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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_016821 Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE03, complete sequence 0 crisprs NA 0 0 0 0
NC_016820 Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE02, complete sequence 0 crisprs NA 0 0 4 0
NC_016827 Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE01, complete sequence 0 crisprs NA 0 0 0 0
NC_016828 Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE04, complete sequence 0 crisprs csa3 0 0 1 0
NC_016805 Leuconostoc mesenteroides subsp. mesenteroides J18, complete sequence 1 crisprs csa3,cas3,DEDDh 0 0 5 0

Results visualization

1. NC_016805
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_016805_1 362155-362257 Unclear NA
1 spacers
cas3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 58334 : 75032 18 Bacillus_virus(33.33%) protease,bacteriocin NA
DBSCAN-SWA_2 545458 : 558623 13 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_3 800717 : 809376 7 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_4 1408726 : 1421778 11 Staphylococcus_phage(37.5%) protease,integrase attL 1399899:1399913|attR 1418675:1418689
DBSCAN-SWA_5 1635025 : 1645796 12 Pandoravirus(14.29%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_016828
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 14729 14 Streptomyces_phage(16.67%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NC_016820
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 9468 8 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_2 13998 : 21974 6 Lactobacillus_phage(25.0%) transposase NA
DBSCAN-SWA_3 25577 : 27745 3 Bacillus_phage(50.0%) integrase attL 24841:24855|attR 28816:28830
DBSCAN-SWA_4 32057 : 33935 4 Bacillus_phage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage