CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NC_016592	Burkholderia sp. YI23 plasmid byi_3p, complete sequence	0 crisprs	WYL	0	0	0
NC_016589	Burkholderia sp. YI23 chromosome 1, complete sequence	2 crisprs	cas3,DEDDh,DinG,csa3,RT,WYL	2	9	1
NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	0 crisprs	csa3,PD-DExK	0	0	5
NC_016625	Burkholderia sp. YI23 chromosome 2, complete sequence	2 crisprs	DEDDh,DinG,csa3,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	0	11	4
NC_016590	Burkholderia sp. YI23 chromosome 3, complete sequence	2 crisprs	NA	0	0	1
NC_016591	Burkholderia sp. YI23 plasmid byi_2p, complete sequence	2 crisprs	NA	0	2	23

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

158028 : 215110

Klosneuvirus(25.0%)

holin,plate,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014251915.1\|158028_159663_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	4.8e-58	31.2
WP_014251916.1\|159683_160706_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_148276266.1\|160921_161563_+	hypothetical protein	NA	NA	NA	NA
WP_014251918.1\|161588_162419_+	hypothetical protein	NA	NA	NA	NA
WP_014251919.1\|162441_163209_-	hypothetical protein	E5EQJ5	Micromonas_sp._RCC1109_virus	6.0e-11	27.1
WP_081478283.1\|163239_165057_-	MltA domain-containing protein	NA	NA	NA	NA
WP_014251921.1\|165094_166858_-	DUF4384 domain-containing protein	NA	NA	NA	NA
WP_014251922.1\|166854_167577_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_041733221.1\|167573_171203_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_041733223.1\|171205_172513_-	DotU family type VI secretion system protein	NA	NA	NA	NA
WP_014251925.1\|172545_173916_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_014251926.1\|174036_174561_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_148276335.1\|174942_177060_+	CHAT domain-containing protein	NA	NA	NA	NA
WP_014251928.1\|177121_178873_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_014251929.1\|178914_185820_+	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
WP_014251930.1\|185832_186843_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_014251931.1\|186922_187459_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_041733227.1\|187479_188985_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_014251933.1\|189012_189798_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_014251934.1\|189817_191185_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_014251935.1\|191215_193864_-	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	1.5e-82	30.5
WP_063716389.1\|194152_194683_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_081478284.1\|194675_195206_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_063716368.1\|195202_195898_+	hypothetical protein	NA	NA	NA	NA
WP_175582556.1\|195926_196262_+	OmpA family protein	NA	NA	NA	NA
WP_081478286.1\|196520_197633_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_014251937.1\|197608_199492_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_014251938.1\|199503_199992_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_148276268.1\|200019_200619_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_014251940.1\|200770_201253_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_014251941.1\|201273_203655_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	3.4e-36	27.5
WP_014251942.1\|203674_204379_-	hypothetical protein	NA	NA	NA	NA
WP_014251943.1\|204375_205092_-	hypothetical protein	NA	NA	NA	NA
WP_014251944.1\|205124_205847_-	hypothetical protein	NA	NA	NA	NA
WP_014251945.1\|205872_206265_-	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_014251946.1\|206261_207299_-	hypothetical protein	NA	NA	NA	NA
WP_014251947.1\|207295_208414_-	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_148276271.1\|208410_209670_-	TIGR02270 family protein	NA	NA	NA	NA
WP_063716370.1\|209704_210202_-	hypothetical protein	NA	NA	NA	NA
WP_148276336.1\|210403_211111_+	outer membrane beta-barrel protein	NA	NA	NA	NA
WP_050878602.1\|211118_214457_-	AAA family ATPase	NA	NA	NA	NA
WP_014251952.1\|214717_215110_-\|protease	protease inhibitor I42 family protein	NA	NA	NA	NA

DBSCAN-SWA_2

1599536 : 1635747

Leptospira_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041733643.1\|1599536_1601105_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	4.8e-124	46.9
WP_035511880.1\|1601140_1601392_-	hypothetical protein	NA	NA	NA	NA
WP_075583988.1\|1601642_1601990_+	DUF2934 domain-containing protein	NA	NA	NA	NA
WP_075583989.1\|1602283_1602736_+	universal stress protein	NA	NA	NA	NA
WP_014253170.1\|1603101_1603392_+	superinfection immunity protein	NA	NA	NA	NA
WP_085952615.1\|1604345_1605477_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	6.1e-12	25.7
WP_062255151.1\|1605876_1606140_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_014253172.1\|1606302_1607508_-	class I SAM-dependent methyltransferase	A0A2I2L5L3	Orpheovirus	9.9e-45	35.8
WP_014253173.1\|1607836_1609990_+	amylo-alpha-1,6-glucosidase	NA	NA	NA	NA
WP_081478335.1\|1610023_1611340_-	cytochrome c	NA	NA	NA	NA
WP_145944639.1\|1611345_1611783_-	hypothetical protein	NA	NA	NA	NA
WP_014253176.1\|1611785_1612400_-	heme-copper oxidase subunit III	NA	NA	NA	NA
WP_014253177.1\|1612396_1614412_-	cytochrome c oxidase subunit I	NA	NA	NA	NA
WP_081478305.1\|1614408_1615473_-	cytochrome c oxidase subunit II	NA	NA	NA	NA
WP_050878646.1\|1615488_1617297_-	glycoside hydrolase family 15 protein	NA	NA	NA	NA
WP_035510353.1\|1617272_1618265_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_014253181.1\|1618328_1619972_-	GMC family oxidoreductase	NA	NA	NA	NA
WP_014253182.1\|1619961_1620630_-	gluconate 2-dehydrogenase subunit 3 family protein	NA	NA	NA	NA
WP_014253183.1\|1620626_1621541_-	hypothetical protein	NA	NA	NA	NA
WP_014253184.1\|1621556_1622663_-	mandelate racemase	Q6A202	Oenococcus_phage	8.9e-16	25.0
WP_014253185.1\|1622680_1624477_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA
WP_014253186.1\|1625029_1625455_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_014253187.1\|1626246_1626432_-	hypothetical protein	NA	NA	NA	NA
WP_035510348.1\|1626591_1626915_+	DUF1840 domain-containing protein	NA	NA	NA	NA
WP_085952615.1\|1628356_1629488_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	6.1e-12	25.7
WP_041734058.1\|1629991_1630447_+	DUF2934 domain-containing protein	NA	NA	NA	NA
WP_144404190.1\|1630925_1631324_+\|transposase	transposase	NA	NA	NA	NA
WP_014194149.1\|1631290_1631659_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_085952683.1\|1632754_1633890_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.4e-11	27.1
WP_014253192.1\|1635327_1635747_-\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	1.3e-07	38.0

DBSCAN-SWA_3

1648173 : 1713769

Lake_Baikal_phage(14.29%)

integrase,transposase

attL 1702664:1702689|attR 1706107:1706132

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014253196.1\|1648173_1649385_-\|integrase	tyrosine-type recombinase/integrase	A0A166YH27	Gordonia_phage	3.5e-05	27.8
WP_014253197.1\|1649534_1650551_+	DNA-binding protein	NA	NA	NA	NA
WP_014253198.1\|1650635_1650911_+	hypothetical protein	NA	NA	NA	NA
WP_014253199.1\|1650983_1651262_+	HU family DNA-binding protein	Q6QIE5	Burkholderia_phage	4.5e-17	56.2
WP_014253200.1\|1651290_1651494_-	hypothetical protein	NA	NA	NA	NA
WP_014253201.1\|1651593_1652034_+	SET domain-containing protein-lysine N-methyltransferase	NA	NA	NA	NA
WP_148276360.1\|1652227_1653355_+	hypothetical protein	NA	NA	NA	NA
WP_014253203.1\|1653529_1653838_+	hypothetical protein	NA	NA	NA	NA
WP_050878693.1\|1653980_1655219_-	hypothetical protein	NA	NA	NA	NA
WP_081478336.1\|1655497_1655893_-	hypothetical protein	NA	NA	NA	NA
WP_041733659.1\|1657970_1658270_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_014253205.1\|1658266_1658524_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_014253206.1\|1659263_1660553_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_175582571.1\|1660957_1661599_-	hypothetical protein	NA	NA	NA	NA
WP_014253208.1\|1662161_1663064_+	aspartyl/asparaginyl beta-hydroxylase domain-containing protein	S4VR59	Pandoravirus	7.5e-29	35.9
WP_148276316.1\|1663341_1663653_-	hypothetical protein	NA	NA	NA	NA
WP_014253209.1\|1664908_1667278_+	PAS domain S-box protein	B5LWN8	Feldmannia_species_virus	5.6e-07	26.8
WP_041734065.1\|1668660_1668975_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_014253211.1\|1669476_1670958_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_014253212.1\|1671032_1671686_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_050878647.1\|1671858_1672158_-	hypothetical protein	NA	NA	NA	NA
WP_014253214.1\|1672271_1673990_-	response regulator	NA	NA	NA	NA
WP_014253215.1\|1673976_1675482_-	AAA family ATPase	NA	NA	NA	NA
WP_041733667.1\|1675599_1677120_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_041733672.1\|1679415_1680606_+	acyltransferase	NA	NA	NA	NA
WP_148276320.1\|1680676_1680844_+	DUF3018 family protein	NA	NA	NA	NA
WP_014253220.1\|1681527_1681932_+	DUF2384 domain-containing protein	NA	NA	NA	NA
WP_081478307.1\|1681928_1682204_+	RES domain-containing protein	NA	NA	NA	NA
WP_014253221.1\|1683267_1683690_-	PIN domain-containing protein	NA	NA	NA	NA
WP_014253222.1\|1683686_1683929_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_085952683.1\|1684211_1685347_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.4e-11	27.1
WP_085952684.1\|1686193_1688017_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	7.7e-33	32.0
WP_014253224.1\|1688242_1688458_-	hypothetical protein	NA	NA	NA	NA
WP_014253225.1\|1688608_1688890_-	hypothetical protein	NA	NA	NA	NA
WP_008344606.1\|1689866_1690070_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	2.7e-19	68.7
WP_014253226.1\|1690612_1690900_+	hypothetical protein	NA	NA	NA	NA
WP_014253227.1\|1691172_1691415_+	hypothetical protein	NA	NA	NA	NA
WP_041733677.1\|1693418_1694222_-	transglutaminase family protein	NA	NA	NA	NA
WP_014253231.1\|1695781_1695967_+	hypothetical protein	NA	NA	NA	NA
WP_041733679.1\|1696202_1696421_-	hypothetical protein	NA	NA	NA	NA
WP_008344589.1\|1696684_1696888_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	9.2e-20	70.1
WP_081478309.1\|1698018_1698213_+	hypothetical protein	NA	NA	NA	NA
WP_041733681.1\|1698643_1699063_+	hypothetical protein	NA	NA	NA	NA
WP_175582572.1\|1699488_1700499_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_041733683.1\|1700753_1700933_+	hypothetical protein	NA	NA	NA	NA
WP_014253233.1\|1700929_1701700_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.1e-23	30.0
1702664:1702689	attL	NA	NA	NA	NA
WP_014190258.1\|1702793_1704056_+\|integrase	tyrosine-type recombinase/integrase	A0A142F1N9	Bacillus_phage	1.6e-08	20.7
WP_014190257.1\|1704052_1705045_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	2.8e-05	43.8
WP_014253235.1\|1705041_1706046_+\|integrase	site-specific integrase	A0A0K2FN88	Mycobacterium_phage	3.4e-06	24.3
WP_014253237.1\|1707091_1708111_+\|transposase	IS110 family transposase	NA	NA	NA	NA
1706107:1706132	attR	NA	NA	NA	NA
WP_175582588.1\|1708785_1709154_+	response regulator	NA	NA	NA	NA
WP_014253238.1\|1709506_1711033_-	PAS domain S-box protein	Q8QKV7	Ectocarpus_siliculosus_virus	5.2e-06	31.2
WP_014253240.1\|1712310_1712529_+	hypothetical protein	NA	NA	NA	NA
WP_085952685.1\|1712544_1713769_+\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	1.8e-105	64.8

DBSCAN-SWA_4

1733283 : 1793128

Pseudomonas_phage(20.0%)

integrase,transposase

attL 1783080:1783097|attR 1810892:1810909

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085952686.1\|1733283_1734419_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.0e-11	27.1
WP_014253259.1\|1736178_1736850_+	hypothetical protein	NA	NA	NA	NA
WP_148276362.1\|1736998_1737577_+	RES domain-containing protein	NA	NA	NA	NA
WP_014253262.1\|1737837_1738116_-	HU family DNA-binding protein	B5TA87	Burkholderia_phage	1.9e-15	53.3
WP_041733689.1\|1738185_1738464_-	hypothetical protein	NA	NA	NA	NA
WP_041733691.1\|1739240_1739531_-	Arc family DNA-binding protein	A0A0H5AWD9	Pseudomonas_phage	3.0e-08	69.0
WP_014253264.1\|1739915_1740284_+	TrbC/VirB2 family protein	NA	NA	NA	NA
WP_041733693.1\|1740280_1740583_+	VirB3 family type IV secretion system protein	NA	NA	NA	NA
WP_041734083.1\|1740605_1743233_+	type VI secretion protein	NA	NA	NA	NA
WP_014253266.1\|1743244_1743907_+	hypothetical protein	NA	NA	NA	NA
WP_041733697.1\|1744153_1744540_+	hypothetical protein	NA	NA	NA	NA
WP_014253267.1\|1744542_1745409_+	type IV secretion system protein	NA	NA	NA	NA
WP_014253268.1\|1745405_1746083_+	type IV secretion system protein	NA	NA	NA	NA
WP_014253269.1\|1746121_1746931_+	TrbG/VirB9 family P-type conjugative transfer protein	NA	NA	NA	NA
WP_014253270.1\|1746932_1748156_+	TrbI/VirB10 family protein	NA	NA	NA	NA
WP_014253271.1\|1748165_1749188_+	P-type DNA transfer ATPase VirB11	NA	NA	NA	NA
WP_041734085.1\|1749204_1750095_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_014253273.1\|1750139_1750727_+	hypothetical protein	NA	NA	NA	NA
WP_014253274.1\|1750856_1751096_+	hypothetical protein	NA	NA	NA	NA
WP_014253275.1\|1751158_1754215_-	conjugative relaxase	NA	NA	NA	NA
WP_014253276.1\|1754228_1755872_-	type IV secretion system DNA-binding domain-containing protein	NA	NA	NA	NA
WP_041733700.1\|1755876_1756089_-	hypothetical protein	NA	NA	NA	NA
WP_041733701.1\|1756088_1756496_-	hypothetical protein	NA	NA	NA	NA
WP_041733704.1\|1756887_1757352_+	hypothetical protein	NA	NA	NA	NA
WP_014253278.1\|1757348_1758053_+	hypothetical protein	NA	NA	NA	NA
WP_041734087.1\|1758101_1758458_+	hypothetical protein	NA	NA	NA	NA
WP_014253280.1\|1758660_1759092_-	hypothetical protein	NA	NA	NA	NA
WP_041733706.1\|1759165_1760080_-	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	7.7e-74	47.1
WP_014253282.1\|1761008_1762196_+	AAA family ATPase	A0A2H4JGZ2	uncultured_Caudovirales_phage	9.2e-11	30.3
WP_014253283.1\|1762198_1763170_+	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA
WP_014253284.1\|1763486_1764671_+	hypothetical protein	NA	NA	NA	NA
WP_014253285.1\|1766824_1767187_+	hypothetical protein	NA	NA	NA	NA
WP_041733708.1\|1767647_1768352_+	hypothetical protein	NA	NA	NA	NA
WP_014253287.1\|1768344_1770294_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_014253288.1\|1770487_1771951_-	putative DNA binding domain-containing protein	NA	NA	NA	NA
WP_014253289.1\|1772252_1772741_+	hypothetical protein	NA	NA	NA	NA
WP_014253290.1\|1773494_1774778_-	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	8.4e-127	56.9
WP_041733711.1\|1774786_1776205_-	pyruvate kinase	NA	NA	NA	NA
WP_014253292.1\|1776207_1777539_-	glycerate kinase	NA	NA	NA	NA
WP_014253293.1\|1777758_1778847_-	tartrate dehydrogenase	NA	NA	NA	NA
WP_014253294.1\|1778936_1779545_-	L(+)-tartrate dehydratase subunit beta	NA	NA	NA	NA
WP_014253295.1\|1779541_1780441_-	L(+)-tartrate dehydratase subunit alpha	NA	NA	NA	NA
WP_014253296.1\|1780485_1781787_-	MFS transporter	NA	NA	NA	NA
WP_014253297.1\|1781955_1782873_+	LysR family transcriptional regulator	NA	NA	NA	NA
1783080:1783097	attL	NA	NA	NA	NA
WP_014193976.1\|1783140_1784301_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	9.3e-40	37.6
WP_041733713.1\|1784496_1785111_-\|integrase	tyrosine-type recombinase/integrase	A0A141E172	Streptococcus_phage	2.0e-09	30.9
WP_014253298.1\|1785371_1786871_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_014253299.1\|1786867_1787689_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	3.7e-27	33.1
WP_081478313.1\|1788903_1789776_-	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_014253300.1\|1790234_1791350_+	HAMP domain-containing histidine kinase	A0A1B0VMK3	Pseudomonas_phage	2.4e-69	41.2
WP_014253301.1\|1791697_1793128_+\|transposase	IS1182 family transposase	NA	NA	NA	NA
1810892:1810909	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1846554 : 1911894

Mycobacterium_phage(15.38%)

integrase,transposase

attL 1846512:1846571|attR 1884479:1885920

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1846512:1846571	attL	NA	NA	NA	NA
WP_041733748.1\|1846554_1847838_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	9.4e-102	49.1
WP_014253331.1\|1849930_1850536_-	TIGR00730 family Rossman fold protein	A0A1V0S9E9	Catovirus	5.7e-09	25.9
WP_041733750.1\|1850513_1851152_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_014253333.1\|1851433_1852855_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_014253334.1\|1852976_1853435_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_014253335.1\|1853465_1853777_+	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_014253336.1\|1853961_1854588_+	cysteine hydrolase	NA	NA	NA	NA
WP_081478317.1\|1854588_1854717_+	CGNR zinc finger domain-containing protein	NA	NA	NA	NA
WP_014253337.1\|1854727_1855714_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_014253338.1\|1855858_1856500_+	HD domain-containing protein	NA	NA	NA	NA
WP_041733752.1\|1856837_1857365_+	Tautomerase enzyme	NA	NA	NA	NA
WP_041733753.1\|1858238_1858871_-	hypothetical protein	NA	NA	NA	NA
WP_041734106.1\|1859385_1859655_-	DUF1488 family protein	NA	NA	NA	NA
WP_148276364.1\|1859726_1860896_-\|integrase	tyrosine-type recombinase/integrase	A0A166YH27	Gordonia_phage	2.0e-05	27.8
WP_175582580.1\|1861536_1861809_+	hypothetical protein	NA	NA	NA	NA
WP_014253342.1\|1863072_1864269_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_014253343.1\|1864395_1865256_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_041733755.1\|1865416_1865731_+	DUF4148 domain-containing protein	NA	NA	NA	NA
WP_014253344.1\|1866010_1867489_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_014253346.1\|1868341_1870390_+	FUSC family protein	NA	NA	NA	NA
WP_014253347.1\|1870584_1871349_+	SDR family oxidoreductase	V5L4T3	Hirudovirus	8.3e-05	33.1
WP_014253348.1\|1871362_1872061_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_041733757.1\|1872105_1872579_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	3.9e-05	44.1
WP_148276330.1\|1872547_1872910_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_014253350.1\|1872943_1874458_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.7e-70	35.4
WP_014253351.1\|1874705_1875626_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014253352.1\|1875865_1876861_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	9.8e-06	25.9
WP_014253353.1\|1876935_1877841_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_050878695.1\|1878462_1880118_-	MFS transporter	Q6JIH2	Burkholderia_virus	4.9e-34	33.6
WP_014253355.1\|1880467_1881886_-	MmgE/PrpD family protein	NA	NA	NA	NA
WP_041733760.1\|1881900_1883073_-	thiolase family protein	NA	NA	NA	NA
WP_148276331.1\|1884046_1884418_-	nitroreductase family protein	NA	NA	NA	NA
WP_041733748.1\|1884521_1885805_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	9.4e-102	49.1
WP_014253359.1\|1885887_1886208_-	nitroreductase family protein	NA	NA	NA	NA
1884479:1885920	attR	NA	NA	NA	NA
WP_014253360.1\|1886204_1887434_-	CoA transferase	NA	NA	NA	NA
WP_148276365.1\|1887517_1888777_-	MFS transporter	Q6JIH2	Burkholderia_virus	1.6e-45	30.7
WP_175582581.1\|1890074_1890242_+	hypothetical protein	NA	NA	NA	NA
WP_014253363.1\|1890462_1891467_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014253364.1\|1891879_1892737_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_014253365.1\|1893124_1893988_-	isocitrate lyase/PEP mutase family protein	NA	NA	NA	NA
WP_041733764.1\|1894005_1894524_-	3-isopropylmalate dehydratase	NA	NA	NA	NA
WP_014253366.1\|1894532_1895789_-	3-isopropylmalate dehydratase	NA	NA	NA	NA
WP_014253367.1\|1896002_1896896_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014253368.1\|1897045_1897465_+	ester cyclase	NA	NA	NA	NA
WP_148276332.1\|1898380_1899374_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_014253371.1\|1900195_1903339_-	error-prone DNA polymerase	A0A0K1Y8T6	Streptomyces_phage	2.0e-89	27.0
WP_014253372.1\|1903343_1904816_-	DNA polymerase Y family protein	NA	NA	NA	NA
WP_014253373.1\|1904739_1905447_-	translesion DNA synthesis-associated protein ImuA	NA	NA	NA	NA
WP_014253374.1\|1905902_1906202_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_014253375.1\|1906204_1906789_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_014253376.1\|1906793_1908272_-	DEAD/DEAH box helicase	A0A075DXT4	Acinetobacter_phage	1.6e-65	34.2
WP_050878662.1\|1908353_1908692_-	hypothetical protein	NA	NA	NA	NA
WP_041733767.1\|1908745_1909150_-	hypothetical protein	NA	NA	NA	NA
WP_144404214.1\|1909416_1909875_-	hypothetical protein	NA	NA	NA	NA
WP_014253378.1\|1910036_1910681_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_014253379.1\|1910733_1911894_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.7e-39	37.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_016589

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_016589_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_016589_1

532740-533621

Orphan

Consensus_repeat	Method
GTTTCCTCCGCGTGGGCGGAGATAG	PILER-CR
GTTTCCTCCGCGTGTGCGGAGATAGGCC	CRISPRCasFinder
GTTTCCTCCGCGTGNGCGGAGATAGGCC	CRT

14 spacers

The CRISPR arrays of NC_016589_1

>merge|NC_016589|1|532740-533621|PILER-CR,CRISPRCasFinder,CRT
GTTTGCTCCGTGTGGGCGGAGATAGGCCGTGGTGATGGCTACACAGCTCCCTATCGACAGGGTTTCCTCCGCGTGGGCGGAGATAGGCCGGGACTGGAAGAGTACAAATGCCGCTGGGTCGGGTTTCCTCCGTGTGGGCGGAGATAGGCCCGCCGATTGTGCAGCGCAAACCGCGCCAACGAAGTTTCCTCCGCGTGGGCGGAGATAGGCCCTATCCAAGCGATGAACTGCTCGACGTGGCCGAGGTTCCTCCGCGTGGGCGGAGATAGGCCCCGACACGAAATAAGAATCTGCCGCCGGCCATGGTTTCCTCCGCGTGGGCGGAGATAGGCCCGCCACTTCGTAGTACCGGCGGGGACGTTGTTGGTTTCCTCCGCGTACGCGGAGATAGACCCCGTCATTCGCGCGATACATCGCGAGCATGAGCGTTTCCTCCGCGTGCGCGGAGATAGACCGCCGTAGGACTTCGCGCACGTGACTGTCCCGCGGTTTCCTCCGCGTGTGCGGAGATAGGCCTACATGCTGTCGAGCATCATTGAGATGTGGGGCGTTTCCTCCGCGTGTGCGGAGATAGGCCTCGGTCGCGAGCTGGTACACGGCGGCCGGTGGAGTTTCCTCCGCGTGTGCGGAGATAGGCCGTCCTCGACGCGGGTACCCCGACCGACTTCTTCGTTTCCTCCGCGTGCGCGGAGATAGGCCTCCGTGAGAGGCAAGCTCCACGGGCGTTAGCGAGTTTCCTCCGCGTACGCGGAGATAGGCCCCAGTAGACTCGGCGCGCGCCACCGAAGAAACCGTTTCCTCCGCGTGCGCGGAGACAGGCCGTGAACGGGAGGTCATTTTTCACGATTCGCGGTGTTTCCTCCGCCTGCAGAGACACCCCCG

>NC_016589|1|1|532740-533557|PILER-CR
GTTTGCTCCGTGTGGGCGGAGATAG	GCCGTGGTGATGGCTACACAGCTCCCTATCGACAGG
GTTTCCTCCGCGTGGGCGGAGATAG	GCCGGGACTGGAAGAGTACAAATGCCGCTGGGTCGG
GTTTCCTCCGTGTGGGCGGAGATAG	GCCCGCCGATTGTGCAGCGCAAACCGCGCCAACGAA
GTTTCCTCCGCGTGGGCGGAGATAG	GCCCTATCCAAGCGATGAACTGCTCGACGTGGCCGA
GGTTCCTCCGCGTGGGCGGAGATAG	GCCCCGACACGAAATAAGAATCTGCCGCCGGCCATG
GTTTCCTCCGCGTGGGCGGAGATAG	GCCCGCCACTTCGTAGTACCGGCGGGGACGTTGTTG
GTTTCCTCCGCGTACGCGGAGATAG	ACCCCGTCATTCGCGCGATACATCGCGAGCATGAGC
GTTTCCTCCGCGTGCGCGGAGATAG	ACCGCCGTAGGACTTCGCGCACGTGACTGTCCCGCG
GTTTCCTCCGCGTGTGCGGAGATAG	GCCTACATGCTGTCGAGCATCATTGAGATGTGGGGC
GTTTCCTCCGCGTGTGCGGAGATAG	GCCTCGGTCGCGAGCTGGTACACGGCGGCCGGTGGA
GTTTCCTCCGCGTGTGCGGAGATAG	GCCGTCCTCGACGCGGGTACCCCGACCGACTTCTTC
GTTTCCTCCGCGTGCGCGGAGATAG	GCCTCCGTGAGAGGCAAGCTCCACGGGCGTTAGCGA
GTTTCCTCCGCGTACGCGGAGATAG	GCCCCAGTAGACTCGGCGCGCGCCACCGAAGAAACC
GTTTCCTCCGCGTGCGCGGAGACAG

>NC_016589|1|1|532740-533560|CRISPRCasFinder
GTTTGCTCCGTGTGGGCGGAGATAGGCC	GTGGTGATGGCTACACAGCTCCCTATCGACAGG
GTTTCCTCCGCGTGGGCGGAGATAGGCC	GGGACTGGAAGAGTACAAATGCCGCTGGGTCGG
GTTTCCTCCGTGTGGGCGGAGATAGGCC	CGCCGATTGTGCAGCGCAAACCGCGCCAACGAA
GTTTCCTCCGCGTGGGCGGAGATAGGCC	CTATCCAAGCGATGAACTGCTCGACGTGGCCGA
GGTTCCTCCGCGTGGGCGGAGATAGGCC	CCGACACGAAATAAGAATCTGCCGCCGGCCATG
GTTTCCTCCGCGTGGGCGGAGATAGGCC	CGCCACTTCGTAGTACCGGCGGGGACGTTGTTG
GTTTCCTCCGCGTACGCGGAGATAGACC	CCGTCATTCGCGCGATACATCGCGAGCATGAGC
GTTTCCTCCGCGTGCGCGGAGATAGACC	GCCGTAGGACTTCGCGCACGTGACTGTCCCGCG
GTTTCCTCCGCGTGTGCGGAGATAGGCC	TACATGCTGTCGAGCATCATTGAGATGTGGGGC
GTTTCCTCCGCGTGTGCGGAGATAGGCC	TCGGTCGCGAGCTGGTACACGGCGGCCGGTGGA
GTTTCCTCCGCGTGTGCGGAGATAGGCC	GTCCTCGACGCGGGTACCCCGACCGACTTCTTC
GTTTCCTCCGCGTGCGCGGAGATAGGCC	TCCGTGAGAGGCAAGCTCCACGGGCGTTAGCGA
GTTTCCTCCGCGTACGCGGAGATAGGCC	CCAGTAGACTCGGCGCGCGCCACCGAAGAAACC
GTTTCCTCCGCGTGCGCGGAGACAGGCC

>NC_016589|1|1|532740-533621|CRT
GTTTGCTCCGTGTGGGCGGAGATAGGCC	GTGGTGATGGCTACACAGCTCCCTATCGACAGG
GTTTCCTCCGCGTGGGCGGAGATAGGCC	GGGACTGGAAGAGTACAAATGCCGCTGGGTCGG
GTTTCCTCCGTGTGGGCGGAGATAGGCC	CGCCGATTGTGCAGCGCAAACCGCGCCAACGAA
GTTTCCTCCGCGTGGGCGGAGATAGGCC	CTATCCAAGCGATGAACTGCTCGACGTGGCCGA
GGTTCCTCCGCGTGGGCGGAGATAGGCC	CCGACACGAAATAAGAATCTGCCGCCGGCCATG
GTTTCCTCCGCGTGGGCGGAGATAGGCC	CGCCACTTCGTAGTACCGGCGGGGACGTTGTTG
GTTTCCTCCGCGTACGCGGAGATAGACC	CCGTCATTCGCGCGATACATCGCGAGCATGAGC
GTTTCCTCCGCGTGCGCGGAGATAGACC	GCCGTAGGACTTCGCGCACGTGACTGTCCCGCG
GTTTCCTCCGCGTGTGCGGAGATAGGCC	TACATGCTGTCGAGCATCATTGAGATGTGGGGC
GTTTCCTCCGCGTGTGCGGAGATAGGCC	TCGGTCGCGAGCTGGTACACGGCGGCCGGTGGA
GTTTCCTCCGCGTGTGCGGAGATAGGCC	GTCCTCGACGCGGGTACCCCGACCGACTTCTTC
GTTTCCTCCGCGTGCGCGGAGATAGGCC	TCCGTGAGAGGCAAGCTCCACGGGCGTTAGCGA
GTTTCCTCCGCGTACGCGGAGATAGGCC	CCAGTAGACTCGGCGCGCGCCACCGAAGAAACC
GTTTCCTCCGCGTGCGCGGAGACAGGCC	GTGAACGGGAGGTCATTTTTCACGATTCGCGGT
GTTTCCTCCGCCTGCAGAGACACCCCCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_016589.1\|WP_014190554.1\|540906_541398_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372685
NC_016589.1\|WP_014190543.1\|526107_527544_+\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
NC_016589.1\|WP_014190558.1\|543879_544509_+\|cysteine-hydrolase	unknown	unknown	gnl\|CDD\|238496
NC_016589.1\|WP_014190556.1\|541994_542798_+\|carbon-monoxide-dehydrogenase-subunit-G	unknown	unknown	gnl\|CDD\|176853
NC_016589.1\|WP_014190546.1\|529845_530358_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|376377
NC_016589.1\|WP_014190549.1\|533744_534851_-\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|238883
NC_016589.1\|WP_014190548.1\|531640_532663_+\|threonylcarbamoyl-AMP-synthase	unknown	unknown	gnl\|CDD\|223088
NC_016589.1\|WP_014190540.1\|523137_523884_+\|AzlC-family-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215
NC_016589.1\|WP_014190555.1\|541542_541920_+\|DUF427-domain-containing-protein	unknown	unknown	gnl\|CDD\|377265
NC_016589.1\|WP_075644198.1\|521823_522744_-\|branched-chain-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|235841
NC_016589.1\|WP_014190541.1\|523880_524204_+\|AzlD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377512
NC_016589.1\|WP_014190545.1\|528943_529834_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|237571
NC_016589.1\|WP_041730153.1\|535083_536679_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|224938
NC_016589.1\|WP_014190553.1\|539249_540767_+\|DegQ-family-serine-endoprotease	unknown	unknown	gnl\|CDD\|273938
NC_016589.1\|WP_014190552.1\|537600_538902_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|182388
NC_016589.1\|WP_014190547.1\|530428_531616_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
NC_016589.1\|WP_014190542.1\|524564_525761_+\|phosphoglycerate-kinase	unknown	unknown	gnl\|CDD\|234613
NC_016589.1\|WP_014190551.1\|536938_537601_+\|response-regulator	unknown	unknown	gnl\|CDD\|182612
NC_016589.1\|WP_050878262.1\|542794_543751_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|181818
NC_016589.1\|WP_014190544.1\|527722_528787_+\|fructose-bisphosphate-aldolase-class-II	unknown	unknown	gnl\|CDD\|181691

Protein	Function_ID	Function_description	E-value
NC_016589.1\|WP_014190554.1\|540906_541398_+\|hypothetical-protein	gnl\|CDD\|372685	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.	0.00052394
NC_016589.1\|WP_014190543.1\|526107_527544_+\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
NC_016589.1\|WP_014190558.1\|543879_544509_+\|cysteine-hydrolase	gnl\|CDD\|238496	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.	2.60382e-56
NC_016589.1\|WP_014190556.1\|541994_542798_+\|carbon-monoxide-dehydrogenase-subunit-G	gnl\|CDD\|176853	cd05018, CoxG, Carbon monoxide dehydrogenase subunit G (CoxG). CoxG has been shown, in Oligotropha carboxidovorans, to anchor the carbon monoxide (CO) dehydrogenase to the cytoplasmic membrane. The gene encoding CoxG is part of the Cox cluster (coxBCMSLDEFGHIK) located on a low-copy-number, circular, megaplasmid pHCG3. This cluster includes genes encoding subunits of CO dehydrogenase and several accessory components involved in the utilization of CO. This family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands.	4.20639e-18
NC_016589.1\|WP_014190546.1\|529845_530358_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|376377	pfam00731, AIRC, AIR carboxylase. Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.	9.02083e-83
NC_016589.1\|WP_014190549.1\|533744_534851_-\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|238883	cd01847, Triacylglycerol_lipase_like, Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.	5.9819e-54
NC_016589.1\|WP_014190548.1\|531640_532663_+\|threonylcarbamoyl-AMP-synthase	gnl\|CDD\|223088	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis].	7.45236e-70
NC_016589.1\|WP_014190540.1\|523137_523884_+\|AzlC-family-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	1.77509e-43
NC_016589.1\|WP_014190555.1\|541542_541920_+\|DUF427-domain-containing-protein	gnl\|CDD\|377265	pfam04248, NTP_transf_9, Domain of unknown function (DUF427). This domain contains a beta-tent fold.	2.72591e-39
NC_016589.1\|WP_075644198.1\|521823_522744_-\|branched-chain-amino-acid-transaminase	gnl\|CDD\|235841	PRK06606, PRK06606, branched-chain amino acid transaminase.	0
NC_016589.1\|WP_014190541.1\|523880_524204_+\|AzlD-domain-containing-protein	gnl\|CDD\|377512	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD). This family consists of a number of bacterial and archaeal branched-chain amino acid transport proteins. AzlD is known to be involved in conferring resistance to 4-azaleucine although its exact role is uncertain.	3.5555e-18
NC_016589.1\|WP_014190545.1\|528943_529834_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|237571	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional.	0
NC_016589.1\|WP_041730153.1\|535083_536679_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|224938	COG2027, DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) [Cell envelope biogenesis, outer membrane].	1.68094e-107
NC_016589.1\|WP_014190553.1\|539249_540767_+\|DegQ-family-serine-endoprotease	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	2.92141e-178
NC_016589.1\|WP_014190552.1\|537600_538902_+\|HAMP-domain-containing-protein	gnl\|CDD\|182388	PRK10337, PRK10337, sensor protein QseC; Provisional.	1.65637e-74
NC_016589.1\|WP_014190547.1\|530428_531616_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	0
NC_016589.1\|WP_014190542.1\|524564_525761_+\|phosphoglycerate-kinase	gnl\|CDD\|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NC_016589.1\|WP_014190551.1\|536938_537601_+\|response-regulator	gnl\|CDD\|182612	PRK10643, PRK10643, two-component system response regulator PmrA.	3.5317e-83
NC_016589.1\|WP_050878262.1\|542794_543751_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|181818	PRK09393, ftrA, transcriptional activator FtrA; Provisional.	9.28705e-130
NC_016589.1\|WP_014190544.1\|527722_528787_+\|fructose-bisphosphate-aldolase-class-II	gnl\|CDD\|181691	PRK09196, PRK09196, fructose-bisphosphate aldolase class II.	0

>NC_016589.1|WP_014190548.1|531640_532663_+|threonylcarbamoyl-AMP-synthase
MTIIYPGAAQIDEAAALLDAGELVAFPTETVYGLGGDAENPDAIARIYAAKGRPANHPVIVHLAPEADPGYWVREMPADAQKLIDAFWPGPLTLILKRAAHIPAAVSGGQDSVGVRCPSHPVAQQLLSAFHARRLGTGKQGGVAGPSANRFGHVSPTTAQHVRDEFGGAVHVLDGGAADVGIESTILDLSRGFPALLRPGHVSPQQIADVIGIAPRLPDGSDATAPRASGTLKAHYAPRTPLVLLPFSAMEPLLRRDGDRKIALVARASSAGEWARASHVHFVAAPEDPQSYARDLYGLLRALDRANVERILIEKLPETVEWIAVNDRLGRAAAAFEAEE
>NC_016589.1|WP_014190547.1|530428_531616_+|5-(carboxyamino)imidazole-ribonucleotide-synthase
MNPQNSPISPILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDETSPAGAVADRHIRAAYDDRAALTELGRLCAAVSTEFENVPSASLEFLASCTFVSPAASCVAIAQDRVAEKRFIAESGVPVAPHVVIESADALAAIPDEKIAAVLPGILKTARMGYDGKGQVNVRNVDEVRHAHASLSGVPCVLEKRMPLKYEVSVLIARGGDGKSAVFPLAQNVHTSGILAKTVVPAPDASAALVAQAQDAALTIAAKLGYVGVLCVEFFVLEDGSLIANEMAPRPHNSGHYTVDACATSQFEQQVRAMTGMPLGDTRQHSPAAMLNLLGDIWFDGNKARAPAWAEVAAMPSARLHLYGKEEARRGRKMGHINFTAATLEEARTAARDCARMLHITID
>NC_016589.1|WP_014190546.1|529845_530358_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MTNEVHTHKAPLVGVLMGSSSDWDVMKNAVAILQEFGVPYEAKVVSAHRMPDEMFAYAESARERGVRAIIAGAGGAAHLPGMLAAKTTLPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSILSATDSKYADALAAFRVKQNQAARDMALPPL
>NC_016589.1|WP_014190545.1|528943_529834_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MSTLYESTIKSLPLLGRGKVRDNYAVGQDKLLIVTTDRLSAFDVVMGEPIPNKGRVLNTMADFWFEKLGHIVPNHNTGIDPATVVAPGEAEQVKGRAVVVKRLEPILVEAVVRGYLAGSGWKDYQATGSVCGVELPPGLQNAQKLPEPIFTPAAKAEMGHHDENITYDEMERRIGTELSATIKRISIQLYEEAAAYAATRGIIIADTKFEFGLDDKGELYLMDEVLTADSSRFWPADGYQVGTNPPSFDKQFVRDWLETQPWKKEPPAPKLPDDVIARTSEKYQEALQRLTGKTLD
>NC_016589.1|WP_014190544.1|527722_528787_+|fructose-bisphosphate-aldolase-class-II
MPLVSMRQLLDHAAEHGYGLPAFNVNNLEQVQAIMSAANEVNAPVIMQASAGARKYAGEAFLRHLIEAAVESYPHIPVVMHQDHGQSPAVCMAAIRSGFTSVMMDGSLEADGKTVASYEYNVAVSKQVVEFSHSIGVTVEAELGVLGSLETMKGDKEDGHGAEGTMTREQLLTDVEQAADFVKQTQCDALAIAIGTSHGAYKFSKKPTGDILAIDRIREIHQRIPNTHLVMHGSSSVPQELLAEIREFGGDMKETYGVPVEEIQEGIKHGVRKVNIDTDLRLAITGAIRRYLFENPSKFDPRDYLKPAREAAKEICRQRYMQFGCEGMAGKIKPVSLDKIAEKYKSGALSQIVK
>NC_016589.1|WP_014190543.1|526107_527544_+|pyruvate-kinase
MHRATKIVATIGPASTSPDILLQMLQAGLDVVRFNFSHGTADDHRQRAEIVREAARQVGREVAIMADLQGPKIRVGKFENNKTMLVAGNPFILDAGCELGNSERVGLDYKDLPRDLRAGDVLLLNDGLIVLDVTRVIGEEIHTTVKVGGELSNNKGINRQGGGLTAPALTEKDMEDIKTAMSLGADFVAVSFPKNATDMEMARQLANIAGAPYGIKPKMIAKIERAEAIPALQGILDASDGIMVARGDLAVEVGNAAVPALQKRMIRMARESNKLVITATQMMESMIHAPVPTRAEVSDVANAVLDGTDAVMLSAETAAGKYPVTTIETMAAVCIEAEKSEESQLDRDFLDRTFTRIDQSIAMGALFTAYHLGAKAVVALTESGSTALWMSRHWTHVPIFALTPRVASERTMSLYRNVTPLHVDTNMDRDAALNSALEVVVSKGYAARGDMVVLTVGEPMGQAGGTNTLKIVRVGDHF
>NC_016589.1|WP_014190542.1|524564_525761_+|phosphoglycerate-kinase
MTKVLRFTDLIAEGKVSGKRVFIRADLNVPQDDDGNITEDTRVRASVPAIKAALDAGAAVMVTSHLGRPTEGQFKPEDSLAPVAKRLSELLGRDVPLVADWVDGVSVQPGNVVLLENCRVNKGEKKNDDGLAQKLAKLCDVYVNDAFGTAHRAEATTHGIAKYAPVACAGPLLAAELDALGKALGNPKRPLVAIVAGSKVSTKLTILKSLAEKVDQLIVGGGIANTFMLASGLKIGKSLAEADLLGEAKEIIEQARTRGASVPIPSDVVTAKEFAPTAKAQTKPVADVADDDMILDIGPDTAKALAAQLETAGTIVWNGPVGVFEFDQFGNGTKTLAAAIANSSAFSIAGGGDTLAAIAKYDIADKVSYISTGGGAFLEFLEGKTLPAVEVLESRAGA
>NC_016589.1|WP_014190541.1|523880_524204_+|AzlD-domain-containing-protein
MSTLQVWLAIIGMGLVTAVTRALFLIGGERMVLPPRVQRVLRYAPAAALAGVVVPDLLATPSGISLGLGNHALWASVAGLAYYLKRRGMMGTIAVGMIVFTVLRLAA
>NC_016589.1|WP_014190540.1|523137_523884_+|AzlC-family-ABC-transporter-permease
MPDRLSDTNRRAFFEGARTFSPAVLATFSWGLVTGVAMTKSVLTVPQALGMSFLVYAGSSQLAVLPLFAAKLPLWTVLLTAAMVNLRFVIFSAGLAPHFAYLSLRRRLLLGYFNGDIIYLMFSKRNFPAGWQPGKEAFFWGLAVSSWLSWQVSSVLGILLASLIPDNWGLELAGTLALIPLIVSAIATRSTLAAVAVASVVALLTFDLPYRFGLPLAVFAALIAGTLADVIAEKRDKRNKPAASGNTR
>NC_016589.1|WP_075644198.1|521823_522744_-|branched-chain-amino-acid-transaminase
MSMADRDGKIWMDGKLIDWRDAKIHVLTHTLHYGMGVFEGVRAYKTAQGTAIFRLKEHTKRLLNSAKIFQMDVPFDAATLEAAQLEVVKANELESCYIRPIIWVGSEKLGVSAKGNTIHVAIAAWPWGAYLGEDGLAKGIRVKTSSFTRHHVNVSMVRAKASGWYVNSILANQEAVADGYDEALLLDVDGYVSEGSGENFFLVNNGKIYTPDLASCLDGITRDTVITLARDFGIPVIEKRITRDEVYTCDEAFFTGTAAEVTPIRELDNRTIGSGARGPITEKLQSAFFDVVGGKNEKYASWLAKV
>NC_016589.1|WP_014190549.1|533744_534851_-|SGNH/GDSL-hydrolase-family-protein
MKKQRSMRAALTRFAQVATASAAFALIAACGGGGDANNSTPPGGVKLQIVSFGDSLSDVGTYAPVAAANFGGGRFTTNPGQVWVQNVAQYYGDTLTPAMTGGFGVPPAAQSGLGYAQGGALVTNPIGINHVSNDPANYQGALTVPVVQQVTNYLSAHGSFNSNQLVIVNGGGNDILYNFQLAQTGAITPAQASAAIGKAAIDLAGIIGKVLQSGATHVLVSNVPDIGTTPQGMMSSAANRALLTQASLGFNQALAGALTQAGLMSKVIYLDIVPVLANVTANFGQFGFTVSNTGTACNLQAMAAAAQKFGEPNPAAFATSLFCSPETLTVAGADQTYMYADTVHPTTHLGALYAQAAEQVVAKSGLGK
>NC_016589.1|WP_041730153.1|535083_536679_-|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MPLASRFASRRLSSFALAAVLACAALGPAPAAFARGGTKAESQAQSPERAAKGKRAAKNGKAARVAKASVPAGPLPASVMTALARAHVPLSSMSVVVQRIGAPTPLVSINANEPMLPASTMKLVTTYAGLSILGPDYRWKTTAYADGQIDTQGVLRGNLYIQGTGDPKLVPEELIDLVDQIRKNGITGIDGALVLDKRYFDASTRDLPAFDNDDSAPYNVGPDPLLYAFKSLSFTLTPNADGQVAIDVLPQLAQLQIDNELRVTRGACVGSLSAASPSVAQTQGGFVQASFIGDYPLRCGSRTVNVAALDHSTFFAGGFLALWKQAGGTFQGATREGPTPSGARLVGTHRSPVLSDVVRDINKFSNNVMARNLFLTIGAAQLKPPATTAKSAAAIQSFLKRSALPMNGLALDNGSGLSRDEHISAASLADLLQAANASPVAQVFVESLPIAGVDGTMRNRLTNAGAFGNAHIKTGTLRDVRAIAGYVGAANGESYVIVSFINDPRAEAARAAHDALLEWVYEGARKADLAE
>NC_016589.1|WP_014190551.1|536938_537601_+|response-regulator
MRILLVEDDRMIAEGVRKALRADGFAVDWVQDGEAALTAVAGESYDLMLLDLGLPKRDGLDVLKTLRARANALPVLIVTARDAIADRVKGLDAGADDYLVKPFDLDELGARMRALIRRHAGRGESLVRHGELTLDPVGHQVTLAGNPVALSAREFALLEALMARPGAVLSKSQLEEKIYGWGEEIGSNTVEVYIHSLRKKLGADLIRNVRGLGYMVAKDA
>NC_016589.1|WP_014190552.1|537600_538902_+|HAMP-domain-containing-protein
MRSIRRQLLIWLLALVIVGVGFAGWLIYRQALAEANELFDYQLQQIAAALPSEPFSSVLSSRSESDEGVVIQIWNRNGVLMYYSHPRVPLAPHAELGFSTEMTPRGEWRVYSAIVGDNVVQLAQPLSIRNRVAAGVAWRTLWPLVLLLPLLGVAIWVIVGRGLAPLQRVTRALDTRHPEALDPLSDQRLPQEVRPVVRALNALLSRLSAALDTQKAFVADAAHELRTPLAAVQIQAQLVGRAQDDDTRREALADLNEGIARATRLAEQLLALARSEPDGKAVETRVDLDELLEGCVRGYVLVAQERGVDLGIEASESASVKGDPDSLRVMFNNLIDNATKYTPKGGRVDVCVKLEGGHPLVEIADTGPGIPGEERERVFDRFYRVGEGVNRPRTDVAGSGLGLAIVRRIAVQHGASVSLGESDAGGLKVAVRF
>NC_016589.1|WP_014190553.1|539249_540767_+|DegQ-family-serine-endoprotease
MKAKILTRSAVAAAVAVALSAGYVAGHNNVPAPQVIAPAQAAALMPAEAAAKTGIPDFSGLVETYGPAVVNISAKHVVKETSARSSRNQLPMDPDDPLYQFFKRFGGFPGFGGGQGGPGGPGADRPSEGLGSGFIVSSDGYILTNAHVVDNANVVTVKLTDKREYRAKVIGADKQSDVAVLKIDAKDLPTVKIGDPNGSKVGQWVVAIGSPYGFDNTVTSGIISAKSRALPNENYTPFIQTDVPVNPGNSGGPLFNLQGEVIGINSMIYSQTGGFQGLSFAIPINEAIKVKDALIKTGHVDRGRLGVTVQGMNQTLANSFGMKSPQGALVSSVEPGGPAAKAGLQPGDVITALNGVPVSDSTSLPSQVAGLSPGSSAKVTVWRDKSAKDLSVTIGALKDAKTASAKTGAGGDEASAQDARLGVAVRPLTPEEKQNDSLSRGLLVQQSGGAAASAGIQPGDVILAVNGQPVTSVQQLKSMVEHAGDSIALLIQRDDAQIFVPVDLG
>NC_016589.1|WP_014190554.1|540906_541398_+|hypothetical-protein
MTNKTTGRLAAALVVAAMSAGMTGGAWAQASGTTGGTTADTSSAGNTNGGGLPQVQQQGDVSYTSGGVGLDESRALLREQAHWPLSLRFTGPTAEYLSGVTVRIAGGKGGDVLSTEAMGPYMLVKLPPGNYTVYAKYKDQEKKQSVNVSGPGKAKAAFHWNIQ
>NC_016589.1|WP_014190555.1|541542_541920_+|DUF427-domain-containing-protein
MGTELKDGHEAAHGIEITLNGRRCRVIHQGVTYADTHASFTLVEAGAEKVHYFPRADVNMARLERSIHTTHCPMKGQATHYHLLTEDGPIENAAWSYEAPLDAAVKIKGYLAFYGSRVDRIDETS
>NC_016589.1|WP_014190556.1|541994_542798_+|carbon-monoxide-dehydrogenase-subunit-G
MEVTDALRVPLDPAHVRDALGDLALLRASLDNCESFTRTPGGEYVLTLIVPLGALRARYEIRAHAAGRTRQAAHAEGEPAEPADAADTAYARTLSFKARGEGVGSLRGQIAVALNPDEDDSDSTWIEYTVWATVSGPLAGLPSRQIENALREGADDFFAEFCEVVRAKHGLPSMRAAGENAARRHVFLRPSSMSAAFSRRPGAMRAPSADAHASGVLRHRLHGHGFVHHDRDHSHDPHPLGLPAWAWAAMLVCIALFAYLAQHVGLG
>NC_016589.1|WP_050878262.1|542794_543751_-|helix-turn-helix-domain-containing-protein
MNRHSIAVVAFDRISPFHLAVPCIVFGEERGGIGVPPFDFRVCAAEPRALATSAGFTIATLHSLDALDSADVVIVPSWRDPAETPPDALLDALRAAHARGARIVGLCLGSYVLAAAGLLDGRAATTHWAWADDFARRYPRVRLDPNVLYIDDENITTSAGTAAGLDCCLHVLRALAGSHAANQVARRLVVPPHRQGSQAQFIDEPLPGRANGEKLAGLLDWLRANLQTDHSLDALAARMAMSRRNFTRRFRQTTGTTVGAWLVGQRVALAQRLLEDTDLPVDRIAQTCGFGTGATLRQQFAQTLKTSPSAYRRAFRGV
>NC_016589.1|WP_014190558.1|543879_544509_+|cysteine-hydrolase
MPRRALIVIDVQNEYVEGNLLIEYPDVNVSLANIGRAMDAAQKHGVPVVVVQNFAPESAPIFARGSAMAQLHETVASRPRAHYVEKSLPSAFAGTDLADWLTANDIDTIVIAGYMTHNCDDSTVKHAVHAGLSVEFLADATGAVPYENRAGKASAEEIHRVFTVVMQSRFAAVLSTDEWLAALESGEPPARDNIYASNQRARAGSAASR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_016589_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_016589_2

733742-734927

Orphan

Consensus_repeat	Method
GGTCTATCTCCGCGCACGCGGAGGAATC	CRISPRCasFinder
GGNCTATCTCCGCGCACGCGGAGGAA	CRT
GATTCCTCCGCGTGCGCGGAGATAGACC	PILER-CR

19 spacers

The CRISPR arrays of NC_016589_2

>merge|NC_016589|2|733742-734927|CRISPRCasFinder,CRT,PILER-CR
GGTCAATCTCCGCGCAGGTGGAGGAAACCAAGGAGTCAGCGAGACGACCCTTCGCCGCGAGGGCCTATCTCCGCGCACGCGGAGGAAACGCGCAGTCGCGCATCGTGGCGTTAAGTGCCGAGGGCCTATCTCCGCGCACGCGGAGGAAACTTCACGAATCTGCCGGCATCCCGCGACGATGGGGGCCTATCTCCGCGCACGCGGAGGAAACATCACTGGCTCTTGGGCGTGCTGACGATGCGCGGGCCTATCTCCGCGCACGCGGAGGAAACGGCGCGAGATTCAGCAATTCTTCATCGCTCGCGGGCCTATCTCCGCGCACCCGGAGGAAGCCGACAACCGAGAGGAACACGAAGTCGTGAACAAGGCCTATCTCCGCGCACGCGGAGGAATCTTTTTATTTCGCGAACAAGTCTCCCTGTCCAGGGCCTATCTCCGCGCACGCGGAGGAATCGCGATCGCACCGGCGTCGATGAAGACCGTCAACGGCCTATCTCCGCGCACGCGGAGGAATCCAAGCGGCTAACTCACAATATTTCCGATAATCGGGTCTATCTCCGCGTACGCGGAGGAATCTCGCTCCACGATTGGCCGAGATTCCACACGCTGGGTCTATCTCCGCGCACGCGGAGGAATCTCAAGTGCTGCTTATTCATCGATCACTCCACGCGGTCTATCTCCGCGCACGCGGAGGAATCGAAATCGCCTTCCCGTCCGCGCAGGAAAACGACGGTCTATCTCCGCGCACGCGGAGGAATCGGTGCAGACGTGGACCGCGTGAGGATGACGCCGGGTCTATCTCCGCGCACGCGGAGGAATCGGTCTGGTCCGCCTGAATGTCCCTCACTCTGCCGGTCTATCTCCGCGCACGCGGAAGAATCACGTCATCGGGGCTCTGCAAGCCATCGTACAAAGGTCTATCTCCGCGCACGCGGAGGAATCCGCCTCGCCCGCCCGCGTATCGAGCGCGACGCCGGTCTATCTCCGCGCACGCGGAGGAATCCTCTGGACGAGGTGGACAATGCGGTCATGGTGCGGTCTATCTCCGCGCACGCGGAGGAATCCGCGAAGATCGCGGTCCAGGCGGGCGTCAGATAGGTCTATCTCCGCGCACGCGGAGGAATCGCTTCCTTGCCGACGTGTCCCGTGAGCACCGCGGGTCTATCTCCGCGCACGCGGAGGAATC

>NC_016589|2|2|733742-734927|CRISPRCasFinder
GGTCAATCTCCGCGCAGGTGGAGGAAAC	CAAGGAGTCAGCGAGACGACCCTTCGCCGCGAG
GGCCTATCTCCGCGCACGCGGAGGAAAC	GCGCAGTCGCGCATCGTGGCGTTAAGTGCCGAG
GGCCTATCTCCGCGCACGCGGAGGAAAC	TTCACGAATCTGCCGGCATCCCGCGACGATGGG
GGCCTATCTCCGCGCACGCGGAGGAAAC	ATCACTGGCTCTTGGGCGTGCTGACGATGCGCG
GGCCTATCTCCGCGCACGCGGAGGAAAC	GGCGCGAGATTCAGCAATTCTTCATCGCTCGCG
GGCCTATCTCCGCGCACCCGGAGGAAGC	CGACAACCGAGAGGAACACGAAGTCGTGAACAA
GGCCTATCTCCGCGCACGCGGAGGAATC	TTTTTATTTCGCGAACAAGTCTCCCTGTCCAG
GGCCTATCTCCGCGCACGCGGAGGAATC	GCGATCGCACCGGCGTCGATGAAGACCGTCAAC
GGCCTATCTCCGCGCACGCGGAGGAATC	CAAGCGGCTAACTCACAATATTTCCGATAATCG
GGTCTATCTCCGCGTACGCGGAGGAATC	TCGCTCCACGATTGGCCGAGATTCCACACGCTG
GGTCTATCTCCGCGCACGCGGAGGAATC	TCAAGTGCTGCTTATTCATCGATCACTCCACGC
GGTCTATCTCCGCGCACGCGGAGGAATC	GAAATCGCCTTCCCGTCCGCGCAGGAAAACGAC
GGTCTATCTCCGCGCACGCGGAGGAATC	GGTGCAGACGTGGACCGCGTGAGGATGACGCCG
GGTCTATCTCCGCGCACGCGGAGGAATC	GGTCTGGTCCGCCTGAATGTCCCTCACTCTGCC
GGTCTATCTCCGCGCACGCGGAAGAATC	ACGTCATCGGGGCTCTGCAAGCCATCGTACAAA
GGTCTATCTCCGCGCACGCGGAGGAATC	CGCCTCGCCCGCCCGCGTATCGAGCGCGACGCC
GGTCTATCTCCGCGCACGCGGAGGAATC	CTCTGGACGAGGTGGACAATGCGGTCATGGTGC
GGTCTATCTCCGCGCACGCGGAGGAATC	CGCGAAGATCGCGGTCCAGGCGGGCGTCAGATA
GGTCTATCTCCGCGCACGCGGAGGAATC	GCTTCCTTGCCGACGTGTCCCGTGAGCACCGCG
GGTCTATCTCCGCGCACGCGGAGGAATC

>NC_016589|2|2|733742-734925|CRT
GGTCAATCTCCGCGCAGGTGGAGGAA	ACCAAGGAGTCAGCGAGACGACCCTTCGCCGCGAG
GGCCTATCTCCGCGCACGCGGAGGAA	ACGCGCAGTCGCGCATCGTGGCGTTAAGTGCCGAG
GGCCTATCTCCGCGCACGCGGAGGAA	ACTTCACGAATCTGCCGGCATCCCGCGACGATGGG
GGCCTATCTCCGCGCACGCGGAGGAA	ACATCACTGGCTCTTGGGCGTGCTGACGATGCGCG
GGCCTATCTCCGCGCACGCGGAGGAA	ACGGCGCGAGATTCAGCAATTCTTCATCGCTCGCG
GGCCTATCTCCGCGCACCCGGAGGAA	GCCGACAACCGAGAGGAACACGAAGTCGTGAACAA
GGCCTATCTCCGCGCACGCGGAGGAA	TCTTTTTATTTCGCGAACAAGTCTCCCTGTCCAG
GGCCTATCTCCGCGCACGCGGAGGAA	TCGCGATCGCACCGGCGTCGATGAAGACCGTCAAC
GGCCTATCTCCGCGCACGCGGAGGAA	TCCAAGCGGCTAACTCACAATATTTCCGATAATCG
GGTCTATCTCCGCGTACGCGGAGGAA	TCTCGCTCCACGATTGGCCGAGATTCCACACGCTG
GGTCTATCTCCGCGCACGCGGAGGAA	TCTCAAGTGCTGCTTATTCATCGATCACTCCACGC
GGTCTATCTCCGCGCACGCGGAGGAA	TCGAAATCGCCTTCCCGTCCGCGCAGGAAAACGAC
GGTCTATCTCCGCGCACGCGGAGGAA	TCGGTGCAGACGTGGACCGCGTGAGGATGACGCCG
GGTCTATCTCCGCGCACGCGGAGGAA	TCGGTCTGGTCCGCCTGAATGTCCCTCACTCTGCC
GGTCTATCTCCGCGCACGCGGAAGAA	TCACGTCATCGGGGCTCTGCAAGCCATCGTACAAA
GGTCTATCTCCGCGCACGCGGAGGAA	TCCGCCTCGCCCGCCCGCGTATCGAGCGCGACGCC
GGTCTATCTCCGCGCACGCGGAGGAA	TCCTCTGGACGAGGTGGACAATGCGGTCATGGTGC
GGTCTATCTCCGCGCACGCGGAGGAA	TCCGCGAAGATCGCGGTCCAGGCGGGCGTCAGATA
GGTCTATCTCCGCGCACGCGGAGGAA	TCGCTTCCTTGCCGACGTGTCCCGTGAGCACCGCG
GGTCTATCTCCGCGCACGCGGAGGAA

>NC_016589|2|2|733803-734927|PILER-CR
GGCCTATCTCCGCGCACGCGGAGGAAAC	GCGCAGTCGCGCATCGTGGCGTTAAGTGCCGAG
GGCCTATCTCCGCGCACGCGGAGGAAAC	TTCACGAATCTGCCGGCATCCCGCGACGATGGG
GGCCTATCTCCGCGCACGCGGAGGAAAC	ATCACTGGCTCTTGGGCGTGCTGACGATGCGCG
GGCCTATCTCCGCGCACGCGGAGGAAAC	GGCGCGAGATTCAGCAATTCTTCATCGCTCGCG
GGCCTATCTCCGCGCACCCGGAGGAAGC	CGACAACCGAGAGGAACACGAAGTCGTGAACAA
GGCCTATCTCCGCGCACGCGGAGGAATC	TTTTTATTTCGCGAACAAGTCTCCCTGTCCAG
GGCCTATCTCCGCGCACGCGGAGGAATC	GCGATCGCACCGGCGTCGATGAAGACCGTCAAC
GGCCTATCTCCGCGCACGCGGAGGAATC	CAAGCGGCTAACTCACAATATTTCCGATAATCG
GGTCTATCTCCGCGTACGCGGAGGAATC	TCGCTCCACGATTGGCCGAGATTCCACACGCTG
GGTCTATCTCCGCGCACGCGGAGGAATC	TCAAGTGCTGCTTATTCATCGATCACTCCACGC
GGTCTATCTCCGCGCACGCGGAGGAATC	GAAATCGCCTTCCCGTCCGCGCAGGAAAACGAC
GGTCTATCTCCGCGCACGCGGAGGAATC	GGTGCAGACGTGGACCGCGTGAGGATGACGCCG
GGTCTATCTCCGCGCACGCGGAGGAATC	GGTCTGGTCCGCCTGAATGTCCCTCACTCTGCC
GGTCTATCTCCGCGCACGCGGAAGAATC	ACGTCATCGGGGCTCTGCAAGCCATCGTACAAA
GGTCTATCTCCGCGCACGCGGAGGAATC	CGCCTCGCCCGCCCGCGTATCGAGCGCGACGCC
GGTCTATCTCCGCGCACGCGGAGGAATC	CTCTGGACGAGGTGGACAATGCGGTCATGGTGC
GGTCTATCTCCGCGCACGCGGAGGAATC	CGCGAAGATCGCGGTCCAGGCGGGCGTCAGATA
GGTCTATCTCCGCGCACGCGGAGGAATC	GCTTCCTTGCCGACGTGTCCCGTGAGCACCGCG
GGTCTATCTCCGCGCACGCGGAGGAATC

Protein	Signature genes	Signature genes Name	Protein_function
NC_016589.1\|WP_041730193.1\|730667_731984_+\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355
NC_016589.1\|WP_014190714.1\|727066_727978_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NC_016589.1\|WP_014190726.1\|740443_741622_+\|OpgC-domain-containing-protein	unknown	unknown	gnl\|CDD\|378405
NC_016589.1\|WP_006999197.1\|738894_739149_+\|cell-division-topological-specificity-factor-MinE	unknown	unknown	gnl\|CDD\|184442
NC_016589.1\|WP_014190722.1\|737212_737980_+\|septum-site-determining-protein-MinC	unknown	unknown	gnl\|CDD\|234994
NC_016589.1\|WP_041730191.1\|720970_721801_-\|Smr/MutS-family-protein	unknown	unknown	gnl\|CDD\|380164
NC_016589.1\|WP_014190727.1\|741643_742948_-\|MHS-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NC_016589.1\|WP_014190719.1\|734989_735340_-\|hypothetical-protein	unknown	unknown	unknown
NC_016589.1\|WP_085952626.1\|728182_729118_+\|agmatinase	unknown	unknown	gnl\|CDD\|212538
NC_016589.1\|WP_014190711.1\|723335_725651_+\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669
NC_016589.1\|WP_014190725.1\|740014_740194_-\|hypothetical-protein	unknown	unknown	unknown
NC_016589.1\|WP_014190721.1\|736533_737058_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_016589.1\|WP_014190724.1\|739458_739764_+\|YXWGXW-repeat-containing-protein	unknown	unknown	unknown
NC_016589.1\|WP_014190716.1\|729121_730441_-\|putative-hydroxymethylpyrimidine-transporter-CytX	unknown	unknown	gnl\|CDD\|274096
NC_016589.1\|WP_014190723.1\|738069_738885_+\|septum-site-determining-protein-MinD	unknown	unknown	gnl\|CDD\|225447
NC_016589.1\|WP_014190720.1\|735576_736359_+\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NC_016589.1\|WP_014190710.1\|721975_722971_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
NC_016589.1\|WP_144403928.1\|726419_726827_-\|hypothetical-protein	unknown	unknown	unknown
NC_016589.1\|WP_014190718.1\|732125_733424_+\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NC_016589.1\|WP_041730955.1\|725701_726382_+\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|178807

Protein	Function_ID	Function_description	E-value
NC_016589.1\|WP_041730193.1\|730667_731984_+\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NC_016589.1\|WP_014190714.1\|727066_727978_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	3.43995e-31
NC_016589.1\|WP_006999197.1\|738894_739149_+\|cell-division-topological-specificity-factor-MinE	gnl\|CDD\|184442	PRK13989, PRK13989, cell division topological specificity factor MinE; Provisional.	6.35631e-48
NC_016589.1\|WP_014190722.1\|737212_737980_+\|septum-site-determining-protein-MinC	gnl\|CDD\|234994	PRK01973, PRK01973, septum site-determining protein MinC.	1.78756e-148
NC_016589.1\|WP_041730191.1\|720970_721801_-\|Smr/MutS-family-protein	gnl\|CDD\|380164	NF033154, endonuc_SmrA, DNA endonuclease SmrA. YdaL is a small endonuclease with homology to the C-terminal domain found in the endonuclease MutS2, but not found in the related mismatch repair protein MutS. The biological role of this endonuclease is not yet known. As one of two Small MutS2-Related proteins in E. coli, This protein was designated SmrA by Gui, et al. (PMID:21276852). The term SMR is much better known for describing a large family of Small Multidrug Resistance (SMR) efflux transporters, but in that context is used with three capital letters.	4.17736e-46
NC_016589.1\|WP_014190727.1\|741643_742948_-\|MHS-family-MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.27371e-167
NC_016589.1\|WP_085952626.1\|728182_729118_+\|agmatinase	gnl\|CDD\|212538	cd11592, Agmatinase_PAH, Agmatinase-like family includes proclavaminic acid amidinohydrolase. This agmatinase subfamily contains bacterial and fungal/metazoan enzymes, including proclavaminic acid amidinohydrolase (PAH, EC 3.5.3.22) and Pseudomonas aeruginosa guanidinobutyrase (GbuA) and guanidinopropionase (GpuA). PAH hydrolyzes amidinoproclavaminate to yield proclavaminate and urea in clavulanic acid biosynthesis. Clavulanic acid is an effective inhibitor of beta-lactamases and is used in combination with amoxicillin to prevent the beta-lactam rings of the antibiotic from hydrolysis and, thus keeping the antibiotic biologically active. GbuA hydrolyzes 4-guanidinobutyrate (4-GB) into 4-aminobutyrate and urea while GpuA hydrolyzes 3-guanidinopropionate (3-GP) into beta-alanine and urea. Mutation studies show that significant variations in two active site loops in these two enzymes may be important for substrate specificity. This subfamily belongs to the ureohydrolase superfamily, which includes arginase, agmatinase, proclavaminate amidinohydrolase, and formiminoglutamase.	3.9809e-180
NC_016589.1\|WP_014190711.1\|723335_725651_+\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
NC_016589.1\|WP_014190721.1\|736533_737058_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.17529e-12
NC_016589.1\|WP_014190716.1\|729121_730441_-\|putative-hydroxymethylpyrimidine-transporter-CytX	gnl\|CDD\|274096	TIGR02358, purine-cytosine_transport_protein, putative hydroxymethylpyrimidine transporter CytX. On the basis of a phylogenomic study of thiamine biosythetic, salvage, and transporter genes and a highly conserved RNA element THI, this protein family has been identified as a probable transporter of hydroxymethylpyrimidine (HMP), the phosphorylated (by ThiD) form of which gets joined (by ThiE) to hydroxyethylthiazole phosphate to make thiamine phosphate. [Transport and binding proteins, Nucleosides, purines and pyrimidines, Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	1.39977e-99
NC_016589.1\|WP_014190726.1\|740443_741622_+\|OpgC-domain-containing-protein	gnl\|CDD\|378405	pfam10129, OpgC_C, OpgC protein. This domain, found in various hypothetical and OpgC prokaryotic proteins. It is likely to act as an acyltransferase enzyme.	6.08124e-87
NC_016589.1\|WP_014190720.1\|735576_736359_+\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	9.20375e-153
NC_016589.1\|WP_014190710.1\|721975_722971_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	1.44704e-154
NC_016589.1\|WP_014190723.1\|738069_738885_+\|septum-site-determining-protein-MinD	gnl\|CDD\|225447	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning].	4.73691e-162
NC_016589.1\|WP_014190718.1\|732125_733424_+\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NC_016589.1\|WP_041730955.1\|725701_726382_+\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|178807	PRK00031, lolA, outer membrane lipoprotein chaperone LolA.	1.66574e-78

>NC_016589.1|WP_014190718.1|732125_733424_+|serine--tRNA-ligase
MLDIQHLRKDLDGVAKRLADRGYTLDVAAFAALEAERREIQTRTEELQARRNSLSKQIGAMKGRGEDTSAVMAEVSGIGDTMKESAAKLDDVQKRLSDLMLTVPNLPHESVPVGNDETQNVEVRRWGTPRAFDFEVRDHVDVGAPLGVDFETGAKLSGARFTLLRGQIARLHRALAQFMIDTHTEQHGYTEAYTPYIVNPEILYGTGQLPKFADDMFRVEKGGDENTVTQYLISTSEISLTNTVRDSILEADALPVKLTAHSPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQVTSPEHSYAALDEMVGQAETILQKLELPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSCSNTEAFQARRMQARFRNAQGKPEFVHTLNGSGLAVGRTLVAVLENFQNADGSVTIPAALRPYMRGAERIEVAASV
>NC_016589.1|WP_041730193.1|730667_731984_+|replication-associated-recombination-protein-A
MFEENRGTVPLAERLRPRTIDDVIGQKHLLGPSKPLRVAFESGEAHSMILWGPPGVGKTTLARLMADAFHAQFISLSAVLSGVKDIREAVETAQIHRANGHQTLVFVDEVHRFNKSQQDAFLPHVESGLFVFVGATTENPSFEVNSALLSRAAVYVLRSLDADELKELLERATKELGGLTFTDEARDALIGSADGDGRKLLNNLEIVARAAAQQKQTDVDGALLGSALAENLRRFDKGGDAFYDQISALHKSVRGSNPDAALYWFCRMLDGGADPRYMARRIVRMAWEDIGLADPRAARITLDAAETYERLGSPEGELALAQALVYLAVAPKSNAGYNAYNEARRFVSKDQSRGVPVHLRNAPTKLMKELGYGHEYRYAHDEPDAYAAGETYLPDGMRDPHWYRPTPRGLEGKIGEKLDRLAELDEAWRREHREEKKR
>NC_016589.1|WP_014190716.1|729121_730441_-|putative-hydroxymethylpyrimidine-transporter-CytX
MQQETIGQHDDSATYAPLTPVPPERRAFGTSDAFALWFSLGIGLLVAQAGALLVPGLSLPHALVAIAIGTSIGVVLLALAGVVGTDTGLAAMSSLRPTLGVRGASVPAVLNAIQLVGWGSFEIIVMRDSADALAKQSFHFSMPLVWTLIFGALATLLAVSGPLSFVRRFLRSWGIWLLLGGAGWLTWNLLAKHDISALMSRPGTGEMAFGAGIDLVVAMPLSWLPLIADYTRFGKSAGGTFRGTLLGYGIANLWFYALGAIYGLAAGGGDALLTTAFAQAGGGLALFLILIDETDNAFADIHSAAVSTGTFWARASVPMLSCAFGALCTLVALVVEMGKYQNFLLLIGSVFAPLFGVVLADHFIVRKRRIDAAVLADVHGRYGYSGGWHVSAFIAWGIGIAAYHAINQWLPNLGATLPALALGAVCYLLLVSGKRRAYA
>NC_016589.1|WP_085952626.1|728182_729118_+|agmatinase
MSGNQMPRCGGITTMMRLPHVPSAEGLDACFVGVPFDLGTSNRTGARFGPRQVRSESVLLRPYNMATRAAPFDSLRVADLGDVAINPYNLLDSIDRIERAYREILKHGCKPLTLGGDHTIALPILRAIHAKHGKVGLIHIDAHADVNDTMFGEKIAHGTPFRRAVEEGLLDCSRVVQIGLRGTGYEAGDFDWCREQGFRVVQTEECWNKSLAPLMEEVRAQMGDGPVYITFDIDGIDPAFAPGTGTPEIAGLTVPQALEIVRGARGLNIVGADLVEVAPPYDPFGTTALLGANLAFELLCVLPGVEYRTAK
>NC_016589.1|WP_014190714.1|727066_727978_-|LysR-family-transcriptional-regulator
MFTHLSDLDLRLIRVFLAIVDAGGVSSAQATLNVGQSTISTQLATLETRLGYRLCERGRGGFALTSRGEQFVDACRTLLAAVDTFDSTARNVGRKLVGTLTLGMIGNTPVSANARVSEAIARFRQRDESVRIAVLVRSPGELEEMLLSERIQMAIGYFWHRVPSLEYTEIFAEDQLAYCGREHPLFARAGRVSAAQAFEHDWAWRSYPLPEAGELVPRHIGAVADNMEAVAMLVLSGRHLGYLPEHFAAPYVKEGLLAPLNPKTMRYRVAFQMVTRATRASGVRGAKREIVEAFIEDMQAAHS
>NC_016589.1|WP_144403928.1|726419_726827_-|hypothetical-protein
MTGASTTRVPGGVITFRGALVAPPFDVSIGTTPTLGISTAEQTRSGESSGNTLYVTYGADPRNPPNADVSLSVAGPATSGGQALAASFRDGKGRKMTPGIGGEYHLGALGGTLAIRTKDDASSSATRVTIVTNYR
>NC_016589.1|WP_041730955.1|725701_726382_+|outer-membrane-lipoprotein-chaperone-LolA
MKQFTGNPFTKALGAAIFSASMLFASHAFASGTEQLKAFVSQVRAARGDFTQQEIKAPGKTNNGATSNAVPTKGATSSGTFMFARPGKFIWSYQKPYSQVLQADGDKLYVYDKDLNQVTVRTLGGALGASPAAILFGSNDLDKNFNLRDAGEKGGIDWLELTPKSKDTQFETVGIGFKDGNLQAMELHDVFGNVTLLTFSNIQKNPPIKSDTFKFTVPKGADVING
>NC_016589.1|WP_014190711.1|723335_725651_+|DNA-translocase-FtsK
MAKATYSASPQALPHRMSRLFTEIRWILQVALGLFLVMALLSYSRKDPSWTHAVSVDHIANWAGRVGAYTSDILLLVFGLSSYWLIVLLARRIVANYRKITLPPAVDEDAPKDRTWLAEAFAFVLVLLASDGIEALRMWSLKVQLPRAPGGVVGDVVARHVSHALGFTGATLFLLIALAIGLSLYFRFSWLSVCEKVGDGILNAITGAQLRREAGRDRKLGEEAASKREGKVVRSREKSEDHEPVMIVPAAPAPARSERAEKEKQVPLFKDLPGDSTLPPLALLDPPPKTQETIAADTLEYTSRLIEKKLKDFGVDVSVVAAYPGPVVTRYEIEPATGVKGSQIVGLAKDLARSLSLVSIRVVETIPGKNFMALELPNQRRQTVKLSEILGSEVYANGASPLTMGLGKDIGGNPVCADLAKMPHLLVAGTTGSGKSVGINAMILSLLYKASADQVRLILIDPKMLEMSVYEGIPHLLCPVVTDMRQAGHALNWAVAEMERRYKLMSKMGVRNLASFNTKIDEAKKRDEKIPNPFSLTPDEPEPLTRLPNIVVVIDELADLMMVVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANVPTRMAFQVSSKIDSRTILDQQGAESLLGMGDMLYLPPGSGLPVRVHGAFVSDEEVHRVVEKLREHGEPNYIEGILEGGLAGDGDEGSAGAGGTGGADGESDPLYDQAVEVVIKNKRASISLVQRHLRIGYNRAARLLEQMENSGLVSAMSSNGNREILSPARDAE
>NC_016589.1|WP_014190710.1|721975_722971_-|thioredoxin-disulfide-reductase
MSSPKHAKVLILGSGPAGYSAAVYAARANLSPLLITGLAQGGQLMTTTDVENWPGDPSGVQGPELMQRLEEHARAFNTDIVFDHIHTAKLNERPMRLIGDSGEYTCDSLIIATGASAQYLGMPSEEAFMGKGVSACATCDGFFYRNGEVAVIGGGNTAVEEAIYLAGIAKKVTVVHRRDKFRAEPILIDRLLAKEKEGVVDIKWNHVLDEVLGDDSGVTGLRIKDTQSGQTTDLALQGVFVAIGHKPNTDLFAGQLEMKGGYIITKGGTSGDATATSLAGVFAAGDVQDHVYRQAITSAGTGCMAALDAQRYLETINETPTPHSMSHEADR
>NC_016589.1|WP_041730191.1|720970_721801_-|Smr/MutS-family-protein
MPKNLPHPNEPKARQKPAPRPVEPAPSKPADVAAAVRREGLAGLSSLKRALKDNAEKREVQRVAAVRAEREAVADADEFRRAIGEVERLKTPPRTTITRVPPPPEPLQSRRDEEAVLQEALSDEYDPESLLDIDETLSYYRPGISQEVVKKLRRGAWIVQAQLDLHGMRREEAREALAEFIREAVKRGLRCLRVIHGKGLGSIGKAPVLKGKVRAWLVQKSEVIAFCQARPHDGGAGAVLVLLQPGGAPRHHNHPQDKTHAQRLGKNPHPGPDSAS
>NC_016589.1|WP_014190719.1|734989_735340_-|hypothetical-protein
MTLHRFAFFCAALSGAAALAACSSTSEPELRASKPVIHVSSARAASDISSCLQRMIPSAQARRDQGSTELMVGSNAWLVTLTPSVYGSVVKVQQSSSDDGGVPEPELRFDIARCTT
>NC_016589.1|WP_014190720.1|735576_736359_+|type-I-methionyl-aminopeptidase
MAITLKTPADIEKLRISGRMAAEVLAMIAEHVRPGVTTDELDAICNRFIVDELKAIPANVGYMGFPKTVCTSVNHVVCHGIPGPKELKDGDIINIDVAIIKDGYYGDTSRMYYAGTPSEQARRLAETTYEAMVAGIREVRPGATLGDVGAAIQSVAHREGFSVVREYCGHGIGRVYHEDPQVLHYGQRGAGLRLKPGLVFTIEPMINAGRAATQQSRDGWTVTTKDRSLSAQWEHMVAVTEEGFELLTPWPDGTGPYEAP
>NC_016589.1|WP_014190721.1|736533_737058_+|GNAT-family-N-acetyltransferase
MSPSLTVSRIAAQQGSVLRELRTASLREAPYAFGETLEDALLVDPSSFEETAALHANSPRLATFLLYTEGHPCGLVHAYIEETPGARAFVSALWVAPAVRHLRGGELLMNVATRWLAAQGAAEVHAWISEENRTAMRFYERLGFGPTGERRAMPSHEEEAESLFVRHMQAEDDL
>NC_016589.1|WP_014190722.1|737212_737980_+|septum-site-determining-protein-MinC
MSLNKTPFFELRSGSVDTLLFVVKTPDLNALRTELTRRFEATPEFFAGDVVAIDVRRLAEQERVSLVDLEALLKSVRMRPIGIVALPAQTWAIQWANEGGLPILEARDRRGAPKPSADEAKPNTEAAAVIEAAVAKEPPPASLPQPATIIDRPLRSGQQVYAKGDLIVLGLVSYGAEVIAEGNIHIYAPLRGRALAGVHGNLDARIFCTCLEPELISIAGIYRTTENPLPADVASKPVQIWLQEEKLMIEPLRLT
>NC_016589.1|WP_014190723.1|738069_738885_+|septum-site-determining-protein-MinD
MAKIIVVTSGKGGVGKTTTSASFASALALRGHKTAVIDFDVGLRNLDLIMGCERRVVYDLINVIQGEANLHQALIKDKKSENLYILPASQTRDKDALTLEGVEKVIEELIKMDFEYIVCDSPAGIESGALMAMHFADEALIVTNPEVSSVRDSDRILGILSSKTKRAIEGKEPVKEHLLITRYNPKRVSEGEMLSLSDIQEILRIDLIGVIPESEAVLHASNQGLPAVHLDGTDVAESYKDVVSRFLGEEKTLRFTDYQKPGLLQRIFGTK
>NC_016589.1|WP_006999197.1|738894_739149_+|cell-division-topological-specificity-factor-MinE
MSILSFLLGEKRKSASVAKERLQLIIAHERAGGKAAADYLPALQRELVAVISKYVKISDDDIRVSLERQDDLEVLEVKIEIPQA
>NC_016589.1|WP_014190724.1|739458_739764_+|YXWGXW-repeat-containing-protein
MKLSCRHLLARAALLAAGVVSMSGAFADVVIVAPSAPPAPRFEPVPAARAGFVWDAGHWNWEGRYVWVPGHWIAVRPGARWAPGVWAPFRGRYRYIPGHWI
>NC_016589.1|WP_014190725.1|740014_740194_-|hypothetical-protein
MNIHLQSAHLVAIVTIALVTALLLAVKFRPATWRGVVLEAVVANVGAILAVLAFEVLTA
>NC_016589.1|WP_014190726.1|740443_741622_+|OpgC-domain-containing-protein
MTSPTRSLEVDFFRGIVLLIIAVDHITGSVLSRFTLHQYAFCDSAEVFVFLGGYASAAAYTALATRRSDSAARRRFFKRSWEIYRAYLFTAFLMLIGGGLLMALKIDTPMVQYTEWPAFLARPAGLLVDIALLRQQPYLSAVLPMYSVFALAVPVIVPLAQKRPVVAVFGSLLVWLAAMPLLRFLPGTYGEAWSFNPFAWQLMFMTGVLARIQPVSGTFHAGKIARWLTAGAIALALTFAFFKLFLETQALPGYMKQNLATLRIVSFAAIAWIVARAVYAGWVARLARRLPGIVTIGQQGLVCFIAGACVSLVLDSALRAMGVLGLGRYPSHWILGLIADGIAIASLLWLARFWADRKAAKAARAKVAERQASRIPVMKGPLPAHISNRRDR
>NC_016589.1|WP_014190727.1|741643_742948_-|MHS-family-MFS-transporter
MAAPSLSAAQPGDGSQSASRVIFASFIGTAIEFYDFYVYATAAALVIGPVFFPHDSPAAQALSAFVTFGIAFFARPIGSFLFGHFGDRIGRKSTLVASLLVMGVSTTLIGFVPGYDSIGSAAPVLLCILRFGQGIGLGGEWGGAALLATEYAPQGKRGLFGMFPQLGPSIGFLASNGLFFGLALSLSDEQFRSWGWRVPFIVSAVLVALGLYVRLKIAETPAFRAAVERRERVKVPVATLLSSHLAPTLLGAFAMVVCYTLFYISTVFSLSFGVAKLHFARETFLGLLCFAVLFMAIATPISAIASDRFGRKPVLVVGCVAAILSGFAMAPLLGSGDTIQVALFLTIELFLMGVTFAPMGALLPELFPTNVRYTGAGVAYNLGGILGASVAPYIAQLLANRGGLSWVGGYVSAAAAVSLIAVLCMRETRHIKLN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_016589_2	2.18\|734806\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734806-734838	33	NC_016589.1	1186196-1186228	0	1.0
NC_016589_2	2.19\|734867\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734867-734899	33	NC_016589.1	2300898-2300930	0	1.0

1. spacer 2.18|734806|33|NC_016589|CRISPRCasFinder,PILER-CR matches to position: 1186196-1186228, mismatch: 0, identity: 1.0

cgcgaagatcgcggtccaggcgggcgtcagata	CRISPR spacer
cgcgaagatcgcggtccaggcgggcgtcagata	Protospacer
*********************************

2. spacer 2.19|734867|33|NC_016589|CRISPRCasFinder,PILER-CR matches to position: 2300898-2300930, mismatch: 0, identity: 1.0

gcttccttgccgacgtgtcccgtgagcaccgcg	CRISPR spacer
gcttccttgccgacgtgtcccgtgagcaccgcg	Protospacer
*********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_016589_1	1.24\|533378\|33\|NC_016589\|CRISPRCasFinder,CRT	533378-533410	33	NZ_CP013855	Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence	314793-314825	7	0.788
NC_016589_1	1.24\|533378\|33\|NC_016589\|CRISPRCasFinder,CRT	533378-533410	33	NZ_CP011869	Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence	181334-181366	7	0.788
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_CP024308	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3a, complete sequence	332767-332799	7	0.788
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	1176286-1176318	7	0.788
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	2001932-2001964	7	0.788
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	182625-182657	7	0.788
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	2236261-2236293	7	0.788
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_CP020399	Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence	334016-334048	7	0.788
NC_016589_1	1.17\|532951\|33\|NC_016589\|CRISPRCasFinder,CRT	532951-532983	33	NZ_CP046321	Gordonia bronchialis strain FDAARGOS_676 plasmid unnamed1, complete sequence	51879-51911	8	0.758
NC_016589_1	1.17\|532951\|33\|NC_016589\|CRISPRCasFinder,CRT	532951-532983	33	NC_013442	Gordonia bronchialis DSM 43247 plasmid pGBRO01, complete sequence	47632-47664	8	0.758
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_CP016463	Bosea sp. RAC05 plasmid pBSY19_1, complete sequence	161565-161597	8	0.758
NC_016589_2	2.19\|734867\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734867-734899	33	NC_012521	Rhodococcus opacus B4 plasmid pROB02, complete sequence	126189-126221	8	0.758
NC_016589_2	2.27\|734194\|35\|NC_016589\|CRT	734194-734228	35	NZ_CP020399	Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence	334016-334050	8	0.771
NC_016589_2	2.27\|734194\|35\|NC_016589\|CRT	734194-734228	35	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	326884-326918	8	0.771
NC_016589_1	1.13\|533497\|36\|NC_016589\|PILER-CR	533497-533532	36	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	534610-534645	9	0.75
NC_016589_1	1.17\|532951\|33\|NC_016589\|CRISPRCasFinder,CRT	532951-532983	33	KF017927	Mycobacterium phage Odin, complete genome	43967-43999	9	0.727
NC_016589_2	2.3\|733892\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	733892-733924	33	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	924531-924563	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000032	Agrobacterium fabrum strain CFBP2788 plasmid pTi_CFBP2788, complete sequence	51083-51115	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	KY000034	Agrobacterium sp. strain C58PMP90 plasmid pTi_C58PMP90, complete sequence	4103-4135	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	KY000036	Agrobacterium sp. strain GV3101 plasmid pTi_GV3101, complete sequence	5369-5401	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_CP032929	Agrobacterium tumefaciens strain 1D1460 plasmid pTi1D1460, complete sequence	198610-198642	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NC_002147	Agrobacterium tumefaciens MAFF301001 plasmid pTi-SAKURA, complete sequence	2709-2741	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NC_011990	Agrobacterium radiobacter K84 plasmid pAtK84b, complete sequence	114730-114762	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_CP030831	Neorhizobium sp. NCHU2750 plasmid pTiNCHU2750, complete sequence	40632-40664	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NC_003065	Agrobacterium fabrum str. C58 plasmid Ti, complete sequence	36969-37001	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_MK439382	Agrobacterium tumefaciens strain CFBP2178 plasmid pTiCFBP2178, complete sequence	36581-36613	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_MK439383	Agrobacterium tumefaciens strain CFBP1935 plasmid pTiCFBP1935, complete sequence	36581-36613	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_MK439386	Agrobacterium tumefaciens strain T37 plasmid pTiT37, complete sequence	35554-35586	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_MK318986	Agrobacterium rhizogenes strain C6.5 plasmid pTiC6.5, complete sequence	203291-203323	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_MK439385	Agrobacterium tumefaciens strain Kerr27 plasmid pTiKerr27, complete sequence	36970-37002	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_MK439384	Agrobacterium tumefaciens strain Kerr108 plasmid pTiKerr108, complete sequence	36581-36613	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_MK439381	Agrobacterium tumefaciens strain Sule1 plasmid pTiSule1, complete sequence	36581-36613	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_MF511177	Agrobacterium rhizogenes strain C5.7 plasmid pTiC5.7, complete sequence	203291-203323	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000041	Agrobacterium tumefaciens strain CFBP296 plasmid pTi_CFBP296, complete sequence	57339-57371	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000044	Agrobacterium fabrum strain CFBP1933 plasmid pTi_CFBP1933, complete sequence	195304-195336	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000073	Agrobacterium tumefaciens strain Tun188 plasmid pTi_Tun188, complete sequence	185868-185900	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000057	Agrobacterium fabrum strain CFBP5505 plasmid pTi_CFBP5505, complete sequence	35279-35311	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000071	Agrobacterium tumefaciens strain Tun183 plasmid pTi_Tun183, complete sequence	206502-206534	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000047	Agrobacterium genomosp. 1 strain CFBP2516 plasmid pTi_CFBP2516, complete sequence	123698-123730	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000046	Agrobacterium genomosp. 1 strain CFBP2177 plasmid pTi_CFBP2177, complete sequence	46418-46450	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000051	Agrobacterium genomosp. 1 strain CFBP5503 plasmid pTi_CFBP5503, complete sequence	55333-55365	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000056	Agrobacterium vitis strain Tun201 plasmid pTi_Tun201, complete sequence	51436-51468	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_CP021816	Sinorhizobium meliloti strain M270 plasmid accessoryB, complete sequence	94553-94585	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000052	Agrobacterium tumefaciens strain CFBP7000 plasmid pTi_CFBP7000, complete sequence	159933-159965	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000049	Agrobacterium rhizogenes strain CFBP4423 plasmid pTi_CFBP4423, complete sequence	107919-107951	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000055	Agrobacterium rubi strain Tun159 plasmid pTi_Tun159, complete sequence	188626-188658	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000043	Agrobacterium rhizogenes strain CFBP1905 plasmid pTi_CFBP1905, complete sequence	115898-115930	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000048	Agrobacterium rhizogenes strain CFBP2746 plasmid pTi_CFBP2746, complete sequence	27435-27467	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000053	Agrobacterium genomosp. 1 strain DC12-001 plasmid pTi_DC12-001, complete sequence	107783-107815	9	0.727
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_KY000054	Agrobacterium tumefaciens strain Tun154 plasmid pTi_Tun154, complete sequence	124684-124716	9	0.727
NC_016589_2	2.27\|734194\|35\|NC_016589\|CRT	734194-734228	35	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	182625-182659	9	0.743
NC_016589_2	2.27\|734194\|35\|NC_016589\|CRT	734194-734228	35	NZ_CP024308	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3a, complete sequence	332765-332799	9	0.743
NC_016589_2	2.27\|734194\|35\|NC_016589\|CRT	734194-734228	35	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	1176284-1176318	9	0.743
NC_016589_2	2.27\|734194\|35\|NC_016589\|CRT	734194-734228	35	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	2001930-2001964	9	0.743
NC_016589_2	2.27\|734194\|35\|NC_016589\|CRT	734194-734228	35	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	2236261-2236295	9	0.743
NC_016589_1	1.20\|533134\|33\|NC_016589\|CRISPRCasFinder,CRT	533134-533166	33	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	431325-431357	10	0.697
NC_016589_1	1.20\|533134\|33\|NC_016589\|CRISPRCasFinder,CRT	533134-533166	33	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	616082-616114	10	0.697
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	473071-473103	10	0.697
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_CP035000	Rhizobium acidisoli strain FH23 plasmid pRapFH23b, complete sequence	68005-68037	10	0.697
NC_016589_2	2.8\|734196\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734196-734228	33	NZ_HG938356	Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence	1182316-1182348	10	0.697
NC_016589_2	2.14\|734562\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	734562-734594	33	MK967384	Gordonia phage Sidious, complete genome	9690-9722	10	0.697
NC_016589_2	2.3\|733892\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	733892-733924	33	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	1069851-1069883	11	0.667
NC_016589_2	2.3\|733892\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	733892-733924	33	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	1055940-1055972	11	0.667
NC_016589_2	2.3\|733892\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	733892-733924	33	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	1057050-1057082	11	0.667
NC_016589_2	2.3\|733892\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	733892-733924	33	NZ_CP013531	Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence	944883-944915	11	0.667
NC_016589_2	2.3\|733892\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	733892-733924	33	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	950320-950352	11	0.667
NC_016589_2	2.3\|733892\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	733892-733924	33	NZ_CP013584	Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence	944882-944914	11	0.667
NC_016589_2	2.3\|733892\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	733892-733924	33	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	1055940-1055972	11	0.667
NC_016589_2	2.3\|733892\|33\|NC_016589\|CRISPRCasFinder,PILER-CR	733892-733924	33	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	1057050-1057082	11	0.667

1. spacer 1.24|533378|33|NC_016589|CRISPRCasFinder,CRT matches to NZ_CP013855 (Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence) position: , mismatch: 7, identity: 0.788

gtcctcgacgcgggtaccccgaccgacttcttc	CRISPR spacer
ttcctcgacgccggtacccagaccgtcggcgtc	Protospacer
 ********** ******* ***** *  * **

2. spacer 1.24|533378|33|NC_016589|CRISPRCasFinder,CRT matches to NZ_CP011869 (Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence) position: , mismatch: 7, identity: 0.788

gtcctcgacgcgggtaccccgaccgacttcttc	CRISPR spacer
ttcctcgacgccggtacccagaccgtcggcgtc	Protospacer
 ********** ******* ***** *  * **

3. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP024308 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3a, complete sequence) position: , mismatch: 7, identity: 0.788

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaagacctcgaag	Protospacer
  ************* *********** . **

4. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 7, identity: 0.788

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaagacctcgaag	Protospacer
  ************* *********** . **

5. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 7, identity: 0.788

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaagacctcaaag	Protospacer
  ************* *********** . **

6. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 7, identity: 0.788

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaagacctcaaag	Protospacer
  ************* *********** . **

7. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 7, identity: 0.788

gcgatcgcaccggcgtcgatgaagaccgtcaac-	CRISPR spacer
tagatggcaccggcgacgatgaagacc-tcgatg	Protospacer
  *** ********* *********** **.*.

8. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP020399 (Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
gcgatcgcgccggcgtcgatgcagccggccgat	Protospacer
********.************ ** * *.*.*.

9. spacer 1.17|532951|33|NC_016589|CRISPRCasFinder,CRT matches to NZ_CP046321 (Gordonia bronchialis strain FDAARGOS_676 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ctatccaagcgatgaactgctcgacgtggccga	CRISPR spacer
atgcctgaccgaagaactgctcgacgtcgccga	Protospacer
 *..*..* *** ************** *****

10. spacer 1.17|532951|33|NC_016589|CRISPRCasFinder,CRT matches to NC_013442 (Gordonia bronchialis DSM 43247 plasmid pGBRO01, complete sequence) position: , mismatch: 8, identity: 0.758

ctatccaagcgatgaactgctcgacgtggccga	CRISPR spacer
atgcctgaccgaagaactgctcgacgtcgccga	Protospacer
 *..*..* *** ************** *****

11. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP016463 (Bosea sp. RAC05 plasmid pBSY19_1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
ggaaccgcaccgtcgtcgatgcagaccgttgag	Protospacer
* .*.******* ******** *******..*

12. spacer 2.19|734867|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NC_012521 (Rhodococcus opacus B4 plasmid pROB02, complete sequence) position: , mismatch: 8, identity: 0.758

gcttccttgccgacgtgtcccgtgagcaccgcg	CRISPR spacer
accgacttgccgacgcgttccgtgagcacggtg	Protospacer
.*.  **********.**.********** *.*

13. spacer 2.27|734194|35|NC_016589|CRT matches to NZ_CP020399 (Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.771

tcgcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
gcgcgatcgcgccggcgtcgatgcagccggccgat	Protospacer
 *********.************ ** * *.*.*.

14. spacer 2.27|734194|35|NC_016589|CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 8, identity: 0.771

tcgcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tcgcgatcggcccggcgtcgatgaaatccaccccc	Protospacer
*********  **************. **..*  *

15. spacer 1.13|533497|36|NC_016589|PILER-CR matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 9, identity: 0.75

gccccagtagactcggcgcgcgccaccgaagaaacc	CRISPR spacer
gccgcagtcgactcggcgcgcgccacctacatcgac	Protospacer
*** **** ****************** * .  . *

16. spacer 1.17|532951|33|NC_016589|CRISPRCasFinder,CRT matches to KF017927 (Mycobacterium phage Odin, complete genome) position: , mismatch: 9, identity: 0.727

ctatccaagcgatgaactgctcgacgtggccga	CRISPR spacer
gccgccaagcgatgaacttctcgacctgctcca	Protospacer
 .  ************** ****** ** .* *

17. spacer 2.3|733892|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 9, identity: 0.727

ttcacgaatctgccggcatcccgcgacgatggg	CRISPR spacer
tgctgaaatctgccggcatcacgggacgatcaa	Protospacer
* *  .************** ** ****** ..

18. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000032 (Agrobacterium fabrum strain CFBP2788 plasmid pTi_CFBP2788, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

19. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to KY000034 (Agrobacterium sp. strain C58PMP90 plasmid pTi_C58PMP90, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

20. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to KY000036 (Agrobacterium sp. strain GV3101 plasmid pTi_GV3101, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

21. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP032929 (Agrobacterium tumefaciens strain 1D1460 plasmid pTi1D1460, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

22. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NC_002147 (Agrobacterium tumefaciens MAFF301001 plasmid pTi-SAKURA, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

23. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NC_011990 (Agrobacterium radiobacter K84 plasmid pAtK84b, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

24. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP030831 (Neorhizobium sp. NCHU2750 plasmid pTiNCHU2750, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

25. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NC_003065 (Agrobacterium fabrum str. C58 plasmid Ti, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

26. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_MK439382 (Agrobacterium tumefaciens strain CFBP2178 plasmid pTiCFBP2178, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

27. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_MK439383 (Agrobacterium tumefaciens strain CFBP1935 plasmid pTiCFBP1935, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

28. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_MK439386 (Agrobacterium tumefaciens strain T37 plasmid pTiT37, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

29. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_MK318986 (Agrobacterium rhizogenes strain C6.5 plasmid pTiC6.5, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

30. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_MK439385 (Agrobacterium tumefaciens strain Kerr27 plasmid pTiKerr27, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

31. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_MK439384 (Agrobacterium tumefaciens strain Kerr108 plasmid pTiKerr108, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

32. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_MK439381 (Agrobacterium tumefaciens strain Sule1 plasmid pTiSule1, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

33. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_MF511177 (Agrobacterium rhizogenes strain C5.7 plasmid pTiC5.7, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

34. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000041 (Agrobacterium tumefaciens strain CFBP296 plasmid pTi_CFBP296, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

35. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000044 (Agrobacterium fabrum strain CFBP1933 plasmid pTi_CFBP1933, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

36. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000073 (Agrobacterium tumefaciens strain Tun188 plasmid pTi_Tun188, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

37. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000057 (Agrobacterium fabrum strain CFBP5505 plasmid pTi_CFBP5505, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

38. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000071 (Agrobacterium tumefaciens strain Tun183 plasmid pTi_Tun183, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

39. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000047 (Agrobacterium genomosp. 1 strain CFBP2516 plasmid pTi_CFBP2516, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

40. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000046 (Agrobacterium genomosp. 1 strain CFBP2177 plasmid pTi_CFBP2177, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

41. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000051 (Agrobacterium genomosp. 1 strain CFBP5503 plasmid pTi_CFBP5503, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

42. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000056 (Agrobacterium vitis strain Tun201 plasmid pTi_Tun201, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

43. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP021816 (Sinorhizobium meliloti strain M270 plasmid accessoryB, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaatacttcgacc	Protospacer
  ************* ******* **. . * *

44. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000052 (Agrobacterium tumefaciens strain CFBP7000 plasmid pTi_CFBP7000, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

45. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000049 (Agrobacterium rhizogenes strain CFBP4423 plasmid pTi_CFBP4423, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

46. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000055 (Agrobacterium rubi strain Tun159 plasmid pTi_Tun159, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

47. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000043 (Agrobacterium rhizogenes strain CFBP1905 plasmid pTi_CFBP1905, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

48. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000048 (Agrobacterium rhizogenes strain CFBP2746 plasmid pTi_CFBP2746, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

49. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000053 (Agrobacterium genomosp. 1 strain DC12-001 plasmid pTi_DC12-001, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

50. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_KY000054 (Agrobacterium tumefaciens strain Tun154 plasmid pTi_Tun154, complete sequence) position: , mismatch: 9, identity: 0.727

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
tagatcgcaccggcgacgatgaacacttcgacc	Protospacer
  ************* ******* **. . * *

51. spacer 2.27|734194|35|NC_016589|CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.743

tcgcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
gatagatcgcaccggcgacgatgaagacctcaaag	Protospacer
    ************* *********** . **

52. spacer 2.27|734194|35|NC_016589|CRT matches to NZ_CP024308 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3a, complete sequence) position: , mismatch: 9, identity: 0.743

tcgcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
gatagatcgcaccggcgacgatgaagacctcgaag	Protospacer
    ************* *********** . **

53. spacer 2.27|734194|35|NC_016589|CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 9, identity: 0.743

tcgcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
gatagatcgcaccggcgacgatgaagacctcgaag	Protospacer
    ************* *********** . **

54. spacer 2.27|734194|35|NC_016589|CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 9, identity: 0.743

tcgcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
gatagatcgcaccggcgacgatgaagacctcaaag	Protospacer
    ************* *********** . **

55. spacer 2.27|734194|35|NC_016589|CRT matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 9, identity: 0.743

tcgcgatcgcaccggcgtcgatgaagaccgtcaac-	CRISPR spacer
gatagatggcaccggcgacgatgaagacc-tcgatg	Protospacer
    *** ********* *********** **.*.

56. spacer 1.20|533134|33|NC_016589|CRISPRCasFinder,CRT matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 10, identity: 0.697

ccgtcattcgcgcgatacatcgcgagcatgagc	CRISPR spacer
gagcgcccggcgcggtacagcgcgagcatgagc	Protospacer
  *.  .. *****.**** *************

57. spacer 1.20|533134|33|NC_016589|CRISPRCasFinder,CRT matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 10, identity: 0.697

ccgtcattcgcgcgatacatcgcgagcatgagc	CRISPR spacer
gagcgcccggcgcggtacagcgcgagcatgagc	Protospacer
  *.  .. *****.**** *************

58. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 10, identity: 0.697

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
ggcgcggcaccggcgtcgatgaagccggtctgg	Protospacer
*  .. ****************** * *** .

59. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP035000 (Rhizobium acidisoli strain FH23 plasmid pRapFH23b, complete sequence) position: , mismatch: 10, identity: 0.697

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
atcatcggaccggcgtcgatgatgacctcgctc	Protospacer
.. **** ************** **** .   *

60. spacer 2.8|734196|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_HG938356 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence) position: , mismatch: 10, identity: 0.697

gcgatcgcaccggcgtcgatgaagaccgtcaac	CRISPR spacer
acgatcgcaccggcatccatgaagatgatgcga	Protospacer
.*************.** *******. .*  .

61. spacer 2.14|734562|33|NC_016589|CRISPRCasFinder,PILER-CR matches to MK967384 (Gordonia phage Sidious, complete genome) position: , mismatch: 10, identity: 0.697

ggtctggtccgcctgaatgtccctcactctgcc	CRISPR spacer
gtaaccaatcgcctgaatgaccctgactctgcc	Protospacer
*   . . .********** **** ********

62. spacer 2.3|733892|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 11, identity: 0.667

ttcacgaatctgccggcatcccgcgacgatggg	CRISPR spacer
gcttaaaatctgccggcatcacgggacgatcaa	Protospacer
 ..  .************** ** ****** ..

63. spacer 2.3|733892|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 11, identity: 0.667

ttcacgaatctgccggcatcccgcgacgatggg	CRISPR spacer
gcttaaaatctgccggcatcacgggacgatcaa	Protospacer
 ..  .************** ** ****** ..

64. spacer 2.3|733892|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 11, identity: 0.667

ttcacgaatctgccggcatcccgcgacgatggg	CRISPR spacer
gcttaaaatctgccggcatcacgggacgatcaa	Protospacer
 ..  .************** ** ****** ..

65. spacer 2.3|733892|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP013531 (Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence) position: , mismatch: 11, identity: 0.667

ttcacgaatctgccggcatcccgcgacgatggg	CRISPR spacer
gcttaaaatctgccggcatcacgggacgatcaa	Protospacer
 ..  .************** ** ****** ..

66. spacer 2.3|733892|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 11, identity: 0.667

ttcacgaatctgccggcatcccgcgacgatggg	CRISPR spacer
gcttaaaatctgccggcatcacgggacgatcaa	Protospacer
 ..  .************** ** ****** ..

67. spacer 2.3|733892|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP013584 (Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence) position: , mismatch: 11, identity: 0.667

ttcacgaatctgccggcatcccgcgacgatggg	CRISPR spacer
gcttaaaatctgccggcatcacgggacgatcaa	Protospacer
 ..  .************** ** ****** ..

68. spacer 2.3|733892|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 11, identity: 0.667

ttcacgaatctgccggcatcccgcgacgatggg	CRISPR spacer
gcttaaaatctgccggcatcacgggacgatcaa	Protospacer
 ..  .************** ** ****** ..

69. spacer 2.3|733892|33|NC_016589|CRISPRCasFinder,PILER-CR matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 11, identity: 0.667

ttcacgaatctgccggcatcccgcgacgatggg	CRISPR spacer
gcttaaaatctgccggcatcacgggacgatcaa	Protospacer
 ..  .************** ** ****** ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

189299 : 218024

Acidithiobacillus_phage(20.0%)

integrase,transposase

attL 196560:196585|attR 200003:200028

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_175582444.1\|189299_190340_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_014190252.1\|190336_192037_+	hypothetical protein	NA	NA	NA	NA
WP_148276033.1\|192090_193896_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_041730081.1\|194402_194729_-	N-6 DNA methylase	NA	NA	NA	NA
WP_014190255.1\|194872_195640_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.6e-72	55.0
196560:196585	attL	NA	NA	NA	NA
WP_014253235.1\|196645_197650_-\|integrase	site-specific integrase	A0A0K2CP59	Brevibacillus_phage	1.1e-23	28.5
WP_014190257.1\|197646_198639_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	2.8e-05	43.8
WP_014190258.1\|198635_199898_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_014190260.1\|201301_202915_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	2.7e-106	43.5
200003:200028	attR	NA	NA	NA	NA
WP_014190261.1\|202965_204096_-	AAA family ATPase	NA	NA	NA	NA
WP_014190262.1\|204092_205406_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_014190263.1\|205395_208473_-	type I restriction endonuclease subunit R	NA	NA	NA	NA
WP_014190264.1\|209187_209676_+	hypothetical protein	NA	NA	NA	NA
WP_014190265.1\|209692_210268_+	hypothetical protein	NA	NA	NA	NA
WP_014190266.1\|210658_212221_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_148276034.1\|212712_214431_-	hypothetical protein	NA	NA	NA	NA
WP_050878255.1\|215087_216119_+	restriction endonuclease	NA	NA	NA	NA
WP_041730090.1\|216449_218024_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	1.4e-123	45.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NC_016625

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_016625_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_016625_1

1473010-1473342

TypeI-E

Consensus_repeat	Method
GTCTATCTCCGCACACGCGGAGGAACC	CRISPRCasFinder

5 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NC_016625_1

>merge|NC_016625|1|1473010-1473342|CRISPRCasFinder
AGCTATCTCCGTGCAAGCGGAGGAACCGGGCAGTCTCAGTCGCCCATTCTGAACGGCAAAGGTCTATCTCCGCGCAGGCGGAGGAACCTTGCAGCGCGTGAGCCGTTCGTCGATCTCGGTGGGTCTATCTCCGCGCGCGCGGAGGAACCCTGGAGGTGATGACGATGGAAGAGCTACACAAGGGTCTATCTCCGCACACACGGAGGAACCGGCACAAAAGTCGCCGCGCCGGCCATCATCGGAGGCCTAACTCCGCCCACGCGGAGGAACCCGCCGCTGCCGCCGCTTTTGTCGAGGCCCTGCGGGCCTATCTCCGCACACACGGAGGAACCC

>NC_016625|1|1|1473010-1473342|CRISPRCasFinder
AGCTATCTCCGTGCAAGCGGAGGAACC	GGGCAGTCTCAGTCGCCCATTCTGAACGGCAAAG
GTCTATCTCCGCGCAGGCGGAGGAACC	TTGCAGCGCGTGAGCCGTTCGTCGATCTCGGTGG
GTCTATCTCCGCGCGCGCGGAGGAACC	CTGGAGGTGATGACGATGGAAGAGCTACACAAGG
GTCTATCTCCGCACACACGGAGGAACC	GGCACAAAAGTCGCCGCGCCGGCCATCATCGGAG
GCCTAACTCCGCCCACGCGGAGGAACC	CGCCGCTGCCGCCGCTTTTGTCGAGGCCCTGCGG
GCCTATCTCCGCACACACGGAGGAACCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_016625.1\|WP_014251510.1\|1475997_1476738_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
NC_016625.1\|WP_014251513.1\|1478536_1480153_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cls000028_cas8e_CAS-I-E	gnl\|CDD\|274192
NC_016625.1\|WP_014251515.1\|1482943_1484362_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|273327
NC_016625.1\|WP_014251502.1\|1467210_1467741_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_016625.1\|WP_014251514.1\|1480149_1482759_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NC_016625.1\|WP_014251501.1\|1465593_1466592_+\|GlxA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227311
NC_016625.1\|WP_014251512.1\|1477971_1478550_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	mkCas0196_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NC_016625.1\|WP_014251503.1\|1467779_1468976_-\|formaldehyde-dehydrogenase,-glutathione-independent	unknown	unknown	gnl\|CDD\|274314
NC_016625.1\|WP_014251497.1\|1459592_1461509_-\|(Fe-S)-binding-protein	unknown	unknown	gnl\|CDD\|371832
NC_016625.1\|WP_014251499.1\|1463616_1464147_-\|4-vinyl-reductase	unknown	unknown	gnl\|CDD\|198057
NC_016625.1\|WP_014251509.1\|1475257_1476001_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|215025
NC_016625.1\|WP_014251506.1\|1471288_1472992_+\|choline-dehydrogenase	unknown	unknown	gnl\|CDD\|235000
NC_016625.1\|WP_014251505.1\|1469807_1471277_+\|betaine-aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|183918
NC_016625.1\|WP_014251504.1\|1469191_1469779_+\|transcriptional-regulator-BetI	unknown	unknown	gnl\|CDD\|179115
NC_016625.1\|WP_014251516.1\|1484470_1484734_-\|hypothetical-protein	unknown	unknown	unknown
NC_016625.1\|WP_014251500.1\|1464183_1465155_-\|dipeptidase	unknown	unknown	gnl\|CDD\|366534
NC_016625.1\|WP_014251498.1\|1461523_1463587_-\|NADH:flavin-oxidoreductase	unknown	unknown	gnl\|CDD\|240085
NC_016625.1\|WP_014251508.1\|1474353_1475241_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NC_016625.1\|WP_014251511.1\|1476739_1477921_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NC_016625.1\|WP_014251507.1\|1474079_1474382_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244

Protein	Function_ID	Function_description	E-value
NC_016625.1\|WP_014251510.1\|1475997_1476738_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	3.09897e-44
NC_016625.1\|WP_014251513.1\|1478536_1480153_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	7.13513e-21
NC_016625.1\|WP_014251515.1\|1482943_1484362_-\|MFS-transporter	gnl\|CDD\|273327	TIGR00895, transport_protein, benzoate transport. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.58621e-74
NC_016625.1\|WP_014251502.1\|1467210_1467741_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.3322e-13
NC_016625.1\|WP_014251514.1\|1480149_1482759_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	2.5267e-85
NC_016625.1\|WP_014251501.1\|1465593_1466592_+\|GlxA-family-transcriptional-regulator	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	1.0174e-138
NC_016625.1\|WP_014251512.1\|1477971_1478550_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	4.56486e-06
NC_016625.1\|WP_014251503.1\|1467779_1468976_-\|formaldehyde-dehydrogenase,-glutathione-independent	gnl\|CDD\|274314	TIGR02819, formaldehyde_dehydrogenase_glutathione-independent, formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. [Central intermediary metabolism, One-carbon metabolism].	0
NC_016625.1\|WP_014251497.1\|1459592_1461509_-\|(Fe-S)-binding-protein	gnl\|CDD\|371832	pfam11982, DUF3483, Domain of unknown function (DUF3483). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 230 amino acids in length. This domain is found associated with pfam02754.	3.17432e-100
NC_016625.1\|WP_014251499.1\|1463616_1464147_-\|4-vinyl-reductase	gnl\|CDD\|198057	smart00989, V4R, The V4R (vinyl 4 reductase) domain is a predicted small molecular binding domain, that may bind to hydrocarbons.	1.09676e-11
NC_016625.1\|WP_014251509.1\|1475257_1476001_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	4.90115e-28
NC_016625.1\|WP_014251506.1\|1471288_1472992_+\|choline-dehydrogenase	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	0
NC_016625.1\|WP_014251505.1\|1469807_1471277_+\|betaine-aldehyde-dehydrogenase	gnl\|CDD\|183918	PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional.	0
NC_016625.1\|WP_014251504.1\|1469191_1469779_+\|transcriptional-regulator-BetI	gnl\|CDD\|179115	PRK00767, PRK00767, transcriptional regulator BetI; Validated.	8.58931e-110
NC_016625.1\|WP_014251500.1\|1464183_1465155_-\|dipeptidase	gnl\|CDD\|366534	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19).	8.2986e-122
NC_016625.1\|WP_014251498.1\|1461523_1463587_-\|NADH:flavin-oxidoreductase	gnl\|CDD\|240085	cd04734, OYE_like_3_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 3. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase. One member of this subgroup, the Sinorhizobium meliloti stachydrine utilization protein stcD, has been idenified as a putative N-methylproline demethylase.	0
NC_016625.1\|WP_014251508.1\|1474353_1475241_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.05186e-103
NC_016625.1\|WP_014251511.1\|1476739_1477921_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.5394e-120
NC_016625.1\|WP_014251507.1\|1474079_1474382_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	3.39102e-25

>NC_016625.1|WP_014251506.1|1471288_1472992_+|choline-dehydrogenase
MSVNEYDYIIVGAGSAGNVLASRLTEDADVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNWAYETEPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWASMSGLENWSYLDCLPYFRKAETRDIGPNAYHGGDGPVHVTTSKPGNNPLFAAMVEAGVQAGYPRTEDLNGYQQEGFGPMDRTVTANGRRASTARGYLDRAKHRAGLTIVTHAVTDRVLFSGKRAIGVAYVHGGQRVTAHVRREVLVCSGAIASPQLLQRSGVGRSAWLKELEIPVVHDLPGVGENLQDHLEMYMQYECKEPVSLYPALQWWNQPAIGLEWMLNGTGVGASNQFEAGGFIRTRDDDLWPNIQYHFLPVAINYNGSNPIRMHGFQAHVGSMRSPSRGRVKLKSRDPHAHPSILFNYMADTLDWREFRDAIRITRDIMRQPALARYRGRELHPSDDLKSDAELDAFVRAKAETAFHPSCSCKMGYDDMAVVDGEGRVHGMEGLRVVDASIMPQITTGNLNAPTIMLAEKIADRIRGVAALERVSTDYFVAGGRRARAVGGGVERVGVGG
>NC_016625.1|WP_014251505.1|1469807_1471277_+|betaine-aldehyde-dehydrogenase
MSAFGEQRLYIGGEYVDATSGETFDTLDPATGETLARVQQASQADIDRAVRSAREGQREWAAMTAMQRSRILRRAVELLRARNDELAAIETRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGAQIPLRESSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGVPAGVFNVVQGDGRVGAMLAEHGGIEKISFTGGVETGKKVMARAGGSTLKEVTMELGGKSPLIVFDDANLERAADIAMTANFFSAGQVCTNGTRVFVERGVIDQFEALIAQRVKRIRIGAPDDPDTNFGPLVSAAQLQKVLGFIESGKREGARLVAGGARLADGVFARGQYVEPTVFADCRDDMRIVREEIFGPVMSILAFDDEDEVIARANDTEYGLAAGVVTENLSRAHRVIHRLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLNAYTRTKSVQVELGPYQPVF
>NC_016625.1|WP_014251504.1|1469191_1469779_+|transcriptional-regulator-BetI
MPKLGMREIRRAQLIDATLHTIDQSGLAGATLASVAQRASTSTGIVSHYFGDKDGLLEATMRHVLRSLWQGTSRRRKAAKPDPRSKLRAVVAANFDVEQVNGPVMKTWLAFWSESMHKPELRRLQRVNTRRLYSNLCADFARALTKPAARRAASGLAALIDGLWLRGALAGEPFDTKGALRVAYEYIDLVLEARG
>NC_016625.1|WP_014251503.1|1467779_1468976_-|formaldehyde-dehydrogenase,-glutathione-independent
MSSNRGVVYLGQGKVEVQSIDYPKMVDPRGRDIGHGVILRVVTTNICGSDQHMVRGRTTAEVGLVLGHEITGEVIEIGRDVETLSIGDLVSVPFNVACGRCPTCKSQHTGVCLNVNPSRAGGAYGYVDMGGWIGGQAEYVMVPYADFNLLKFPDKAQAMSKIRDLTCLSDILPTGYHGAVMAGVGPGSTVYIAGAGPVGMAAAASARLLGAACTIVGDMNEERLAHARAMGFETINLSKDATLGEQIEQLLGKPEVDCAVDCVGFEAHGHGSDSGHEAPATVLNSLMEITKAAGAIGIPGLYVTDDPGAVDAAAKKGALSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILWDRLPIADIVNVSVVSLDEAPEGYRKFDGGAPRKFVIDPHGLLKAA
>NC_016625.1|WP_014251502.1|1467210_1467741_-|GNAT-family-N-acetyltransferase
MTADYLRTALTFRLAVADDAAEIARIHVEAWQAAYRSIFPSAYLDSLSIPKRQALWTQLIARGMPRVVLAQRDEVTLGWIAWGASRDHDSKTTDAEIEAIYIDPLHWRQGAGRMLMDEAINAAASEGYREMTLWALEENARGLRFYKALGFALDGVFRTERVGGCEVCETRLRVAI
>NC_016625.1|WP_014251501.1|1465593_1466592_+|GlxA-family-transcriptional-regulator
MSSDRTASLSHFAFMPLPNFTMIAFTNAIEVLRMANYLTGQPLYRWSLVSPEGGPVTASNGLSVDTGPVECVGQPDIVFVVGGIDVQRSTTPEHLSALRRFARTGSVLGSLCTGTYALARAGLLAGYACAIHWENMSALKEEFPDTRFLKELFVIDRDRVTCTGGVAPLDMMLNLIAARVGTARVTQIAEQFIVEHVRDTSAQQRMPLVARLGSANKSLFEVISLMENNIEEPLSREELARLAGMSQRQLQRLFREHLGMTPTHYYLTLRLRRARELLLQTDMSIMHITMACGFQSACHFSKSYRDAFGTAPTRERRKQVPPLASVSSVMVA
>NC_016625.1|WP_014251500.1|1464183_1465155_-|dipeptidase
MSTLHDNSIIIDGLNISKFERSVFEDMRKGNVTAVNCTVSVWEDFQKTIDNIAEMKQQIREYSEILTLVRTTDDILRAKKENKTGIIFGFQNSYAFEDNLGYIEVFKELGVNVVQLCYNTQNLVGTGCYEPDGGLSGYGKEVIHEMNRVGIVVDLSHVGAKTSSDAIACSKKPVTYSHCCPSGLKDHPRNKSDDQLREIADANGFVGVTMFSPFLKKGPDATVDDYLEAIDYVINVIGEDKVGIGTDFTQGYSTEFFDWITHDKGRYRRLTNFGKVVNPEGIRTIGEFPNLTAAMEKAGWSETRIKKVMGENWMRYFGEVWNV
>NC_016625.1|WP_014251499.1|1463616_1464147_-|4-vinyl-reductase
MQPQLPIDVDPQTGVWTTDALPMLYVPRHFFTNNHVAVEEALGLETYAEILYKAGYKSAYHWCDKEAEKHGISGMATFEHYLKRLSQRGWGLFDIVEADPETSHARIHLRNSSFVLQQPGKQGKLCYMFAGWFAGAMDWVNDTAPEGAKKGPRSKSIETQCAAEGHAHCVFEVSPL
>NC_016625.1|WP_014251498.1|1461523_1463587_-|NADH:flavin-oxidoreductase
MRYPNLFKPLQLNKLTLRNRIVSTAHAEVYAEPGGLPGDRYIRYYEEKAKGGVGLAVCGGSSPVSIDSPQGWWKSVNLSTDKVIDPLARLAEAMHRHGAFIMIQATHMGRRSAWHGEHWPHLMSPSGVREPVHRGNAKIIEVEEIKRIIEDFAAAAKRVKDAGMDGIEISAAHQHLIDQFWSPRTNFRTDEWGGSLENRLRFGTEVLKAVREAVGADFCVGLRMCGDEFHEDGLSHENLKEIAQAMSETGLIDYIGVIGSGADTHNTLANCMPPMALPPEPFVHLAAGIKTVTKLPIMHAQSIRDAGQAERLLANGMVDLVGMTRAQIADPHMVIKIRDGREDEIKQCVGANYCIDRQYNGLDVLCVQNAATSREETMPHVIEKTRGPKRKVVVVGAGPAGLEAARVARSRGHDVVLFEKNDYVGGQIMLAAKAPQREQMAGIVRWFDMETKRLGVDRRLGVAADDKMIMAEKPDIVVLATGGSSFTDQVPAWGVEQGLAVSSWDILSGKVEPGKNVLVYDGVSTHAGAGVADFIASRGNNVEIVTPDVKVADDTGGTTFPIFYRRLYAQGVIHTPNYWLDKVYEEDGKKIAVIRNEYTEEQEERAVDQVVIENGITPNDALYWKLKPESLNRGQIDMHTLFASQPQPSLSEELGNGRFLLFRVGDCISMHNIHSAIYDSLRLCKDF
>NC_016625.1|WP_014251497.1|1459592_1461509_-|(Fe-S)-binding-protein
MNPVFVITALLWLSMAGLAFALLKRAAYWREGRATTAGAYGWANLLTIPKRYFVDLHHVVARDPYIAKTHVATAGGAILAMALVFINYGLAIYSVWLDRAIFLAAIIMFVGAMFVYKRRRAKDVPARLSHGPWDSLPLLLGSFAAGLALFTLLPASWMSGSLAVIIALLIAAGAYTMTFGAAQGGPMKHAMAGLLHLAFHPRQERFHAKTQHEHEAVPPTALKKPVLDAKEYGVGKPVEFRWNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMVGGSDSQYAGSPTPGIPVGKHSGGPAKPLISQMIEADTIWSCTTCRACVQECPMLIEHVDAIVDMRRNQTLVEGDVPGKGPITLANLRETGSQSGYDIGARYDWSVDLQVQVAQPGRPVDVLLIAGEGAFDMRYQRTLRALAKVMNKAGVDYAVLGGVETDTGDTARRLGDEATFQQCASKLMNTLSQYQFRRIVTADPHVLHSLRNEYRALGGYYEVQHHTAFMAELVATGKLTPKAAAVLADKKITYHDPCYLGRYNGETEAPRKLLKTIGIKVVEMERHGMRARCCGGGGGAPLTDIPGKQRIPDIRIADAKSIGAEVVAVGCPQCTAMLEGVVGPRPEVLDVAELVAAALE
>NC_016625.1|WP_014251507.1|1474079_1474382_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MALVVVVTSDVADRFRGFLGSVMLEVSAGLYVAPRMNKGVRERTWSVLADWHGHEPRGSVVMVWRDLDAVGGIGISHLGAPPRELVEVDGMYVVRRMMVG
>NC_016625.1|WP_014251508.1|1474353_1475241_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MLKGRLGLDTSRVPHADRHGLLWLERGTLNVIDGCLSFASGQHVDQIPHQQVSMILLGPGSSVTHDALRLLARHGTLLAAVGVDGVRTYTAPPLMPDRSDVARRQAELWGNARRRLSVARHMYALRLGEVLPHRDLDTLRGIEGARVKTIYRLRAEQFGIDWEGRRYDRANPDAADLPNQAINHAATAVQAAAAIAVQALAAIPQLGFIHEDSGQAFVLDIADLFRDDVTLSIAFAAVKEAQRCEHPIDRLVRREAARVFRKKAVIPAMIDRVKQVLRVDEKREAGDGAGRRGDE
>NC_016625.1|WP_014251509.1|1475257_1476001_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MTTLNLIHCEPDLRRLVSWAARQDWIPPGGDIGYALHAALGSAFGDRAPKPFYYRDERSGLLAYSSSSADELREAASLASPDIAALLGLDAVRGGGGLSIREFPARWTKGRVLGFEVRVCPVVRDKEGHQHDAYRAALDRAEDKAEVQREPVYGEWLARQFAATNAASIIESRMMRFQLTTSVRRTKAAGSNDKRIARHVGGPDAVFRGHLRVEDPQAFTSLLVRGVGRHRAFGFGMLQLRPASIAT
>NC_016625.1|WP_014251510.1|1475997_1476738_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MRRHLLMRLRAPLVAFGGEAIDNYGVIRDFPALSMLTGLIGNALGWDRSDFALLDGLQARLVMGTRLDNGGERLADFQTAQIGANDGGWTTLGEPEKRRGGEDSYKSPHLRYRDYHARLDALVALRLEPADEEPTLEHIAHALDHPKRPLFIGRKPCLPSARLVVGMVDASDVLDALQRAPSPDEREFRFQWPRKEGSLQNARALDIRDKRRWKTGVHGGRRAVFEGTGPHIAPCASLSTLPELPA
>NC_016625.1|WP_014251511.1|1476739_1477921_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MPQARFIQIHTLQSYPAALLNRDDAGLAKRLPMGDTIRTRISSQCLKRHWRVADDHHSLASLDVPMAIRSRITLKLIRDELIRQNVPEALAQAAAEALRHEGLLDKAGKDLKGKEALETGQAVLLGKAEIDYLVARCAALSHDYKEETALKAAIKTFLKEEKSNIEALKHGSGLESALFGRMVTSDVLASRDAAVYVAHAFTVHEAQVENDYFTVVDDLLRETGERGSAGIFDTELASGLYYGYVVVDVPQLVANLEGIGVRECFDAPAERRALAGEVVHNLLHLIATVSPGAKRGSTAPFGHASLMLVETGDWQPRTLAGAFETALSMEPGTNVRKKAIDTLADELQKHDAAYGAPPARRFMSLDDANMPGAERVSLAELGKWTQARIVEGA
>NC_016625.1|WP_014251512.1|1477971_1478550_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MTSVEDTALGSRHSLYAQIGAITGFIKAGKENEGSLKADYVALARLDPNAQTLTVQQIAALTRALQRAKVECDRFSLKQWRRWGLIAHGIALSVHCTPDEAAPRLGQQLQLASVSEARVTRLLNARGEALFQNLPRVVRLMASRGVAPNWIELGTLILNEGAVDSLRKRIAERTRIAIVRDYIRARLQSERK
>NC_016625.1|WP_014251513.1|1478536_1480153_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MTLQLNLLDDRLFRYCDVDDQSHDASLPELLVALGRDTVCDFPALRSHQCHPWHAFLVCLAAIALHEAKRDELWNTPEEWRRALLALTPDHPDGAAFSLVTPDDRPAFLQAPCKSGETRTWKKRLLTPDAVDMLITSKNHDMKAARMIHADPEDWVYALVSLQTQEGFLGAGNYGISRMNGGFASRPALGVVPAGHVGKRWARDTRLLLEQHASIAKQCDLKSKGGLALVWLRPWDGTSSLSLGELDPFYIEICRRVRLTMHGTRLVALATSSKTARIAAKERNGVTGDAWTPVNIAEAKALSITARGFDYRLASTLAFPKEFERTFERTLASTLLEDDGETGLYLLAQGITRGQGKTEGYHERRIPTSPRIRDAMRMRHTDEIAKRATDRIAAIADVRRVLWIAMCNLLGNGDSSVSDDTKKKAGDFSRRFEHEEDARFFDDLIEEVESHNEKEANDKWIGELVDRAETVLERAFVAGPRSAERRYRAQGGALSCFHSFMRTEKHVAQRIVGVLKRRDEAPRDARPDSLEEVEHDVS
>NC_016625.1|WP_014251514.1|1480149_1482759_-|CRISPR-associated-helicase/endonuclease-Cas3
MQEKEGKQHVAWGKRSREGDENAPFHPLCDHMLDVAACFVALTAKGGRIREAMHATAKRVLDDRDIARLAVFVFLHDFGKANSGFQAKRWRTGAPRGWPLHAGHGVEARLALELNENLLAGLPLDEMSAWGGAAFDLLLASLGHHGRPVREPVGIDPHLWQPVFAADGREVYNPAATLRQIGDRLRRDLPRAFEPGGEWLPDLPSFVHLFAGLVQLADWLGSSKQFFPYSEPGVERTFDEALRYATEAVGRVGLDVTHLRAAMRNARITFESAFSVSSPRPMQAALGDADLGPLLILESETGSGKTEAALWRFAKLFEAGKVDSLYFALPTRVAAVQVYKRVRDFVKCLWPSDAPVVVRALPGYESADDSDKIALPHYEVQWSDNPDDIVASKRWAAESPKRFLAATIAVGTIDQALLAGLSVRHAHLRHAALSRSLLVVDEVHASDTYMSELLEHLLKAHLATGGHALLLSATLGSRQRVRFQSVTNPPCIEEACAVPYPALTDGARISKLGRSGAKKHVHWQTCRAIDDFTHVARIAVDAARQGARVLIVRNTVPSAIATQEAIESMVDDRAWLFDVNGVATLHHSRFSVQDRPRLDAEVEARIGKKRDGMKPCIVVGTQTLEQSLDLDADLLITDICPMDVLLQRIGRLHRHDRPDAERPEGFRQARVWVLIPESGSFDAYLQRPRHGLGRLRNGGGVYPDLRMIEATRRLIEARGEREIPDDNRELVERATHPDCLDAVAAEFGPAWQALSQQLDGGKSAERVVARLHALDYDASFEALAFPGNDERVATRLGAKDRLIRFDPPVRGPFGIDVREIAMRHHMLPDDLDPDAAPSDIAPCDDGFEFSLGGAHFTYDRFGVRKRRLA
>NC_016625.1|WP_014251515.1|1482943_1484362_-|MFS-transporter
MSVAREPRASAAARLERLPFSGYHRTIFIIIAIAFFFDSVDLGTMTFVLGSIKTEFGLSTATAGLVASASFFGMVLGAAVAGLLADRFGRRPVFQWSMVLWGLASYLCSTAQSVDALIFYRVLLGIGMGMEFPIAQTLLSEFVPTASRGRLIALMDGFWPLGFIASGVVSYFVLPTFGWRTEFALLAIPAVFVLIVRRVVPESPRWLEHRGRIDEADRVLADVEVRVMKAKGLSRLPALSMLAEPAAKHGSGAFREIWSAAYRRRTVMVWMLWFFALLGFYGLTSWLGALMQQAGFAVTKSVLYTVLISLGGVPGFLCAAWLVERWGRKPTCIASLVGSGVMAYVYGQTALHAETPTLLICAGLAMQFFLFAMWAVLYTYTPELYGTGARATGSGFASAIGRVGSLIGPYVVGVVLPVFGQGGVFSLGAACFVVAASAVWVLGIETKGLTLETLVSEAEEQEGSGVLASARE
>NC_016625.1|WP_014251516.1|1484470_1484734_-|hypothetical-protein
MNPSRDIAAQWSERACKEHDAHAALALLDRSIALKHRRIALIRYLHAQYLGAPLEARHHDYVKAIAARLSMEALTQIAATARARFDA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_016625_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_016625_2

1473412-1473988

TypeI-E

Consensus_repeat	Method
GGTTCCTCCGCGTGTGCGGAGATAGACC	PILER-CR
GGTCTATCTCCGCACACGCGGAGGAACC	CRT
GTCTATCTCCGCACACGCGGAGGAACC	CRISPRCasFinder

9 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NC_016625_2

>merge|NC_016625|2|1473412-1473988|PILER-CR,CRT,CRISPRCasFinder
GGTCTATCTCCGCACACGCAGAGGAACCTAGACGGCTCCGTGTAACGCCCTCTGTCTTGGGAGTCTATCTCCGCACACGCGGAGGAACCTCGCAGTACTGGCCGATGGCGTAAAGCCCCCACGGTCTATCTCCGCGCACGCGGAGGAACCCGGCCTTGTGGATCATGATACGTCCCCGTGACGGGTCTATCTCCGCACACACGGAGGAACCTCGTCGATCCGATCCAGTTTCACGCAGTAGTATGGTCTATCTCCACACACGCGGAGGAACCACAGATTTCGGCCCTTACACGCTGCGCCTCGACGGTCTATCTCTGCACACGCGGAGGAACCCGCCGGGCGTCGTTCAGTACGAGGAGGGTCCGGGGTCTATCTCCGCACACGCGGAGGAACCTGAAACGATTGGTGCAATTGACGATGGATATCGGGTCTATCTCCGCACACGCGGAGGAACCGAGCGCGCTGTAGCCCATGCCCTGCGCGATGCGGGTCTATCTCCGCACACGCGGAGGAACCCCCACCCCTGACGACAGAGGGCGACTCGCTCCCGGTCTATCTCCGCACACGCGGAGGAACC

>NC_016625|2|1|1473412-1473988|PILER-CR
GGTCTATCTCCGCACACGCAGAGGAACC	TAGACGGCTCCGTGTAACGCCCTCTGTCTTGGG
AGTCTATCTCCGCACACGCGGAGGAACC	TCGCAGTACTGGCCGATGGCGTAAAGCCCCCAC
GGTCTATCTCCGCGCACGCGGAGGAACC	CGGCCTTGTGGATCATGATACGTCCCCGTGACG
GGTCTATCTCCGCACACACGGAGGAACC	TCGTCGATCCGATCCAGTTTCACGCAGTAGTAT
GGTCTATCTCCACACACGCGGAGGAACC	ACAGATTTCGGCCCTTACACGCTGCGCCTCGAC
GGTCTATCTCTGCACACGCGGAGGAACC	CGCCGGGCGTCGTTCAGTACGAGGAGGGTCCGG
GGTCTATCTCCGCACACGCGGAGGAACC	TGAAACGATTGGTGCAATTGACGATGGATATCG
GGTCTATCTCCGCACACGCGGAGGAACC	GAGCGCGCTGTAGCCCATGCCCTGCGCGATGCG
GGTCTATCTCCGCACACGCGGAGGAACC	CCCACCCCTGACGACAGAGGGCGACTCGCTCCC
GGTCTATCTCCGCACACGCGGAGGAACC

>NC_016625|2|1|1473412-1473988|CRT
GGTCTATCTCCGCACACGCAGAGGAACC	TAGACGGCTCCGTGTAACGCCCTCTGTCTTGGG
AGTCTATCTCCGCACACGCGGAGGAACC	TCGCAGTACTGGCCGATGGCGTAAAGCCCCCAC
GGTCTATCTCCGCGCACGCGGAGGAACC	CGGCCTTGTGGATCATGATACGTCCCCGTGACG
GGTCTATCTCCGCACACACGGAGGAACC	TCGTCGATCCGATCCAGTTTCACGCAGTAGTAT
GGTCTATCTCCACACACGCGGAGGAACC	ACAGATTTCGGCCCTTACACGCTGCGCCTCGAC
GGTCTATCTCTGCACACGCGGAGGAACC	CGCCGGGCGTCGTTCAGTACGAGGAGGGTCCGG
GGTCTATCTCCGCACACGCGGAGGAACC	TGAAACGATTGGTGCAATTGACGATGGATATCG
GGTCTATCTCCGCACACGCGGAGGAACC	GAGCGCGCTGTAGCCCATGCCCTGCGCGATGCG
GGTCTATCTCCGCACACGCGGAGGAACC	CCCACCCCTGACGACAGAGGGCGACTCGCTCCC
GGTCTATCTCCGCACACGCGGAGGAACC

>NC_016625|2|2|1473413-1473988|CRISPRCasFinder
GTCTATCTCCGCACACGCAGAGGAACC	TAGACGGCTCCGTGTAACGCCCTCTGTCTTGGGA
GTCTATCTCCGCACACGCGGAGGAACC	TCGCAGTACTGGCCGATGGCGTAAAGCCCCCACG
GTCTATCTCCGCGCACGCGGAGGAACC	CGGCCTTGTGGATCATGATACGTCCCCGTGACGG
GTCTATCTCCGCACACACGGAGGAACC	TCGTCGATCCGATCCAGTTTCACGCAGTAGTATG
GTCTATCTCCACACACGCGGAGGAACC	ACAGATTTCGGCCCTTACACGCTGCGCCTCGACG
GTCTATCTCTGCACACGCGGAGGAACC	CGCCGGGCGTCGTTCAGTACGAGGAGGGTCCGGG
GTCTATCTCCGCACACGCGGAGGAACC	TGAAACGATTGGTGCAATTGACGATGGATATCGG
GTCTATCTCCGCACACGCGGAGGAACC	GAGCGCGCTGTAGCCCATGCCCTGCGCGATGCGG
GTCTATCTCCGCACACGCGGAGGAACC	CCCACCCCTGACGACAGAGGGCGACTCGCTCCCG
GTCTATCTCCGCACACGCGGAGGAACC

Protein	Signature genes	Signature genes Name	Protein_function
NC_016625.1\|WP_014251510.1\|1475997_1476738_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
NC_016625.1\|WP_014251513.1\|1478536_1480153_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cls000028_cas8e_CAS-I-E	gnl\|CDD\|274192
NC_016625.1\|WP_014251515.1\|1482943_1484362_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|273327
NC_016625.1\|WP_014251502.1\|1467210_1467741_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_016625.1\|WP_014251514.1\|1480149_1482759_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NC_016625.1\|WP_014251501.1\|1465593_1466592_+\|GlxA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227311
NC_016625.1\|WP_014251512.1\|1477971_1478550_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	mkCas0196_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NC_016625.1\|WP_014251503.1\|1467779_1468976_-\|formaldehyde-dehydrogenase,-glutathione-independent	unknown	unknown	gnl\|CDD\|274314
NC_016625.1\|WP_014251497.1\|1459592_1461509_-\|(Fe-S)-binding-protein	unknown	unknown	gnl\|CDD\|371832
NC_016625.1\|WP_014251499.1\|1463616_1464147_-\|4-vinyl-reductase	unknown	unknown	gnl\|CDD\|198057
NC_016625.1\|WP_014251509.1\|1475257_1476001_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|215025
NC_016625.1\|WP_014251506.1\|1471288_1472992_+\|choline-dehydrogenase	unknown	unknown	gnl\|CDD\|235000
NC_016625.1\|WP_014251505.1\|1469807_1471277_+\|betaine-aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|183918
NC_016625.1\|WP_014251504.1\|1469191_1469779_+\|transcriptional-regulator-BetI	unknown	unknown	gnl\|CDD\|179115
NC_016625.1\|WP_014251516.1\|1484470_1484734_-\|hypothetical-protein	unknown	unknown	unknown
NC_016625.1\|WP_014251500.1\|1464183_1465155_-\|dipeptidase	unknown	unknown	gnl\|CDD\|366534
NC_016625.1\|WP_014251498.1\|1461523_1463587_-\|NADH:flavin-oxidoreductase	unknown	unknown	gnl\|CDD\|240085
NC_016625.1\|WP_014251508.1\|1474353_1475241_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NC_016625.1\|WP_014251511.1\|1476739_1477921_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NC_016625.1\|WP_014251507.1\|1474079_1474382_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244

Protein	Function_ID	Function_description	E-value
NC_016625.1\|WP_014251510.1\|1475997_1476738_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	3.09897e-44
NC_016625.1\|WP_014251513.1\|1478536_1480153_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	7.13513e-21
NC_016625.1\|WP_014251515.1\|1482943_1484362_-\|MFS-transporter	gnl\|CDD\|273327	TIGR00895, transport_protein, benzoate transport. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.58621e-74
NC_016625.1\|WP_014251502.1\|1467210_1467741_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.3322e-13
NC_016625.1\|WP_014251514.1\|1480149_1482759_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	2.5267e-85
NC_016625.1\|WP_014251501.1\|1465593_1466592_+\|GlxA-family-transcriptional-regulator	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	1.0174e-138
NC_016625.1\|WP_014251512.1\|1477971_1478550_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	4.56486e-06
NC_016625.1\|WP_014251503.1\|1467779_1468976_-\|formaldehyde-dehydrogenase,-glutathione-independent	gnl\|CDD\|274314	TIGR02819, formaldehyde_dehydrogenase_glutathione-independent, formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. [Central intermediary metabolism, One-carbon metabolism].	0
NC_016625.1\|WP_014251497.1\|1459592_1461509_-\|(Fe-S)-binding-protein	gnl\|CDD\|371832	pfam11982, DUF3483, Domain of unknown function (DUF3483). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 230 amino acids in length. This domain is found associated with pfam02754.	3.17432e-100
NC_016625.1\|WP_014251499.1\|1463616_1464147_-\|4-vinyl-reductase	gnl\|CDD\|198057	smart00989, V4R, The V4R (vinyl 4 reductase) domain is a predicted small molecular binding domain, that may bind to hydrocarbons.	1.09676e-11
NC_016625.1\|WP_014251509.1\|1475257_1476001_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	4.90115e-28
NC_016625.1\|WP_014251506.1\|1471288_1472992_+\|choline-dehydrogenase	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	0
NC_016625.1\|WP_014251505.1\|1469807_1471277_+\|betaine-aldehyde-dehydrogenase	gnl\|CDD\|183918	PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional.	0
NC_016625.1\|WP_014251504.1\|1469191_1469779_+\|transcriptional-regulator-BetI	gnl\|CDD\|179115	PRK00767, PRK00767, transcriptional regulator BetI; Validated.	8.58931e-110
NC_016625.1\|WP_014251500.1\|1464183_1465155_-\|dipeptidase	gnl\|CDD\|366534	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19).	8.2986e-122
NC_016625.1\|WP_014251498.1\|1461523_1463587_-\|NADH:flavin-oxidoreductase	gnl\|CDD\|240085	cd04734, OYE_like_3_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 3. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase. One member of this subgroup, the Sinorhizobium meliloti stachydrine utilization protein stcD, has been idenified as a putative N-methylproline demethylase.	0
NC_016625.1\|WP_014251508.1\|1474353_1475241_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.05186e-103
NC_016625.1\|WP_014251511.1\|1476739_1477921_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.5394e-120
NC_016625.1\|WP_014251507.1\|1474079_1474382_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	3.39102e-25

>NC_016625.1|WP_014251506.1|1471288_1472992_+|choline-dehydrogenase
MSVNEYDYIIVGAGSAGNVLASRLTEDADVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNWAYETEPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWASMSGLENWSYLDCLPYFRKAETRDIGPNAYHGGDGPVHVTTSKPGNNPLFAAMVEAGVQAGYPRTEDLNGYQQEGFGPMDRTVTANGRRASTARGYLDRAKHRAGLTIVTHAVTDRVLFSGKRAIGVAYVHGGQRVTAHVRREVLVCSGAIASPQLLQRSGVGRSAWLKELEIPVVHDLPGVGENLQDHLEMYMQYECKEPVSLYPALQWWNQPAIGLEWMLNGTGVGASNQFEAGGFIRTRDDDLWPNIQYHFLPVAINYNGSNPIRMHGFQAHVGSMRSPSRGRVKLKSRDPHAHPSILFNYMADTLDWREFRDAIRITRDIMRQPALARYRGRELHPSDDLKSDAELDAFVRAKAETAFHPSCSCKMGYDDMAVVDGEGRVHGMEGLRVVDASIMPQITTGNLNAPTIMLAEKIADRIRGVAALERVSTDYFVAGGRRARAVGGGVERVGVGG
>NC_016625.1|WP_014251505.1|1469807_1471277_+|betaine-aldehyde-dehydrogenase
MSAFGEQRLYIGGEYVDATSGETFDTLDPATGETLARVQQASQADIDRAVRSAREGQREWAAMTAMQRSRILRRAVELLRARNDELAAIETRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGAQIPLRESSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGVPAGVFNVVQGDGRVGAMLAEHGGIEKISFTGGVETGKKVMARAGGSTLKEVTMELGGKSPLIVFDDANLERAADIAMTANFFSAGQVCTNGTRVFVERGVIDQFEALIAQRVKRIRIGAPDDPDTNFGPLVSAAQLQKVLGFIESGKREGARLVAGGARLADGVFARGQYVEPTVFADCRDDMRIVREEIFGPVMSILAFDDEDEVIARANDTEYGLAAGVVTENLSRAHRVIHRLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLNAYTRTKSVQVELGPYQPVF
>NC_016625.1|WP_014251504.1|1469191_1469779_+|transcriptional-regulator-BetI
MPKLGMREIRRAQLIDATLHTIDQSGLAGATLASVAQRASTSTGIVSHYFGDKDGLLEATMRHVLRSLWQGTSRRRKAAKPDPRSKLRAVVAANFDVEQVNGPVMKTWLAFWSESMHKPELRRLQRVNTRRLYSNLCADFARALTKPAARRAASGLAALIDGLWLRGALAGEPFDTKGALRVAYEYIDLVLEARG
>NC_016625.1|WP_014251503.1|1467779_1468976_-|formaldehyde-dehydrogenase,-glutathione-independent
MSSNRGVVYLGQGKVEVQSIDYPKMVDPRGRDIGHGVILRVVTTNICGSDQHMVRGRTTAEVGLVLGHEITGEVIEIGRDVETLSIGDLVSVPFNVACGRCPTCKSQHTGVCLNVNPSRAGGAYGYVDMGGWIGGQAEYVMVPYADFNLLKFPDKAQAMSKIRDLTCLSDILPTGYHGAVMAGVGPGSTVYIAGAGPVGMAAAASARLLGAACTIVGDMNEERLAHARAMGFETINLSKDATLGEQIEQLLGKPEVDCAVDCVGFEAHGHGSDSGHEAPATVLNSLMEITKAAGAIGIPGLYVTDDPGAVDAAAKKGALSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILWDRLPIADIVNVSVVSLDEAPEGYRKFDGGAPRKFVIDPHGLLKAA
>NC_016625.1|WP_014251502.1|1467210_1467741_-|GNAT-family-N-acetyltransferase
MTADYLRTALTFRLAVADDAAEIARIHVEAWQAAYRSIFPSAYLDSLSIPKRQALWTQLIARGMPRVVLAQRDEVTLGWIAWGASRDHDSKTTDAEIEAIYIDPLHWRQGAGRMLMDEAINAAASEGYREMTLWALEENARGLRFYKALGFALDGVFRTERVGGCEVCETRLRVAI
>NC_016625.1|WP_014251501.1|1465593_1466592_+|GlxA-family-transcriptional-regulator
MSSDRTASLSHFAFMPLPNFTMIAFTNAIEVLRMANYLTGQPLYRWSLVSPEGGPVTASNGLSVDTGPVECVGQPDIVFVVGGIDVQRSTTPEHLSALRRFARTGSVLGSLCTGTYALARAGLLAGYACAIHWENMSALKEEFPDTRFLKELFVIDRDRVTCTGGVAPLDMMLNLIAARVGTARVTQIAEQFIVEHVRDTSAQQRMPLVARLGSANKSLFEVISLMENNIEEPLSREELARLAGMSQRQLQRLFREHLGMTPTHYYLTLRLRRARELLLQTDMSIMHITMACGFQSACHFSKSYRDAFGTAPTRERRKQVPPLASVSSVMVA
>NC_016625.1|WP_014251500.1|1464183_1465155_-|dipeptidase
MSTLHDNSIIIDGLNISKFERSVFEDMRKGNVTAVNCTVSVWEDFQKTIDNIAEMKQQIREYSEILTLVRTTDDILRAKKENKTGIIFGFQNSYAFEDNLGYIEVFKELGVNVVQLCYNTQNLVGTGCYEPDGGLSGYGKEVIHEMNRVGIVVDLSHVGAKTSSDAIACSKKPVTYSHCCPSGLKDHPRNKSDDQLREIADANGFVGVTMFSPFLKKGPDATVDDYLEAIDYVINVIGEDKVGIGTDFTQGYSTEFFDWITHDKGRYRRLTNFGKVVNPEGIRTIGEFPNLTAAMEKAGWSETRIKKVMGENWMRYFGEVWNV
>NC_016625.1|WP_014251499.1|1463616_1464147_-|4-vinyl-reductase
MQPQLPIDVDPQTGVWTTDALPMLYVPRHFFTNNHVAVEEALGLETYAEILYKAGYKSAYHWCDKEAEKHGISGMATFEHYLKRLSQRGWGLFDIVEADPETSHARIHLRNSSFVLQQPGKQGKLCYMFAGWFAGAMDWVNDTAPEGAKKGPRSKSIETQCAAEGHAHCVFEVSPL
>NC_016625.1|WP_014251498.1|1461523_1463587_-|NADH:flavin-oxidoreductase
MRYPNLFKPLQLNKLTLRNRIVSTAHAEVYAEPGGLPGDRYIRYYEEKAKGGVGLAVCGGSSPVSIDSPQGWWKSVNLSTDKVIDPLARLAEAMHRHGAFIMIQATHMGRRSAWHGEHWPHLMSPSGVREPVHRGNAKIIEVEEIKRIIEDFAAAAKRVKDAGMDGIEISAAHQHLIDQFWSPRTNFRTDEWGGSLENRLRFGTEVLKAVREAVGADFCVGLRMCGDEFHEDGLSHENLKEIAQAMSETGLIDYIGVIGSGADTHNTLANCMPPMALPPEPFVHLAAGIKTVTKLPIMHAQSIRDAGQAERLLANGMVDLVGMTRAQIADPHMVIKIRDGREDEIKQCVGANYCIDRQYNGLDVLCVQNAATSREETMPHVIEKTRGPKRKVVVVGAGPAGLEAARVARSRGHDVVLFEKNDYVGGQIMLAAKAPQREQMAGIVRWFDMETKRLGVDRRLGVAADDKMIMAEKPDIVVLATGGSSFTDQVPAWGVEQGLAVSSWDILSGKVEPGKNVLVYDGVSTHAGAGVADFIASRGNNVEIVTPDVKVADDTGGTTFPIFYRRLYAQGVIHTPNYWLDKVYEEDGKKIAVIRNEYTEEQEERAVDQVVIENGITPNDALYWKLKPESLNRGQIDMHTLFASQPQPSLSEELGNGRFLLFRVGDCISMHNIHSAIYDSLRLCKDF
>NC_016625.1|WP_014251497.1|1459592_1461509_-|(Fe-S)-binding-protein
MNPVFVITALLWLSMAGLAFALLKRAAYWREGRATTAGAYGWANLLTIPKRYFVDLHHVVARDPYIAKTHVATAGGAILAMALVFINYGLAIYSVWLDRAIFLAAIIMFVGAMFVYKRRRAKDVPARLSHGPWDSLPLLLGSFAAGLALFTLLPASWMSGSLAVIIALLIAAGAYTMTFGAAQGGPMKHAMAGLLHLAFHPRQERFHAKTQHEHEAVPPTALKKPVLDAKEYGVGKPVEFRWNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMVGGSDSQYAGSPTPGIPVGKHSGGPAKPLISQMIEADTIWSCTTCRACVQECPMLIEHVDAIVDMRRNQTLVEGDVPGKGPITLANLRETGSQSGYDIGARYDWSVDLQVQVAQPGRPVDVLLIAGEGAFDMRYQRTLRALAKVMNKAGVDYAVLGGVETDTGDTARRLGDEATFQQCASKLMNTLSQYQFRRIVTADPHVLHSLRNEYRALGGYYEVQHHTAFMAELVATGKLTPKAAAVLADKKITYHDPCYLGRYNGETEAPRKLLKTIGIKVVEMERHGMRARCCGGGGGAPLTDIPGKQRIPDIRIADAKSIGAEVVAVGCPQCTAMLEGVVGPRPEVLDVAELVAAALE
>NC_016625.1|WP_014251507.1|1474079_1474382_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MALVVVVTSDVADRFRGFLGSVMLEVSAGLYVAPRMNKGVRERTWSVLADWHGHEPRGSVVMVWRDLDAVGGIGISHLGAPPRELVEVDGMYVVRRMMVG
>NC_016625.1|WP_014251508.1|1474353_1475241_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MLKGRLGLDTSRVPHADRHGLLWLERGTLNVIDGCLSFASGQHVDQIPHQQVSMILLGPGSSVTHDALRLLARHGTLLAAVGVDGVRTYTAPPLMPDRSDVARRQAELWGNARRRLSVARHMYALRLGEVLPHRDLDTLRGIEGARVKTIYRLRAEQFGIDWEGRRYDRANPDAADLPNQAINHAATAVQAAAAIAVQALAAIPQLGFIHEDSGQAFVLDIADLFRDDVTLSIAFAAVKEAQRCEHPIDRLVRREAARVFRKKAVIPAMIDRVKQVLRVDEKREAGDGAGRRGDE
>NC_016625.1|WP_014251509.1|1475257_1476001_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MTTLNLIHCEPDLRRLVSWAARQDWIPPGGDIGYALHAALGSAFGDRAPKPFYYRDERSGLLAYSSSSADELREAASLASPDIAALLGLDAVRGGGGLSIREFPARWTKGRVLGFEVRVCPVVRDKEGHQHDAYRAALDRAEDKAEVQREPVYGEWLARQFAATNAASIIESRMMRFQLTTSVRRTKAAGSNDKRIARHVGGPDAVFRGHLRVEDPQAFTSLLVRGVGRHRAFGFGMLQLRPASIAT
>NC_016625.1|WP_014251510.1|1475997_1476738_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MRRHLLMRLRAPLVAFGGEAIDNYGVIRDFPALSMLTGLIGNALGWDRSDFALLDGLQARLVMGTRLDNGGERLADFQTAQIGANDGGWTTLGEPEKRRGGEDSYKSPHLRYRDYHARLDALVALRLEPADEEPTLEHIAHALDHPKRPLFIGRKPCLPSARLVVGMVDASDVLDALQRAPSPDEREFRFQWPRKEGSLQNARALDIRDKRRWKTGVHGGRRAVFEGTGPHIAPCASLSTLPELPA
>NC_016625.1|WP_014251511.1|1476739_1477921_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MPQARFIQIHTLQSYPAALLNRDDAGLAKRLPMGDTIRTRISSQCLKRHWRVADDHHSLASLDVPMAIRSRITLKLIRDELIRQNVPEALAQAAAEALRHEGLLDKAGKDLKGKEALETGQAVLLGKAEIDYLVARCAALSHDYKEETALKAAIKTFLKEEKSNIEALKHGSGLESALFGRMVTSDVLASRDAAVYVAHAFTVHEAQVENDYFTVVDDLLRETGERGSAGIFDTELASGLYYGYVVVDVPQLVANLEGIGVRECFDAPAERRALAGEVVHNLLHLIATVSPGAKRGSTAPFGHASLMLVETGDWQPRTLAGAFETALSMEPGTNVRKKAIDTLADELQKHDAAYGAPPARRFMSLDDANMPGAERVSLAELGKWTQARIVEGA
>NC_016625.1|WP_014251512.1|1477971_1478550_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MTSVEDTALGSRHSLYAQIGAITGFIKAGKENEGSLKADYVALARLDPNAQTLTVQQIAALTRALQRAKVECDRFSLKQWRRWGLIAHGIALSVHCTPDEAAPRLGQQLQLASVSEARVTRLLNARGEALFQNLPRVVRLMASRGVAPNWIELGTLILNEGAVDSLRKRIAERTRIAIVRDYIRARLQSERK
>NC_016625.1|WP_014251513.1|1478536_1480153_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MTLQLNLLDDRLFRYCDVDDQSHDASLPELLVALGRDTVCDFPALRSHQCHPWHAFLVCLAAIALHEAKRDELWNTPEEWRRALLALTPDHPDGAAFSLVTPDDRPAFLQAPCKSGETRTWKKRLLTPDAVDMLITSKNHDMKAARMIHADPEDWVYALVSLQTQEGFLGAGNYGISRMNGGFASRPALGVVPAGHVGKRWARDTRLLLEQHASIAKQCDLKSKGGLALVWLRPWDGTSSLSLGELDPFYIEICRRVRLTMHGTRLVALATSSKTARIAAKERNGVTGDAWTPVNIAEAKALSITARGFDYRLASTLAFPKEFERTFERTLASTLLEDDGETGLYLLAQGITRGQGKTEGYHERRIPTSPRIRDAMRMRHTDEIAKRATDRIAAIADVRRVLWIAMCNLLGNGDSSVSDDTKKKAGDFSRRFEHEEDARFFDDLIEEVESHNEKEANDKWIGELVDRAETVLERAFVAGPRSAERRYRAQGGALSCFHSFMRTEKHVAQRIVGVLKRRDEAPRDARPDSLEEVEHDVS
>NC_016625.1|WP_014251514.1|1480149_1482759_-|CRISPR-associated-helicase/endonuclease-Cas3
MQEKEGKQHVAWGKRSREGDENAPFHPLCDHMLDVAACFVALTAKGGRIREAMHATAKRVLDDRDIARLAVFVFLHDFGKANSGFQAKRWRTGAPRGWPLHAGHGVEARLALELNENLLAGLPLDEMSAWGGAAFDLLLASLGHHGRPVREPVGIDPHLWQPVFAADGREVYNPAATLRQIGDRLRRDLPRAFEPGGEWLPDLPSFVHLFAGLVQLADWLGSSKQFFPYSEPGVERTFDEALRYATEAVGRVGLDVTHLRAAMRNARITFESAFSVSSPRPMQAALGDADLGPLLILESETGSGKTEAALWRFAKLFEAGKVDSLYFALPTRVAAVQVYKRVRDFVKCLWPSDAPVVVRALPGYESADDSDKIALPHYEVQWSDNPDDIVASKRWAAESPKRFLAATIAVGTIDQALLAGLSVRHAHLRHAALSRSLLVVDEVHASDTYMSELLEHLLKAHLATGGHALLLSATLGSRQRVRFQSVTNPPCIEEACAVPYPALTDGARISKLGRSGAKKHVHWQTCRAIDDFTHVARIAVDAARQGARVLIVRNTVPSAIATQEAIESMVDDRAWLFDVNGVATLHHSRFSVQDRPRLDAEVEARIGKKRDGMKPCIVVGTQTLEQSLDLDADLLITDICPMDVLLQRIGRLHRHDRPDAERPEGFRQARVWVLIPESGSFDAYLQRPRHGLGRLRNGGGVYPDLRMIEATRRLIEARGEREIPDDNRELVERATHPDCLDAVAAEFGPAWQALSQQLDGGKSAERVVARLHALDYDASFEALAFPGNDERVATRLGAKDRLIRFDPPVRGPFGIDVREIAMRHHMLPDDLDPDAAPSDIAPCDDGFEFSLGGAHFTYDRFGVRKRRLA
>NC_016625.1|WP_014251515.1|1482943_1484362_-|MFS-transporter
MSVAREPRASAAARLERLPFSGYHRTIFIIIAIAFFFDSVDLGTMTFVLGSIKTEFGLSTATAGLVASASFFGMVLGAAVAGLLADRFGRRPVFQWSMVLWGLASYLCSTAQSVDALIFYRVLLGIGMGMEFPIAQTLLSEFVPTASRGRLIALMDGFWPLGFIASGVVSYFVLPTFGWRTEFALLAIPAVFVLIVRRVVPESPRWLEHRGRIDEADRVLADVEVRVMKAKGLSRLPALSMLAEPAAKHGSGAFREIWSAAYRRRTVMVWMLWFFALLGFYGLTSWLGALMQQAGFAVTKSVLYTVLISLGGVPGFLCAAWLVERWGRKPTCIASLVGSGVMAYVYGQTALHAETPTLLICAGLAMQFFLFAMWAVLYTYTPELYGTGARATGSGFASAIGRVGSLIGPYVVGVVLPVFGQGGVFSLGAACFVVAASAVWVLGIETKGLTLETLVSEAEEQEGSGVLASARE
>NC_016625.1|WP_014251516.1|1484470_1484734_-|hypothetical-protein
MNPSRDIAAQWSERACKEHDAHAALALLDRSIALKHRRIALIRYLHAQYLGAPLEARHHDYVKAIAARLSMEALTQIAATARARFDA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NC_010899	Vibrio cholerae strain G1.1 plasmid pVCG1.2, complete sequence	1919-1951	1	0.97
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP034755	Enterobacter hormaechei subsp. hoffmannii strain Eh1 plasmid p1, complete sequence	31542-31574	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_LN879548	Comamonas testosteroni P19 isolate C19 plasmid II	8212-8244	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP015374	Pandoraea pnomenusa strain MCB032 plasmid unnamed 3, complete sequence	5055-5087	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP020527	Enterobacter cloacae strain 109 plasmid unnamed2, complete sequence	21530-21562	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NC_016053	Xanthomonas arboricola pv. pruni str. CFBP 5530 plasmid pXap41, complete sequence	25945-25977	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_LR594694	Variovorax sp. WDL1 plasmid 6	9195-9227	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP021899	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0050 plasmid unitig_4_pilon, complete sequence	30042-30074	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP011628	Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-16, complete sequence	653-685	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP027606	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0093 plasmid unnamed2, complete sequence	34510-34542	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP010894	Pseudomonas sp. MRSN12121 plasmid, complete sequence	2987-3019	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NC_019888	Klebsiella pneumoniae strain BK31551 plasmid pBK31551, complete sequence	26027-26059	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP033195	Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence	66729-66761	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	6229-6261	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	9072-9104	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	12003-12035	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	141524-141556	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP026110	Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence	1193-1225	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP026110	Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence	98397-98429	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	CP000620	Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence	5761-5793	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	CP000620	Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence	32862-32894	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	CP000620	Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence	35787-35819	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	CP000620	Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence	69997-70029	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	CP000620	Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence	88658-88690	2	0.939
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP033202	Xanthomonas oryzae pv. oryzae strain BXO1 plasmid pBXO1-1, complete sequence	30056-30088	2	0.939
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NC_010899	Vibrio cholerae strain G1.1 plasmid pVCG1.2, complete sequence	1919-1952	2	0.941
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP033195	Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence	16544-16576	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP033195	Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence	35940-35972	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP033195	Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence	63800-63832	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	4798-4830	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	28355-28387	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	117787-117819	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP041964	Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1	8577-8609	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP041964	Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1	52489-52521	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP018464	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence	15151-15183	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP018464	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence	146446-146478	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP018464	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence	150454-150486	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP018464	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence	153267-153299	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP018464	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence	169663-169695	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP041782	Xanthomonas citri pv. glycines strain 8ra plasmid unnamed1	4518-4550	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP041782	Xanthomonas citri pv. glycines strain 8ra plasmid unnamed1	31137-31169	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP041782	Xanthomonas citri pv. glycines strain 8ra plasmid unnamed1	57755-57787	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP026335	Xanthomonas citri pv. glycines strain EB08 plasmid pXAG27.EB08, complete sequence	6782-6814	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NC_010872	Xanthomonas axonopodis pv. glycines strain AG1 plasmid pAG1, complete sequence	6884-6916	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NC_010876	Xanthomonas axonopodis pv. glycines strain 8ra plasmid pXAG81, complete sequence	6884-6916	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP026110	Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence	4022-4054	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP026110	Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence	37188-37220	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP026110	Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence	54186-54218	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP026110	Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence	77945-77977	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP026110	Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence	82045-82077	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP041962	Xanthomonas citri pv. glycines strain 1018 plasmid unnamed1	1930-1962	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP041962	Xanthomonas citri pv. glycines strain 1018 plasmid unnamed1	27404-27436	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP041966	Xanthomonas citri pv. glycines strain K2 plasmid unnamed1, complete sequence	8707-8739	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	CP000620	Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence	8977-9009	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP017189	Xanthomonas citri pv. glycines str. 8ra plasmid pXAG27.8ra, complete sequence	6782-6814	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP015973	Xanthomonas citri pv. glycines str. 12-2 plasmid pXAG27.12-2, complete sequence	6782-6814	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP033202	Xanthomonas oryzae pv. oryzae strain BXO1 plasmid pBXO1-1, complete sequence	10805-10837	3	0.909
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP033202	Xanthomonas oryzae pv. oryzae strain BXO1 plasmid pBXO1-1, complete sequence	32986-33018	3	0.909
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_LN879548	Comamonas testosteroni P19 isolate C19 plasmid II	8212-8245	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP020527	Enterobacter cloacae strain 109 plasmid unnamed2, complete sequence	21530-21563	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP011628	Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-16, complete sequence	653-686	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP027606	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0093 plasmid unnamed2, complete sequence	34510-34543	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP010894	Pseudomonas sp. MRSN12121 plasmid, complete sequence	2987-3020	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NC_019888	Klebsiella pneumoniae strain BK31551 plasmid pBK31551, complete sequence	26027-26060	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP034755	Enterobacter hormaechei subsp. hoffmannii strain Eh1 plasmid p1, complete sequence	31541-31574	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP015374	Pandoraea pnomenusa strain MCB032 plasmid unnamed 3, complete sequence	5054-5087	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NC_016053	Xanthomonas arboricola pv. pruni str. CFBP 5530 plasmid pXap41, complete sequence	25944-25977	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_LR594694	Variovorax sp. WDL1 plasmid 6	9194-9227	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP021899	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0050 plasmid unitig_4_pilon, complete sequence	30041-30074	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP033195	Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence	66729-66762	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	6229-6262	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	9072-9105	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	12003-12036	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	141524-141557	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP026110	Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence	1192-1225	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP026110	Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence	98396-98429	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	CP000620	Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence	5760-5793	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	CP000620	Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence	32861-32894	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	CP000620	Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence	35786-35819	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	CP000620	Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence	69996-70029	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	CP000620	Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence	88657-88690	3	0.912
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP033202	Xanthomonas oryzae pv. oryzae strain BXO1 plasmid pBXO1-1, complete sequence	30055-30088	3	0.912
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP021139	Sulfuriferula sp. AH1 plasmid unnamed, complete sequence	23161-23193	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NC_022540	Xanthomonas citri pv. fuscans plasmid plb, complete sequence	12824-12856	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	LS423453	Candidatus Nitrotoga sp. KNB genome assembly, plasmid: _1	2683-2715	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	LC155906	Achromobacter xylosoxidans plasmid pKUN4507_1 DNA, complete sequence, strain: KUN4507	14437-14469	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP011166	Xanthomonas citri pv. aurantifolii strain FDC 1609 plasmid pXfc46, complete sequence	2665-2697	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP021007	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pC, complete sequence	3619-3651	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP021007	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pC, complete sequence	42486-42518	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP021009	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pB, complete sequence	16006-16038	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP020994	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pC, complete sequence	5161-5193	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP020994	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pC, complete sequence	47209-47241	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP020995	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pB, complete sequence	4817-4849	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP020995	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pB, complete sequence	24331-24363	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP021020	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pC, complete sequence	46584-46616	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP012056	Xanthomonas citri pv. fuscans strain ISO12C3 plasmid pXff45, complete sequence	23430-23462	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP012054	Xanthomonas citri pv. fuscans strain ISO118C1 plasmid pXff45, complete sequence	23430-23462	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP021003	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pC, complete sequence	31741-31773	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP021005	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pB, complete sequence	14796-14828	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP012052	Xanthomonas citri pv. fuscans strain ISO118C5 plasmid pXff45, complete sequence	23430-23462	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	CP021014	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP7767 plasmid pC, complete sequence	19892-19924	4	0.879
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NC_022542	Xanthomonas citri pv. fuscans plasmid plc, complete sequence	21964-21996	4	0.879
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP033195	Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence	16544-16577	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP033195	Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence	35940-35973	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP033195	Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence	63800-63833	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	4798-4831	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	28355-28388	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	117787-117820	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP041964	Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1	8577-8610	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP041964	Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1	52489-52522	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP041782	Xanthomonas citri pv. glycines strain 8ra plasmid unnamed1	4518-4551	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP041782	Xanthomonas citri pv. glycines strain 8ra plasmid unnamed1	31137-31170	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP041782	Xanthomonas citri pv. glycines strain 8ra plasmid unnamed1	57755-57788	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP026335	Xanthomonas citri pv. glycines strain EB08 plasmid pXAG27.EB08, complete sequence	6782-6815	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NC_010872	Xanthomonas axonopodis pv. glycines strain AG1 plasmid pAG1, complete sequence	6884-6917	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NC_010876	Xanthomonas axonopodis pv. glycines strain 8ra plasmid pXAG81, complete sequence	6884-6917	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP017189	Xanthomonas citri pv. glycines str. 8ra plasmid pXAG27.8ra, complete sequence	6782-6815	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP015973	Xanthomonas citri pv. glycines str. 12-2 plasmid pXAG27.12-2, complete sequence	6782-6815	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP018464	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence	15150-15183	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP018464	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence	146445-146478	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP018464	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence	150453-150486	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP018464	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence	153266-153299	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP018464	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence	169662-169695	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP026110	Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence	4021-4054	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP026110	Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence	37187-37220	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP026110	Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence	54185-54218	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP026110	Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence	77944-77977	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP026110	Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence	82044-82077	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP041962	Xanthomonas citri pv. glycines strain 1018 plasmid unnamed1	1929-1962	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP041962	Xanthomonas citri pv. glycines strain 1018 plasmid unnamed1	27403-27436	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP041966	Xanthomonas citri pv. glycines strain K2 plasmid unnamed1, complete sequence	8706-8739	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	CP000620	Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence	8976-9009	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP033202	Xanthomonas oryzae pv. oryzae strain BXO1 plasmid pBXO1-1, complete sequence	10804-10837	4	0.882
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP033202	Xanthomonas oryzae pv. oryzae strain BXO1 plasmid pBXO1-1, complete sequence	32985-33018	4	0.882
NC_016625_2	2.9\|1473928\|33\|NC_016625\|PILER-CR,CRT	1473928-1473960	33	NZ_CP016441	Bordetella pseudohinzii strain HI4681 plasmid unnamed1, complete sequence	52021-52053	5	0.848
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	LC155906	Achromobacter xylosoxidans plasmid pKUN4507_1 DNA, complete sequence, strain: KUN4507	14437-14470	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP021007	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pC, complete sequence	3619-3652	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP021007	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pC, complete sequence	42486-42519	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP021009	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pB, complete sequence	16006-16039	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP020994	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pC, complete sequence	5161-5194	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP020994	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pC, complete sequence	47209-47242	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP021020	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pC, complete sequence	46584-46617	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP021139	Sulfuriferula sp. AH1 plasmid unnamed, complete sequence	23160-23193	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NC_022540	Xanthomonas citri pv. fuscans plasmid plb, complete sequence	12823-12856	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	LS423453	Candidatus Nitrotoga sp. KNB genome assembly, plasmid: _1	2682-2715	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP011166	Xanthomonas citri pv. aurantifolii strain FDC 1609 plasmid pXfc46, complete sequence	2664-2697	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP020995	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pB, complete sequence	4816-4849	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP020995	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pB, complete sequence	24330-24363	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP012056	Xanthomonas citri pv. fuscans strain ISO12C3 plasmid pXff45, complete sequence	23429-23462	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP012054	Xanthomonas citri pv. fuscans strain ISO118C1 plasmid pXff45, complete sequence	23429-23462	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP021003	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pC, complete sequence	31740-31773	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP021005	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pB, complete sequence	14795-14828	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP012052	Xanthomonas citri pv. fuscans strain ISO118C5 plasmid pXff45, complete sequence	23429-23462	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	CP021014	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP7767 plasmid pC, complete sequence	19891-19924	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NC_022542	Xanthomonas citri pv. fuscans plasmid plc, complete sequence	21963-21996	5	0.853
NC_016625_2	2.18\|1473928\|34\|NC_016625\|CRISPRCasFinder	1473928-1473961	34	NZ_CP016441	Bordetella pseudohinzii strain HI4681 plasmid unnamed1, complete sequence	52020-52053	6	0.824
NC_016625_1	1.2\|1473098\|34\|NC_016625\|CRISPRCasFinder	1473098-1473131	34	NZ_CP024895	Amycolatopsis sp. AA4 plasmid unnamed1, complete sequence	21803-21836	8	0.765
NC_016625_1	1.4\|1473220\|34\|NC_016625\|CRISPRCasFinder	1473220-1473253	34	NZ_CP045294	Paenibacillus guangzhouensis strain KCTC 33171 plasmid unnamed1, complete sequence	7469-7502	8	0.765
NC_016625_1	1.5\|1473281\|34\|NC_016625\|CRISPRCasFinder	1473281-1473314	34	NZ_LR536452	Methylocella tundrae isolate MTUNDRAET4 annotated genome plasmid 3	113883-113916	8	0.765
NC_016625_2	2.4\|1473623\|33\|NC_016625\|PILER-CR,CRT	1473623-1473655	33	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1814496-1814528	8	0.758
NC_016625_2	2.4\|1473623\|33\|NC_016625\|PILER-CR,CRT	1473623-1473655	33	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	610570-610602	8	0.758
NC_016625_2	2.6\|1473745\|33\|NC_016625\|PILER-CR,CRT	1473745-1473777	33	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1462981-1463013	9	0.727
NC_016625_2	2.6\|1473745\|33\|NC_016625\|PILER-CR,CRT	1473745-1473777	33	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1444491-1444523	9	0.727
NC_016625_2	2.6\|1473745\|33\|NC_016625\|PILER-CR,CRT	1473745-1473777	33	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	640422-640454	9	0.727
NC_016625_2	2.13\|1473623\|34\|NC_016625\|CRISPRCasFinder	1473623-1473656	34	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	610569-610602	9	0.735
NC_016625_2	2.13\|1473623\|34\|NC_016625\|CRISPRCasFinder	1473623-1473656	34	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1814496-1814529	9	0.735
NC_016625_1	1.2\|1473098\|34\|NC_016625\|CRISPRCasFinder	1473098-1473131	34	NZ_CP009293	Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence	312239-312272	10	0.706
NC_016625_2	2.5\|1473684\|33\|NC_016625\|PILER-CR,CRT	1473684-1473716	33	NZ_CP007516	Rubrobacter radiotolerans strain RSPS-4 plasmid 2, complete sequence	105951-105983	10	0.697
NC_016625_2	2.15\|1473745\|34\|NC_016625\|CRISPRCasFinder	1473745-1473778	34	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1462981-1463014	10	0.706
NC_016625_2	2.15\|1473745\|34\|NC_016625\|CRISPRCasFinder	1473745-1473778	34	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1444491-1444524	10	0.706
NC_016625_2	2.15\|1473745\|34\|NC_016625\|CRISPRCasFinder	1473745-1473778	34	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	640421-640454	10	0.706
NC_016625_2	2.14\|1473684\|34\|NC_016625\|CRISPRCasFinder	1473684-1473717	34	NZ_CP007516	Rubrobacter radiotolerans strain RSPS-4 plasmid 2, complete sequence	105951-105984	11	0.676

1. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NC_010899 (Vibrio cholerae strain G1.1 plasmid pVCG1.2, complete sequence) position: , mismatch: 1, identity: 0.97

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccctgacgacagagggcgactcgctccc	Protospacer
* *******************************

2. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP034755 (Enterobacter hormaechei subsp. hoffmannii strain Eh1 plasmid p1, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacccctgacgacagagggcgactcgctccc	Protospacer
. *******************************

3. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_LN879548 (Comamonas testosteroni P19 isolate C19 plasmid II) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacccctgacgacagagggcgactcgctccc	Protospacer
. *******************************

4. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP015374 (Pandoraea pnomenusa strain MCB032 plasmid unnamed 3, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacccctgacgacagagggcgactcgctccc	Protospacer
. *******************************

5. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP020527 (Enterobacter cloacae strain 109 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacccctgacgacagagggcgactcgctccc	Protospacer
. *******************************

6. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NC_016053 (Xanthomonas arboricola pv. pruni str. CFBP 5530 plasmid pXap41, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacccctgacgacagagggcgactcgctccc	Protospacer
. *******************************

7. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_LR594694 (Variovorax sp. WDL1 plasmid 6) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacccctgacgacagagggcgactcgctccc	Protospacer
. *******************************

8. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP021899 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0050 plasmid unitig_4_pilon, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacccctgacgacagagggcgactcgctccc	Protospacer
. *******************************

9. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP011628 (Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-16, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacccctgacgacagagggcgactcgctccc	Protospacer
. *******************************

10. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP027606 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0093 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacccctgacgacagagggcgactcgctccc	Protospacer
. *******************************

11. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP010894 (Pseudomonas sp. MRSN12121 plasmid, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacccctgacgacagagggcgactcgctccc	Protospacer
. *******************************

12. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NC_019888 (Klebsiella pneumoniae strain BK31551 plasmid pBK31551, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacccctgacgacagagggcgactcgctccc	Protospacer
. *******************************

13. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP033195 (Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccc	Protospacer
* *****.*************************

14. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP022994 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccc	Protospacer
* *****.*************************

15. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP022994 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccc	Protospacer
* *****.*************************

16. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP022994 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccc	Protospacer
* *****.*************************

17. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP022994 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccc	Protospacer
* *****.*************************

18. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP026110 (Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccc	Protospacer
* *****.*************************

19. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP026110 (Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccc	Protospacer
* *****.*************************

20. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to CP000620 (Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccc	Protospacer
* *****.*************************

21. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to CP000620 (Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccc	Protospacer
* *****.*************************

22. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to CP000620 (Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccc	Protospacer
* *****.*************************

23. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to CP000620 (Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccc	Protospacer
* *****.*************************

24. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to CP000620 (Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccc	Protospacer
* *****.*************************

25. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP033202 (Xanthomonas oryzae pv. oryzae strain BXO1 plasmid pBXO1-1, complete sequence) position: , mismatch: 2, identity: 0.939

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccc	Protospacer
* *****.*************************

26. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NC_010899 (Vibrio cholerae strain G1.1 plasmid pVCG1.2, complete sequence) position: , mismatch: 2, identity: 0.941

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccctgacgacagagggcgactcgctcccc	Protospacer
* *******************************

27. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP033195 (Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcct	Protospacer
* *****.************************.

28. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP033195 (Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgcgccc	Protospacer
* *****.********************* ***

29. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP033195 (Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgcgccc	Protospacer
* *****.********************* ***

30. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP022994 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcct	Protospacer
* *****.************************.

31. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP022994 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcct	Protospacer
* *****.************************.

32. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP022994 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcct	Protospacer
* *****.************************.

33. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP041964 (Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacctctgacgacagagggcgactcgctccc	Protospacer
. ****.**************************

34. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP041964 (Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacctctgacgacagagggcgactcgctccc	Protospacer
. ****.**************************

35. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP018464 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacccttgacgacagagggcgactcgctccc	Protospacer
. *****.*************************

36. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP018464 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacccttgacgacagagggcgactcgctccc	Protospacer
. *****.*************************

37. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP018464 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacccttgacgacagagggcgactcgctccc	Protospacer
. *****.*************************

38. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP018464 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacccttgacgacagagggcgactcgctccc	Protospacer
. *****.*************************

39. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP018464 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcaccctcgacgacagagggcgactcgctccc	Protospacer
* *****..************************

40. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP041782 (Xanthomonas citri pv. glycines strain 8ra plasmid unnamed1) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacctctgacgacagagggcgactcgctccc	Protospacer
. ****.**************************

41. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP041782 (Xanthomonas citri pv. glycines strain 8ra plasmid unnamed1) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacctctgacgacagagggcgactcgctccc	Protospacer
. ****.**************************

42. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP041782 (Xanthomonas citri pv. glycines strain 8ra plasmid unnamed1) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacctctgacgacagagggcgactcgctccc	Protospacer
. ****.**************************

43. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP026335 (Xanthomonas citri pv. glycines strain EB08 plasmid pXAG27.EB08, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacctctgacgacagagggcgactcgctccc	Protospacer
. ****.**************************

44. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NC_010872 (Xanthomonas axonopodis pv. glycines strain AG1 plasmid pAG1, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacctctgacgacagagggcgactcgctccc	Protospacer
. ****.**************************

45. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NC_010876 (Xanthomonas axonopodis pv. glycines strain 8ra plasmid pXAG81, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacctctgacgacagagggcgactcgctccc	Protospacer
. ****.**************************

46. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP026110 (Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcct	Protospacer
* *****.************************.

47. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP026110 (Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcct	Protospacer
* *****.************************.

48. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP026110 (Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcct	Protospacer
* *****.************************.

49. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP026110 (Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcct	Protospacer
* *****.************************.

50. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP026110 (Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcct	Protospacer
* *****.************************.

51. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP041962 (Xanthomonas citri pv. glycines strain 1018 plasmid unnamed1) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacctctgacgacagagggcgactcgctccc	Protospacer
. ****.**************************

52. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP041962 (Xanthomonas citri pv. glycines strain 1018 plasmid unnamed1) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacctctgacgacagagggcgactcgctccc	Protospacer
. ****.**************************

53. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP041966 (Xanthomonas citri pv. glycines strain K2 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacctctgacgacagagggcgactcgctccc	Protospacer
. ****.**************************

54. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to CP000620 (Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcct	Protospacer
* *****.************************.

55. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP017189 (Xanthomonas citri pv. glycines str. 8ra plasmid pXAG27.8ra, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacctctgacgacagagggcgactcgctccc	Protospacer
. ****.**************************

56. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP015973 (Xanthomonas citri pv. glycines str. 12-2 plasmid pXAG27.12-2, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacctctgacgacagagggcgactcgctccc	Protospacer
. ****.**************************

57. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP033202 (Xanthomonas oryzae pv. oryzae strain BXO1 plasmid pBXO1-1, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcct	Protospacer
* *****.************************.

58. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP033202 (Xanthomonas oryzae pv. oryzae strain BXO1 plasmid pBXO1-1, complete sequence) position: , mismatch: 3, identity: 0.909

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
cgcacccttgacgacagagggcgactcgcgccc	Protospacer
* *****.********************* ***

59. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_LN879548 (Comamonas testosteroni P19 isolate C19 plasmid II) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacccctgacgacagagggcgactcgctcccc	Protospacer
. *******************************

60. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP020527 (Enterobacter cloacae strain 109 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacccctgacgacagagggcgactcgctcccc	Protospacer
. *******************************

61. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP011628 (Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-16, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacccctgacgacagagggcgactcgctcccc	Protospacer
. *******************************

62. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP027606 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0093 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacccctgacgacagagggcgactcgctcccc	Protospacer
. *******************************

63. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP010894 (Pseudomonas sp. MRSN12121 plasmid, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacccctgacgacagagggcgactcgctccct	Protospacer
. *******************************

64. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NC_019888 (Klebsiella pneumoniae strain BK31551 plasmid pBK31551, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacccctgacgacagagggcgactcgctcccc	Protospacer
. *******************************

65. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP034755 (Enterobacter hormaechei subsp. hoffmannii strain Eh1 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacccctgacgacagagggcgactcgctcccc	Protospacer
. *******************************

66. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP015374 (Pandoraea pnomenusa strain MCB032 plasmid unnamed 3, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacccctgacgacagagggcgactcgctccct	Protospacer
. *******************************

67. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NC_016053 (Xanthomonas arboricola pv. pruni str. CFBP 5530 plasmid pXap41, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacccctgacgacagagggcgactcgctccct	Protospacer
. *******************************

68. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_LR594694 (Variovorax sp. WDL1 plasmid 6) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacccctgacgacagagggcgactcgctccct	Protospacer
. *******************************

69. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP021899 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0050 plasmid unitig_4_pilon, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacccctgacgacagagggcgactcgctcccc	Protospacer
. *******************************

70. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP033195 (Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccct	Protospacer
* *****.*************************

71. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP022994 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccct	Protospacer
* *****.*************************

72. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP022994 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccct	Protospacer
* *****.*************************

73. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP022994 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccct	Protospacer
* *****.*************************

74. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP022994 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccct	Protospacer
* *****.*************************

75. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP026110 (Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccct	Protospacer
* *****.*************************

76. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP026110 (Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccct	Protospacer
* *****.*************************

77. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to CP000620 (Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccct	Protospacer
* *****.*************************

78. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to CP000620 (Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccct	Protospacer
* *****.*************************

79. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to CP000620 (Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccct	Protospacer
* *****.*************************

80. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to CP000620 (Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccct	Protospacer
* *****.*************************

81. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to CP000620 (Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccct	Protospacer
* *****.*************************

82. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP033202 (Xanthomonas oryzae pv. oryzae strain BXO1 plasmid pBXO1-1, complete sequence) position: , mismatch: 3, identity: 0.912

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctccct	Protospacer
* *****.*************************

83. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP021139 (Sulfuriferula sp. AH1 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcacccctgacgacagatggcgaatcgctccc	Protospacer
. **************** ***** ********

84. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NC_022540 (Xanthomonas citri pv. fuscans plasmid plb, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

85. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to LS423453 (Candidatus Nitrotoga sp. KNB genome assembly, plasmid: _1) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tacacccctgacgacagagggcgactcgtcccc	Protospacer
. **************************..***

86. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to LC155906 (Achromobacter xylosoxidans plasmid pKUN4507_1 DNA, complete sequence, strain: KUN4507) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcatcccagacgacagagggcgactcgctccc	Protospacer
. **.*** ************************

87. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP011166 (Xanthomonas citri pv. aurantifolii strain FDC 1609 plasmid pXfc46, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

88. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP021007 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pC, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

89. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP021007 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pC, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

90. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP021009 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pB, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

91. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP020994 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pC, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

92. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP020994 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pC, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

93. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP020995 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pB, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

94. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP020995 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pB, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

95. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP021020 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pC, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

96. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP012056 (Xanthomonas citri pv. fuscans strain ISO12C3 plasmid pXff45, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

97. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP012054 (Xanthomonas citri pv. fuscans strain ISO118C1 plasmid pXff45, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

98. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP021003 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pC, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

99. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP021005 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pB, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

100. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP012052 (Xanthomonas citri pv. fuscans strain ISO118C5 plasmid pXff45, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

101. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to CP021014 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP7767 plasmid pC, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

102. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NC_022542 (Xanthomonas citri pv. fuscans plasmid plc, complete sequence) position: , mismatch: 4, identity: 0.879

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
tgcccctctgacgacagagggcgactcgctccc	Protospacer
. * **.**************************

103. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP033195 (Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcctt	Protospacer
* *****.************************.

104. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP033195 (Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgcgccct	Protospacer
* *****.********************* ***

105. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP033195 (Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgcgccct	Protospacer
* *****.********************* ***

106. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP022994 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcctt	Protospacer
* *****.************************.

107. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP022994 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcctt	Protospacer
* *****.************************.

108. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP022994 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcctt	Protospacer
* *****.************************.

109. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP041964 (Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacctctgacgacagagggcgactcgctcccc	Protospacer
. ****.**************************

110. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP041964 (Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacctctgacgacagagggcgactcgctcccc	Protospacer
. ****.**************************

111. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP041782 (Xanthomonas citri pv. glycines strain 8ra plasmid unnamed1) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacctctgacgacagagggcgactcgctcccc	Protospacer
. ****.**************************

112. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP041782 (Xanthomonas citri pv. glycines strain 8ra plasmid unnamed1) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacctctgacgacagagggcgactcgctcccc	Protospacer
. ****.**************************

113. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP041782 (Xanthomonas citri pv. glycines strain 8ra plasmid unnamed1) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacctctgacgacagagggcgactcgctcccc	Protospacer
. ****.**************************

114. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP026335 (Xanthomonas citri pv. glycines strain EB08 plasmid pXAG27.EB08, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacctctgacgacagagggcgactcgctcccc	Protospacer
. ****.**************************

115. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NC_010872 (Xanthomonas axonopodis pv. glycines strain AG1 plasmid pAG1, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacctctgacgacagagggcgactcgctcccc	Protospacer
. ****.**************************

116. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NC_010876 (Xanthomonas axonopodis pv. glycines strain 8ra plasmid pXAG81, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacctctgacgacagagggcgactcgctcccc	Protospacer
. ****.**************************

117. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP017189 (Xanthomonas citri pv. glycines str. 8ra plasmid pXAG27.8ra, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacctctgacgacagagggcgactcgctcccc	Protospacer
. ****.**************************

118. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP015973 (Xanthomonas citri pv. glycines str. 12-2 plasmid pXAG27.12-2, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacctctgacgacagagggcgactcgctcccc	Protospacer
. ****.**************************

119. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP018464 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacccttgacgacagagggcgactcgctccct	Protospacer
. *****.*************************

120. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP018464 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacccttgacgacagagggcgactcgctccct	Protospacer
. *****.*************************

121. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP018464 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacccttgacgacagagggcgactcgctccct	Protospacer
. *****.*************************

122. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP018464 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacccttgacgacagagggcgactcgctccct	Protospacer
. *****.*************************

123. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP018464 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcaccctcgacgacagagggcgactcgctccct	Protospacer
* *****..************************

124. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP026110 (Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcctt	Protospacer
* *****.************************.

125. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP026110 (Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcctt	Protospacer
* *****.************************.

126. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP026110 (Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcctt	Protospacer
* *****.************************.

127. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP026110 (Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcctt	Protospacer
* *****.************************.

128. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP026110 (Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcctt	Protospacer
* *****.************************.

129. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP041962 (Xanthomonas citri pv. glycines strain 1018 plasmid unnamed1) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacctctgacgacagagggcgactcgctcccc	Protospacer
. ****.**************************

130. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP041962 (Xanthomonas citri pv. glycines strain 1018 plasmid unnamed1) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacctctgacgacagagggcgactcgctcccc	Protospacer
. ****.**************************

131. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP041966 (Xanthomonas citri pv. glycines strain K2 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacctctgacgacagagggcgactcgctcccc	Protospacer
. ****.**************************

132. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to CP000620 (Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcctt	Protospacer
* *****.************************.

133. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP033202 (Xanthomonas oryzae pv. oryzae strain BXO1 plasmid pBXO1-1, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgctcctt	Protospacer
* *****.************************.

134. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP033202 (Xanthomonas oryzae pv. oryzae strain BXO1 plasmid pBXO1-1, complete sequence) position: , mismatch: 4, identity: 0.882

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
cgcacccttgacgacagagggcgactcgcgccct	Protospacer
* *****.********************* ***

135. spacer 2.9|1473928|33|NC_016625|PILER-CR,CRT matches to NZ_CP016441 (Bordetella pseudohinzii strain HI4681 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.848

cccacccctgacgacagagggcgactcgctccc	CRISPR spacer
taccttcctgacgacagagggcgactcgctccc	Protospacer
. * ..***************************

136. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to LC155906 (Achromobacter xylosoxidans plasmid pKUN4507_1 DNA, complete sequence, strain: KUN4507) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcatcccagacgacagagggcgactcgctcccc	Protospacer
. **.*** ************************

137. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP021007 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pC, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

138. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP021007 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pC, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

139. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP021009 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pB, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

140. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP020994 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pC, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

141. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP020994 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pC, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

142. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP021020 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pC, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

143. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP021139 (Sulfuriferula sp. AH1 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcacccctgacgacagatggcgaatcgctcccc	Protospacer
. **************** ***** ********

144. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NC_022540 (Xanthomonas citri pv. fuscans plasmid plb, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

145. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to LS423453 (Candidatus Nitrotoga sp. KNB genome assembly, plasmid: _1) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tacacccctgacgacagagggcgactcgtccccc	Protospacer
. **************************..***

146. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP011166 (Xanthomonas citri pv. aurantifolii strain FDC 1609 plasmid pXfc46, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

147. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP020995 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pB, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

148. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP020995 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pB, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

149. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP012056 (Xanthomonas citri pv. fuscans strain ISO12C3 plasmid pXff45, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

150. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP012054 (Xanthomonas citri pv. fuscans strain ISO118C1 plasmid pXff45, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

151. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP021003 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pC, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

152. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP021005 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pB, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

153. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP012052 (Xanthomonas citri pv. fuscans strain ISO118C5 plasmid pXff45, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

154. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to CP021014 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP7767 plasmid pC, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

155. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NC_022542 (Xanthomonas citri pv. fuscans plasmid plc, complete sequence) position: , mismatch: 5, identity: 0.853

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
tgcccctctgacgacagagggcgactcgctcccc	Protospacer
. * **.**************************

156. spacer 2.18|1473928|34|NC_016625|CRISPRCasFinder matches to NZ_CP016441 (Bordetella pseudohinzii strain HI4681 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

cccacccctgacgacagagggcgactcgctcccg	CRISPR spacer
taccttcctgacgacagagggcgactcgctccct	Protospacer
. * ..***************************

157. spacer 1.2|1473098|34|NC_016625|CRISPRCasFinder matches to NZ_CP024895 (Amycolatopsis sp. AA4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

ttgcagc----gcgtgagccgttcgtcgatctcggtgg	CRISPR spacer
----agcacgggcgagagcagttcgtcgatctcggcga	Protospacer
    ***    *** **** ***************.*.

158. spacer 1.4|1473220|34|NC_016625|CRISPRCasFinder matches to NZ_CP045294 (Paenibacillus guangzhouensis strain KCTC 33171 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcacaaaagtcgccgcgccggccatcatcggag	CRISPR spacer
agcgccgagatcgtcgcaccggccatcatcggag	Protospacer
.**.* .*..***.***.****************

159. spacer 1.5|1473281|34|NC_016625|CRISPRCasFinder matches to NZ_LR536452 (Methylocella tundrae isolate MTUNDRAET4 annotated genome plasmid 3) position: , mismatch: 8, identity: 0.765

cgccgctgccgccgcttttgtcgaggccctgcgg	CRISPR spacer
gcccgccgccgccgcctttgtcgagggattgggg	Protospacer
  ****.********.**********  .** **

160. spacer 2.4|1473623|33|NC_016625|PILER-CR,CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 8, identity: 0.758

tcgtcgatccgatccagtttcacgcagtagtat	CRISPR spacer
atgtcgatccgatccagtttcatggagttagct	Protospacer
 .********************.* *** .  *

161. spacer 2.4|1473623|33|NC_016625|PILER-CR,CRT matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 8, identity: 0.758

tcgtcgatccgatccagtttcacgcagtagtat	CRISPR spacer
atgtcgatccgatccagtttcatgaagttagct	Protospacer
 .********************.* *** .  *

162. spacer 2.6|1473745|33|NC_016625|PILER-CR,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.727

cgccgggcgtcgttcagtacgaggagggtccgg	CRISPR spacer
ggccggtcgtcgttcaggacgaggatgccatcg	Protospacer
 ***** ********** ******* * . . *

163. spacer 2.6|1473745|33|NC_016625|PILER-CR,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 9, identity: 0.727

cgccgggcgtcgttcagtacgaggagggtccgg	CRISPR spacer
ggccggtcgtcgttcaggacgaggatgccatcg	Protospacer
 ***** ********** ******* * . . *

164. spacer 2.6|1473745|33|NC_016625|PILER-CR,CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 9, identity: 0.727

cgccgggcgtcgttcagtacgaggagggtccgg	CRISPR spacer
ggccggtcgtcgttcaggacgaggatgccatcg	Protospacer
 ***** ********** ******* * . . *

165. spacer 2.13|1473623|34|NC_016625|CRISPRCasFinder matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 9, identity: 0.735

tcgtcgatccgatccagtttcacgcagtagtatg	CRISPR spacer
atgtcgatccgatccagtttcatgaagttagctt	Protospacer
 .********************.* *** .  *

166. spacer 2.13|1473623|34|NC_016625|CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 9, identity: 0.735

tcgtcgatccgatccagtttcacgcagtagtatg	CRISPR spacer
atgtcgatccgatccagtttcatggagttagctt	Protospacer
 .********************.* *** .  *

167. spacer 1.2|1473098|34|NC_016625|CRISPRCasFinder matches to NZ_CP009293 (Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence) position: , mismatch: 10, identity: 0.706

ttgcagcgcgtgagccgttcgtcgatctcggtgg	CRISPR spacer
ccgtgcagcgtgagccgttcgacgacctcggtct	Protospacer
..*..  ************** ***.******

168. spacer 2.5|1473684|33|NC_016625|PILER-CR,CRT matches to NZ_CP007516 (Rubrobacter radiotolerans strain RSPS-4 plasmid 2, complete sequence) position: , mismatch: 10, identity: 0.697

acagatttcggcccttacacgctgcgcctcgac	CRISPR spacer
gagcccctcgacccgtacacgctgcgcctcgtc	Protospacer
. .  ..***.*** **************** *

169. spacer 2.15|1473745|34|NC_016625|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 10, identity: 0.706

cgccgggcgtcgttcagtacgaggagggtccggg	CRISPR spacer
ggccggtcgtcgttcaggacgaggatgccatcga	Protospacer
 ***** ********** ******* * . . *.

170. spacer 2.15|1473745|34|NC_016625|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 10, identity: 0.706

cgccgggcgtcgttcagtacgaggagggtccggg	CRISPR spacer
ggccggtcgtcgttcaggacgaggatgccatcga	Protospacer
 ***** ********** ******* * . . *.

171. spacer 2.15|1473745|34|NC_016625|CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 10, identity: 0.706

cgccgggcgtcgttcagtacgaggagggtccggg	CRISPR spacer
ggccggtcgtcgttcaggacgaggatgccatcga	Protospacer
 ***** ********** ******* * . . *.

172. spacer 2.14|1473684|34|NC_016625|CRISPRCasFinder matches to NZ_CP007516 (Rubrobacter radiotolerans strain RSPS-4 plasmid 2, complete sequence) position: , mismatch: 11, identity: 0.676

acagatttcggcccttacacgctgcgcctcgacg	CRISPR spacer
gagcccctcgacccgtacacgctgcgcctcgtcc	Protospacer
. .  ..***.*** **************** *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

35013 : 151581

110

Burkholderia_virus(28.57%)

portal,integrase,capsid,tail,protease,transposase,tRNA,head,terminase

attL 49661:49681|attR 77168:77188

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014250272.1\|35013_35880_+\|protease	proteasome-type protease	NA	NA	NA	NA
WP_014250273.1\|35887_36865_-	glycerophosphodiester phosphodiesterase	A0A2H4PGQ5	Escherichia_phage	7.9e-08	35.8
WP_014250274.1\|37073_38228_-	porin	NA	NA	NA	NA
WP_148276084.1\|40149_43218_+	formate dehydrogenase-N subunit alpha	NA	NA	NA	NA
WP_014250278.1\|43227_44172_+	formate dehydrogenase subunit beta	NA	NA	NA	NA
WP_014250279.1\|44158_44809_+	formate dehydrogenase subunit gamma	NA	NA	NA	NA
WP_014250280.1\|44821_45172_-	type II toxin-antitoxin system ChpB family toxin	NA	NA	NA	NA
WP_014250281.1\|45165_45417_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_014250282.1\|45617_46592_+	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA
WP_014250283.1\|46588_48025_+\|tRNA	L-seryl-tRNA(Sec) selenium transferase	NA	NA	NA	NA
WP_014250284.1\|48021_49929_+	selenocysteine-specific translation elongation factor	A0A1V0SDG4	Indivirus	7.6e-07	27.2
49661:49681	attL	NA	NA	NA	NA
WP_014250285.1\|49971_51975_+	LssY C-terminal domain-containing protein	NA	NA	NA	NA
WP_014250286.1\|52006_52642_+	DedA family protein	NA	NA	NA	NA
WP_041731387.1\|52883_53954_-\|integrase	tyrosine-type recombinase/integrase	C8CLF4	Xylella_phage	3.7e-83	47.9
WP_014250288.1\|53957_54194_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_081478182.1\|54306_54537_+	hypothetical protein	NA	NA	NA	NA
WP_148276085.1\|54541_54766_+	hypothetical protein	NA	NA	NA	NA
WP_041731391.1\|54847_55108_+	hypothetical protein	NA	NA	NA	NA
WP_014250289.1\|55402_55543_-	hypothetical protein	A9YX21	Burkholderia_phage	2.6e-10	89.2
WP_041731397.1\|56353_56635_-	hypothetical protein	A9YWU1	Burkholderia_phage	1.6e-30	67.8
WP_148276086.1\|56745_56967_+	hypothetical protein	NA	NA	NA	NA
WP_041731401.1\|57001_57253_+	hypothetical protein	NA	NA	NA	NA
WP_148276087.1\|57781_58078_+	hypothetical protein	NA	NA	NA	NA
WP_014250291.1\|58163_58997_-	YfdQ family protein	C5IHK3	Burkholderia_virus	1.6e-41	38.5
WP_014250292.1\|59041_59383_-	hypothetical protein	C5IHK2	Burkholderia_virus	1.2e-08	37.0
WP_175582493.1\|59551_59689_-	hypothetical protein	NA	NA	NA	NA
WP_175582494.1\|59834_59999_-	hypothetical protein	NA	NA	NA	NA
WP_050878388.1\|60198_60990_-	hypothetical protein	Q8W6S3	Burkholderia_virus	9.8e-17	30.6
WP_041731409.1\|61135_61387_-	hypothetical protein	NA	NA	NA	NA
WP_041731411.1\|61483_62005_-	hypothetical protein	NA	NA	NA	NA
WP_014250294.1\|62001_62433_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_148276088.1\|62419_62836_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_014250296.1\|62952_63645_-	BRCT domain-containing protein	A0A0U4J8W4	Pseudomonas_phage	1.4e-38	42.1
WP_148276089.1\|63619_63934_-	hypothetical protein	NA	NA	NA	NA
WP_081478185.1\|64089_65073_-	helix-turn-helix transcriptional regulator	B6SCU0	Bacteriophage	6.2e-29	49.2
WP_041732057.1\|65071_65308_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_175582495.1\|65304_65478_+	hypothetical protein	NA	NA	NA	NA
WP_014250298.1\|65641_66235_+	hypothetical protein	A0A0S2SYA8	Pseudomonas_phage	8.4e-21	35.8
WP_175582496.1\|66231_66426_+	hypothetical protein	NA	NA	NA	NA
WP_041731418.1\|66434_67133_+	phage antirepressor KilAC domain-containing protein	K4IBS6	Acinetobacter_phage	3.9e-41	47.9
WP_014250300.1\|67140_68226_+	helix-turn-helix domain-containing protein	A4JX55	Burkholderia_virus	7.5e-52	57.7
WP_041731420.1\|68222_68483_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_014250301.1\|68482_69055_+	hypothetical protein	Q3HQZ9	Burkholderia_phage	1.2e-59	63.0
WP_014250302.1\|69054_69462_+	hypothetical protein	NA	NA	NA	NA
WP_014250303.1\|69458_69827_+	DUF4406 domain-containing protein	H2BD42	Pseudomonas_phage	4.4e-28	54.8
WP_081478235.1\|69859_70414_+	DUF1364 family protein	Q6JIF7	Burkholderia_virus	2.0e-37	64.8
WP_014250305.1\|70677_70923_+	hypothetical protein	A0A172PZW7	Pseudomonas_phage	4.1e-06	46.6
WP_014250306.1\|70919_71270_+	DUF2591 family protein	NA	NA	NA	NA
WP_081478187.1\|71266_71857_+	hypothetical protein	NA	NA	NA	NA
WP_041731422.1\|71962_72160_-	hypothetical protein	NA	NA	NA	NA
WP_014250308.1\|72215_72608_+	hypothetical protein	B5WZZ4	Pseudomonas_phage	2.8e-25	48.4
WP_041731424.1\|72712_73255_+\|terminase	terminase small subunit	Q3HQS6	Burkholderia_phage	2.2e-36	51.8
WP_014250310.1\|73257_74931_+\|terminase	terminase large subunit	S4TSQ6	Salmonella_phage	1.1e-232	72.1
WP_014250311.1\|74927_76220_+\|portal	phage portal protein	Q6JIM9	Burkholderia_virus	5.4e-206	82.3
WP_014250312.1\|76216_76915_+\|head,protease	HK97 family phage prohead protease	Q6JIM8	Burkholderia_virus	1.3e-97	78.8
WP_014250313.1\|76923_78159_+\|capsid	phage major capsid protein	Q6JIM7	Burkholderia_virus	5.7e-104	50.5
77168:77188	attR	NA	NA	NA	NA
WP_041731427.1\|78217_78415_+	hypothetical protein	NA	NA	NA	NA
WP_014250314.1\|78415_78778_+\|head,tail	phage gp6-like head-tail connector protein	Q6JIM5	Burkholderia_virus	8.7e-37	66.7
WP_041731429.1\|78774_79107_+\|head	phage head closure protein	A0A1J0GUY4	Halomonas_phage	4.7e-13	41.8
WP_014250316.1\|79099_79453_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_014250317.1\|79456_79891_+	hypothetical protein	NA	NA	NA	NA
WP_014250318.1\|79894_80281_+	hypothetical protein	NA	NA	NA	NA
WP_014250319.1\|80283_80601_+	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_014250320.1\|80641_81019_+	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_014250321.1\|81011_83960_+\|tail	phage tail tape measure protein	Q3HQT9	Burkholderia_phage	3.9e-34	31.4
WP_014250322.1\|83959_84301_+\|tail	phage tail protein	C7BGC9	Burkholderia_phage	5.5e-33	64.6
WP_014250323.1\|85245_85923_+\|tail	phage minor tail protein L	Q6JIL5	Burkholderia_virus	1.4e-96	73.8
WP_014250324.1\|85922_86678_+	C40 family peptidase	A4JX14	Burkholderia_virus	4.7e-101	67.3
WP_014250325.1\|86670_87234_+\|tail	tail assembly protein	C7BGD3	Burkholderia_phage	1.1e-70	73.8
WP_014250326.1\|87230_90581_+	host specificity protein J	A4JX16	Burkholderia_virus	0.0e+00	63.6
WP_014250327.1\|90580_90901_+	hypothetical protein	NA	NA	NA	NA
WP_014250328.1\|90900_91659_+	hypothetical protein	Q3HQU7	Burkholderia_phage	1.5e-09	29.0
WP_014250329.1\|91666_91978_+	hypothetical protein	NA	NA	NA	NA
WP_148276091.1\|92059_92392_+	hypothetical protein	NA	NA	NA	NA
WP_148276092.1\|92501_92918_+	hypothetical protein	NA	NA	NA	NA
WP_175582446.1\|93203_94014_+\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	3.1e-18	31.2
WP_014250332.1\|94124_94364_+	hypothetical protein	NA	NA	NA	NA
WP_148276093.1\|94602_94887_+	hypothetical protein	NA	NA	NA	NA
WP_014250334.1\|94873_95377_+	hypothetical protein	I6NSS1	Burkholderia_phage	4.1e-45	58.6
WP_014250335.1\|95373_95685_+	hypothetical protein	NA	NA	NA	NA
WP_014250336.1\|95687_95906_+	hypothetical protein	A0A0S0N218	Pseudomonas_phage	1.9e-07	46.4
WP_148276094.1\|95952_96255_-	hypothetical protein	NA	NA	NA	NA
WP_041731441.1\|96893_97079_-	hypothetical protein	NA	NA	NA	NA
WP_175582497.1\|97620_98772_-	TniQ family protein	NA	NA	NA	NA
WP_050878498.1\|98848_99124_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_014250338.1\|99249_99897_+	hypothetical protein	NA	NA	NA	NA
WP_148276156.1\|101351_101720_+	GreA/GreB family elongation factor	NA	NA	NA	NA
WP_014250340.1\|102319_104242_+\|protease	ATP-dependent zinc metalloprotease FtsH	M4QMW8	Micromonas_pusilla_virus	7.2e-114	42.1
WP_148276095.1\|104366_104615_-	hypothetical protein	NA	NA	NA	NA
WP_050878395.1\|105042_107109_+	PAS domain-containing hybrid sensor histidine kinase/response regulator	A0A1B0VMK3	Pseudomonas_phage	7.7e-13	27.7
WP_175582498.1\|107365_111826_-	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	1.1e-99	25.5
WP_175582499.1\|111812_124010_-	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	5.7e-156	27.5
WP_050878401.1\|125696_125924_+	hypothetical protein	NA	NA	NA	NA
WP_041731447.1\|126396_126738_-	transcription initiation protein	NA	NA	NA	NA
WP_014250347.1\|128444_128921_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_014250348.1\|129429_129699_-\|tail	tail fiber protein	NA	NA	NA	NA
WP_041731456.1\|130193_132035_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	2.2e-59	33.1
WP_014250350.1\|132521_134465_-	AAA family ATPase	A0A2K9R7H3	Dishui_lake_phycodnavirus	1.8e-59	34.3
WP_081478191.1\|135042_135297_+	hypothetical protein	NA	NA	NA	NA
WP_014250353.1\|136053_136929_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014250354.1\|137049_138066_+	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA
WP_014250355.1\|138095_139457_+	MFS transporter	NA	NA	NA	NA
WP_014250356.1\|139471_140347_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_014250357.1\|140591_141029_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_041732082.1\|141089_142556_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_014250359.1\|142587_143781_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_014250360.1\|143842_145396_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_014250361.1\|146428_146770_-	BON domain-containing protein	NA	NA	NA	NA
WP_041731460.1\|149231_149678_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_041731462.1\|150000_151581_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	3.7e-124	48.5

DBSCAN-SWA_2

541946 : 548743

Pseudomonas_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_148276114.1\|541946_542348_-	hypothetical protein	A0A2H4J0K7	uncultured_Caudovirales_phage	2.8e-28	51.2
WP_014250697.1\|542397_542985_-	hypothetical protein	NA	NA	NA	NA
WP_014250698.1\|542985_543237_-	hypothetical protein	NA	NA	NA	NA
WP_014250699.1\|543238_544288_-	recombinase RecT	Q858E1	Salmonella_phage	4.0e-58	45.4
WP_041731613.1\|544290_544767_-	HNH endonuclease	C4ML56	Xanthomonas_virus	1.1e-28	44.9
WP_041731615.1\|544766_545606_-	PD-(D/E)XK nuclease-like domain-containing protein	G8CLD3	Synechococcus_phage	5.1e-40	38.8
WP_014250702.1\|545602_546013_-	hypothetical protein	NA	NA	NA	NA
WP_175582505.1\|546009_546186_-	hypothetical protein	NA	NA	NA	NA
WP_041731617.1\|546271_546463_-	hypothetical protein	NA	NA	NA	NA
WP_041731619.1\|546465_546651_-	hypothetical protein	NA	NA	NA	NA
WP_041731621.1\|546887_547091_-	hypothetical protein	NA	NA	NA	NA
WP_014250703.1\|547377_547683_-	hypothetical protein	NA	NA	NA	NA
WP_014250704.1\|547679_548414_-	LexA family transcriptional regulator	W6MVG5	Pseudomonas_phage	1.0e-07	54.8
WP_014250705.1\|548524_548743_+	helix-turn-helix domain-containing protein	A0A0H5AUC6	Pseudomonas_phage	3.0e-16	65.3

DBSCAN-SWA_3

562323 : 575615

Burkholderia_virus(44.44%)

terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014250721.1\|562323_564480_+	hypothetical protein	Q6J1R2	Burkholderia_virus	9.8e-128	44.1
WP_014250722.1\|564482_566414_+	transglycosylase SLT domain-containing protein	Q6J1R1	Burkholderia_virus	6.3e-158	62.0
WP_014250723.1\|566414_569012_+	hypothetical protein	Q6J1R0	Burkholderia_virus	0.0e+00	73.5
WP_014250724.1\|569011_569392_+	hypothetical protein	A0A2H4J7H0	uncultured_Caudovirales_phage	1.5e-15	44.6
WP_014250725.1\|569378_571034_+\|terminase	phage terminase large subunit	A0A2H4JCA3	uncultured_Caudovirales_phage	9.2e-150	50.5
WP_014250726.1\|571093_573190_+	right-handed parallel beta-helix repeat-containing protein	Q6J1Q9	Burkholderia_virus	4.9e-31	30.3
WP_148276119.1\|573231_573606_+	hypothetical protein	NA	NA	NA	NA
WP_175582525.1\|573620_573767_+	DUF3309 family protein	NA	NA	NA	NA
WP_014250728.1\|573763_574189_+	glycoside hydrolase family protein	A0A1Q1PW74	Pseudoalteromonas_phage	1.2e-24	46.6
WP_148276120.1\|574188_574773_+	hypothetical protein	A0A2I7S3K6	Vibrio_phage	1.7e-05	26.2
WP_014250730.1\|574769_575615_+	hypothetical protein	A0A219MHL0	Dickeya_phage	9.2e-13	34.1

DBSCAN-SWA_4

1443809 : 1497522

Tupanvirus(66.67%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014251484.1\|1443809_1444763_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014251485.1\|1445002_1445980_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_014251486.1\|1445976_1447137_-	porin	NA	NA	NA	NA
WP_041731963.1\|1447506_1448823_+	hypothetical protein	NA	NA	NA	NA
WP_014251488.1\|1448829_1449780_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014251489.1\|1449823_1451359_-\|holin	choline-sulfatase	A0A2K9L727	Tupanvirus	1.1e-24	25.9
WP_014251490.1\|1451466_1452378_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014251491.1\|1452496_1453372_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_014251492.1\|1454045_1454900_-	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_041731964.1\|1455018_1456251_-	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_014251494.1\|1456274_1457573_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_014251495.1\|1457669_1458428_-	drug:proton antiporter	NA	NA	NA	NA
WP_014251496.1\|1458424_1459588_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_014251497.1\|1459592_1461509_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_014251498.1\|1461523_1463587_-	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_014251499.1\|1463616_1464147_-	4-vinyl reductase	NA	NA	NA	NA
WP_014251500.1\|1464183_1465155_-	dipeptidase	NA	NA	NA	NA
WP_014251501.1\|1465593_1466592_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_014251502.1\|1467210_1467741_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014251503.1\|1467779_1468976_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	5.5e-11	26.2
WP_014251504.1\|1469191_1469779_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_014251505.1\|1469807_1471277_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_014251506.1\|1471288_1472992_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	4.2e-49	29.1
WP_014251507.1\|1474079_1474382_-	type I-E CRISPR-associated endoribonuclease Cas2	NA	NA	NA	NA
WP_014251508.1\|1474353_1475241_-	type I-E CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_014251509.1\|1475257_1476001_-	type I-E CRISPR-associated protein Cas6/Cse3/CasE	NA	NA	NA	NA
WP_014251510.1\|1475997_1476738_-	type I-E CRISPR-associated protein Cas5/CasD	NA	NA	NA	NA
WP_014251511.1\|1476739_1477921_-	type I-E CRISPR-associated protein Cas7/Cse4/CasC	NA	NA	NA	NA
WP_014251512.1\|1477971_1478550_-	type I-E CRISPR-associated protein Cse2/CasB	NA	NA	NA	NA
WP_014251513.1\|1478536_1480153_-	type I-E CRISPR-associated protein Cse1/CasA	NA	NA	NA	NA
WP_014251514.1\|1480149_1482759_-	CRISPR-associated helicase/endonuclease Cas3	NA	NA	NA	NA
WP_014251515.1\|1482943_1484362_-	MFS transporter	NA	NA	NA	NA
WP_014251516.1\|1484470_1484734_-	hypothetical protein	NA	NA	NA	NA
WP_014251517.1\|1484730_1485168_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_014251518.1\|1485164_1485827_-	sarcosine oxidase subunit gamma	NA	NA	NA	NA
WP_014251519.1\|1485816_1488819_-	sarcosine oxidase subunit alpha family protein	NA	NA	NA	NA
WP_014251520.1\|1488815_1489115_-	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_014251521.1\|1489139_1490384_-	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA
WP_014251522.1\|1490427_1491822_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_014251523.1\|1492185_1492500_+	hypothetical protein	NA	NA	NA	NA
WP_014251524.1\|1492636_1493728_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_014251525.1\|1493779_1494547_+	class II aldolase/adducin family protein	NA	NA	NA	NA
WP_041731969.1\|1494570_1495518_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014251527.1\|1495613_1496606_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_014251528.1\|1496619_1497522_-\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NC_016590

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_016590_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_016590_1

1270792-1270864

Orphan

Consensus_repeat	Method
CGCAGTGTCCGAATTCGGACACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_016590_1

>merge|NC_016590|1|1270792-1270864|CRISPRCasFinder
CGCAGTGTCCGAATTCGGACACCTCCCGTGTACACCCCGACTCATCATCTCGGAGTGTCCGAATTCGGACACC

>NC_016590|1|1|1270792-1270864|CRISPRCasFinder
CGCAGTGTCCGAATTCGGACACC	TCCCGTGTACACCCCGACTCATCATCT
CGGAGTGTCCGAATTCGGACACC

Protein	Signature genes	Signature genes Name	Protein_function
NC_016590.1\|WP_014193865.1\|1263662_1264628_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NC_016590.1\|WP_014193874.1\|1273753_1275160_+\|replication-initiation-protein	unknown	unknown	gnl\|CDD\|376444
NC_016590.1\|WP_148276220.1\|1266736_1267108_-\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|163586
NC_016590.1\|WP_175582541.1\|1281127_1282573_+\|hypothetical-protein	unknown	unknown	unknown
NC_016590.1\|WP_014193877.1\|1276865_1278977_+\|phospholipase-C,-phosphocholine-specific	unknown	unknown	gnl\|CDD\|274561
NC_016590.1\|WP_050878585.1\|1262794_1263649_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NC_016590.1\|WP_148276222.1\|1276568_1276838_+\|hypothetical-protein	unknown	unknown	unknown
NC_016590.1\|WP_041732718.1\|1267925_1268171_-\|hypothetical-protein	unknown	unknown	unknown
NC_016590.1\|WP_041732724.1\|1282730_1283864_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340836
NC_016590.1\|WP_014193867.1\|1265649_1266696_-\|catalase	unknown	unknown	gnl\|CDD\|163708
NC_016590.1\|WP_175582550.1\|1275185_1276343_-\|YbfB/YjiJ-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340869
NC_016590.1\|WP_014193870.1\|1268446_1268914_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371662
NC_016590.1\|WP_148276221.1\|1267205_1267433_-\|hypothetical-protein	unknown	unknown	unknown
NC_016590.1\|WP_014193866.1\|1264634_1265555_-\|AEC-family-transporter	unknown	unknown	gnl\|CDD\|223751
NC_016590.1\|WP_014193871.1\|1268943_1269417_+\|hypothetical-protein	unknown	unknown	unknown
NC_016590.1\|WP_014193878.1\|1279319_1279766_+\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240025
NC_016590.1\|WP_148276258.1\|1261624_1262479_-\|transporter	unknown	unknown	gnl\|CDD\|379259
NC_016590.1\|WP_148276223.1\|1280480_1280861_-\|hypothetical-protein	unknown	unknown	unknown
NC_016590.1\|WP_014193873.1\|1271908_1273120_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|224113
NC_016590.1\|WP_014193872.1\|1270934_1271912_-\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|319251

Protein	Function_ID	Function_description	E-value
NC_016590.1\|WP_014193865.1\|1263662_1264628_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	8.60513e-64
NC_016590.1\|WP_014193874.1\|1273753_1275160_+\|replication-initiation-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	0.00213045
NC_016590.1\|WP_014193877.1\|1276865_1278977_+\|phospholipase-C,-phosphocholine-specific	gnl\|CDD\|274561	TIGR03396, PC_PLC, phospholipase C, phosphocholine-specific, Pseudomonas-type. Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream. [Cellular processes, Pathogenesis].	0
NC_016590.1\|WP_050878585.1\|1262794_1263649_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.78368e-17
NC_016590.1\|WP_041732724.1\|1282730_1283864_+\|glycosyltransferase	gnl\|CDD\|340836	cd03807, GT4_WbnK-like, Shigella dysenteriae WbnK and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.	2.09598e-120
NC_016590.1\|WP_014193867.1\|1265649_1266696_-\|catalase	gnl\|CDD\|163708	cd08152, y4iL_like, Catalase-like heme-binding proteins similar to the uncharacterized y4iL. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes involved in the protection of cells from the toxic effects of peroxides. It catalyses the conversion of hydrogen peroxide to water and molecular oxygen. Several other related protein families share the catalase fold and bind to heme, but do not necessarily have catalase activity. This family contains uncharacterized proteins similar to Rhizobium sp. NGR234 y4iL, of mostly bacterial origin.	3.10728e-39
NC_016590.1\|WP_175582550.1\|1275185_1276343_-\|YbfB/YjiJ-family-MFS-transporter	gnl\|CDD\|340869	cd06180, MFS_YjiJ, Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Escherichia coli YjiJ and other uncharacterized proteins. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.85166e-52
NC_016590.1\|WP_014193870.1\|1268446_1268914_+\|hypothetical-protein	gnl\|CDD\|371662	pfam11672, DUF3268, zinc-finger-containing domain. This is a family of bacterial and plasmid sequences that carry at least one zinc-finger towards the N-terminus and a possible second at the C-terminus.	3.68361e-23
NC_016590.1\|WP_014193866.1\|1264634_1265555_-\|AEC-family-transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	4.89484e-42
NC_016590.1\|WP_148276220.1\|1266736_1267108_-\|c-type-cytochrome	gnl\|CDD\|163586	TIGR03874, 4cys_cytochr, c-type cytochrome, methanol metabolism-related. This family represents a c-type cytochrome related to (but excluding) cytochrome c-555 of Methylococcus capsulatus. Members contain four invariant Cys residues, including two from a heme-binding motif shared with c-555, and two others.	1.17868e-05
NC_016590.1\|WP_014193878.1\|1279319_1279766_+\|NUDIX-domain-containing-protein	gnl\|CDD\|240025	cd04667, Nudix_Hydrolase_10, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	4.0307e-20
NC_016590.1\|WP_148276258.1\|1261624_1262479_-\|transporter	gnl\|CDD\|379259	pfam13557, Phenol_MetA_deg, Putative MetA-pathway of phenol degradation.	1.38763e-13
NC_016590.1\|WP_014193873.1\|1271908_1273120_-\|AAA-family-ATPase	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	1.89201e-38
NC_016590.1\|WP_014193872.1\|1270934_1271912_-\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|319251	cd16393, SPO0J_N, Thermus thermophilus stage 0 sporulation protein J-like N-terminal domain, ParB family member. Spo0J (stage 0 sporulation protein J) is a ParB family member, a critical component of the ParABS-type bacterial chromosome segregation system. The Spo0J N-terminal region acts in protein-protein interaction and is adjacent to the DNA-binding domain that binds to parS sites. Two Spo0J bind per parS site, and Spo0J interacts with neighbors via the N-terminal domain to form oligomers via an Arginine-rich patch (RRXR). This superfamily represents the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system. parABS contributes to the efficient segregation of chromosomes and low-copy number plasmids to daughter cells during prokaryotic cell division. The process includes the parA (Walker box) ATPase, the ParB DNA-binding protein and a parS cis-acting DNA sites. Binding of ParB to centromere-like parS sites is followed by non-specific binding to DNA ("spreading", which has been implicated in gene silencing in plasmid P1) and oligomerization of additional ParB molecules near the parS sites. It has been proposed that ParB-ParB cross-linking compacts the DNA, binds to parA via the N-terminal region, and leads to parA separating the ParB-parS complexes and the recruitment of the SMC (structural maintenance of chromosomes) complexes. The ParB N-terminal domain of Bacillus subtilis and other species contains a Arginine-rich ParB Box II with residues essential for bridging of the ParB-parS complexes. The arginine-rich ParB Box II consensus (I[VIL]AGERR[FYW]RA[AS] identified in several species is partially conserved with this family and related families. Mutations within the basic columns particularly debilitate spreading from the parS sites and impair SMC recruitment. The C-terminal domain contains a HTH DNA-binding motif and is the primary homo-dimerization domain, and binds to parS DNA sites. Additional homo-dimerization contacts are found along the N-terminal domain, but dimerization of the N-terminus may only occur after concentration at ParB-parS foci.	1.16587e-36

>NC_016590.1|WP_014193871.1|1268943_1269417_+|hypothetical-protein
MSRTLPFQRSPQATRSRLSKAQLLPIPRAVADELALAAHMSLTALRFGSSDIGPAQHITEAMYLAKFLSEAGHGDFSHEELLRADQSMAAVFDAGRASGSWMLPADDFDRLAAIVSLYDLQLRRASLGALSAASERLERFKAGEAYQPMQVGKSGRV
>NC_016590.1|WP_014193870.1|1268446_1268914_+|hypothetical-protein
MRVGRPVKPLPHPNCDYCGAPATLTRSGDEAYPYREDHGPLWMCADCQAWIGIFPRSTRNVPLGRLADARLRDLKVKLHAALEPLVQAKVRRDGCNVFEARSKGMKWLAQKIGVEPEKCSIHTLDADACERAIAVVEHFERERGSHPSDSAIDER
>NC_016590.1|WP_041732718.1|1267925_1268171_-|hypothetical-protein
MAMKITFLWAATAAAVFAMSAAQAQDTSMTPAQQSAASPTADSSYGGAMSATKASGASRDAWTSTSQLCTPGLSCNIYSGQ
>NC_016590.1|WP_148276221.1|1267205_1267433_-|hypothetical-protein
MARIAPTPAPLPSMSTEARSRSTCRRHRAERRVLLTSMTTAGVSTTATRASNRRKRASRPRRRSSSRKRRAASGR
>NC_016590.1|WP_148276220.1|1266736_1267108_-|c-type-cytochrome
MLLATAACVLGVLLATQAQAQAQTQAQTQPQTPEADAWRAIRAADCARCHGKDHEGLAAPSIVGFARTQSRERFIAAVLDGNPPMGMPAYRGDAPIESRIDAIYRYFVGRADGSIPAGAPGSK
>NC_016590.1|WP_014193867.1|1265649_1266696_-|catalase
MSFAQLRSEGTGWTDRLDDATTLAMLVTAIGEQQNKLASSRHTGLDGKVDRAQHQKQVLGAFGTLRIADDIPDAARFGPFANGPVAYRVACRISNGQPCPRSDMAADVRGIAIKLFTQDGAETDLLMTNEGGRSHARNSVQFMAVSDIIVALLAEGPVSGIAQSLREMMMAKLGPVEAARILAILFKETAAHRVVSTTTEDYWGSVVQLGAAAIKYSLHPHPSTPAGAQSARHGDDYLRDDLLSRLRQGPVKWRLGLQLFVDEATTPVNDASVAWKSEIVHVGELEIDAPPTADDEARINQLAFNPANGFEPLGITHAHKVVYAASAANRKGRGVLSSDEARALLGAH
>NC_016590.1|WP_014193866.1|1264634_1265555_-|AEC-family-transporter
MHLAGMILPIFAIILTGWLARVSGYMPHALAPSLMQFAYYVAMPALVFLTIADESLRSLLEWRFLAAFGGGSMICFALMLLGMRIGRGANLGASAMLAAAISMTNTGFVALPILKALYGKPGVLAAAVATVFVGAIMFPVLVVLLEIGRYDTSRKISVTALIRRIVTNPVILATLCGLLWSVGGLTLPAPFASFLTILGEALTPCALFAIGLDLTSGELRGRVSFYAILTILKLAIVPLVVYALCLAMRLGHEATVAAVVCAAVPTAKSAYVLAVEYDVEKNVVGAVISMTTLLSIVTLLAWLYLL
>NC_016590.1|WP_014193865.1|1263662_1264628_+|LysR-family-transcriptional-regulator
MDLFMSMEAFVRAAEAQSFASAARQLGVAKSVVTSRVKQLEEHFGVALFHRSTRAVRLSEVGESYYRDCLLLVSKVHELSGRVSAETQSLCGTLNVHVLPGFALGHFSQALIAFREAHPRIEFVVTVNDRVIDPVQEGFDLALQIYPPASNLLVERKLFPVRGVLCATPAYLKEEPAIETPLDLLRHDFARYAHYPWGDNWPLMKGNECYEIALNAVLKTNSVHLLLEFARAGAGVVYLPTMVAASDLLERRLVRVLPDYAAPPLWLSAVYPTSHRSTTKVKAFVDFLRERYLSEPQWDKALGISPPDDEERNVDEELGDV
>NC_016590.1|WP_050878585.1|1262794_1263649_+|helix-turn-helix-transcriptional-regulator
MSVQSVHTAAARIDRFSAVAGVPGLEYCISGPRPYSLELSNSSDMICLLLGTIVSDTRYDDGPAAPFTFRAETAAFHPRGESMRIDAHDVRHGFIAFRYADAFVNRIADRNAEPLRRAGSRSNLGADSIRHLVRYARQKAQAETRPVDPWEMQCVATLAWIETTRHLESSARERKSALTDAGFAMLEAYVAENIDQNLACADIAAELDLPVRVVFDGVKTRTGHSLYRYVLEKRIDAAARMLRAGDAPLVEVAVACGFSSQQHMTALFSERLGTTPLRYRKAAA
>NC_016590.1|WP_148276258.1|1261624_1262479_-|transporter
MTAHAAGIPFATDRPQTWQFSSDFEGTYDSFGQNLDWNHDSRAFDAHGNQVAGPGTNTFVGLSTFIHYWKLPSLPHVGFNASITVPEIRSQGSQFSASGIGDPLIGGLVWYNPAPATTLGAQAYVQVPIGQNDVSTNTWSFWPSVFYDDWYGHVNVDLLLGGIIRGRTLRSGHDDLSPGNSFHLNLRVGYSISPPDNPFAIPFVGLDFQTSGGTFNQTAAMPVANSASRETTVGVGVLFQFKPNSLPFVHQKMYDQLSIQYQHSVSGRNTTLTNGILVQAWHYW
>NC_016590.1|WP_014193872.1|1270934_1271912_-|ParB/RepB/Spo0J-family-partition-protein
MSNNIREQLMAKTANLPKPADFKGENKKDKTNRGPQTMPGITSALAAAQLRIQELEAKGVDTDISVDAIVPNPWQPRRQFSEAKLAELARSIGEVGLLQAVTVRRTGESYQLVAGERRWRAHKLINKPSVRAVVIDCTDQDMAALALMENVTRDDLSDYEIAIAIRRAEAEFPNRTRLAEAMGITRSDLYRFLAYDALPDFVKRDLDLNPSVLGASSAQDIANALKKTGEQGLKALQELWPQVLSGDLVQTKVAASLSAQASRGESTTDAGGRSILKIFAGKVQAGSITKDVKGLTFKFKAGVMTEEQENQLREHIGKMFSIQSE
>NC_016590.1|WP_014193873.1|1271908_1273120_-|AAA-family-ATPase
MANVGTLPMEDRKVTLREVAEFADNLEPFSDNLREQILAPRPRKLAPFYTISELAEMCNLTRQQIQYLVTKGEGGLPSGTLNGSGRSRTFTLPEVRMWVKMASDIFQTRLDDGDSTFRGKVLTTAQLKGGSAKTTTTVCLAQALTLLGRKVLLIDLDPQASASELCGLYAEKEISGDDTVLPYIYDQNVEGGLGASVQSTYWDGLDIIPGHTFLYGAEFLLPARQKTIQGYRFWAVLREGLEPLRSQYDYILIDTSPSLSYMNLNALLAADALVMPMIPENLDFISSLAFWRLFSDVAEDFLPYEEDKVYDFISILLSKVDYGKTSSAPVVRQWAQSAYGRWLDPFEIPASSVMSGGALSFSTALDVVSTHSTAKSLQRVRQPMMQYAKWLDDMFVKSWKESA
>NC_016590.1|WP_014193874.1|1273753_1275160_+|replication-initiation-protein
MENQDLTVTPQQLALDIYEDMSAQGSALCESTRDIGFLRNNIFTRVGGLGIAARRVLDAAYFIVATKSPEELIDDKVYTFTADINYFKWLMRYDSRNHSHLIAQMRAAARARVEIMTAPSIEELTEKDSWGTISLLGDCYIERNVVCILLAGRVIKYLISPYKAHWLSLRASTAFSLSLARAIYDRLIPCEGHGVTEWFAYDDVLEWPGKVGESRKEVKEFKKHFLGPAIDQLNEVSDFDVSWEPNAERVAPEKLKIRFRFTKKQGADAARAGIQDSMYLLLHNEFAFDTPDFERLAKRRDVWTDERLEQAIEYTRHKLNEGKVTVSPRGYLFKALEGNYRIGEADRKMASIKAKQLEDDKKVRRSRDTAQAHLEASIQVQNDTAKAKMSDEIRAGREFFESLDAAARKELCHSFVSQLIPQRLIEKQGLSRESLSADNILTVNRVVADAFCSHVFVKMKKARAGSPL
>NC_016590.1|WP_175582550.1|1275185_1276343_-|YbfB/YjiJ-family-MFS-transporter
MALSLGSAIALGLARFSYALLLPPMRLDLAWNFAQAGAMNTANAFGYLLGALAFSRLSTRVASRTLFVAGCVSTALLMAASGTTTDTDALLALRVATGVGSALIFVSGGVLAARLASMSPRDAGLVIGLYYGGTGWGIVISSMLVPVAALPVAHGWRFAWFALAAACAACSGIAVWAARRIEAAHPLAAARAGAGSGRGEPVRRRRFALALAGYGCFGIGYIGYMTFIVALLRNAGMSAAVVSGFYVLLGVATVVSARMWSGLLDRMRGGQALAILNALLAAATLIPAMAAHPLAAFVSGTLFGATFLSAVASTTAFVRHNLPPNEWPRGINAFTIVFAFGQIVGPVVIGKVSDSAGLTRGLVYSALMLAVGAVLAGWQKPLKAA
>NC_016590.1|WP_148276222.1|1276568_1276838_+|hypothetical-protein
MSIVSSRHAVVARIIVCACAIVCGCSKPESPSSDTPARSEPSALSATTATSELQDWAKQATDATDATAPPAMARAASEPLATPVIHTVD
>NC_016590.1|WP_014193877.1|1276865_1278977_+|phospholipase-C,-phosphocholine-specific
MKNKNRRDFLRAAVEAAGATAALNVMPLGISQALAIPANNRHGSIEDIEHIVVLMQENRSFDHYFGSLRGVRGFGDRSAVTLPSGKPVFHQPIATGAGEVLPFHPDASNLGLQFLQDLPHGWTDGQGAFHGGRYDQWVPFKGTTTMAYLQRDDIPFHYQLADAFTICDAYHCSTNTSTDPNRYYMWTGYVGNDGTGGGPVVDNAEAGYGWSTFPEVLERAGISWKIYQDIGTGLDAKNGWGWTDDAYIGNYGDNSLLYFTQYQNAQPGSPLYEKARRGTNAAAGDDYFAILKRDVASGALPQVSWIVAPEAFSEHPNWPANYGAWYVDQVLQVLTSNPELWSKTALLINYDENDGFFDHVVPPFPSTSNTNGLSTVDTSAEIFPGSAKYASGPYGLGARVPMLVVSPWSKGGWVCSETFDHTSVIRFIQKRFGRKHGLAEPNISPWRRAICGDLSSAFDFRNPNSTMPALPATSAYVPADKKRHPDYVPVPPVAQTTPKQEPGVRAARALPYQLFVRGRADASKDSVAFDFVNTGSAGAVFLLYRNASADAPRTYTVEAHKRLADRVAANQDGSFDFVVHGPNGFLRRIAGKAGAQHAWWSREQAAPDVAEGYDVANGNLQLRLENRGTAACTFSAVNAYDPSKTITRRVRGGDTAQVYLDLRDAHGWYDVEIKVDTDGAFLRRLAGHVETGRDSMSDPALGA
>NC_016590.1|WP_014193878.1|1279319_1279766_+|NUDIX-domain-containing-protein
MRERATVLLVRHQSVLLVRERGGPWLLPGGTVGYEELTIIAAIRALHEDTGVAASAAAFLFEQVSAHHLHHVFRIAIPDDVHPRPSAGGRLHELHWVEASQLPQVSATPGTRAILSRAMGGGRESSRPAWSHDGPGGDAAAGIGRRWR
>NC_016590.1|WP_148276223.1|1280480_1280861_-|hypothetical-protein
MFRNAAPCDERPSLVRLSARAAQKRKVLRTSVDRRFDAPAWMHGGSGRFVAMHHGFALAIPRRALMTGIALFICLILGERRKNNLDYRQQSQANYCEKNNCAYNTDHSHASSALTALYQAFDKTRR
>NC_016590.1|WP_175582541.1|1281127_1282573_+|hypothetical-protein
MAQSSFPSVLQWWTNFEKRLYGDSCDASRADAPASLVVLYDGYENVEALWKALLQCRTPHIQVVWKSPETGEMRLLAESHVAIPEKLFFLKSLQASHQRIDVLVARARRRLEAAGSPQVFPLVEGEARPAVLSGLTSAWFALRHLGRKVLNQPLKVLVQRGHWVLAYRRADTAADAPADNATDPNESRGWITLPGMPTQFHADPFLWRGKNGEYHLFFESLPYDTNRGTISHMAFDPATQSWQETPRIVLERNYHLSYPFLFEHEGEIFMIPETCGNRTIEMYRAASFPTEWVLHKVVMRDIVAADTTLHFDGKTWWMFTSVAEDGGPNWDELSIFHSDSPFGEWTAHPMNPVVSDVRLARMAGNLFTDAQNRLIRPAQNCEREYGAALAFREITELTPTTYAERTVAVRNPPRGHQGVHTWNSAGDFTIVDIKTQLRKWSPWRSLTKRARRAAAPAPDPRRQASQRVGRRTERATRAGIH
>NC_016590.1|WP_041732724.1|1282730_1283864_+|glycosyltransferase
MKLLHVIVALNADGAERMLQRLIESHIEDPRFRHVVCSLTTTGKVGEELAARGVDVRSLGMKSPLGFARALWRLVQLIREVRPDIIQTWMYHADFLGGLAGRLAAHKRIVWGVRTTDVRSGGSRVTVLLRKLCAWLSYSVPQAIVCAAEASRRAHVSVGYDASRMMVVPNGFDVARLCATPEQRLAIREQCGFDDRTIVVGILGRFHPVKDHESFVRAAGLIAARQPDVRFMMVGRDLDANNRELADWIAQTGFASRFVLLGERRDVPACLSAMDVFCLSSRTEGFPNVVGEAMAMALPCVVTDVGDAAMLVANTGVVVPKENADALAAGLSRVIDMKPDERLRLGQMARARIHAEFTMMRARERFEDIYLRLVQEK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_016590_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_016590_2

1313649-1313767

Orphan

Consensus_repeat	Method
TGATCGCGCGCGGACTGGGCCAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NC_016590_2

>merge|NC_016590|2|1313649-1313767|CRISPRCasFinder
TGCTCGCGTGCGGATTGCGCGACTTGATCCTTCACCGAAGCGACCACTTGATCGCGCGCGGACTGGGCCACTTGGTTCTGAACCGATTGCACGATCTGATCGCGCGCGGACTGAGCCAC

>NC_016590|2|2|1313649-1313767|CRISPRCasFinder
TGCTCGCGTGCGGATTGCGCGAC	TTGATCCTTCACCGAAGCGACCACT
TGATCGCGCGCGGACTGGGCCAC	TTGGTTCTGAACCGATTGCACGATC
TGATCGCGCGCGGACTGAGCCAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_016590.1\|WP_014193897.1\|1308546_1309074_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NC_016590.1\|WP_014193895.1\|1304777_1305998_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378826
NC_016590.1\|WP_014193909.1\|1321026_1322637_+\|L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143441
NC_016590.1\|WP_175582542.1\|1315344_1315509_+\|hypothetical-protein	unknown	unknown	unknown
NC_016590.1\|WP_014193906.1\|1317481_1318813_+\|epoxide-hydrolase	unknown	unknown	gnl\|CDD\|377658
NC_016590.1\|WP_050878586.1\|1310240_1311068_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl\|CDD\|227186
NC_016590.1\|WP_041732732.1\|1322662_1324129_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341030
NC_016590.1\|WP_014193900.1\|1311087_1312116_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370761
NC_016590.1\|WP_014193905.1\|1315811_1316543_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NC_016590.1\|WP_014193901.1\|1312193_1312514_-\|pyrimidine/purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|377724
NC_016590.1\|WP_041732731.1\|1319844_1320846_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NC_016590.1\|WP_014193898.1\|1309219_1310236_+\|1-aminocyclopropane-1-carboxylate-deaminase	unknown	unknown	gnl\|CDD\|183494
NC_016590.1\|WP_014193893.1\|1299789_1301733_+\|acyltransferase	unknown	unknown	gnl\|CDD\|224748
NC_016590.1\|WP_014193911.1\|1324375_1325179_+\|N-formylglutamate-deformylase	unknown	unknown	gnl\|CDD\|131072
NC_016590.1\|WP_014193894.1\|1302112_1303480_-\|polysaccharide-biosynthesis-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|240528
NC_016590.1\|WP_041732728.1\|1306084_1308463_-\|transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|227342
NC_016590.1\|WP_148276226.1\|1325476_1326172_+\|hypothetical-protein	unknown	unknown	unknown
NC_016590.1\|WP_014193907.1\|1318916_1319774_+\|N-formylglutamate-amidohydrolase	unknown	unknown	gnl\|CDD\|131072
NC_016590.1\|WP_014193904.1\|1314301_1315048_+\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|227278
NC_016590.1\|WP_085952674.1\|1312596_1313220_-\|septal-ring-lytic-transglycosylase-RlpA-family-protein	unknown	unknown	gnl\|CDD\|223868

Protein	Function_ID	Function_description	E-value
NC_016590.1\|WP_014193897.1\|1308546_1309074_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	2.47822e-46
NC_016590.1\|WP_014193895.1\|1304777_1305998_+\|hypothetical-protein	gnl\|CDD\|378826	pfam12200, DUF3597, Domain of unknown function (DUF3597). This family of proteins is found in bacteria, eukaryotes and viruses. Proteins in this family are typically between 126 and 281 amino acids in length. The function of this domain is unknown. The structure of this domain has been found to contain five helices with a long flexible loop between helices one and two.	2.72411e-05
NC_016590.1\|WP_014193909.1\|1321026_1322637_+\|L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|143441	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.	0
NC_016590.1\|WP_014193906.1\|1317481_1318813_+\|epoxide-hydrolase	gnl\|CDD\|377658	pfam06441, EHN, Epoxide hydrolase N-terminus. This family represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (EC:3.3.2.3) comprise a group of functionally related enzymes that catalyze the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarization of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites which arise during the biotransformation of foreign compounds. This family is often found in conjunction with pfam00561.	1.02415e-53
NC_016590.1\|WP_050878586.1\|1310240_1311068_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl\|CDD\|227186	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction only].	7.845e-41
NC_016590.1\|WP_041732732.1\|1322662_1324129_-\|MFS-transporter	gnl\|CDD\|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.17423e-87
NC_016590.1\|WP_014193900.1\|1311087_1312116_-\|hypothetical-protein	gnl\|CDD\|370761	pfam09952, AbiEi_2, Transcriptional regulator, AbiEi antitoxin, Type IV TA system. AbiEi_2 is the cognate antitoxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	3.39839e-34
NC_016590.1\|WP_014193905.1\|1315811_1316543_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	3.69462e-21
NC_016590.1\|WP_014193901.1\|1312193_1312514_-\|pyrimidine/purine-nucleoside-phosphorylase	gnl\|CDD\|377724	pfam06865, DUF1255, Protein of unknown function (DUF1255). This family consists of several conserved hypothetical bacterial proteins of around 95 residues in length. The function of this family is unknown.	7.83987e-55
NC_016590.1\|WP_041732731.1\|1319844_1320846_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.42962e-36
NC_016590.1\|WP_014193898.1\|1309219_1310236_+\|1-aminocyclopropane-1-carboxylate-deaminase	gnl\|CDD\|183494	PRK12390, PRK12390, 1-aminocyclopropane-1-carboxylate deaminase; Provisional.	0
NC_016590.1\|WP_014193893.1\|1299789_1301733_+\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	1.08907e-67
NC_016590.1\|WP_014193911.1\|1324375_1325179_+\|N-formylglutamate-deformylase	gnl\|CDD\|131072	TIGR02017, hutG_amidohyd, N-formylglutamate amidohydrolase. In some species, histidine is converted to via urocanate and then formimino-L-glutamate to glutamate in four steps, where the fourth step is conversion of N-formimino-L-glutamate to L-glutamate and formamide. In others, that pathway from formimino-L-glutamate may differ, with the next enzyme being formiminoglutamate hydrolase (HutF) yielding N-formyl-L-glutamate. This model represents the enzyme N-formylglutamate deformylase, also called N-formylglutamate amidohydrolase, which then produces glutamate. [Energy metabolism, Amino acids and amines].	2.00918e-123
NC_016590.1\|WP_014193894.1\|1302112_1303480_-\|polysaccharide-biosynthesis-C-terminal-domain-containing-protein	gnl\|CDD\|240528	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli MurJ (MviN) has been identified as essential for murein biosynthesis. It has been suggested that MurJ functions as the peptidoglycan lipid II flippase which is involved in translocation of lipid-anchored peptidoglycan precursors across the cytoplasmic membrane, though results obtained in Bacillus subtilis seem to indicate that its MurJ homologs are not essential for growth. Some MviN family members (e.g. in Mycobacterium tuberculosis) possess an extended C-terminal region that contains an intracellular pseudo-kinase domain and an extracellular domain resembling carbohydrate-binding proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	2.47845e-29
NC_016590.1\|WP_041732728.1\|1306084_1308463_-\|transglycosylase-domain-containing-protein	gnl\|CDD\|227342	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane].	2.02228e-166
NC_016590.1\|WP_014193907.1\|1318916_1319774_+\|N-formylglutamate-amidohydrolase	gnl\|CDD\|131072	TIGR02017, hutG_amidohyd, N-formylglutamate amidohydrolase. In some species, histidine is converted to via urocanate and then formimino-L-glutamate to glutamate in four steps, where the fourth step is conversion of N-formimino-L-glutamate to L-glutamate and formamide. In others, that pathway from formimino-L-glutamate may differ, with the next enzyme being formiminoglutamate hydrolase (HutF) yielding N-formyl-L-glutamate. This model represents the enzyme N-formylglutamate deformylase, also called N-formylglutamate amidohydrolase, which then produces glutamate. [Energy metabolism, Amino acids and amines].	1.10367e-45
NC_016590.1\|WP_014193904.1\|1314301_1315048_+\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|227278	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning].	1.87628e-27
NC_016590.1\|WP_085952674.1\|1312596_1313220_-\|septal-ring-lytic-transglycosylase-RlpA-family-protein	gnl\|CDD\|223868	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane].	1.24724e-46

>NC_016590.1|WP_085952674.1|1312596_1313220_-|septal-ring-lytic-transglycosylase-RlpA-family-protein
MSYRLIPWAVCALLSGCAGHIKQPSSKEDLPSTIPGKVTPDVNVEASAASASLADSAPILAPATPAPAPTAAFNFAQTGIASCYARRFQGRRTASGERFDMHALTAAHRTLPLGSYARVSNASRTRSVIVRINDRGPFVKGRVIDLSSAAAKALGMSEAGTQSVIVEGVRREDHVIVSAKRSHPYGHHAHRRHASAAHAHANVHRHS
>NC_016590.1|WP_014193901.1|1312193_1312514_-|pyrimidine/purine-nucleoside-phosphorylase
MTAATQFDQVSVIKRANVYFDGKCVSHTVLFADGTKKTLGVILPGALNFGTDAPELMEVQAGQCRIRLDGSDEWKTYGAGESFSVPGKSRFDIDVIETLDYVCSYL
>NC_016590.1|WP_014193900.1|1311087_1312116_-|hypothetical-protein
MQPPTNDRSEQLAEAAAAAFSEATGFTARRVATPKRGDSDAAIEFRFGGARFKRAVQVRETIDRFAALSAHSEVLIRDSGRKPTLVTTYLSPDMIRACRELGVDALDLAGNASLVEGDSLVVVSGRPRVLQNNARRSANWTKATLRVTLALLITPALLERGYREIAQVAGVSHGTVQNALRALIDHRDVFERPDGRGLQFADRARLIDEWVTLYPRQLRESLLLGRYRAESNDWWRDVPDLTEQCRFGGEPAAAILTDYLKPATVTAYCADAIPREWIMKARLRPDPAGNVEFLRAPVPFASIDGLPPNVVAPLIVYADLVASGDPRNLDTARMLRERYLAD
>NC_016590.1|WP_050878586.1|1310240_1311068_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MDASTVAMLREVVAAADAMRIAWFVGGASARDILLTHVHDIEATRATADIDIGVSIRSWSGHDALRRALIASGHFTAPKASAHRLNYSVPGSGARTWLDIVPFGGVQDAQGEIAWPPDGSVRMNVAGFRQALDGALDVRIAGHLVVPVASLPAQAMLKIIAWQDRHASDRKDAIDLLFLMARYAQAGNIDRLYADAFDLVERHGHDPDIAGAALLARDTAALADEDVRAQMLAILRPDDPAPPILTHMLGARMPVFEDDTSERVAALFHAFREAL
>NC_016590.1|WP_014193898.1|1309219_1310236_+|1-aminocyclopropane-1-carboxylate-deaminase
MNLQRFPRYPLTFGPTPIQPLKRLSAHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPEAIAEGCDTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRMMGADVRLVADGFDIGIRKSWQEAMESVRAAGGKPFPVPAGCSEHPLGGLGFVGFAEEVRAQEAELGFKFDYIVVCSVTGSTQAGMVVGFAADGRARRVIGIDASAKPEQTHAQIVRIAKHTAGLVDLGQDITPDDVILDTRFGGPEYGLPNDGTLEAIRLCARFEGVLTDPVYEGKSMDGMIQMVRNGEFPEGSKVLYAHLGGVPALNAYSYLFRNG
>NC_016590.1|WP_014193897.1|1308546_1309074_-|Lrp/AsnC-family-transcriptional-regulator
MKKPASAPDPRPTGVQTDRVDRAILRQLQRDASISNVALAEKVNLSPPACLRRVERLREAGLIRATVALLDPKALDAGMLVLIGVILDRSTPDSFADFEKAAQKVPGCMECHVVTGEFDFFMLIRTRDSESFNRLHAEKLLYLPGVRQIRTFIVLREILSTTAFPIGDSAGARTS
>NC_016590.1|WP_041732728.1|1306084_1308463_-|transglycosylase-domain-containing-protein
MTASDFKASLRAVLARAKSWLRPHLRPRSLLLLPALLLIYVLVLIPFTPGIRDIRRAKVDQPAQIYSADGKLLAEFKPTHREWVSLKDISPQVIDALIATEDRRFYQHHGIDFRRTAGAALRTFSGDRQGGSTLTQQLARNLYPEDIGRSQTLTRKVKEAITAFKIEAVYSKDEILETYLNTVPFLYNAYGIEMAARTYFDKSAGQLDVLESATLIGMLKGNSYYNPVLNPERALDRRNIVLGQMVKFGHLPPAKLDALRKRPLRIDFERQTEEPGRAPHFAQQLRKWLIAWADDNDYNIYSDGLVVRTTIDSRLQTMATNALALQGNQLQSIANAAWGGRGGCANANADLAHAFIRETDPYRALRAGGANDADALKHLGADRAFMQTLCEDKTRVQAAFVALDPRNGQIRAWVGSRDFTQDPFDHVAQARRQPGSTFKPFVYGAAFDRGAKPADTLVDQAVEIPIRGDEIWRPTDDSPPSGRPVSLRDGIAYSKNRITAQLMESVGPARVARLARDMGVRESHLDVVPSLALGTSPVTLKEMVSAYGTIANDGSYIEPLLVTRIENKDGEVLAQFESQPERALSVDATRKLVDVMRDVINRGTGTAIRTRFGVRADVAGKTGTTQDNADGWFILMHPQLVAGAWVGFNDSRVTLRSDYWGQGAHSALPIVGDFMQRSLRSHLIDARARFDTQETPGFWETRLTRLRTWIAQTFTSEPKPSAAKQTSVQKPARVKRAPAEPEAEVTEAQAEPPVFTTLPPILPAPGAASGAAASAAPAAPPAPPEAASDAQP
>NC_016590.1|WP_014193895.1|1304777_1305998_+|hypothetical-protein
MLPNNTQADNQADITVVNAPLATRRKLLTSLIAGGGAMVLAACGGGGDGTPDSVADRWRRRNNGGSGTASPSTPASSATPASSASAAAPASAPAPASSTSAAADTAGTIAASSFGVKADGKTNDRAALQAAIDGSVGQILLISGQVRIDTTGLTLRSNSHIRFASGASIKLLSHNADIYQMMRIVDVSNVVVENAYLDGSKELNSASGGEHGMGFTIMGATNVTLTSPTTINTWGDGIYINDSQSKKNTPTYNLRVDNHKADGCRRQGVSIISGDTITFNSPIWQNINGTAPACGLDFEPNDNSAVFKNITINSPTTANCKGGGINVWFGSLPGPISKTVTIAINNHVDTTSQGGSFAVQGLSLDGYIVNGQISSSNPKWKYPLIVEQWDNNGPRINVTNPTIVKS
>NC_016590.1|WP_014193894.1|1302112_1303480_-|polysaccharide-biosynthesis-C-terminal-domain-containing-protein
MLSTAVQSVRRRLGGVHQDHKRIARSAVVLLAFVILGKCIGASKEMAIAYRYGISGTVDAYQLALTLVTWLPTMLTNVLSVLLIPALVSLKDDKSEQNGFLGELEGVGLVIGLLSCLLLWLLWPFMAEAVGSNLAESTREICRHMIIGMTPVGVLTFTICISSARLQASGKHINTLLECVPAIGLLVFVLAAHDSESIWPLVVGTSLGFVVQSAWLRVLARRADSMPAAPRVSARAKQWPATIRSMGTLTIGSLVAGLWLPLDQYFMAQQGDGAIATLGYANRLLSLVLSMGALAITRATLPILAEILHRGDHARARSTALKWSGVMTAVGLSGGIIAYALAPFVVKLLFQKGAFTADDTIAVTTLFRYGLLQVPFYFGMCVLVQLFASETRYRAITVFSLIGFATKVVGNIVLIRLYGAQGVLLATGIGAFVVLACYIFWTRFAPPFVAPEARS
>NC_016590.1|WP_014193893.1|1299789_1301733_+|acyltransferase
MNFRSDINGLRAFAVIAVVLFHFGVPGFKGGFIGVDVFFVISGYLMTSIIFRRMEKGKFSVMEFYADRARRIIPALAVLCFLLTVFGWLVFLPSEFRAFGKAGASSLGFFSNIVYWREAGYFDVRSHLKWLLHTWSLSVEWQFYLLYPLGILLVRKLFGLRGTKIALVGVALVSFAVCAYLSDPTKWPTAAFFLLPTRAWEMLAGGLVCLFPMEASRSSRPMRRTMELVGLAMIVYGALTFNEDDAWPGFLALVPVLGTALVILAARGKSIFTGNRPAQFIGTISYSVYLWHWPFVVALTYFDKDGSLPWRVAAIAGGFVMGYLSYALVESKTRKPASGEARVFPRLMTLRPMLVFTLLLAVGGGSIYASQGVPGRFDRSVSIADSETYDTNPHTTKCHMMIDPCDVAARQKSSRVVVIGDSHAEAIAEAVVEAVPNGHPGDVLLITIEGCPTIYGIRRGNGDCFDQDRKYIEILSRDQTAKTPVIIANHWSQYWSGPTMDDFSFVNLDAPGQTRAPFTTERYRENLLSTVCRISKIRPVYLVEPIPEFDFNVPLTLAREKMRNPKAPDLSIPLNDYVARNGALLKAMDDAHDQCGIHLLDPRPYLCPDGKCMGSHEGRPLYSDYHHMSEYGNRFLVPMFRRVFEQG
>NC_016590.1|WP_014193904.1|1314301_1315048_+|peptidoglycan-DD-metalloendopeptidase-family-protein
MQFNSINTHGARRKKAGAASVFMCATLILTGCAGNAPKLAPEPASPDSLTVRAVEVAAPPGYYVAAPGDTLASIAVAYGRDVSLLAAWNGMTADANVVPGMRLHVGPPATVAVAQPATASAPAVEPRAGAFPWPVNGPVIAAFGTAGSKGIRIGGSAGAPIKSVRDGRVVYLGKNIPGYGNLVVIKHNQHLITAYGTLRRTLVREGATVKQGQVIAEMGAQPDGQSSLLFEVRKDRTPVDPSAYLGSQ
>NC_016590.1|WP_175582542.1|1315344_1315509_+|hypothetical-protein
MQHFLRFSRFYGGKAFVRPKRGEAAAGRIAETHAGRAFRRRKRLFADAGGAQPV
>NC_016590.1|WP_014193905.1|1315811_1316543_+|Crp/Fnr-family-transcriptional-regulator
MLTLQSDLHGNHLLGALPPQEWQAIAPHLELVQLRTEQLLCDSGQRIHHVYFPTTAIISLLHTMEDGGSVEVAAVGREGMSGVPVLTGGDTMPTRVQVQCAGVAYRMSAGALREAFGRSDFLRRVMLLYMQALLTQVAQTAACNRHHSLSRQLCRWLLIQTDRTPNDQLRVTQQMIADMLGVRREGVTEAAGKLHDAGLIHHSRGCIKILDRAGLEERACECYGIVKREFDRMLPRRQMEAVV
>NC_016590.1|WP_014193906.1|1317481_1318813_+|epoxide-hydrolase
MSKTFIETPSRRRFIGVAAATVAAGAFTRLAFADEPIHSTAGIVQVKSGDKTAIRPLRVHASDAQIADLKRRVKATKWPERETVADASQGVQFATMQQLAHYWASAYDWRKAEARLNAVPNFVTEIDGLDIHFIHVRSKHPNALPMIVTHGWPGSIIEQLKIIDPLTNPTAHGGSAADAFDVVIPSLPGYGFSGKPAATGWDPQRIARAWIALMKRLGYTRYVAQGGDWGNAVTEQMALVAPPELIGIHTNMPATVPDDIANALKLGEPAPAGLSADEKHAFDQLDFFYRHGLGYAQEMANRPQTLYGIEDSPIGLAAWMIDHDAASQALIARVFAGEREGLSRDDILDNITLYWLTNTGISSARLYWENKLVFFAPKHVAIPVAVSVFPDEIYAAPQSWAEKAYPKLIHYNRLPKGGHFAAWEQPQAFTAEIRESFRPLRQG
>NC_016590.1|WP_014193907.1|1318916_1319774_+|N-formylglutamate-amidohydrolase
MQKPAYGHVIRGDSPILLATPHTGTALPDVLLAHPAWRPIGGRLSDPAGVALLAAARERDVTSIAAQVHPCVIDLNVALDNRPLLQRLNRTGLCRTHTSRGEALYAPGSEPGEAEVEQRVDRYWRPFHAALTDELLRLRGLHGNVLLFVSHASSWLSPYRSDTGAPDCNAGTHQGASCDRRLVAALTEAVQGKGRSWVVNGKLADAFAARRYGMPENGIHVIEVEVAGRWRGELDMQAHAHDTAANAAEAGDMHAILDALGAALGRLPPADARFDARLVADDPAV
>NC_016590.1|WP_041732731.1|1319844_1320846_+|LysR-family-transcriptional-regulator
MKERAPEHYPDWDLLASWVAVVEAGSISDAASRLAISQAGVSQRIKALETILDTTLLDRATRPARPTAAGQRLFEHATVLLQGADQMVESVRNVTRAKRVAVRLGCVDSFAATIGPIIIKALSGTSHQIRLWSGITPTLDGQLEARQLDMAITTTGFSQAPGIRRRKLFSESYFVVLPRGFEVDRFTTIAELSRHLQFIRYSARSVIGQHVDAYLASNGENIERTCEFDATDPMLSLVAAGLGFAITTPLCLWQSRHYVPDVRVVPLSSFSRHGRAYQGLSRSFYLAYRENELGNLPTELHDLLRRAYERQVSRDIAQALALPHEQVCPPEDE
>NC_016590.1|WP_014193909.1|1321026_1322637_+|L-glutamate-gamma-semialdehyde-dehydrogenase
MNPRPQFPLPANETELSFRPGTAAAADLGKALQQRDVVEIPTVIGGKRYFSNDVVEVRAPHDHQRLLARIHRPTEAQINEAIASSKSVAKDWASLTHASRATILHRAADIVATRSRMKINAATMLGQSKTIDQAEPDSACELIDFLRFNAYNAQRVYAEQPMSVPTAVNRTDWRPLEGFVYAVSPFNFTAIGGNLTTAPAIMGNTVLWKPSEKSALANYIFFEALEEAGLPPGVINFVPGDAELTTRVALSSPDLAGIHFTGSSAVFQSLWKGVASKVDAFRTIPRLVGETGGKDFVLAHASANASEVAIALIRGAFEYCGQKCSAASRAYIPKSLWGAVSKELRERLATLKVGDVANHDTFMGAVISQASHQKLSRVLAAAKDDAAVKFVSGGKTWSDPGYFVEPTVLEVSDPHHALMKEELFGPVLSVFVYEDNAWNETLELIDATSPYALTGSIFCTDRFALHHAESVLVNAAGNLYLNDKPTGAMIGQQPFGGGRASGTNDKAGSYLNLLRWASPRVVKETYLPQRDWTFGA
>NC_016590.1|WP_041732732.1|1322662_1324129_-|MFS-transporter
MSKIEDEIANDSTSDQVHESYGDPYETQVEKPDEKLDEIQDETRSELKPEREPEAPAVARTGPLSEAKLFGRQTPPAADATPHAPHTPHAPHVPAGPASSYRALAGLLCSYALLIAGNGLFQTLIPLRVLQSGYPTIVIGLIQSCYYAGFILGAVFNRRLIDRIGQHRTFVAFSAAAAILALAFGAAQSPWTLAAVRLLTGFAFMGLYTSIESWLNGTVENEKRGQVFGSYAAINYLAVGTGQFLLNVGAGTGGQQFSIAAALFAAAVLPVTLLEGWPVKVADERLHRVPARTWRESVREMMASAPLAVPGCILAGFIYSSFYAMMPVYLERAGFSRSELATFMGVALIGALVPQWPMGRLSDKVDRRRLVYLTASTSAALSVVLFLFDVRAVTWVATLVYVAVTFTQYGLIVSHVQDRTEAQHRVAISALLLVLFSFGGMSGPALASAMMTIVGPSGLFLFNALSCALLALAARRALGIHLRSSGAG
>NC_016590.1|WP_014193911.1|1324375_1325179_+|N-formylglutamate-deformylase
MTADAFHFQQGRIPLLISIPHLGTEIPADVRSQLTDAASETADTDWHLDRLYDFALRAGASMLGARYSRYVIDLNRPASGESLYPGQTTTGLCPTETFRGVPLYRDGGGPQPHEVQRRLEAYWKPYHAKLREELDRLRAQFGAVLLWEAHSIASVLPRLFEGKLPDLNIGTNSGASCDGAVVEAIAGALDGRPYSWVVDGRFKGGYITRAYGHPADGVHAVQLEMCQSTYMDEDAPFAYRAELADAVQPVVEGMVMAGYGAVGLRGR
>NC_016590.1|WP_148276226.1|1325476_1326172_+|hypothetical-protein
MGSPEAQDYVGELLSAPEAAPEISKQMRACALGQGYGPAGYALGIDLETDGRKSEAVVAYQKAIGAGNTQSAFELSQGFGTRLASDQRGDLGISQDLERASRYEKIWKFLDDNESLNPTLPDIDKIVPLPPAKLPPWDGTFEWQKRQDAAVPPQKPSDELVNRLAKEKGLDPATGLRVSGLPGDPLPDEKSGAPTPSGYIATNAEQSLRKEEKLPLLAVEKPRPFACSIAC

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5368 : 33210

Acidithiobacillus_phage(16.67%)

integrase,plate

attL 7545:7570|attR 10988:11013

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041732420.1\|5368_5752_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_014192792.1\|5857_6625_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	5.5e-73	55.4
7545:7570	attL	NA	NA	NA	NA
WP_014190258.1\|7674_8937_+\|integrase	tyrosine-type recombinase/integrase	A0A142F1N9	Bacillus_phage	1.6e-08	20.7
WP_014190257.1\|8933_9926_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	2.8e-05	43.8
WP_014253235.1\|9922_10927_+\|integrase	site-specific integrase	A0A0K2FN88	Mycobacterium_phage	3.4e-06	24.3
WP_014192796.1\|11907_12570_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
10988:11013	attR	NA	NA	NA	NA
WP_014192797.1\|12566_13913_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_081478245.1\|13980_15387_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_148276177.1\|15762_18060_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	4.7e-11	30.9
WP_041732425.1\|18031_18910_+	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_014192800.1\|18987_21654_+	hypothetical protein	NA	NA	NA	NA
WP_014192801.1\|22277_22718_+	hypothetical protein	NA	NA	NA	NA
WP_081478246.1\|22803_23055_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	6.0e-05	36.4
WP_148276178.1\|23147_24287_+	hypothetical protein	NA	NA	NA	NA
WP_014192803.1\|24314_27806_+	type VI secretion protein VasK	NA	NA	NA	NA
WP_014192804.1\|27844_28711_+	hypothetical protein	NA	NA	NA	NA
WP_014192805.1\|28753_30340_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_014192806.1\|30358_32182_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_050878569.1\|32256_33210_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NC_016591

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_016591_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_016591_1

27951-28026

Orphan

Consensus_repeat	Method
CCGGCAAATGTGCCACGTTTAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_016591_1

>merge|NC_016591|1|27951-28026|CRISPRCasFinder
CCGGCAAATGTGCCACGTTTAGTCTTCCCAAATCACTGCGAATGAAGCAGCGCCGGCAAATGTGCCACGTTTAGTG

>NC_016591|1|1|27951-28026|CRISPRCasFinder
CCGGCAAATGTGCCACGTTTAGT	CTTCCCAAATCACTGCGAATGAAGCAGCG
CCGGCAAATGTGCCACGTTTAGTG

Protein	Signature genes	Signature genes Name	Protein_function
NC_016591.1\|WP_014194171.1\|30823_32053_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236669
NC_016591.1\|WP_041734128.1\|32179_32383_+\|hypothetical-protein	unknown	unknown	unknown
NC_016591.1\|WP_014194173.1\|33104_33929_-\|HDOD-domain-containing-protein	unknown	unknown	gnl\|CDD\|370050
NC_016591.1\|WP_014194170.1\|29390_30815_+\|replication-initiation-protein	unknown	unknown	unknown
NC_016591.1\|WP_014194169.1\|25053_27708_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|236645
NC_016591.1\|WP_014194164.1\|15622_17326_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|234698
NC_016591.1\|WP_014194174.1\|34015_34987_-\|5'-3'-exonuclease	unknown	unknown	gnl\|CDD\|350210
NC_016591.1\|WP_011876172.1\|18494_19613_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NC_016591.1\|WP_014194177.1\|36710_38078_+\|phosphoadenosine-phosphosulfate-reductase-family-protein	unknown	unknown	gnl\|CDD\|238846
NC_016591.1\|WP_014194162.1\|14209_14554_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NC_016591.1\|WP_014194167.1\|21731_22211_+\|hypothetical-protein	unknown	unknown	unknown
NC_016591.1\|WP_014194168.1\|22244_24950_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|376350
NC_016591.1\|WP_014194176.1\|35225_36584_-\|exodeoxyribonuclease-VII-large-subunit	unknown	unknown	gnl\|CDD\|234714
NC_016591.1\|WP_014194178.1\|38209_38824_+\|hypothetical-protein	unknown	unknown	unknown
NC_016591.1\|WP_050878697.1\|14550_14973_-\|IS66-family-insertion-sequence-hypothetical-protein	unknown	unknown	gnl\|CDD\|225511
NC_016591.1\|WP_014194175.1\|34983_35211_-\|hypothetical-protein	unknown	unknown	unknown
NC_016591.1\|WP_014194161.1\|12592_14179_-\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NC_016591.1\|WP_014194166.1\|19609_20764_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
NC_016591.1\|WP_014194172.1\|32427_33093_-\|hypothetical-protein	unknown	unknown	unknown
NC_016591.1\|WP_014194165.1\|17575_17953_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_016591.1\|WP_014194169.1\|25053_27708_+\|EAL-domain-containing-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	1.70003e-123
NC_016591.1\|WP_014194164.1\|15622_17326_+\|site-specific-integrase	gnl\|CDD\|234698	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed.	5.5793e-31
NC_016591.1\|WP_014194171.1\|30823_32053_-\|hypothetical-protein	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0.000129636
NC_016591.1\|WP_011876172.1\|18494_19613_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	1.04975e-31
NC_016591.1\|WP_014194173.1\|33104_33929_-\|HDOD-domain-containing-protein	gnl\|CDD\|370050	pfam08668, HDOD, HDOD domain.	4.62941e-71
NC_016591.1\|WP_014194177.1\|36710_38078_+\|phosphoadenosine-phosphosulfate-reductase-family-protein	gnl\|CDD\|238846	cd01713, PAPS_reductase, This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase. PAPS reductase is part of the adenine nucleotide alpha hydrolases superfamily also including N type ATP PPases and ATP sulphurylases. A highly modified version of the P loop, the fingerprint peptide of mononucleotide-binding proteins, is present in the active site of the protein, which appears to be a positively charged cleft containing a number of conserved arginine and lysine residues. Although PAPS reductase has no ATPase activity, it shows a striking similarity to the structure of the ATP pyrophosphatase (ATP PPase) domain of GMP synthetase, indicating that both enzyme families have evolved from a common ancestral nucleotide-binding fold. The enzyme uses thioredoxin as an electron donor for the reduction of PAPS to phospho-adenosine-phosphate (PAP) . It is also found in NodP nodulation protein P from Rhizobium meliloti which has ATP sulphurylase activity (sulphate adenylate transferase) .	9.73891e-20
NC_016591.1\|WP_014194162.1\|14209_14554_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	6.001e-48
NC_016591.1\|WP_014194166.1\|19609_20764_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	8.73017e-40
NC_016591.1\|WP_014194168.1\|22244_24950_+\|EAL-domain-containing-protein	gnl\|CDD\|376350	pfam00563, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site.	5.59107e-31
NC_016591.1\|WP_014194176.1\|35225_36584_-\|exodeoxyribonuclease-VII-large-subunit	gnl\|CDD\|234714	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed.	1.96931e-77
NC_016591.1\|WP_050878697.1\|14550_14973_-\|IS66-family-insertion-sequence-hypothetical-protein	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.9114e-11
NC_016591.1\|WP_014194174.1\|34015_34987_-\|5'-3'-exonuclease	gnl\|CDD\|350210	cd09860, PIN_T4-like, FEN-like PIN domains of bacteriophage T3, T4 RNase H, T5-5'nuclease, and homologs. PIN (PilT N terminus) domain of bacteriophage T5-5'nuclease (5'-3' exonuclease or T5FEN), bacteriophage T4 RNase H (T4FEN), bacteriophage T3 (T3 phage exodeoxyribonuclease) and other similar 5' nucleases are included in this family. T5-5'nuclease is a 5'-3'exodeoxyribonuclease that also exhibits endonucleolytic activity on flap structures (branched duplex DNA containing a free single-stranded 5'end). T4 RNase H, which removes the RNA primers that initiate lagging strand fragments, has 5'- 3'exonuclease activity on DNA/DNA and RNA/DNA duplexes and has endonuclease activity on flap or forked DNA structures. Bacteriophage T3 is believed to function in the removal of DNA-linked RNA primers and is essential for phage DNA replication and also necessary for host DNA degradation and phage genetic recombination. These nucleases are members of the structure-specific, 5' nuclease family (FEN-like) that catalyzes hydrolysis of DNA duplex-containing nucleic acid structures during DNA replication, repair, and recombination. Canonical members of the FEN-like family possess a PIN domain with a two-helical structure insert (also known as the helical arch, helical clamp or I domain) of variable length (approximately 16 to 800 residues), and at the C-terminus of the PIN domain a H3TH (helix-3-turn-helix) domain, an atypical helix-hairpin-helix-2-like region. Both the H3TH domain (not included in this model) and the helical arch/clamp region are involved in DNA binding. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its putative active center, consisting of invariant acidic amino acid residues (putative metal-binding residues), is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons. In the T5-5'nuclease, structure-specific endonuclease activity requires binding of a single metal ion in the high-affinity, metal binding site 1, whereas exonuclease activity requires both, the high-affinity, metal binding site 1 and the low-affinity, metal binding site 2 to be occupied by a divalent cofactor. The T5-5'nuclease is reported to be able to bind several metal ions including, Mg2+, Mn2+, Zn2+ and Co2+, as co-factors.	6.91676e-70
NC_016591.1\|WP_014194161.1\|12592_14179_-\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	1.03044e-110

>NC_016591.1|WP_014194169.1|25053_27708_+|EAL-domain-containing-protein
MVRWRGKGSKNTRGLFLPLVYVGAAIAALVFGFVIYEIYDARADTRDEVQRDLKVLSSAAASQLKDYMDSISDVLSAAGISARPALRTPQSGSDAAKTLADVQGTQIGTPVSSLVIVDATGAPVLHTGPDPVPWSFAVGKVAIDAARTAHTDRIILVGPLRSDVDGSIGVYATKRVLDGSGQLIGAAIAPLTVSNVAFVGKEAIRKTGVFVSVMSIDGKLIARFPDPGSMKILKSYAGDAVHREISTHISGFVTATSSIDGVNRLMAYERVAGYPLATITGMNEQEIRARWQADAVRFILIAYLSLAVVVLLLVIIHRQLRQLARRTTAIEESERRFDRVLQELTDAVYVRDRDGRIVVANRKFGLLFGAEDTRSLVGKNIVELLAHTTKQMVAEVNNRVLNSHGAPLSLEIETTTHSAVLPIEYTFSAVDISGQSHVLCQMRDVTTRRQFEAQLVKQATFDEITGLPNRRLYIDRLSNALHRSKRDGTGCAVMFIDLDHFKRVNDTLGHPFGDQLLIAAAQRLSGLLRPGDTVARFGGDEFVLLMSDFTDPMECRIVAESIVEAFAAPFEIAARSISVGASVGVSVFPGDGTEPDILLQHADTAMYEAKSAGRSGFCFFNHDMNARVHDMLRIDARIRSALARNEISVLYQPIIDPVTREIVKAEALARWHSEDLGHVPPDKFIPVAEENGLIAQIGDWVLQEACMNAAKWSKELASPITVSVNVSAKQFDDPTFVDSVFAALETSKLPAHLLELEITERVLISDDETALETISALREIGVGLSLDDFGTGYSSLSYLTKFPLNTIKIDRAFVRDLDHDEQTQNLTRAIIAMAKSLDLKLIAEGVETQEQADKLILYGCEYLQGFYFGRSMTSSELIDLSSKD
>NC_016591.1|WP_014194168.1|22244_24950_+|EAL-domain-containing-protein
MFFYPLFPQLSAVPLRIITRGEIQQTAKRLKTGKARAGKREVEDGKVGKKVRGKKPKRMMIAVGVMSSFILTSVAGYEVYDRRNDAYREARSDIAVYSATLSRQAADIVRSQRVVISEVGRTLLRSEDARLTREETVRRVRAIALQSSVDNLFLYDAASNFLFDASEKPLDSPPYAPTLASLVSQGLVVEGPTPASPGHISASQALLSRSGRYRWIATSWIDFSPFEKTVSAVINDKGVKVDLITAAGRPLIASASDGIDLLAFGQEAVDAWGRGVSEEPVGAKFAGASVQKVVRQVGGAPLLLHVSIDDSVVDARWKRTGFYVAGLTAAGLILIWTLVFFVLRQINRLIELANRAEKGEAKFLEILSKLGDGVISTDLDGRIRFANHQALSLLGGTTRIGLSGEHLQSLLPPVPRDMFVALVSQPATASASGMHWDGRLQTESGRVVDSEIKAFLTGRVQKDGVVVTIHDATEQKVHEARLIDAATIDPVTHLSNLVTFSSRLAELLTSAKDTDTCHALLAVHADLAGGLPLAESVQSLAADRLLTITRDSDSLASDGSGRFFVLLRNIVEPVDMARVAQRIIAAYEAPLHLGNSKVQVVTRVGVALFPFDGITDDALLASANAAASSATMRPYRFANDAVCRQLLRFQSQADTVRSAIKSGHVNALYDPLVELRTGKRIGSLVSPHIRMGERNAPLDRFLSIIEEANLCRSADASVLTAVQHDLTTLASGRSVSQLLIPVQQDCFLSGDLMQMLSSIGLNTLSHVQVGFFVSELFPKKRLDHARTTIRQLRKAGFATYLGDFGVGLASLTELLSLGLDGVIVDHSIINAASAQDDAFAFLTALTSAASAGEMCVIATGVESEETASMLSNMGVDRATGPLFGRALTASALANIQPVGLT
>NC_016591.1|WP_014194167.1|21731_22211_+|hypothetical-protein
MSIAIVIKSGEGALFPNHDKSKPNDPILTGFLKIPLDENKKNVLTLDVAVWTKNNGKDYYSLSVGGIPATMFKEENKKDAESPDYAGSFGLGREMRISGWRKQKDGRPYISIALVEKTGNRAGLEQAAPEQVPTPPQENSQRQPAQAENSDGVPGFDFI
>NC_016591.1|WP_014194166.1|19609_20764_+|ParB/RepB/Spo0J-family-partition-protein
MKQSRRLGHDPQPASNGEDQPKHIQGVRVAELPPTNIDLPMSEILREKGIAVAGAAESVAPAPTMPSPAPNGSAVSRSEASNSVAPLAAPSPPTRPQAKTAVSPAAPHDGVTKLLNPALLLALDMIDPSPYQPRIIFDEDALASLADTISDSGLNNPIIVRLKSDGRYELIAGERRLLAHKLLRLPTIAAFVRELSDADAAIMATTDNDAREDLADFERGRSYKRLLDDKVVENQRELARRVGRSMATVSRCLAYFKLPQEVIGMLTSNPLLVGTKVVAELVSFAEQGYRPQVVEAVAKIEKTKLSQESALNWLKTEVRRMKNPSVAPAPRNLHVGGKSVAEVKVDGRKLILQCPKDVNPENLLTAIEKMLGTADLADLTPKAD
>NC_016591.1|WP_011876172.1|18494_19613_+|ParA-family-protein
MTVTELEVDAYTDFASLSFPPQFAADALRISPQTLKIIERDNQLKISRVSRGSVEVRSYSLADIFQIARIRRENKSTKAFSRPITVANFVPKGGTGKTTTTCDFAIQFAYLGLKVLVIDNDQQADASTMLGYDPDLTAEELIEMGVPADRGISGHIGNLMRIGNFYQPMTLDEVIKKPFGELGPHLIPAEDSLDDMDAALRSANGSDFRYSLFFEQARAGEIPHCDLSGYDVIIIDNAPAGSLLSRNSMVAADFLICPIRMDKFSYRALSRLAYKLNEFAKDFKRAPEIVAIPTMYVKNRPRIERNLSQLVSLFPGKVTENRLFYSEDYSKSLDEGIPLSMWRPGTDNSLGAMRDVFDEFVARIRAVTEGTK
>NC_016591.1|WP_014194165.1|17575_17953_-|hypothetical-protein
MGLLNDKQVEFIEAIIFHADFVDTVSLIVAVIFVIVARKRRKQHRSATYAGFWSMTTGTDFVTGGGLFPLLALAASFFSERLLANLVHHDHIVLPLAGISSFFAIVHVALQETGPVKAGVPESAG
>NC_016591.1|WP_014194164.1|15622_17326_+|site-specific-integrase
MKTSYTLTLRSNDASAEGFPRADELAALRAWYAGLSTREAVQRYLPLALGARKSARGVLGQIRRRLLAIAGAAQRDDLIQLLAHPAQKREQYAKAVGLAIEALRTARPPEPAIADDVALWFSPRAARVLHAQGITTLADLTVRIPRRRQWWKGVPGLGAASARAIEAFFAARPALTDKARTLIAASQRDDIVPWEAIRLPHEVDGSEGKFRAPRATCTLDASNDYAAVQTWLTMHESPSTQRTYRKEAERLILWAIVERGRALSSLTTEDAIAYRTFLRHPTPRDRWIGPVRPRSSPDWRPFNGNLSARSVAHALSIIGALFRWLVEQRYVLANPFAGIKVRGSNPTALDASHAFTDGEWALVRAIADGLEWSNGWAIPAAQRLRFLLDFGYATGLRASELVGATLGGVETDARGDHWLRVNGKGKKLARVALPPLAWDALARYLAERGLPVVPVHWQPKTPIIGSLDTDRGTAISSVRLWMIMRRFFLLSADSIEADHAPLADKLRRASPHWMRHTHATHALGSGAELTAVRDNLRHASVSTTSIYLHSDEVKRARQMANAFTTPK
>NC_016591.1|WP_050878697.1|14550_14973_-|IS66-family-insertion-sequence-hypothetical-protein
MGTKMAEIVDRKCEAPGKRPNFAREFKRQLVEQTFEPGASVSLVARRNDINTNLLFRWRRQYLQGAFGAPRPFGPARQEPDGDVASLLPVSIAPEAEASMPVREAVSEDACEIEFDRARLRIRGNVSPDMLRLLIRELSR
>NC_016591.1|WP_014194162.1|14209_14554_-|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MIGLPPGTRIWIAAGVTDMRSGFPALAAKVQSALEENPLGGDVFIFRGRRGDLVKILWATDDGLWLLAKRLSHGRFIWPQADGGKIFLTSAQLSMLLEGIDWRQPRRTAALSML
>NC_016591.1|WP_014194161.1|12592_14179_-|IS66-family-transposase
MPDHAPLPDTIAELHALVLEQQASMAKMRQEIAERDREIVERDQEVERLKAQIDKRRRMHFGRKSEQLDRQIDRLETQLEDLSAGSGVADVRRARARASSSGVSAASPKEALAPHLPREEHELEPDSICPKCNNAMELLGEDVSEQLARVTAMFKVIRTIRRKRICTGCGHIAQPPMPGLPIERSIAHPSLLAEIIVAEYANHTPLYRQSEIAARDGVRLDRATMARWVGQCEELCRLLTEALRRYTMATAKIHADDTPIPVLAPGNKKTKTGRLWVYVRDNRRSGSNEPASVWFAYSPDRKGIHPQTHLAGFKGILQADGYAGFNELNEGGKVRLAFCWDHARRYVFNAHETAPSDTTKQWLDMIGEFYGIEADIRGKTPDERRRVRQEKSAPLLVALETSMREKLATLWPKASLVEAINYSLNRWDGLTLFCDDGRVEVSNVLAENALRCVALGRRNFMFAGSDSGGERAAAMYSLIGSCKLNGVNPRAYLEYVLTHIADHQANRIDELLPWNVAKHLLPSAPSSG
>NC_016591.1|WP_014194170.1|29390_30815_+|replication-initiation-protein
MKTRRQRRKRAVVGRTESSRSKMVVVKDEEAETPVELRKAPETIIIRNMSSNGEITYLQRKAYNAMVHIAQKNRKGDEVTFEVSVAEFASLCGQNTPNSRDYLKQMAREVASIRAEFDFRGDSKSGRSGWGVANMIAEVYISDDGQSIKFSFPSELAKRVLDPEIYNRIDMRMQNVFTSHSALTLWEITTRYWGSPNRRTFREHWTTWSVILSGQKEPHAQFRDFNKMLVRALDQVNAHESRFKVIPHLSKQGRKMDELWFVLEDQEQPQLPLDSLPAMVSEELIKRLRAFGVLDEEVSSIALSYDEEYLLAQADYTDKRLKKKDDPVTSPKAFFMSAVEGNYAKSPRRTVSAAATATQALPRPLEKLPVKHDAKQALSTVKDAWKKAKLEEIRATFVVQTDEKQAEIVAGVEDDLRKIAIAWKQYSSKGITKLVETTVIDLIFKKNVPEPSAEELLQFALETGSLTAGAAAST
>NC_016591.1|WP_014194171.1|30823_32053_-|hypothetical-protein
MNTEAFAADLRRLKIPPPDRNTLMGVYDLEGDYITKAVPECDRDNERALHYLRGIFFTVTPTLKERLQRRNMMIPSLKVLVEIGKREGPQFARRLKQWDEAGEDGDDSRYIRLTMAKFLQQEAEDGNGTSRPQQPPNKRPGNGQAHERPQQQQVPPRMPAARAQDRSASAPTQDRRPQTQQSPTPSGNQRGQERPPPPPLSQQHQQPPEAARGQRQRDDRDDFPAPPGDEAPQQQEKDYLSQHIYGGKAAACFSADTTRSGTATVRIEAAESKGQRQYDWKDKVSIQLSSRELPLVLATMMQWLPLFEGKGHGANNEKWFALENQAGKLYLSVNCKGKNVRGVPIMAGDAYSICTLIMRQMLKNDPFLSSEALLMIVKKQGELHLGGQRGTTANAEGNRRPAREQAYAN
>NC_016591.1|WP_041734128.1|32179_32383_+|hypothetical-protein
MDAIDVTNDKPNKVPGGFRFKQSTLVDLLKLAALETVARGEKVHQQTLVEEAVDLYVQRLKEKHSLV
>NC_016591.1|WP_014194172.1|32427_33093_-|hypothetical-protein
MQTGLRLYQAIIDQSQTLDIEFEVAASACEFSADLLMSCFGEPTREKPHDLYEILTRKRINAISKFLDCSGFRVFLLADVFKWHDYRLISSSSVFVVDKAQIEGKANEAASYLRSVVQANIFGSPEFIVEEFVAATWSKTLAEACTKVDVSYRKLLSWKNRVATPGLGDLKEVRLIAEAMEMGTPIVMGSLGLLQRQDFLLHDELIDFEKELNAALDVEIW
>NC_016591.1|WP_014194173.1|33104_33929_-|HDOD-domain-containing-protein
MNTLDKVFEQIVKLPTIPQVVLELVEMTRDDNVELTDVIEKVRQDQALSAKVIRVANSSFYGERGRISSVERAINIVGLHTLRTTVITTGVMAAFPRVKGMEMGQYWRHGLTSAYMALELARLNGTVDMEEAFTAGLMLGLGVLLIQLQMPDEAQIIGESVSPLDLASRLEVEREVLGFTHNEVSAELLARWRFPKSICEAILYYSKSMHGSLLCKIIFVSAAYAWSKISGLGSRSLMSSLDKKMITELGLTGEWVEGHGEMIAKSVDSIVISG
>NC_016591.1|WP_014194174.1|34015_34987_-|5'-3'-exonuclease
MMSLHFMLIDGNSVGYANQYSHTLTAQGMQVQAISGTLRSISKRIREYPDFFPIVLWDGRAQWRFDLYADYKSNRLKSESSRAARAAYEKQQPYLRIMAEKLGLTQIVAPCAEADDVGYQLALILLSMGHKVLFVTSDTEWLQGYQEGLSWLDPKTDKFIASASDMEAHVGTSDPRAYIEAKALAGDTSDTIAGVPRIGITTALKVFAQFGGSMDAFYAHAEAGKVDLKKKTLNSLASAEGRAIFARNMKLMDLAAAPKLTESEIVVSREPVDHIVFTDWAEHFSFSSILRNVGEFISPFERSTEHLGFGEMQRAVAALSARA
>NC_016591.1|WP_014194175.1|34983_35211_-|hypothetical-protein
MTTSTNHSGTPEATSFKEAYAKLKQTAETMRSQQEPDIDALVPMVDSAVANYAICTQRIEAVRLLLNQKLGVEGK
>NC_016591.1|WP_014194176.1|35225_36584_-|exodeoxyribonuclease-VII-large-subunit
MNQTPDTNEEQPGESLSFFLKKISTVIQQHADEAWVVAEISSLSSSRGAGHVYLDLVEHDDAGQEIAKVRANMWAGAKQAVLGKFEAETGSKLEAGMKVLLRVAPTFHIQFGLAVIVKDIEPSFTVGDMQRKLAKIRADLAASGVIDWNRNRNVPGEFARIAVISPPDAAGLGDFKSQADILEDAGLCSFEYFHARFQGKGAPDEIVSAMRAALIRNRDAAQGRHYDALVIIRGGGSAADLAHLNDFAIANAICRTPLPVMVGIGHERDSAILDEVACYSAHTPSKLIAYITSIIFNNAQAAMRDWQFITAFAMRSVAVAQEATEAQIQAVKVGGQKWLELAEVRSLSHIEMVTATAKASLVHAEQRISSSLETIRMSANHLLDTAKREAQNAFATVIGMGPKRTLERGFVITRHAGKAVSRMEQARSLSDLELEFSDGRIAVSIVSDVTNP
>NC_016591.1|WP_014194177.1|36710_38078_+|phosphoadenosine-phosphosulfate-reductase-family-protein
MSEIKHLTSMLPGCYQLPGNPERDVYIVPLSGGADSSALAIMLRAMFPHVSFVYVFTDTGAEEPEIYTTLDKLEEFLQQKIERVFSGKGLYEMIEEWGGFLPSPRDRWCTAQLKARPFADWVKRYSGQQKYMFVGIRADEQRLAFTMDEVSTEMPYVDLGVRREDVFNVLQSTIGIPKFYARRVRSGCSCCPFQRRSELAGLLQEKPVEFRRAMKYEKLSEQDASRQPVALSFSEESGVAGNWMSLPLPSGDSLAGRAGRKDSLSLFPEKGIFVGAEFFVDSGLVGDEFIWHRRVVSYSSSLAGIKRQLQERYKHLLSTYEAVDFGSADEVRQKARFAIYYIQAPSDVFDPDGPVGDGTYTWHAGESMRQMEHIMSWATRILHAEGMRQEAEQYAGARETSWAYEQHLGAVAALHKVKGETGQVVNSMWFVPNEPQAVDESDFDERYIACPMCQL
>NC_016591.1|WP_014194178.1|38209_38824_+|hypothetical-protein
MQMLVQERVTDSDMASAPSTLFVVREVEIARMAPNRSRIAGIRLPGAIVSIDYHFGWKSWTLRTEPFEQRATDYVRYTLPQAVAAFEKLVGLHLPDIRVIEYGVGLYSAASSTISENPWALRDGGTYEVRHPSNGCKRYSAKIRHDRCMVVPLARNGEPITDAEFDPRLWTIEEWKSLRECPAAAQAQTGLSVGPLGLDTTAAN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_016591_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_016591_2

28221-28318

Orphan

Consensus_repeat	Method
CCGGCAAATGTGCCACGTTTAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_016591_2

>merge|NC_016591|2|28221-28318|CRISPRCasFinder
GCCAGAAATGTGCCATGGTTAGTCGCCGTAAACCTCCGGAGGCCAGCGTTCGAGCAGAAGTCGGCCGGACCAGAAGTCGGAAATGTGCCACGTTTAGT

>NC_016591|2|2|28221-28318|CRISPRCasFinder
GCCAGAAATGTGCCATGGTTAGT	CGCCGTAAACCTCCGGAGGCCAGCGTTCGAGCAGAAGTCGGCCGGACCAGAA
GTCGGAAATGTGCCACGTTTAGT

Protein	Signature genes	Signature genes Name	Protein_function
NC_016591.1\|WP_014194171.1\|30823_32053_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236669
NC_016591.1\|WP_041734128.1\|32179_32383_+\|hypothetical-protein	unknown	unknown	unknown
NC_016591.1\|WP_014194173.1\|33104_33929_-\|HDOD-domain-containing-protein	unknown	unknown	gnl\|CDD\|370050
NC_016591.1\|WP_014194170.1\|29390_30815_+\|replication-initiation-protein	unknown	unknown	unknown
NC_016591.1\|WP_014194169.1\|25053_27708_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|236645
NC_016591.1\|WP_014194164.1\|15622_17326_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|234698
NC_016591.1\|WP_014194174.1\|34015_34987_-\|5'-3'-exonuclease	unknown	unknown	gnl\|CDD\|350210
NC_016591.1\|WP_011876172.1\|18494_19613_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NC_016591.1\|WP_014194177.1\|36710_38078_+\|phosphoadenosine-phosphosulfate-reductase-family-protein	unknown	unknown	gnl\|CDD\|238846
NC_016591.1\|WP_014194162.1\|14209_14554_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NC_016591.1\|WP_014194167.1\|21731_22211_+\|hypothetical-protein	unknown	unknown	unknown
NC_016591.1\|WP_014194168.1\|22244_24950_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|376350
NC_016591.1\|WP_014194176.1\|35225_36584_-\|exodeoxyribonuclease-VII-large-subunit	unknown	unknown	gnl\|CDD\|234714
NC_016591.1\|WP_014194178.1\|38209_38824_+\|hypothetical-protein	unknown	unknown	unknown
NC_016591.1\|WP_050878697.1\|14550_14973_-\|IS66-family-insertion-sequence-hypothetical-protein	unknown	unknown	gnl\|CDD\|225511
NC_016591.1\|WP_014194175.1\|34983_35211_-\|hypothetical-protein	unknown	unknown	unknown
NC_016591.1\|WP_014194161.1\|12592_14179_-\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NC_016591.1\|WP_014194166.1\|19609_20764_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
NC_016591.1\|WP_014194172.1\|32427_33093_-\|hypothetical-protein	unknown	unknown	unknown
NC_016591.1\|WP_014194165.1\|17575_17953_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_016591.1\|WP_014194169.1\|25053_27708_+\|EAL-domain-containing-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	1.70003e-123
NC_016591.1\|WP_014194164.1\|15622_17326_+\|site-specific-integrase	gnl\|CDD\|234698	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed.	5.5793e-31
NC_016591.1\|WP_014194171.1\|30823_32053_-\|hypothetical-protein	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0.000129636
NC_016591.1\|WP_011876172.1\|18494_19613_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	1.04975e-31
NC_016591.1\|WP_014194173.1\|33104_33929_-\|HDOD-domain-containing-protein	gnl\|CDD\|370050	pfam08668, HDOD, HDOD domain.	4.62941e-71
NC_016591.1\|WP_014194177.1\|36710_38078_+\|phosphoadenosine-phosphosulfate-reductase-family-protein	gnl\|CDD\|238846	cd01713, PAPS_reductase, This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase. PAPS reductase is part of the adenine nucleotide alpha hydrolases superfamily also including N type ATP PPases and ATP sulphurylases. A highly modified version of the P loop, the fingerprint peptide of mononucleotide-binding proteins, is present in the active site of the protein, which appears to be a positively charged cleft containing a number of conserved arginine and lysine residues. Although PAPS reductase has no ATPase activity, it shows a striking similarity to the structure of the ATP pyrophosphatase (ATP PPase) domain of GMP synthetase, indicating that both enzyme families have evolved from a common ancestral nucleotide-binding fold. The enzyme uses thioredoxin as an electron donor for the reduction of PAPS to phospho-adenosine-phosphate (PAP) . It is also found in NodP nodulation protein P from Rhizobium meliloti which has ATP sulphurylase activity (sulphate adenylate transferase) .	9.73891e-20
NC_016591.1\|WP_014194162.1\|14209_14554_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	6.001e-48
NC_016591.1\|WP_014194166.1\|19609_20764_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	8.73017e-40
NC_016591.1\|WP_014194168.1\|22244_24950_+\|EAL-domain-containing-protein	gnl\|CDD\|376350	pfam00563, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site.	5.59107e-31
NC_016591.1\|WP_014194176.1\|35225_36584_-\|exodeoxyribonuclease-VII-large-subunit	gnl\|CDD\|234714	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed.	1.96931e-77
NC_016591.1\|WP_050878697.1\|14550_14973_-\|IS66-family-insertion-sequence-hypothetical-protein	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.9114e-11
NC_016591.1\|WP_014194174.1\|34015_34987_-\|5'-3'-exonuclease	gnl\|CDD\|350210	cd09860, PIN_T4-like, FEN-like PIN domains of bacteriophage T3, T4 RNase H, T5-5'nuclease, and homologs. PIN (PilT N terminus) domain of bacteriophage T5-5'nuclease (5'-3' exonuclease or T5FEN), bacteriophage T4 RNase H (T4FEN), bacteriophage T3 (T3 phage exodeoxyribonuclease) and other similar 5' nucleases are included in this family. T5-5'nuclease is a 5'-3'exodeoxyribonuclease that also exhibits endonucleolytic activity on flap structures (branched duplex DNA containing a free single-stranded 5'end). T4 RNase H, which removes the RNA primers that initiate lagging strand fragments, has 5'- 3'exonuclease activity on DNA/DNA and RNA/DNA duplexes and has endonuclease activity on flap or forked DNA structures. Bacteriophage T3 is believed to function in the removal of DNA-linked RNA primers and is essential for phage DNA replication and also necessary for host DNA degradation and phage genetic recombination. These nucleases are members of the structure-specific, 5' nuclease family (FEN-like) that catalyzes hydrolysis of DNA duplex-containing nucleic acid structures during DNA replication, repair, and recombination. Canonical members of the FEN-like family possess a PIN domain with a two-helical structure insert (also known as the helical arch, helical clamp or I domain) of variable length (approximately 16 to 800 residues), and at the C-terminus of the PIN domain a H3TH (helix-3-turn-helix) domain, an atypical helix-hairpin-helix-2-like region. Both the H3TH domain (not included in this model) and the helical arch/clamp region are involved in DNA binding. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its putative active center, consisting of invariant acidic amino acid residues (putative metal-binding residues), is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons. In the T5-5'nuclease, structure-specific endonuclease activity requires binding of a single metal ion in the high-affinity, metal binding site 1, whereas exonuclease activity requires both, the high-affinity, metal binding site 1 and the low-affinity, metal binding site 2 to be occupied by a divalent cofactor. The T5-5'nuclease is reported to be able to bind several metal ions including, Mg2+, Mn2+, Zn2+ and Co2+, as co-factors.	6.91676e-70
NC_016591.1\|WP_014194161.1\|12592_14179_-\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	1.03044e-110

>NC_016591.1|WP_014194169.1|25053_27708_+|EAL-domain-containing-protein
MVRWRGKGSKNTRGLFLPLVYVGAAIAALVFGFVIYEIYDARADTRDEVQRDLKVLSSAAASQLKDYMDSISDVLSAAGISARPALRTPQSGSDAAKTLADVQGTQIGTPVSSLVIVDATGAPVLHTGPDPVPWSFAVGKVAIDAARTAHTDRIILVGPLRSDVDGSIGVYATKRVLDGSGQLIGAAIAPLTVSNVAFVGKEAIRKTGVFVSVMSIDGKLIARFPDPGSMKILKSYAGDAVHREISTHISGFVTATSSIDGVNRLMAYERVAGYPLATITGMNEQEIRARWQADAVRFILIAYLSLAVVVLLLVIIHRQLRQLARRTTAIEESERRFDRVLQELTDAVYVRDRDGRIVVANRKFGLLFGAEDTRSLVGKNIVELLAHTTKQMVAEVNNRVLNSHGAPLSLEIETTTHSAVLPIEYTFSAVDISGQSHVLCQMRDVTTRRQFEAQLVKQATFDEITGLPNRRLYIDRLSNALHRSKRDGTGCAVMFIDLDHFKRVNDTLGHPFGDQLLIAAAQRLSGLLRPGDTVARFGGDEFVLLMSDFTDPMECRIVAESIVEAFAAPFEIAARSISVGASVGVSVFPGDGTEPDILLQHADTAMYEAKSAGRSGFCFFNHDMNARVHDMLRIDARIRSALARNEISVLYQPIIDPVTREIVKAEALARWHSEDLGHVPPDKFIPVAEENGLIAQIGDWVLQEACMNAAKWSKELASPITVSVNVSAKQFDDPTFVDSVFAALETSKLPAHLLELEITERVLISDDETALETISALREIGVGLSLDDFGTGYSSLSYLTKFPLNTIKIDRAFVRDLDHDEQTQNLTRAIIAMAKSLDLKLIAEGVETQEQADKLILYGCEYLQGFYFGRSMTSSELIDLSSKD
>NC_016591.1|WP_014194168.1|22244_24950_+|EAL-domain-containing-protein
MFFYPLFPQLSAVPLRIITRGEIQQTAKRLKTGKARAGKREVEDGKVGKKVRGKKPKRMMIAVGVMSSFILTSVAGYEVYDRRNDAYREARSDIAVYSATLSRQAADIVRSQRVVISEVGRTLLRSEDARLTREETVRRVRAIALQSSVDNLFLYDAASNFLFDASEKPLDSPPYAPTLASLVSQGLVVEGPTPASPGHISASQALLSRSGRYRWIATSWIDFSPFEKTVSAVINDKGVKVDLITAAGRPLIASASDGIDLLAFGQEAVDAWGRGVSEEPVGAKFAGASVQKVVRQVGGAPLLLHVSIDDSVVDARWKRTGFYVAGLTAAGLILIWTLVFFVLRQINRLIELANRAEKGEAKFLEILSKLGDGVISTDLDGRIRFANHQALSLLGGTTRIGLSGEHLQSLLPPVPRDMFVALVSQPATASASGMHWDGRLQTESGRVVDSEIKAFLTGRVQKDGVVVTIHDATEQKVHEARLIDAATIDPVTHLSNLVTFSSRLAELLTSAKDTDTCHALLAVHADLAGGLPLAESVQSLAADRLLTITRDSDSLASDGSGRFFVLLRNIVEPVDMARVAQRIIAAYEAPLHLGNSKVQVVTRVGVALFPFDGITDDALLASANAAASSATMRPYRFANDAVCRQLLRFQSQADTVRSAIKSGHVNALYDPLVELRTGKRIGSLVSPHIRMGERNAPLDRFLSIIEEANLCRSADASVLTAVQHDLTTLASGRSVSQLLIPVQQDCFLSGDLMQMLSSIGLNTLSHVQVGFFVSELFPKKRLDHARTTIRQLRKAGFATYLGDFGVGLASLTELLSLGLDGVIVDHSIINAASAQDDAFAFLTALTSAASAGEMCVIATGVESEETASMLSNMGVDRATGPLFGRALTASALANIQPVGLT
>NC_016591.1|WP_014194167.1|21731_22211_+|hypothetical-protein
MSIAIVIKSGEGALFPNHDKSKPNDPILTGFLKIPLDENKKNVLTLDVAVWTKNNGKDYYSLSVGGIPATMFKEENKKDAESPDYAGSFGLGREMRISGWRKQKDGRPYISIALVEKTGNRAGLEQAAPEQVPTPPQENSQRQPAQAENSDGVPGFDFI
>NC_016591.1|WP_014194166.1|19609_20764_+|ParB/RepB/Spo0J-family-partition-protein
MKQSRRLGHDPQPASNGEDQPKHIQGVRVAELPPTNIDLPMSEILREKGIAVAGAAESVAPAPTMPSPAPNGSAVSRSEASNSVAPLAAPSPPTRPQAKTAVSPAAPHDGVTKLLNPALLLALDMIDPSPYQPRIIFDEDALASLADTISDSGLNNPIIVRLKSDGRYELIAGERRLLAHKLLRLPTIAAFVRELSDADAAIMATTDNDAREDLADFERGRSYKRLLDDKVVENQRELARRVGRSMATVSRCLAYFKLPQEVIGMLTSNPLLVGTKVVAELVSFAEQGYRPQVVEAVAKIEKTKLSQESALNWLKTEVRRMKNPSVAPAPRNLHVGGKSVAEVKVDGRKLILQCPKDVNPENLLTAIEKMLGTADLADLTPKAD
>NC_016591.1|WP_011876172.1|18494_19613_+|ParA-family-protein
MTVTELEVDAYTDFASLSFPPQFAADALRISPQTLKIIERDNQLKISRVSRGSVEVRSYSLADIFQIARIRRENKSTKAFSRPITVANFVPKGGTGKTTTTCDFAIQFAYLGLKVLVIDNDQQADASTMLGYDPDLTAEELIEMGVPADRGISGHIGNLMRIGNFYQPMTLDEVIKKPFGELGPHLIPAEDSLDDMDAALRSANGSDFRYSLFFEQARAGEIPHCDLSGYDVIIIDNAPAGSLLSRNSMVAADFLICPIRMDKFSYRALSRLAYKLNEFAKDFKRAPEIVAIPTMYVKNRPRIERNLSQLVSLFPGKVTENRLFYSEDYSKSLDEGIPLSMWRPGTDNSLGAMRDVFDEFVARIRAVTEGTK
>NC_016591.1|WP_014194165.1|17575_17953_-|hypothetical-protein
MGLLNDKQVEFIEAIIFHADFVDTVSLIVAVIFVIVARKRRKQHRSATYAGFWSMTTGTDFVTGGGLFPLLALAASFFSERLLANLVHHDHIVLPLAGISSFFAIVHVALQETGPVKAGVPESAG
>NC_016591.1|WP_014194164.1|15622_17326_+|site-specific-integrase
MKTSYTLTLRSNDASAEGFPRADELAALRAWYAGLSTREAVQRYLPLALGARKSARGVLGQIRRRLLAIAGAAQRDDLIQLLAHPAQKREQYAKAVGLAIEALRTARPPEPAIADDVALWFSPRAARVLHAQGITTLADLTVRIPRRRQWWKGVPGLGAASARAIEAFFAARPALTDKARTLIAASQRDDIVPWEAIRLPHEVDGSEGKFRAPRATCTLDASNDYAAVQTWLTMHESPSTQRTYRKEAERLILWAIVERGRALSSLTTEDAIAYRTFLRHPTPRDRWIGPVRPRSSPDWRPFNGNLSARSVAHALSIIGALFRWLVEQRYVLANPFAGIKVRGSNPTALDASHAFTDGEWALVRAIADGLEWSNGWAIPAAQRLRFLLDFGYATGLRASELVGATLGGVETDARGDHWLRVNGKGKKLARVALPPLAWDALARYLAERGLPVVPVHWQPKTPIIGSLDTDRGTAISSVRLWMIMRRFFLLSADSIEADHAPLADKLRRASPHWMRHTHATHALGSGAELTAVRDNLRHASVSTTSIYLHSDEVKRARQMANAFTTPK
>NC_016591.1|WP_050878697.1|14550_14973_-|IS66-family-insertion-sequence-hypothetical-protein
MGTKMAEIVDRKCEAPGKRPNFAREFKRQLVEQTFEPGASVSLVARRNDINTNLLFRWRRQYLQGAFGAPRPFGPARQEPDGDVASLLPVSIAPEAEASMPVREAVSEDACEIEFDRARLRIRGNVSPDMLRLLIRELSR
>NC_016591.1|WP_014194162.1|14209_14554_-|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MIGLPPGTRIWIAAGVTDMRSGFPALAAKVQSALEENPLGGDVFIFRGRRGDLVKILWATDDGLWLLAKRLSHGRFIWPQADGGKIFLTSAQLSMLLEGIDWRQPRRTAALSML
>NC_016591.1|WP_014194161.1|12592_14179_-|IS66-family-transposase
MPDHAPLPDTIAELHALVLEQQASMAKMRQEIAERDREIVERDQEVERLKAQIDKRRRMHFGRKSEQLDRQIDRLETQLEDLSAGSGVADVRRARARASSSGVSAASPKEALAPHLPREEHELEPDSICPKCNNAMELLGEDVSEQLARVTAMFKVIRTIRRKRICTGCGHIAQPPMPGLPIERSIAHPSLLAEIIVAEYANHTPLYRQSEIAARDGVRLDRATMARWVGQCEELCRLLTEALRRYTMATAKIHADDTPIPVLAPGNKKTKTGRLWVYVRDNRRSGSNEPASVWFAYSPDRKGIHPQTHLAGFKGILQADGYAGFNELNEGGKVRLAFCWDHARRYVFNAHETAPSDTTKQWLDMIGEFYGIEADIRGKTPDERRRVRQEKSAPLLVALETSMREKLATLWPKASLVEAINYSLNRWDGLTLFCDDGRVEVSNVLAENALRCVALGRRNFMFAGSDSGGERAAAMYSLIGSCKLNGVNPRAYLEYVLTHIADHQANRIDELLPWNVAKHLLPSAPSSG
>NC_016591.1|WP_014194170.1|29390_30815_+|replication-initiation-protein
MKTRRQRRKRAVVGRTESSRSKMVVVKDEEAETPVELRKAPETIIIRNMSSNGEITYLQRKAYNAMVHIAQKNRKGDEVTFEVSVAEFASLCGQNTPNSRDYLKQMAREVASIRAEFDFRGDSKSGRSGWGVANMIAEVYISDDGQSIKFSFPSELAKRVLDPEIYNRIDMRMQNVFTSHSALTLWEITTRYWGSPNRRTFREHWTTWSVILSGQKEPHAQFRDFNKMLVRALDQVNAHESRFKVIPHLSKQGRKMDELWFVLEDQEQPQLPLDSLPAMVSEELIKRLRAFGVLDEEVSSIALSYDEEYLLAQADYTDKRLKKKDDPVTSPKAFFMSAVEGNYAKSPRRTVSAAATATQALPRPLEKLPVKHDAKQALSTVKDAWKKAKLEEIRATFVVQTDEKQAEIVAGVEDDLRKIAIAWKQYSSKGITKLVETTVIDLIFKKNVPEPSAEELLQFALETGSLTAGAAAST
>NC_016591.1|WP_014194171.1|30823_32053_-|hypothetical-protein
MNTEAFAADLRRLKIPPPDRNTLMGVYDLEGDYITKAVPECDRDNERALHYLRGIFFTVTPTLKERLQRRNMMIPSLKVLVEIGKREGPQFARRLKQWDEAGEDGDDSRYIRLTMAKFLQQEAEDGNGTSRPQQPPNKRPGNGQAHERPQQQQVPPRMPAARAQDRSASAPTQDRRPQTQQSPTPSGNQRGQERPPPPPLSQQHQQPPEAARGQRQRDDRDDFPAPPGDEAPQQQEKDYLSQHIYGGKAAACFSADTTRSGTATVRIEAAESKGQRQYDWKDKVSIQLSSRELPLVLATMMQWLPLFEGKGHGANNEKWFALENQAGKLYLSVNCKGKNVRGVPIMAGDAYSICTLIMRQMLKNDPFLSSEALLMIVKKQGELHLGGQRGTTANAEGNRRPAREQAYAN
>NC_016591.1|WP_041734128.1|32179_32383_+|hypothetical-protein
MDAIDVTNDKPNKVPGGFRFKQSTLVDLLKLAALETVARGEKVHQQTLVEEAVDLYVQRLKEKHSLV
>NC_016591.1|WP_014194172.1|32427_33093_-|hypothetical-protein
MQTGLRLYQAIIDQSQTLDIEFEVAASACEFSADLLMSCFGEPTREKPHDLYEILTRKRINAISKFLDCSGFRVFLLADVFKWHDYRLISSSSVFVVDKAQIEGKANEAASYLRSVVQANIFGSPEFIVEEFVAATWSKTLAEACTKVDVSYRKLLSWKNRVATPGLGDLKEVRLIAEAMEMGTPIVMGSLGLLQRQDFLLHDELIDFEKELNAALDVEIW
>NC_016591.1|WP_014194173.1|33104_33929_-|HDOD-domain-containing-protein
MNTLDKVFEQIVKLPTIPQVVLELVEMTRDDNVELTDVIEKVRQDQALSAKVIRVANSSFYGERGRISSVERAINIVGLHTLRTTVITTGVMAAFPRVKGMEMGQYWRHGLTSAYMALELARLNGTVDMEEAFTAGLMLGLGVLLIQLQMPDEAQIIGESVSPLDLASRLEVEREVLGFTHNEVSAELLARWRFPKSICEAILYYSKSMHGSLLCKIIFVSAAYAWSKISGLGSRSLMSSLDKKMITELGLTGEWVEGHGEMIAKSVDSIVISG
>NC_016591.1|WP_014194174.1|34015_34987_-|5'-3'-exonuclease
MMSLHFMLIDGNSVGYANQYSHTLTAQGMQVQAISGTLRSISKRIREYPDFFPIVLWDGRAQWRFDLYADYKSNRLKSESSRAARAAYEKQQPYLRIMAEKLGLTQIVAPCAEADDVGYQLALILLSMGHKVLFVTSDTEWLQGYQEGLSWLDPKTDKFIASASDMEAHVGTSDPRAYIEAKALAGDTSDTIAGVPRIGITTALKVFAQFGGSMDAFYAHAEAGKVDLKKKTLNSLASAEGRAIFARNMKLMDLAAAPKLTESEIVVSREPVDHIVFTDWAEHFSFSSILRNVGEFISPFERSTEHLGFGEMQRAVAALSARA
>NC_016591.1|WP_014194175.1|34983_35211_-|hypothetical-protein
MTTSTNHSGTPEATSFKEAYAKLKQTAETMRSQQEPDIDALVPMVDSAVANYAICTQRIEAVRLLLNQKLGVEGK
>NC_016591.1|WP_014194176.1|35225_36584_-|exodeoxyribonuclease-VII-large-subunit
MNQTPDTNEEQPGESLSFFLKKISTVIQQHADEAWVVAEISSLSSSRGAGHVYLDLVEHDDAGQEIAKVRANMWAGAKQAVLGKFEAETGSKLEAGMKVLLRVAPTFHIQFGLAVIVKDIEPSFTVGDMQRKLAKIRADLAASGVIDWNRNRNVPGEFARIAVISPPDAAGLGDFKSQADILEDAGLCSFEYFHARFQGKGAPDEIVSAMRAALIRNRDAAQGRHYDALVIIRGGGSAADLAHLNDFAIANAICRTPLPVMVGIGHERDSAILDEVACYSAHTPSKLIAYITSIIFNNAQAAMRDWQFITAFAMRSVAVAQEATEAQIQAVKVGGQKWLELAEVRSLSHIEMVTATAKASLVHAEQRISSSLETIRMSANHLLDTAKREAQNAFATVIGMGPKRTLERGFVITRHAGKAVSRMEQARSLSDLELEFSDGRIAVSIVSDVTNP
>NC_016591.1|WP_014194177.1|36710_38078_+|phosphoadenosine-phosphosulfate-reductase-family-protein
MSEIKHLTSMLPGCYQLPGNPERDVYIVPLSGGADSSALAIMLRAMFPHVSFVYVFTDTGAEEPEIYTTLDKLEEFLQQKIERVFSGKGLYEMIEEWGGFLPSPRDRWCTAQLKARPFADWVKRYSGQQKYMFVGIRADEQRLAFTMDEVSTEMPYVDLGVRREDVFNVLQSTIGIPKFYARRVRSGCSCCPFQRRSELAGLLQEKPVEFRRAMKYEKLSEQDASRQPVALSFSEESGVAGNWMSLPLPSGDSLAGRAGRKDSLSLFPEKGIFVGAEFFVDSGLVGDEFIWHRRVVSYSSSLAGIKRQLQERYKHLLSTYEAVDFGSADEVRQKARFAIYYIQAPSDVFDPDGPVGDGTYTWHAGESMRQMEHIMSWATRILHAEGMRQEAEQYAGARETSWAYEQHLGAVAALHKVKGETGQVVNSMWFVPNEPQAVDESDFDERYIACPMCQL
>NC_016591.1|WP_014194178.1|38209_38824_+|hypothetical-protein
MQMLVQERVTDSDMASAPSTLFVVREVEIARMAPNRSRIAGIRLPGAIVSIDYHFGWKSWTLRTEPFEQRATDYVRYTLPQAVAAFEKLVGLHLPDIRVIEYGVGLYSAASSTISENPWALRDGGTYEVRHPSNGCKRYSAKIRHDRCMVVPLARNGEPITDAEFDPRLWTIEEWKSLRECPAAAQAQTGLSVGPLGLDTTAAN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_016591_1	1.1\|27974\|29\|NC_016591\|CRISPRCasFinder	27974-28002	29	NC_016591	Burkholderia sp. YI23 plasmid byi_2p, complete sequence	27974-28002	0	1.0
NC_016591_2	2.1\|28244\|52\|NC_016591\|CRISPRCasFinder	28244-28295	52	NC_016591	Burkholderia sp. YI23 plasmid byi_2p, complete sequence	28244-28295	0	1.0
NC_016591_1	1.1\|27974\|29\|NC_016591\|CRISPRCasFinder	27974-28002	29	CP000617	Burkholderia vietnamiensis G4 plasmid pBVIE01, complete sequence	207571-207599	3	0.897
NC_016591_1	1.1\|27974\|29\|NC_016591\|CRISPRCasFinder	27974-28002	29	NZ_CP032326	Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence	255254-255282	6	0.793

1. spacer 1.1|27974|29|NC_016591|CRISPRCasFinder matches to NC_016591 (Burkholderia sp. YI23 plasmid byi_2p, complete sequence) position: , mismatch: 0, identity: 1.0

cttcccaaatcactgcgaatgaagcagcg	CRISPR spacer
cttcccaaatcactgcgaatgaagcagcg	Protospacer
*****************************

2. spacer 2.1|28244|52|NC_016591|CRISPRCasFinder matches to NC_016591 (Burkholderia sp. YI23 plasmid byi_2p, complete sequence) position: , mismatch: 0, identity: 1.0

cgccgtaaacctccggaggccagcgttcgagcagaagtcggccggaccagaa	CRISPR spacer
cgccgtaaacctccggaggccagcgttcgagcagaagtcggccggaccagaa	Protospacer
****************************************************

3. spacer 1.1|27974|29|NC_016591|CRISPRCasFinder matches to CP000617 (Burkholderia vietnamiensis G4 plasmid pBVIE01, complete sequence) position: , mismatch: 3, identity: 0.897

cttcccaaatcactgcgaatgaagcagcg	CRISPR spacer
gttcccaaatcgctgcggatgaagcagcg	Protospacer
 **********.*****.***********

4. spacer 1.1|27974|29|NC_016591|CRISPRCasFinder matches to NZ_CP032326 (Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence) position: , mismatch: 6, identity: 0.793

cttcccaaatcactgcgaatgaagcagcg	CRISPR spacer
ccaacgaaatcactgcgaatgacgaagcg	Protospacer
*.  * **************** * ****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 14973

Stx2-converting_phage(75.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014194149.1\|1498_1867_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_144404190.1\|1833_2232_-\|transposase	transposase	NA	NA	NA	NA
WP_014194152.1\|3200_3503_-	Dabb family protein	NA	NA	NA	NA
WP_014194153.1\|4269_5817_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_014194154.1\|5875_7069_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_014194155.1\|7100_8570_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_014194156.1\|8628_9066_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_014194158.1\|9676_11086_+	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	1.8e-13	25.8
WP_014194159.1\|11198_11615_+	cupin domain-containing protein	NA	NA	NA	NA
WP_014194160.1\|11639_12095_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_014194161.1\|12592_14179_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.2e-129	56.1
WP_014194162.1\|14209_14554_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.5e-38	66.1
WP_050878697.1\|14550_14973_-	IS66 family insertion sequence hypothetical protein	B6DZU5	Stx2-converting_phage	1.4e-17	40.9

DBSCAN-SWA_2

18494 : 20764

Lactobacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011876172.1\|18494_19613_+	ParA family protein	E9LUK9	Lactobacillus_phage	2.2e-06	24.4
WP_014194166.1\|19609_20764_+	ParB/RepB/Spo0J family partition protein	S5WII0	Leptospira_phage	1.1e-05	28.5

DBSCAN-SWA_3

25053 : 27708

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014194169.1\|25053_27708_+	EAL domain-containing protein	G3MA91	Bacillus_virus	2.3e-17	30.5

DBSCAN-SWA_4

33104 : 36584

Phage_NCTB(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014194173.1\|33104_33929_-	HDOD domain-containing protein	A0A1C3NFB0	Phage_NCTB	2.7e-09	25.2
WP_014194174.1\|34015_34987_-	5'-3' exonuclease	A0A2H4P757	Pseudomonas_phage	1.4e-28	29.9
WP_014194175.1\|34983_35211_-	hypothetical protein	NA	NA	NA	NA
WP_014194176.1\|35225_36584_-	exodeoxyribonuclease VII large subunit	M1NLU2	Moumouvirus	6.4e-16	36.5

DBSCAN-SWA_5

41986 : 42451

EBPR_siphovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011876190.1\|41986_42451_+	DUF2591 domain-containing protein	F8TVJ2	EBPR_siphovirus	7.8e-14	39.4

DBSCAN-SWA_6

46999 : 50130

Ralstonia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011876195.1\|46999_47644_-	hypothetical protein	B2ZXV6	Ralstonia_phage	2.2e-22	37.7
WP_014194187.1\|47761_48142_+	hypothetical protein	NA	NA	NA	NA
WP_011876197.1\|48146_48710_+	hypothetical protein	NA	NA	NA	NA
WP_014194188.1\|48765_49317_+	hypothetical protein	NA	NA	NA	NA
WP_014194189.1\|49455_50130_+	hypothetical protein	I1TRH1	Cronobacter_phage	2.9e-25	44.2

DBSCAN-SWA_7

54137 : 55130

Bdellovibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011876205.1\|54137_55130_-	YqaJ viral recombinase family protein	H9C0I7	Bdellovibrio_phage	1.1e-22	31.4

DBSCAN-SWA_8

66175 : 67018

Lake_Baikal_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014194203.1\|66175_67018_-	DNA/RNA non-specific endonuclease	A0A2H4N7Z3	Lake_Baikal_phage	8.8e-24	32.0

DBSCAN-SWA_9

72262 : 79302

Stx2-converting_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014194208.1\|72262_74062_+	ATP-dependent helicase	A0A2I7RIK5	Vibrio_phage	9.9e-49	34.1
WP_041734131.1\|74182_74905_-	BON domain-containing protein	NA	NA	NA	NA
WP_014194210.1\|74901_76317_-	CHASE2 domain-containing protein	NA	NA	NA	NA
WP_014194212.1\|76927_78502_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.0e-142	53.0
WP_027803720.1\|78532_78877_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.2e-40	69.6
WP_014194214.1\|78873_79302_-\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	5.9e-08	48.5

DBSCAN-SWA_10

98263 : 101416

Streptomyces_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014194243.1\|98263_101416_-	error-prone DNA polymerase	R4TMT6	Streptomyces_phage	5.7e-92	27.2

DBSCAN-SWA_11

106992 : 108888

Rhizobium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014194249.1\|106992_108888_+	DNA ligase D	A0A068CDF3	Rhizobium_phage	3.6e-57	40.9

DBSCAN-SWA_12

116195 : 117425

Yersinia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014194261.1\|116195_117425_+	site-specific DNA-methyltransferase	A0A2C9CWM6	Yersinia_phage	6.0e-13	25.3

DBSCAN-SWA_13

133332 : 134301

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014194281.1\|133332_134301_+	hypothetical protein	A0A0A0RRM5	Mycobacterium_phage	2.2e-10	28.5

DBSCAN-SWA_14

145781 : 155064

Enterobacteria_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014194295.1\|145781_146324_+	DUF1643 domain-containing protein	A0A142F2K6	Mycobacterium_phage	9.1e-14	37.3
WP_014194296.1\|146338_146707_+	hypothetical protein	NA	NA	NA	NA
WP_014194299.1\|147702_148041_+	hypothetical protein	NA	NA	NA	NA
WP_011876331.1\|148089_148341_+	hypothetical protein	NA	NA	NA	NA
WP_014194300.1\|148842_149883_+	toxic anion resistance protein	H6X3X9	Enterobacteria_phage	1.3e-13	24.5
WP_011876333.1\|149894_150635_+	VWA domain-containing protein	I7HXI7	Enterobacteria_phage	7.2e-38	37.3
WP_011876334.1\|150671_151694_+	DUF475 domain-containing protein	K4JUR1	Caulobacter_phage	5.8e-70	45.7
WP_011876335.1\|151786_152443_+	TerD family protein	K4JRX3	Caulobacter_phage	1.0e-35	42.2
WP_014194301.1\|152504_153482_+	hypothetical protein	NA	NA	NA	NA
WP_014194302.1\|153996_155064_+	phage Gp37/Gp68 family protein	Q6JIJ3	Burkholderia_virus	7.3e-92	52.3

DBSCAN-SWA_15

161478 : 170871

Vibrio_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014194311.1\|161478_162054_+	HD domain-containing protein	A0A1S6L1R3	Vibrio_phage	4.5e-19	37.4
WP_011876352.1\|162099_162474_+	hypothetical protein	NA	NA	NA	NA
WP_011876353.1\|162554_162992_+	chemotaxis response regulator CheY	Q56AR1	Bacillus_thuringiensis_phage	1.1e-06	31.3
WP_014194312.1\|162984_164010_+	AI-2E family transporter	NA	NA	NA	NA
WP_011876355.1\|164098_164812_+	transcriptional regulator	NA	NA	NA	NA
WP_014194314.1\|165250_166213_-	hypothetical protein	I6NP86	Burkholderia_phage	1.9e-30	36.8
WP_014194315.1\|166339_167314_-	hypothetical protein	NA	NA	NA	NA
WP_014194316.1\|167424_168228_+	metallophosphoesterase	A0A0A0YWI7	Pseudomonas_phage	6.0e-46	44.3
WP_014194317.1\|168268_169054_-	hypothetical protein	NA	NA	NA	NA
WP_014194318.1\|169156_169711_+	hypothetical protein	NA	NA	NA	NA
WP_014194319.1\|169726_170347_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_014194320.1\|170343_170871_+	hypothetical protein	Q6NDX9	Leptospira_phage	8.8e-22	41.1

DBSCAN-SWA_16

182460 : 241608

Salmonella_phage(16.67%)

integrase,transposase

attL 212486:212501|attR 244343:244358

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014194335.1\|182460_183096_+	hypothetical protein	I6NP76	Burkholderia_phage	4.3e-07	37.5
WP_041734154.1\|183114_183330_+	hypothetical protein	NA	NA	NA	NA
WP_085952696.1\|183431_184653_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	4.4e-16	29.9
WP_014194339.1\|186794_187271_+	hypothetical protein	NA	NA	NA	NA
WP_014194340.1\|187336_188257_-	hypothetical protein	NA	NA	NA	NA
WP_148276374.1\|188510_188849_+	hypothetical protein	NA	NA	NA	NA
WP_011876385.1\|189148_189613_+	hypothetical protein	NA	NA	NA	NA
WP_014194342.1\|189734_190526_+	hypothetical protein	NA	NA	NA	NA
WP_014194343.1\|190572_191196_+	hypothetical protein	NA	NA	NA	NA
WP_014194344.1\|191582_192425_+	hypothetical protein	NA	NA	NA	NA
WP_014194345.1\|192553_193153_-	hypothetical protein	NA	NA	NA	NA
WP_081478344.1\|193402_194407_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_014194347.1\|194791_195193_+	hypothetical protein	NA	NA	NA	NA
WP_148276375.1\|195365_195575_-	hypothetical protein	NA	NA	NA	NA
WP_014194348.1\|195966_196482_+	hypothetical protein	NA	NA	NA	NA
WP_014194349.1\|196571_197030_-	hypothetical protein	NA	NA	NA	NA
WP_050878699.1\|197041_197497_-	hypothetical protein	NA	NA	NA	NA
WP_011645027.1\|197672_198635_-	SdiA-regulated domain-containing protein	NA	NA	NA	NA
WP_011645025.1\|198959_199811_-	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	1.1e-95	64.0
WP_011645024.1\|199825_201313_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	1.2e-238	87.5
WP_003124096.1\|201778_202339_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	2.1e-50	88.6
WP_014194351.1\|205219_208135_+\|transposase	Tn3-like element IS1071 family transposase	A0A1B0V7H9	Salmonella_phage	1.8e-52	24.1
WP_014194352.1\|208253_209300_+	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_014194353.1\|209304_209997_-	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_081478349.1\|210171_210903_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.7e-15	30.5
WP_033536329.1\|210917_211589_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_014194356.1\|211624_212557_-	MCE family protein	NA	NA	NA	NA
212486:212501	attL	NA	NA	NA	NA
WP_014194357.1\|212546_213359_-	ATP-binding cassette domain-containing protein	A0A2R8FFL6	Cedratvirus	4.8e-11	27.0
WP_014194358.1\|213355_214501_-	ABC transporter permease	NA	NA	NA	NA
WP_033536327.1\|214612_215239_-	general secretion pathway protein GspB	NA	NA	NA	NA
WP_148276377.1\|215390_216386_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_014194361.1\|216414_217686_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_001389365.1\|217714_218479_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_014194362.1\|218846_219551_-	DNA adenine methylase	A0A0M4S5U3	Salmonella_phage	9.2e-59	52.4
WP_014194363.1\|219699_220776_-	hypothetical protein	NA	NA	NA	NA
WP_041734157.1\|221283_221520_-	hypothetical protein	NA	NA	NA	NA
WP_014194364.1\|221538_222243_-	SprT-like domain-containing protein	NA	NA	NA	NA
WP_168196124.1\|222427_222601_-	hypothetical protein	NA	NA	NA	NA
WP_014194365.1\|222597_222996_-	hypothetical protein	NA	NA	NA	NA
WP_014194366.1\|223149_223941_+	hypothetical protein	E5FFG1	Burkholderia_phage	4.1e-15	41.6
WP_014194368.1\|224374_224719_+	hypothetical protein	A0A2I7S8K9	Vibrio_phage	1.8e-12	40.6
WP_013041567.1\|225917_226217_-	hypothetical protein	NA	NA	NA	NA
WP_013041566.1\|226209_226452_-	hypothetical protein	NA	NA	NA	NA
WP_006964370.1\|226451_226778_-	XRE family transcriptional regulator	NA	NA	NA	NA
WP_013041565.1\|226774_227149_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_014194370.1\|227570_227927_+	hypothetical protein	NA	NA	NA	NA
WP_014194371.1\|227923_228313_-	response regulator	NA	NA	NA	NA
WP_145206865.1\|228303_228486_-	hypothetical protein	NA	NA	NA	NA
WP_145206866.1\|228584_229544_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	6.5e-15	34.0
WP_021245899.1\|229959_231123_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_004213231.1\|231385_232030_-	MgtC/SapB family protein	G3MA03	Bacillus_virus	5.3e-13	41.5
WP_037492485.1\|232233_232635_-	mercuric resistance transcriptional repressor protein MerD	NA	NA	NA	NA
WP_014194375.1\|232694_233336_-	organomercurial lyase MerB	NA	NA	NA	NA
WP_004213235.1\|233332_234763_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.4e-45	28.7
WP_004213237.1\|234765_235014_-	mercury resistance system transport protein MerF	NA	NA	NA	NA
WP_004213238.1\|235024_235357_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_004213240.1\|235384_235783_-	mercury transporter MerT	NA	NA	NA	NA
WP_004213241.1\|235861_236275_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004213243.1\|236367_236937_-	recombinase family protein	A0A219Y9V9	Aeromonas_phage	3.1e-33	46.7
WP_010791757.1\|237125_238808_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	M4T586	Rhodobacter_phage	3.7e-05	24.7
WP_000393453.1\|238810_239719_+	TniB family NTP-binding protein	NA	NA	NA	NA
WP_011405615.1\|239715_240933_+	TniQ family protein	NA	NA	NA	NA
WP_010981357.1\|240993_241608_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	5.1e-37	51.0
244343:244358	attR	NA	NA	NA	NA

DBSCAN-SWA_17

250403 : 258899

Burkholderia_virus(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014194383.1\|250403_250931_-	single-stranded DNA-binding protein	I6NRL7	Burkholderia_virus	4.6e-47	81.6
WP_014194384.1\|251127_252033_-	recombination-associated protein RdgC	A0A218M310	Acidovorax_phage	3.4e-66	43.8
WP_014194385.1\|252094_252460_-	hypothetical protein	NA	NA	NA	NA
WP_041734160.1\|253293_255312_+	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	2.4e-112	37.3
WP_014194388.1\|255524_256277_-	hypothetical protein	NA	NA	NA	NA
WP_014194389.1\|256492_257950_-	replicative DNA helicase	A0A1B0VG30	Salmonella_phage	9.1e-85	41.6
WP_041734161.1\|257975_258899_-	YdaU family protein	A0A1B1IW09	uncultured_Mediterranean_phage	5.5e-11	31.0

DBSCAN-SWA_18

264970 : 269378

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014194397.1\|264970_266935_+	type IIA DNA topoisomerase subunit B	G3M9Z3	Bacillus_virus	1.0e-94	35.9
WP_014194398.1\|266951_269378_+	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	1.4e-85	37.1

DBSCAN-SWA_19

279567 : 280470

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011876144.1\|279567_280470_-	hypothetical protein	I3PUZ3	Vibrio_phage	1.6e-31	36.0

DBSCAN-SWA_20

297899 : 302360

Ralstonia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011876127.1\|297899_298343_-	lytic transglycosylase domain-containing protein	A0A0A8J856	Ralstonia_phage	3.0e-07	35.0
WP_014194416.1\|298388_299372_+	sel1 repeat family protein	NA	NA	NA	NA
WP_014194417.1\|299867_302360_-	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	M4QT32	Loktanella_phage	6.2e-150	40.6

DBSCAN-SWA_21

319480 : 322162

Bodo_saltans_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014194428.1\|319480_322162_+	topoisomerase C-terminal repeat-containing protein	A0A2H4UU47	Bodo_saltans_virus	3.3e-08	21.0

DBSCAN-SWA_22

330010 : 333012

Leptospira_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085952697.1\|330010_331134_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.1e-56	43.0
WP_014194440.1\|332082_333012_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	7.5e-08	24.2

DBSCAN-SWA_23

348722 : 349920

Pseudomonas_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085952698.1\|348722_349920_+\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	2.0e-101	65.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage