFHQHDPLTGKSLYRYPKVQYRWHDGHGLILGWGDAASRLLGLPWLDLALRLGEDTVSVTDAALTLTHGQFAIGDRLAYYRIQTPVLLFNQDNYRRYRTLAERERRDERDRLLIAHLLTALRGLDIEFKGQLYAVFTQSIGHTCHYKGESLLGLRGEFVTNAILPVGFAFGHAVSHGYGEVIAMPGAPRKQEPAKSSRQSLAN
>NC_018012.1|WP_014780685.1|4887024_4887378_-|hypothetical-protein
MTNAFARWEEMPDVQTLLRGKVKQESFLVLNEEEDGLRRDLEAALAVKDRWDRREALRQLAAALQQRTVTVYARQGFHPEDYAEPIGPFWLLKPGYYHPDSGLDLRLDEEDPATCIL
>NC_018012.1|WP_041447215.1|4887499_4888609_+|IS5-family-transposase
MSKAGRPPKIHEAEQAVLRQIVTDRPTSTLSEIARELAARTGIEAHEATIRKSLREAGVTRLRGESGLEAQARATPRRYGYTDAHRRHDPDQSYPSCLTDAEWDLVAALFEMPGGRGQPPRVSRRSILEACCYVVRTGCAWRMLPHDFAPWQNVYKTFRRWSAAGKFEQMHDRLRGQWREREGREIAPTAAVLDAQSTRGSPQGGPSGFDAGKQVKGRKRSLVVDTLGFVLAVSVVAANLQDRDAASGAVADAAAKYPQINTLFVDSAYAGQFAQTTEQTHAIRVEVVRHPANKSVGSWHVDGAPDRVVIANADGFVPLPKRWVVERTHAWNERARRLIMHHDRLPAVSETWVWLAEARILLRRLTTTV
>NC_018012.1|WP_014780686.1|4888521_4889118_-|CRISPR-associated-protein-Cmr3
MSDSIQHWRFDPLDTWFFREARGFDTSGSNALSSLFPPPARTVAGALRTLIGEQQGVDWARFADAGEYADLKQIIGSGDDLGALRLTGPYPQWNDERLYPVPLHLLAKDDDYRFLAPGEEDAAVVCDLGRVRLPRIVEQPDKPLPGAKPQEDGWLTGENLQRVLRGCRQNQTVVVNRRSRMRASASQTQVSETAGRRS
>NC_018012.1|WP_014780687.1|4889114_4891064_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MTTPTTFHFTLGPVQGFVAQARRTRDFWAGSFLLSWLAGAAMQAVKEQGGEIKFPKPEDGYLHWLTGKGQGEAPRQGCIPNRFKAIQAKVPSDFDPLKIEQAVCGAWLALAEAVWQRDLQPHVPDPEQARAIWERQCAQFWDIAWALGNDDALLDRRKNWRTQLPPDEAGVKCSMMAGWQELSGATHPKDERLTAFWKPFREPLRKEFNRDFDPDEALCAIAFIKRRFVKGFADLRVSMPGGWTLHGWRVDGQMPSTLDLAAAHWVAQLNNVHEDVLKSLAATVELLLEVSPLLGTSDGGLGKLRCVRDTGQESLKRLHSSALFAHVLDNRKLCPDRERVKAVRQALKALGQATPPSPFYAILRMDGDSLGQLLQSDPEAPPKISEALNTFTAAVPKIVDDRNGFLIYAGGDDVLALLPLEDALGCATAIRASYLAAFRQAFHGDGRSTISAAVTFAHVKIPLTRMLRDSHQLLDDIAKDATGRDALAVRVAKASGEALQWARPWEKAFCQTQPHRLEIECLADDFANAANRSADATDRAAFSSKFFYKIRERFEFLNPSGDPSSALFNEQDARSLLAVDYLASGVNDGRRDKLKIADAERLIAPLLEQCHPVTRLNDAGSLTFPLSNCLEPDGALLVRFLAQKGVETQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_018012_6	6.1\|1764732\|32\|NC_018012\|CRISPRCasFinder	1764732-1764763	32	NC_018012.1	752340-752371	0	1.0
NC_018012_10	10.2\|2830468\|19\|NC_018012\|CRISPRCasFinder	2830468-2830486	19	NC_018012.1	3271813-3271831	0	1.0

1. spacer 6.1|1764732|32|NC_018012|CRISPRCasFinder matches to position: 752340-752371, mismatch: 0, identity: 1.0

ccgaccaggccatgtatcaggccaagctatcc	CRISPR spacer
ccgaccaggccatgtatcaggccaagctatcc	Protospacer
********************************

2. spacer 10.2|2830468|19|NC_018012|CRISPRCasFinder matches to position: 3271813-3271831, mismatch: 0, identity: 1.0

gttcctcgttgaccgattg	CRISPR spacer
gttcctcgttgaccgattg	Protospacer
*******************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_018012_10	10.1\|2830426\|19\|NC_018012\|CRISPRCasFinder	2830426-2830444	19	NZ_CP025805	Sulfitobacter sp. SK012 plasmid unnamed1, complete sequence	25527-25545	0	1.0
NC_018012_10	10.2\|2830468\|19\|NC_018012\|CRISPRCasFinder	2830468-2830486	19	NZ_CP020911	Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence	78323-78341	0	1.0
NC_018012_10	10.2\|2830468\|19\|NC_018012\|CRISPRCasFinder	2830468-2830486	19	NZ_CP040759	Paracoccus sp. 2251 plasmid unnamed8, complete sequence	15125-15143	0	1.0
NC_018012_10	10.2\|2830468\|19\|NC_018012\|CRISPRCasFinder	2830468-2830486	19	NZ_CP054022	Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence	1075654-1075672	0	1.0
NC_018012_10	10.2\|2830468\|19\|NC_018012\|CRISPRCasFinder	2830468-2830486	19	NZ_CP054032	Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence	900569-900587	0	1.0
NC_018012_2	2.42\|482679\|32\|NC_018012\|CRISPRCasFinder,CRT	482679-482710	32	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1074527-1074558	4	0.875
NC_018012_2	2.42\|482679\|32\|NC_018012\|CRISPRCasFinder,CRT	482679-482710	32	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	676257-676288	4	0.875
NC_018012_2	2.42\|482679\|32\|NC_018012\|CRISPRCasFinder,CRT	482679-482710	32	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	333513-333544	4	0.875
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	NZ_LR134470	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 28, complete sequence	21007-21038	5	0.844
NC_018012_2	2.29\|481882\|32\|NC_018012\|CRISPRCasFinder,CRT	481882-481913	32	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	233852-233883	5	0.844
NC_018012_2	2.29\|481882\|32\|NC_018012\|CRISPRCasFinder,CRT	481882-481913	32	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	258179-258210	5	0.844
NC_018012_2	2.29\|481882\|32\|NC_018012\|CRISPRCasFinder,CRT	481882-481913	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1642887-1642918	5	0.844
NC_018012_2	2.29\|481882\|32\|NC_018012\|CRISPRCasFinder,CRT	481882-481913	32	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	233861-233892	5	0.844
NC_018012_2	2.29\|481882\|32\|NC_018012\|CRISPRCasFinder,CRT	481882-481913	32	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1762086-1762117	5	0.844
NC_018012_2	2.29\|481882\|32\|NC_018012\|CRISPRCasFinder,CRT	481882-481913	32	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	1762032-1762063	5	0.844
NC_018012_2	2.29\|481882\|32\|NC_018012\|CRISPRCasFinder,CRT	481882-481913	32	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1754166-1754197	5	0.844
NC_018012_2	2.29\|481882\|32\|NC_018012\|CRISPRCasFinder,CRT	481882-481913	32	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	256455-256486	5	0.844
NC_018012_2	2.29\|481882\|32\|NC_018012\|CRISPRCasFinder,CRT	481882-481913	32	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1692946-1692977	5	0.844
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP010421	Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence	275166-275197	5	0.844
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	357514-357545	6	0.812
NC_018012_2	2.14\|480967\|32\|NC_018012\|CRISPRCasFinder,CRT	480967-480998	32	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	328630-328661	6	0.812
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	836868-836899	6	0.812
NC_018012_2	2.25\|481638\|32\|NC_018012\|CRISPRCasFinder,CRT	481638-481669	32	NZ_AP014706	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence	185171-185202	6	0.812
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	320379-320410	6	0.812
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	224484-224515	6	0.812
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	765041-765072	6	0.812
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	421766-421797	6	0.812
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	503715-503746	6	0.812
NC_018012_4	4.7\|1162019\|32\|NC_018012\|CRISPRCasFinder,CRT	1162019-1162050	32	KR093634	Moraxella phage Mcat10, complete genome	3544-3575	6	0.812
NC_018012_4	4.7\|1162019\|32\|NC_018012\|CRISPRCasFinder,CRT	1162019-1162050	32	KR093635	Moraxella phage Mcat11, complete genome	3544-3575	6	0.812
NC_018012_6	6.1\|1764732\|32\|NC_018012\|CRISPRCasFinder	1764732-1764763	32	NZ_CP005085	Sphingobium sp. TKS plasmid pTK1, complete sequence	391920-391951	6	0.812
NC_018012_6	6.1\|1764732\|32\|NC_018012\|CRISPRCasFinder	1764732-1764763	32	NZ_CP042999	Aquisphaera giovannonii strain OJF2 plasmid pOJF2_2, complete sequence	18872-18903	6	0.812
NC_018012_6	6.1\|1764732\|32\|NC_018012\|CRISPRCasFinder	1764732-1764763	32	NZ_CP049319	Caballeronia sp. SBC2 plasmid pSBC2-3, complete sequence	582354-582385	6	0.812
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	113886-113917	6	0.812
NC_018012_2	2.2\|480235\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480235-480266	32	MN734439	Sphingomonas phage Kharn, complete genome	29903-29934	7	0.781
NC_018012_2	2.2\|480235\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480235-480266	32	MN734438	Sphingomonas phage Lucius, complete genome	29263-29294	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MT451985	Microbacterium phage Dothraki, complete genome	1847-1878	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MT771350	Microbacterium phage TatarkaPM, complete genome	1847-1878	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MN062709	Microbacterium phage Stanktossa, complete genome	1847-1878	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MT310866	Microbacterium phage Pherferi, complete genome	1847-1878	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MH153802	Microbacterium phage Gargoyle, complete genome	1847-1878	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MT553343	Microbacterium Phage ParleG, complete genome	1847-1878	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MH153805	Microbacterium phage Martin, complete genome	1847-1878	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MT553341	Microbacterium phage Kurt1, complete genome	1847-1878	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MH513981	Microbacterium phage Papafritta, complete genome	1847-1878	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MK620902	Microbacterium phage Phriends, complete genome	1847-1878	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MG920061	Microbacterium phage Bonino, complete genome	1847-1878	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MK620905	Microbacterium phage TinSulphur, complete genome	1847-1878	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MT553339	Microbacterium phage Lovelyunicorn, complete genome	1847-1878	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MG944222	Microbacterium phage StingRay, complete genome	1847-1878	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MT310861	Microbacterium phage BeautPeep30, complete genome	1847-1878	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MK919471	Microbacterium phage Shee, complete genome	1847-1878	7	0.781
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MT024864	Microbacterium phage Oxtober96, complete genome	1847-1878	7	0.781
NC_018012_2	2.6\|480479\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480479-480510	32	NZ_CP045548	Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence	120130-120161	7	0.781
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	362432-362463	7	0.781
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP046574	Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence	361251-361282	7	0.781
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	161326-161357	7	0.781
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	167173-167204	7	0.781
NC_018012_2	2.10\|480723\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480723-480754	32	NZ_CP015231	Epibacterium mobile F1926 plasmid unnamed1, complete sequence	110302-110333	7	0.781
NC_018012_2	2.11\|480784\|32\|NC_018012\|CRISPRCasFinder,CRT	480784-480815	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1930525-1930556	7	0.781
NC_018012_2	2.11\|480784\|32\|NC_018012\|CRISPRCasFinder,CRT	480784-480815	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	219095-219126	7	0.781
NC_018012_2	2.14\|480967\|32\|NC_018012\|CRISPRCasFinder,CRT	480967-480998	32	NZ_CP030914	Pseudomonas aeruginosa strain Y89 plasmid pY89, complete sequence	80098-80129	7	0.781
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	NC_020275	Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong1, complete sequence	28114-28145	7	0.781
NC_018012_2	2.25\|481638\|32\|NC_018012\|CRISPRCasFinder,CRT	481638-481669	32	NZ_AP014706	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence	328888-328919	7	0.781
NC_018012_2	2.32\|482069\|32\|NC_018012\|CRISPRCasFinder,CRT	482069-482100	32	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	528471-528502	7	0.781
NC_018012_2	2.32\|482069\|32\|NC_018012\|CRISPRCasFinder,CRT	482069-482100	32	NZ_CP054616	Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence	482223-482254	7	0.781
NC_018012_2	2.34\|482191\|32\|NC_018012\|CRISPRCasFinder,CRT	482191-482222	32	NZ_CP020950	Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence	41225-41256	7	0.781
NC_018012_2	2.37\|482374\|32\|NC_018012\|CRISPRCasFinder,CRT	482374-482405	32	NZ_CP024714	Pseudomonas syringae pv. actinidiae strain MAFF212063 plasmid pMAFF212063-B, complete sequence	17346-17377	7	0.781
NC_018012_2	2.37\|482374\|32\|NC_018012\|CRISPRCasFinder,CRT	482374-482405	32	NZ_CP041755	Pseudomonas sp. KBS0707 plasmid unnamed1, complete sequence	43092-43123	7	0.781
NC_018012_2	2.37\|482374\|32\|NC_018012\|CRISPRCasFinder,CRT	482374-482405	32	NZ_CP029358	Azospirillum sp. CFH 70021 plasmid unnamed3	351932-351963	7	0.781
NC_018012_2	2.37\|482374\|32\|NC_018012\|CRISPRCasFinder,CRT	482374-482405	32	NC_007274	Pseudomonas savastanoi pv. phaseolicola 1448A plasmid large, complete sequence	43372-43403	7	0.781
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	691984-692015	7	0.781
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	51773-51804	7	0.781
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_CP022999	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence	864427-864458	7	0.781
NC_018012_2	2.43\|482740\|32\|NC_018012\|CRISPRCasFinder,CRT	482740-482771	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1747941-1747972	7	0.781
NC_018012_2	2.44\|482801\|32\|NC_018012\|CRISPRCasFinder,CRT	482801-482832	32	MN657140	Cryobacterium sp. strain ANT_H26B plasmid pA26BH1, complete sequence	24071-24102	7	0.781
NC_018012_2	2.44\|482801\|32\|NC_018012\|CRISPRCasFinder,CRT	482801-482832	32	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	446116-446147	7	0.781
NC_018012_4	4.3\|1161775\|32\|NC_018012\|CRISPRCasFinder,CRT	1161775-1161806	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	212900-212931	7	0.781
NC_018012_4	4.9\|1162141\|32\|NC_018012\|CRISPRCasFinder,CRT	1162141-1162172	32	NZ_CP034185	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence	275556-275587	7	0.781
NC_018012_4	4.25\|1162024\|33\|NC_018012\|PILER-CR	1162024-1162056	33	KR093634	Moraxella phage Mcat10, complete genome	3543-3575	7	0.788
NC_018012_4	4.25\|1162024\|33\|NC_018012\|PILER-CR	1162024-1162056	33	KR093635	Moraxella phage Mcat11, complete genome	3543-3575	7	0.788
NC_018012_6	6.1\|1764732\|32\|NC_018012\|CRISPRCasFinder	1764732-1764763	32	NC_015169	Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence	218259-218290	7	0.781
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_LR594668	Variovorax sp. SRS16 plasmid 3	131319-131350	7	0.781
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP035002	Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence	204679-204710	7	0.781
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NC_011892	Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete sequence	452887-452918	7	0.781
NC_018012_15	15.6\|4879519\|35\|NC_018012\|CRT,PILER-CR	4879519-4879553	35	KT591491	Mycobacterium phage Bricole, complete genome	75440-75474	7	0.8
NC_018012_15	15.6\|4879519\|35\|NC_018012\|CRT,PILER-CR	4879519-4879553	35	NC_021299	Mycobacterium phage PegLeg, complete genome	75264-75298	7	0.8
NC_018012_15	15.6\|4879519\|35\|NC_018012\|CRT,PILER-CR	4879519-4879553	35	MN586024	Mycobacterium phage TyDawg, complete genome	75296-75330	7	0.8
NC_018012_15	15.6\|4879519\|35\|NC_018012\|CRT,PILER-CR	4879519-4879553	35	MK937612	Mycobacterium phage LilhomieP, complete genome	75380-75414	7	0.8
NC_018012_15	15.6\|4879519\|35\|NC_018012\|CRT,PILER-CR	4879519-4879553	35	MH697587	Mycobacterium phage IPhane7, complete genome	75293-75327	7	0.8
NC_018012_15	15.6\|4879519\|35\|NC_018012\|CRT,PILER-CR	4879519-4879553	35	NC_041970	Mycobacterium phage Bongo, complete genome	74534-74568	7	0.8
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	NZ_KU254577	Pseudomonas aeruginosa strain HN39 plasmid pHN39-SIM, complete sequence	240123-240154	8	0.75
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	CP031732	Stenotrophomonas rhizophila strain GA1 plasmid unnamed3, complete sequence	220448-220479	8	0.75
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	NZ_AP015031	Pseudomonas putida strain KF715 plasmid pKF715B, complete sequence	254663-254694	8	0.75
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	767059-767090	8	0.75
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	KJ028219	Mycobacterium phage 32HC, complete genome	47382-47413	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	98220-98251	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MF373843	Mycobacterium phage StevieRay, complete genome	9633-9664	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MT024866	Mycobacterium phage Willsammy, complete genome	9648-9679	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MN892486	Mycobacterium phage KilKor, complete genome	9645-9676	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MK814758	Mycobacterium phage FirstPlacePfu, complete genome	9642-9673	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MK494122	Mycobacterium phage GreaseLightnin, complete genome	9642-9673	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MN010757	Mycobacterium phage HUHilltop, complete genome	9642-9673	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MN908683	Mycobacterium phage StressBall, complete genome	9645-9676	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MK524508	Mycobacterium phage Zilizebeth, complete genome	9642-9673	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MN096356	Mycobacterium phage Bunnies, complete genome	9658-9689	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MK820639	Mycobacterium phage Phineas, complete genome	9630-9661	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MN892484	Mycobacterium phage CactusJack, complete genome	9645-9676	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MT498061	Mycobacterium phage Jung, complete genome	9670-9701	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MF133446	Mycobacterium phage Bogie, complete genome	9360-9391	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	KT347313	Mycobacterium phage Brusacoram, complete genome	9645-9676	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MF140399	Mycobacterium phage Bartholomew, complete genome	9642-9673	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MH230879	Mycobacterium phage Xavia, complete genome	9646-9677	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MN807249	Mycobacterium phage Megiddo, complete genome	9645-9676	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MK937604	Mycobacterium phage Necropolis, complete genome	9642-9673	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NC_041969	Mycobacterium phage Jebeks, complete genome	9627-9658	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	KC691256	Mycobacterium phage Fishburne, complete genome	9642-9673	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MN807250	Mycobacterium phage Glaske, complete genome	9645-9676	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MF281061	Mycobacterium phage Ksquared, complete genome	9658-9689	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	KU985090	Mycobacterium phage Shipwreck, complete genome	9338-9369	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MN585977	Mycobacterium phage Atcoo, complete genome	9646-9677	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MG198785	Mycobacterium phage Thespis, complete genome	9645-9676	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MN807248	Mycobacterium phage Phalm, complete genome	9645-9676	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP053441	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence	139141-139172	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	92679-92710	8	0.75
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP041653	Streptomyces sp. RLB1-9 plasmid pRLB1-9.1, complete sequence	143963-143994	8	0.75
NC_018012_2	2.10\|480723\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480723-480754	32	NZ_CP049734	Rhizobium leguminosarum strain A1 plasmid unnamed1, complete sequence	255165-255196	8	0.75
NC_018012_2	2.10\|480723\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480723-480754	32	CP049734	Rhizobium leguminosarum strain A1 plasmid pRLa11, complete sequence	43897-43928	8	0.75
NC_018012_2	2.10\|480723\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480723-480754	32	NZ_CP030762	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed2, complete sequence	284943-284974	8	0.75
NC_018012_2	2.10\|480723\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480723-480754	32	NZ_CP054024	Rhizobium sp. JKLM12A2 plasmid pPR12A203, complete sequence	281126-281157	8	0.75
NC_018012_2	2.10\|480723\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480723-480754	32	NZ_CP054035	Rhizobium sp. JKLM13E plasmid pPR13E04, complete sequence	209779-209810	8	0.75
NC_018012_2	2.12\|480845\|32\|NC_018012\|CRISPRCasFinder,CRT	480845-480876	32	NZ_CP022191	Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence	226515-226546	8	0.75
NC_018012_2	2.14\|480967\|32\|NC_018012\|CRISPRCasFinder,CRT	480967-480998	32	NZ_AP015030	Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence	67557-67588	8	0.75
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	34251-34282	8	0.75
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NZ_CP014276	Martelella sp. AD-3 plasmid unnamed1, complete sequence	208111-208142	8	0.75
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	461904-461935	8	0.75
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NC_011961	Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence	850055-850086	8	0.75
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	NZ_CP024940	Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence	517603-517634	8	0.75
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	NZ_CP031226	Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence	798665-798696	8	0.75
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1081149-1081180	8	0.75
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	NC_008243	Chelativorans sp. BNC1 plasmid 2, complete sequence	26224-26255	8	0.75
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	NZ_CP040763	Paracoccus sp. 2251 plasmid unnamed4, complete sequence	236923-236954	8	0.75
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	797880-797911	8	0.75
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	756928-756959	8	0.75
NC_018012_2	2.20\|481333\|32\|NC_018012\|CRISPRCasFinder,CRT	481333-481364	32	NZ_CP022191	Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence	226515-226546	8	0.75
NC_018012_2	2.27\|481760\|32\|NC_018012\|CRISPRCasFinder,CRT	481760-481791	32	AP013368	Uncultured Mediterranean phage uvMED DNA, complete genome, group G11, isolate: uvMED-CGR-U-MedDCM-OCT-S25-C42	9398-9429	8	0.75
NC_018012_2	2.28\|481821\|32\|NC_018012\|CRISPRCasFinder,CRT	481821-481852	32	NZ_CP022424	Vitreoscilla filiformis strain ATCC 15551 plasmid pVF1, complete sequence	3678-3709	8	0.75
NC_018012_2	2.29\|481882\|32\|NC_018012\|CRISPRCasFinder,CRT	481882-481913	32	NZ_CP021033	Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence	656264-656295	8	0.75
NC_018012_2	2.30\|481943\|32\|NC_018012\|CRISPRCasFinder,CRT	481943-481974	32	NC_015727	Cupriavidus necator N-1 plasmid pBB1, complete sequence	421203-421234	8	0.75
NC_018012_2	2.32\|482069\|32\|NC_018012\|CRISPRCasFinder,CRT	482069-482100	32	NZ_CP040824	Paraoceanicella profunda strain D4M1 plasmid pD4M1F, complete sequence	55549-55580	8	0.75
NC_018012_2	2.32\|482069\|32\|NC_018012\|CRISPRCasFinder,CRT	482069-482100	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5381633-5381664	8	0.75
NC_018012_2	2.33\|482130\|32\|NC_018012\|CRISPRCasFinder,CRT	482130-482161	32	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	1027615-1027646	8	0.75
NC_018012_2	2.34\|482191\|32\|NC_018012\|CRISPRCasFinder,CRT	482191-482222	32	NZ_CP049734	Rhizobium leguminosarum strain A1 plasmid unnamed1, complete sequence	267029-267060	8	0.75
NC_018012_2	2.34\|482191\|32\|NC_018012\|CRISPRCasFinder,CRT	482191-482222	32	CP049734	Rhizobium leguminosarum strain A1 plasmid pRLa11, complete sequence	55761-55792	8	0.75
NC_018012_2	2.34\|482191\|32\|NC_018012\|CRISPRCasFinder,CRT	482191-482222	32	NZ_CP054024	Rhizobium sp. JKLM12A2 plasmid pPR12A203, complete sequence	269262-269293	8	0.75
NC_018012_2	2.34\|482191\|32\|NC_018012\|CRISPRCasFinder,CRT	482191-482222	32	NZ_CP054035	Rhizobium sp. JKLM13E plasmid pPR13E04, complete sequence	221643-221674	8	0.75
NC_018012_2	2.37\|482374\|32\|NC_018012\|CRISPRCasFinder,CRT	482374-482405	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	448752-448783	8	0.75
NC_018012_2	2.37\|482374\|32\|NC_018012\|CRISPRCasFinder,CRT	482374-482405	32	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	350339-350370	8	0.75
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_CP018001	Rhizobium sp. Y9 plasmid pY9, complete sequence	60966-60997	8	0.75
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	169180-169211	8	0.75
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NC_022536	Rhizobium sp. IRBG74 plasmid IRBL74_p, complete sequence	72963-72994	8	0.75
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	588637-588668	8	0.75
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NC_015184	Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence	142507-142538	8	0.75
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	CP036360	Agrobacterium sp. 33MFTa1.1 plasmid p_JBx_073812, complete sequence	324539-324570	8	0.75
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_CP032923	Agrobacterium tumefaciens strain 1D1108 plasmid pAt1D1108a, complete sequence	50372-50403	8	0.75
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_CP020695	Sulfitobacter sp. D7 plasmid p1SUD7, complete sequence	48731-48762	8	0.75
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_CP043850	Micrococcus luteus strain NCCP 15687 plasmid unnamed, complete sequence	72136-72167	8	0.75
NC_018012_2	2.41\|482618\|32\|NC_018012\|CRISPRCasFinder,CRT	482618-482649	32	NZ_CP015441	Erythrobacter atlanticus strain s21-N3 plasmid unnamed, complete sequence	3393-3424	8	0.75
NC_018012_2	2.41\|482618\|32\|NC_018012\|CRISPRCasFinder,CRT	482618-482649	32	MG925352	Microbacterium phage Nattles, complete genome	27436-27467	8	0.75
NC_018012_2	2.41\|482618\|32\|NC_018012\|CRISPRCasFinder,CRT	482618-482649	32	MG839020	Microbacterium phage Kale, complete genome	27451-27482	8	0.75
NC_018012_2	2.41\|482618\|32\|NC_018012\|CRISPRCasFinder,CRT	482618-482649	32	MG839022	Microbacterium phage Ludgate, complete genome	27747-27778	8	0.75
NC_018012_2	2.41\|482618\|32\|NC_018012\|CRISPRCasFinder,CRT	482618-482649	32	MG962360	Microbacterium phage AlexAdler, complete genome	27742-27773	8	0.75
NC_018012_2	2.43\|482740\|32\|NC_018012\|CRISPRCasFinder,CRT	482740-482771	32	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1958086-1958117	8	0.75
NC_018012_2	2.43\|482740\|32\|NC_018012\|CRISPRCasFinder,CRT	482740-482771	32	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	1128499-1128530	8	0.75
NC_018012_2	2.43\|482740\|32\|NC_018012\|CRISPRCasFinder,CRT	482740-482771	32	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	63694-63725	8	0.75
NC_018012_4	4.9\|1162141\|32\|NC_018012\|CRISPRCasFinder,CRT	1162141-1162172	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	2182207-2182238	8	0.75
NC_018012_4	4.9\|1162141\|32\|NC_018012\|CRISPRCasFinder,CRT	1162141-1162172	32	NZ_CP010410	Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence	239724-239755	8	0.75
NC_018012_4	4.9\|1162141\|32\|NC_018012\|CRISPRCasFinder,CRT	1162141-1162172	32	NC_023609	Mycobacterium phage RhynO, complete genome	22275-22306	8	0.75
NC_018012_4	4.9\|1162141\|32\|NC_018012\|CRISPRCasFinder,CRT	1162141-1162172	32	JN882265	Halorubrum pleomorphic virus 3, complete genome	1864-1895	8	0.75
NC_018012_4	4.13\|1162385\|32\|NC_018012\|CRISPRCasFinder,CRT	1162385-1162416	32	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	518902-518933	8	0.75
NC_018012_4	4.18\|1162690\|32\|NC_018012\|CRISPRCasFinder,CRT	1162690-1162721	32	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	1250042-1250073	8	0.75
NC_018012_4	4.19\|1162751\|32\|NC_018012\|CRISPRCasFinder,CRT	1162751-1162782	32	NC_010627	Paraburkholderia phymatum STM815 plasmid pBPHY02, complete sequence	354267-354298	8	0.75
NC_018012_4	4.27\|1162146\|33\|NC_018012\|PILER-CR	1162146-1162178	33	NZ_CP034185	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence	275555-275587	8	0.758
NC_018012_4	4.27\|1162146\|33\|NC_018012\|PILER-CR	1162146-1162178	33	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	2182206-2182238	8	0.758
NC_018012_4	4.27\|1162146\|33\|NC_018012\|PILER-CR	1162146-1162178	33	NZ_CP010410	Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence	239724-239756	8	0.758
NC_018012_4	4.27\|1162146\|33\|NC_018012\|PILER-CR	1162146-1162178	33	NC_023609	Mycobacterium phage RhynO, complete genome	22275-22307	8	0.758
NC_018012_6	6.1\|1764732\|32\|NC_018012\|CRISPRCasFinder	1764732-1764763	32	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	626227-626258	8	0.75
NC_018012_6	6.1\|1764732\|32\|NC_018012\|CRISPRCasFinder	1764732-1764763	32	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	625776-625807	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NC_023283	Streptomyces sp. FR1 plasmid pFRL3, complete sequence	173699-173730	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NC_023284	Streptomyces sp. F2 plasmid pFRL4, complete sequence	210327-210358	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	131841-131872	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	303497-303528	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	59672-59703	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP017104	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872c, complete sequence	84964-84995	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	1094256-1094287	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	337596-337627	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	1250274-1250305	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	1031814-1031845	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP053207	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence	362263-362294	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	CP006879	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602b, complete sequence	87705-87736	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP036407	Komagataeibacter saccharivorans strain JH1 plasmid p92689, complete sequence	59788-59819	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP035092	Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence	274674-274705	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NC_008688	Paracoccus denitrificans PD1222 plasmid 1, complete sequence	522022-522053	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	162758-162789	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	146243-146274	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	391668-391699	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	42324-42355	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP054622	Azospirillum oryzae strain KACC 14407 plasmid unnamed7, complete sequence	72705-72736	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	69598-69629	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP039651	Azospirillum sp. TSA2s plasmid p1	51782-51813	8	0.75
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	MT024869	Arthrobacter phage Lego, complete genome	25155-25186	8	0.75
NC_018012_15	15.6\|4879519\|35\|NC_018012\|CRT,PILER-CR	4879519-4879553	35	NZ_CP007144	Hymenobacter swuensis DY53 plasmid pHsw1, complete sequence	5272-5306	8	0.771
NC_018012_2	2.2\|480235\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480235-480266	32	NZ_CP019438	Thioclava nitratireducens strain 25B10_4 plasmid unnamed1, complete sequence	149247-149278	9	0.719
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	NZ_CP036456	Streptomonospora sp. M2 plasmid phiM2, complete sequence	68950-68981	9	0.719
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	947587-947618	9	0.719
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	2313225-2313256	9	0.719
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	NC_008703	Mycobacterium sp. KMS plasmid pMKMS01, complete sequence	128346-128377	9	0.719
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MT498062	Microbacterium phage Leafus, complete genome	18827-18858	9	0.719
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MG839030	Microbacterium phage Balsa, complete genome	18689-18720	9	0.719
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MH479922	Microbacterium phage Redfield, complete genome	18688-18719	9	0.719
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MG839024	Microbacterium phage Peppino, complete genome	18680-18711	9	0.719
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	MG839025	Microbacterium phage Raccoon, complete genome	18688-18719	9	0.719
NC_018012_2	2.3\|480296\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480296-480327	32	NC_042110	Microbacterium phage Hamlet, complete genome	18689-18720	9	0.719
NC_018012_2	2.6\|480479\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480479-480510	32	CP027641	Escherichia coli strain 2014C-4705 plasmid unnamed, complete sequence	21960-21991	9	0.719
NC_018012_2	2.6\|480479\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480479-480510	32	CP027674	Escherichia coli strain 2014C-3003 plasmid unnamed2, complete sequence	120205-120236	9	0.719
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP013855	Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence	109878-109909	9	0.719
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP021071	Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence	281601-281632	9	0.719
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	76770-76801	9	0.719
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	237724-237755	9	0.719
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	83202-83233	9	0.719
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	2313-2344	9	0.719
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	810886-810917	9	0.719
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	299664-299695	9	0.719
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1210661-1210692	9	0.719
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP020952	Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence	429850-429881	9	0.719
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP043502	Bacillus paralicheniformis strain A4-3 plasmid unnamed1, complete sequence	12113-12144	9	0.719
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP029834	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence	187087-187118	9	0.719
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	90825-90856	9	0.719
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP046575	Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence	272117-272148	9	0.719
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	KJ410133	Mycobacterium phage Jolie2, complete genome	35060-35091	9	0.719
NC_018012_2	2.13\|480906\|32\|NC_018012\|CRISPRCasFinder,CRT	480906-480937	32	NC_018532	Arthrobacter sp. Rue61a plasmid p232, complete sequence	167333-167364	9	0.719
NC_018012_2	2.14\|480967\|32\|NC_018012\|CRISPRCasFinder,CRT	480967-480998	32	NZ_CP039632	Pseudomonas veronii strain Pvy plasmid unnamed, complete sequence	119578-119609	9	0.719
NC_018012_2	2.14\|480967\|32\|NC_018012\|CRISPRCasFinder,CRT	480967-480998	32	NZ_CP021372	Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence	281703-281734	9	0.719
NC_018012_2	2.14\|480967\|32\|NC_018012\|CRISPRCasFinder,CRT	480967-480998	32	NC_011982	Agrobacterium vitis S4 plasmid pTiS4, complete sequence	227563-227594	9	0.719
NC_018012_2	2.14\|480967\|32\|NC_018012\|CRISPRCasFinder,CRT	480967-480998	32	NZ_KY000075	Agrobacterium vitis strain CFBP2681 plasmid pTi_CFBP2681, complete sequence	187632-187663	9	0.719
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1931843-1931874	9	0.719
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	2024585-2024616	9	0.719
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1828943-1828974	9	0.719
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1901856-1901887	9	0.719
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1827963-1827994	9	0.719
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1930804-1930835	9	0.719
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1930806-1930837	9	0.719
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1828287-1828318	9	0.719
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1828337-1828368	9	0.719
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1828923-1828954	9	0.719
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1932035-1932066	9	0.719
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1932032-1932063	9	0.719
NC_018012_2	2.16\|481089\|32\|NC_018012\|CRISPRCasFinder,CRT	481089-481120	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1931996-1932027	9	0.719
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	NZ_CP024309	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3b, complete sequence	38210-38241	9	0.719
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	177109-177140	9	0.719
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	297248-297279	9	0.719
NC_018012_2	2.25\|481638\|32\|NC_018012\|CRISPRCasFinder,CRT	481638-481669	32	NZ_CP018472	Xanthomonas perforans strain LH3 plasmid pLH3.1, complete sequence	130125-130156	9	0.719
NC_018012_2	2.25\|481638\|32\|NC_018012\|CRISPRCasFinder,CRT	481638-481669	32	NZ_CP018726	Xanthomonas vesicatoria ATCC 35937 strain LMG911 plasmid pLMG911.1, complete sequence	174096-174127	9	0.719
NC_018012_2	2.25\|481638\|32\|NC_018012\|CRISPRCasFinder,CRT	481638-481669	32	NZ_CP018732	Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.1, complete sequence	88645-88676	9	0.719
NC_018012_2	2.29\|481882\|32\|NC_018012\|CRISPRCasFinder,CRT	481882-481913	32	NZ_CP020041	Streptomyces sp. 3211 isolate 3 plasmid p3211-2, complete sequence	75888-75919	9	0.719
NC_018012_2	2.30\|481943\|32\|NC_018012\|CRISPRCasFinder,CRT	481943-481974	32	NC_014811	Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence	104212-104243	9	0.719
NC_018012_2	2.32\|482069\|32\|NC_018012\|CRISPRCasFinder,CRT	482069-482100	32	NC_010851	Streptomyces sp. FR1 plasmid pFRL1, complete sequence	4941-4972	9	0.719
NC_018012_2	2.37\|482374\|32\|NC_018012\|CRISPRCasFinder,CRT	482374-482405	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	325599-325630	9	0.719
NC_018012_2	2.37\|482374\|32\|NC_018012\|CRISPRCasFinder,CRT	482374-482405	32	NZ_LR134451	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence	72859-72890	9	0.719
NC_018012_2	2.37\|482374\|32\|NC_018012\|CRISPRCasFinder,CRT	482374-482405	32	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1362175-1362206	9	0.719
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	306747-306778	9	0.719
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	511083-511114	9	0.719
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	511125-511156	9	0.719
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	511092-511123	9	0.719
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	510885-510916	9	0.719
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	487974-488005	9	0.719
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	KT997829	Uncultured Mediterranean phage uvDeep-CGR0-KM22-C158, complete genome	5930-5961	9	0.719
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1076853-1076884	9	0.719
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	736272-736303	9	0.719
NC_018012_2	2.42\|482679\|32\|NC_018012\|CRISPRCasFinder,CRT	482679-482710	32	NZ_CP044066	Cupriavidus pauculus strain FDAARGOS_664 plasmid unnamed1, complete sequence	51720-51751	9	0.719
NC_018012_2	2.43\|482740\|32\|NC_018012\|CRISPRCasFinder,CRT	482740-482771	32	NZ_CP022371	Bosea sp. AS-1 plasmid unnamed2, complete sequence	90468-90499	9	0.719
NC_018012_4	4.3\|1161775\|32\|NC_018012\|CRISPRCasFinder,CRT	1161775-1161806	32	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	206450-206481	9	0.719
NC_018012_4	4.3\|1161775\|32\|NC_018012\|CRISPRCasFinder,CRT	1161775-1161806	32	NZ_CP035215	Klebsiella michiganensis strain M82255 plasmid pKOCBH-A, complete sequence	256766-256797	9	0.719
NC_018012_4	4.3\|1161775\|32\|NC_018012\|CRISPRCasFinder,CRT	1161775-1161806	32	NZ_CP035216	Klebsiella michiganensis strain M82255 plasmid pKOCBH-B, complete sequence	186352-186383	9	0.719
NC_018012_4	4.3\|1161775\|32\|NC_018012\|CRISPRCasFinder,CRT	1161775-1161806	32	NC_014718	Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence	261800-261831	9	0.719
NC_018012_4	4.3\|1161775\|32\|NC_018012\|CRISPRCasFinder,CRT	1161775-1161806	32	NZ_CP054616	Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence	329222-329253	9	0.719
NC_018012_4	4.3\|1161775\|32\|NC_018012\|CRISPRCasFinder,CRT	1161775-1161806	32	NZ_LN833432	Acinetobacter baumannii isolate CHI-32 plasmid pNDM-32, complete sequence	80185-80216	9	0.719
NC_018012_4	4.7\|1162019\|32\|NC_018012\|CRISPRCasFinder,CRT	1162019-1162050	32	MK415400	Phage apr34_1784, complete genome	10857-10888	9	0.719
NC_018012_4	4.9\|1162141\|32\|NC_018012\|CRISPRCasFinder,CRT	1162141-1162172	32	MK977705	Gordonia Phage Mollymur, complete genome	82462-82493	9	0.719
NC_018012_4	4.13\|1162385\|32\|NC_018012\|CRISPRCasFinder,CRT	1162385-1162416	32	NZ_CP027794	Rhodococcus hoagii strain DSSKP-R-001 plasmid plas1, complete sequence	14743-14774	9	0.719
NC_018012_4	4.15\|1162507\|32\|NC_018012\|CRISPRCasFinder,CRT	1162507-1162538	32	MN850573	Escherichia phage muut, complete genome	128278-128309	9	0.719
NC_018012_4	4.15\|1162507\|32\|NC_018012\|CRISPRCasFinder,CRT	1162507-1162538	32	KU522583	Enterobacteria phage ECGD1, complete genome	93130-93161	9	0.719
NC_018012_4	4.15\|1162507\|32\|NC_018012\|CRISPRCasFinder,CRT	1162507-1162538	32	MN850584	Escherichia phage arall, complete genome	12638-12669	9	0.719
NC_018012_4	4.15\|1162507\|32\|NC_018012\|CRISPRCasFinder,CRT	1162507-1162538	32	MF805809	Escherichia phage vB_EcoM_PHB05, complete genome	84121-84152	9	0.719
NC_018012_4	4.15\|1162507\|32\|NC_018012\|CRISPRCasFinder,CRT	1162507-1162538	32	MH675927	Escherichia phage vB_vPM_PD114, complete genome	85208-85239	9	0.719
NC_018012_4	4.15\|1162507\|32\|NC_018012\|CRISPRCasFinder,CRT	1162507-1162538	32	MH816848	Escherichia phage vB_vPM_PD06, complete genome	65868-65899	9	0.719
NC_018012_4	4.15\|1162507\|32\|NC_018012\|CRISPRCasFinder,CRT	1162507-1162538	32	MN850632	Escherichia phage alia, complete genome	24396-24427	9	0.719
NC_018012_4	4.31\|1162390\|33\|NC_018012\|PILER-CR	1162390-1162422	33	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	518901-518933	9	0.727
NC_018012_6	6.1\|1764732\|32\|NC_018012\|CRISPRCasFinder	1764732-1764763	32	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1231358-1231389	9	0.719
NC_018012_6	6.1\|1764732\|32\|NC_018012\|CRISPRCasFinder	1764732-1764763	32	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	413054-413085	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1328980-1329011	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	5600-5631	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	948170-948201	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	705510-705541	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1066794-1066825	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	153013-153044	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	158341-158372	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NC_006571	Streptomyces albulus plasmid pNO33 DNA, complete sequence	19213-19244	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	153006-153037	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1379795-1379826	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	168826-168857	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	87034-87065	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP050094	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b4, complete sequence	273933-273964	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP050106	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence	186176-186207	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP021360	Acidovorax carolinensis strain NA2 plasmid pACNA2.1, complete sequence	36535-36566	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1928253-1928284	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NC_011371	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG204, complete sequence	247327-247358	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP021367	Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence	41612-41643	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP050111	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence	186360-186391	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP030763	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence	649356-649387	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP021363	Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence	27663-27694	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	906524-906555	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	725999-726030	9	0.719
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP050088	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence	310573-310604	9	0.719
NC_018012_15	15.6\|4879519\|35\|NC_018012\|CRT,PILER-CR	4879519-4879553	35	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	365367-365401	9	0.743
NC_018012_16	16.8\|4881558\|35\|NC_018012\|CRT,PILER-CR,CRISPRCasFinder	4881558-4881592	35	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	506933-506967	9	0.743
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	691533-691564	10	0.688
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	816522-816553	10	0.688
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP022417	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-2, complete sequence	134567-134598	10	0.688
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	CP054924	Verrucosispora sp. NA02020 plasmid unnamed, complete sequence	56549-56580	10	0.688
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP040249	Mycobacterium avium subsp. hominissuis strain 101174 plasmid pMARIA, complete sequence	13782-13813	10	0.688
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	1320642-1320673	10	0.688
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	51326-51357	10	0.688
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP005085	Sphingobium sp. TKS plasmid pTK1, complete sequence	400308-400339	10	0.688
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	KY092484	Streptomyces phage Raleigh, complete genome	5525-5556	10	0.688
NC_018012_2	2.9\|480662\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480662-480693	32	NZ_LN890657	Candidatus Promineofilum breve strain Cfx-K plasmid III, complete sequence	17521-17552	10	0.688
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	921598-921629	10	0.688
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	1943733-1943764	10	0.688
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	766349-766380	10	0.688
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	MN204493	Streptomyces phage Zuko, complete genome	30250-30281	10	0.688
NC_018012_2	2.19\|481272\|32\|NC_018012\|CRISPRCasFinder,CRT	481272-481303	32	NZ_CP041766	Tomitella sp. HY188 plasmid unnamed, complete sequence	36366-36397	10	0.688
NC_018012_2	2.24\|481577\|32\|NC_018012\|CRISPRCasFinder,CRT	481577-481608	32	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	1110806-1110837	10	0.688
NC_018012_2	2.25\|481638\|32\|NC_018012\|CRISPRCasFinder,CRT	481638-481669	32	MT536174	Stenotrophomonas phage vB_SmaS-AXL_3, complete genome	1133-1164	10	0.688
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	608592-608623	10	0.688
NC_018012_2	2.38\|482435\|32\|NC_018012\|CRISPRCasFinder,CRT	482435-482466	32	NC_022087	Mycobacterium phage AnnaL29, complete genome	8225-8256	10	0.688
NC_018012_2	2.42\|482679\|32\|NC_018012\|CRISPRCasFinder,CRT	482679-482710	32	NZ_CP049245	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed4, complete sequence	208551-208582	10	0.688
NC_018012_2	2.42\|482679\|32\|NC_018012\|CRISPRCasFinder,CRT	482679-482710	32	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	315365-315396	10	0.688
NC_018012_2	2.42\|482679\|32\|NC_018012\|CRISPRCasFinder,CRT	482679-482710	32	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	113599-113630	10	0.688
NC_018012_2	2.43\|482740\|32\|NC_018012\|CRISPRCasFinder,CRT	482740-482771	32	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	615702-615733	10	0.688
NC_018012_2	2.43\|482740\|32\|NC_018012\|CRISPRCasFinder,CRT	482740-482771	32	CP000619	Burkholderia vietnamiensis G4 plasmid pBVIE03, complete sequence	209901-209932	10	0.688
NC_018012_2	2.43\|482740\|32\|NC_018012\|CRISPRCasFinder,CRT	482740-482771	32	NZ_CP012698	Microbacterium sp. No. 7 plasmid A, complete sequence	128551-128582	10	0.688
NC_018012_2	2.44\|482801\|32\|NC_018012\|CRISPRCasFinder,CRT	482801-482832	32	NC_015727	Cupriavidus necator N-1 plasmid pBB1, complete sequence	95315-95346	10	0.688
NC_018012_2	2.44\|482801\|32\|NC_018012\|CRISPRCasFinder,CRT	482801-482832	32	NC_015727	Cupriavidus necator N-1 plasmid pBB1, complete sequence	98933-98964	10	0.688
NC_018012_2	2.44\|482801\|32\|NC_018012\|CRISPRCasFinder,CRT	482801-482832	32	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	199753-199784	10	0.688
NC_018012_2	2.44\|482801\|32\|NC_018012\|CRISPRCasFinder,CRT	482801-482832	32	NZ_CP024940	Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence	311664-311695	10	0.688
NC_018012_4	4.3\|1161775\|32\|NC_018012\|CRISPRCasFinder,CRT	1161775-1161806	32	NZ_CP042264	Litoreibacter sp. LN3S51 plasmid unnamed3, complete sequence	159322-159353	10	0.688
NC_018012_4	4.4\|1161836\|32\|NC_018012\|CRISPRCasFinder,CRT	1161836-1161867	32	NZ_CP015065	Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence	151660-151691	10	0.688
NC_018012_4	4.4\|1161836\|32\|NC_018012\|CRISPRCasFinder,CRT	1161836-1161867	32	NZ_CP013053	Sinorhizobium americanum CCGM7 plasmid B, complete sequence	311703-311734	10	0.688
NC_018012_4	4.6\|1161958\|32\|NC_018012\|CRISPRCasFinder,CRT	1161958-1161989	32	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	541301-541332	10	0.688
NC_018012_4	4.6\|1161958\|32\|NC_018012\|CRISPRCasFinder,CRT	1161958-1161989	32	NZ_CP022304	Thalassococcus sp. S3 plasmid pS3A, complete sequence	18289-18320	10	0.688
NC_018012_4	4.9\|1162141\|32\|NC_018012\|CRISPRCasFinder,CRT	1162141-1162172	32	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	498513-498544	10	0.688
NC_018012_4	4.9\|1162141\|32\|NC_018012\|CRISPRCasFinder,CRT	1162141-1162172	32	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	138450-138481	10	0.688
NC_018012_4	4.13\|1162385\|32\|NC_018012\|CRISPRCasFinder,CRT	1162385-1162416	32	NZ_CP042264	Litoreibacter sp. LN3S51 plasmid unnamed3, complete sequence	20391-20422	10	0.688
NC_018012_4	4.15\|1162507\|32\|NC_018012\|CRISPRCasFinder,CRT	1162507-1162538	32	NZ_CP013345	Sphingopyxis macrogoltabida strain 203N plasmid unnamed1, complete sequence	214678-214709	10	0.688
NC_018012_4	4.18\|1162690\|32\|NC_018012\|CRISPRCasFinder,CRT	1162690-1162721	32	NZ_CP039697	Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence	99322-99353	10	0.688
NC_018012_4	4.18\|1162690\|32\|NC_018012\|CRISPRCasFinder,CRT	1162690-1162721	32	NZ_CP030828	Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence	181570-181601	10	0.688
NC_018012_4	4.19\|1162751\|32\|NC_018012\|CRISPRCasFinder,CRT	1162751-1162782	32	NC_023283	Streptomyces sp. FR1 plasmid pFRL3, complete sequence	224711-224742	10	0.688
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP053207	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence	649216-649247	10	0.688
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP050083	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence	630945-630976	10	0.688
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP050100	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b3, complete sequence	284351-284382	10	0.688
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	CP054930	Streptomyces sp. NA00687 plasmid unnamed, complete sequence	7514-7545	10	0.688
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP045329	Labrenzia sp. THAF191b plasmid pTHAF191b_a, complete sequence	74188-74219	10	0.688
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP025017	Rhizobium leguminosarum strain Norway plasmid pRLN5, complete sequence	274244-274275	10	0.688
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP049733	Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence	618658-618689	10	0.688
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP045345	Labrenzia sp. THAF187b plasmid pTHAF187b_a, complete sequence	331402-331433	10	0.688
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP045335	Labrenzia sp. THAF191a plasmid pTHAF191a_b, complete sequence	365952-365983	10	0.688
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP053443	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eC, complete sequence	249892-249923	10	0.688
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP018232	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed4, complete sequence	33222-33253	10	0.688
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP016291	Rhizobium leguminosarum strain Vaf10 plasmid unnamed6, complete sequence	129740-129771	10	0.688
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP048284	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence	275336-275367	10	0.688
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP041042	Paracoccus sp. AK26 plasmid pAK4, complete sequence	26068-26099	10	0.688
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	NZ_CP041044	Paracoccus sp. AK26 plasmid pAK2, complete sequence	23246-23277	10	0.688
NC_018012_14	14.1\|4773515\|32\|NC_018012\|CRISPRCasFinder	4773515-4773546	32	KT281795	Mycobacterium phage XFactor, complete genome	45389-45420	10	0.688
NC_018012_15	15.6\|4879519\|35\|NC_018012\|CRT,PILER-CR	4879519-4879553	35	NZ_CP010408	Streptomyces vietnamensis strain GIMV4.0001 plasmid pSVL1, complete sequence	204817-204851	10	0.714
NC_018012_16	16.8\|4881558\|35\|NC_018012\|CRT,PILER-CR,CRISPRCasFinder	4881558-4881592	35	NC_023285	Streptomyces sp. F8 plasmid pFRL5, complete sequence	262579-262613	10	0.714
NC_018012_16	16.8\|4881558\|35\|NC_018012\|CRT,PILER-CR,CRISPRCasFinder	4881558-4881592	35	MH271305	Gordonia phage Morrissey, complete genome	42804-42838	10	0.714
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP040253	Mycobacterium avium subsp. hominissuis strain 101115 plasmid pMARIA, complete sequence	3859-3890	11	0.656
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	NZ_CP040245	Mycobacterium avium subsp. hominissuis strain 101034 plasmid pMARIA, complete sequence	17755-17786	11	0.656
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MN234186	Arthrobacter phage Egad, complete genome	33269-33300	11	0.656
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MN234180	Arthrobacter phage Shiba, complete genome	32965-32996	11	0.656
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MN234229	Arthrobacter phage StarLord, complete genome	33268-33299	11	0.656
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MN234175	Arthrobacter phage Stayer, complete genome	33265-33296	11	0.656
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MN234202	Arthrobacter phage Salk, complete genome	33265-33296	11	0.656
NC_018012_2	2.7\|480540\|32\|NC_018012\|PILER-CR,CRISPRCasFinder,CRT	480540-480571	32	MN234210	Arthrobacter phage Michelle, complete genome	33267-33298	11	0.656
NC_018012_2	2.17\|481150\|32\|NC_018012\|CRISPRCasFinder,CRT	481150-481181	32	CP007644	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence	451977-452008	11	0.656
NC_018012_4	4.21\|1161780\|33\|NC_018012\|PILER-CR	1161780-1161812	33	NZ_CP042264	Litoreibacter sp. LN3S51 plasmid unnamed3, complete sequence	159322-159354	11	0.667

1. spacer 10.1|2830426|19|NC_018012|CRISPRCasFinder matches to NZ_CP025805 (Sulfitobacter sp. SK012 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gctcttccttggaggtctc	CRISPR spacer
gctcttccttggaggtctc	Protospacer
*******************

2. spacer 10.2|2830468|19|NC_018012|CRISPRCasFinder matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 0, identity: 1.0

gttcctcgttgaccgattg	CRISPR spacer
gttcctcgttgaccgattg	Protospacer
*******************

3. spacer 10.2|2830468|19|NC_018012|CRISPRCasFinder matches to NZ_CP040759 (Paracoccus sp. 2251 plasmid unnamed8, complete sequence) position: , mismatch: 0, identity: 1.0

gttcctcgttgaccgattg	CRISPR spacer
gttcctcgttgaccgattg	Protospacer
*******************

4. spacer 10.2|2830468|19|NC_018012|CRISPRCasFinder matches to NZ_CP054022 (Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence) position: , mismatch: 0, identity: 1.0

gttcctcgttgaccgattg	CRISPR spacer
gttcctcgttgaccgattg	Protospacer
*******************

5. spacer 10.2|2830468|19|NC_018012|CRISPRCasFinder matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 0, identity: 1.0

gttcctcgttgaccgattg	CRISPR spacer
gttcctcgttgaccgattg	Protospacer
*******************

6. spacer 2.42|482679|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 4, identity: 0.875

accccgc-gaccggcgaaacccacatggccctc	CRISPR spacer
-ccctgctgaccggcgaatccgacatggccctc	Protospacer
 ***.** ********** ** ***********

7. spacer 2.42|482679|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 4, identity: 0.875

accccgc-gaccggcgaaacccacatggccctc	CRISPR spacer
-ccctgctgaccggcgaatccgacatggccctc	Protospacer
 ***.** ********** ** ***********

8. spacer 2.42|482679|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 4, identity: 0.875

accccgc-gaccggcgaaacccacatggccctc	CRISPR spacer
-ccctgctgaccggcgaatccgacatggccctc	Protospacer
 ***.** ********** ** ***********

9. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134470 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 28, complete sequence) position: , mismatch: 5, identity: 0.844

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
cgcggacgacgccgtcgacgcgatcatcgcgg	Protospacer
*   *****.**************** *****

10. spacer 2.29|481882|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-gcgcgcgggtgcatgctgctgctggtcgagat	CRISPR spacer
agcgc-cgtgtgcatgctgctgctgatcgcgct	Protospacer
 **** ** ****************.*** * *

11. spacer 2.29|481882|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-gcgcgcgggtgcatgctgctgctggtcgagat	CRISPR spacer
agcgc-cgtgtgcatgctgctgctgatcgggct	Protospacer
 **** ** ****************.***.* *

12. spacer 2.29|481882|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-gcgcgcgggtgcatgctgctgctggtcgagat	CRISPR spacer
agcgc-cgtgtgcatgctgctgctgatcgggct	Protospacer
 **** ** ****************.***.* *

13. spacer 2.29|481882|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-gcgcgcgggtgcatgctgctgctggtcgagat	CRISPR spacer
agcgc-cgtgtgcatgctgctgctgatcgcgct	Protospacer
 **** ** ****************.*** * *

14. spacer 2.29|481882|32|NC_018012|CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 5, identity: 0.844

-gcgcgcgggtgcatgctgctgctggtcgagat	CRISPR spacer
agcgc-cgtgtgcatgctgctgctgatcgggct	Protospacer
 **** ** ****************.***.* *

15. spacer 2.29|481882|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-gcgcgcgggtgcatgctgctgctggtcgagat	CRISPR spacer
agcgc-cgtgtgcatgctgctgctgatcgggct	Protospacer
 **** ** ****************.***.* *

16. spacer 2.29|481882|32|NC_018012|CRISPRCasFinder,CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-gcgcgcgggtgcatgctgctgctggtcgagat	CRISPR spacer
agcgc-cgtgtgcatgctgctgctgatcgcgct	Protospacer
 **** ** ****************.*** * *

17. spacer 2.29|481882|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 5, identity: 0.844

-gcgcgcgggtgcatgctgctgctggtcgagat	CRISPR spacer
agcgc-cgtgtgcatgctgctgctgatcgggct	Protospacer
 **** ** ****************.***.* *

18. spacer 2.29|481882|32|NC_018012|CRISPRCasFinder,CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-gcgcgcgggtgcatgctgctgctggtcgagat	CRISPR spacer
agcgc-cgtgtgcatgctgctgctgatcgcgct	Protospacer
 **** ** ****************.*** * *

19. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP010421 (Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence) position: , mismatch: 5, identity: 0.844

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
gcccgcaggtcttcggctgcctgtgcggcctg	Protospacer
***************** ****** *** .*

20. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.812

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
atatcttgatgccgtcgacgcgatcgacgctg	Protospacer
 ***  .******************.**** *

21. spacer 2.14|480967|32|NC_018012|CRISPRCasFinder,CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 6, identity: 0.812

tgaccgccgaaaaggaagacgcg--cgcatgacc	CRISPR spacer
tgaccggcgagaaggaagacgcggtcgaataa--	Protospacer
****** ***.************  ** **.*

22. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.812

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
gcgcccgccttgaccgcctcgaggacgtcgtc	Protospacer
*.*** ***************** *****.

23. spacer 2.25|481638|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_AP014706 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence) position: , mismatch: 6, identity: 0.812

cggatgccaggcttcttcatcaagcggacgct	CRISPR spacer
ctgcagcctggcttcttcctcaagcggacggt	Protospacer
* *  *** ********* *********** *

24. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 6, identity: 0.812

accgaagccagcaccgaggagat-ggcccgctt	CRISPR spacer
gccgacgccatcaccgaggagatgggcgcgcc-	Protospacer
.**** **** ************ *** ***.

25. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.812

accgaagccagcaccgaggagat-ggcccgctt	CRISPR spacer
gccgacgccatcaccgaggagatgggcgcgcc-	Protospacer
.**** **** ************ *** ***.

26. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.812

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
atcgccgccatcgccgaggagatggcccgcgt	Protospacer
*.**  **** *.***************** *

27. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.812

accgaagccagcaccgaggagat-ggcccgctt	CRISPR spacer
gccgacgccatcaccgaggagatgggcgcgcc-	Protospacer
.**** **** ************ *** ***.

28. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 6, identity: 0.812

accgaagccagcaccgaggagat-ggcccgctt	CRISPR spacer
gccgacgccatcaccgaggagatgggcgcgcc-	Protospacer
.**** **** ************ *** ***.

29. spacer 4.7|1162019|32|NC_018012|CRISPRCasFinder,CRT matches to KR093634 (Moraxella phage Mcat10, complete genome) position: , mismatch: 6, identity: 0.812

gttttgtctgcgttgtctacgtttttaagacg-	CRISPR spacer
gttttgtctgcattgtctgcg-ttttaagctat	Protospacer
***********.******.** ******* ..

30. spacer 4.7|1162019|32|NC_018012|CRISPRCasFinder,CRT matches to KR093635 (Moraxella phage Mcat11, complete genome) position: , mismatch: 6, identity: 0.812

gttttgtctgcgttgtctacgtttttaagacg-	CRISPR spacer
gttttgtctgcattgtctgcg-ttttaagctat	Protospacer
***********.******.** ******* ..

31. spacer 6.1|1764732|32|NC_018012|CRISPRCasFinder matches to NZ_CP005085 (Sphingobium sp. TKS plasmid pTK1, complete sequence) position: , mismatch: 6, identity: 0.812

ccgaccaggccatgtatcaggccaagctatcc	CRISPR spacer
ccgaccaggccatgtatcgcgccaagcgcggc	Protospacer
******************. *******    *

32. spacer 6.1|1764732|32|NC_018012|CRISPRCasFinder matches to NZ_CP042999 (Aquisphaera giovannonii strain OJF2 plasmid pOJF2_2, complete sequence) position: , mismatch: 6, identity: 0.812

ccgaccaggccatgtatcaggccaagctatcc	CRISPR spacer
ccgaccaggccatgtaccgggccaagcgcggc	Protospacer
****************.*.********    *

33. spacer 6.1|1764732|32|NC_018012|CRISPRCasFinder matches to NZ_CP049319 (Caballeronia sp. SBC2 plasmid pSBC2-3, complete sequence) position: , mismatch: 6, identity: 0.812

ccgaccaggccatgtatcaggcc--aagctatcc	CRISPR spacer
ccgaccacgcgatgtatcaggccaaaagccgt--	Protospacer
******* ** ************  ****..*

34. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.812

-gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
tggccg-agttcttcggcgggctgttcgggcac	Protospacer
 * *** ** ********** *********. *

35. spacer 2.2|480235|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN734439 (Sphingomonas phage Kharn, complete genome) position: , mismatch: 7, identity: 0.781

tgacggcgacgggcggggcgattgggcctgct	CRISPR spacer
tgacggcgacgggcgcggcggttgcagcggcg	Protospacer
*************** ****.*** . * **

36. spacer 2.2|480235|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN734438 (Sphingomonas phage Lucius, complete genome) position: , mismatch: 7, identity: 0.781

tgacggcgacgggcggggcgattgggcctgct	CRISPR spacer
tgacggcgacgggcgcggcggttgcagcggcg	Protospacer
*************** ****.*** . * **

37. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MT451985 (Microbacterium phage Dothraki, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

38. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MT771350 (Microbacterium phage TatarkaPM, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

39. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN062709 (Microbacterium phage Stanktossa, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

40. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MT310866 (Microbacterium phage Pherferi, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

41. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MH153802 (Microbacterium phage Gargoyle, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

42. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MT553343 (Microbacterium Phage ParleG, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

43. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MH153805 (Microbacterium phage Martin, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

44. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MT553341 (Microbacterium phage Kurt1, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

45. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MH513981 (Microbacterium phage Papafritta, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

46. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MK620902 (Microbacterium phage Phriends, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

47. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MG920061 (Microbacterium phage Bonino, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

48. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MK620905 (Microbacterium phage TinSulphur, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

49. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MT553339 (Microbacterium phage Lovelyunicorn, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

50. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MG944222 (Microbacterium phage StingRay, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

51. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MT310861 (Microbacterium phage BeautPeep30, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

52. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MK919471 (Microbacterium phage Shee, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

53. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MT024864 (Microbacterium phage Oxtober96, complete genome) position: , mismatch: 7, identity: 0.781

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gcatgacgatgacgtcgacgcgttcacccagg	Protospacer
 .********* ********** *** *  **

54. spacer 2.6|480479|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045548 (Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

-gctatcagtggatgggcgccggcggcaatgtt	CRISPR spacer
tgct-tcaggggctgggcgccggcggcatgggc	Protospacer
 *** **** ** ***************  * .

55. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.781

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
gcctgggcaacggcgaggtcgccggccgcctg	Protospacer
**  ***** **************.**.  **

56. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046574 (Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence) position: , mismatch: 7, identity: 0.781

gcaagggcaccggcgaggtcgccgaccagatg--	CRISPR spacer
cccagggcctcggcgaggtcgccgac--ggtgat	Protospacer
 * ***** .****************  *.**

57. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.781

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
gcctgggcaacggcgaggtcgccggccgcctg	Protospacer
**  ***** **************.**.  **

58. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.781

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
gcctgggcaacggcgaggtcgccggccgcctg	Protospacer
**  ***** **************.**.  **

59. spacer 2.10|480723|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015231 (Epibacterium mobile F1926 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

tgacctgcatgattttcccgtcaaagcgcatc	CRISPR spacer
tgtcaggcatgattttcgcggcaaagcgctgc	Protospacer
** *  *********** ** ********  *

60. spacer 2.11|480784|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcgccggattcgggcgcgtgcgtcgatg	CRISPR spacer
aatggcgccggagtcgggcgcgtgcgtcatcg	Protospacer
. .********* ***************. .*

61. spacer 2.11|480784|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcgccggattcgggcgcgtgcgtcgatg	CRISPR spacer
aatggcgccggagtcgggcgcgtgcgtcatcg	Protospacer
. .********* ***************. .*

62. spacer 2.14|480967|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP030914 (Pseudomonas aeruginosa strain Y89 plasmid pY89, complete sequence) position: , mismatch: 7, identity: 0.781

tgaccgccgaaaaggaagacgcgcgcatgacc	CRISPR spacer
gcggcgaggaaaaggaagacgcgcgcctgacc	Protospacer
  . **  ****************** *****

63. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to NC_020275 (Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
atgaatcccttgaccgcctcgcgcaggtcagg	Protospacer
.**    ************** *** ******

64. spacer 2.25|481638|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_AP014706 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence) position: , mismatch: 7, identity: 0.781

cggatgccaggcttcttcatcaagcggacgct	CRISPR spacer
ctgcagccaggcctcttcttcaagcggacgga	Protospacer
* *  *******.***** ***********

65. spacer 2.32|482069|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

---ccggattgatggacgtggccaccgtcgcggcg	CRISPR spacer
gcgccgg---cgtggacgtggccgccgccgcggcg	Protospacer
   ****    .***********.***.*******

66. spacer 2.32|482069|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

ccggattgatggacgtggccaccgtcgcggcg	CRISPR spacer
ccttgttgatggtcgtggcccccgtcgcatcg	Protospacer
**  .******* ******* *******. **

67. spacer 2.34|482191|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP020950 (Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence) position: , mismatch: 7, identity: 0.781

aacgagggtgcttacccggatcgcattctgat	CRISPR spacer
ttcaaggctgcttacccgcatcgcattctcag	Protospacer
  *.*** ********** ********** *

68. spacer 2.37|482374|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP024714 (Pseudomonas syringae pv. actinidiae strain MAFF212063 plasmid pMAFF212063-B, complete sequence) position: , mismatch: 7, identity: 0.781

gccggggatcgccgcgcaggcgtcgcgaatcg	CRISPR spacer
accggtgatcgccgcgcaggcctcttgcaacg	Protospacer
.**** *************** ** .* * **

69. spacer 2.37|482374|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP041755 (Pseudomonas sp. KBS0707 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gccggggatcgccgcgcaggcgtcgcgaatcg	CRISPR spacer
accggtgatcgccgcgcaggcctcttgcaacg	Protospacer
.**** *************** ** .* * **

70. spacer 2.37|482374|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 7, identity: 0.781

gccggggatcgccgcgcaggcgt--cgcgaatcg	CRISPR spacer
gccgcggatcgccgcgaaggcgtacggcgagc--	Protospacer
**** *********** ******   ****..

71. spacer 2.37|482374|32|NC_018012|CRISPRCasFinder,CRT matches to NC_007274 (Pseudomonas savastanoi pv. phaseolicola 1448A plasmid large, complete sequence) position: , mismatch: 7, identity: 0.781

gccggggatcgccgcgcaggcgtcgcgaatcg	CRISPR spacer
accggtgatcgccgcgcaggcctcttgcaacg	Protospacer
.**** *************** ** .* * **

72. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.781

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
accgaagcgatcaccgaggagatggtgtcctg	Protospacer
******** * **************. . **

73. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 7, identity: 0.781

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
ggcgccgccagcaccgaggacgtggcccgcat	Protospacer
. **  ************** .******** *

74. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022999 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence) position: , mismatch: 7, identity: 0.781

accga-agccagcaccgaggagatggcccgctt	CRISPR spacer
-ctgattgcccgcaccgaggagatcgcccgcgg	Protospacer
 *.**  *** ************* ******

75. spacer 2.43|482740|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

ttgtctgccgccgtgagcgcggcggcaatctc	CRISPR spacer
ttgccgatcgccgcgagcgcggcggcattctg	Protospacer
***.* ..*****.************* ***

76. spacer 2.44|482801|32|NC_018012|CRISPRCasFinder,CRT matches to MN657140 (Cryobacterium sp. strain ANT_H26B plasmid pA26BH1, complete sequence) position: , mismatch: 7, identity: 0.781

gaacgacgccgaagaggtgcaccgcgaacatc	CRISPR spacer
gttgcacgccgacgaggtgcgccgcgaacagc	Protospacer
*    ******* *******.********* *

77. spacer 2.44|482801|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

gaacgacgccgaagaggtgcaccgcgaacatc	CRISPR spacer
caacgccgccgaacaggtgcaccgcgtccgta	Protospacer
 **** ******* ************  *.*

78. spacer 4.3|1161775|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.781

gtccaggtcggcactcatcgtgacggtgccga	CRISPR spacer
gcccaggtcggcactgatcgagacgccgggga	Protospacer
*.************* **** **** .*  **

79. spacer 4.9|1162141|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP034185 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

tatacggccgctcccgagccggtcaaggtggc	CRISPR spacer
gcgacagccgctcccgagccgctcaaggtgca	Protospacer
   **.*************** ********

80. spacer 4.25|1162024|33|NC_018012|PILER-CR matches to KR093634 (Moraxella phage Mcat10, complete genome) position: , mismatch: 7, identity: 0.788

gttttgtctgcgttgtctacgtttttaagacgg-	CRISPR spacer
gttttgtctgcattgtctgcg-ttttaagctatc	Protospacer
***********.******.** ******* ..

81. spacer 4.25|1162024|33|NC_018012|PILER-CR matches to KR093635 (Moraxella phage Mcat11, complete genome) position: , mismatch: 7, identity: 0.788

gttttgtctgcgttgtctacgtttttaagacgg-	CRISPR spacer
gttttgtctgcattgtctgcg-ttttaagctatc	Protospacer
***********.******.** ******* ..

82. spacer 6.1|1764732|32|NC_018012|CRISPRCasFinder matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 7, identity: 0.781

ccgaccaggccatgtatcaggccaagctatcc	CRISPR spacer
ccgaccaggcgctgtatcaggccaagcagggg	Protospacer
**********  *************** .

83. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_LR594668 (Variovorax sp. SRS16 plasmid 3) position: , mismatch: 7, identity: 0.781

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
acccgcaggtcttcggcggtcagttcgaccgc	Protospacer
.******************.* *****. . *

84. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 7, identity: 0.781

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cgtcccaggtctgcggcggcttgttcgggttg	Protospacer
  .* ******* *******.**********

85. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NC_011892 (Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete sequence) position: , mismatch: 7, identity: 0.781

gcccgcaggtcttcggcggcctgttcgggttc---	CRISPR spacer
gcccgaaggtcgtcggcggcctgcccg---tcgag	Protospacer
***** ***** ***********..**   **

86. spacer 15.6|4879519|35|NC_018012|CRT,PILER-CR matches to KT591491 (Mycobacterium phage Bricole, complete genome) position: , mismatch: 7, identity: 0.8

tgcggtgac-cttggcgatgttgccggtcagtgcgc	CRISPR spacer
-ccggtcgcgcttggcggtgttgccgatcagtgcgt	Protospacer
  **** .* *******.********.********.

87. spacer 15.6|4879519|35|NC_018012|CRT,PILER-CR matches to NC_021299 (Mycobacterium phage PegLeg, complete genome) position: , mismatch: 7, identity: 0.8

tgcggtgac-cttggcgatgttgccggtcagtgcgc	CRISPR spacer
-ccggtcgcgcttggcggtgttgccgatcagtgcgt	Protospacer
  **** .* *******.********.********.

88. spacer 15.6|4879519|35|NC_018012|CRT,PILER-CR matches to MN586024 (Mycobacterium phage TyDawg, complete genome) position: , mismatch: 7, identity: 0.8

tgcggtgac-cttggcgatgttgccggtcagtgcgc	CRISPR spacer
-ccggtcgcgcttggcggtgttgccgatcagtgcgt	Protospacer
  **** .* *******.********.********.

89. spacer 15.6|4879519|35|NC_018012|CRT,PILER-CR matches to MK937612 (Mycobacterium phage LilhomieP, complete genome) position: , mismatch: 7, identity: 0.8

tgcggtgac-cttggcgatgttgccggtcagtgcgc	CRISPR spacer
-ccggtcgcgcttggcggtgttgccgatcagtgcgt	Protospacer
  **** .* *******.********.********.

90. spacer 15.6|4879519|35|NC_018012|CRT,PILER-CR matches to MH697587 (Mycobacterium phage IPhane7, complete genome) position: , mismatch: 7, identity: 0.8

tgcggtgac-cttggcgatgttgccggtcagtgcgc	CRISPR spacer
-ccggtcgcgcttggcggtgttgccgatcagtgcgt	Protospacer
  **** .* *******.********.********.

91. spacer 15.6|4879519|35|NC_018012|CRT,PILER-CR matches to NC_041970 (Mycobacterium phage Bongo, complete genome) position: , mismatch: 7, identity: 0.8

tgcggtgac-cttggcgatgttgccggtcagtgcgc	CRISPR spacer
-ccggtcgcgcttggcggtgttgccgatcagtgcgt	Protospacer
  **** .* *******.********.********.

92. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU254577 (Pseudomonas aeruginosa strain HN39 plasmid pHN39-SIM, complete sequence) position: , mismatch: 8, identity: 0.75

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gttcaaagctgccatcgacgcgatcaacccgg	Protospacer
 * ..* * ****.************** ***

93. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to CP031732 (Stenotrophomonas rhizophila strain GA1 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gttcaaagctgccatcgacgcgatcaacccgg	Protospacer
 * ..* * ****.************** ***

94. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP015031 (Pseudomonas putida strain KF715 plasmid pKF715B, complete sequence) position: , mismatch: 8, identity: 0.75

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
tttcaaagctgccatcgacgcgatcaacccgg	Protospacer
.* ..* * ****.************** ***

95. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 8, identity: 0.75

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
gattgatcgtgcggtcgacgcgatcgacgcgg	Protospacer
   ***. .*** ************.******

96. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to KJ028219 (Mycobacterium phage 32HC, complete genome) position: , mismatch: 8, identity: 0.75

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
caacccggataccgtcgacgcgctcaacgccg	Protospacer
* *.   ***.*********** ******* *

97. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
ccgggttcaccggcgacttcgccgaccagatc	Protospacer
 *..*  *********  *************

98. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MF373843 (Mycobacterium phage StevieRay, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

99. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MT024866 (Mycobacterium phage Willsammy, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

100. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN892486 (Mycobacterium phage KilKor, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
ccgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

101. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MK814758 (Mycobacterium phage FirstPlacePfu, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

102. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MK494122 (Mycobacterium phage GreaseLightnin, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

103. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN010757 (Mycobacterium phage HUHilltop, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

104. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN908683 (Mycobacterium phage StressBall, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
ccgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

105. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MK524508 (Mycobacterium phage Zilizebeth, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

106. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN096356 (Mycobacterium phage Bunnies, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

107. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MK820639 (Mycobacterium phage Phineas, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

108. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN892484 (Mycobacterium phage CactusJack, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
ccgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

109. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MT498061 (Mycobacterium phage Jung, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
ccgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

110. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MF133446 (Mycobacterium phage Bogie, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

111. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to KT347313 (Mycobacterium phage Brusacoram, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

112. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MF140399 (Mycobacterium phage Bartholomew, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

113. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MH230879 (Mycobacterium phage Xavia, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

114. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN807249 (Mycobacterium phage Megiddo, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
ccgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

115. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MK937604 (Mycobacterium phage Necropolis, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

116. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NC_041969 (Mycobacterium phage Jebeks, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

117. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to KC691256 (Mycobacterium phage Fishburne, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

118. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN807250 (Mycobacterium phage Glaske, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
ccgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

119. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MF281061 (Mycobacterium phage Ksquared, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

120. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to KU985090 (Mycobacterium phage Shipwreck, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
ccgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

121. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN585977 (Mycobacterium phage Atcoo, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

122. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MG198785 (Mycobacterium phage Thespis, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

123. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN807248 (Mycobacterium phage Phalm, complete genome) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
ccgaggacaccggcgaggtcaccgacctcaca	Protospacer
 *.***.*************.******  *..

124. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053441 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
atatgagcaacggcgaggtcgccggccagccg	Protospacer
..* *.*** **************.**** .*

125. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
gcctgggcacccgcgaggtcgccggcctccag	Protospacer
**  ******* ************.**    *

126. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041653 (Streptomyces sp. RLB1-9 plasmid pRLB1-9.1, complete sequence) position: , mismatch: 8, identity: 0.75

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgcgggcaccgacgaggtctccgacctgttc	Protospacer
 *. ********.******* ****** * *

127. spacer 2.10|480723|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049734 (Rhizobium leguminosarum strain A1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

-tgacctgcatgattttcccgtcaaagcgcatc	CRISPR spacer
accacgt-catgattttcctgtcatagcgcacg	Protospacer
 . ** * ***********.**** ******.

128. spacer 2.10|480723|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to CP049734 (Rhizobium leguminosarum strain A1 plasmid pRLa11, complete sequence) position: , mismatch: 8, identity: 0.75

-tgacctgcatgattttcccgtcaaagcgcatc	CRISPR spacer
accacgt-catgattttcctgtcatagcgcacg	Protospacer
 . ** * ***********.**** ******.

129. spacer 2.10|480723|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030762 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

-tgacctgcatgattttcccgtcaaagcgcatc	CRISPR spacer
accacgt-catgattttcctgtcatagcgcacg	Protospacer
 . ** * ***********.**** ******.

130. spacer 2.10|480723|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054024 (Rhizobium sp. JKLM12A2 plasmid pPR12A203, complete sequence) position: , mismatch: 8, identity: 0.75

-tgacctgcatgattttcccgtcaaagcgcatc	CRISPR spacer
accacgt-catgattttcctgtcatagcgcacg	Protospacer
 . ** * ***********.**** ******.

131. spacer 2.10|480723|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054035 (Rhizobium sp. JKLM13E plasmid pPR13E04, complete sequence) position: , mismatch: 8, identity: 0.75

-tgacctgcatgattttcccgtcaaagcgcatc	CRISPR spacer
accacgt-catgattttcctgtcatagcgcacg	Protospacer
 . ** * ***********.**** ******.

132. spacer 2.12|480845|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022191 (Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcttcagccatcttgcgcgcctctcgcatggc	CRISPR spacer
tcgtccgccatcttgcgcgcctcggccatcag	Protospacer
** ** *****************   *** .

133. spacer 2.14|480967|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_AP015030 (Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence) position: , mismatch: 8, identity: 0.75

tgaccgccgaaaaggaagacgcgcgcatgacc	CRISPR spacer
gcggcgaggacaaggaagaagcgcgcatgacc	Protospacer
  . **  ** ******** ************

134. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
ttgccgacatagcgccgcatcggcaccacgtc	Protospacer
*.     *.************* *********

135. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP014276 (Martelella sp. AD-3 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
accagttcgtagcgcagcagcgtcagcggata	Protospacer
 ************** *** ***** *. .*

136. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 8, identity: 0.75

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
accagttcgtagcgcagcagcgtcagcggata	Protospacer
 ************** *** ***** *. .*

137. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NC_011961 (Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
tacagttcgtcgcgcggcatcgtcaggccgag	Protospacer
* ******** **** *********   **

138. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 8, identity: 0.75

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
ccgccagccttgaccgcctcgcgcacgagttt	Protospacer
 .******************* *****

139. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP031226 (Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence) position: , mismatch: 8, identity: 0.75

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
aagtgagccttcaccgcctccagcacgtcatc	Protospacer
. *. ****** ******** *********

140. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 8, identity: 0.75

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
ctgcccgccttgaccgcgtcgagcatcgcaaa	Protospacer
 **** *********** *******.  **..

141. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to NC_008243 (Chelativorans sp. BNC1 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
gcacccgccttgacctcctcgagcacgaaatc	Protospacer
*..** ********* ***********  *

142. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP040763 (Paracoccus sp. 2251 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
cccgcggccttgaccgcctcgaccacgccaag	Protospacer
 .  *.**************** ****.**.*

143. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
ctgcccgccttgaccgcatcgagcgtggcaaa	Protospacer
 **** *********** ******..* **..

144. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 8, identity: 0.75

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
ctgcccgccttgaccgcatcgagcgtggcaaa	Protospacer
 **** *********** ******..* **..

145. spacer 2.20|481333|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022191 (Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcttcagccatcttgcgcgcctctcgcatggc	CRISPR spacer
tcgtccgccatcttgcgcgcctcggccatcag	Protospacer
** ** *****************   *** .

146. spacer 2.27|481760|32|NC_018012|CRISPRCasFinder,CRT matches to AP013368 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G11, isolate: uvMED-CGR-U-MedDCM-OCT-S25-C42) position: , mismatch: 8, identity: 0.75

cttttcttagagatatgggcgagcgacctgaa	CRISPR spacer
ctgcacttagacagatgggcgagcgacccaag	Protospacer
** . ****** * **************..*.

147. spacer 2.28|481821|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022424 (Vitreoscilla filiformis strain ATCC 15551 plasmid pVF1, complete sequence) position: , mismatch: 8, identity: 0.75

ctgcccgacggcaagctgtcgtttccgtatga	CRISPR spacer
ctgcccggcggcaagctggcgttttctccgca	Protospacer
*******.********** *****.* .   *

148. spacer 2.29|481882|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP021033 (Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence) position: , mismatch: 8, identity: 0.75

gcgcgcgggtgcatgctgctgctggtcgagat	CRISPR spacer
gcggcgcggcgcatgctgctgctgctcgagcg	Protospacer
***    **.************** *****

149. spacer 2.30|481943|32|NC_018012|CRISPRCasFinder,CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 8, identity: 0.75

ctcggcgggaatatcggcaatcgcataatcgt	CRISPR spacer
ttcggcgggaatagcggcaatcgcggtcccgg	Protospacer
.************ **********.   .**

150. spacer 2.32|482069|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP040824 (Paraoceanicella profunda strain D4M1 plasmid pD4M1F, complete sequence) position: , mismatch: 8, identity: 0.75

ccggattgatggacgtggccaccgtcgcggcg	CRISPR spacer
cactggcgatggacggcgccaccgtcgcggcg	Protospacer
*   . .********  ***************

151. spacer 2.32|482069|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.75

ccggattgatggacgtggccaccgtcgcggcg	CRISPR spacer
aggcggtgatgggcgtggccgccgtcgcggtg	Protospacer
  * . ******.*******.*********.*

152. spacer 2.33|482130|32|NC_018012|CRISPRCasFinder,CRT matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 8, identity: 0.75

gtggcgaattcgagagggttaggcggctgagg	CRISPR spacer
ctggcgaattcgagagggtcatgcgctcgacc	Protospacer
 ******************.* *** ..**

153. spacer 2.34|482191|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP049734 (Rhizobium leguminosarum strain A1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

aacgagggtgcttacccggatcgcattctgat	CRISPR spacer
gtcgagtgtgctcacccggatcgcatcttcct	Protospacer
. **** *****.*************..*  *

154. spacer 2.34|482191|32|NC_018012|CRISPRCasFinder,CRT matches to CP049734 (Rhizobium leguminosarum strain A1 plasmid pRLa11, complete sequence) position: , mismatch: 8, identity: 0.75

aacgagggtgcttacccggatcgcattctgat	CRISPR spacer
gtcgagtgtgctcacccggatcgcatcttcct	Protospacer
. **** *****.*************..*  *

155. spacer 2.34|482191|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP054024 (Rhizobium sp. JKLM12A2 plasmid pPR12A203, complete sequence) position: , mismatch: 8, identity: 0.75

aacgagggtgcttacccggatcgcattctgat	CRISPR spacer
gtcgagtgtgctcacccggatcgcatcttcct	Protospacer
. **** *****.*************..*  *

156. spacer 2.34|482191|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP054035 (Rhizobium sp. JKLM13E plasmid pPR13E04, complete sequence) position: , mismatch: 8, identity: 0.75

aacgagggtgcttacccggatcgcattctgat	CRISPR spacer
gtcgagtgtgctcacccggatcgcatcttcct	Protospacer
. **** *****.*************..*  *

157. spacer 2.37|482374|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

gccggggatcgccgcgcaggcgtcgcgaatcg	CRISPR spacer
tcgcgcgatcgccgcgaaggcggcgcgaaact	Protospacer
 *  * ********** ***** ****** *

158. spacer 2.37|482374|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 8, identity: 0.75

gccggggatcgccgcgcaggcgtcgcgaatcg	CRISPR spacer
tcgcgcgatcgccgcgaaggcggcgcgaaact	Protospacer
 *  * ********** ***** ****** *

159. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP018001 (Rhizobium sp. Y9 plasmid pY9, complete sequence) position: , mismatch: 8, identity: 0.75

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
accgaagccagccacgaggagatgaagcgaaa	Protospacer
************  **********.  **

160. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.75

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
gccgacgccatcaccgaggagatgggcgcccc	Protospacer
.**** **** ************** *  *..

161. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NC_022536 (Rhizobium sp. IRBG74 plasmid IRBL74_p, complete sequence) position: , mismatch: 8, identity: 0.75

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
accgaagccagccacgaggagatgaagcgaaa	Protospacer
************  **********.  **

162. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 8, identity: 0.75

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
gccgacgccatcaccgaggagatgggcgcccc	Protospacer
.**** **** ************** *  *..

163. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NC_015184 (Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence) position: , mismatch: 8, identity: 0.75

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
accgaagccagccacgaggagatgaagcgaaa	Protospacer
************  **********.  **

164. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to CP036360 (Agrobacterium sp. 33MFTa1.1 plasmid p_JBx_073812, complete sequence) position: , mismatch: 8, identity: 0.75

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
accgaagccagccacgaggagatgaagcgaaa	Protospacer
************  **********.  **

165. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP032923 (Agrobacterium tumefaciens strain 1D1108 plasmid pAt1D1108a, complete sequence) position: , mismatch: 8, identity: 0.75

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
accgaagccagccacgaggagatgaagcgaaa	Protospacer
************  **********.  **

166. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP020695 (Sulfitobacter sp. D7 plasmid p1SUD7, complete sequence) position: , mismatch: 8, identity: 0.75

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
atcggcaccagcaccgaggcggtggcccgcgc	Protospacer
*.**. .************ *.******** .

167. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP043850 (Micrococcus luteus strain NCCP 15687 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
ggcgacttcagcgccgaggagatggccagctg	Protospacer
. ***  .****.************** ***

168. spacer 2.41|482618|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP015441 (Erythrobacter atlanticus strain s21-N3 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ccgcgcagctccacctgaacgaagtcggcgac	CRISPR spacer
tcgcgcagctccacctcaacgaaatcgatcct	Protospacer
.*************** ******.***..  .

169. spacer 2.41|482618|32|NC_018012|CRISPRCasFinder,CRT matches to MG925352 (Microbacterium phage Nattles, complete genome) position: , mismatch: 8, identity: 0.75

ccgcgcagctccacctgaacgaagtcggcgac	CRISPR spacer
acacgcagctccagctgaccgaagtctacctc	Protospacer
 *.********** **** ******* .*  *

170. spacer 2.41|482618|32|NC_018012|CRISPRCasFinder,CRT matches to MG839020 (Microbacterium phage Kale, complete genome) position: , mismatch: 8, identity: 0.75

ccgcgcagctccacctgaacgaagtcggcgac	CRISPR spacer
acacgcagctccagctgaccgaagtctacctc	Protospacer
 *.********** **** ******* .*  *

171. spacer 2.41|482618|32|NC_018012|CRISPRCasFinder,CRT matches to MG839022 (Microbacterium phage Ludgate, complete genome) position: , mismatch: 8, identity: 0.75

ccgcgcagctccacctgaacgaagtcggcgac	CRISPR spacer
acacgcagctccagctgaccgaagtctacctc	Protospacer
 *.********** **** ******* .*  *

172. spacer 2.41|482618|32|NC_018012|CRISPRCasFinder,CRT matches to MG962360 (Microbacterium phage AlexAdler, complete genome) position: , mismatch: 8, identity: 0.75

ccgcgcagctccacctgaacgaagtcggcgac	CRISPR spacer
acacgcagctccagctgaccgaagtctacctc	Protospacer
 *.********** **** ******* .*  *

173. spacer 2.43|482740|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

ttgtctgccgccgtgagcgcggcggcaatctc	CRISPR spacer
ggctcggccgccgtgggcgcggcggcgggctc	Protospacer
   ** *********.**********.. ***

174. spacer 2.43|482740|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ttgtctgccgccgtgagcgcggcggcaatctc	CRISPR spacer
ggctcggccgccgtgggcgcggcggcgggctc	Protospacer
   ** *********.**********.. ***

175. spacer 2.43|482740|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 8, identity: 0.75

ttgtctgccgccgtgagcgcggcggcaatctc	CRISPR spacer
ctgatcgccgccgtgcgcgcggcggcgattgc	Protospacer
.** ..********* **********.**. *

176. spacer 4.9|1162141|32|NC_018012|CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 8, identity: 0.75

tatacggccgctcccgagccggtcaaggtggc	CRISPR spacer
tgggcggcctcgcccgagccggtcaaggccga	Protospacer
*. .***** * ****************. *

177. spacer 4.9|1162141|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tatacggccgctcccgagccggtcaaggtggc	CRISPR spacer
aagccggccgctcccaagccgatcaaggacgt	Protospacer
 *  ***********.*****.******  *.

178. spacer 4.9|1162141|32|NC_018012|CRISPRCasFinder,CRT matches to NC_023609 (Mycobacterium phage RhynO, complete genome) position: , mismatch: 8, identity: 0.75

tatacggccgctcccgagccggtcaaggtggc	CRISPR spacer
gagccggccgctcccgcgccggtcgaggcgaa	Protospacer
 *  ************ *******.***.*.

179. spacer 4.9|1162141|32|NC_018012|CRISPRCasFinder,CRT matches to JN882265 (Halorubrum pleomorphic virus 3, complete genome) position: , mismatch: 8, identity: 0.75

tatacggccgctcccgagccggtcaaggtggc	CRISPR spacer
gagacgaccgctcccgagacggtcaacatccc	Protospacer
 * ***.*********** ******* .*  *

180. spacer 4.13|1162385|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 8, identity: 0.75

cgacaggcgcggaacaggctgatgcgggtgtg	CRISPR spacer
gcaccctcgccgaacaggctgctgcgggtgtt	Protospacer
  **   *** ********** *********

181. spacer 4.18|1162690|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 8, identity: 0.75

ttcggtttcgcgcgcggcaattgcgcgatttc	CRISPR spacer
tgaggtttcgcgcgcgggatttgcgcccaatc	Protospacer
*  ************** * ******    **

182. spacer 4.19|1162751|32|NC_018012|CRISPRCasFinder,CRT matches to NC_010627 (Paraburkholderia phymatum STM815 plasmid pBPHY02, complete sequence) position: , mismatch: 8, identity: 0.75

gccgtcccggtcgctccgggacggttttttta	CRISPR spacer
gtcgacccggacgctccgggacggtatctggc	Protospacer
*.** ***** ************** *.*

183. spacer 4.27|1162146|33|NC_018012|PILER-CR matches to NZ_CP034185 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

tatacggccgctcccgagccggtcaaggtggcg	CRISPR spacer
gcgacagccgctcccgagccgctcaaggtgcaa	Protospacer
   **.*************** ********  .

184. spacer 4.27|1162146|33|NC_018012|PILER-CR matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 8, identity: 0.758

tatacggccgctcccgagccggtcaaggtggcg	CRISPR spacer
tgggcggcctcgcccgagccggtcaaggccgag	Protospacer
*. .***** * ****************. * *

185. spacer 4.27|1162146|33|NC_018012|PILER-CR matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tatacggccgctcccgagccggtcaaggtggcg	CRISPR spacer
aagccggccgctcccaagccgatcaaggacgtg	Protospacer
 *  ***********.*****.******  *.*

186. spacer 4.27|1162146|33|NC_018012|PILER-CR matches to NC_023609 (Mycobacterium phage RhynO, complete genome) position: , mismatch: 8, identity: 0.758

tatacggccgctcccgagccggtcaaggtggcg	CRISPR spacer
gagccggccgctcccgcgccggtcgaggcgaag	Protospacer
 *  ************ *******.***.*. *

187. spacer 6.1|1764732|32|NC_018012|CRISPRCasFinder matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 8, identity: 0.75

ccgaccaggccatgtatcaggccaagctatcc	CRISPR spacer
ccgacaaggctatgtatcaggccaagacgcag	Protospacer
***** ****.*************** ...

188. spacer 6.1|1764732|32|NC_018012|CRISPRCasFinder matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 8, identity: 0.75

ccgaccaggccatgtatcaggccaagctatcc	CRISPR spacer
ccgacaaggctatgtatcaggccaagacgcag	Protospacer
***** ****.*************** ...

189. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NC_023283 (Streptomyces sp. FR1 plasmid pFRL3, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ttgcgcaggtcggcggcggcctgttcgggcgg	Protospacer
 . ********  ****************.

190. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NC_023284 (Streptomyces sp. F2 plasmid pFRL4, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ttgcgcaggtcggcggcggcctgttcgggcgg	Protospacer
 . ********  ****************.

191. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
tcccgctggtcttcgccggcctgttcatcctg	Protospacer
 ***** ******** **********.  .*

192. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
tcccgctggtcttcgccggcctgttcatcctg	Protospacer
 ***** ******** **********.  .*

193. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
atccgcaggccttcggcggcctcttcgagagg	Protospacer
..*******.************ ****.*

194. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP017104 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872c, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cggcccaggtcttcggcgggttgttcgggtcg	Protospacer
   * ************** .*********.

195. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
catcccaggtctgcggcggcttgttcgggtcg	Protospacer
  .* ******* *******.*********.

196. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
tcccgctggtcttcgccggcctgttcatcctg	Protospacer
 ***** ******** **********.  .*

197. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
catcccaggtctgcggcggcttgttcgggtcg	Protospacer
  .* ******* *******.*********.

198. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cgtcccaggtctgcggcggcttgttcgggtcg	Protospacer
  .* ******* *******.*********.

199. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP053207 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
catcccaggtctgcggcggcttgttcgggtcg	Protospacer
  .* ******* *******.*********.

200. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to CP006879 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602b, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cggcccaggtcttcggcgggttgttcgggtcg	Protospacer
   * ************** .*********.

201. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP036407 (Komagataeibacter saccharivorans strain JH1 plasmid p92689, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
gaccgcaggtgttcggcagcctgttcatagcc	Protospacer
* ******** ******.********. . .*

202. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP035092 (Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
tgccgcatgtcttcgtcggcctgttcatgggc	Protospacer
  ***** ******* **********. *  *

203. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NC_008688 (Paracoccus denitrificans PD1222 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
tgccgcatgtcttcgtcggcctgttcatgggc	Protospacer
  ***** ******* **********. *  *

204. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
acctccagttcttcggccgcctgttcggcctg	Protospacer
.**. *** ******** ********** .*

205. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
gcacgcaggtcctcggcggcctggacccgcgc	Protospacer
** ********.***********  *  *. *

206. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
atctccagttcttcggccgcctgttcggcctc	Protospacer
..*. *** ******** ********** .**

207. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
atctccagttcttcggccgcctgttcggcctc	Protospacer
..*. *** ******** ********** .**

208. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP054622 (Azospirillum oryzae strain KACC 14407 plasmid unnamed7, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ccaagatgctcttcggcgttctgttcgggttc	Protospacer
 *  *  * ********* .************

209. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
gcacgcaggtcctcggcggcctggacccgcgc	Protospacer
** ********.***********  *  *. *

210. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP039651 (Azospirillum sp. TSA2s plasmid p1) position: , mismatch: 8, identity: 0.75

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ccaagatgctcttcggcgttctgttcgggttc	Protospacer
 *  *  * ********* .************

211. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to MT024869 (Arthrobacter phage Lego, complete genome) position: , mismatch: 8, identity: 0.75

-----gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
tgacggcct-----tcttcggcggccggttcgggctc	Protospacer
     ***.     ************ *******.**

212. spacer 15.6|4879519|35|NC_018012|CRT,PILER-CR matches to NZ_CP007144 (Hymenobacter swuensis DY53 plasmid pHsw1, complete sequence) position: , mismatch: 8, identity: 0.771

tgcggtgaccttggcgatgttgccggtcagtgcgc-	CRISPR spacer
gtcggtgagcttggcgctgttgccggt-gctgcacc	Protospacer
  ****** ******* ********** . ***.*

213. spacer 2.2|480235|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019438 (Thioclava nitratireducens strain 25B10_4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tgacggcgacgggcggggcgattgggcctgct	CRISPR spacer
acgccgcgacgggcggggcgatggtgccgacg	Protospacer
  .* ***************** * *** .*

214. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036456 (Streptomonospora sp. M2 plasmid phiM2, complete sequence) position: , mismatch: 9, identity: 0.719

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
cccgctcgatgccgtcgacgcgctgaacgagc	Protospacer
*.    **************** * **** *

215. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
tgatgccgatgctgtcgacgcgatcggggtag	Protospacer
. *** ******.************.. *..*

216. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 9, identity: 0.719

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
tgatgccgatgctgtcgacgcgatcggggtag	Protospacer
. *** ******.************.. *..*

217. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NC_008703 (Mycobacterium sp. KMS plasmid pMKMS01, complete sequence) position: , mismatch: 9, identity: 0.719

ctatgacgatgccgtcgacgcgatcaacgcgg---	CRISPR spacer
tcgtgacgatgccgtcgacaccatca---cgaacc	Protospacer
...****************.* ****   **.

218. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MT498062 (Microbacterium phage Leafus, complete genome) position: , mismatch: 9, identity: 0.719

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
ccgcgccgatgccgccgatgcgatcaacgacc	Protospacer
*...* ********.***.**********

219. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MG839030 (Microbacterium phage Balsa, complete genome) position: , mismatch: 9, identity: 0.719

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
ccgcgccgatgccgccgatgcgatcaacgacc	Protospacer
*...* ********.***.**********

220. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MH479922 (Microbacterium phage Redfield, complete genome) position: , mismatch: 9, identity: 0.719

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
ccgcgccgatgccgccgatgcgatcaacgacc	Protospacer
*...* ********.***.**********

221. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MG839024 (Microbacterium phage Peppino, complete genome) position: , mismatch: 9, identity: 0.719

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
ccgcgccgatgccgccgatgcgatcaacgacc	Protospacer
*...* ********.***.**********

222. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MG839025 (Microbacterium phage Raccoon, complete genome) position: , mismatch: 9, identity: 0.719

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
ccgcgccgatgccgccgatgcgatcaacgacc	Protospacer
*...* ********.***.**********

223. spacer 2.3|480296|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NC_042110 (Microbacterium phage Hamlet, complete genome) position: , mismatch: 9, identity: 0.719

ctatgacgatgccgtcgacgcgatcaacgcgg	CRISPR spacer
ccgcgccgatgccgccgatgcgatcaacgacc	Protospacer
*...* ********.***.**********

224. spacer 2.6|480479|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to CP027641 (Escherichia coli strain 2014C-4705 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gctatcagtggatgggcgccggcggcaatgtt	CRISPR spacer
aacaccactggatgggtgccggcggcaagatc	Protospacer
. .*.** ********.*********** .*.

225. spacer 2.6|480479|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to CP027674 (Escherichia coli strain 2014C-3003 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gctatcagtggatgggcgccggcggcaatgtt	CRISPR spacer
aacaccactggatgggtgccggcggcaagatc	Protospacer
. .*.** ********.*********** .*.

226. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013855 (Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence) position: , mismatch: 9, identity: 0.719

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcctcggccccggcgaggtcgccgacgagtaa	Protospacer
 *   *** ***************** **  .

227. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021071 (Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence) position: , mismatch: 9, identity: 0.719

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
ggctgggcaccgccgaggtcgccgagcacgct	Protospacer
*   ******** ************ ** ..

228. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 9, identity: 0.719

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
gcaagggcggcggcgaggtcgccatcggcagc	Protospacer
********. *************. * . *

229. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
gcaagggcggcggcgaggtcgccatcggcagc	Protospacer
********. *************. * . *

230. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
gcaagggcggcggcgaggtcgccatcggcagc	Protospacer
********. *************. * . *

231. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 9, identity: 0.719

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
gcaagggcggcggcgaggtcgccatcggcagc	Protospacer
********. *************. * . *

232. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 9, identity: 0.719

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
gcaagggcggcggcgaggtcgccatcggcagc	Protospacer
********. *************. * . *

233. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 9, identity: 0.719

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tgtcgttcgcccgcgaggtcgccgaccaggtg	Protospacer
    *  *.** *****************.**

234. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tccaccgcatcgccgaggtcgccgaccagtgc	Protospacer
 * *  ***.** ****************

235. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020952 (Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence) position: , mismatch: 9, identity: 0.719

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tgtcgcgtgccggcgaggtcgccgacctgttg	Protospacer
    * *..****************** * **

236. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043502 (Bacillus paralicheniformis strain A4-3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
gtatcatcaccggcgaggtgtccgaccagaat	Protospacer
*.*  . ************  *********

237. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029834 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
cgcaccgcaccggcgacgccgccgaccagttc	Protospacer
   *  ********** *.********** *

238. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 9, identity: 0.719

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
attacggcaccgaggaggtcgccgaccatgcg	Protospacer
.. * *******. ************** ..*

239. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046575 (Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence) position: , mismatch: 9, identity: 0.719

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tcgagggcaccggcgagttcgtcgacagccag	Protospacer
 *.************** ***.**** .   *

240. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to KJ410133 (Mycobacterium phage Jolie2, complete genome) position: , mismatch: 9, identity: 0.719

gcaagggcaccggcgaggtcgccgaccagatg---	CRISPR spacer
agaagggcaccggcgagcgcgccg---aaatctat	Protospacer
. ***************  *****   *.**

241. spacer 2.13|480906|32|NC_018012|CRISPRCasFinder,CRT matches to NC_018532 (Arthrobacter sp. Rue61a plasmid p232, complete sequence) position: , mismatch: 9, identity: 0.719

ctttcgacggcatggcggacgtctccaacgcc	CRISPR spacer
tggtcgacggcaagccggacgtctccacggaa	Protospacer
.  ********* * ************  *

242. spacer 2.14|480967|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP039632 (Pseudomonas veronii strain Pvy plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tgaccgccgaaaaggaagacgcgcgcatgacc	CRISPR spacer
gcggcgaggacaaggaagaagcgcgcatgacg	Protospacer
  . **  ** ******** ***********

243. spacer 2.14|480967|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP021372 (Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence) position: , mismatch: 9, identity: 0.719

tgaccgccgaaaaggaagacgcgcgcatgacc	CRISPR spacer
gcggcgaggacaaggaagaggcgcgcatgacg	Protospacer
  . **  ** ******** ***********

244. spacer 2.14|480967|32|NC_018012|CRISPRCasFinder,CRT matches to NC_011982 (Agrobacterium vitis S4 plasmid pTiS4, complete sequence) position: , mismatch: 9, identity: 0.719

tgaccgccgaaaaggaagacgcgcgcatgacc	CRISPR spacer
ccaagccacaaacggaatacgcgcgcatgacc	Protospacer
. *   *  *** **** **************

245. spacer 2.14|480967|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_KY000075 (Agrobacterium vitis strain CFBP2681 plasmid pTi_CFBP2681, complete sequence) position: , mismatch: 9, identity: 0.719

tgaccgccgaaaaggaagacgcgcgcatgacc	CRISPR spacer
ccaagccacaaacggaatacgcgcgcatgacc	Protospacer
. *   *  *** **** **************

246. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
ttgccgacatagcgccgcatgggcaccacgtc	Protospacer
*.     *.*********** * *********

247. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 9, identity: 0.719

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
ttgccgacatagcgccgcatgggcaccacgtc	Protospacer
*.     *.*********** * *********

248. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
ttgccgacatagcgccgcatgggcaccacgtc	Protospacer
*.     *.*********** * *********

249. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
ttgccgacatagcgccgcatgggcaccacgtc	Protospacer
*.     *.*********** * *********

250. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
ttgccgacatagcgccgcatgggcaccacgtc	Protospacer
*.     *.*********** * *********

251. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
ttgccgacatagcgccgcatgggcaccacgtc	Protospacer
*.     *.*********** * *********

252. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
ttgccgacatagcgccgcatgggcaccacgtc	Protospacer
*.     *.*********** * *********

253. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
ttgccgacatagcgccgcatgggcaccacgtc	Protospacer
*.     *.*********** * *********

254. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
ttgccgacatagcgccgcatgggcaccacgtc	Protospacer
*.     *.*********** * *********

255. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
ttgccgacatagcgccgcatgggcaccacgtc	Protospacer
*.     *.*********** * *********

256. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
ttgccgacatagcgccgcatgggcaccacgtc	Protospacer
*.     *.*********** * *********

257. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
ttgccgacatagcgccgcatgggcaccacgtc	Protospacer
*.     *.*********** * *********

258. spacer 2.16|481089|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tccagttcgtagcgccgcatcgtcaccacgtc	CRISPR spacer
ttgccgacatagcgccgcatgggcaccacgtc	Protospacer
*.     *.*********** * *********

259. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP024309 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3b, complete sequence) position: , mismatch: 9, identity: 0.719

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
tcgatgcgcttgaccgcctcgagcgcgacagg	Protospacer
 .* ..  ****************.** ****

260. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 9, identity: 0.719

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
ctgccggccttgagcgcctcgagcgcctgctc	Protospacer
 ****.******* **********.* *

261. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 9, identity: 0.719

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
cctgctgccttggccgcctcgagcccgtcgag	Protospacer
 .  * ******.*********** ****..*

262. spacer 2.25|481638|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP018472 (Xanthomonas perforans strain LH3 plasmid pLH3.1, complete sequence) position: , mismatch: 9, identity: 0.719

cggatgccaggcttcttcatcaagcggacgct	CRISPR spacer
ttgaaaccaagcgtcttcatcaagcggaccaa	Protospacer
. ** .***.** ****************

263. spacer 2.25|481638|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP018726 (Xanthomonas vesicatoria ATCC 35937 strain LMG911 plasmid pLMG911.1, complete sequence) position: , mismatch: 9, identity: 0.719

cggatgccaggcttcttcatcaagcggacgct	CRISPR spacer
ttgaaaccaagcgtcttcatcaagcggaccaa	Protospacer
. ** .***.** ****************

264. spacer 2.25|481638|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP018732 (Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.1, complete sequence) position: , mismatch: 9, identity: 0.719

cggatgccaggcttcttcatcaagcggacgct	CRISPR spacer
ttgaaaccaagcgtcttcatcaagcggaccaa	Protospacer
. ** .***.** ****************

265. spacer 2.29|481882|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP020041 (Streptomyces sp. 3211 isolate 3 plasmid p3211-2, complete sequence) position: , mismatch: 9, identity: 0.719

gcgcgcgggtgcatgctgctgctggtcgagat	CRISPR spacer
cctcgcgggtgaatgcggctgctggtgtggca	Protospacer
 * ******** **** *********  .*

266. spacer 2.30|481943|32|NC_018012|CRISPRCasFinder,CRT matches to NC_014811 (Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence) position: , mismatch: 9, identity: 0.719

ctcggcgggaatatcggcaatcgcataatcgt	CRISPR spacer
gtcggcgggaatgtcggcgatcgcgttggctg	Protospacer
 ***********.*****.*****.* . *

267. spacer 2.32|482069|32|NC_018012|CRISPRCasFinder,CRT matches to NC_010851 (Streptomyces sp. FR1 plasmid pFRL1, complete sequence) position: , mismatch: 9, identity: 0.719

ccggattgatggacgtggccaccgtcgcggcg	CRISPR spacer
cgaagggcatggacgcggccgccgtcgcggcg	Protospacer
* ...   *******.****.***********

268. spacer 2.37|482374|32|NC_018012|CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 9, identity: 0.719

gccggggatcgccgcgcaggcgtcgcgaatcg	CRISPR spacer
tcgcgcgatcgccgcgaaggcggcgcgaaatt	Protospacer
 *  * ********** ***** ****** .

269. spacer 2.37|482374|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_LR134451 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence) position: , mismatch: 9, identity: 0.719

gccggggatcgccgcgcaggcgtcgcgaatcg	CRISPR spacer
gtccgggatcgccacgtaggcgtcgcggggga	Protospacer
*.* *********.**.**********..  .

270. spacer 2.37|482374|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 9, identity: 0.719

gccggggatcgccgcgcaggcgtcgcgaatcg	CRISPR spacer
cctgggcatcgccgcgcaggcgttgcatctga	Protospacer
 *.*** ****************.**.  * .

271. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 9, identity: 0.719

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
ccgcccgccagcaccgtggacatggcccgcgg	Protospacer
 *    ********** *** *********

272. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
ccgcccgccagcaccgtggacatggcccgcgc	Protospacer
 *    ********** *** ********* .

273. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
ccgcccgccagcaccgtggacatggcccgcgg	Protospacer
 *    ********** *** *********

274. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
ccgcccgccagcaccgtggacatggcccgcgc	Protospacer
 *    ********** *** ********* .

275. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
ccgcccgccagcaccgtggacatggcccgcgc	Protospacer
 *    ********** *** ********* .

276. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
ccgcccgccagcaccgtggacatggcccgcgc	Protospacer
 *    ********** *** ********* .

277. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to KT997829 (Uncultured Mediterranean phage uvDeep-CGR0-KM22-C158, complete genome) position: , mismatch: 9, identity: 0.719

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
atgaaagtcagcaccgaggatatggccctgga	Protospacer
*. .***.************ *******

278. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 9, identity: 0.719

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
atgcgtaccaccgccgaggagatggcccgcgt	Protospacer
*.  . .*** *.***************** *

279. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 9, identity: 0.719

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
atgcgtaccaccgccgaggagatggcccgcgt	Protospacer
*.  . .*** *.***************** *

280. spacer 2.42|482679|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP044066 (Cupriavidus pauculus strain FDAARGOS_664 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

accccgcgaccggcgaaacccacatggccctc	CRISPR spacer
gacccgggaccggcgagacccacatcggcact	Protospacer
. **** *********.******** * * ..

281. spacer 2.43|482740|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022371 (Bosea sp. AS-1 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgtctgccgccgtgagcgcggcggcaatctc	CRISPR spacer
tccggccccgccgcgagcgcggcggcgatcgc	Protospacer
*.   . ******.************.*** *

282. spacer 4.3|1161775|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.719

gtccaggtcggcactcatcgtgacggtgccga	CRISPR spacer
gtccaggtcggccatcatcgtgatcgcttctt	Protospacer
************  *********. *. .*

283. spacer 4.3|1161775|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP035215 (Klebsiella michiganensis strain M82255 plasmid pKOCBH-A, complete sequence) position: , mismatch: 9, identity: 0.719

gtccaggtcggcactcatcgtgacggtgccga	CRISPR spacer
catgatgacggcactcaacctgacggtgccgg	Protospacer
  . * * ********* * ***********.

284. spacer 4.3|1161775|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP035216 (Klebsiella michiganensis strain M82255 plasmid pKOCBH-B, complete sequence) position: , mismatch: 9, identity: 0.719

gtccaggtcggcactcatcgtgacggtgccga	CRISPR spacer
catgatgacggcactcaacctgacggtgccgg	Protospacer
  . * * ********* * ***********.

285. spacer 4.3|1161775|32|NC_018012|CRISPRCasFinder,CRT matches to NC_014718 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence) position: , mismatch: 9, identity: 0.719

gtccaggtcggcactcatcgtgacggtgccga	CRISPR spacer
ttggaaagcggcactgatcgtgacggcgccgc	Protospacer
 *  *.. ******* **********.****

286. spacer 4.3|1161775|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gtccaggtcggcactcatcgtgacggtgccga	CRISPR spacer
caacctgccggcactgatcgtgacggagccgg	Protospacer
   *  *.******* ********** ****.

287. spacer 4.3|1161775|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_LN833432 (Acinetobacter baumannii isolate CHI-32 plasmid pNDM-32, complete sequence) position: , mismatch: 9, identity: 0.719

gtccaggtcggcactcatcgtgacggtgccga	CRISPR spacer
catgatgacggcactcaacctgacggtgccgg	Protospacer
  . * * ********* * ***********.

288. spacer 4.7|1162019|32|NC_018012|CRISPRCasFinder,CRT matches to MK415400 (Phage apr34_1784, complete genome) position: , mismatch: 9, identity: 0.719

gttttgtctgcgttgtctacgtttttaagacg	CRISPR spacer
cttttgcctgcgttgtcaacgtttcaaaattt	Protospacer
 *****.********** ******. **. .

289. spacer 4.9|1162141|32|NC_018012|CRISPRCasFinder,CRT matches to MK977705 (Gordonia Phage Mollymur, complete genome) position: , mismatch: 9, identity: 0.719

tatacggccgctcccgagccggtcaaggtggc	CRISPR spacer
tcggcggccggtgccgagccggtcaagccgaa	Protospacer
*  .****** * ************** .*.

290. spacer 4.13|1162385|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP027794 (Rhodococcus hoagii strain DSSKP-R-001 plasmid plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgacaggcgcggaacaggctgatgcgggtgtg	CRISPR spacer
tgcgcggcgtcgaacaggctgatgcgggcgcc	Protospacer
.*   ****. *****************.*.

291. spacer 4.15|1162507|32|NC_018012|CRISPRCasFinder,CRT matches to MN850573 (Escherichia phage muut, complete genome) position: , mismatch: 9, identity: 0.719

cagggcggcgaattccttcttgaccatcatcg	CRISPR spacer
gagaaaaacgaattacttcttgaccaccatct	Protospacer
 **.. ..****** ***********.****

292. spacer 4.15|1162507|32|NC_018012|CRISPRCasFinder,CRT matches to KU522583 (Enterobacteria phage ECGD1, complete genome) position: , mismatch: 9, identity: 0.719

cagggcggcgaattccttcttgaccatcatcg	CRISPR spacer
gagaaaaacgaattacttcttgaccaccatct	Protospacer
 **.. ..****** ***********.****

293. spacer 4.15|1162507|32|NC_018012|CRISPRCasFinder,CRT matches to MN850584 (Escherichia phage arall, complete genome) position: , mismatch: 9, identity: 0.719

cagggcggcgaattccttcttgaccatcatcg	CRISPR spacer
gagaaaaacgaattacttcttgaccaccatct	Protospacer
 **.. ..****** ***********.****

294. spacer 4.15|1162507|32|NC_018012|CRISPRCasFinder,CRT matches to MF805809 (Escherichia phage vB_EcoM_PHB05, complete genome) position: , mismatch: 9, identity: 0.719

cagggcggcgaattccttcttgaccatcatcg	CRISPR spacer
gagaaaaacgaattacttcttgaccaccatct	Protospacer
 **.. ..****** ***********.****

295. spacer 4.15|1162507|32|NC_018012|CRISPRCasFinder,CRT matches to MH675927 (Escherichia phage vB_vPM_PD114, complete genome) position: , mismatch: 9, identity: 0.719

cagggcggcgaattccttcttgaccatcatcg	CRISPR spacer
gagaaaaacgaattacttcttgaccaccatct	Protospacer
 **.. ..****** ***********.****

296. spacer 4.15|1162507|32|NC_018012|CRISPRCasFinder,CRT matches to MH816848 (Escherichia phage vB_vPM_PD06, complete genome) position: , mismatch: 9, identity: 0.719

cagggcggcgaattccttcttgaccatcatcg	CRISPR spacer
gagaaaaacgaattacttcttgaccaccatct	Protospacer
 **.. ..****** ***********.****

297. spacer 4.15|1162507|32|NC_018012|CRISPRCasFinder,CRT matches to MN850632 (Escherichia phage alia, complete genome) position: , mismatch: 9, identity: 0.719

cagggcggcgaattccttcttgaccatcatcg	CRISPR spacer
gagaaaaacgaattacttcttgaccaccatct	Protospacer
 **.. ..****** ***********.****

298. spacer 4.31|1162390|33|NC_018012|PILER-CR matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 9, identity: 0.727

cgacaggcgcggaacaggctgatgcgggtgtgg	CRISPR spacer
gcaccctcgccgaacaggctgctgcgggtgttc	Protospacer
  **   *** ********** *********

299. spacer 6.1|1764732|32|NC_018012|CRISPRCasFinder matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaccaggccatgtatcaggccaagctatcc	CRISPR spacer
cggaccaggccatgtatgcggccaaaagcgcg	Protospacer
* ***************  ******.    *

300. spacer 6.1|1764732|32|NC_018012|CRISPRCasFinder matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaccaggccatgtatcaggccaagctatcc	CRISPR spacer
cggaccaggccatgtatgcggccaaaagcgcg	Protospacer
* ***************  ******.    *

301. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
tgccgcacgtcttcgtcggcctgttcatgggg	Protospacer
  ***** ******* **********. *

302. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cgccgcagatcttcggcgacctgttccaggcg	Protospacer
  ******.*********.******* .* .

303. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ccgcgcagatcttcggcgacctgttccaggcg	Protospacer
 * *****.*********.******* .* .

304. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cgccgcagatcttcggcgacctgttccaggcg	Protospacer
  ******.*********.******* .* .

305. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
tgccgcacgtcttcgtcggcctgttcatgggg	Protospacer
  ***** ******* **********. *

306. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
tgccgcacgtcttcgtcggcctgttcatgggg	Protospacer
  ***** ******* **********. *

307. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cgccgcagatcttcggcgacctgttccaggcg	Protospacer
  ******.*********.******* .* .

308. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NC_006571 (Streptomyces albulus plasmid pNO33 DNA, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
atttccaggacttcggcggcccgttcggggcc	Protospacer
.... **** ***********.******* .*

309. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cgccgcagatcttcggcgacctgttccaggcg	Protospacer
  ******.*********.******* .* .

310. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
tgccgcacgtcttcgtcggcctgttcatgggg	Protospacer
  ***** ******* **********. *

311. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cgccgcagatcttcggcgacctgttccaggcg	Protospacer
  ******.*********.******* .* .

312. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cgccgcagatcttcggcgacctgttccaggcg	Protospacer
  ******.*********.******* .* .

313. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP050094 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b4, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cgtcccaggtctgcggcggcttgttcggatcg	Protospacer
  .* ******* *******.*******.*.

314. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP050106 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ttcagccggccttcggcggcctgttcgatgac	Protospacer
 .* ** **.*****************.   *

315. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP021360 (Acidovorax carolinensis strain NA2 plasmid pACNA2.1, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
gcccgcacgtcttcggcgacctgcgcaccggc	Protospacer
******* **********.****. *.    *

316. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
gcgatgtcgtcttcggcggccagtgcgggttg	Protospacer
**      ************* ** ******

317. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NC_011371 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG204, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cgtcccaggtctgcggcggcttgttcggatcg	Protospacer
  .* ******* *******.*******.*.

318. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP021367 (Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
gcccgcacgtcttcggcgacctgcgcaccggc	Protospacer
******* **********.****. *.    *

319. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP050111 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ttcagccggccttcggcggcctgttcgatgac	Protospacer
 .* ** **.*****************.   *

320. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP030763 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ttcagccggccttcggcggcctgttcgatgac	Protospacer
 .* ** **.*****************.   *

321. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP021363 (Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
gcccgcacgtcttcggcgacctgcgcaccggc	Protospacer
******* **********.****. *.    *

322. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cgtcccaggtctgcggcggcttgttcggatca	Protospacer
  .* ******* *******.*******.*.

323. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cgtcccaggtctgcggcggcttgttcggatca	Protospacer
  .* ******* *******.*******.*.

324. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP050088 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ttcagccggccttcggcggcctgttcgatgac	Protospacer
 .* ** **.*****************.   *

325. spacer 15.6|4879519|35|NC_018012|CRT,PILER-CR matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 9, identity: 0.743

tgcggtgaccttggcgatgttgccggtcagtgcgc	CRISPR spacer
cgccttgtccttggcgatcttgccggtcagcaccg	Protospacer
.**  ** ********** ***********..*

326. spacer 16.8|4881558|35|NC_018012|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.743

acctcgccgaccgcgtccacctcggc--acctaccaa	CRISPR spacer
tcctcgccgaacgcgtccaccgcggccagctcgcc--	Protospacer
 ********* ********** ****  .*...**

327. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.688

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
aggccgatcccgccgaggtcgccgagcagatg	Protospacer
. .  *.. *** ************ ******

328. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.688

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
agaagggcaccggcgaggtcatcgaaggacag	Protospacer
. ******************..***  ..  *

329. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022417 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-2, complete sequence) position: , mismatch: 10, identity: 0.688

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
attatggcaccagcgaggtcgcggaccacgcc	Protospacer
.. * ******.********** ***** ..

330. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to CP054924 (Verrucosispora sp. NA02020 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
cggtggacaccggcgtggtcgccgacctcagc	Protospacer
  . **.******** ***********  *

331. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040249 (Mycobacterium avium subsp. hominissuis strain 101174 plasmid pMARIA, complete sequence) position: , mismatch: 10, identity: 0.688

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
aggcgggcaccggtaaggtcgccgaccccaca	Protospacer
. . *********..************  *..

332. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 10, identity: 0.688

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
aaccgggcaccggcgagatcgcctaccccttt	Protospacer
.   *************.***** ***   *

333. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 10, identity: 0.688

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
cggatggcatcggcgatgtcgccgaccacgcc	Protospacer
  .* ****.****** *********** ..

334. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP005085 (Sphingobium sp. TKS plasmid pTK1, complete sequence) position: , mismatch: 10, identity: 0.688

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
ttgcacgcaccggcgaggccgacgaccaggcg	Protospacer
 .. . ************.** *******..*

335. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to KY092484 (Streptomyces phage Raleigh, complete genome) position: , mismatch: 10, identity: 0.688

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
ggcagggcaccggcgagggcggcgacggcgga	Protospacer
*  *************** ** **** . . .

336. spacer 2.9|480662|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN890657 (Candidatus Promineofilum breve strain Cfx-K plasmid III, complete sequence) position: , mismatch: 10, identity: 0.688

ttccggccccatctcgccgacaattcgcaagc	CRISPR spacer
ctccggccccacctcgccgacgatgtaggggt	Protospacer
.**********.*********.** .. ..*.

337. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 10, identity: 0.688

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
atgcccgccttgaacgcctcgagcggagagga	Protospacer
.**** ******* **********. .  .*.

338. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 10, identity: 0.688

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
atgcccgccttgaacgcctcgagcggagagga	Protospacer
.**** ******* **********. .  .*.

339. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 10, identity: 0.688

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
accatcgccttgaacgcctcgtgcacgtcggc	Protospacer
..  . ******* ******* *******.*

340. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to MN204493 (Streptomyces phage Zuko, complete genome) position: , mismatch: 10, identity: 0.688

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
ctcagcgccttgaccgcctccaccacgtcctc	Protospacer
 *    ************** * ******

341. spacer 2.19|481272|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP041766 (Tomitella sp. HY188 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gtctcaccggacatgtgggcgcagatcgagcg	CRISPR spacer
tccacaccggacctgtgggcgcggatcactgc	Protospacer
 .* ******** *********.****.

342. spacer 2.24|481577|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

cctttcaatcgatggcggccgcctcaaagggg	CRISPR spacer
aggaacgctcgatggcggccgccttaaggggc	Protospacer
     *. ****************.**.***

343. spacer 2.25|481638|32|NC_018012|CRISPRCasFinder,CRT matches to MT536174 (Stenotrophomonas phage vB_SmaS-AXL_3, complete genome) position: , mismatch: 10, identity: 0.688

cggatgccaggcttcttcatcaagcggacgct	CRISPR spacer
tagtcgccaggcttcttcaccacgcggaacag	Protospacer
..* .**************.** *****

344. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 10, identity: 0.688

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
cgccccgccagccccgaggagatagcccgggc	Protospacer
  *   ****** **********.*****  .

345. spacer 2.38|482435|32|NC_018012|CRISPRCasFinder,CRT matches to NC_022087 (Mycobacterium phage AnnaL29, complete genome) position: , mismatch: 10, identity: 0.688

accgaagccagcaccgaggagatggcccgctt	CRISPR spacer
gttcagaccagcaccgaggatctggcccgcca	Protospacer
... *..*************  ********.

346. spacer 2.42|482679|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP049245 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

accccgcgaccggcgaaacccacatggccctc	CRISPR spacer
ttgccgcgaccggcgaaacgctcatgcacaag	Protospacer
 . **************** * ****  *

347. spacer 2.42|482679|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 10, identity: 0.688

accccgcgaccggcgaaacccacatggccctc	CRISPR spacer
gcatggcgaccgccgaaagccacatggcgaag	Protospacer
.* . ******* ***** *********

348. spacer 2.42|482679|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 10, identity: 0.688

accccgcgaccggcgaaacccacatggccctc	CRISPR spacer
gcatggcgaccgccgaaagccacatggcgaag	Protospacer
.* . ******* ***** *********

349. spacer 2.43|482740|32|NC_018012|CRISPRCasFinder,CRT matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.688

ttgtctgccgccgtgagcgcggcggcaatctc	CRISPR spacer
accgctgccgcggcgagcgcggcggcagccgg	Protospacer
 .  ******* *.*************..*

350. spacer 2.43|482740|32|NC_018012|CRISPRCasFinder,CRT matches to CP000619 (Burkholderia vietnamiensis G4 plasmid pBVIE03, complete sequence) position: , mismatch: 10, identity: 0.688

ttgtctgccgccgtgagcgcggcggcaatctc	CRISPR spacer
ccgaacgccgccgtaatcgcggcggcaatgat	Protospacer
..*  .********.* ************  .

351. spacer 2.43|482740|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP012698 (Microbacterium sp. No. 7 plasmid A, complete sequence) position: , mismatch: 10, identity: 0.688

ttgtctgccgccgtgagcgcggcggcaatctc	CRISPR spacer
atgtctgccgcggtgagggcggcgaggagggt	Protospacer
 ********** ***** ******. .*   .

352. spacer 2.44|482801|32|NC_018012|CRISPRCasFinder,CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 10, identity: 0.688

gaacgacgccgaagaggtgcaccgcgaacatc	CRISPR spacer
tttcgatgccgaaggggtgcaccgcgagttcg	Protospacer
   ***.*******.************.. .

353. spacer 2.44|482801|32|NC_018012|CRISPRCasFinder,CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 10, identity: 0.688

gaacgacgccgaagaggtgcaccgcgaacatc	CRISPR spacer
tttcgatgccgaaggggtgcaccgcgagttcg	Protospacer
   ***.*******.************.. .

354. spacer 2.44|482801|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gaacgacgccgaagaggtgcaccgcgaacatc	CRISPR spacer
tttcgatgccgaagcggtgcaccgcgagttcg	Protospacer
   ***.******* ************.. .

355. spacer 2.44|482801|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 10, identity: 0.688

gaacgacgccgaagaggtgcaccgcgaacatc	CRISPR spacer
tttcgatgccgaagcggtgcaccgcgagttcg	Protospacer
   ***.******* ************.. .

356. spacer 4.3|1161775|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP042264 (Litoreibacter sp. LN3S51 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

gtccaggtcggcactcatcgtgacggtgccga	CRISPR spacer
actgccatcggcattgatcgtgacggtgccgt	Protospacer
...   .******.* ***************

357. spacer 4.4|1161836|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP015065 (Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence) position: , mismatch: 10, identity: 0.688

agccgagattctcgccaatgacctggaagtcg	CRISPR spacer
catccgctttctcgccaatgacctgaaggtcc	Protospacer
 ..* .  *****************.*.***

358. spacer 4.4|1161836|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP013053 (Sinorhizobium americanum CCGM7 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.688

agccgagattctcgccaatgacctggaagtcg	CRISPR spacer
ggaaagcattctcgccaacgaccgggaagtga	Protospacer
.*  .. ***********.**** ****** .

359. spacer 4.6|1161958|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 10, identity: 0.688

acatcaagggcgtgctggcagcgacagacttg	CRISPR spacer
agttccagggcgtgatggcagcgacaacgcct	Protospacer
*  ** ******** ***********.  ..

360. spacer 4.6|1161958|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP022304 (Thalassococcus sp. S3 plasmid pS3A, complete sequence) position: , mismatch: 10, identity: 0.688

acatcaagggcgtgctggcagcgacagacttg	CRISPR spacer
ccatcaagggcgcgctggcggcgatgccgatc	Protospacer
 ***********.******.****..    *

361. spacer 4.9|1162141|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

tatacggccgctcccgagccggtcaaggtggc	CRISPR spacer
catacggccgctcccgagtccgtcggtcccgt	Protospacer
.*****************.* ***..  . *.

362. spacer 4.9|1162141|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 10, identity: 0.688

tatacggccgctcccgagccggtcaaggtggc	CRISPR spacer
gcttgcgccgctgccgagccggtccaggtcct	Protospacer
  *   ****** *********** ****  .

363. spacer 4.13|1162385|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP042264 (Litoreibacter sp. LN3S51 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

cgacaggcgcggaacaggctgatg---cgggtgtg	CRISPR spacer
tgacagccgcggaacaggcagatgaaccaaac---	Protospacer
.***** ************ ****   *....

364. spacer 4.15|1162507|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP013345 (Sphingopyxis macrogoltabida strain 203N plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cagggcggcgaattccttcttgaccatcatcg	CRISPR spacer
cagggcggcgacttccttctggatttgcgctt	Protospacer
*********** ******** **..  *...

365. spacer 4.18|1162690|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 10, identity: 0.688

ttcggtttcgcgcgcggcaattgcgcgatttc	CRISPR spacer
cacggtttcgcgcgcggcactggcggtctccg	Protospacer
. ***************** * ***   *..

366. spacer 4.18|1162690|32|NC_018012|CRISPRCasFinder,CRT matches to NZ_CP030828 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence) position: , mismatch: 10, identity: 0.688

ttcggtttcgcgcgcggcaattgcgcgatttc	CRISPR spacer
gtcggtctcgcgcgcggcaatcgccaaggcta	Protospacer
 *****.**************.**  .. .*

367. spacer 4.19|1162751|32|NC_018012|CRISPRCasFinder,CRT matches to NC_023283 (Streptomyces sp. FR1 plasmid pFRL3, complete sequence) position: , mismatch: 10, identity: 0.688

gccgtcccggtcgctccgggacggttttttta	CRISPR spacer
cccgtcccgggtgctccgggacgggcgtccgt	Protospacer
 ********* .************ . *..

368. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP053207 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ttgagccggccttcggcggcctgttcgatcac	Protospacer
 .  ** **.*****************. . *

369. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ttgagccggccttcggcggcctgttcgatgac	Protospacer
 .  ** **.*****************.   *

370. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP050100 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b3, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ttgagccggccttcggcggcctgttcgatcac	Protospacer
 .  ** **.*****************. . *

371. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to CP054930 (Streptomyces sp. NA00687 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
atgccgaggccgtcggcggcctgttcgggcgt	Protospacer
.. *  ***.* *****************. .

372. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP045329 (Labrenzia sp. THAF191b plasmid pTHAF191b_a, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cgcagcaggtcttcgacggccggttcgtcccg	Protospacer
  * ***********.***** *****  ..

373. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP025017 (Rhizobium leguminosarum strain Norway plasmid pRLN5, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ttgagccggccttcggcggcctgttcgatgac	Protospacer
 .  ** **.*****************.   *

374. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP049733 (Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ttgagccggccttcggcggcctgttcgatgac	Protospacer
 .  ** **.*****************.   *

375. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP045345 (Labrenzia sp. THAF187b plasmid pTHAF187b_a, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cgcagcaggtcttcgacggccggttcgtcccg	Protospacer
  * ***********.***** *****  ..

376. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP045335 (Labrenzia sp. THAF191a plasmid pTHAF191a_b, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cgcagcaggtcttcgacggccggttcgtcccg	Protospacer
  * ***********.***** *****  ..

377. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP053443 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eC, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ttgagccggccttcggcggcctgttcgatcac	Protospacer
 .  ** **.*****************. . *

378. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP018232 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ttgagccggccttcggcggcctgttcgatgac	Protospacer
 .  ** **.*****************.   *

379. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP016291 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed6, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ttgagccggccttcggcggcctgttcgatgac	Protospacer
 .  ** **.*****************.   *

380. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP048284 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ttgagccggccttcggcggcctgttcgatgac	Protospacer
 .  ** **.*****************.   *

381. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP041042 (Paracoccus sp. AK26 plasmid pAK4, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cggttcagctcgtcggcggcctgttcggcggc	Protospacer
   . *** ** ****************   *

382. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to NZ_CP041044 (Paracoccus sp. AK26 plasmid pAK2, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
cggttcagctcgtcggcggcctgttcggcggc	Protospacer
   . *** ** ****************   *

383. spacer 14.1|4773515|32|NC_018012|CRISPRCasFinder matches to KT281795 (Mycobacterium phage XFactor, complete genome) position: , mismatch: 10, identity: 0.688

gcccgcaggtcttcggcggcctgttcgggttc	CRISPR spacer
ccggtcacgttttcggcggcctgttcggacga	Protospacer
 *   ** **.*****************..

384. spacer 15.6|4879519|35|NC_018012|CRT,PILER-CR matches to NZ_CP010408 (Streptomyces vietnamensis strain GIMV4.0001 plasmid pSVL1, complete sequence) position: , mismatch: 10, identity: 0.714

tgcggtgaccttggcgatgttgccggtcagtgcgc	CRISPR spacer
gcaggtgacctcggcgatgtagccggtctccgggt	Protospacer
   ********.******** *******  .* *.

385. spacer 16.8|4881558|35|NC_018012|CRT,PILER-CR,CRISPRCasFinder matches to NC_023285 (Streptomyces sp. F8 plasmid pFRL5, complete sequence) position: , mismatch: 10, identity: 0.714

acctcgccgaccgcgtccacctcggcacctaccaa	CRISPR spacer
cgctcggcgaccgcgtccgcctcggcacccgggtc	Protospacer
  **** ***********.**********..

386. spacer 16.8|4881558|35|NC_018012|CRT,PILER-CR,CRISPRCasFinder matches to MH271305 (Gordonia phage Morrissey, complete genome) position: , mismatch: 10, identity: 0.714

acctcgccgaccgcgtccacctcggcacctaccaa	CRISPR spacer
gcctcaccgagcgcgtccacctcggcctgggtcca	Protospacer
.****.**** *************** .  ..* *

387. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040253 (Mycobacterium avium subsp. hominissuis strain 101115 plasmid pMARIA, complete sequence) position: , mismatch: 11, identity: 0.656

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
aggcgggcaccggtaaggtcgccgacccccac	Protospacer
. . *********..************

388. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040245 (Mycobacterium avium subsp. hominissuis strain 101034 plasmid pMARIA, complete sequence) position: , mismatch: 11, identity: 0.656

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
aggcgggcaccggtaaggtcgccgacccccac	Protospacer
. . *********..************

389. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN234186 (Arthrobacter phage Egad, complete genome) position: , mismatch: 11, identity: 0.656

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tgggaatcaccggcgagttcaccgaccagaaa	Protospacer
  .... ********** **.********* .

390. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN234180 (Arthrobacter phage Shiba, complete genome) position: , mismatch: 11, identity: 0.656

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tgggaatcaccggcgagttcaccgaccagaaa	Protospacer
  .... ********** **.********* .

391. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN234229 (Arthrobacter phage StarLord, complete genome) position: , mismatch: 11, identity: 0.656

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tgggaatcaccggcgagttcaccgaccagaaa	Protospacer
  .... ********** **.********* .

392. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN234175 (Arthrobacter phage Stayer, complete genome) position: , mismatch: 11, identity: 0.656

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tgggaatcaccggcgagttcaccgaccagaaa	Protospacer
  .... ********** **.********* .

393. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN234202 (Arthrobacter phage Salk, complete genome) position: , mismatch: 11, identity: 0.656

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tgggaatcaccggcgagttcaccgaccagaaa	Protospacer
  .... ********** **.********* .

394. spacer 2.7|480540|32|NC_018012|PILER-CR,CRISPRCasFinder,CRT matches to MN234210 (Arthrobacter phage Michelle, complete genome) position: , mismatch: 11, identity: 0.656

gcaagggcaccggcgaggtcgccgaccagatg	CRISPR spacer
tgggaatcaccggcgagttcaccgaccagaaa	Protospacer
  .... ********** **.********* .

395. spacer 2.17|481150|32|NC_018012|CRISPRCasFinder,CRT matches to CP007644 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence) position: , mismatch: 11, identity: 0.656

gtgccagccttgaccgcctcgagcacgtcagg	CRISPR spacer
agatgcgccttgacctcctcgagcgcgtcctc	Protospacer
. ..  ********* ********.****

396. spacer 4.21|1161780|33|NC_018012|PILER-CR matches to NZ_CP042264 (Litoreibacter sp. LN3S51 plasmid unnamed3, complete sequence) position: , mismatch: 11, identity: 0.667

gtccaggtcggcactcatcgtgacggtgccgag	CRISPR spacer
actgccatcggcattgatcgtgacggtgccgtt	Protospacer
...   .******.* ***************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

388536 : 437710

Bacillus_thuringiensis_phage(20.0%)

integrase,protease,tRNA,transposase

attL 399251:399265|attR 439462:439476

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041447215.1\|388536_389646_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_083845665.1\|389673_389916_+	protein phosphatase CheZ	NA	NA	NA	NA
WP_014776952.1\|389940_392121_+	chemotaxis protein CheA	NA	NA	NA	NA
WP_014776953.1\|392124_393198_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
WP_014776954.1\|393198_393942_+	flagellar motor protein	NA	NA	NA	NA
WP_014776955.1\|393951_394866_+	flagellar motor protein MotD	NA	NA	NA	NA
WP_014776956.1\|394900_395383_+	chemotaxis protein CheW	NA	NA	NA	NA
WP_157174337.1\|395458_395860_+	hypothetical protein	NA	NA	NA	NA
WP_014776957.1\|395875_396328_+	DUF2802 domain-containing protein	NA	NA	NA	NA
WP_014776958.1\|396336_396654_-	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	NA	NA	NA	NA
WP_041446772.1\|396650_398102_-	flagellar hook-length control protein FliK	NA	NA	NA	NA
WP_041446773.1\|398355_398721_+	hypothetical protein	NA	NA	NA	NA
WP_014776960.1\|398764_399523_-	flagellar brake protein	NA	NA	NA	NA
399251:399265	attL	NA	NA	NA	NA
WP_083845669.1\|399548_400106_-	flagellar protein FlgN	NA	NA	NA	NA
WP_157174339.1\|400111_400519_-	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA
WP_014776963.1\|400676_401423_-	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA
WP_014776964.1\|401854_402778_+	chemotaxis protein CheV	Q56AR1	Bacillus_thuringiensis_phage	1.4e-35	34.9
WP_014776965.1\|402834_403647_+	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_014776967.1\|404048_404456_+	flagellar basal body rod protein FlgB	NA	NA	NA	NA
WP_014776968.1\|404460_404880_+	flagellar basal body rod protein FlgC	NA	NA	NA	NA
WP_014776969.1\|404987_405665_+	flagellar hook assembly protein FlgD	NA	NA	NA	NA
WP_014776970.1\|405739_407194_+	flagellar hook protein FlgE	NA	NA	NA	NA
WP_014776971.1\|407276_408017_+	flagellar basal body rod protein FlgF	NA	NA	NA	NA
WP_014776972.1\|408214_409006_+	flagellar basal-body rod protein FlgG	NA	NA	NA	NA
WP_083845671.1\|409129_409942_+	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA
WP_014776974.1\|409980_411147_+	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA
WP_014776975.1\|411156_412233_+	flagellar assembly peptidoglycan hydrolase FlgJ	C0KIU7	Pseudomonas_phage	1.2e-14	39.4
WP_014776976.1\|412263_414693_+	flagellar hook-associated protein FlgK	NA	NA	NA	NA
WP_014776977.1\|414707_416009_+	flagellar hook-associated protein FlgL	NA	NA	NA	NA
WP_041447215.1\|416033_417143_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_014776978.1\|417211_417556_-	flagellar protein FliT	NA	NA	NA	NA
WP_083845810.1\|417600_418578_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_014776980.1\|418846_419113_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_041446775.1\|419172_420465_+	GTPase HflX	NA	NA	NA	NA
WP_014776982.1\|420888_422061_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_014776983.1\|422060_422942_+\|protease	protease modulator HflC	NA	NA	NA	NA
WP_014776984.1\|423348_426624_+	hybrid sensor histidine kinase/response regulator	A0A1V0SGX0	Hokovirus	4.8e-49	34.7
WP_014776985.1\|426745_426967_+	DUF2065 domain-containing protein	NA	NA	NA	NA
WP_014776986.1\|426966_428193_+	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA
WP_014776987.1\|428205_429501_+	adenylosuccinate synthase	A0A285PX35	Cedratvirus	6.6e-71	37.0
WP_014776988.1\|429568_430147_+	hypothetical protein	NA	NA	NA	NA
WP_014776989.1\|430232_431897_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.1e-29	32.1
WP_014776990.1\|431919_434292_+	DUF2868 domain-containing protein	NA	NA	NA	NA
WP_014776991.1\|434291_435728_+	GTPase/DUF3482 domain-containing protein	NA	NA	NA	NA
WP_041447215.1\|435816_436926_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_014776992.1\|437107_437710_-\|integrase	phage integrase N-terminal SAM-like domain-containing protein	NA	NA	NA	NA
439462:439476	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1288102 : 1299336

Alteromonas_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014777708.1\|1288102_1289521_+	PhoH family protein	K4F5S4	Cronobacter_phage	1.5e-71	34.6
WP_014777709.1\|1289617_1290502_-	cysteine synthase CysM	A0A1X9I5K7	Streptococcus_phage	1.1e-53	42.4
WP_014777710.1\|1290693_1291779_+	two-component system response regulator	W8CYM9	Bacillus_phage	3.1e-13	36.1
WP_014777711.1\|1291797_1293354_+	response regulator	A0A220YL79	Alteromonas_virus	1.4e-11	30.0
WP_014777712.1\|1293393_1293768_+	response regulator	A0A220YL79	Alteromonas_virus	3.0e-08	28.9
WP_169315564.1\|1293885_1299336_+	response regulator	A0A1V0SGX0	Hokovirus	1.1e-66	32.6

DBSCAN-SWA_3

1344374 : 1466610

Ectocarpus_siliculosus_virus(18.75%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014776674.1\|1344374_1345781_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_014777748.1\|1346065_1347307_+	radical SAM protein	NA	NA	NA	NA
WP_014777749.1\|1347519_1348569_+	hypothetical protein	NA	NA	NA	NA
WP_083845711.1\|1348802_1349180_+	hypothetical protein	NA	NA	NA	NA
WP_014777750.1\|1349176_1349983_+	hypothetical protein	NA	NA	NA	NA
WP_041447347.1\|1350100_1350556_+	hypothetical protein	NA	NA	NA	NA
WP_014777751.1\|1350897_1351494_+	hypothetical protein	NA	NA	NA	NA
WP_014777752.1\|1351995_1353618_+	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_014777753.1\|1353669_1354383_+\|transposase	transposase	NA	NA	NA	NA
WP_014777754.1\|1354440_1355418_-	hypothetical protein	NA	NA	NA	NA
WP_086013621.1\|1355567_1357208_-	diguanylate cyclase	G3MA91	Bacillus_virus	1.7e-23	35.7
WP_014777756.1\|1357934_1359095_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014777757.1\|1359351_1360038_+	DUF1566 domain-containing protein	NA	NA	NA	NA
WP_014777758.1\|1360120_1362721_-	ATP-dependent chaperone ClpB	A0A223W0B1	Agrobacterium_phage	6.5e-118	33.3
WP_014777759.1\|1362806_1363400_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_041447350.1\|1363519_1364437_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014777761.1\|1364794_1364995_+	hypothetical protein	NA	NA	NA	NA
WP_014777762.1\|1365279_1367490_+	EAL domain-containing protein	Q8QKV7	Ectocarpus_siliculosus_virus	6.3e-05	28.3
WP_014777763.1\|1367614_1371463_-	DUF3683 domain-containing protein	NA	NA	NA	NA
WP_014777764.1\|1371478_1373608_-	EAL domain-containing protein	A0A127AWB9	Bacillus_phage	9.4e-14	31.3
WP_157174372.1\|1373625_1374477_-	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA
WP_014777767.1\|1375007_1375982_+	TIGR01212 family radical SAM protein	NA	NA	NA	NA
WP_014777768.1\|1376002_1376998_+	U32 family peptidase	NA	NA	NA	NA
WP_014777769.1\|1377015_1377930_+	U32 family peptidase	NA	NA	NA	NA
WP_014777770.1\|1378002_1378398_+	hypothetical protein	NA	NA	NA	NA
WP_014777771.1\|1378504_1379848_-	outer membrane protein transport protein	NA	NA	NA	NA
WP_014777772.1\|1379961_1380924_-	alpha-E domain-containing protein	NA	NA	NA	NA
WP_014777773.1\|1381132_1382593_-	circularly permuted type 2 ATP-grasp protein	NA	NA	NA	NA
WP_014777774.1\|1382775_1383648_+	ATP phosphoribosyltransferase	NA	NA	NA	NA
WP_014777777.1\|1385027_1386404_-\|transposase	IS1182-like element ISTvi2 family transposase	NA	NA	NA	NA
WP_014777778.1\|1387797_1389465_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.1e-17	39.3
WP_014777779.1\|1389593_1390427_+	DUF599 domain-containing protein	NA	NA	NA	NA
WP_014777780.1\|1390824_1392387_+	glucan biosynthesis protein	NA	NA	NA	NA
WP_014777781.1\|1392371_1392923_+	hypothetical protein	NA	NA	NA	NA
WP_014777782.1\|1392919_1395031_+	glucans biosynthesis glucosyltransferase MdoH	NA	NA	NA	NA
WP_157174373.1\|1395073_1395232_+	hypothetical protein	NA	NA	NA	NA
WP_014777784.1\|1396275_1396950_+	septation protein A	NA	NA	NA	NA
WP_014777785.1\|1396951_1397251_+	YciI family protein	NA	NA	NA	NA
WP_014777786.1\|1397305_1398178_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_014777787.1\|1398417_1398639_+	hypothetical protein	NA	NA	NA	NA
WP_014777788.1\|1398738_1399413_-	NapC/NirT family cytochrome c	NA	NA	NA	NA
WP_014777789.1\|1399412_1400870_-	hypothetical protein	NA	NA	NA	NA
WP_014777790.1\|1401188_1402499_+	hypothetical protein	NA	NA	NA	NA
WP_014777791.1\|1402539_1402761_+	hypothetical protein	NA	NA	NA	NA
WP_014777792.1\|1402856_1403213_+	hypothetical protein	NA	NA	NA	NA
WP_041446854.1\|1403289_1403754_+	hypothetical protein	NA	NA	NA	NA
WP_041447215.1\|1403802_1404912_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_014777793.1\|1405145_1405334_+	hemin uptake protein HemP	NA	NA	NA	NA
WP_014777794.1\|1405391_1406891_+	DUF2325 domain-containing protein	NA	NA	NA	NA
WP_014777795.1\|1406984_1407383_-	cupin domain-containing protein	NA	NA	NA	NA
WP_014777362.1\|1408115_1408547_-\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA
WP_052314968.1\|1408998_1409352_+	NERD domain-containing protein	NA	NA	NA	NA
WP_157174375.1\|1409397_1409574_-	hypothetical protein	NA	NA	NA	NA
WP_014777797.1\|1410765_1411188_+\|transposase	transposase	NA	NA	NA	NA
WP_041447358.1\|1411254_1412565_+\|transposase	IS110 family transposase	Q9JMN8	Wolbachia_phage	3.7e-85	40.4
WP_157174376.1\|1412836_1413460_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	7.7e-33	40.8
WP_086013613.1\|1413440_1413578_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_157174377.1\|1413804_1414104_-	hypothetical protein	NA	NA	NA	NA
WP_014777800.1\|1414203_1415934_-	nickel-dependent hydrogenase large subunit	NA	NA	NA	NA
WP_014777801.1\|1415930_1417349_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_014777802.1\|1417345_1417996_-	respiratory nitrate reductase subunit gamma	NA	NA	NA	NA
WP_014777803.1\|1418053_1419118_-	hydrogenase small subunit	NA	NA	NA	NA
WP_014777804.1\|1419485_1419728_+	hypothetical protein	NA	NA	NA	NA
WP_014776993.1\|1419714_1420899_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_014776653.1\|1421564_1422287_-\|transposase	IS1 family transposase	NA	NA	NA	NA
WP_014777805.1\|1423347_1424886_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	2.9e-89	36.4
WP_157174378.1\|1425184_1426283_-	peptide chain release factor 2	NA	NA	NA	NA
WP_169315594.1\|1426394_1429634_-	EAL domain-containing protein	Q6XM27	Feldmannia_irregularis_virus	2.9e-06	28.1
WP_014777808.1\|1430675_1433108_-	response regulator	Q8QKV7	Ectocarpus_siliculosus_virus	9.0e-45	33.6
WP_014777809.1\|1433109_1433661_-	YfiR family protein	NA	NA	NA	NA
WP_157174379.1\|1433674_1435732_-	TonB-dependent receptor	NA	NA	NA	NA
WP_014777811.1\|1435735_1436623_-	HDOD domain-containing protein	NA	NA	NA	NA
WP_041447365.1\|1436857_1438339_+	PAS domain S-box protein	Q8QKV7	Ectocarpus_siliculosus_virus	2.2e-25	32.9
WP_014777813.1\|1438342_1439176_+	response regulator	NA	NA	NA	NA
WP_014777814.1\|1439180_1442513_+	EAL domain-containing protein	Q6XM27	Feldmannia_irregularis_virus	1.0e-06	27.4
WP_014777815.1\|1442534_1443419_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_014777816.1\|1443440_1447259_-	DUF1631 family protein	NA	NA	NA	NA
WP_014777817.1\|1447304_1449458_-	starch-binding protein	NA	NA	NA	NA
WP_014777818.1\|1449947_1450958_-\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	7.1e-20	27.4
WP_014777819.1\|1451221_1451629_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_014777820.1\|1451811_1452414_+	hypothetical protein	NA	NA	NA	NA
WP_014777821.1\|1452426_1453320_+	phosphatidylserine decarboxylase	NA	NA	NA	NA
WP_014777822.1\|1453336_1454323_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
WP_157174585.1\|1454508_1454808_+	diguanylate cyclase	NA	NA	NA	NA
WP_014777823.1\|1455039_1456104_+	HD-GYP domain-containing protein	NA	NA	NA	NA
WP_014777824.1\|1456254_1458360_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.4e-65	29.2
WP_014777825.1\|1458487_1458862_-	hypothetical protein	NA	NA	NA	NA
WP_014777826.1\|1458887_1459049_-	hypothetical protein	NA	NA	NA	NA
WP_014777827.1\|1459045_1459414_-	magnetosome protein MamC	NA	NA	NA	NA
WP_014777828.1\|1459410_1460202_-	hypothetical protein	NA	NA	NA	NA
WP_014777829.1\|1460382_1461432_+	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_157174381.1\|1461498_1463175_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_014777831.1\|1463158_1463839_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.7e-23	33.5
WP_014776775.1\|1464344_1464947_+	recombinase family protein	E5FFF9	Burkholderia_phage	1.1e-39	49.7
WP_014776774.1\|1464972_1466610_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1530158 : 1588647

Pandoravirus(16.67%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014777885.1\|1530158_1530950_+\|protease	proteasome-type protease	NA	NA	NA	NA
WP_014777886.1\|1531025_1532021_+	glutaminase A	NA	NA	NA	NA
WP_041447384.1\|1531929_1532880_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014777888.1\|1532997_1534818_+	assimilatory sulfite reductase (NADPH) flavoprotein subunit	NA	NA	NA	NA
WP_157174588.1\|1534814_1536500_+	assimilatory sulfite reductase (NADPH) hemoprotein subunit	NA	NA	NA	NA
WP_014777890.1\|1536492_1537224_+	phosphoadenylyl-sulfate reductase	NA	NA	NA	NA
WP_014777891.1\|1537375_1538710_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_014777892.1\|1539054_1540461_+	FAD-binding oxidoreductase	S4VRT3	Pandoravirus	1.9e-34	38.7
WP_014777893.1\|1540761_1541355_+	DUF3611 family protein	NA	NA	NA	NA
WP_014777894.1\|1541457_1543335_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA
WP_014777895.1\|1543334_1547132_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA
WP_014777896.1\|1547158_1549006_-	SufS family cysteine desulfurase	Q2XUY6	environmental_halophage	9.7e-92	41.4
WP_014777897.1\|1549168_1549516_+	hypothetical protein	NA	NA	NA	NA
WP_014777898.1\|1550198_1550753_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_014777899.1\|1550831_1551014_-	hypothetical protein	NA	NA	NA	NA
WP_014776993.1\|1551624_1552809_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_157174385.1\|1552915_1553263_+	hypothetical protein	NA	NA	NA	NA
WP_157174386.1\|1553308_1553818_+	DUF4365 domain-containing protein	NA	NA	NA	NA
WP_014777901.1\|1553814_1554933_+	hypothetical protein	NA	NA	NA	NA
WP_014777902.1\|1555101_1556064_+	2-hydroxyacid dehydrogenase	M1I4S0	Paramecium_bursaria_Chlorella_virus	2.5e-22	28.3
WP_014777903.1\|1556255_1556726_-	Hsp20 family protein	A0A1B1IW69	uncultured_Mediterranean_phage	2.1e-22	39.1
WP_014777905.1\|1557215_1557362_-	hypothetical protein	NA	NA	NA	NA
WP_041446867.1\|1557401_1557953_-	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_157174589.1\|1558475_1558676_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_014777906.1\|1558632_1558878_+	hypothetical protein	NA	NA	NA	NA
WP_014777907.1\|1559319_1559562_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_014777908.1\|1559577_1559994_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_014777909.1\|1560188_1561448_-	hypothetical protein	NA	NA	NA	NA
WP_014777910.1\|1561490_1561685_-	hypothetical protein	NA	NA	NA	NA
WP_014777911.1\|1561795_1561912_-	DUF1810 family protein	NA	NA	NA	NA
WP_157174387.1\|1561982_1563068_-	DUF2183 domain-containing protein	NA	NA	NA	NA
WP_014777914.1\|1563183_1563786_-	hypothetical protein	NA	NA	NA	NA
WP_014777915.1\|1563838_1564108_-	hypothetical protein	NA	NA	NA	NA
WP_014777916.1\|1564197_1566270_-	TonB-dependent receptor	NA	NA	NA	NA
WP_014777917.1\|1566276_1568184_-	response regulator	A0A1V0SGX0	Hokovirus	4.6e-20	25.4
WP_014777918.1\|1568167_1569100_-	hypothetical protein	NA	NA	NA	NA
WP_014777919.1\|1569164_1569545_-	hypothetical protein	NA	NA	NA	NA
WP_014777920.1\|1569565_1570261_-	response regulator transcription factor	NA	NA	NA	NA
WP_014777921.1\|1570539_1571271_+	phytochelatin synthase	NA	NA	NA	NA
WP_014777922.1\|1571323_1571761_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_014776701.1\|1571824_1572880_-\|transposase	transposase	NA	NA	NA	NA
WP_014777923.1\|1572854_1573181_-	hypothetical protein	NA	NA	NA	NA
WP_014777924.1\|1573450_1574179_+	DUF1845 domain-containing protein	NA	NA	NA	NA
WP_014776674.1\|1574476_1575883_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_014777926.1\|1575972_1576575_+	DUF2857 family protein	NA	NA	NA	NA
WP_014777927.1\|1576578_1576977_+	hypothetical protein	A0A1W6JQD5	Staphylococcus_phage	2.5e-05	30.9
WP_014777928.1\|1576957_1577977_+	conjugal transfer protein TraF	NA	NA	NA	NA
WP_014777929.1\|1577989_1579435_+	conjugal transfer protein TraH	NA	NA	NA	NA
WP_014777930.1\|1579488_1583361_+	conjugal transfer protein TraG N-terminal domain-containing protein	NA	NA	NA	NA
WP_041446869.1\|1583578_1583857_+	hypothetical protein	NA	NA	NA	NA
WP_174284505.1\|1584157_1584403_+	hypothetical protein	NA	NA	NA	NA
WP_174284506.1\|1584403_1584562_+	hypothetical protein	NA	NA	NA	NA
WP_041447215.1\|1585430_1586540_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_157174389.1\|1586452_1587487_-	metallophosphoesterase	NA	NA	NA	NA
WP_041447215.1\|1587537_1588647_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

1679854 : 1691616

Pseudomonas_phage(33.33%)

integrase

attL 1671067:1671082|attR 1685835:1685850

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1671067:1671082	attL	NA	NA	NA	NA
WP_052314980.1\|1679854_1680817_+\|integrase	site-specific integrase	A0A2H4IYX8	uncultured_Caudovirales_phage	1.4e-81	49.5
WP_052314981.1\|1680886_1681354_-	hypothetical protein	A0A1B0YZY0	Pseudomonas_phage	1.3e-13	31.7
WP_014777997.1\|1681350_1681839_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014777998.1\|1681783_1682176_-	hypothetical protein	A0A1B0YZY2	Pseudomonas_phage	4.4e-18	42.1
WP_014777999.1\|1682398_1683109_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_014778000.1\|1683105_1686486_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	2.3e-54	24.7
1685835:1685850	attR	NA	NA	NA	NA
WP_014778001.1\|1686632_1686896_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A088F8T3	Mycobacterium_phage	3.4e-14	48.8
WP_014778002.1\|1686892_1687099_-	hypothetical protein	NA	NA	NA	NA
WP_052314982.1\|1687119_1687668_-	hypothetical protein	NA	NA	NA	NA
WP_014778003.1\|1687736_1689050_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_157174590.1\|1689039_1691616_-	N-6 DNA methylase	A0A220A2U4	Liberibacter_phage	8.5e-78	37.0

DBSCAN-SWA_6

2183126 : 2248276

Serratia_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014776653.1\|2183126_2183849_-\|transposase	IS1 family transposase	NA	NA	NA	NA
WP_169315568.1\|2183872_2184628_-	hypothetical protein	NA	NA	NA	NA
WP_041447477.1\|2184810_2186313_-	chlorophyllide a reductase subunit Y	NA	NA	NA	NA
WP_014778424.1\|2186305_2187259_-	chlorophyllide a reductase iron protein subunit X	NA	NA	NA	NA
WP_014778425.1\|2187255_2188224_-	chlorophyll synthesis pathway protein BchC	NA	NA	NA	NA
WP_014778426.1\|2189033_2190149_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_014778427.1\|2190213_2191083_-	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_014778428.1\|2191200_2192697_+	phytoene desaturase	NA	NA	NA	NA
WP_041446922.1\|2192898_2193804_-	carotenoid 1,2-hydratase	NA	NA	NA	NA
WP_041446923.1\|2194233_2194707_-	DUF2269 family protein	NA	NA	NA	NA
WP_157174419.1\|2195057_2195816_+	NAD(P)H-binding protein	NA	NA	NA	NA
WP_014778432.1\|2195863_2196832_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_014778433.1\|2197006_2197876_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_014778434.1\|2197919_2198213_-	hypothetical protein	NA	NA	NA	NA
WP_014778435.1\|2198628_2199939_+	AarF/ABC1/UbiB kinase family protein	NA	NA	NA	NA
WP_014778436.1\|2200013_2201279_-	glycosyltransferase	NA	NA	NA	NA
WP_041446924.1\|2201377_2202457_-	phytoene/squalene synthase family protein	NA	NA	NA	NA
WP_041446925.1\|2202437_2203937_-	phytoene desaturase	NA	NA	NA	NA
WP_041446926.1\|2204284_2205250_-	ADP-ribosylglycohydrolase family protein	A0A1S6UB21	Serratia_phage	7.4e-59	43.5
WP_014778440.1\|2205239_2207540_-	exodeoxyribonuclease V subunit alpha	A0A1P8DII4	Virus_Rctr197k	4.9e-24	29.7
WP_014778441.1\|2207539_2211523_-	exodeoxyribonuclease V subunit beta	NA	NA	NA	NA
WP_014778442.1\|2211519_2215146_-	exodeoxyribonuclease V subunit gamma	NA	NA	NA	NA
WP_014778444.1\|2215957_2217319_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	3.2e-47	31.3
WP_014778445.1\|2217358_2218273_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_014778449.1\|2219129_2219543_-	FHA domain-containing protein	NA	NA	NA	NA
WP_014778450.1\|2219539_2220538_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_014778451.1\|2220534_2222130_-	FHA domain-containing protein	NA	NA	NA	NA
WP_014778452.1\|2222293_2223187_-	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA
WP_014778454.1\|2223531_2223837_-	nucleotidyltransferase	NA	NA	NA	NA
WP_086013615.1\|2224335_2225468_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_014778456.1\|2225692_2226037_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_014778457.1\|2226033_2226315_-	hypothetical protein	NA	NA	NA	NA
WP_014778458.1\|2226535_2227720_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_014778459.1\|2227859_2228783_-	FRG domain-containing protein	A0A1S6KZX9	Salmonella_phage	2.2e-23	29.5
WP_014778460.1\|2228854_2231023_-	serine/threonine protein kinase	A0A2K9L5D2	Tupanvirus	2.5e-06	26.4
WP_014778461.1\|2231347_2231962_-	FHA domain-containing protein	NA	NA	NA	NA
WP_083845819.1\|2232139_2233249_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_041446932.1\|2234068_2234830_-	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA
WP_014778466.1\|2234808_2235000_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_157174604.1\|2235380_2235761_+	hypothetical protein	NA	NA	NA	NA
WP_014778468.1\|2235770_2236973_+	TraB/GumN family protein	NA	NA	NA	NA
WP_041447215.1\|2237499_2238609_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_014778469.1\|2238707_2239655_-	hypothetical protein	NA	NA	NA	NA
WP_014778470.1\|2239721_2240492_+	hypothetical protein	NA	NA	NA	NA
WP_014778471.1\|2240693_2242349_-	BatD family protein	NA	NA	NA	NA
WP_014778472.1\|2242342_2244025_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_041447488.1\|2244114_2245179_-	VWA domain-containing protein	NA	NA	NA	NA
WP_014778474.1\|2245183_2246224_-	VWA domain-containing protein	NA	NA	NA	NA
WP_052315001.1\|2246216_2246774_-	DUF4381 domain-containing protein	NA	NA	NA	NA
WP_014778476.1\|2246775_2247693_-	DUF58 domain-containing protein	NA	NA	NA	NA
WP_014778477.1\|2247745_2248276_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_7

2373676 : 2430042

Tupanvirus(28.57%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014778573.1\|2373676_2374786_+\|protease	cysteine protease StiP family protein	NA	NA	NA	NA
WP_014778574.1\|2374778_2375648_+	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_041447215.1\|2375780_2376890_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_014778575.1\|2376896_2377307_-	DUF29 domain-containing protein	A0A0K2QQ08	Ralstonia_phage	6.8e-22	44.9
WP_014778576.1\|2377329_2378364_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	A0A2K9L0I7	Tupanvirus	1.2e-70	43.3
WP_014778577.1\|2378366_2379653_-	nucleotide sugar dehydrogenase	NA	NA	NA	NA
WP_014778578.1\|2380157_2380595_-	peptidoglycan-binding protein LysM	A0A0A7RVP5	Clostridium_phage	6.6e-07	42.6
WP_014778579.1\|2380654_2380954_-	hypothetical protein	NA	NA	NA	NA
WP_014778580.1\|2381077_2382517_-	hypothetical protein	NA	NA	NA	NA
WP_014778581.1\|2382527_2383457_-	hypothetical protein	NA	NA	NA	NA
WP_014778582.1\|2383453_2384698_-	hypothetical protein	G4KKC9	Yersinia_phage	2.8e-74	41.1
WP_014778583.1\|2384789_2385035_-	BolA/IbaG family iron-sulfur metabolism protein	NA	NA	NA	NA
WP_014778584.1\|2385084_2385444_-	hypothetical protein	NA	NA	NA	NA
WP_014778585.1\|2385657_2387238_-	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	6.1e-10	32.1
WP_157174422.1\|2387329_2389006_-	aspartate aminotransferase family protein	NA	NA	NA	NA
WP_014778587.1\|2389083_2390091_-	S49 family peptidase	NA	NA	NA	NA
WP_014778588.1\|2390385_2391045_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_014778589.1\|2391041_2392088_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_014778590.1\|2392680_2395791_+	ribonuclease E	NA	NA	NA	NA
WP_014778591.1\|2395886_2397182_+	sulfotransferase	NA	NA	NA	NA
WP_014778592.1\|2397175_2398339_+	glycosyltransferase	NA	NA	NA	NA
WP_014778593.1\|2398325_2399069_+	DUF2334 domain-containing protein	NA	NA	NA	NA
WP_041447505.1\|2399065_2399554_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
WP_014778596.1\|2400320_2400518_+	hypothetical protein	NA	NA	NA	NA
WP_014776653.1\|2400537_2401260_-\|transposase	IS1 family transposase	NA	NA	NA	NA
WP_083845737.1\|2401296_2402532_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_014778598.1\|2402821_2404603_-	thiosulfohydrolase SoxB	NA	NA	NA	NA
WP_014778599.1\|2404935_2405379_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_157174610.1\|2405387_2405963_+	GspH/FimT family pseudopilin	NA	NA	NA	NA
WP_014778601.1\|2405950_2407048_+	hypothetical protein	NA	NA	NA	NA
WP_014778602.1\|2407068_2408247_+	hypothetical protein	NA	NA	NA	NA
WP_014778603.1\|2408270_2408726_+	Tfp pilus assembly protein PilV	NA	NA	NA	NA
WP_014778604.1\|2408765_2408996_+	hypothetical protein	NA	NA	NA	NA
WP_014778605.1\|2409182_2411345_-	YgiQ family radical SAM protein	M1QSD9	Pseudomonas_phage	1.5e-104	72.5
WP_014778606.1\|2411533_2412292_+	flagellar motor protein PomA	NA	NA	NA	NA
WP_014778607.1\|2412322_2413183_+	OmpA family protein	NA	NA	NA	NA
WP_014778608.1\|2413197_2413761_+	PilZ domain-containing protein	NA	NA	NA	NA
WP_014778609.1\|2413775_2414087_-	hypothetical protein	NA	NA	NA	NA
WP_014778610.1\|2414164_2415250_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_014778611.1\|2415273_2416011_-	hypothetical protein	NA	NA	NA	NA
WP_014778612.1\|2416394_2417876_-	RimK family alpha-L-glutamate ligase	NA	NA	NA	NA
WP_174284519.1\|2417868_2418942_-	peptidase C39 family protein	NA	NA	NA	NA
WP_014778614.1\|2419105_2419867_+	DUF3782 domain-containing protein	NA	NA	NA	NA
WP_014778615.1\|2419896_2421051_+	acetylornithine deacetylase	NA	NA	NA	NA
WP_014778616.1\|2421213_2422155_+	neutral zinc metallopeptidase	A0A1I9SA48	Rhodococcus_phage	4.7e-34	36.4
WP_014778617.1\|2422204_2423659_-	cardiolipin synthase	NA	NA	NA	NA
WP_014778618.1\|2423666_2424023_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA
WP_014778619.1\|2424194_2425712_-	argininosuccinate lyase	NA	NA	NA	NA
WP_014778620.1\|2425986_2426754_+	response regulator transcription factor	NA	NA	NA	NA
WP_014778621.1\|2426745_2427603_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_014778622.1\|2428001_2428817_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_041447215.1\|2428932_2430042_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

2644021 : 2711049

Escherichia_phage(18.18%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014778806.1\|2644021_2644738_+\|transposase	transposase	NA	NA	NA	NA
WP_014778807.1\|2644749_2645151_+	cupin domain-containing protein	NA	NA	NA	NA
WP_014778808.1\|2645317_2645920_+	flavin reductase family protein	NA	NA	NA	NA
WP_014778809.1\|2646175_2647624_+	pyruvate kinase	NA	NA	NA	NA
WP_041446965.1\|2648193_2648688_+	BrxE family protein	NA	NA	NA	NA
WP_014778812.1\|2649589_2650120_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.2e-28	42.9
WP_157174430.1\|2650118_2650337_+	hypothetical protein	NA	NA	NA	NA
WP_157174431.1\|2650616_2651315_-\|transposase	IS21 family transposase	A0A059NT83	Lactococcus_phage	2.5e-08	29.4
WP_014778813.1\|2651430_2651943_+\|transposase	transposase	NA	NA	NA	NA
WP_041446968.1\|2652999_2654427_-	NAD(P)H-binding protein	NA	NA	NA	NA
WP_014778815.1\|2654447_2655137_-	uracil-DNA glycosylase	NA	NA	NA	NA
WP_014778816.1\|2655141_2655723_-	DinB family protein	NA	NA	NA	NA
WP_014778817.1\|2655719_2657393_-\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	1.2e-202	61.8
WP_014778818.1\|2657680_2657995_+	DUF1840 domain-containing protein	NA	NA	NA	NA
WP_014778819.1\|2658114_2659977_+	hypothetical protein	NA	NA	NA	NA
WP_014778820.1\|2660501_2662085_-	penicillin-binding protein 2	NA	NA	NA	NA
WP_014778821.1\|2662081_2663140_-	o-succinylbenzoate synthase	NA	NA	NA	NA
WP_014778822.1\|2663136_2664066_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_052315018.1\|2664196_2665057_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
WP_014778824.1\|2665358_2667182_+	AAA family ATPase	NA	NA	NA	NA
WP_014778825.1\|2667178_2668075_+	general secretion pathway protein GspB	NA	NA	NA	NA
WP_014778826.1\|2668167_2669610_+	magnesium transporter	NA	NA	NA	NA
WP_169315571.1\|2669764_2673676_+	PAS domain S-box protein	NA	NA	NA	NA
WP_014778828.1\|2673672_2674344_+	response regulator	NA	NA	NA	NA
WP_052315019.1\|2674506_2676180_+	CZB domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	3.8e-18	41.6
WP_014778830.1\|2676176_2678255_+	EAL domain-containing protein	G3MA91	Bacillus_virus	5.5e-27	38.7
WP_014778831.1\|2678593_2679196_+	hypothetical protein	NA	NA	NA	NA
WP_014778832.1\|2679332_2679572_+	hypothetical protein	NA	NA	NA	NA
WP_014778833.1\|2679638_2681561_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	M4QMW8	Micromonas_pusilla_virus	2.8e-118	42.4
WP_014778835.1\|2682279_2683728_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	1.6e-28	33.6
WP_014778836.1\|2684050_2685358_+	DUF3422 domain-containing protein	NA	NA	NA	NA
WP_014778837.1\|2685384_2685942_-\|protease	retroviral-like aspartic protease family protein	NA	NA	NA	NA
WP_014778838.1\|2685938_2688446_-	EAL domain-containing protein	G3MA91	Bacillus_virus	6.7e-19	33.3
WP_014778839.1\|2688451_2689708_-	HD-GYP domain-containing protein	NA	NA	NA	NA
WP_014778840.1\|2689991_2690534_-\|protease	TIGR02281 family clan AA aspartic protease	NA	NA	NA	NA
WP_014778841.1\|2690793_2692938_-	hypothetical protein	NA	NA	NA	NA
WP_014778842.1\|2692997_2698673_-	hypothetical protein	NA	NA	NA	NA
WP_014778843.1\|2698715_2699390_-	PspA/IM30 family protein	NA	NA	NA	NA
WP_157174621.1\|2699541_2700423_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_014778845.1\|2700691_2701558_+	c-type cytochrome	NA	NA	NA	NA
WP_052315020.1\|2701527_2703369_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.1e-24	39.2
WP_014778847.1\|2703520_2704129_-	hypothetical protein	NA	NA	NA	NA
WP_014778848.1\|2704125_2704476_-	S24 family peptidase	NA	NA	NA	NA
WP_014778849.1\|2704526_2705399_-	HDOD domain-containing protein	A0A1C3NFB0	Phage_NCTB	5.9e-07	25.4
WP_157174622.1\|2705545_2707375_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	3.1e-42	27.5
WP_014778851.1\|2707582_2709208_+	histidine kinase	NA	NA	NA	NA
WP_014778852.1\|2709195_2709852_+	response regulator transcription factor	NA	NA	NA	NA
WP_041447215.1\|2709939_2711049_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

2855483 : 2929561

Hokovirus(18.18%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014778980.1\|2855483_2857358_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_014778981.1\|2857480_2858425_+	AAA family ATPase	NA	NA	NA	NA
WP_014778982.1\|2858442_2860881_+	response regulator	A0A1V0SGX0	Hokovirus	4.8e-38	31.1
WP_014778983.1\|2860945_2861662_-	hypothetical protein	NA	NA	NA	NA
WP_014778984.1\|2861860_2863090_+	succinyldiaminopimelate transaminase	NA	NA	NA	NA
WP_157174625.1\|2863290_2863863_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014778986.1\|2863892_2864714_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
WP_014778987.1\|2864738_2865083_+	ArsC family reductase	NA	NA	NA	NA
WP_014778988.1\|2865082_2866219_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
WP_041447215.1\|2866377_2867487_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_157174442.1\|2867711_2868365_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_014778990.1\|2869291_2870203_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_014778991.1\|2870322_2870958_+	SIS domain-containing protein	NA	NA	NA	NA
WP_014778992.1\|2870933_2871695_-	glutaminyl-peptide cyclotransferase	NA	NA	NA	NA
WP_169315573.1\|2871823_2872423_+	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	1.8e-23	37.0
WP_014778994.1\|2872460_2874470_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA
WP_014778995.1\|2874621_2875806_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_014778996.1\|2876230_2876788_+	LEA type 2 family protein	NA	NA	NA	NA
WP_014778997.1\|2876938_2877874_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.2e-17	28.0
WP_041446979.1\|2877882_2878659_+	ABC transporter permease	NA	NA	NA	NA
WP_014778999.1\|2878784_2879228_-	AAA family ATPase	NA	NA	NA	NA
WP_014779000.1\|2879287_2879875_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_052315131.1\|2879948_2881709_-	metallophosphoesterase	NA	NA	NA	NA
WP_014779002.1\|2882176_2882758_+	TMEM165/GDT1 family protein	NA	NA	NA	NA
WP_014779003.1\|2882856_2883948_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_014779004.1\|2884027_2885518_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	1.5e-47	28.2
WP_014779005.1\|2885803_2886616_+	inositol monophosphatase family protein	NA	NA	NA	NA
WP_014779006.1\|2886737_2887181_+	sel1 repeat family protein	NA	NA	NA	NA
WP_014779007.1\|2887212_2888340_-	glycosyltransferase	NA	NA	NA	NA
WP_014779008.1\|2889092_2889356_-	hypothetical protein	NA	NA	NA	NA
WP_157174443.1\|2889569_2890268_+\|transposase	IS21 family transposase	A0A059NT83	Lactococcus_phage	2.5e-08	29.4
WP_157174430.1\|2890547_2890766_-	hypothetical protein	NA	NA	NA	NA
WP_014778812.1\|2890764_2891295_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.2e-28	42.9
WP_041446981.1\|2891336_2891666_-	hypothetical protein	NA	NA	NA	NA
WP_014779009.1\|2891923_2892346_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_014779010.1\|2892394_2892613_+	hypothetical protein	NA	NA	NA	NA
WP_169315574.1\|2893098_2893590_-	hypothetical protein	NA	NA	NA	NA
WP_157174444.1\|2893691_2894210_-	hypothetical protein	NA	NA	NA	NA
WP_041446983.1\|2894384_2895074_-	hypothetical protein	NA	NA	NA	NA
WP_086013615.1\|2895189_2896321_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_014777014.1\|2897324_2898380_+\|transposase	transposase	NA	NA	NA	NA
WP_014779013.1\|2898417_2900271_-	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	3.9e-24	33.2
WP_169315575.1\|2900267_2900513_-	hypothetical protein	NA	NA	NA	NA
WP_014777797.1\|2907493_2907916_+\|transposase	transposase	NA	NA	NA	NA
WP_041447358.1\|2907982_2909293_+\|transposase	IS110 family transposase	Q9JMN8	Wolbachia_phage	3.7e-85	40.4
WP_157174376.1\|2909564_2910188_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	7.7e-33	40.8
WP_086013613.1\|2910168_2910306_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_041447215.1\|2911037_2912147_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_014779015.1\|2912940_2913300_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_014779016.1\|2913328_2914444_+	hypothetical protein	NA	NA	NA	NA
WP_157174445.1\|2914488_2914989_+	hypothetical protein	A4JWJ9	Burkholderia_virus	1.6e-28	52.7
WP_014779018.1\|2915201_2915756_+	transcriptional regulator	A0A2P9JZH7	Alteromonadaceae_phage	1.2e-05	30.0
WP_076611785.1\|2916290_2917604_+\|transposase	ISKra4-like element ISTvi1 family transposase	NA	NA	NA	NA
WP_014777014.1\|2917912_2918968_-\|transposase	transposase	NA	NA	NA	NA
WP_014779021.1\|2919190_2920411_+	argininosuccinate synthase	NA	NA	NA	NA
WP_014779022.1\|2920632_2921997_-	DNA repair protein RadA	NA	NA	NA	NA
WP_014779023.1\|2921986_2922457_-	SRPBCC family protein	NA	NA	NA	NA
WP_014779024.1\|2922464_2923214_-	molecular chaperone DnaJ	NA	NA	NA	NA
WP_014779025.1\|2923221_2923941_-	hypothetical protein	NA	NA	NA	NA
WP_014779026.1\|2924316_2924619_+	PilZ domain-containing protein	NA	NA	NA	NA
WP_014779027.1\|2924726_2925773_-	HDOD domain-containing protein	NA	NA	NA	NA
WP_014779028.1\|2926411_2928088_+	hypothetical protein	NA	NA	NA	NA
WP_041447215.1\|2928451_2929561_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

3171193 : 3223245

Moraxella_phage(14.29%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041447215.1\|3171193_3172303_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_157174457.1\|3172362_3172641_+	hypothetical protein	NA	NA	NA	NA
WP_014779225.1\|3172630_3173359_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_014777777.1\|3174733_3176110_-\|transposase	IS1182-like element ISTvi2 family transposase	NA	NA	NA	NA
WP_157174458.1\|3178163_3178391_+	hypothetical protein	NA	NA	NA	NA
WP_014779227.1\|3178911_3181317_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.4e-138	38.3
WP_014779228.1\|3181434_3181599_-	hypothetical protein	NA	NA	NA	NA
WP_014777014.1\|3181663_3182719_+\|transposase	transposase	NA	NA	NA	NA
WP_014779229.1\|3182886_3183951_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA
WP_014779230.1\|3184007_3184817_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_014779231.1\|3184813_3185464_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	8.9e-08	26.8
WP_083845754.1\|3185463_3186243_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_014779235.1\|3187322_3188594_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
WP_014779236.1\|3188721_3190998_+	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA
WP_052315034.1\|3190984_3191410_+	DUF2288 domain-containing protein	NA	NA	NA	NA
WP_014779237.1\|3191322_3191799_+	YaiI/YqxD family protein	NA	NA	NA	NA
WP_014779238.1\|3191830_3192403_+	NnrU family protein	NA	NA	NA	NA
WP_014779239.1\|3192457_3192907_+	molybdopterin synthase catalytic subunit MoaE	NA	NA	NA	NA
WP_014779240.1\|3193033_3195439_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	4.1e-106	33.1
WP_041447011.1\|3196306_3196603_+\|transposase	transposase	NA	NA	NA	NA
WP_014779242.1\|3197176_3197695_-	NADH-quinone oxidoreductase subunit B family protein	NA	NA	NA	NA
WP_041447617.1\|3197694_3199335_-	NADH-quinone oxidoreductase subunit C	NA	NA	NA	NA
WP_014779244.1\|3199442_3200915_-	hydrogenase 4 subunit F	NA	NA	NA	NA
WP_014779245.1\|3200911_3201634_-	formate hydrogenlyase	NA	NA	NA	NA
WP_041447618.1\|3201630_3202581_-	NADH-quinone oxidoreductase subunit H	NA	NA	NA	NA
WP_014779247.1\|3202595_3204608_-	hydrogenase 4 subunit B	NA	NA	NA	NA
WP_174284511.1\|3204629_3204923_-	ArsR family transcriptional regulator	NA	NA	NA	NA
WP_014779249.1\|3204923_3205805_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_014779250.1\|3205938_3206145_+	hypothetical protein	NA	NA	NA	NA
WP_014779251.1\|3206230_3206833_-	HAD-IB family hydrolase	NA	NA	NA	NA
WP_014779252.1\|3206921_3208421_-	kinase	NA	NA	NA	NA
WP_157174634.1\|3208491_3210150_-	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA
WP_014779254.1\|3210157_3211210_-	VWA domain-containing protein	NA	NA	NA	NA
WP_041447619.1\|3211319_3211955_-	VWA domain-containing protein	NA	NA	NA	NA
WP_014779256.1\|3212225_3213248_-	TerC family protein	K7QKE8	Escherichia_phage	8.6e-82	51.7
WP_014779257.1\|3213342_3213876_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A1B1IUF0	uncultured_Mediterranean_phage	1.1e-48	55.6
WP_014779258.1\|3213898_3214855_-	CHAD domain-containing protein	NA	NA	NA	NA
WP_083845756.1\|3216928_3217555_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_052315037.1\|3217570_3217870_-	hypothetical protein	NA	NA	NA	NA
WP_052315038.1\|3217915_3218227_-	hypothetical protein	NA	NA	NA	NA
WP_157174459.1\|3218278_3218488_-	hypothetical protein	NA	NA	NA	NA
WP_041447013.1\|3218474_3219401_-	hypothetical protein	NA	NA	NA	NA
WP_014779260.1\|3219719_3220550_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	E4ZFQ0	Streptococcus_phage	2.9e-11	26.1
WP_014779261.1\|3220911_3221883_-	transaldolase	M1UH25	Prochlorococcus_phage	1.2e-08	30.7
WP_041447215.1\|3222135_3223245_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_11

3300096 : 3363891

uncultured_Caudovirales_phage(20.0%)

integrase,transposase

attL 3291799:3291822|attR 3323627:3323650

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3291799:3291822	attL	NA	NA	NA	NA
WP_083845761.1\|3300096_3300888_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_169315577.1\|3302132_3302408_-	hypothetical protein	NA	NA	NA	NA
WP_083845762.1\|3303013_3303823_-	hypothetical protein	A0A2H4J162	uncultured_Caudovirales_phage	9.0e-34	37.3
WP_014776993.1\|3303911_3305096_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_157174469.1\|3305041_3305812_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_041447215.1\|3307511_3308621_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_014779317.1\|3309595_3309736_-	4Fe-4S binding protein	NA	NA	NA	NA
WP_014776674.1\|3310514_3311921_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_014779319.1\|3312055_3312634_+	hypothetical protein	NA	NA	NA	NA
WP_014779320.1\|3312623_3313562_+	hypothetical protein	NA	NA	NA	NA
WP_014779321.1\|3313798_3314260_-	DUF1810 domain-containing protein	A0A2H4UVK5	Bodo_saltans_virus	1.1e-12	38.7
WP_014779322.1\|3314284_3314680_-	lactoylglutathione lyase	NA	NA	NA	NA
WP_014779323.1\|3314749_3315376_-	LysE family transporter	NA	NA	NA	NA
WP_014779324.1\|3315372_3316149_-	class D beta-lactamase	NA	NA	NA	NA
WP_014779325.1\|3316297_3316504_-	hypothetical protein	NA	NA	NA	NA
WP_014779326.1\|3316874_3317675_+	zinc-dependent peptidase	NA	NA	NA	NA
WP_041447033.1\|3317794_3318010_+	hypothetical protein	NA	NA	NA	NA
WP_014779327.1\|3318074_3318794_+	pirin family protein	NA	NA	NA	NA
WP_014779328.1\|3318790_3319585_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_041447215.1\|3320010_3321120_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_014779329.1\|3321136_3321346_-	hypothetical protein	NA	NA	NA	NA
WP_157174470.1\|3321735_3323517_+	hypothetical protein	NA	NA	NA	NA
WP_157174471.1\|3323704_3324922_+	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
3323627:3323650	attR	NA	NA	NA	NA
WP_014779332.1\|3325069_3326839_+	SLC13 family permease	Q6A201	Oenococcus_phage	3.5e-06	26.2
WP_014779333.1\|3327017_3328109_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_014779334.1\|3328174_3329263_+	EAL domain-containing protein	NA	NA	NA	NA
WP_014779335.1\|3329338_3329902_+	dCTP deaminase	S5VM63	Pseudomonas_phage	6.2e-74	72.7
WP_014779336.1\|3329982_3330762_+	queuosine precursor transporter	A0A2H4J2N7	uncultured_Caudovirales_phage	6.9e-07	25.5
WP_014779337.1\|3330850_3331087_+	hypothetical protein	NA	NA	NA	NA
WP_014779338.1\|3331083_3332271_-	glycosyltransferase	NA	NA	NA	NA
WP_014779339.1\|3332354_3332759_+	hypothetical protein	NA	NA	NA	NA
WP_014779340.1\|3332898_3333939_+	PstS family phosphate ABC transporter substrate-binding protein	A0A1B1IWY0	uncultured_Mediterranean_phage	2.6e-110	57.4
WP_014779341.1\|3334039_3335431_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_014779342.1\|3335423_3336737_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_041447034.1\|3336790_3337654_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-18	32.0
WP_014779344.1\|3337653_3338412_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_014779346.1\|3338878_3339166_+	ferritin	NA	NA	NA	NA
WP_014779347.1\|3339177_3339909_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_014779348.1\|3340293_3343062_+	pyruvate, phosphate dikinase	H8YJB7	Vibrio_phage	1.4e-81	37.8
WP_014779349.1\|3343218_3344622_+	hypothetical protein	NA	NA	NA	NA
WP_014779350.1\|3344632_3345895_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_014779351.1\|3345897_3346986_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_014779352.1\|3347239_3348031_+	hypothetical protein	NA	NA	NA	NA
WP_014779353.1\|3348426_3348585_-	heme exporter protein CcmD	NA	NA	NA	NA
WP_014779354.1\|3348581_3349340_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA
WP_157174472.1\|3349418_3349688_-	DUF2442 domain-containing protein	NA	NA	NA	NA
WP_014779356.1\|3349671_3349905_-	DUF4160 domain-containing protein	NA	NA	NA	NA
WP_014779357.1\|3349941_3350613_-	heme exporter protein CcmB	NA	NA	NA	NA
WP_014779358.1\|3350618_3351236_-	cytochrome c biogenesis heme-transporting ATPase CcmA	G3M9Y6	Bacillus_virus	1.9e-12	26.3
WP_014779359.1\|3351558_3352917_-	c-type cytochrome biogenesis protein CcmI	NA	NA	NA	NA
WP_014779360.1\|3352923_3353415_-	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA
WP_014779361.1\|3353499_3354039_-	DsbE family thiol:disulfide interchange protein	NA	NA	NA	NA
WP_014779362.1\|3354051_3356037_-	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA
WP_014779363.1\|3356036_3356510_-	cytochrome c maturation protein CcmE	NA	NA	NA	NA
WP_014779364.1\|3356721_3357432_+	SOS response-associated peptidase	V9IQW7	Stenotrophomonas_phage	7.2e-35	40.3
WP_014779365.1\|3357577_3358045_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_014779366.1\|3358079_3360479_-	carbamoyltransferase HypF	NA	NA	NA	NA
WP_014779367.1\|3360894_3361437_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_157174635.1\|3361631_3362714_+	AmmeMemoRadiSam system radical SAM enzyme	NA	NA	NA	NA
WP_041447215.1\|3362781_3363891_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_12

3753444 : 3820280

Bacillus_virus(14.29%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014779708.1\|3753444_3754878_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_014779709.1\|3755505_3756246_-	beta-ketoacyl-ACP reductase	NA	NA	NA	NA
WP_014779711.1\|3756380_3756746_-	phasin family protein	NA	NA	NA	NA
WP_014779712.1\|3756849_3757323_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA
WP_014779713.1\|3757485_3758670_-	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA
WP_014779714.1\|3758984_3760043_+	class III poly(R)-hydroxyalkanoic acid synthase subunit PhaE	NA	NA	NA	NA
WP_014779715.1\|3760100_3761168_+	class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC	NA	NA	NA	NA
WP_014779716.1\|3761225_3761387_-	hypothetical protein	NA	NA	NA	NA
WP_014779717.1\|3762053_3762989_+	AEC family transporter	NA	NA	NA	NA
WP_041447215.1\|3763623_3764733_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_014779718.1\|3764762_3765422_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_014779719.1\|3765421_3765817_+	biopolymer transporter ExbD	NA	NA	NA	NA
WP_014779720.1\|3765813_3766650_+	energy transducer TonB	NA	NA	NA	NA
WP_014779721.1\|3766714_3767761_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_041447063.1\|3767803_3769756_+	TonB-dependent receptor	NA	NA	NA	NA
WP_041447064.1\|3769801_3770053_+	TonB-dependent receptor	NA	NA	NA	NA
WP_014779722.1\|3770069_3770777_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014779723.1\|3770776_3771442_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_014779724.1\|3771441_3772584_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.3e-17	32.0
WP_157174653.1\|3772580_3773195_-	hypothetical protein	NA	NA	NA	NA
WP_157174487.1\|3773229_3775335_-	EAL domain-containing protein	NA	NA	NA	NA
WP_014779727.1\|3775884_3777777_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
WP_169315581.1\|3777830_3779000_+	DUF3696 domain-containing protein	NA	NA	NA	NA
WP_157174488.1\|3779172_3779988_+	hypothetical protein	NA	NA	NA	NA
WP_014779730.1\|3780001_3781687_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_157174489.1\|3781708_3781861_+	hypothetical protein	NA	NA	NA	NA
WP_014779731.1\|3782092_3783214_+	cobalamin B12-binding domain-containing protein	NA	NA	NA	NA
WP_014779732.1\|3783210_3784167_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	4.5e-16	35.6
WP_014779733.1\|3784409_3786914_-	glycogen/starch/alpha-glucan phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	1.7e-14	40.2
WP_014779734.1\|3787061_3787355_-	hypothetical protein	NA	NA	NA	NA
WP_157174490.1\|3787368_3787908_-	DUF2939 domain-containing protein	NA	NA	NA	NA
WP_014779736.1\|3787924_3789844_-	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	4.1e-69	31.8
WP_014779737.1\|3790120_3791647_-	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA
WP_014779738.1\|3791663_3791930_-	accessory factor UbiK family protein	NA	NA	NA	NA
WP_014779739.1\|3792312_3793041_+	hypothetical protein	NA	NA	NA	NA
WP_014779740.1\|3793117_3793456_+	P-II family nitrogen regulator	NA	NA	NA	NA
WP_086013623.1\|3793488_3794820_+	ammonium transporter	NA	NA	NA	NA
WP_014779742.1\|3795020_3795893_-	polyamine aminopropyltransferase	NA	NA	NA	NA
WP_014779743.1\|3796143_3797331_-	fatty acid desaturase	A9YX10	Burkholderia_phage	1.6e-07	31.7
WP_014779744.1\|3797448_3799896_-	penicillin acylase family protein	NA	NA	NA	NA
WP_014779745.1\|3799991_3800933_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA
WP_157174491.1\|3800952_3801171_+	hypothetical protein	NA	NA	NA	NA
WP_014779747.1\|3801374_3802415_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA
WP_014779748.1\|3802746_3803430_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_014779749.1\|3803644_3804319_+	phosphoglycolate phosphatase	NA	NA	NA	NA
WP_014779750.1\|3804438_3805938_+	anthranilate synthase component I	A0A0B5J984	Pandoravirus	5.2e-43	34.9
WP_052315052.1\|3806035_3806569_-	hypothetical protein	NA	NA	NA	NA
WP_014776653.1\|3806597_3807320_-\|transposase	IS1 family transposase	NA	NA	NA	NA
WP_083845773.1\|3807343_3808249_-	hypothetical protein	NA	NA	NA	NA
WP_041447215.1\|3808817_3809927_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_014779751.1\|3810302_3812036_+	hypothetical protein	NA	NA	NA	NA
WP_014779752.1\|3812063_3813362_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_014779753.1\|3813378_3814767_-\|transposase	transposase	NA	NA	NA	NA
WP_014779754.1\|3814763_3815393_-\|transposase	IS607 family transposase	Q331V0	Clostridium_botulinum_C_phage	1.0e-45	44.3
WP_014779755.1\|3815787_3816801_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_014779756.1\|3817443_3818463_+	DmsE family decaheme c-type cytochrome	NA	NA	NA	NA
WP_014779757.1\|3818556_3819555_+	MtrB/PioB family outer membrane beta-barrel protein	NA	NA	NA	NA
WP_014776653.1\|3819557_3820280_-\|transposase	IS1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

3823951 : 3879097

Pseudomonas_phage(19.05%)

integrase,capsid,tRNA,head,transposase

attL 3819534:3819593|attR 3840227:3841023

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3819534:3819593	attL	NA	NA	NA	NA
WP_014779761.1\|3823951_3826801_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	7.3e-139	37.5
WP_157174654.1\|3828357_3829263_+	HNH endonuclease	NA	NA	NA	NA
WP_014779764.1\|3829503_3831441_-	AAA family ATPase	NA	NA	NA	NA
WP_014779765.1\|3831437_3831986_-	hypothetical protein	NA	NA	NA	NA
WP_014779766.1\|3831985_3833227_-	DUF4297 domain-containing protein	NA	NA	NA	NA
WP_052315054.1\|3833647_3834685_+	ATP-binding protein	NA	NA	NA	NA
WP_014779768.1\|3834681_3835215_+	DNA mismatch endonuclease Vsr	E5E3X5	Burkholderia_phage	6.3e-36	57.4
WP_014779770.1\|3836222_3836954_-	helix-turn-helix transcriptional regulator	A7Y8H7	Pseudomonas_virus	9.0e-33	41.3
WP_014779771.1\|3837121_3837466_+	helix-turn-helix domain-containing protein	A0A2H4J3B6	uncultured_Caudovirales_phage	6.3e-13	45.6
WP_014779772.1\|3837462_3837789_+	DNA-binding protein	L7P7M7	Pseudomonas_phage	1.3e-07	54.2
WP_014779773.1\|3837785_3839327_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A125RN39	Pseudomonas_phage	8.7e-70	40.5
WP_014779774.1\|3839394_3839652_-	hypothetical protein	NA	NA	NA	NA
WP_157174655.1\|3839682_3839916_+	hypothetical protein	NA	NA	NA	NA
WP_014776653.1\|3840250_3840973_-\|transposase	IS1 family transposase	NA	NA	NA	NA
WP_014779776.1\|3841203_3841638_+	regulatory protein GemA	NA	NA	NA	NA
3840227:3841023	attR	NA	NA	NA	NA
WP_052315056.1\|3841670_3842105_+	hypothetical protein	A0A2H4J0B0	uncultured_Caudovirales_phage	1.2e-05	44.3
WP_014779778.1\|3842644_3843292_+	hypothetical protein	NA	NA	NA	NA
WP_014779779.1\|3843288_3843453_+	hypothetical protein	NA	NA	NA	NA
WP_014779780.1\|3843692_3843905_+	hypothetical protein	NA	NA	NA	NA
WP_014779781.1\|3843897_3844380_+	lysozyme	A0A2I7RLY1	Vibrio_phage	1.2e-33	59.2
WP_014779782.1\|3844387_3844831_+	hypothetical protein	NA	NA	NA	NA
WP_014779783.1\|3844827_3845136_+	hypothetical protein	A0A2I7S9D8	Vibrio_phage	4.2e-16	50.5
WP_014779784.1\|3845137_3845719_+	DUF3486 family protein	NA	NA	NA	NA
WP_157174493.1\|3845715_3845901_+	hypothetical protein	NA	NA	NA	NA
WP_014779785.1\|3845893_3847435_+	hypothetical protein	A4JWJ4	Burkholderia_virus	9.5e-109	47.8
WP_014779786.1\|3847436_3849149_+	DUF935 family protein	Q5ZQY4	Pseudomonas_phage	3.0e-95	46.6
WP_014779787.1\|3849145_3849337_+	hypothetical protein	NA	NA	NA	NA
WP_014779788.1\|3849320_3849734_+	HNH endonuclease	A0A076G4I3	Staphylococcus_phage	6.3e-07	36.5
WP_014779789.1\|3849726_3849861_+	hypothetical protein	NA	NA	NA	NA
WP_014779790.1\|3849860_3850124_+	hypothetical protein	NA	NA	NA	NA
WP_014779791.1\|3850116_3851370_+\|head	phage head morphogenesis protein, SPP1 gp7	Q5ZQY3	Pseudomonas_phage	2.4e-65	40.9
WP_014779792.1\|3851424_3852207_+	site-specific DNA-methyltransferase	B4UTY5	Rhizobium_phage	1.1e-23	34.1
WP_014779794.1\|3852295_3852838_+	phage virion morphogenesis protein	A0A2H4J9E5	uncultured_Caudovirales_phage	1.9e-11	30.8
WP_014779795.1\|3853289_3854252_+	hypothetical protein	Q6QIB7	Burkholderia_phage	3.3e-35	59.8
WP_014779796.1\|3854281_3854902_+\|head	head decoration protein	NA	NA	NA	NA
WP_014779797.1\|3854914_3855964_+\|capsid	major capsid protein	A0A067ZI79	Vibrio_phage	1.6e-27	27.6
WP_014779798.1\|3856002_3856443_+	DUF1320 family protein	NA	NA	NA	NA
WP_014779799.1\|3856502_3857111_+	hypothetical protein	NA	NA	NA	NA
WP_014779800.1\|3857122_3857578_+	hypothetical protein	R9TG00	Synechococcus_phage	7.0e-44	60.4
WP_014779801.1\|3857580_3858141_+	hypothetical protein	NA	NA	NA	NA
WP_157174495.1\|3858188_3858761_+	hypothetical protein	NA	NA	NA	NA
WP_014779803.1\|3858761_3859325_+	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_014779804.1\|3859483_3859951_+	hypothetical protein	NA	NA	NA	NA
WP_014779805.1\|3859963_3860899_+	hypothetical protein	NA	NA	NA	NA
WP_014779806.1\|3861040_3861463_+	hypothetical protein	NA	NA	NA	NA
WP_014779807.1\|3861522_3861819_+	hypothetical protein	NA	NA	NA	NA
WP_014779808.1\|3861828_3867651_+	transglycosylase SLT domain-containing protein	A0A1X9IAI7	Xanthomonas_phage	1.8e-43	40.5
WP_041447068.1\|3867647_3867992_+	hypothetical protein	R9TJ58	Synechococcus_phage	5.6e-09	33.0
WP_014779809.1\|3867988_3869995_+	hypothetical protein	R9TJ58	Synechococcus_phage	8.3e-20	30.0
WP_014779810.1\|3870030_3871011_+	hypothetical protein	NA	NA	NA	NA
WP_014776993.1\|3872415_3873600_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_014779812.1\|3873599_3876242_+	hypothetical protein	NA	NA	NA	NA
WP_014779813.1\|3876988_3877471_+	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
WP_014776993.1\|3877912_3879097_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_14

3996097 : 4052208

Bacillus_phage(30.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041447215.1\|3996097_3997207_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_014779914.1\|3997286_3998480_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_014779915.1\|3998587_3999064_-	hypothetical protein	NA	NA	NA	NA
WP_157174661.1\|3999077_3999854_-	DUF2092 domain-containing protein	NA	NA	NA	NA
WP_041447084.1\|3999891_4001613_-	SulP family inorganic anion transporter	NA	NA	NA	NA
WP_014779918.1\|4001619_4003020_-\|transposase	transposase	NA	NA	NA	NA
WP_014779919.1\|4003319_4003676_-	two pore domain potassium channel family protein	NA	NA	NA	NA
WP_014779920.1\|4003879_4005454_+	threonine ammonia-lyase, biosynthetic	NA	NA	NA	NA
WP_014779921.1\|4005450_4006278_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	A0A127AWE5	Bacillus_phage	2.4e-18	26.6
WP_014779922.1\|4006413_4007820_-	phenylacetate--CoA ligase family protein	NA	NA	NA	NA
WP_014779923.1\|4008164_4009385_-	glycosyhydrolase	NA	NA	NA	NA
WP_014779924.1\|4009406_4010582_-	TIGR03088 family PEP-CTERM/XrtA system glycosyltransferase	A0A2P0VNG4	Tetraselmis_virus	7.5e-05	32.3
WP_014779925.1\|4010706_4012539_-	asparagine synthase	A0A0N9QYX6	Chrysochromulina_ericina_virus	3.4e-12	29.7
WP_014779926.1\|4012737_4013661_+	hypothetical protein	NA	NA	NA	NA
WP_014779928.1\|4016202_4018785_-	DNA topoisomerase 3	NA	NA	NA	NA
WP_014779929.1\|4018791_4019115_-	sel1 repeat family protein	NA	NA	NA	NA
WP_014779930.1\|4019480_4021748_+	nitric-oxide reductase large subunit	NA	NA	NA	NA
WP_014779931.1\|4022090_4023317_+	DUF1015 domain-containing protein	NA	NA	NA	NA
WP_014779932.1\|4023408_4025646_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	NA	NA	NA
WP_041447737.1\|4025696_4026029_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014779934.1\|4026040_4026922_-	response regulator	W8CYM9	Bacillus_phage	1.3e-09	32.3
WP_014779935.1\|4026918_4029381_-	response regulator	A0A1V0SGX0	Hokovirus	2.8e-25	35.6
WP_083845828.1\|4029414_4029888_-	peroxiredoxin	NA	NA	NA	NA
WP_014779937.1\|4031291_4032008_-	response regulator	W8CYM9	Bacillus_phage	2.8e-31	35.1
WP_014779939.1\|4032835_4033405_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_014779940.1\|4033496_4034099_-	methyltransferase	NA	NA	NA	NA
WP_014779941.1\|4034236_4035427_+	nickel-dependent hydrogenase large subunit	NA	NA	NA	NA
WP_014779942.1\|4035520_4035799_+	HypC/HybG/HupF family hydrogenase formation chaperone	NA	NA	NA	NA
WP_014779943.1\|4035795_4036935_+	hydrogenase formation protein HypD	NA	NA	NA	NA
WP_014779944.1\|4037061_4037565_+	DUF1640 domain-containing protein	NA	NA	NA	NA
WP_014779945.1\|4037564_4038611_+	hydrogenase expression/formation protein HypE	NA	NA	NA	NA
WP_041447739.1\|4038707_4039166_+	cache domain-containing protein	NA	NA	NA	NA
WP_014779947.1\|4039366_4039738_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_041447740.1\|4039928_4040906_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014779949.1\|4041137_4042196_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	3.2e-87	47.3
WP_014779950.1\|4042532_4043414_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	6.3e-97	57.5
WP_014779951.1\|4043410_4043977_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.1e-49	55.6
WP_014779952.1\|4043973_4044885_+	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
WP_014779953.1\|4045112_4045721_+	DedA family protein	NA	NA	NA	NA
WP_041447085.1\|4046040_4046364_-\|protease	protease inhibitor I42 family protein	NA	NA	NA	NA
WP_014779954.1\|4046465_4047920_-\|protease	cysteine protease	L7VIN8	Achaea_janata_granulovirus	2.3e-27	38.8
WP_157174501.1\|4047995_4048298_-	hypothetical protein	NA	NA	NA	NA
WP_014779956.1\|4048316_4048541_-	hypothetical protein	NA	NA	NA	NA
WP_014776993.1\|4048701_4049886_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_014779957.1\|4049958_4050378_-	hypothetical protein	NA	NA	NA	NA
WP_014779958.1\|4050379_4050589_-	hypothetical protein	NA	NA	NA	NA
WP_014776993.1\|4051023_4052208_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

4635778 : 4755128

105

Bacillus_virus(13.04%)

integrase,protease,tRNA,lysis,transposase

attL 4752360:4752376|attR 4756143:4756159

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041447215.1\|4635778_4636888_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_014780461.1\|4636960_4639258_-	MMPL family transporter	NA	NA	NA	NA
WP_014780462.1\|4639279_4640713_-	hypothetical protein	NA	NA	NA	NA
WP_014780463.1\|4640709_4641528_-	outer membrane lipoprotein-sorting protein	NA	NA	NA	NA
WP_157174521.1\|4641619_4642348_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_014776993.1\|4642446_4643631_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_014780465.1\|4643617_4643950_-	hypothetical protein	NA	NA	NA	NA
WP_014780466.1\|4644188_4645082_-	ThiF family adenylyltransferase	NA	NA	NA	NA
WP_014780467.1\|4645287_4646031_-	PEP-CTERM/exosortase system-associated acyltransferase	NA	NA	NA	NA
WP_014780468.1\|4646150_4646852_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014780469.1\|4647523_4648420_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_041447124.1\|4648664_4649999_+	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_157174522.1\|4649973_4650921_+	HDOD domain-containing protein	NA	NA	NA	NA
WP_014780472.1\|4651286_4652675_-	TIGR03013 family PEP-CTERM/XrtA system glycosyltransferase	NA	NA	NA	NA
WP_014780473.1\|4652925_4653117_-	hypothetical protein	NA	NA	NA	NA
WP_014780474.1\|4653307_4654444_-	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_014780475.1\|4654436_4655357_-	HprK-related kinase A	NA	NA	NA	NA
WP_083845797.1\|4655353_4655665_-	HPr-rel-A system PqqD family peptide chaperone	NA	NA	NA	NA
WP_014780476.1\|4656546_4657815_-	UDP-N-acetyl-D-mannosamine dehydrogenase	NA	NA	NA	NA
WP_052315141.1\|4657937_4659143_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	2.8e-23	27.6
WP_014780478.1\|4659558_4660899_+	Fe-S oxidoreductase	NA	NA	NA	NA
WP_014780479.1\|4660960_4661545_+	DUF3501 family protein	NA	NA	NA	NA
WP_014780480.1\|4661741_4662896_+	homocitrate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	1.9e-05	25.0
WP_014780481.1\|4662907_4663450_+	hypothetical protein	NA	NA	NA	NA
WP_157174524.1\|4663642_4664074_+	SH3 domain-containing protein	NA	NA	NA	NA
WP_041447816.1\|4664204_4664546_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_014780484.1\|4664558_4664771_+	hypothetical protein	NA	NA	NA	NA
WP_014780485.1\|4664995_4665340_+	nitrogenase-stabilizing/protective protein NifW	NA	NA	NA	NA
WP_014780486.1\|4665323_4665821_+	nitrogen fixation protein NifZ	NA	NA	NA	NA
WP_014780487.1\|4665817_4666684_+	nitrogen fixation protein NifM	NA	NA	NA	NA
WP_014780488.1\|4666947_4668234_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.0e-100	48.6
WP_014780489.1\|4668621_4669521_+	pseudouridine synthase	NA	NA	NA	NA
WP_041447199.1\|4669950_4671060_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_014780490.1\|4671187_4672495_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	5.1e-79	40.7
WP_014780491.1\|4672528_4673230_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_014776674.1\|4673483_4674890_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_014780493.1\|4676231_4678778_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.4e-85	46.3
WP_014780494.1\|4679050_4681762_+	response regulator	A0A1V0SKH0	Klosneuvirus	4.6e-05	22.7
WP_014780495.1\|4681761_4683432_+	response regulator	A0A1V0SGX0	Hokovirus	1.9e-49	31.2
WP_174284523.1\|4683641_4683842_-	cold-shock protein	A0A1X9IGI9	Lactococcus_phage	2.8e-13	54.0
WP_014780497.1\|4684422_4685097_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_014780498.1\|4685121_4686033_-	hypothetical protein	NA	NA	NA	NA
WP_014780499.1\|4686218_4687208_-	adenosine kinase	NA	NA	NA	NA
WP_157174525.1\|4687357_4687777_+	hypothetical protein	NA	NA	NA	NA
WP_014780500.1\|4689121_4690861_-	thiol reductant ABC exporter subunit CydC	W8CYL7	Bacillus_phage	9.3e-28	26.3
WP_014780501.1\|4690857_4692657_-	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	3.0e-37	27.5
WP_014780502.1\|4692828_4693431_+	Uma2 family endonuclease	NA	NA	NA	NA
WP_014780504.1\|4693610_4694402_+\|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis family protein	NA	NA	NA	NA
WP_157174681.1\|4694494_4695619_+	toxic anion resistance protein	A0A291I9K4	Lactobacillus_phage	9.6e-26	25.5
WP_014780506.1\|4695718_4695982_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_014780507.1\|4696001_4696520_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_014780508.1\|4696556_4697306_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_014780509.1\|4697327_4697672_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_014780510.1\|4697674_4699114_+	exodeoxyribonuclease I	NA	NA	NA	NA
WP_014780511.1\|4699140_4699866_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_014780512.1\|4699957_4701286_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A1X9I6F4	Streptococcus_phage	2.1e-35	28.0
WP_157174526.1\|4701396_4701636_-	hypothetical protein	NA	NA	NA	NA
WP_014780513.1\|4701672_4702140_+	CYTH domain-containing protein	NA	NA	NA	NA
WP_014780514.1\|4702144_4702627_+	L,D-transpeptidase	NA	NA	NA	NA
WP_014780515.1\|4702637_4703897_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
WP_014780516.1\|4704129_4705677_+	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
WP_014780517.1\|4705680_4706520_+	thymidylate synthase	A6M9A2	Geobacillus_virus	3.1e-101	62.0
WP_083845830.1\|4707008_4708808_+	LTA synthase family protein	NA	NA	NA	NA
WP_014780520.1\|4708893_4710168_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	4.9e-18	27.1
WP_014780521.1\|4710271_4710595_+	hypothetical protein	NA	NA	NA	NA
WP_014780522.1\|4710738_4710966_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_014780523.1\|4710987_4711686_+	response regulator transcription factor	NA	NA	NA	NA
WP_014780524.1\|4711682_4713020_+	HAMP domain-containing protein	NA	NA	NA	NA
WP_157174527.1\|4713138_4715226_+	site-specific DNA-methyltransferase	A0A2K5B2C1	Erysipelothrix_phage	3.3e-88	34.2
WP_014780526.1\|4715235_4716318_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	9.6e-15	25.6
WP_014780527.1\|4716317_4716992_+	DUF4276 family protein	NA	NA	NA	NA
WP_014780528.1\|4717040_4717361_-	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
WP_041447824.1\|4717332_4717596_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_014780530.1\|4717706_4720493_+	DEAD/DEAH box helicase family protein	A0A2K5B256	Erysipelothrix_phage	2.6e-136	34.4
WP_014780531.1\|4720585_4721593_-	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	6.1e-88	47.4
WP_041447129.1\|4721830_4722295_-	hypothetical protein	NA	NA	NA	NA
WP_014780533.1\|4722301_4722625_-	succinate dehydrogenase assembly factor 2	NA	NA	NA	NA
WP_014780534.1\|4722966_4723659_-	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA
WP_014780535.1\|4723798_4724854_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_014780536.1\|4724875_4726639_-	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA
WP_014780537.1\|4726635_4726986_-	succinate dehydrogenase, hydrophobic membrane anchor protein	NA	NA	NA	NA
WP_014780538.1\|4726982_4727366_-	succinate dehydrogenase, cytochrome b556 subunit	NA	NA	NA	NA
WP_014780539.1\|4727604_4728726_-	FIST C-terminal domain-containing protein	NA	NA	NA	NA
WP_014780540.1\|4728761_4730672_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	5.2e-88	34.4
WP_014780541.1\|4731232_4735135_+	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	4.2e-121	57.5
WP_174284514.1\|4735216_4735564_-	TusE/DsrC/DsvC family sulfur relay protein	NA	NA	NA	NA
WP_014780543.1\|4735903_4736926_-	response regulator	NA	NA	NA	NA
WP_014780544.1\|4737023_4737713_+	6-phosphogluconolactonase	NA	NA	NA	NA
WP_014780545.1\|4737759_4738248_-	HyaD/HybD family hydrogenase maturation endopeptidase	NA	NA	NA	NA
WP_014780546.1\|4738371_4738641_+	HypC/HybG/HupF family hydrogenase formation chaperone	NA	NA	NA	NA
WP_174284515.1\|4738696_4739350_-	hypothetical protein	NA	NA	NA	NA
WP_014780548.1\|4739474_4739981_+\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_157174528.1\|4739919_4740594_-	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	NA	NA	NA	NA
WP_041447827.1\|4740773_4741829_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_014780551.1\|4741825_4744975_+	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_014780552.1\|4745018_4746860_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_014780553.1\|4746863_4747445_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_157174529.1\|4748071_4748248_+	hypothetical protein	NA	NA	NA	NA
WP_014780554.1\|4748278_4748569_+\|transposase	transposase	NA	NA	NA	NA
WP_157174530.1\|4750095_4750815_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	5.0e-20	40.3
WP_157174531.1\|4750838_4751081_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	6.7e-09	44.9
WP_157174532.1\|4751246_4751759_+	hypothetical protein	NA	NA	NA	NA
WP_014780556.1\|4751857_4752415_+	hypothetical protein	NA	NA	NA	NA
4752360:4752376	attL	NA	NA	NA	NA
WP_014776775.1\|4752862_4753465_+	recombinase family protein	E5FFF9	Burkholderia_phage	1.1e-39	49.7
WP_014780557.1\|4753490_4755128_+\|integrase	integrase	NA	NA	NA	NA
4756143:4756159	attR	NA	NA	NA	NA

DBSCAN-SWA_16

4764484 : 4770226

Rhizobium_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014780566.1\|4764484_4765168_-	helix-turn-helix transcriptional regulator	H1ZZB6	Pseudomonas_virus	1.7e-49	47.2
WP_014780567.1\|4765389_4765725_+	helix-turn-helix domain-containing protein	A0A2H4J3B6	uncultured_Caudovirales_phage	2.6e-11	42.3
WP_014780568.1\|4765721_4766048_+	DNA-binding protein	A0A2P9JZG7	Alteromonadaceae_phage	7.6e-08	49.1
WP_014780569.1\|4766044_4768354_+\|transposase	Mu transposase C-terminal domain-containing protein	Q38013	Pseudomonas_phage	3.4e-134	41.2
WP_014780570.1\|4768501_4769266_+	AAA family ATPase	R9U430	Rhizobium_phage	1.4e-31	37.1
WP_014780571.1\|4769265_4769892_+	hypothetical protein	NA	NA	NA	NA
WP_014780572.1\|4769884_4770226_+	helix-turn-helix transcriptional regulator	R9U499	Rhizobium_phage	3.0e-07	33.0

DBSCAN-SWA_17

4777465 : 4788688

Pseudomonas_phage(37.5%)

terminase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014780589.1\|4777465_4778116_+	Rha family transcriptional regulator	A0A2L1IV30	Escherichia_phage	7.0e-21	47.2
WP_014780590.1\|4778112_4778400_+	hypothetical protein	NA	NA	NA	NA
WP_014780591.1\|4778390_4778642_+	hypothetical protein	NA	NA	NA	NA
WP_014780592.1\|4778844_4779429_+	hypothetical protein	A0A172PZR7	Pseudomonas_phage	4.1e-36	54.3
WP_014780593.1\|4779425_4779800_+	hypothetical protein	NA	NA	NA	NA
WP_014780594.1\|4779912_4780170_+	hypothetical protein	NA	NA	NA	NA
WP_014780595.1\|4780166_4780694_+	N-acetylmuramoyl-L-alanine amidase	I6R9Z4	Marinomonas_phage	6.5e-17	35.8
WP_014780596.1\|4780693_4780903_+	hypothetical protein	NA	NA	NA	NA
WP_014780597.1\|4780909_4781413_+	DUF1804 family protein	A0A0A1IX73	Pseudomonas_phage	7.6e-23	39.5
WP_014780598.1\|4781440_4783126_+\|terminase	phage terminase large subunit	B7SDZ1	Pseudomonas_virus	2.9e-212	66.9
WP_014780599.1\|4783157_4784726_+	DUF935 family protein	J9SVP3	Pseudomonas_phage	1.9e-96	42.4
WP_014780600.1\|4784718_4784961_+	hypothetical protein	NA	NA	NA	NA
WP_014780601.1\|4784960_4785245_+	hypothetical protein	NA	NA	NA	NA
WP_014780602.1\|4785244_4786597_+\|capsid	minor capsid protein	B7SDZ3	Pseudomonas_virus	5.0e-69	38.2
WP_014780603.1\|4786704_4786866_+	hypothetical protein	NA	NA	NA	NA
WP_014780604.1\|4786858_4787341_+	phage virion morphogenesis protein	NA	NA	NA	NA
WP_014780605.1\|4787695_4788688_+	hypothetical protein	A4JWJ9	Burkholderia_virus	1.2e-51	39.2

DBSCAN-SWA_18

4879750 : 4946723

Escherichia_phage(33.33%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014776993.1\|4879750_4880935_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_014776993.1\|4882233_4883418_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_014780680.1\|4883452_4884019_-	CRISPR-associated protein Cas4	NA	NA	NA	NA
WP_014780681.1\|4884015_4884321_-	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_014780682.1\|4884342_4885371_-	CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_014780683.1\|4885700_4886270_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_014780684.1\|4886296_4887037_-	hypothetical protein	NA	NA	NA	NA
WP_014780685.1\|4887024_4887378_-	hypothetical protein	NA	NA	NA	NA
WP_041447215.1\|4887499_4888609_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_014780686.1\|4888521_4889118_-	CRISPR-associated protein Cmr3	NA	NA	NA	NA
WP_014780687.1\|4889114_4891064_-	type III-B CRISPR-associated protein Cas10/Cmr2	NA	NA	NA	NA
WP_014780688.1\|4891060_4892050_-	type III-B CRISPR module RAMP protein Cmr1	NA	NA	NA	NA
WP_014780689.1\|4892105_4893338_-	TIGR02221 family CRISPR-associated protein	NA	NA	NA	NA
WP_157174543.1\|4893415_4893949_-	hypothetical protein	NA	NA	NA	NA
WP_041447215.1\|4894057_4895167_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_083845803.1\|4895215_4895800_-	TIGR02584 family CRISPR-associated protein	NA	NA	NA	NA
WP_041447857.1\|4896266_4897790_+	fumarate hydratase	NA	NA	NA	NA
WP_014780691.1\|4897839_4898526_+	YceH family protein	NA	NA	NA	NA
WP_174284524.1\|4898734_4900090_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_014780693.1\|4900207_4900345_+	hypothetical protein	NA	NA	NA	NA
WP_014780694.1\|4900358_4901312_+	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NA	NA	NA	NA
WP_014780695.1\|4901629_4901905_+	hypothetical protein	NA	NA	NA	NA
WP_014780696.1\|4902071_4904972_+	sulfite dehydrogenase subunit SoeA	A0A077SK27	Escherichia_phage	4.0e-07	27.3
WP_014780697.1\|4904968_4905691_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_014780698.1\|4905805_4906783_+	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
WP_014780699.1\|4906827_4907688_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_014780700.1\|4907720_4909172_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_014780701.1\|4909316_4914239_-	glycosyltransferase	A0A1D7XFH6	Escherichia_phage	1.9e-09	29.5
WP_014780702.1\|4914289_4914568_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_014780705.1\|4915630_4918255_+	radical SAM protein	NA	NA	NA	NA
WP_014780706.1\|4918475_4919423_+	sel1 repeat family protein	NA	NA	NA	NA
WP_014780707.1\|4919387_4923131_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	1.4e-33	35.2
WP_014780708.1\|4923276_4923906_-	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_041447149.1\|4924005_4925127_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_052315146.1\|4925812_4926700_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_052315085.1\|4926793_4927456_-	AmmeMemoRadiSam system protein A	NA	NA	NA	NA
WP_014780713.1\|4927442_4928228_-	AmmeMemoRadiSam system protein B	NA	NA	NA	NA
WP_014780714.1\|4928411_4929590_-\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_014780715.1\|4929564_4930035_-	hypothetical protein	NA	NA	NA	NA
WP_157174544.1\|4930338_4932237_+	transglycosylase SLT domain-containing protein	K4NWI2	Pseudomonas_phage	4.2e-13	40.2
WP_041447151.1\|4932325_4932556_+	hypothetical protein	NA	NA	NA	NA
WP_014780718.1\|4932542_4932869_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_014780719.1\|4933071_4933731_+	hypothetical protein	NA	NA	NA	NA
WP_014780720.1\|4933720_4934518_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_014780721.1\|4935654_4936083_-	phosphate-starvation-inducible PsiE family protein	NA	NA	NA	NA
WP_014780722.1\|4936111_4939180_-	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	9.9e-57	21.7
WP_014780723.1\|4939176_4940280_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_041447153.1\|4940556_4941264_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_014780725.1\|4941433_4943689_+	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	7.5e-86	32.0
WP_014780726.1\|4943720_4944065_-	TusE/DsrC/DsvC family sulfur relay protein	NA	NA	NA	NA
WP_014780727.1\|4944199_4945276_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_041447215.1\|4945613_4946723_+\|transposase	IS5 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_018012

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection