CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_HG938370	Burkholderia cenocepacia H111 chromosome 1	0 crisprs	csa3,cas3,DEDDh,RT,DinG	6
NZ_HG938371	Burkholderia cenocepacia H111 chromosome 2	1 crisprs	cas3,csa3,DinG	0
NZ_HG938372	Burkholderia cenocepacia H111 chromosome 3	0 crisprs	RT,csa3	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

100205 : 172400

Burkholderia_phage(70.97%)

holin,plate,integrase,tail

attL 100107:100137|attR 123014:123044

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
100107:100137	attL	NA	NA	NA	NA
WP_006496274.1\|100205_101282_-\|integrase	site-specific integrase	A0A1S5NNJ1	Burkholderia_phage	4.2e-164	81.7
WP_059721111.1\|101284_101557_+	hypothetical protein	NA	NA	NA	NA
WP_006496273.1\|101608_101980_-	hypothetical protein	NA	NA	NA	NA
WP_006496272.1\|101976_104769_-	toprim domain-containing protein	E5E3N5	Burkholderia_phage	0.0e+00	90.8
WP_006496271.1\|104774_105032_-	hypothetical protein	A4JWQ9	Burkholderia_virus	1.2e-13	57.1
WP_006485448.1\|105159_105408_-	ogr/Delta-like zinc finger family protein	K4PAZ0	Burkholderia_phage	3.5e-37	91.5
WP_006485450.1\|105589_105805_-	hypothetical protein	E5E3U1	Burkholderia_phage	4.4e-20	80.0
WP_077176263.1\|105931_106387_+	helix-turn-helix transcriptional regulator	E5E3U2	Burkholderia_phage	7.0e-44	62.3
WP_006485449.1\|106704_107001_+	hypothetical protein	E5E3U3	Burkholderia_phage	1.6e-12	50.5
WP_006496269.1\|107188_108259_-	phage late control D family protein	K4PAY4	Burkholderia_phage	1.4e-135	70.6
WP_006485447.1\|108255_108687_-\|tail	phage tail protein	K4NXK5	Burkholderia_phage	8.2e-42	67.4
WP_006496268.1\|108709_111280_-	hypothetical protein	E5E3U6	Burkholderia_phage	9.0e-136	46.8
WP_006484104.1\|111295_111409_-\|tail	GpE family phage tail protein	A0A089FGX3	Burkholderia_phage	1.1e-09	85.7
WP_171984197.1\|111417_111753_-\|tail	phage tail assembly protein	K4NXA3	Burkholderia_phage	1.5e-27	65.5
WP_006484101.1\|111864_112374_-\|tail	phage major tail tube protein	E5E3U9	Burkholderia_phage	1.5e-71	74.6
WP_006484096.1\|112402_113575_-\|tail	phage tail sheath protein	A4JWS7	Burkholderia_virus	3.0e-187	81.7
WP_006496267.1\|113629_114328_-\|tail	tail assembly chaperone	E5E3V1	Burkholderia_phage	2.3e-86	82.0
WP_006496266.1\|114344_116915_-	hypothetical protein	E5E3V2	Burkholderia_phage	6.8e-269	63.9
WP_006484097.1\|116921_117464_-\|tail	phage tail protein I	E5FFH2	Burkholderia_phage	5.2e-70	70.9
WP_006484106.1\|117456_118371_-\|plate	baseplate J/gp47 family protein	E5FFH3	Burkholderia_phage	1.5e-117	72.6
WP_006496265.1\|118367_118730_-	GPW/gp25 family protein	K4PAX6	Burkholderia_phage	1.5e-41	69.2
WP_006496264.1\|118726_119413_-\|plate	phage baseplate assembly protein V	K4NXJ5	Burkholderia_phage	4.4e-82	68.7
WP_006484113.1\|119922_120372_-\|tail	phage tail protein	E5E3V9	Burkholderia_phage	1.5e-30	54.2
WP_006496262.1\|120488_120929_-	protein lysB	K4NXJ2	Burkholderia_phage	2.4e-17	44.4
WP_043205315.1\|120925_121777_-	DUF3380 domain-containing protein	A4JWZ0	Burkholderia_virus	7.6e-92	65.8
WP_006484102.1\|121779_122046_-\|holin	phage holin family protein	E5E3W3	Burkholderia_phage	6.2e-24	65.5
WP_006484093.1\|122047_122392_-	membrane protein	A4JWU2	Burkholderia_virus	5.7e-38	77.9
WP_006484103.1\|122408_122615_-\|tail	tail protein X	E5E3W5	Burkholderia_phage	5.1e-18	64.7
WP_043205285.1\|123177_124797_+	TIGR04222 domain-containing membrane protein	NA	NA	NA	NA
123014:123044	attR	NA	NA	NA	NA
WP_046336751.1\|125036_126983_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_006496257.1\|127074_127806_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_043205283.1\|127810_128596_-	phytanoyl-CoA dioxygenase family protein	NA	NA	NA	NA
WP_043205306.1\|128620_129151_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_043205281.1\|129147_130119_-	hypothetical protein	NA	NA	NA	NA
WP_006496253.1\|130115_130817_-	WbqC family protein	NA	NA	NA	NA
WP_006496252.1\|130819_131965_-	dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA	A0A0P0CNN6	Ostreococcus_mediterraneus_virus	5.0e-14	24.8
WP_006496251.1\|131992_134341_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_006484091.1\|134598_134898_-	flagellar protein FliT	NA	NA	NA	NA
WP_006484094.1\|134923_136432_-	flagellar filament capping protein FliD	NA	NA	NA	NA
WP_006496250.1\|136564_137722_-	flagellin	NA	NA	NA	NA
WP_006401410.1\|138252_138465_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_043205278.1\|138631_140755_-	TonB-dependent receptor	NA	NA	NA	NA
WP_006496248.1\|140984_142220_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_006489711.1\|142318_142921_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
WP_006496247.1\|143062_143944_+	ATPase	NA	NA	NA	NA
WP_006496246.1\|144105_144930_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_006489324.1\|145060_145804_-	aquaporin Z	A0A1B1ISL4	uncultured_Mediterranean_phage	8.1e-05	50.8
WP_006489320.1\|146103_146400_+	H-NS histone family protein	F8TUP5	EBPR_podovirus	1.9e-10	41.1
WP_006489318.1\|146503_147568_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_006477348.1\|148198_148552_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_006493184.1\|148644_149199_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_006482649.1\|149379_150240_+	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_006482647.1\|150253_151273_+	flagellar motor protein MotB	NA	NA	NA	NA
WP_006482646.1\|151297_151675_+	response regulator	NA	NA	NA	NA
WP_006486165.1\|153973_154489_+	chemotaxis protein CheW	NA	NA	NA	NA
WP_006497455.1\|156484_157477_+	chemotaxis protein CheR	NA	NA	NA	NA
WP_006497454.1\|157473_158232_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA
WP_012492268.1\|158228_159320_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
WP_006485893.1\|159387_159783_+	chemotaxis protein CheY	Q56AR1	Bacillus_thuringiensis_phage	6.0e-07	31.9
WP_006497453.1\|159785_160517_+	protein phosphatase CheZ	NA	NA	NA	NA
WP_012492269.1\|160776_161280_+	DUF2844 domain-containing protein	NA	NA	NA	NA
WP_006497451.1\|161296_162535_+	DUF3443 family protein	NA	NA	NA	NA
WP_006485888.1\|162699_163197_+	VOC family protein	NA	NA	NA	NA
WP_006485884.1\|163626_164826_+	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
WP_006485892.1\|164822_166925_+	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
WP_006497450.1\|166921_168706_+	flagellar biosynthesis protein FlhF	NA	NA	NA	NA
WP_006491878.1\|168698_169517_+	flagellar biosynthesis protein FlhG	NA	NA	NA	NA
WP_006484033.1\|169539_170274_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA
WP_006484031.1\|170525_171944_+	adenosylhomocysteinase	S4VPF6	Pandoravirus	9.9e-44	30.1
WP_006477367.1\|172046_172400_+\|holin	phage holin family protein	NA	NA	NA	NA

DBSCAN-SWA_2

301713 : 358000

uncultured_Mediterranean_phage(40.0%)

protease,plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006494443.1\|301713_302427_+\|transposase	transposase	NA	NA	NA	NA
WP_006490631.1\|302715_307419_+	glutamate synthase subunit alpha	NA	NA	NA	NA
WP_006494441.1\|307504_308971_+	glutamate synthase subunit beta	NA	NA	NA	NA
WP_006490627.1\|309347_310838_+	alanine:cation symporter family protein	NA	NA	NA	NA
WP_006494440.1\|310834_311401_+	RNA 2',3'-cyclic phosphodiesterase	NA	NA	NA	NA
WP_006494439.1\|311433_312717_-	D-amino acid dehydrogenase	NA	NA	NA	NA
WP_006494438.1\|312742_314005_-	MFS transporter	NA	NA	NA	NA
WP_006494437.1\|314133_314910_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_006488528.1\|314906_316676_-	ABC transporter ATP-binding protein/permease	NA	NA	NA	NA
WP_006494435.1\|317295_318432_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_006488534.1\|318464_318662_+	sulfur carrier protein ThiS	NA	NA	NA	NA
WP_006494434.1\|318700_319516_+	thiazole synthase	NA	NA	NA	NA
WP_006494433.1\|319512_320637_+	thiamine phosphate synthase	NA	NA	NA	NA
WP_006477138.1\|320721_321543_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.1e-21	29.4
WP_006486220.1\|321539_322307_+	lipid asymmetry maintenance ABC transporter permease subunit MlaE	NA	NA	NA	NA
WP_006486221.1\|322331_322892_+	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA
WP_020979879.1\|322923_323886_+	VacJ family lipoprotein	NA	NA	NA	NA
WP_012492305.1\|323997_324627_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_006485329.1\|324623_324899_+	STAS domain-containing protein	NA	NA	NA	NA
WP_006485348.1\|325091_326018_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.2e-23	30.2
WP_023476193.1\|326074_326836_+	ABC transporter permease	NA	NA	NA	NA
WP_006477131.1\|326889_327129_+	BolA family transcriptional regulator	NA	NA	NA	NA
WP_006485350.1\|327143_328493_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_006477129.1\|328489_329143_+	ATP phosphoribosyltransferase	NA	NA	NA	NA
WP_006494431.1\|329167_330484_+	histidinol dehydrogenase	NA	NA	NA	NA
WP_006485351.1\|330582_331656_+	histidinol-phosphate transaminase	NA	NA	NA	NA
WP_006477126.1\|331721_332309_+	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_006485349.1\|332370_332991_+	YchE family NAAT transporter	NA	NA	NA	NA
WP_012492306.1\|332987_333629_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_006477123.1\|333792_334548_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_006485327.1\|334654_335428_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_006494429.1\|335427_335844_+	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA
WP_006485344.1\|335840_336206_+	phosphoribosyl-ATP diphosphatase	NA	NA	NA	NA
WP_006485332.1\|336276_336669_+	membrane protein	NA	NA	NA	NA
WP_006485352.1\|336700_337066_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_006477115.1\|337159_337390_+	Sec-independent protein translocase subunit TatA	NA	NA	NA	NA
WP_006494428.1\|337416_337956_+	Sec-independent protein translocase subunit TatB	NA	NA	NA	NA
WP_006485341.1\|337997_338786_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	1.8e-26	29.8
WP_006494427.1\|338993_340199_-	Do family serine endopeptidase	A0A1B1IRD3	uncultured_Mediterranean_phage	1.9e-11	34.3
WP_006485336.1\|340220_340967_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_006491868.1\|341185_341806_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
WP_006485333.1\|341805_343188_+	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA
WP_006477108.1\|343209_343968_+	cytochrome c1	NA	NA	NA	NA
WP_006400565.1\|344062_344674_+	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA
WP_006485328.1\|344745_345267_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	9.6e-21	52.0
WP_006485326.1\|345745_345949_+	hypothetical protein	NA	NA	NA	NA
WP_006494426.1\|346058_346859_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_006485338.1\|347140_347458_+	hypothetical protein	NA	NA	NA	NA
WP_006494425.1\|347539_347875_+	hypothetical protein	NA	NA	NA	NA
WP_006494424.1\|347989_348772_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_006477098.1\|348768_350115_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_006485335.1\|350220_350820_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_043204524.1\|351207_351834_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_006484395.1\|351880_352396_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_006484397.1\|352411_353902_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_006477093.1\|353972_354476_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_006477092.1\|354538_355024_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_006494422.1\|355100_356936_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_006494420.1\|356899_358000_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_3

660824 : 669897

Hokovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006484920.1\|660824_662777_+	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	2.5e-146	50.3
WP_006476837.1\|663030_664167_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	5.0e-22	26.9
WP_006497492.1\|664170_666093_+	aminodeoxychorismate synthase component I	S4VNU7	Pandoravirus	1.5e-55	37.6
WP_006485002.1\|666220_667036_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	1.8e-37	34.2
WP_006497491.1\|667079_667766_-	deoxynucleoside kinase	A0A0M3UL55	Enterococcus_phage	5.5e-08	27.1
WP_006476832.1\|667762_668305_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_006497490.1\|668340_669897_-	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	1.6e-23	30.8

DBSCAN-SWA_4

795437 : 802013

Enterobacteria_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006496668.1\|795437_796499_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.1e-86	47.4
WP_006496667.1\|796510_797404_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.3e-97	58.8
WP_006496666.1\|797388_797940_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.5e-52	55.2
WP_043205452.1\|797954_798881_+	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	6.1e-26	34.6
WP_171984179.1\|798877_800380_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	2.0e-58	30.8
WP_006496663.1\|800383_801202_+	ABC transporter permease	NA	NA	NA	NA
WP_006496662.1\|801206_802013_+	ABC transporter ATP-binding protein	Q66093	Chlorella_virus	9.4e-07	25.1

DBSCAN-SWA_5

1610562 : 1660660

Burkholderia_virus(27.59%)

tRNA,plate,tail,head,capsid,portal,integrase,terminase

attL 1640542:1640557|attR 1647998:1648013

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006495281.1\|1610562_1610862_+	hypothetical protein	E5E3P2	Burkholderia_phage	2.0e-15	53.6
WP_006495280.1\|1610960_1611260_+	hypothetical protein	NA	NA	NA	NA
WP_144417361.1\|1611261_1611621_+	hypothetical protein	A1YZR1	Burkholderia_virus	5.2e-42	66.7
WP_006495278.1\|1611630_1612515_+	hypothetical protein	Q8W6P2	Burkholderia_virus	1.4e-91	66.5
WP_080346051.1\|1612511_1613366_+	helix-turn-helix domain-containing protein	A0A1W6JTD5	Pseudomonas_phage	3.7e-30	47.6
WP_006495276.1\|1613370_1614051_+	hypothetical protein	NA	NA	NA	NA
WP_043204886.1\|1614047_1614593_+	DUF1064 domain-containing protein	A4JX56	Burkholderia_virus	1.8e-30	45.5
WP_158380833.1\|1614620_1614947_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_043204882.1\|1614943_1615387_+	DUF1364 family protein	Q3HR02	Burkholderia_phage	9.8e-75	88.4
WP_043204881.1\|1615389_1615722_+	hypothetical protein	Q6JIF6	Burkholderia_virus	6.7e-36	71.3
WP_052739281.1\|1615772_1615958_+	hypothetical protein	A4JX60	Burkholderia_virus	8.9e-14	55.0
WP_144417362.1\|1615927_1616215_+	hypothetical protein	Q6V7S5	Burkholderia_virus	1.4e-13	46.8
WP_006495270.1\|1616268_1616700_+	hypothetical protein	NA	NA	NA	NA
WP_144417363.1\|1616822_1617128_+	hypothetical protein	NA	NA	NA	NA
WP_173448948.1\|1617127_1617817_+	hypothetical protein	A0A1W6JTE1	Pseudomonas_phage	7.2e-16	31.3
WP_043204880.1\|1617978_1618557_+	hypothetical protein	NA	NA	NA	NA
WP_144417383.1\|1618642_1620571_+\|terminase	phage terminase large subunit family protein	G8EXZ6	Synechococcus_phage	2.4e-141	47.1
WP_052739282.1\|1620612_1620849_+\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA
WP_043204878.1\|1620845_1622501_+\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	1.9e-91	35.1
WP_006495264.1\|1622522_1623419_+	S49 family peptidase	G8DCP1	Silicibacter_phage	3.7e-44	54.7
WP_006495263.1\|1623440_1624028_+	hypothetical protein	NA	NA	NA	NA
WP_043204876.1\|1624055_1624469_+\|head	head decoration protein	NA	NA	NA	NA
WP_006495261.1\|1624541_1625588_+\|capsid	major capsid protein	A0A0C5ABI0	Bacteriophage	3.2e-31	28.6
WP_006495260.1\|1625596_1625833_+	hypothetical protein	NA	NA	NA	NA
WP_006495259.1\|1625836_1626181_+	hypothetical protein	NA	NA	NA	NA
WP_006495258.1\|1626173_1626776_+	hypothetical protein	NA	NA	NA	NA
WP_006495257.1\|1626788_1626968_+	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_006495256.1\|1626964_1628455_+\|tail	phage tail sheath subtilisin-like domain-containing protein	U5P0H3	Shigella_phage	4.0e-104	43.9
WP_006495255.1\|1628524_1628899_+\|tail	phage tail tube protein	NA	NA	NA	NA
WP_006495254.1\|1628902_1629463_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_144417364.1\|1629522_1629630_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_006495253.1\|1629626_1631051_+	DNA circularization N-terminal domain-containing protein	U5P4I0	Shigella_phage	5.5e-26	26.9
WP_006495252.1\|1631067_1632717_+	hypothetical protein	NA	NA	NA	NA
WP_043204874.1\|1632716_1633859_+	hypothetical protein	M1FN92	Enterobacteria_phage	6.8e-27	29.1
WP_006495251.1\|1633903_1634422_+\|plate	phage baseplate assembly protein	Q8HAB9	Salmonella_phage	6.8e-27	40.5
WP_006495250.1\|1634425_1634872_+	phage GP46 family protein	A0A2P9JZK5	Alteromonadaceae_phage	3.7e-21	39.1
WP_006495249.1\|1634873_1636037_+\|plate	baseplate J/gp47 family protein	A0A192Y6E4	Salmonella_phage	2.1e-23	28.6
WP_043204872.1\|1636043_1636640_+	DUF2313 domain-containing protein	NA	NA	NA	NA
WP_043204920.1\|1637488_1638190_+	hypothetical protein	A9YX14	Burkholderia_phage	2.1e-55	55.1
WP_043204919.1\|1638422_1639283_+	hypothetical protein	NA	NA	NA	NA
WP_006495243.1\|1639433_1639616_+	hypothetical protein	NA	NA	NA	NA
WP_029227429.1\|1639608_1640106_+	lysozyme	Q3HQU9	Burkholderia_phage	1.3e-83	93.3
WP_006495240.1\|1640102_1640648_+	hypothetical protein	NA	NA	NA	NA
1640542:1640557	attL	NA	NA	NA	NA
WP_043204868.1\|1640644_1641124_+	DUF2514 family protein	Q6J1Q4	Burkholderia_virus	4.1e-50	71.6
WP_080346052.1\|1641235_1641613_-	reverse transcriptase N-terminal domain-containing protein	A0A0U4J920	Pseudomonas_phage	1.3e-19	59.3
WP_043204867.1\|1642256_1643336_-\|integrase	tyrosine-type recombinase/integrase	I6NSG1	Burkholderia_phage	2.7e-110	55.2
WP_080346053.1\|1643456_1644497_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_158380835.1\|1644822_1645197_-	hypothetical protein	NA	NA	NA	NA
WP_006495234.1\|1645617_1646133_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_006484172.1\|1646216_1646681_-	hypothetical protein	NA	NA	NA	NA
WP_006495233.1\|1646982_1647378_+	hypothetical protein	NA	NA	NA	NA
WP_080346054.1\|1647406_1647757_-	hypothetical protein	NA	NA	NA	NA
WP_043204865.1\|1648151_1648895_-	DUF695 domain-containing protein	NA	NA	NA	NA
1647998:1648013	attR	NA	NA	NA	NA
WP_006484174.1\|1649078_1649387_+	hypothetical protein	NA	NA	NA	NA
WP_052739275.1\|1649715_1649913_+	hypothetical protein	NA	NA	NA	NA
WP_006484195.1\|1650073_1650547_+	VOC family protein	A0A2K9L1J4	Tupanvirus	2.4e-18	37.6
WP_006495229.1\|1650628_1651600_-	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	2.3e-12	30.2
WP_006484186.1\|1651867_1652086_+	hypothetical protein	NA	NA	NA	NA
WP_034201824.1\|1652246_1652870_-	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	2.4e-18	35.0
WP_006495227.1\|1653213_1653702_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_006484216.1\|1653889_1654327_+	PaaI family thioesterase	NA	NA	NA	NA
WP_006495225.1\|1654475_1655528_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA
WP_006495224.1\|1655605_1656892_-	MFS transporter	Q6JIH2	Burkholderia_virus	1.5e-86	43.4
WP_006495223.1\|1656927_1658349_-	M20 family metallopeptidase	NA	NA	NA	NA
WP_006495222.1\|1658511_1659465_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_006495221.1\|1659529_1660660_+\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA

DBSCAN-SWA_6

2597753 : 2651772

uncultured_Caudovirales_phage(33.33%)

plate,protease,head,tail,capsid,portal,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_144417375.1\|2597753_2598284_+	hypothetical protein	Q8W6R9	Burkholderia_virus	1.0e-30	45.1
WP_144417376.1\|2598314_2599031_-	immunity 52 family protein	A4PE26	Ralstonia_virus	1.8e-22	36.1
WP_043205582.1\|2599043_2599655_-	hypothetical protein	NA	NA	NA	NA
WP_158380837.1\|2599716_2600028_+	hypothetical protein	NA	NA	NA	NA
WP_043205584.1\|2600002_2600500_-	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_158380839.1\|2600506_2600938_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_006497086.1\|2601109_2601895_-	DNA adenine methylase	Q8W6S4	Burkholderia_virus	1.4e-132	82.4
WP_046337628.1\|2602172_2602814_-	hypothetical protein	NA	NA	NA	NA
WP_006497088.1\|2602816_2603383_-	N-acetylmuramidase	A0A0E3JI96	Rhodoferax_phage	2.0e-51	53.7
WP_006497089.1\|2603379_2603829_-	hypothetical protein	A0A0S0N2E7	Pseudomonas_phage	4.2e-17	35.9
WP_006497090.1\|2603905_2604955_-	phage late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	4.7e-83	47.2
WP_006497091.1\|2604964_2605171_-\|tail	tail protein X	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.4e-15	61.2
WP_006497092.1\|2605145_2606024_-\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	3.0e-35	37.9
WP_006497093.1\|2606034_2608476_-\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	5.1e-56	37.6
WP_006497094.1\|2608556_2608859_-\|tail	phage tail assembly protein	A0A1B2LRV6	Wolbachia_phage	3.9e-06	37.7
WP_006497095.1\|2608956_2609460_-\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	1.1e-42	53.1
WP_006497096.1\|2609470_2610640_-\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	2.1e-156	71.6
WP_006497097.1\|2610724_2611504_-\|tail	tail assembly chaperone	E5E3Q6	Burkholderia_phage	7.3e-57	56.5
WP_006497098.1\|2611519_2613538_-\|tail	tail fiber protein	A4JWS9	Burkholderia_virus	1.1e-104	51.8
WP_006497099.1\|2613525_2614104_-\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	2.5e-30	45.4
WP_043205585.1\|2614093_2614990_-\|plate	baseplate J/gp47 family protein	A0A1J0I2M3	Salmonella_phage	1.4e-48	40.8
WP_006497102.1\|2614986_2615322_-	GPW/gp25 family protein	A0A2H4JA09	uncultured_Caudovirales_phage	2.5e-22	48.1
WP_006497103.1\|2615321_2615522_-	hypothetical protein	NA	NA	NA	NA
WP_043205587.1\|2615581_2616262_-\|plate	phage baseplate assembly protein V	A0A1B2LRU5	Wolbachia_phage	3.8e-17	29.1
WP_006497106.1\|2616265_2616790_-	hypothetical protein	Q75QM3	Wolbachia_phage	8.4e-25	42.0
WP_043205589.1\|2616779_2617310_-\|tail	phage tail protein	A0A2H4JBV1	uncultured_Caudovirales_phage	5.4e-11	31.0
WP_006497108.1\|2617312_2617600_-	hypothetical protein	NA	NA	NA	NA
WP_006497110.1\|2617601_2618597_-\|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	9.5e-118	62.7
WP_006497111.1\|2618670_2619015_-\|head	head decoration protein	NA	NA	NA	NA
WP_006497112.1\|2619045_2620113_-\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	1.4e-50	37.6
WP_043205590.1\|2620109_2621603_-\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	2.9e-134	51.6
WP_006497114.1\|2621599_2621806_-	hypothetical protein	NA	NA	NA	NA
WP_006497115.1\|2621819_2623805_-\|terminase	phage terminase large subunit family protein	A0A2D1GMT1	Marinobacter_phage	1.9e-178	53.8
WP_006497116.1\|2623767_2624337_-	hypothetical protein	NA	NA	NA	NA
WP_006497118.1\|2624869_2625643_-	hypothetical protein	NA	NA	NA	NA
WP_006497119.1\|2625863_2628371_-	virulence protein E	A0A2D1GN57	Marinobacter_phage	3.4e-95	40.2
WP_043205594.1\|2628631_2629015_-	hypothetical protein	NA	NA	NA	NA
WP_006497122.1\|2629001_2629544_-	hypothetical protein	C7BGG0	Burkholderia_phage	2.2e-28	46.2
WP_043205599.1\|2629932_2630361_+	transcriptional regulator	A0A0P0J076	Acinetobacter_phage	4.5e-16	64.4
WP_006497124.1\|2630817_2631036_+	hypothetical protein	NA	NA	NA	NA
WP_043205601.1\|2631085_2631448_+	hypothetical protein	NA	NA	NA	NA
WP_006497126.1\|2631447_2632746_+	hypothetical protein	NA	NA	NA	NA
WP_043205638.1\|2632847_2633207_+	hypothetical protein	NA	NA	NA	NA
WP_043205602.1\|2633199_2633577_+	hypothetical protein	NA	NA	NA	NA
WP_043205604.1\|2633573_2633807_+	hypothetical protein	NA	NA	NA	NA
WP_043205606.1\|2633859_2634813_+	DNA (cytosine-5-)-methyltransferase	Q7Y4B5	Escherichia_virus	7.9e-122	66.1
WP_043205607.1\|2634858_2635869_-	hypothetical protein	NA	NA	NA	NA
WP_043205609.1\|2635858_2636998_-	ParB N-terminal domain-containing protein	Q858T2	Yersinia_virus	4.2e-93	56.0
WP_144417377.1\|2639968_2641168_+	hypothetical protein	NA	NA	NA	NA
WP_043205612.1\|2642134_2642974_-	hypothetical protein	NA	NA	NA	NA
WP_043205614.1\|2643125_2643716_+	recombinase family protein	A0A219Y9V9	Aeromonas_phage	3.3e-25	40.7
WP_043205615.1\|2643916_2645011_-	DUF4238 domain-containing protein	NA	NA	NA	NA
WP_006497137.1\|2645382_2646372_+	hypothetical protein	NA	NA	NA	NA
WP_006497138.1\|2646885_2647602_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_006487655.1\|2647708_2648005_-	4Fe-4S binding protein	NA	NA	NA	NA
WP_006487637.1\|2648007_2648316_-	hypothetical protein	NA	NA	NA	NA
WP_006487651.1\|2648328_2648910_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_006487649.1\|2649385_2649718_+	hypothetical protein	NA	NA	NA	NA
WP_006497140.1\|2649770_2650511_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_006487662.1\|2650626_2651250_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_006497142.1\|2651271_2651772_-\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_HG938371

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_HG938371_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_HG938371_1

1261285-1261393

Orphan

Consensus_repeat	Method
CCTTGCGGCGGCCCGGCGGAGGCTGA	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_HG938371_1

>merge|NZ_HG938371|1|1261285-1261393|CRISPRCasFinder
CCTTGCGGCGGCCCGGCGGAGGCTGAGATGAAACGACCCCCACGCTCACTTTGTTCGCTGCCCCCCGCGGGGGCGGTCAGCCTCCTTGGGGCGGCCCGGCGGAGGCTGA

>NZ_HG938371|1|1|1261285-1261393|CRISPRCasFinder
CCTTGCGGCGGCCCGGCGGAGGCTGA	GATGAAACGACCCCCACGCTCACTTTGTTCGCTGCCCCCCGCGGGGGCGGTCAGCCT
CCTTGGGGCGGCCCGGCGGAGGCTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_HG938371.1\|WP_006495058.1\|1256032_1257658_-\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_HG938371.1\|WP_012493271.1\|1251193_1253053_-\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|237104
NZ_HG938371.1\|WP_006495051.1\|1265916_1266558_+\|maleylacetoacetate-isomerase	unknown	unknown	gnl\|CDD\|273527
NZ_HG938371.1\|WP_006495052.1\|1264052_1265096_+\|gentisate-1,2-dioxygenase	unknown	unknown	gnl\|CDD\|131325
NZ_HG938371.1\|WP_006484863.1\|1257883_1258804_-\|dihydrodipicolinate-synthase-family-protein	unknown	unknown	gnl\|CDD\|188630
NZ_HG938371.1\|WP_006495055.1\|1261394_1261628_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|379229
NZ_HG938371.1\|WP_006495059.1\|1254371_1255964_-\|aldehyde-dehydrogenase-(NADP(+))	unknown	unknown	gnl\|CDD\|143447
NZ_HG938371.1\|WP_006488722.1\|1265183_1265882_+\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_HG938371.1\|WP_006495054.1\|1261624_1262893_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223523
NZ_HG938371.1\|WP_006488721.1\|1266590_1267799_+\|3-hydroxybenzoate-6-monooxygenase	unknown	unknown	gnl\|CDD\|181262
NZ_HG938371.1\|WP_006495060.1\|1253356_1254379_-\|Ldh-family-oxidoreductase	unknown	unknown	gnl\|CDD\|224966
NZ_HG938371.1\|WP_006495050.1\|1267879_1269241_+\|aromatic-acid/H+-symport-family-MFS-transporter	unknown	unknown	gnl\|CDD\|273327
NZ_HG938371.1\|WP_006488725.1\|1269340_1269691_+\|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|197713
NZ_HG938371.1\|WP_006495063.1\|1249736_1250174_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237864
NZ_HG938371.1\|WP_006495057.1\|1259055_1259988_+\|4-hydroxyproline-epimerase	unknown	unknown	gnl\|CDD\|172473
NZ_HG938371.1\|WP_006495062.1\|1250207_1251071_+\|peptide-binding-protein	unknown	unknown	gnl\|CDD\|227324
NZ_HG938371.1\|WP_006484701.1\|1247912_1249439_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274108
NZ_HG938371.1\|WP_006495053.1\|1262943_1263888_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|274127
NZ_HG938371.1\|WP_006495056.1\|1259984_1261112_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_HG938371.1\|WP_006495049.1\|1269680_1270115_+\|YeeE/YedE-family-protein	unknown	unknown	gnl\|CDD\|225264

Protein	Function_ID	Function_description	E-value
NZ_HG938371.1\|WP_006495058.1\|1256032_1257658_-\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	3.15749e-51
NZ_HG938371.1\|WP_012493271.1\|1251193_1253053_-\|dihydroxy-acid-dehydratase	gnl\|CDD\|237104	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional.	0
NZ_HG938371.1\|WP_006495051.1\|1265916_1266558_+\|maleylacetoacetate-isomerase	gnl\|CDD\|273527	TIGR01262, Maleylacetoacetate_isomerase, maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism. [Energy metabolism, Amino acids and amines].	1.07893e-94
NZ_HG938371.1\|WP_006495052.1\|1264052_1265096_+\|gentisate-1,2-dioxygenase	gnl\|CDD\|131325	TIGR02272, gentisate_12-dioxygenase, gentisate 1,2-dioxygenase. This family consists of gentisate 1,2-dioxygenases. This ring-opening enzyme acts in salicylate degradation that goes via gentisate rather than via catechol. It converts gentisate to maleylpyruvate. Some putative gentisate 1,2-dioxygenases are excluded by a relatively high trusted cutoff score because they are too closely related to known examples of 1-hydroxy-2-naphthoate dioxygenase. Therefore some homologs may be bona fide gentisate 1,2-dioxygenases even if they score below the given cutoffs.	0
NZ_HG938371.1\|WP_006484863.1\|1257883_1258804_-\|dihydrodipicolinate-synthase-family-protein	gnl\|CDD\|188630	cd00408, DHDPS-like, Dihydrodipicolinate synthase family. Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stabilizes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.	1.76599e-97
NZ_HG938371.1\|WP_006495055.1\|1261394_1261628_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|379229	pfam13510, Fer2_4, 2Fe-2S iron-sulfur cluster binding domain. The 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This cluster appears within sarcosine oxidase proteins.	2.27805e-17
NZ_HG938371.1\|WP_006495059.1\|1254371_1255964_-\|aldehyde-dehydrogenase-(NADP(+))	gnl\|CDD\|143447	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.	0
NZ_HG938371.1\|WP_006488722.1\|1265183_1265882_+\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	2.23284e-96
NZ_HG938371.1\|WP_006495054.1\|1261624_1262893_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|223523	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only].	4.28125e-24
NZ_HG938371.1\|WP_006488721.1\|1266590_1267799_+\|3-hydroxybenzoate-6-monooxygenase	gnl\|CDD\|181262	PRK08163, PRK08163, 3-hydroxybenzoate 6-monooxygenase.	0
NZ_HG938371.1\|WP_006495060.1\|1253356_1254379_-\|Ldh-family-oxidoreductase	gnl\|CDD\|224966	COG2055, COG2055, Malate/L-lactate dehydrogenases [Energy production and conversion].	7.98248e-130
NZ_HG938371.1\|WP_006495050.1\|1267879_1269241_+\|aromatic-acid/H+-symport-family-MFS-transporter	gnl\|CDD\|273327	TIGR00895, transport_protein, benzoate transport. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.4005e-107
NZ_HG938371.1\|WP_006488725.1\|1269340_1269691_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197713	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor.	2.07261e-17
NZ_HG938371.1\|WP_006495063.1\|1249736_1250174_+\|hypothetical-protein	gnl\|CDD\|237864	PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional.	5.79268e-05
NZ_HG938371.1\|WP_006495057.1\|1259055_1259988_+\|4-hydroxyproline-epimerase	gnl\|CDD\|172473	PRK13970, PRK13970, 4-hydroxyproline epimerase.	0
NZ_HG938371.1\|WP_006495062.1\|1250207_1251071_+\|peptide-binding-protein	gnl\|CDD\|227324	COG4991, COG4991, Uncharacterized protein with a bacterial SH3 domain homologue [Function unknown].	1.17804e-19
NZ_HG938371.1\|WP_006484701.1\|1247912_1249439_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274108	TIGR02393, RNA_polymerase_sigma_factor_RpoD, RNA polymerase sigma factor RpoD, C-terminal domain. This model represents the well-conserved C-terminal region of the major, essential sigma factor of most bacteria. Members of this clade show considerable variability in domain architecture and molecular weight, as well as in nomenclature: RpoD in E. coli and other Proteobacteria, SigA in Bacillus subtilis and many other Gram-positive bacteria, HrdB in Streptomyces, MysA in Mycobacterium smegmatis, etc. [Transcription, Transcription factors].	2.3011e-88
NZ_HG938371.1\|WP_006495053.1\|1262943_1263888_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|274127	TIGR02424, TF_pcaQ, pca operon transcription factor PcaQ. Members of this family are LysR-family transcription factors associated with operons for catabolism of protocatechuate. Members occur only in Proteobacteria. [Energy metabolism, Other, Regulatory functions, DNA interactions].	6.97922e-48
NZ_HG938371.1\|WP_006495056.1\|1259984_1261112_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	4.85089e-52
NZ_HG938371.1\|WP_006495049.1\|1269680_1270115_+\|YeeE/YedE-family-protein	gnl\|CDD\|225264	COG2391, COG2391, Predicted transporter component [General function prediction only].	4.33527e-11

>NZ_HG938371.1|WP_006495056.1|1259984_1261112_+|FAD-binding-oxidoreductase
MSETKTDVVVIGAGIVGAACAHELAQRGLRVLVVDDASGGATGAGMGHLVAMDDNAAELALSHYSIELWRALSGEMPDGCAYRNCGTLWLAADAHEMDLARAKQATLAAHGVAGELIDAAALAQLEPMLRAGLGGALKIPGDAILYAPVTANWLLQRAPRVTVRRERAVAVDGPSVTLASGDVLRAERVVVANGVAARTLLPELPLRPKKGHLLITDRYPGHVSHQLVELGYAASAHASDGTSVAFNVQPRPTGQLLIGSSRQFDTEDAQVEPPVLARMLRRAVGYLPALADLNGIRAWTGFRSASPDGLPLLGEHPARPGVWLAVGHEGLGVTTAPGSARLVAALMAGERPPIEIEPYLPGRFLTASPVAGALT
>NZ_HG938371.1|WP_006495057.1|1259055_1259988_+|4-hydroxyproline-epimerase
MKRIQIIDSHTGGEPTRLVVSGFPSLGDGTMAERRDVLAREHDRYRTACILEPRGSDVLVGALLCDPVAPDAAAGVIFFNNSGYLGMCGHGTIGVVRTLHHMGRIAPGVHRIETPVGTVEATLHDDLSVSVRNVPAYRHAQGVALDVPGYGPVKGDIAWGGNWFFLISDHGQRVAGDNVAALTAYASAVREGLERAGITGANGGEIDHIELFADDPEHDSRSFVLCPGLAYDRSPCGTGTSAKLACLAADGKLAPGAVWRQASVIGSVFHASYEWADGGIVPTIRGSAHLSAEATLLIEEDDPFGWGIGS
>NZ_HG938371.1|WP_006484863.1|1257883_1258804_-|dihydrodipicolinate-synthase-family-protein
MSRNAIQWTGVFPAVSTQFKPDFSLDIDATHRVVKNLVNDGVSGLVVCGTVGENTSLSTSEKLQVIEAARDAAGGKIPVIAGIAEFTTEFARNTVREAQRVGVDGVMVMPALVYSAKPHETAAHFRAVATSTDLPVMVYNNPPIYKNDVTPDVLIALQDCENIVCFKDSSGDTRRFIDLRNAVGDRFVLFAGLDDVVVESIAVGAEGWVSGMSNAFPKEGETLFRLAKQKRFDEALALYRWFMPLLHLDARPDLVQCIKLCEELVGRGSAITRPPRLALQGDTLAEVKAIVAKALETRPALPDVGL
>NZ_HG938371.1|WP_006495058.1|1256032_1257658_-|APC-family-permease
MPGQGNAHPSVPLSRSAHPGAGHRKFKKQLSLTDLTFIGLGAIFGSGWLFAASHVSTIAGPAGIFSWLLGGFAVLLLGIVYCELGAALPRAGGVVRYPVFSHGPLLGYLMGFITLIAFSSLIAIEVVAARQYAAAWFPGLTVEGSSDPTTLGWLVQAALLCFFFYLNYSSVKTFAKANNIISIFKFIVPLSVIAVLFTFFKPANLTVHGFAPFGMPGIEMAVSAGGIIFAYLGLTPIVSVASEVRNPQRTIPIALILSILLSTLIYVLLQLAFIGSIPTAMLAAGWHDVSKAFSLPYRDIALALGVGWLAVMVVADAMISPSGCGNIYMNATPRVVYGWAKTGTFFKVFTRVDEASGIPRAGLWLTFGLAIFWTLPFPSWEALINIVSAALVLSYAVAPVSVAALRRTAPDLPRPFRASAFGLTGPASFVIAALIVYWSGWSTVSWLLGLQIVMFAIYLACRRWVPTAHLSLAEQVRSSAWLIAFYAAMIVLSYLGGFGGTGRLAHPYDTVVVAAVALVIYYWGAHTGVRADKLQLDDDED
>NZ_HG938371.1|WP_006495059.1|1254371_1255964_-|aldehyde-dehydrogenase-(NADP(+))
MQLTGQLLIGQSAVAGQNGTLHAIAAATGEPLEPAFGGASLHDLETACALADDAFDTYRETSLDARAAFLDAIGRHIMALGDDLIERCVVETGLPRARIEGERGRTVGQLALFASLVRDGGFLDARIDPARPERKPLPRVDLRLRNVAVGPVAVFGASNFPLAFSVAGGDTASALAAGCPVIVKAHSAHPGTSELVGRAIQRAARECGMPAGVFSLLFDASREIGQALVADPRIKAVGFTGSRRGGVALMHIAAARPEPIPVYAEMSSINPVLLCPAALDARHDAIAPQFVASLTLGAGQFCTNPGLVLAVDGPALRAFEAAAADAVRAVAAQTMLTPPIHASYAQGVAALRDHSAVALLAEGVEGGRHQARAALLATSADAFIAHPELRDEVFGPASLIVRCPDTDTLHRVLKSLEGQLTIAAHIADGDAALFAALRPTLERKAGRILVNGFGTGVEVGHAMVHGGPFPATSDTRTTSVGARAIERFLRPVSYQDVPDALLPDAIRSSNPLHVPQRIDGVPAPREVNHG
>NZ_HG938371.1|WP_006495060.1|1253356_1254379_-|Ldh-family-oxidoreductase
MADHTTEVVLSLDEVHALALRVLTHHGMSDAHARAIANVITQGQRDECHSHGVYRLLVCVRSLKKGKVDPQAVPTLRRLSSSIVAVDAHRGFSLLSFETGLPVLVEMAKQHGIAAMAINHCYHFSALWPEVEAIAAEGLVGIAMNPSHSWVAPEGGREPVFGTNPIAFAWPRPGGEPFVFDFATSAIARGDIELHAKQGKAIPSHWAIDADGQPTTDPKAALQGAMRTFGGHKGSALAAMVELLGGALIGDMTSRESMDFDEGVGATPCHGELVIAFDPKVFLGDELDTGLARGERMFESIVAQGARLPSQRRFDARARSIANGVRIPKPLYDEILTLLD
>NZ_HG938371.1|WP_012493271.1|1251193_1253053_-|dihydroxy-acid-dehydratase
MPTYRSKTSTAGRNMAGARSLWRATGMKDDDFSKPIIAVVNSFTQFVPGHVHLKDLGQLVAREIEAAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSRDIIADSVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPVIFVSGGPMEAGKTRLANPVTKTVELKKLDLVDAMVIAADQSYSDADVAEVERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADREQLFKRAGRRIVELTRQHYEQDDERVLPRSVGFKAFENAMTLDIAMGGSTNTILHLLAIAQEAGIDFTMKDIDRLSRTVPQLCKVAPNTNKYHIEDVHRAGGIMAILGELERAGKLHTDVPTVHAPTLKDALDQWDIVLTQDDAVRTFYLAGPAGIPTQVAFSQNTRWPSLDLDRAEGCIRSYEHAFSKEGGLAVLTGNIALDGCVVKTAGVDESILVFEGSAHVTESQDEAVENILNDKVKAGDVVIVRYEGPKGGPGMQEMLYPTSYIKSKGLGKACALLTDGRFSGGTSGLSIGHCSPEAAAGGAIGLVRDGDRIRIDIPNRTIDVLVSDEELARRREEQNAKGWKPAQPRPRKVSAALKAYAKLVMSADKGAVRDLSLLDD
>NZ_HG938371.1|WP_006495062.1|1250207_1251071_+|peptide-binding-protein
MRNTIVRSLCVVLAGLAAAPGVADAQSSAYTNSPAELFAGPAPDYPVVAQIPPGTALDVFGCLSDYTWCDVALPGVRGWIDAQLLDYPYQGSYVPLLEYGAIIGVPVTGFAIGAYWDRYYRHRPWYPDRDRWAHRAEPRLGPGGMPPAQGRPQPGAPLQVAPGGSPPVHDTRPSATRGGWNGANRVPPPAAPTPAPTPMPGGMGNARPASPAAPTPMPGGAGNARPANPPPAVLHPSPAPGGEGRTMPQPARQGGWGGGGYARPQGGGNGGGNHGGGGGGGPDELRH
>NZ_HG938371.1|WP_006495063.1|1249736_1250174_+|hypothetical-protein
MNPISAARPAVVALAALALGGCYYTSPYGYAPYYAPVPATVTQREIPAAPTAPGPAASTVPQAEVDVGPAVPVYVAPAYVPPPYPYAYPAYYSGWYGPPVTIGFWGRWGGGYWGGRGGYWHRPWGGGHWGGGHWGGGHWGGGHRH
>NZ_HG938371.1|WP_006484701.1|1247912_1249439_-|sigma-70-family-RNA-polymerase-sigma-factor
MTTPRPTPRADTPLDPIIQLLALAGEQGYLTHADLVDALPPESDSPDALDVVRAALADIGIAVLDEPAVPAPFAGAAPVEVDRDALDEGRAMLGDLARGTSASTDPLALYMRRMHAVPLLTREGEIVLAREIETGRHQVLHAIAGYPPAVDALLERHRATGTTGSPDDDDADAPVPARYDTLQAAASALREAVHAHGTRSAEYRDARNHVAALLGSLAWVAPAVDDASRVVRALAAAPHDPSAGDAACFDAVARRALAAALSDGQQKVRDATRAMLEANLRLVLSIARKYLNRGVDLSDLVQDGCLGLMRAIEKFEYRRGFKFSTYATWWIRQAIARAVADRSRTIRVPVHVGDQYQRVQRHALRFRQRTGRRATPAELAAETGLAEDKLRAVLALPAEPVSLDTPLPDADTGLVELIEDQASASPFEQLADTRMRDCVRSLLRSVTPTEADVLRRRFGLGGAEPDTYDAIAQDAGMSRERVRQIEKRALAALRTAAEAENAQSFLDA
>NZ_HG938371.1|WP_006495055.1|1261394_1261628_+|(2Fe-2S)-binding-protein
MIIHLDGRALTVADGATVAAAVAASGDDMTRVSCTGATRAPFCGMGICQECRMTIDGRRRLACQTLCRDGMQVERTR
>NZ_HG938371.1|WP_006495054.1|1261624_1262893_+|NAD(P)/FAD-dependent-oxidoreductase
MNQERLSVDVAIVGAGPAGLSAARAAARSGATVAIVDDNPRAGGQIWRQPAASAPTPAAAERLAVLRQPNVTHLAATRIVAETQPGTLLLEDDERGLLLDFRTLILCCGARELLLPFPGWTLPGVTGAGGLQALIKYGLDVRGQRTVIAGSGPLLLASAATARQAGARVSHVLEQAAWGDVAGFGAGLWRWPSKLAQAAKLVTAAYRPAAYVVEAFGDQRLERVRIRQGDREFDVDCDRLACGFGLVPNTVLPRHLGCRIEHGAVAVDAHQRTSRDGYFAAGECTGGGGSELAMVEGEIAGYAATGQTARLAARVARRAHWQAFAEAVRERFAIREPIRRLARPDTLLCRCEDVRFDAVAREPGWTAAKLQSRCGMGACQGRVCGAAAQTLFGWTPPAPRTPLVPARVGTLMFDGTGPCDSA
>NZ_HG938371.1|WP_006495053.1|1262943_1263888_-|LysR-family-transcriptional-regulator
MDWTHRLRLRHLQVLLSLAGTGNLSQSAVALATTQPALSKWLKELEEDVGLPLFERHARGLRPTPYGEALIEHARRVEAQLDIARDDMAALREGGSGLVTIGTSGVAAADTVPFAVSQLLKRMPRAQVRLTESTMNQLMPQLARSELDIVVGRSGSTSVDPLLHAEALYVDPVVFVARPDHALAGATSLGWDDVLAYPWIVWPAGTPVHNALEAALHAAGRVQPPHCVESNSSILNLTLLNNTDLLGVASHRAARRFAQLNAIRILPMELEGQGAVSMYWHPDSANRAAVAATIECLRACAAPQVGGWEKVKVE
>NZ_HG938371.1|WP_006495052.1|1264052_1265096_+|gentisate-1,2-dioxygenase
MTTHPDATRAAYYARIAEQRLAPLWESLHNLVPTSPQPAAQAAIWKYAQIRDLVMQAGSVISAEEAVRRVLVLENPGLPGKSSMTPSLYAGLQLILPGEIAPSHRHTQSALRFIVEGRGAWTAVNGERTTMHPGDFIITPSWAWHDHGNPSVEDGGEPVVWLDGLDIPLLAHLDAGFAENFPEAVQPVNRPEGDSFARFGHNMVPVRHRVSDPTSPVFSYPYARSREALDALYRNGELDAWDGVKLRYVNPATGGWPMPTIATFMQFLPAGFDGRTYRSTDATIYCVVEGSGAALIGDRAFAFAPHDIFVAPSWAPVRLSASSDSVLFSYSDRPVLSALNLLREARD
>NZ_HG938371.1|WP_006488722.1|1265183_1265882_+|fumarylacetoacetate-hydrolase-family-protein
MTFVFPPEAPVALPVAGSDARFAVRRVYCVGRNYAAHAREMGFDPDREPPFFFCKPADSIVPVAYGETLDLAYPSQTQNYHYEAELVAVIGKGGSDIPLERALDHVWGYAVGLDMTRRDLQMKMREMGRPWEIGKAFDRSAPLGPVHRASDVGHVEQGGLWLTVNGATRQKSDVSHLIWSVAETVADLSKFFRLEPGDVIFTGTPEGVGPVVAGDVMKVGVERLGELTVRVV
>NZ_HG938371.1|WP_006495051.1|1265916_1266558_+|maleylacetoacetate-isomerase
MQLHSFFNSSTSYRVRIALALKGLPYDTLPVNIRTGEHRDADYIAQVNPSAAVPALTDGDFRLGQSLAILDYLDQIQPTPRLIPLEPRRRARVLELAALIACDIHPVNNLRVLRYLDSELKVTPQQKSAWYRHWVAEGMAGVERLLARANAGPWCFGDAPTLADVCLVPQVANALRMDCDLSAYPRCLAVVEHARHEPAFEAAQPQRQPDYVA
>NZ_HG938371.1|WP_006488721.1|1266590_1267799_+|3-hydroxybenzoate-6-monooxygenase
MGETINDGRRVLVIGGGIGGLATALALARQGIRVKLLEQAERIGEIGAGIQLAANAFNALDALGVGEAARGRAVLTDWLQLMDAIDAREVARIDTGAAYRDRFGNPYAVIHRADIHLSIYEAVKDHPLIEFRTSTQVCGFEQDGNGVTVIDQHGERYRADAVIGCDGVKSAIRQALIGDAHRVTGHVVYRAVVEVDNMPKDLQINAPVVWAGPHCHLVHYPLRGGRQYNLVVTFHSREQETWGVRDGSKEEVLSYFDGIHPLPKQMLDRPTSWKRWATADRDPVERWSAGRATVLGDAAHPMTQYIAQGACQALEDAVTLGAAVAQTDGDFEAAFALYERVRIPRTARVLYSAREMGRIYHAKGVERQVRNGLWVGRTDAQFYDALDWLHGWRAEDCLKTAA
>NZ_HG938371.1|WP_006495050.1|1267879_1269241_+|aromatic-acid/H+-symport-family-MFS-transporter
MADTLSIDVSEWIDRHRIAPFQAAIVVLCFLIVAIDGFDTASIGFIAPVIRAEWGLSPARLAPVFGAGLAGLMAGALVFGPFGDRFGRKRLLLACVACFGIASAASASAGSLTELIVWRFVTGLGLGGAMPNAITLTSEYCPARRRSLLVTTMFCGFTIGSALGGLAAASLIEHHGWRAVLVVGGAAPLLLLPLLAWRLPESVRYLVNQGAPSARIATMLGRIAPDPHLAHASFIAPAGKPAGSPLGRLFAADLLRGTLLLWLTFFMSLLVIYLLSSWLPTLLRTTGATLQTAARVTAMFQVGGTLGAIILGWLMDRFDPHRVLACSYAAAGACVAAIGVFAASPWGAALAVFAAGFCVSGSQVGANALSAAFYPTECRTTGVSWANGIGRGGSVVGSMAGGAMLAMGVPLSTAFAVVAAPCVIAALAVLALGVVRAGVVRAAAADGMAGRQA
>NZ_HG938371.1|WP_006488725.1|1269340_1269691_+|helix-turn-helix-transcriptional-regulator
MNDDLPAGLPAPDQMRAAAESACALLKVMSNPDRLLLLCELSQGECCVSDLEARLDIHQPTLSQQLGVLRDNALVRTRREGKTIRYSLDSPAVVAVMGVLYEQFCGATAKEARDAG
>NZ_HG938371.1|WP_006495049.1|1269680_1270115_+|YeeE/YedE-family-protein
MQVDALHFTPWLSLAGGVLIGLAAAWLVAFNGRIAGISGIVGGLLTAGGAERGWRVAFIAGMIVAPVAMHVAGSSLTPRIDAGWPELLAAGLLVGIGTRYAGGCTSGHGVWGMSRGALRSVVATATFMVAGFATVFVRLHVAGG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_HG938370

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_HG938371

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection