CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_LN906634	Lactobacillus reuteri, complete genome, strain ATCC 53608	1 crisprs	csa3,cas14j,cas3,DinG,DEDDh	0	0	12
NZ_LN906636	Lactobacillus reuteri plasmid p53608_2, complete genome, strain ATCC 53608	1 crisprs	NA	0	2	0
NZ_LN906635	Lactobacillus reuteri plasmid p53608_1, complete genome, strain ATCC 53608	2 crisprs	NA	1	2	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LN906634_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN906634_1

893116-893231

TypeV

Consensus_repeat	Method
AATACTTCTACAAGTGAATCAACAACTAGTAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN906634_1

>merge|NZ_LN906634|1|893116-893231|CRISPRCasFinder
AGTACATCGACTAGTCAATCGAATACTTCTACAAGTGAATCAACAACTAGTACCTCAAATGTTAGTTCTGGTTCAACATCAAGTAGTACCTCAACCAGCGAATCAAATACTTCTAC

>NZ_LN906634|1|1|893116-893231|CRISPRCasFinder
AGTACATCGACTAGTCAATCGAATACTTCTAC	AAGTGAATCAACAACTAGTACCTCAAATGTTAGTTCTGGTTCAACATCAAGT
AGTACCTCAACCAGCGAATCAAATACTTCTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN906634.1\|WP_003675577.1\|889463_891002_+\|accessory-Sec-system-glycosyltransferase-GtfA	unknown	unknown	gnl\|CDD\|131964
NZ_LN906634.1\|WP_003675575.1\|890994_892320_+\|accessory-Sec-system-glycosylation-chaperone-GtfB	unknown	unknown	gnl\|CDD\|274351
NZ_LN906634.1\|WP_003667025.1\|898299_899703_-\|C69-family-dipeptidase	unknown	unknown	gnl\|CDD\|335383
NZ_LN906634.1\|WP_003675585.1\|883196_884708_+\|accessory-Sec-system-protein-Asp1	unknown	unknown	gnl\|CDD\|274740
NZ_LN906634.1\|WP_003675579.1\|887100_889449_+\|accessory-Sec-system-translocase-SecA2	unknown	unknown	gnl\|CDD\|163426
NZ_LN906634.1\|WP_035162235.1\|902073_903576_+\|glycerol-kinase-GlpK	unknown	unknown	gnl\|CDD\|234594
NZ_LN906634.1\|WP_003676751.1\|903620_904133_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906634.1\|WP_003675572.1\|893451_895155_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|380149
NZ_LN906634.1\|WP_079376089.1\|895273_895900_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|366760
NZ_LN906634.1\|WP_016496411.1\|896687_897611_-\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_LN906634.1\|WP_003675593.1\|869587_871255_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|132187
NZ_LN906634.1\|WP_003675581.1\|886209_887097_+\|accessory-Sec-system-protein-Asp3	unknown	unknown	gnl\|CDD\|379726
NZ_LN906634.1\|WP_003663508.1\|901753_901939_+\|4-oxalocrotonate-tautomerase	unknown	unknown	gnl\|CDD\|235013
NZ_LN906634.1\|WP_003676754.1\|899841_901671_+\|potassium-transporter	unknown	unknown	gnl\|CDD\|366411
NZ_LN906634.1\|WP_035161832.1\|880976_881984_+\|sugar-transferase	unknown	unknown	gnl\|CDD\|236626
NZ_LN906634.1\|WP_003675583.1\|884719_886207_+\|accessory-Sec-system-protein-Asp2	unknown	unknown	gnl\|CDD\|274739
NZ_LN906634.1\|WP_085954340.1\|897680_898181_-\|transposase	unknown	unknown	gnl\|CDD\|226950
NZ_LN906634.1\|WP_003675586.1\|882003_883194_+\|accessory-Sec-system-protein-translocase-subunit-SecY2	unknown	unknown	gnl\|CDD\|131966
NZ_LN906634.1\|WP_016496748.1\|892312_892510_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906634.1\|WP_016496813.1\|904199_905576_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853

Protein	Function_ID	Function_description	E-value
NZ_LN906634.1\|WP_003663508.1\|901753_901939_+\|4-oxalocrotonate-tautomerase	gnl\|CDD\|235013	PRK02220, PRK02220, 4-oxalocrotonate tautomerase; Provisional.	5.59469e-28
NZ_LN906634.1\|WP_003675575.1\|890994_892320_+\|accessory-Sec-system-glycosylation-chaperone-GtfB	gnl\|CDD\|274351	TIGR02919, conserved_hypothetical_protein, accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. [Protein fate, Protein modification and repair].	7.02235e-171
NZ_LN906634.1\|WP_003667025.1\|898299_899703_-\|C69-family-dipeptidase	gnl\|CDD\|335383	pfam03577, Peptidase_C69, Peptidase family C69.	1.43893e-158
NZ_LN906634.1\|WP_003675585.1\|883196_884708_+\|accessory-Sec-system-protein-Asp1	gnl\|CDD\|274740	TIGR03713, acc_sec_asp1, accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	7.75815e-102
NZ_LN906634.1\|WP_003675579.1\|887100_889449_+\|accessory-Sec-system-translocase-SecA2	gnl\|CDD\|163426	TIGR03714, Protein_translocase_subunit_SecA_2, accessory Sec system translocase SecA2. Members of this protein family are homologous to SecA and part of the accessory Sec system. This system, including both five core proteins for export and a variable number of proteins for glycosylation, operates in certain Gram-positive pathogens for the maturation and delivery of serine-rich glycoproteins such as the cell surface glycoprotein GspB in Streptococcus gordonii. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_LN906634.1\|WP_035162235.1\|902073_903576_+\|glycerol-kinase-GlpK	gnl\|CDD\|234594	PRK00047, glpK, glycerol kinase GlpK.	0
NZ_LN906634.1\|WP_003675572.1\|893451_895155_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|380149	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.	1.32497e-14
NZ_LN906634.1\|WP_035161832.1\|880976_881984_+\|sugar-transferase	gnl\|CDD\|236626	PRK09814, PRK09814, sugar transferase.	1.68866e-122
NZ_LN906634.1\|WP_016496411.1\|896687_897611_-\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.49744e-75
NZ_LN906634.1\|WP_003675593.1\|869587_871255_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|132187	TIGR03143, AhpF_homolog, putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).	0
NZ_LN906634.1\|WP_003675581.1\|886209_887097_+\|accessory-Sec-system-protein-Asp3	gnl\|CDD\|379726	pfam15432, Sec-ASP3, Accessory Sec secretory system ASP3. Sec-ASP3 is family of bacterial proteins involved in the Sec secretory system. The family forms part of the accessory SecA2/SecY2 system specifically required to export GspB, a serine-rich repeat cell-wall glycoprotein adhesin encoded upstream in the same operon.	1.34717e-37
NZ_LN906634.1\|WP_003676754.1\|899841_901671_+\|potassium-transporter	gnl\|CDD\|366411	pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family. Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family.	5.29561e-47
NZ_LN906634.1\|WP_079376089.1\|895273_895900_-\|ATP-binding-protein	gnl\|CDD\|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	1.01443e-65
NZ_LN906634.1\|WP_003675583.1\|884719_886207_+\|accessory-Sec-system-protein-Asp2	gnl\|CDD\|274739	TIGR03712, acc_sec_asp2, accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	4.47412e-146
NZ_LN906634.1\|WP_085954340.1\|897680_898181_-\|transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.38675e-14
NZ_LN906634.1\|WP_003675586.1\|882003_883194_+\|accessory-Sec-system-protein-translocase-subunit-SecY2	gnl\|CDD\|131966	TIGR02920, preprotein_translocase_SecY_family_protein, accessory Sec system translocase SecY2. Members of this family are restricted to the Firmicutes lineage (low-GC Gram-positive bacteria) and appear to be paralogous to, and much more divergent than, the preprotein translocase SecY. Members include the SecY2 protein of the accessory Sec system in Streptococcus gordonii, involved in export of the highly glycosylated platelet-binding protein GspB. [Protein fate, Protein and peptide secretion and trafficking].	1.42199e-71
NZ_LN906634.1\|WP_003675577.1\|889463_891002_+\|accessory-Sec-system-glycosyltransferase-GtfA	gnl\|CDD\|131964	TIGR02918, lipopolysaccharide_biosynthesis_protein, accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. [Protein fate, Protein modification and repair].	0
NZ_LN906634.1\|WP_016496813.1\|904199_905576_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.71623e-43

>NZ_LN906634.1|WP_016496748.1|892312_892510_+|hypothetical-protein
MNKKEDHDQPQSLIQQDALKRLEKVEEEKRQPYKKKKEPINFRSVLMTLLLILVVGMMLIGYFIR
>NZ_LN906634.1|WP_003675575.1|890994_892320_+|accessory-Sec-system-glycosylation-chaperone-GtfB
MLNLFDNFDQASFDFLRSQRTAQIKIPTVVINDDGFLPPEVESPIKYWGNYNVNKKPLYFDHLSLPRYWRILSTAAQGHIYDLDKKRADIIYQATDNTRQVKEVRWLNNNGKVSWIDHYNRYGYRFAQTYYRNEQPAWRKYYDKKNRVFLEWNLIAGDFFLDVDGGYHFPSLIELVKYYLQTRHFKLDHIFYNTLNQGLSVSLNLPADGSDTLFWHEPLSGDELPGNMKFLMENSTRTKHIIFQRYTDWQRIGANLKNNHVDFGFLGTIYPHPRANQLRPQALILTNSDEIVELSTLIKNLPNIKFHIAAVTEMSGKLLAYQQYENVELYPNVSSARVKQLIADCDIYLDINRQNEILDAVRGAFEQNMLIVGFDETLHEPQFVTPQNMFKVNEAQKMSKHIMAALLKPALMKELIDTQRQLASEVSVQDYQRMIGALQSE
>NZ_LN906634.1|WP_003675577.1|889463_891002_+|accessory-Sec-system-glycosyltransferase-GtfA
MTVYNINLGIGWASSGVEYAQSYRAQAFRNLNISAKFVFSDLILGNNIADLTANLGFNADQIIWLYNFFTDIKIAPSTFLLDTFVEQNHLEQRNFSLLPNNGTKELQYKSEEEKLTIVPRYNNREKQTIDQVTYIFNNRLIKRDFYSYTKYATEYYSGEEKDNQVIFREFYNENGTIAYTQHLDGDGHELFEFPDQNYYSKTDLYREMLRKFNFKADDIIILDRMDEDKQLVNGQLIFEHHLPAKLVIPVHADHYDKHYTNDHQVLWNNFYEYQFMHYQDVAAYVVATDRQRDLLASQQKHFNHAKPQINTIPVGSLEHLVKPKGTRKKHSLITASRLANEKHIDWVIEATVAAHKIVSDLTLDIYGEGGERSRLQNLITKNNADSYIKLMGQHDLKDVYQKYETYIAGSTSEGFGLSLMEAVGSGLSMIGFDVPYGNQTFIVDQQNGYLLPYTEDWSNSRKEQLLADAIVKNFTEADLTSFHEKSYSLAESYLTKNVAKQWQQLIGELQHA
>NZ_LN906634.1|WP_003675579.1|887100_889449_+|accessory-Sec-system-translocase-SecA2
MTYPNFRLQKVKHTLAKVNALTAEMRGMSDEELKHQTVLLKKELANGKTVDDILPRAFATIREADYRILGMFPYDVQVMGAIVLNQGNIAEMKTGEGKTLTATMPLYLNALTGKGAMLLTPNGYLAQRDKEQLQPVYEWLGLTVSLGFTNSDQKPLPQVKREWYNSDIVYTTASSLAFDYLFNNLATRIDDQYLRPFNYVIIDEVDAILLDEATSPFVVSSTPMVQSNLYRLTDDFIHTLQPEIDYKLNEDRTAVWLTLHGIRQAQRFFRITDLFTNRYREVYRHIILALRAHFIMENGHDYLVSEGKVVLLDEANGRLKRGVKVSTGLHQAIEAKEQVDLTPNQQVAASITFPSLFGLFNKIAGMSGTVKSDEQEFFEVYKMRVIQIPTRKKVIRRDYPEQIYLTTRQKLIHALDETIELHKAGRPVLLVAGSVENSEIISELLLDQGIPHNVLNAFNVAREADIVKDAGQRGAVTVATNMAGRGTDIKLGAGVKELGGLAVIGTEMLPTRVKLQLAGRAGRQGDPGSSKFYISLEDSYLAKNSTKRFKNYYRQLQKKKTDKQLRSPRLKMSIAMLNDRVAANQQMARSNVNKNEIALKIQRKYLYDRRDQLMRTAHLETEVGKWLSRGISLYLDKKVKWNALELRHLMNQHFTYDVVDLPDNLELDHKKIQKYLEKFCQKELEQKAKVLINSEQLNQFYRSALLNALDSSWTDQMAYLSKLSVIVQPWTTAQRNPKFMYQEKAYQAFEKMFDTVAKKVVDNLMLSTIRLNKDNNLIVHFN
>NZ_LN906634.1|WP_003675581.1|886209_887097_+|accessory-Sec-system-protein-Asp3
MQQFINQGYWESSNAYSAGSDIKINSDYSVLFHNSLMAPGKVIMSWNSVNSYQATKLVPQLPILRNNHKYRLSVNAKAAPIYSLIIRLTFFDAQEHEIDHVEFQQRSIEFVYPPEAVQYRLELINNGLTDLTFQRFEICDADLPVSVHEDVWFHEPINEDVKGKLNLLLIADNKRVRKTYPDLKKYEDYKMQPISVAWQSSADVVAILKQWLISNRIYDANVISTNPKLDQVVLELKMELSTINAVVTNQTDPQSQIADVIYPLLPPTTWSSPVLVNPDWPIIFSVIQEINSKEG
>NZ_LN906634.1|WP_003675583.1|884719_886207_+|accessory-Sec-system-protein-Asp2
MNVLQLGAQNWADKYKIPNEITWNYNTYPQAGIKRFDLVIITEGVQLEDNLWSKLQWQVPPYCVLYSPFAERDLNEAGLNFIKCQEARQIVEEPQELINQLPIRFFQGQSGIRFAPTKLLLNDPVGTFVDGGHLTLKIEADEWTNLGSYQQNVYIDPQRLLKFSLEYSQKSNIKVRLRVFVSPNGGDGNSKDQYLLDFSRNNEEQELPIGLEDAPRFASVSVEVLGKGKLTLGTLHARWSRRDYGEFLAGGKRLIAPVNGEDIPYYFNPGDLRPPLHVYFSGARGLEGFEAYPLFRRNHTPALLFTDPRLAMGQFYTGEAIESQIKDTIIVTLKKLGFDRQQLVLNGISMGTYPAIKLGAQLSPYAINVAKPTVNLGQVALRARLERPDEFDTIFDIDRQLVASLTSEQLEQLDMDFWNLMNQNDLTKTRIYVGYMKNDDYDNLAMKKMQENSAIQSAQLFVSKGFPGRHNDNRAVVQWFVSRLTEINNAFGRGE
>NZ_LN906634.1|WP_003675585.1|883196_884708_+|accessory-Sec-system-protein-Asp1
MDYLVPAWHELLEGWSYTIPKLEFDDAVSHIKVFQTNQKPFSLIITDYQPQLSTKLNQLTISPTQIFSTFDYLQGVHHVDSQIIDYRDFNWPTGAYYNFTNFRVIVMVKENPYAKVTFDTQGKILWVDYLEKDKISRRLLLDSRGFVSREELFENGQPYQYIYYDEQGYWRFKHDVKSDRVEINKRFSELTDYLHYEHLNDLLEEIITKYVLSKFDINQDNLIVTLDDQAVIDQKNYLPYQPIFSLSRWHRYHESLDELKSQELNLVADNNETKNNIKKQSNIDATIIPLFQSRFNLGHSQRSDQEQIGLFIESMTKDEVDKVLELLYQRLLKSPDAIALTVMSYSTEKLQQAQQALENLKQTHQGEFILASEEQNEVEEILTKQIGIPKLTIDTKRISTPAEAGRQLDSLRILIDWGNQLDEFLQISAISTGIPQIYRQPNSQIKNYQNGLICPQISDINKGLNYYLGNLKHWNEALIYNVQLMNQLSAAELQKKWEKVLTK
>NZ_LN906634.1|WP_003675586.1|882003_883194_+|accessory-Sec-system-protein-translocase-subunit-SecY2
MTQKIQLNNLLKRLGATFFILIIYILGCTISLPLVNISTTFRRVLANSSLGIMSFMSGGNLQRLSLFSVGLNPLMISMMIIQLLTMMRLFYFDTFSIKQTMRIQQWLTLIFAIIQSLALTLMLNLTTNLLTSLAVTLMLTAGSLFVVWLGNMNTRFGIGGTITIILFNIISGTLPNLLSSIGKIVGQSYGILWLALIVLASFGLLIFWISFNRAYYPIKMVDTMMSSHDKPIILPLGLNMGAMMTYMVGMSLLMIPTLLANILGPQSLFANPYFEIVLSGILAFALFYFFTFVQFDPKEQAKTMLHNNNYIIGIRPGEPTKKYLQHLVIHVSFFGALLNTIQLSFGLLGSRILGNFAGLAILPMNIIMIVMFMQGIKDQLLMLLFPLRYARLIKDE
>NZ_LN906634.1|WP_035161832.1|880976_881984_+|sugar-transferase
MTVHITNLYGQSFQSTAQIAQNQIAKIGRELGFNELGIYNYNWPDEPSVALDTRFDGIIASVSNNDTVIFQSPTWNSIEWDQAFIDHLAPYNVKKIIFIHDIIPLMFESNRYLLPQFIDYYNKADLIIAPSQPMVDFLRANGLTVEKVVLQHMWDHCASVDFTVTLQNTGVINFAGNLEKFQLVGHWHYPDNPLYAFAKVIDVEPTDNIKFMGWQSDPVLLSKLRHNGGFGLVWSNEPYCKNYMHLNANHKLSTYLAAGLPVIVNENIAESETILRKGLGIVADNLDEAIEKVQGMDDQSYNEMVQRVDDFARLIREGYFAKKALTEAVFKLYYQ
>NZ_LN906634.1|WP_003675593.1|869587_871255_+|FAD-dependent-oxidoreductase
MAEQHLYDLIIVGAGPAGLSAGLYAGRATLDTLILEGDTVGGQVTTTSVVYNYPAVEKVDGTQLMNQMQSQVASFGVEIQHDAVEKFDLTGEVKTLIGKSGQKYTARSVIIATGANPKKVGFPGENEFRGRGIAYCSTCDGELFTGLQVFVVGGGYAAAEEADYLSRFAKHVTVLVRGDHFACPVLTAKRALDNPKVSVEYNTEVKEVSGDDYLTTATLVNNKTGEETVYHVDDGDQTFGMFIYIGTQPATKALANILDLDDRGYIMTDENGKTNIDGVYAAGDVIHKNLRQIVTAASDGAVASTAAERYIIMQKEKQGIPIHAETNKKPAKTVGQTSELSQQENTTPHEGNWLPAEIDQQLQPIFARLTKDIKLQVLTNGTELSNQLVSFVEEFASLDQHLQMETKPAPADVKYLPQLRLLDADGNDTGLHYAGIPTGHELNSLVLGVYNVAGPGQTIAPEMVERIKKLAPTKIRIGVSLTCHFCPDVVAACQRMASLNAGITATMIDLQHFPELRKEKKIMSVPATMIDDDPVIFGSQSLEELVTAVEKHHQN
>NZ_LN906634.1|WP_003675572.1|893451_895155_+|LPXTG-cell-wall-anchor-domain-containing-protein
MSTSTASQAQSSTSTSTSTTNDLTASQTVAKARALTLRLFAALNTTVNTYGTPIISSDGLSVTYYGKGTDSVSNNPIYYIVKVTNNLNGTVSFTITYTLKDPITGEISAGPSSRSDVYHFGNSIYAKTATFNMGSGYSNGTLTSVVTLDANGNTVYNMTSGVHLYNTSGNSYDFYDLDAQGQGLTYQNINSSTRYNNYGKNKVISEQITVTFNYNESSSNLNYTIAPYVSYTSGLNEGNYFTNSVSGTEPSKSNSTSVSQSTSKQQSTSASRSTSNGQSVSTSKQVSQSNSQSISASQAASTSLSQSASKSASVSASESTSASVSASESTSASVSASESTSASLSSSESASSSASASASISSSLSTSASVSASISGSNSTSDSPVNPQPDNPSTSISDSESMSISTSESISVSASGSTSISDSGSTSLSASDSTSTSISGSSSNGSESTSGSQSPVTPFPDNSGSTSMSTNGSGNGSISLSLSITNSTNTSSLENTSASVTDKHMTVDLTAQNSVENGNANKPSQQNKKLPQTGNASQTTAELLGLMSLEAVLLLLIAKKKKHNEDK
>NZ_LN906634.1|WP_079376089.1|895273_895900_-|ATP-binding-protein
MNQYQKLVDKEIAYQQQKSLKRRIKRARFPIIKLLSDFDYQFQPSINQQQIAEFATMSFLDNQENIVFIGSPGVGKTHLSIGLGIEACRQDVRTLFINCHELILRLKAAQGKQHLERVMRRYERYDLLIIDELGYLPISAEEAKLLFQLINGRYERKSTIITTNVPLSSWGAVLHSTATAEAILDRLVYHSHVIKIKGKSYRLASVNS
>NZ_LN906634.1|WP_016496411.1|896687_897611_-|IS30-family-transposase
MGTTILSFQNRVVIETLHNEGRSLRYIANYLGFSKTTIFNELHRLNGEYQAELAQSDFERKVGQRGRKSSLTKNLKHLIEEKIQTQKWSPEQVAHVVGIAYKTVYNWIDQGLLDVQLPDLPDHGIRRHRAKEKRGTFSHGRSIEERPHKIETRQEFGHFEADTVLSGKRKGQAVATFVERKSRLTIVKRLHGRDSQSMTQAVLELASQLQDKLKTLTVDHGKEFANYQAIEQLTGTQVYFAHAYSPHERGSNENRNRVLRRFIPKGQAIEELSDYQLVQINWYLNSRPLKCLNWHTPIEIFLLNLRH
>NZ_LN906634.1|WP_085954340.1|897680_898181_-|transposase
MRKDVYERMRYFVAEKIKPNYSAIARQYGVDPRTVKTAYLRAQNGETIVRNQRKRRSKLDGFQDIIKDKYTAGCSARAIYDFIVEKGFTGKYTIVKDYCRHFRKAQTKKATIRVEHTMGLSAQVDWKEQVTMTDQNGVPHTFSIFLYVLPYSKFKFWQIVKFKLNI
>NZ_LN906634.1|WP_003667025.1|898299_899703_-|C69-family-dipeptidase
MGNKLTACTSILIGKDASIDGTIMIGRNEDAKAAWPKHMVVHQRGEMPNHFISKDTRLELDLPEESARYTATPEWTDKDGLFEEDGINEYDVAMSATESAYSNALVLGYDPLVENGLNEEAMITVVLPYVKTAREGVQRLGNLIAKYGTGETNGVLFADNDEAWYFETGAGHYWVAQRIPDDSYAVVANQLAIQEIDFNDSANFMFHPGIQEFVEKHDLNPDPSTFNFRKIFGTADRSDAIYSEPRVWAGHQMFSPRQATDETPESTELPFIMKPDHKLSIFDAQNYLSNHYEGTEFDPLGHGEHAHKYRPISLAKTQESHILQMNRPGANIHWLAMGVAAESTYVPFFNGITDTPAPYKRGKLPAQLNSAYWIFKHTSVLVDSHLHDFLPLLRDVQKERNAAAIKMIAETDRRLPSLKGEARAIFLTRQSDDYATDTLNAYKKLSLELITKMTDYCELNFNTDENL
>NZ_LN906634.1|WP_003676754.1|899841_901671_+|potassium-transporter
MQQLSLLIVMLAALIIPIIMARFKVSSIPTAIAEIITGIILGKSFLNIVNPNWTLNMMSSMGVIMLMFLSGMEINFDLFRKTPGKKRDSKSPVVMASQAFGLIIAAALIIAIVISRLGLFKDVLLATIIFSTVALGVVIATLKEKDILQKPVGQTILLTAVLGEVVPMLALTFYASINGGNARRLWLIVLLFLAAFILLRRFKQPYVWFNKISKSTTQLDVRLAFFLIFALVTIAETVGAENILGAFLAGMVMKLLQPSETTEDRLNSIGYGFLIPFFFIMTGDRLDLKNLFANHQALALIPILVIGFILAKLPTMIIYRRRFKLRNSFAGSFLVATTITLVLPTLEVARNLHAITQAQSAAFTLAAVIVCIIAPIAFNSTYKLEKADLIKQKVNFIGTNTLTVPISQQLYKNWYDVRMVTDNENNFKIYNSQVKHLEYMPKLDAESLEQGGYFDCDIIVVGFLNDHKSARLAQIAKEHGVKRVIASQNNPRLDPKDVSALREKGIEIFNSFNVQSSVLRALIESPLILRMLTDTEAGLYEATLLNSRYSGRELHTLPFVNKITISRIFRNRKPIDPHGDTVLEYGDHILFTGDRQAAEEVRENLQGRK
>NZ_LN906634.1|WP_003663508.1|901753_901939_+|4-oxalocrotonate-tautomerase
MPLVHIDLIEGRTDEQLKALVKDVTAAISKDANVPAERVHIVLNEMRKDRYSVAGKMVSDK
>NZ_LN906634.1|WP_035162235.1|902073_903576_+|glycerol-kinase-GlpK
MSEQQYIMAIDQGTTSSRAIIFDHDGNKVAISQQEFPQYFPQPGWVEHDPLEIWDSVQSVISNVMIKSQIKPYKIAAIGITNQRETTVIWDRHTGKPIYNAIVWQSKQTSDIAEQLIKDGYKEMIHQKTGLVIDSYFAATKIKWILDHVPGAREKAAKGDLMFGTIDTWLLWNLSGRRVHATDVTNASRTMLFNIHTLDWDQDILDLLGIPQSLLPEVKPSSAIYGYTGDYHFYGVQIPIAGIAGDQQAALFGQAAYDKGSIKNTYGTGAFIVMNTGLEPTLSDNGLLTTIAYGLDGQTHYALEGSIFVAGSAVQWLRDGLKMFNKASESEQMAVDAKTTGGVYVVPAFTGLGAPYWDQEVRGAMFGLTRGTERGHIIRATLEAIAYQTKDVVDTMVKDTQLPLTALTVNGGASRNNFMMQFQADILQTPIKRAAMEETTALGAAFLAGLAVDFWEDQDELRKLSRIGDQFDPQMDSQKAADLYRGWQRAIAAAQFYGRN
>NZ_LN906634.1|WP_003676751.1|903620_904133_+|hypothetical-protein
MREMKMKTPVQMTDDLARFIKENREDAAYPHESLYVDLLEQWKVLSRYQLEYADKESKRLYNAYWNSMARWYEVFNNERDNLLEPTALPSDELMDFYAGLIEDLMDHVLSLVPPSPHSTVIKLTDFRVLLSNELQKITQLDLGIQGPIDFAMIMDYWKMLGESFDREKIK
>NZ_LN906634.1|WP_016496813.1|904199_905576_+|IS3-family-transposase
MTKISVKTKLKAVEEYANGNVTLASVRHKYGIAEHDFQIWVGIYARFGKGPLLNPPKVTGDFRLNLVKWKQENLASISETCIHFGYRSPGSVYQWERLYNKQGPQALLRLRRGRKPKNGQTTRQESRQASSAPKTEPNLTKRKLIVKDTTRCLKKIDSLEKASKKELAQVIYDLKAKYLLKDLIDALPISMSTYQYWQNRFEHPDEDEEELKAVIKGLFNYYQAEYGVRRLSTQIRDYYRLIGKKTPNHKRIQRLMHEMGLKCIKYNRRVRKYDSSKGPNGKKAKNKLNRRFMSNRKYQKMVCDITELKAHDGRKVYLEIIKDLATNQLLTWSISQHPNLQFALDPLQQLLKQLPHTGYQLTLHTDQGWHYQHRAWRKLLRQGNIRQSMSHRATCLDNAACETVFSKLKAEIGPDTSYRNQEELSQAINEWIHFYNERRIQTKLGNQTPLQYEQNLVA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

213172 : 275280

Staphylococcus_phage(15.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003675310.1\|213172_214915_+\|transposase	IS1182 family transposase	A0A146ICT8	Staphylococcus_phage	1.5e-97	39.7
WP_003675307.1\|215005_215923_-	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_003675305.1\|216069_216990_+	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_003665044.1\|217008_217764_+	TerC family protein	S5MAL1	Bacillus_phage	2.4e-41	41.8
WP_003675303.1\|217765_218083_+	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	2.7e-18	37.8
WP_003675301.1\|218151_219474_-	MATE family efflux transporter	NA	NA	NA	NA
WP_003675299.1\|219828_223329_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_003675296.1\|223387_223720_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003675294.1\|223764_224328_-	membrane protein	NA	NA	NA	NA
WP_003669785.1\|224393_225158_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	5.9e-11	25.4
WP_003675292.1\|225150_226050_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_003675290.1\|226046_227042_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003675288.1\|227416_228442_-	C40 family peptidase	A0A1J0GW44	Streptomyces_phage	4.2e-12	44.9
WP_085954327.1\|228650_229616_-\|transposase	IS30 family transposase	H7BW47	unidentified_phage	8.6e-15	30.7
WP_003675286.1\|229890_231432_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	1.3e-44	25.9
WP_003675283.1\|231472_232252_+	putative ABC transporter permease	NA	NA	NA	NA
WP_003675281.1\|232328_232922_+	glycoside hydrolase family 73 protein	S5M633	Brevibacillus_phage	3.4e-30	49.0
WP_003675279.1\|232994_234380_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_003675277.1\|234735_235971_-	DUF2325 domain-containing protein	NA	NA	NA	NA
WP_035161691.1\|236106_237186_+	phosphoesterase	NA	NA	NA	NA
WP_003675274.1\|237225_237405_+	hypothetical protein	NA	NA	NA	NA
WP_003675272.1\|237592_237877_-	hypothetical protein	NA	NA	NA	NA
WP_035161689.1\|239159_240110_+	hypothetical protein	NA	NA	NA	NA
WP_003665009.1\|240140_240461_+	hypothetical protein	NA	NA	NA	NA
WP_003675266.1\|240466_241150_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_003675263.1\|241621_242002_-	DUF488 family protein	NA	NA	NA	NA
WP_003675261.1\|242061_242694_+	DNA-3-methyladenine glycosylase	NA	NA	NA	NA
WP_003675259.1\|242697_243843_+	AAA domain-containing protein	M4SNF8	Pseudoalteromonas_phage	4.0e-11	29.5
WP_003675257.1\|243839_245132_+	peptidase	NA	NA	NA	NA
WP_016496461.1\|245135_245429_+	hypothetical protein	NA	NA	NA	NA
WP_003675253.1\|245502_247407_+	peptidase M13	E3T4I7	Cafeteria_roenbergensis_virus	6.1e-73	30.6
WP_016496462.1\|247550_248189_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003675249.1\|248188_248692_+	O-acetyl-ADP-ribose deacetylase	A0A0K1L687	Scale_drop_disease_virus	2.5e-34	47.1
WP_003675246.1\|248792_249953_+	MFS transporter	NA	NA	NA	NA
WP_003675244.1\|250028_251522_+	cardiolipin synthase	NA	NA	NA	NA
WP_063164051.1\|252052_253183_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	7.1e-37	32.1
WP_085954328.1\|253197_254118_-	sensor histidine kinase	NA	NA	NA	NA
WP_080564811.1\|254110_254830_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.0e-21	32.0
WP_003675240.1\|254909_255752_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	8.7e-56	41.3
WP_003675238.1\|255945_256698_-	nicotinamide mononucleotide transporter	A0A2H4PB74	Lactobacillus_phage	4.7e-93	70.2
WP_035161682.1\|256948_257446_-	transcription elongation factor GreA	NA	NA	NA	NA
WP_003675234.1\|257552_258674_+	hypothetical protein	NA	NA	NA	NA
WP_003675232.1\|258696_259023_+	hypothetical protein	NA	NA	NA	NA
WP_003664967.1\|259079_259304_-	hypothetical protein	NA	NA	NA	NA
WP_003675230.1\|259317_259824_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_003675228.1\|259859_260642_-	tyrosine-protein phosphatase	NA	NA	NA	NA
WP_003675226.1\|260671_261640_-	SGNH/GDSL hydrolase family protein	A0A2H4PRU1	Lactococcus_phage	5.9e-32	31.9
WP_003675223.1\|261834_263013_+	galactokinase	NA	NA	NA	NA
WP_003675221.1\|263039_264491_+	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA
WP_003675220.1\|264528_265521_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	2.4e-12	23.9
WP_003675218.1\|265590_266202_-	DedA family protein	NA	NA	NA	NA
WP_003675216.1\|266451_267765_+	cation:dicarboxylase symporter family transporter	NA	NA	NA	NA
WP_003669853.1\|267819_268290_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_003669854.1\|268494_268959_+	universal stress protein	NA	NA	NA	NA
WP_016496478.1\|269037_269412_+	low temperature requirement protein LtrA	NA	NA	NA	NA
WP_072575277.1\|269424_270048_+	low temperature requirement protein LtrA	NA	NA	NA	NA
WP_072575373.1\|270131_270536_+\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	4.3e-45	61.4
WP_013923870.1\|270535_271711_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0ICY9	Lactobacillus_phage	3.5e-119	55.7
WP_003675214.1\|272181_274134_-	lactose permease	NA	NA	NA	NA
WP_016496411.1\|274356_275280_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.1e-33	31.7

DBSCAN-SWA_2

338418 : 402506

Streptococcus_phage(17.65%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072575284.1\|338418_338823_+\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	1.1e-45	63.1
WP_063164362.1\|338822_339998_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0ICY9	Lactobacillus_phage	2.5e-117	55.4
WP_003669961.1\|340504_340882_+	DUF4430 domain-containing protein	NA	NA	NA	NA
WP_003669962.1\|340887_341427_+	ECF transporter S component	NA	NA	NA	NA
WP_003675117.1\|341602_341788_+	hypothetical protein	NA	NA	NA	NA
WP_035161748.1\|342045_343068_-	D-2-hydroxyacid dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	2.4e-52	35.3
WP_003669968.1\|343263_343812_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003675111.1\|343808_345551_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.1e-40	26.6
WP_003675109.1\|345534_347364_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.2e-57	32.1
WP_003675107.1\|347436_349641_-	ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent	R9R4J2	Mycobacterium_phage	3.1e-84	32.6
WP_003675105.1\|349779_351216_-	C69 family dipeptidase	NA	NA	NA	NA
WP_003675102.1\|351303_351810_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_003675099.1\|351941_352673_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003675097.1\|352941_355353_+	phosphoketolase family protein	NA	NA	NA	NA
WP_013924000.1\|355589_357008_+\|transposase	ISLre2-like element ISLre2 family transposase	NA	NA	NA	NA
WP_003675095.1\|357108_358464_+	APC family permease	NA	NA	NA	NA
WP_003675093.1\|358498_359245_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003675091.1\|359378_360731_+	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_003675090.1\|360756_361659_+	ROK family protein	NA	NA	NA	NA
WP_085954329.1\|361813_363139_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	6.2e-48	31.0
WP_003675089.1\|363239_365168_-	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	D0R0F5	Streptococcus_phage	1.6e-68	30.9
WP_003664906.1\|365179_365647_-	universal stress protein	NA	NA	NA	NA
WP_003675087.1\|365847_366861_+	lipoate--protein ligase	A0A2H4UVX5	Bodo_saltans_virus	7.6e-14	31.4
WP_003669993.1\|367145_367553_+	hypothetical protein	NA	NA	NA	NA
WP_003669080.1\|367549_368008_+	hypothetical protein	NA	NA	NA	NA
WP_003664891.1\|368375_369545_-	MFS transporter	NA	NA	NA	NA
WP_003675084.1\|369699_371112_+	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_003675082.1\|371157_372144_+	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_003675081.1\|372198_373056_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_003664887.1\|373066_373480_-	helix-turn-helix transcriptional regulator	A0A1W6JNP1	Staphylococcus_phage	6.3e-07	48.6
WP_035161655.1\|373601_374582_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003664884.1\|374595_374952_+	DUF1304 domain-containing protein	NA	NA	NA	NA
WP_003675076.1\|374999_376961_-	sodium:proton antiporter	NA	NA	NA	NA
WP_003664882.1\|377204_377546_-	DUF4870 domain-containing protein	NA	NA	NA	NA
WP_003675074.1\|377587_378241_-	ABC transporter permease	NA	NA	NA	NA
WP_003675072.1\|378230_379613_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-12	32.5
WP_003675070.1\|379617_380178_-	ABC transporter permease	NA	NA	NA	NA
WP_003675068.1\|380443_381229_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_003669062.1\|381290_382046_-	glucose 1-dehydrogenase	A0A2P1ELN2	Moumouvirus	2.9e-10	29.4
WP_003675066.1\|382346_383309_-	nucleoside hydrolase	NA	NA	NA	NA
WP_003675063.1\|383474_384473_+	NAD(P)/FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	1.2e-19	28.0
WP_080564808.1\|384469_384649_+	zinc-ribbon domain-containing protein	NA	NA	NA	NA
WP_035161650.1\|384742_385540_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	7.8e-22	31.9
WP_003675059.1\|386436_386793_+	hypothetical protein	NA	NA	NA	NA
WP_035161647.1\|386892_387549_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_003675057.1\|387680_389033_+	APC family permease	NA	NA	NA	NA
WP_003675056.1\|389160_389628_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
WP_035161645.1\|389770_392434_-	HAD-IC family P-type ATPase	M1I547	Acanthocystis_turfacea_Chlorella_virus	2.5e-64	28.6
WP_003675052.1\|392669_393581_-	proline-specific peptidase family protein	NA	NA	NA	NA
WP_003675050.1\|393670_396073_-	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA
WP_003664847.1\|396212_397304_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.2e-36	43.1
WP_003669044.1\|397303_398110_+	ABC transporter permease	NA	NA	NA	NA
WP_003669043.1\|398109_398928_+	ABC transporter permease	NA	NA	NA	NA
WP_003675047.1\|398924_399998_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003675046.1\|400110_401403_+	hypothetical protein	NA	NA	NA	NA
WP_016496411.1\|401582_402506_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.1e-33	31.7

DBSCAN-SWA_3

427715 : 464645

unidentified_phage(30.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072575088.1\|427715_429092_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	2.1e-38	35.2
WP_003675009.1\|429352_430591_+	OFA family MFS transporter	NA	NA	NA	NA
WP_003675008.1\|430661_431534_+	RNA methyltransferase	NA	NA	NA	NA
WP_003675006.1\|431969_432638_+	Firmicu-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_016496524.1\|432627_432939_+	hypothetical protein	NA	NA	NA	NA
WP_016497145.1\|432935_433901_-\|transposase	IS30 family transposase	H7BW47	unidentified_phage	1.9e-14	30.7
WP_016496526.1\|434303_434918_+	hypothetical protein	NA	NA	NA	NA
WP_003664768.1\|434941_435637_+\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_003664767.1\|436024_436501_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_003675003.1\|436616_437480_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003675002.1\|437787_438480_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	2.3e-14	30.9
WP_003675000.1\|439378_440560_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_003674998.1\|440816_441374_+	elongation factor P	NA	NA	NA	NA
WP_003674997.1\|442700_443411_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.0e-12	37.2
WP_080564807.1\|443503_444409_+	phosphate ABC transporter substrate-binding protein	E3SII0	Synechococcus_phage	1.0e-09	26.3
WP_003674993.1\|444413_445313_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_003674990.1\|445312_446194_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_003674988.1\|446204_446960_+	phosphate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.8e-15	29.6
WP_003674987.1\|446970_447675_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_003674985.1\|448845_449709_+	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_003674983.1\|449851_451165_+	glycosyltransferase family 2 protein	A0A1V0S9E5	Catovirus	3.9e-10	28.3
WP_003674981.1\|451179_452319_+	beta-glucanase	NA	NA	NA	NA
WP_003674979.1\|452315_453077_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA
WP_003674977.1\|453154_454927_-	oleate hydratase	NA	NA	NA	NA
WP_003674975.1\|455081_456425_+	Trk family potassium uptake protein	NA	NA	NA	NA
WP_003664702.1\|456417_457086_+	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_003674974.1\|457103_457649_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_003674971.1\|457916_459221_-	divalent metal cation transporter	NA	NA	NA	NA
WP_003664689.1\|459223_460156_-	ferrochelatase	NA	NA	NA	NA
WP_003674969.1\|460542_461457_+	cysteine synthase family protein	A0A1X9I5K7	Streptococcus_phage	4.4e-61	41.8
WP_003674965.1\|461795_462191_+	flavodoxin family protein	NA	NA	NA	NA
WP_085954331.1\|462251_463382_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	7.1e-37	32.1
WP_016496411.1\|463721_464645_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.1e-33	31.7

DBSCAN-SWA_4

656687 : 693311

Streptococcus_phage(37.5%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085954338.1\|656687_657656_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_003674732.1\|658290_659436_+	hypothetical protein	NA	NA	NA	NA
WP_003674731.1\|659534_661412_+	hypothetical protein	NA	NA	NA	NA
WP_003674728.1\|661471_662590_+	AI-2E family transporter	NA	NA	NA	NA
WP_003674726.1\|662632_664102_-	transcriptional regulator	NA	NA	NA	NA
WP_003674724.1\|664311_665031_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_003674722.1\|665043_666501_+	hypothetical protein	NA	NA	NA	NA
WP_003668625.1\|666633_668211_+	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	6.3e-31	26.1
WP_013923736.1\|668276_669407_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	7.1e-37	32.1
WP_085954335.1\|669625_670594_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_003674720.1\|670713_671160_-	hypothetical protein	NA	NA	NA	NA
WP_003674718.1\|671370_671571_+	cold-shock protein	Q9AZD3	Lactococcus_phage	2.4e-20	71.4
WP_079376440.1\|671716_673042_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	8.1e-48	31.0
WP_003664355.1\|673255_673639_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_080564804.1\|673616_674483_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-20	31.6
WP_003674713.1\|674482_675169_+	hypothetical protein	NA	NA	NA	NA
WP_016496665.1\|675227_675953_-	MucBP domain-containing protein	NA	NA	NA	NA
WP_003674710.1\|676102_676711_+	ECF transporter S component	NA	NA	NA	NA
WP_003674708.1\|676762_678967_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	6.7e-124	41.3
WP_003674706.1\|679242_679428_+	hypothetical protein	NA	NA	NA	NA
WP_003664342.1\|679549_679816_+	phosphocarrier protein HPr	NA	NA	NA	NA
WP_003674704.1\|679815_681546_+	phosphoenolpyruvate--protein phosphotransferase	A0A1V0SGR7	Hokovirus	2.9e-13	26.5
WP_003674701.1\|681779_682997_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_016496666.1\|682999_684028_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_003674698.1\|684027_685041_+	flippase-like domain-containing protein	NA	NA	NA	NA
WP_003664336.1\|685097_685346_+	YkuJ family protein	NA	NA	NA	NA
WP_063164188.1\|691985_693311_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	4.7e-48	31.0

DBSCAN-SWA_5

853896 : 908609

Streptococcus_phage(27.27%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003663813.1\|853896_854655_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_003675627.1\|854665_856096_+	amino acid permease	NA	NA	NA	NA
WP_003675625.1\|856218_856578_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_003675622.1\|857185_857410_-	hypothetical protein	NA	NA	NA	NA
WP_035161845.1\|857559_857892_+	DNA-binding protein	M5AWB2	Nitratiruptor_phage	3.8e-15	42.2
WP_003675618.1\|857894_858722_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	1.4e-98	63.0
WP_003675615.1\|858773_859253_-	hypothetical protein	NA	NA	NA	NA
WP_085954339.1\|859553_860930_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	2.1e-38	35.2
WP_003675613.1\|860998_861979_-	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_003675611.1\|862059_862959_+	prenyltransferase	NA	NA	NA	NA
WP_003675609.1\|862994_863696_-	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	A0A1X9I6N4	Streptococcus_phage	1.0e-04	33.3
WP_003675607.1\|863716_864952_-	MFS transporter	NA	NA	NA	NA
WP_003675605.1\|865070_865949_+	metallophosphoesterase family protein	NA	NA	NA	NA
WP_003667006.1\|866094_866364_+	30S ribosomal protein S14	NA	NA	NA	NA
WP_003675603.1\|866594_867059_+	hypothetical protein	NA	NA	NA	NA
WP_003675601.1\|867058_867286_+	hypothetical protein	NA	NA	NA	NA
WP_003675599.1\|867356_868019_+	serine dehydratase	NA	NA	NA	NA
WP_003675597.1\|868028_868910_+	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	NA	NA	NA	NA
WP_003675595.1\|869010_869574_+	peroxiredoxin	NA	NA	NA	NA
WP_003675593.1\|869587_871255_+	FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	1.0e-55	37.5
WP_035161832.1\|880976_881984_+	sugar transferase	NA	NA	NA	NA
WP_003675586.1\|882003_883194_+	accessory Sec system protein translocase subunit SecY2	NA	NA	NA	NA
WP_003675585.1\|883196_884708_+	accessory Sec system protein Asp1	NA	NA	NA	NA
WP_003675583.1\|884719_886207_+	accessory Sec system protein Asp2	NA	NA	NA	NA
WP_003675581.1\|886209_887097_+	accessory Sec system protein Asp3	NA	NA	NA	NA
WP_003675579.1\|887100_889449_+	accessory Sec system translocase SecA2	NA	NA	NA	NA
WP_003675577.1\|889463_891002_+	accessory Sec system glycosyltransferase GtfA	NA	NA	NA	NA
WP_003675575.1\|890994_892320_+	accessory Sec system glycosylation chaperone GtfB	NA	NA	NA	NA
WP_016496748.1\|892312_892510_+	hypothetical protein	NA	NA	NA	NA
WP_003675573.1\|892767_893316_+	serine-rich glycoprotein adhesin	NA	NA	NA	NA
WP_003675572.1\|893451_895155_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_079376089.1\|895273_895900_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	2.6e-49	50.0
WP_016496411.1\|896687_897611_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.1e-33	31.7
WP_085954340.1\|897680_898181_-\|transposase	transposase	A0A059NT83	Lactococcus_phage	1.9e-29	45.5
WP_003667025.1\|898299_899703_-	C69 family dipeptidase	NA	NA	NA	NA
WP_003676754.1\|899841_901671_+	potassium transporter	NA	NA	NA	NA
WP_003663508.1\|901753_901939_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_035162235.1\|902073_903576_+	glycerol kinase GlpK	NA	NA	NA	NA
WP_003676751.1\|903620_904133_+	hypothetical protein	NA	NA	NA	NA
WP_016496813.1\|904199_905576_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	2.1e-38	35.2
WP_035161225.1\|905663_905900_-	hypothetical protein	NA	NA	NA	NA
WP_035161227.1\|905909_906485_-	RNA polymerase sigma24 factor	NA	NA	NA	NA
WP_035161230.1\|906677_906920_+	hypothetical protein	NA	NA	NA	NA
WP_085954361.1\|907029_907434_+\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	3.3e-45	61.4
WP_085954341.1\|907433_908609_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0ICY9	Lactobacillus_phage	1.3e-118	55.7

DBSCAN-SWA_6

923840 : 968492

Lactococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013923983.1\|923840_925052_+\|transposase	IS21 family transposase	A0A059NT83	Lactococcus_phage	8.3e-92	45.9
WP_003671670.1\|925056_925815_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.9e-62	48.2
WP_072575217.1\|926466_927204_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.6e-53	46.7
WP_003676711.1\|927440_928481_+	dTDP-glucose 4,6-dehydratase	H9NC62	Sphingomonas_phage	4.7e-51	37.5
WP_085954344.1\|928830_929799_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_085954345.1\|929886_931005_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.4e-37	32.1
WP_003676707.1\|931800_932733_+	homocysteine S-methyltransferase	NA	NA	NA	NA
WP_003676705.1\|932725_934129_+	amino acid permease	NA	NA	NA	NA
WP_003676700.1\|934584_934959_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_003663560.1\|934958_935201_-	hypothetical protein	NA	NA	NA	NA
WP_003676697.1\|935382_937230_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_003676696.1\|937294_940780_+	DEAD/DEAH box helicase	A0A0P0YMN2	Yellowstone_lake_phycodnavirus	8.7e-41	28.0
WP_003676694.1\|940875_941652_+	hypothetical protein	NA	NA	NA	NA
WP_035162211.1\|941638_941848_+	hypothetical protein	A0A0A1ERA5	Lactobacillus_phage	8.0e-11	52.7
WP_003676691.1\|942000_943119_+	exonuclease SbcCD subunit D	A0A059T8H2	Listeria_phage	1.1e-10	24.8
WP_003676688.1\|943120_946222_+	SMC family ATPase	NA	NA	NA	NA
WP_085954346.1\|946679_947648_-\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_003676686.1\|947801_948257_+	hypothetical protein	NA	NA	NA	NA
WP_035162210.1\|948285_948777_+	hypothetical protein	NA	NA	NA	NA
WP_016496806.1\|954622_955264_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_003673972.1\|955406_957713_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA
WP_003673974.1\|957870_959130_+	chloride channel protein	NA	NA	NA	NA
WP_035161361.1\|959314_959962_-	thiamine phosphate synthase	NA	NA	NA	NA
WP_003673976.1\|959958_960777_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_003673979.1\|961859_962165_+	hypothetical protein	NA	NA	NA	NA
WP_003673982.1\|962165_964067_+	hypothetical protein	NA	NA	NA	NA
WP_013923736.1\|964215_965346_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	7.1e-37	32.1
WP_003673983.1\|965980_966418_-	hypothetical protein	NA	NA	NA	NA
WP_003673985.1\|966433_967393_-	hypothetical protein	NA	NA	NA	NA
WP_003668074.1\|967523_968492_-\|transposase	IS30 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

1080959 : 1138865

Staphylococcus_phage(35.29%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003666171.1\|1080959_1081700_-\|holin	antiholin	NA	NA	NA	NA
WP_003666169.1\|1081692_1082112_-	CidA/LrgA family protein	NA	NA	NA	NA
WP_003674135.1\|1082313_1083045_-	response regulator	A0A2R2ZGH8	Clostridioides_phage	4.1e-09	24.0
WP_003674136.1\|1083025_1084789_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.7e-59	29.8
WP_003674137.1\|1084789_1085656_-	SPFH domain-containing protein	NA	NA	NA	NA
WP_003674138.1\|1085674_1087042_-	NOL1/NOP2/sun family putative RNA methylase	NA	NA	NA	NA
WP_003674139.1\|1087186_1087999_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_003666157.1\|1088056_1088293_-	cytochrome b5	NA	NA	NA	NA
WP_079376028.1\|1088397_1088592_-	hypothetical protein	NA	NA	NA	NA
WP_003674140.1\|1088760_1089432_+	response regulator transcription factor	NA	NA	NA	NA
WP_003674141.1\|1089625_1090516_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003674142.1\|1090532_1090865_-	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_003674143.1\|1090897_1092307_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_003674144.1\|1092299_1092761_-	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA
WP_003674145.1\|1092747_1093986_-	cysteine desulfurase	Q2XUY6	environmental_halophage	1.8e-105	45.4
WP_003674148.1\|1093966_1095256_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_003666143.1\|1095267_1096065_-	Fe-S cluster assembly ATPase SufC	A0A2R8FFL6	Cedratvirus	2.8e-11	26.4
WP_029507844.1\|1096288_1096495_+	ferrous iron transport protein A	NA	NA	NA	NA
WP_003674152.1\|1096496_1098488_+	ferrous iron transport protein B	NA	NA	NA	NA
WP_003667936.1\|1098494_1098653_+	FeoB-associated Cys-rich membrane protein	NA	NA	NA	NA
WP_003674154.1\|1098718_1100140_-	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	4.1e-74	34.4
WP_003667939.1\|1100154_1100976_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
WP_003674156.1\|1101008_1101383_+	PaaI family thioesterase	NA	NA	NA	NA
WP_003667942.1\|1101730_1102306_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_003667944.1\|1102510_1103695_-	MFS transporter	NA	NA	NA	NA
WP_003668074.1\|1103901_1104870_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_035161386.1\|1104942_1107831_+	YfhO family protein	NA	NA	NA	NA
WP_003674160.1\|1107904_1108630_+	potassium channel family protein	A0A1B0Y2S3	Lactobacillus_phage	1.9e-27	45.4
WP_003674162.1\|1108675_1109134_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	6.7e-26	41.3
WP_003674164.1\|1109136_1110318_-	GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	8.1e-92	47.4
WP_003674165.1\|1110317_1110920_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.8e-31	42.0
WP_035161389.1\|1110912_1111980_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	9.1e-42	33.1
WP_003674169.1\|1112316_1113261_-	pyrimidine-specific ribonucleoside hydrolase RihA	NA	NA	NA	NA
WP_063164097.1\|1113499_1114675_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0ICY9	Lactobacillus_phage	1.0e-118	55.4
WP_013923749.1\|1114674_1115079_-\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	8.7e-46	62.1
WP_003674173.1\|1115561_1117829_-	hypothetical protein	NA	NA	NA	NA
WP_003674176.1\|1118482_1121608_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	2.8e-67	29.4
WP_003674178.1\|1121661_1122774_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_003674180.1\|1122763_1124296_-	SAM-dependent DNA methyltransferase	A0A2H4PQP4	Staphylococcus_phage	7.4e-53	30.3
WP_003674182.1\|1124313_1126077_-	DUF262 domain-containing protein	U3PFK3	Vibrio_phage	1.3e-05	35.3
WP_003674184.1\|1126274_1126766_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_003666104.1\|1126826_1127102_-	hypothetical protein	NA	NA	NA	NA
WP_003667978.1\|1127298_1127529_+	hypothetical protein	NA	NA	NA	NA
WP_063164380.1\|1127619_1128588_-\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_003674186.1\|1128747_1129059_+	hypothetical protein	NA	NA	NA	NA
WP_003674189.1\|1129105_1129639_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003674191.1\|1129867_1131397_+	gluconokinase	NA	NA	NA	NA
WP_035161396.1\|1131409_1132750_+	gluconate permease	NA	NA	NA	NA
WP_050802152.1\|1132832_1133852_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	2.8e-16	26.3
WP_003674196.1\|1133903_1135433_+	gluconokinase	NA	NA	NA	NA
WP_035161399.1\|1135612_1136158_+	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA
WP_003666092.1\|1136172_1136364_+	hypothetical protein	NA	NA	NA	NA
WP_003674201.1\|1136381_1136765_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_003668066.1\|1137448_1137628_-	hypothetical protein	NA	NA	NA	NA
WP_085954347.1\|1137707_1138865_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.8e-34	31.2

DBSCAN-SWA_8

1156125 : 1164190

Staphylococcus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003674232.1\|1156125_1156968_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	6.1e-17	34.1
WP_003666062.1\|1157146_1157791_+	hemolysin III family protein	NA	NA	NA	NA
WP_003674233.1\|1157779_1158268_-	dihydrofolate reductase	A0A1B2IBQ4	Erwinia_phage	7.4e-23	40.8
WP_003668102.1\|1158283_1159246_-	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	2.5e-115	61.2
WP_003674235.1\|1159264_1161175_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	4.7e-57	30.6
WP_003674237.1\|1161176_1162388_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	9.0e-46	49.5
WP_003674239.1\|1162513_1163779_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_003666054.1\|1163914_1164190_-	HU family DNA-binding protein	A0A0H3UZA0	Geobacillus_virus	2.6e-25	68.5

DBSCAN-SWA_9

1464844 : 1522997

unidentified_phage(20.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003676127.1\|1464844_1465690_+\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	7.2e-18	29.9
WP_003676130.1\|1465795_1466641_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_016497008.1\|1466843_1467812_-\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_003676132.1\|1468154_1469291_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_003676134.1\|1469423_1469717_-	glycine cleavage system protein H	NA	NA	NA	NA
WP_003676135.1\|1469729_1470923_-	rod shape-determining protein RodA	NA	NA	NA	NA
WP_003666580.1\|1470971_1471196_-	DUF2969 domain-containing protein	NA	NA	NA	NA
WP_072575104.1\|1471219_1471456_-	membrane protein insertion efficiency factor YidD	NA	NA	NA	NA
WP_003666578.1\|1471461_1472454_-	rod shape-determining protein	NA	NA	NA	NA
WP_003676138.1\|1472560_1473877_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_003667560.1\|1473895_1474159_-	DUF1146 domain-containing protein	NA	NA	NA	NA
WP_003676140.1\|1474360_1474792_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_003666573.1\|1474803_1476231_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_003666570.1\|1476257_1477202_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_003666568.1\|1477237_1478767_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_016496411.1\|1478820_1479744_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.1e-33	31.7
WP_003667559.1\|1479857_1480400_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_003666564.1\|1480389_1480908_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_003666561.1\|1480950_1481169_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_003666558.1\|1481193_1481901_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_016497011.1\|1482214_1483486_-	uracil permease	Q9KX94	Enterobacteria_phage	2.8e-66	36.3
WP_003676146.1\|1483645_1484419_-	YibE/F family protein	NA	NA	NA	NA
WP_003676148.1\|1484415_1485531_-	YibE/F family protein	NA	NA	NA	NA
WP_003676150.1\|1485632_1487360_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_003676152.1\|1487491_1488127_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_003676154.1\|1488219_1489455_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	7.9e-98	53.8
WP_003676155.1\|1489568_1490597_-	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	1.2e-54	39.8
WP_003676157.1\|1490602_1491469_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_003667549.1\|1491461_1492550_-	peptide chain release factor 1	NA	NA	NA	NA
WP_003667548.1\|1492565_1493141_-	thymidine kinase	A0A249XZX5	Enterococcus_phage	1.3e-47	52.4
WP_003666538.1\|1493370_1494708_+	Mur ligase family protein	NA	NA	NA	NA
WP_003676161.1\|1494707_1495415_+	glutamine amidotransferase	NA	NA	NA	NA
WP_003667545.1\|1495430_1495733_+	hypothetical protein	NA	NA	NA	NA
WP_003676163.1\|1495797_1497204_-	amino acid permease	NA	NA	NA	NA
WP_003676165.1\|1497252_1498674_-	amino acid permease	NA	NA	NA	NA
WP_003676167.1\|1498694_1499156_-	hypothetical protein	NA	NA	NA	NA
WP_003667540.1\|1499266_1500499_-	arginine deiminase	NA	NA	NA	NA
WP_003676169.1\|1500706_1501726_-	serine hydrolase	NA	NA	NA	NA
WP_003676171.1\|1501918_1502518_+	hypothetical protein	NA	NA	NA	NA
WP_085954352.1\|1502596_1503622_-	hypothetical protein	NA	NA	NA	NA
WP_016496411.1\|1503673_1504597_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.1e-33	31.7
WP_003676173.1\|1505626_1506505_-	hypothetical protein	NA	NA	NA	NA
WP_003676175.1\|1508399_1508729_-	hypothetical protein	NA	NA	NA	NA
WP_003676177.1\|1508957_1509434_-	hypothetical protein	NA	NA	NA	NA
WP_003676179.1\|1509550_1511488_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	4.1e-93	38.0
WP_003667520.1\|1511487_1511775_-	cupredoxin domain-containing protein	NA	NA	NA	NA
WP_003676180.1\|1511774_1512152_-	cupredoxin domain-containing protein	NA	NA	NA	NA
WP_003676182.1\|1512418_1513000_+\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_003676185.1\|1513083_1513986_+	EamA family transporter	NA	NA	NA	NA
WP_003676187.1\|1514167_1515100_-	carbamate kinase	NA	NA	NA	NA
WP_003666512.1\|1515116_1516124_-	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_003676189.1\|1516377_1517217_+	response regulator	NA	NA	NA	NA
WP_003676192.1\|1517329_1518838_-	xylulokinase	NA	NA	NA	NA
WP_003676193.1\|1518972_1520322_-	xylose isomerase	NA	NA	NA	NA
WP_003676195.1\|1520531_1520705_-	hypothetical protein	NA	NA	NA	NA
WP_035162063.1\|1520760_1520979_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_003676198.1\|1521034_1521772_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	3.0e-52	45.8
WP_003676199.1\|1521773_1522997_-\|transposase	IS21 family transposase	A0A059NT83	Lactococcus_phage	1.3e-87	44.5

DBSCAN-SWA_10

1594011 : 1652994

Streptococcus_phage(34.78%)

tRNA,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003670462.1\|1594011_1594368_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_003676272.1\|1594367_1594703_-	PspC domain-containing protein	NA	NA	NA	NA
WP_003676274.1\|1594732_1595731_-	peptide chain release factor 2	B5LLF2	Mycobacterium_phage	1.5e-06	38.7
WP_003667437.1\|1595774_1595930_-	hypothetical protein	NA	NA	NA	NA
WP_003666386.1\|1595930_1598294_-	preprotein translocase subunit SecA	NA	NA	NA	NA
WP_003666382.1\|1598504_1599053_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_035162080.1\|1599184_1599865_-	ComF family protein	NA	NA	NA	NA
WP_003676279.1\|1599842_1601177_-	DNA/RNA helicase	A0A1X9I5S6	Streptococcus_phage	1.3e-74	37.4
WP_085954353.1\|1601238_1601913_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	5.9e-39	42.0
WP_003668074.1\|1601955_1602924_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_003676281.1\|1602992_1604378_-	MFS transporter	NA	NA	NA	NA
WP_016497065.1\|1604377_1604788_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003667430.1\|1605050_1605311_-	hypothetical protein	NA	NA	NA	NA
WP_003676285.1\|1605337_1607176_-	APC family permease	NA	NA	NA	NA
WP_003667428.1\|1607260_1608871_-	APC family permease	NA	NA	NA	NA
WP_003676287.1\|1608952_1609441_-\|tRNA	prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_003666369.1\|1609533_1611162_-	chaperonin GroEL	A0A240F779	uncultured_virus	7.4e-160	54.4
WP_003666368.1\|1611253_1611538_-	co-chaperone GroES	A0A221S422	uncultured_virus	2.4e-10	37.4
WP_003667423.1\|1611572_1611752_-	hypothetical protein	NA	NA	NA	NA
WP_003676290.1\|1611772_1612417_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_003668074.1\|1612688_1613657_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_003676292.1\|1613736_1615674_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	3.8e-54	29.2
WP_003676294.1\|1615704_1616670_-	ketopantoate reductase family protein	NA	NA	NA	NA
WP_085954354.1\|1616683_1617841_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_085954355.1\|1617892_1618816_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.9e-33	31.7
WP_080564821.1\|1618937_1619738_-	carbon-nitrogen family hydrolase	M1I3K9	Paramecium_bursaria_Chlorella_virus	8.1e-11	23.9
WP_003676299.1\|1620315_1621104_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	9.1e-39	37.3
WP_003676301.1\|1621115_1622360_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	4.0e-105	51.3
WP_003676303.1\|1622377_1623151_+	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	2.1e-32	37.3
WP_003676306.1\|1623257_1624289_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	5.9e-62	39.3
WP_003676308.1\|1624307_1624862_-	ribosomal protein S18-alanine N-acetyltransferase	A0A1B2IBP2	Erwinia_phage	4.6e-05	30.8
WP_003676310.1\|1624845_1625571_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_079375827.1\|1625746_1626358_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	7.8e-30	39.5
WP_003666351.1\|1627197_1628193_-	UDP-glucose 4-epimerase GalE	A0A1V0SG19	Hokovirus	1.3e-45	35.9
WP_003676312.1\|1628304_1629276_-	Ppx/GppA family phosphatase	NA	NA	NA	NA
WP_003676314.1\|1629279_1631523_-	RNA degradosome polyphosphate kinase	NA	NA	NA	NA
WP_003676316.1\|1631524_1633039_-	hypothetical protein	NA	NA	NA	NA
WP_003676318.1\|1633203_1633965_-	acyl-ACP thioesterase	NA	NA	NA	NA
WP_003676320.1\|1633974_1634841_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.2e-77	53.3
WP_003676322.1\|1634849_1635200_-	DNA replication initiation control protein YabA	NA	NA	NA	NA
WP_003676324.1\|1635210_1636224_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	6.6e-34	32.8
WP_003666336.1\|1636238_1636562_-	DUF970 domain-containing protein	NA	NA	NA	NA
WP_003676327.1\|1636578_1637220_-	dTMP kinase	M1PSC7	Streptococcus_phage	3.0e-56	55.2
WP_003667379.1\|1637229_1637478_-	YaaL family protein	NA	NA	NA	NA
WP_035162102.1\|1637482_1638082_-	recombination protein RecR	NA	NA	NA	NA
WP_003666329.1\|1638088_1638397_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_003676329.1\|1638417_1640250_-	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	2.9e-56	38.6
WP_003667373.1\|1640522_1641035_-	nucleoside deaminase	NA	NA	NA	NA
WP_003666324.1\|1641292_1641514_+	glutaredoxin-like protein NrdH	A0A0M7REK7	Lactobacillus_phage	5.0e-11	45.3
WP_003676331.1\|1641613_1643785_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	1.5e-253	59.8
WP_003666319.1\|1643899_1644919_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	7.7e-115	62.6
WP_003676333.1\|1645273_1647910_+	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	NA	NA	NA	NA
WP_003676335.1\|1648001_1648757_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_003676338.1\|1648757_1649369_-	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_003676340.1\|1649361_1649694_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_003666313.1\|1649884_1650256_+	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_003676341.1\|1650389_1650620_+	hypothetical protein	NA	NA	NA	NA
WP_003676342.1\|1650867_1651125_+	hypothetical protein	NA	NA	NA	NA
WP_085954356.1\|1651269_1652994_+\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	2.1e-96	39.5

DBSCAN-SWA_11

1693584 : 1747997

Tupanvirus(23.08%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013923736.1\|1693584_1694715_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	7.1e-37	32.1
WP_003675973.1\|1695526_1696357_-	metallophosphoesterase	NA	NA	NA	NA
WP_003675974.1\|1696416_1697916_-	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	1.6e-68	34.1
WP_035161989.1\|1698128_1698845_-	DUF3642 domain-containing protein	NA	NA	NA	NA
WP_003675983.1\|1700508_1700847_-	hypothetical protein	NA	NA	NA	NA
WP_003675984.1\|1700950_1701319_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003675988.1\|1701606_1702107_-	thiol peroxidase	NA	NA	NA	NA
WP_003668074.1\|1702540_1703509_-\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_003675989.1\|1703596_1704778_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	2.9e-25	26.6
WP_003674676.1\|1710815_1712228_+	hypothetical protein	NA	NA	NA	NA
WP_003674675.1\|1712429_1713956_-\|tRNA	lysine--tRNA ligase	A0A2K9KZX5	Tupanvirus	4.4e-90	41.9
WP_003674674.1\|1713976_1714978_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_003674673.1\|1715085_1716006_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_035161528.1\|1716096_1718205_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	H8ZJI5	Ostreococcus_tauri_virus	4.6e-106	48.4
WP_003665656.1\|1718438_1718981_-	hypoxanthine phosphoribosyltransferase	A0A2K9L634	Tupanvirus	3.2e-11	27.8
WP_035161525.1\|1718973_1720368_-\|tRNA	tRNA lysidine(34) synthetase TilS	A0A1V0SD04	Indivirus	3.5e-09	20.6
WP_003665652.1\|1720369_1720864_-	RNA-binding protein S1	NA	NA	NA	NA
WP_003674667.1\|1721052_1721409_-	septation inhibitor protein	NA	NA	NA	NA
WP_003674666.1\|1721509_1721782_-	RNA-binding S4 domain-containing protein	NA	NA	NA	NA
WP_003674663.1\|1721778_1725318_-	transcription-repair coupling factor	NA	NA	NA	NA
WP_003674660.1\|1725336_1725897_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_079375888.1\|1726093_1726741_+	CBS domain-containing protein	NA	NA	NA	NA
WP_003674655.1\|1727047_1727788_-	hypothetical protein	NA	NA	NA	NA
WP_003674654.1\|1728171_1729410_-	cytosine deaminase	NA	NA	NA	NA
WP_003674652.1\|1729400_1730777_-	cytosine permease	NA	NA	NA	NA
WP_003667249.1\|1730967_1731342_-	type II toxin-antitoxin system PemK/MazF family toxin	A0A1S5RCS0	Lactobacillus_phage	4.9e-11	35.0
WP_003674650.1\|1731360_1732488_-	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	8.4e-30	28.0
WP_003674648.1\|1732487_1732850_-	holo-ACP synthase	NA	NA	NA	NA
WP_003665629.1\|1733181_1733322_+	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA
WP_003674646.1\|1733343_1734870_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	A0A2K9KZV5	Tupanvirus	2.7e-39	26.0
WP_003674644.1\|1734869_1736087_+	D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA	NA	NA	NA
WP_003665624.1\|1736106_1736346_+	D-alanine--poly(phosphoribitol) ligase subunit DltC	NA	NA	NA	NA
WP_003674642.1\|1736338_1737628_+	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA
WP_050802154.1\|1737671_1738613_-	glutaminase	NA	NA	NA	NA
WP_013923736.1\|1738997_1740128_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	7.1e-37	32.1
WP_003674636.1\|1740184_1742836_-	DUF1542 domain-containing protein	NA	NA	NA	NA
WP_003674633.1\|1743110_1743917_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	2.3e-37	39.5
WP_003674631.1\|1743998_1745492_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	3.4e-71	38.7
WP_003674629.1\|1745563_1746943_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_003674627.1\|1747100_1747997_-\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA

DBSCAN-SWA_12

1775731 : 1837708

unidentified_phage(18.75%)

tRNA,protease,integrase,transposase

attL 1814117:1814134|attR 1836916:1836933

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003674580.1\|1775731_1777759_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.0e-89	36.2
WP_003674578.1\|1777836_1778685_-	DUF72 domain-containing protein	A0A1V0CNL1	Kaumoebavirus	2.5e-10	31.1
WP_003674572.1\|1779134_1779833_-	NAD-dependent protein deacylase	NA	NA	NA	NA
WP_003674570.1\|1779838_1780798_-	hypothetical protein	NA	NA	NA	NA
WP_003674568.1\|1780790_1782053_-	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
WP_003674567.1\|1782045_1782987_-	Ppx/GppA family phosphatase	NA	NA	NA	NA
WP_003674565.1\|1783131_1784154_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_003674562.1\|1784431_1785391_+	site-specific DNA-methyltransferase	A0A1W6JJW1	Lactococcus_phage	4.4e-19	28.5
WP_003665559.1\|1785442_1785886_-	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	8.4e-26	44.4
WP_003674560.1\|1785973_1788292_-	AAA family ATPase	NA	NA	NA	NA
WP_003674558.1\|1788304_1789474_-	cation:proton antiporter	NA	NA	NA	NA
WP_035161517.1\|1791079_1792552_-	amino acid permease	NA	NA	NA	NA
WP_003674553.1\|1792849_1793491_+	endonuclease III	NA	NA	NA	NA
WP_003674551.1\|1793502_1793793_+	FMN-binding protein	NA	NA	NA	NA
WP_003674549.1\|1793874_1795071_-	tetracycline resistance MFS efflux pump	A0A2H4UVM2	Bodo_saltans_virus	2.0e-05	20.4
WP_063164285.1\|1795185_1796511_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	4.7e-48	31.0
WP_003674547.1\|1796738_1797671_-	L-lactate dehydrogenase	NA	NA	NA	NA
WP_003671339.1\|1798194_1799046_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003674545.1\|1799058_1800123_+	methionine ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.5e-17	27.5
WP_003667163.1\|1800097_1800805_+	ABC transporter permease	NA	NA	NA	NA
WP_003674542.1\|1800823_1801969_+	ArgE/DapE family deacylase	NA	NA	NA	NA
WP_003674539.1\|1802300_1803653_+	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA
WP_003674537.1\|1803804_1804233_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_003674534.1\|1804304_1804943_-	ABC transporter permease	NA	NA	NA	NA
WP_003674533.1\|1804935_1805706_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-25	38.0
WP_003674531.1\|1805680_1806346_-	ABC transporter permease	NA	NA	NA	NA
WP_003674529.1\|1806412_1807312_-	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003674526.1\|1807461_1807917_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_003674523.1\|1807919_1808774_+	NAD(P)H-binding protein	NA	NA	NA	NA
WP_003674522.1\|1808989_1810180_-	phosphopentomutase	NA	NA	NA	NA
WP_003674520.1\|1810283_1812092_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.3e-69	29.9
WP_003674517.1\|1812549_1813284_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_085954357.1\|1813341_1814472_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	9.3e-37	32.1
1814117:1814134	attL	NA	NA	NA	NA
WP_003674515.1\|1814651_1815356_-	hypothetical protein	NA	NA	NA	NA
WP_003667139.1\|1815465_1815786_-	membrane protein	NA	NA	NA	NA
WP_003674513.1\|1816072_1817428_+	FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	7.6e-126	52.3
WP_003674509.1\|1817902_1820752_-	DEAD/DEAH box helicase	Q9T1H9	Lactobacillus_phage	4.9e-26	28.2
WP_003674507.1\|1820772_1821273_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_003674505.1\|1821272_1822226_-	aldo/keto reductase	NA	NA	NA	NA
WP_003665466.1\|1822501_1823272_-	triose-phosphate isomerase	NA	NA	NA	NA
WP_003665465.1\|1823403_1823805_+	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_003674501.1\|1823816_1824359_+	serine hydrolase family protein	NA	NA	NA	NA
WP_003674500.1\|1826332_1827751_+	sodium:proton antiporter	NA	NA	NA	NA
WP_003674499.1\|1827896_1828130_+	cytochrome b5	NA	NA	NA	NA
WP_003674496.1\|1828195_1828846_-	NAD(P)H-binding protein	NA	NA	NA	NA
WP_003674494.1\|1828924_1829152_-	hypothetical protein	NA	NA	NA	NA
WP_003674492.1\|1829259_1830000_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	6.0e-08	38.2
WP_003674491.1\|1830163_1831489_-	MHS family MFS transporter	Q6JIH2	Burkholderia_virus	2.4e-39	31.7
WP_003674489.1\|1832213_1832783_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_085954358.1\|1832924_1833890_+\|transposase	IS30 family transposase	H7BW47	unidentified_phage	4.7e-13	30.0
WP_003674487.1\|1833976_1834201_+	hypothetical protein	NA	NA	NA	NA
WP_003674484.1\|1834321_1834810_+	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
WP_003674482.1\|1834860_1835199_-	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_003674480.1\|1835201_1836200_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
WP_072575187.1\|1836577_1837708_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.3e-35	31.9
1836916:1836933	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_LN906636

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_LN906636_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN906636_1

8581-8762

Orphan

Consensus_repeat	Method
TGTAGGTCTGTGTTCAGCCCTACGGCCACAAGGGAT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_LN906636_1

>merge|NZ_LN906636|1|8581-8762|CRISPRCasFinder
TGTAGGTCTGTGTTCAGCCCTACGGCCACAAGAGATACGGCGGTTTTGAGTTTTTTTATGATTTTAGATGTAGGTCTGTGTTCAGCCCTACGGCCACAAGGGATACAAGAGTTTAGTATTTTAGAGTTGCAAAATCCAAAAATACGTGTAGGTCTGTGTTCAGCCCTACGGCCACAAGGGAT

>NZ_LN906636|1|1|8581-8762|CRISPRCasFinder
TGTAGGTCTGTGTTCAGCCCTACGGCCACAAGAGAT	ACGGCGGTTTTGAGTTTTTTTATGATTTTAGA
TGTAGGTCTGTGTTCAGCCCTACGGCCACAAGGGAT	ACAAGAGTTTAGTATTTTAGAGTTGCAAAATCCAAAAATACG
TGTAGGTCTGTGTTCAGCCCTACGGCCACAAGGGAT

>NZ_LN906636.1|WP_003676765.1|5806_8272_+|hypothetical-protein
MAELQKHDYELDEQEEFYKQYLPLVNSDLDPVDVQVHSTDGLIGDLLLEFKPSIKDVNAVLFQAIKYLSHFRLNGQAVPSNILLISYDDGTAYYYDANAYLADIEKVYTRAASKDVTGQFVADDPKAIWHYNDSPVDEDSMIQLMKKAYKRDQDGNQQWVAVHIDSDNIIGWATTYYNENKGARKADFLGDDAITGEIRQPRKLKGRILPYTGKDNAAFQYIMDKLNDYVERADLGAFYTPMPYATKSNELVYDAIRRFQQSGNDDYIILDRCAGTGNLESTLNDDVPDDIDDKDVLSHVIVNTYEFFEYKVLKQRLGDQVRNIIPPVANFTDGTVEGSDALSQEFVENPIIKKYVDNAKCTIIIYENPPFAETNSIEHQKRHSGKSSSKKWKYNYVTMQAKQELTGARSNDMSNVFIWSAFHYYLRQSTDSAIIFSPLKYWKLGEDWFDFKAEKAFAFNRKYFHAVRQMVNGCVLWLNETANSTDNGGESLTLTPYDIKDAEAPNYDTGTIQELNQTVTAKRIHNNFSSAYYDEIDEPNDVIQKKEKPYPLHPKAIWSAFDGTEARDKTLSSNAKYNPDIVAYLKAGGSTFENDSSNAHLTRNTEHNAHGFHLRVSNYLTKLPMFAANWWKAYRPNWWEIGVYYRSGDGKVQFETDVENGKLDQWLNRVLFYTCLENYNKIRSLEGSDGRWYYNELCLDDNKGKVDNPDDKSEPETLANQQLKDFLTNLNDDESKMYKLWQRILKEAKATNNYDKRLNYGIYQINDELNTSHKETNSRGKTTTVYDYPQLNGDLNTMRGLIKDYYHKYIMPNLFKYEFIK
>NZ_LN906636.1|WP_003676764.1|5311_5794_+|hypothetical-protein
MAQTQTKTYSITEMARICGVSVSSMRTQLIKRGFKPAETGENNSKLYSDKAFKTMRDYYRSKSKNGSNRQPQTTRSELIESKNAQIEQLQREVELLTAQLHTKDKQIDAMTALAESNAQLTAQAHTLDASHRLEDSTTASQNESKTVSEEPHGFFWRIFH
>NZ_LN906636.1|WP_085954365.1|3911_5282_+|relaxase/mobilization-nuclease-domain-containing-protein
MVVSKTIKSTNATAALRYILNDTPKVQNETGHRVLAVASQNIDKDYADKIDPLYSAAQFNVIRHSTKKYKLHGKDKKIQVEHLIFSFSNKDFDLSNVTTQAKQALKLVGDYLKERLGPSSQWVGVAQDDNEGHNLHVHVAVNSVNVDGKVFNTNLVRQTLPDGIMNTFNDYLDNHFEQVTGRQFQRVQPQPVRATDTTVSSKERNMKANRSSANSWKDDLKVILDEAMTNNVDIQGFLDQLAANGVTVTEKPHKMGKTADGSVKKRTSYHYLYVDTRGKQHRSVDFAITRQGAVRGLGEDYIPDNIQRQLELNATKQADSTGKTAEDDLDSIINNIENDLNDAVSAAVSANAQSNTSKPSMTSISSVEPMVAAAANSDEVATSIESVNQRKRRNLQERVNNEFERTDGPRLIMQTVSRSKKPTKEEIAEAQNAQKINHNGPSSSSTGSENSSDLEL
>NZ_LN906636.1|WP_085954364.1|3607_3925_+|hypothetical-protein
MARLSAKLGLSGNEIIRRLLDNADEVTLKVIDKSTKQNDLILANLKQQNWLLSNLTNNLNQVTHFLNQHQNDLTLDEMKTLATIFNQFYRSVKELRKELIGNGRK
>NZ_LN906636.1|WP_003676769.1|2917_3172_+|hypothetical-protein
MSKKLTKEEQELADAKAKIERKYARIAKRRLNKINQKLFPDVDLLGMSKSEFERLLDDSKIVMKQQSDNKFTPLNPVEDDNKAF
>NZ_LN906636.1|WP_003676767.1|0_2730_+|hypothetical-protein
MQMERVFVMEKEDFNKKLSRKQLKLTRYSHSRNAVYRAILAMLDAIDTDNIKQSDYGDTLKLYDLVLDLMVSDSSRLSAKSRMFFVSEHWSYMVNDPYIVDTDNYGYSPYYQYALGPDNKPLNLGDQFGEMAHLDVESDGSRKARRSKVCPDIKFNTPDKWQFGSAWNDEGYPTKFDKNGRPVLDGWSKSEYDKLDNFASWLTRNGYGKTRNRVQLFLSFHTLDSAENVVDGVAEHLAAHAHGFIQTANAISRYTLMQHLDFDFDFYISTFNWLATSNVDHIIQRGLTFLRQLAGAVKNYQLASDKHETLLYLVHDSRSAVKADKPSYRPSWVFSWLPEQPDASYSSISGAWDDTPTNLGDQAIVNNLHSAINQENGAVAMVGRTKNEHKRFTMRDVATIREVANGNRYYVQPIVVAFMNLVYAKRVEITDFWDLLRCAVNQDDYIRLTTMPNSSKKPSLTSLYDKASKAYIRDKQLNGTVHKETFMVLGQMGGTGKSRLAAELARYYDCGREPLTATHKTTDLTFDPFQDYAGQQSVILDEVAGNDFSLPDLKGLLDPYSKNAQGSRYNNVSLWNVKRLFLTAVYPDGLTGYVKDVLAHAPGATNGGYLEKVLDANGKPTWQIKTDDASQQRYMSDFTQLSRRLGVLITVNHSKTATQIVVSIRNAKDADAVSLVGNSLRFVHIKETSFRVNYRITDAVSSDKMAALARKIAKCVDLLQAKANAVYEQHGTACFVDDYDHEFIDSGETLGLRDESPLTVIETPAKLHERHQESQLSDARNQLQSIFKDVMSPLTRHDINSSGNGVKFTLNNLVDVLNYWYSVDVTENAQSLDWIVDDSNDHLGSRLDVTMNLLSVFESFGFRDVEDCQKAVNDYLLLVTGVDNALVLKDSDDTEPTGSWSDYVESLAN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LN906636_1	1.1\|8617\|32\|NZ_LN906636\|CRISPRCasFinder	8617-8648	32	NZ_LN906636	Lactobacillus reuteri plasmid p53608_2, complete genome, strain ATCC 53608	8617-8648	0	1.0
NZ_LN906636_1	1.2\|8685\|42\|NZ_LN906636\|CRISPRCasFinder	8685-8726	42	NZ_LN906636	Lactobacillus reuteri plasmid p53608_2, complete genome, strain ATCC 53608	8685-8726	0	1.0
NZ_LN906636_1	1.2\|8685\|42\|NZ_LN906636\|CRISPRCasFinder	8685-8726	42	NZ_CP054661	Lactobacillus reuteri strain AN417 plasmid pAN417D, complete sequence	8695-8736	8	0.81
NZ_LN906636_1	1.1\|8617\|32\|NZ_LN906636\|CRISPRCasFinder	8617-8648	32	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	149478-149509	9	0.719
NZ_LN906636_1	1.1\|8617\|32\|NZ_LN906636\|CRISPRCasFinder	8617-8648	32	NZ_AP019826	Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-3, complete sequence	828-859	9	0.719
NZ_LN906636_1	1.1\|8617\|32\|NZ_LN906636\|CRISPRCasFinder	8617-8648	32	NZ_CP006001	Escherichia coli B7A plasmid pEB3, complete sequence	57993-58024	9	0.719
NZ_LN906636_1	1.1\|8617\|32\|NZ_LN906636\|CRISPRCasFinder	8617-8648	32	LC494302	Escherichia phage SP27 DNA, complete genome	217965-217996	10	0.688
NZ_LN906636_1	1.1\|8617\|32\|NZ_LN906636\|CRISPRCasFinder	8617-8648	32	MK817115	Escherichia phage vB_EcoM_phAPEC6, complete genome	258855-258886	10	0.688
NZ_LN906636_1	1.1\|8617\|32\|NZ_LN906636\|CRISPRCasFinder	8617-8648	32	NC_027364	Escherichia phage PBECO 4, complete genome	67292-67323	10	0.688
NZ_LN906636_1	1.1\|8617\|32\|NZ_LN906636\|CRISPRCasFinder	8617-8648	32	MH383160	Escherichia phage UB, complete genome	127973-128004	10	0.688
NZ_LN906636_1	1.1\|8617\|32\|NZ_LN906636\|CRISPRCasFinder	8617-8648	32	MK327931	Escherichia phage vB_EcoM_G17, complete genome	284231-284262	10	0.688
NZ_LN906636_1	1.1\|8617\|32\|NZ_LN906636\|CRISPRCasFinder	8617-8648	32	LT603033	Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I	162513-162544	10	0.688
NZ_LN906636_1	1.1\|8617\|32\|NZ_LN906636\|CRISPRCasFinder	8617-8648	32	KM507819	Escherichia phage 121Q, complete genome	219992-220023	10	0.688

1. spacer 1.1|8617|32|NZ_LN906636|CRISPRCasFinder matches to NZ_LN906636 (Lactobacillus reuteri plasmid p53608_2, complete genome, strain ATCC 53608) position: , mismatch: 0, identity: 1.0

acggcggttttgagtttttttatgattttaga	CRISPR spacer
acggcggttttgagtttttttatgattttaga	Protospacer
********************************

2. spacer 1.2|8685|42|NZ_LN906636|CRISPRCasFinder matches to NZ_LN906636 (Lactobacillus reuteri plasmid p53608_2, complete genome, strain ATCC 53608) position: , mismatch: 0, identity: 1.0

acaagagtttagtattttagagttgcaaaatccaaaaatacg	CRISPR spacer
acaagagtttagtattttagagttgcaaaatccaaaaatacg	Protospacer
******************************************

3. spacer 1.2|8685|42|NZ_LN906636|CRISPRCasFinder matches to NZ_CP054661 (Lactobacillus reuteri strain AN417 plasmid pAN417D, complete sequence) position: , mismatch: 8, identity: 0.81

acaagagtttagtattttagagttgcaaaatccaaaaatacg	CRISPR spacer
tagagagtttagtattttagagatgcaaaatctaaaaatgat	Protospacer
  .******************* *********.******.

4. spacer 1.1|8617|32|NZ_LN906636|CRISPRCasFinder matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 9, identity: 0.719

acggcggttttgagtttttttatgattttaga	CRISPR spacer
tcacgagtttttagttttttgatgattttatt	Protospacer
 *.  .***** ******** *********

5. spacer 1.1|8617|32|NZ_LN906636|CRISPRCasFinder matches to NZ_AP019826 (Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-3, complete sequence) position: , mismatch: 9, identity: 0.719

acggcggttttgagtttttttatgattttaga	CRISPR spacer
ttatcatttttgagtttatttattattttagt	Protospacer
 .. *. ********** ***** *******

6. spacer 1.1|8617|32|NZ_LN906636|CRISPRCasFinder matches to NZ_CP006001 (Escherichia coli B7A plasmid pEB3, complete sequence) position: , mismatch: 9, identity: 0.719

acggcggttttgagtttttttatgattttaga	CRISPR spacer
aggtgtgttatgagtttttttatcatttttac	Protospacer
* *   *** ************* ***** .

7. spacer 1.1|8617|32|NZ_LN906636|CRISPRCasFinder matches to LC494302 (Escherichia phage SP27 DNA, complete genome) position: , mismatch: 10, identity: 0.688

acggcggttttgagtttttttatgattttaga	CRISPR spacer
gaatgggttttgagtttttttatagttttttc	Protospacer
. .  ******************..****

8. spacer 1.1|8617|32|NZ_LN906636|CRISPRCasFinder matches to MK817115 (Escherichia phage vB_EcoM_phAPEC6, complete genome) position: , mismatch: 10, identity: 0.688

acggcggttttgagtttttttatgattttaga	CRISPR spacer
gaatgggttttgagtttttttatagttttttc	Protospacer
. .  ******************..****

9. spacer 1.1|8617|32|NZ_LN906636|CRISPRCasFinder matches to NC_027364 (Escherichia phage PBECO 4, complete genome) position: , mismatch: 10, identity: 0.688

acggcggttttgagtttttttatgattttaga	CRISPR spacer
gaatgggttttgagtttttttatagttttttc	Protospacer
. .  ******************..****

10. spacer 1.1|8617|32|NZ_LN906636|CRISPRCasFinder matches to MH383160 (Escherichia phage UB, complete genome) position: , mismatch: 10, identity: 0.688

acggcggttttgagtttttttatgattttaga	CRISPR spacer
gaatgggttttgagtttttttatagttttttc	Protospacer
. .  ******************..****

11. spacer 1.1|8617|32|NZ_LN906636|CRISPRCasFinder matches to MK327931 (Escherichia phage vB_EcoM_G17, complete genome) position: , mismatch: 10, identity: 0.688

acggcggttttgagtttttttatgattttaga	CRISPR spacer
gaatgggttttgagtttttttatagttttttc	Protospacer
. .  ******************..****

12. spacer 1.1|8617|32|NZ_LN906636|CRISPRCasFinder matches to LT603033 (Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I) position: , mismatch: 10, identity: 0.688

acggcggttttgagtttttttatgattttaga	CRISPR spacer
gaatgggttttgagtttttttatagttttttc	Protospacer
. .  ******************..****

13. spacer 1.1|8617|32|NZ_LN906636|CRISPRCasFinder matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 10, identity: 0.688

acggcggttttgagtttttttatgattttaga	CRISPR spacer
gaatgggttttgagtttttttatagttttttc	Protospacer
. .  ******************..****

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_LN906635

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_LN906635_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN906635_1

130857-130967

Orphan

Consensus_repeat	Method
TTTTTATATAGACTTAAGTCTATAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN906635_1

>merge|NZ_LN906635|1|130857-130967|CRISPRCasFinder
TTTTTATATAGACTTAAGTCTATATAAATCAACCTTTTGTTTGTTAATCGCTCAAGGTTTGCGATTGCTTGTTTCTTTACGGCTTTTATTATATAGACTTAAGTCTATATT

>NZ_LN906635|1|1|130857-130967|CRISPRCasFinder
TTTTTATATAGACTTAAGTCTATAT	AAATCAACCTTTTGTTTGTTAATCGCTCAAGGTTTGCGATTGCTTGTTTCTTTACGGCTT
TTATTATATAGACTTAAGTCTATATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN906635.1\|WP_003676481.1\|126264_126537_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_003676479.1\|126559_126826_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237049
NZ_LN906635.1\|WP_003676471.1\|127891_128461_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_003676462.1\|129520_130045_-\|putative-antirestriction-protein	unknown	unknown	gnl\|CDD\|377800
NZ_LN906635.1\|WP_003676458.1\|131247_131475_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_003676469.1\|128487_128760_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_003676475.1\|127252_127507_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_003676460.1\|130118_130322_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_003676452.1\|132733_133054_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367932
NZ_LN906635.1\|WP_003676441.1\|136503_136848_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375154
NZ_LN906635.1\|WP_003676443.1\|135030_136239_-\|ParM/StbA-family-protein	unknown	unknown	gnl\|CDD\|212669
NZ_LN906635.1\|WP_003676473.1\|127583_127865_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_035162179.1\|136847_137663_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379293
NZ_LN906635.1\|WP_003676445.1\|134676_135018_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_003676467.1\|128798_129134_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_003676477.1\|126883_127177_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366069

Protein	Function_ID	Function_description	E-value
NZ_LN906635.1\|WP_003676441.1\|136503_136848_-\|hypothetical-protein	gnl\|CDD\|375154	pfam17363, DUF5388, Family of unknown function (DUF5388). This is a family of unknown function found in Lactobacillales.	7.43425e-16
NZ_LN906635.1\|WP_003676452.1\|132733_133054_-\|hypothetical-protein	gnl\|CDD\|367932	pfam04420, CHD5, CHD5-like protein. Members of this family are probably coiled-coil proteins that are similar to the CHD5 (Congenital heart disease 5) protein. In Saccharomyces cerevisiae this protein localizes to the ER and is thought to play a homeostatic role.	0.00559413
NZ_LN906635.1\|WP_003676479.1\|126559_126826_-\|hypothetical-protein	gnl\|CDD\|237049	PRK12300, leuS, leucyl-tRNA synthetase; Reviewed.	0.00113118
NZ_LN906635.1\|WP_003676443.1\|135030_136239_-\|ParM/StbA-family-protein	gnl\|CDD\|212669	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins. ParM is a plasmid-encoded bacterial homolog of actin, which polymerizes into filaments similar to F-actin, and plays a vital role in plasmid segregation. ParM filaments segregate plasmids paired at midcell into the individual daughter cells. This subfamily also contains Thermoplasma acidophilum Ta0583, an active ATPase at physiological temperatures, which has a propensity to form filaments.	7.62039e-33
NZ_LN906635.1\|WP_003676462.1\|129520_130045_-\|putative-antirestriction-protein	gnl\|CDD\|377800	pfam07275, ArdA, Antirestriction protein (ArdA). This family consists of several bacterial antirestriction (ArdA) proteins. ArdA functions in bacterial conjugation to allow an unmodified plasmid to evade restriction in the recipient bacterium and yet acquire cognate modification.	2.50034e-12
NZ_LN906635.1\|WP_035162179.1\|136847_137663_-\|AAA-family-ATPase	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	4.64423e-40
NZ_LN906635.1\|WP_003676477.1\|126883_127177_-\|hypothetical-protein	gnl\|CDD\|366069	pfam00389, 2-Hacid_dh, D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain. This family represents the largest portion of the catalytic domain of 2-hydroxyacid dehydrogenases as the NAD binding domain is inserted within the structural domain.	0.000410308

>NZ_LN906635.1|WP_003676460.1|130118_130322_-|hypothetical-protein
MMSQKELQKYAEQDYKLVDPEYIKQLEQDSKKLIKFKKYSILAAFIAVIVIAVTLPLLRALLTNLLN
>NZ_LN906635.1|WP_003676462.1|129520_130045_-|putative-antirestriction-protein
MEIKVFVSNLAKYNDGELTGQWTTLPVDDVNKDILDKLDLGGDSKQGYHDEWFISDYEAPFKIGEYDNLYALNELAEALEDYDTIEDVYNALDDREATGCEDVYDFDDDFFDTMFSSRQEVARAVFFGDIHNWLDPYIFINGCGNCESMTEYDYQEMLNNHADEIISQFKEENL
>NZ_LN906635.1|WP_003676467.1|128798_129134_-|hypothetical-protein
MKKLHYRRENYPVTFKWIKPDDYFDGELIRKSWYFSVCDWFGNELEGFYDENELLEYWEQLTDEELDDIQIFAYPQEDGESVEKRELVNIGCANPAVKRTIVKEKYIFPNW
>NZ_LN906635.1|WP_003676469.1|128487_128760_-|hypothetical-protein
MEKSVWTKTQKALFDWLVQWEVSGDEELATKIVNAGYLGYEYGAIGCEEVDREQYENDSDYRSFIDSQSENWRDDEDLPGSKWWLIGAQY
>NZ_LN906635.1|WP_003676471.1|127891_128461_-|hypothetical-protein
MEKKITGVNIMQKVNGEIGVILEKSWDMGILWNKVGSYETIAELSQLIEEWYPWSVDEAELKELTEEFLENQYIDVDGEEIELIQRVGENQVYVKYCDYSVINECDCLIYDKSKKHYLLGFSNTGWARIDGAIDLATGTVGYYNDQENIYTPVGYLEDDDLDMLNGIIQDFDLSIDYECSVKREKELVA
>NZ_LN906635.1|WP_003676473.1|127583_127865_-|hypothetical-protein
MSKLEKMKECLLSSIEIDMQQIEEIKQQPQSQIDLMGGVKEWYRSTGCSNYYTEIVQAIKSAEYKYPDSDSVWEKAERIKDEIVREKLSLVQL
>NZ_LN906635.1|WP_003676475.1|127252_127507_-|hypothetical-protein
MELKEFVQKGYTINAQVPVVETHEVNLDNLEEDMGDNLGEVIDTWIDDSKPVSYDILDPDGELISGYKPTLFDDEDVRAFIANL
>NZ_LN906635.1|WP_003676477.1|126883_127177_-|hypothetical-protein
MSIYTMKDWNKDGELTPQLFQEVEHEIYSDMYCVLPPYPLEEVTKEILESQLGIKFIQTFCVGEEYDQDDDGNYLYKSFGKTADGKCFYLGLRRSEY
>NZ_LN906635.1|WP_003676479.1|126559_126826_-|hypothetical-protein
MIIKFAGIDAIPADCYILNFIVDGKDETIFCQGIEELMSTVLTADEFDDWLSGEGLPSLNGKKIDDEVEFAEEYIDKTADDFCVLFEN
>NZ_LN906635.1|WP_003676481.1|126264_126537_-|hypothetical-protein
MSWNDLVIEKSRGIVTEKNIDKFNCDFWCAIDNEHNSDIPDGEFCEFAIDMWGMKLKGHYIAEWIGDDEYPNETEPCEIELDYLEIVKVA
>NZ_LN906635.1|WP_003676458.1|131247_131475_-|hypothetical-protein
MVSEAQKEATKKYRAENPLKKTYWDRKGQARGFINVNLKKSTKLSQAINENRLQYIDDLKELHSDIEQRLKDLQQ
>NZ_LN906635.1|WP_003676452.1|132733_133054_-|hypothetical-protein
MGSSNSIINIVVKKLINIIGQDRDNDLIWYLNYLLQKEYRETYEDNLLESMTLIQGIIRCPDRIYNGVLLYVLSQFDDDYSAVYDDYMDGLDVELIICLNEYVKRI
>NZ_LN906635.1|WP_003676445.1|134676_135018_-|hypothetical-protein
MSMKTFTYRYDSNSDIAKWLANQNNKTGSFDAVIRTIVANFGDGDYLNAVLSQVNVNLNGAPKSVQREEKIVDKMVETSEKKPVSKPKPKETKDKNDDDEDGGSTTLDMMSSL
>NZ_LN906635.1|WP_003676443.1|135030_136239_-|ParM/StbA-family-protein
MMKTANDLGYGSVKAIIDDKEIQFPSVFTIEREQDIASPVEFESKSQKDEYMKEFLNHMDVTISSSSIKTPGRFLIGQNAIDQNLPLTHFDINDYAGKAESDYSLILTLSMIAGAAVEQAYEEGKDLSEPLKVNTRMAAALPVKEGSNIETKNMYRERYAGSTHQVTFHNFKNPITVTIEFDKVFVATEGETAQLFISTGKDKDLTKKIKEDFDTRYPEMASLVKAEDLIQAKNVVSIDIGAGTVDIVVIVNGKALVSASYSLSEGYDNALEEALEVLRDKKFNFSSVAELKEFLATKPSPLSRGRYEAVQKVVYAQLEPFCDRIVTEVSRSVRKAGATIEVVYVHGGGSIPMKDQTMLRTKLEDKLKDFNGGQVVPVIWIPKEKAQTLNRDGLEFIVDHAK
>NZ_LN906635.1|WP_003676441.1|136503_136848_-|hypothetical-protein
MALTHSKEQKKPKLKAGSRVSVRNKVKREDIVNEKEEPQVLSVTFPANIRADNHIRNELSALLNLGIEKNMKALLNHLIETEKASLDDSQITRLEKMVSILEEKDFMSKSLKNG
>NZ_LN906635.1|WP_035162179.1|136847_137663_-|AAA-family-ATPase
METKVISFCNQKGGVGKTSTTALVAYNLSKMGYKSLVIDLDPQANMTSLLLKTKSKNDDEIEVIDNTLMNAIKKNENLEKTVIEIAKDFYLIPNAVDFSLYGRYLENNFKSEQDKVGFLSKLINRDLRGKYDFIFIDVPPTLSLQNDTAYYACDDIIIVLQTQQHSLDGAEDLVEYIQTTIIDEFDSDVVVIGVLPVLSKKGAAVDKVILEKAKEMWGDDVFKNHIRLMERVKRMDITGITDGPHDVWDQRAQNKYKEVAKELVKKIGVEE

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Crispr_ID: NZ_LN906635_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN906635_2

131725-131795

Orphan

Consensus_repeat	Method
TTTTTATATAGACTTAAGTCTATAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN906635_2

>merge|NZ_LN906635|2|131725-131795|CRISPRCasFinder
TGGTTGTATATATGTATGTATATATGTATGTATATATGTATATATGTATGTATGTATATGTATGTATATAT

>NZ_LN906635|2|2|131725-131795|CRISPRCasFinder
TGGTTGTATATATGTATGTATATAT	GTATGTATATATGTATATATG
TATGTATGTATATGTATGTATATAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN906635.1\|WP_003676452.1\|132733_133054_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367932
NZ_LN906635.1\|WP_003676479.1\|126559_126826_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237049
NZ_LN906635.1\|WP_003676471.1\|127891_128461_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_003676462.1\|129520_130045_-\|putative-antirestriction-protein	unknown	unknown	gnl\|CDD\|377800
NZ_LN906635.1\|WP_003676458.1\|131247_131475_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_003676469.1\|128487_128760_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_003676475.1\|127252_127507_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_003676460.1\|130118_130322_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_003676441.1\|136503_136848_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375154
NZ_LN906635.1\|WP_003676443.1\|135030_136239_-\|ParM/StbA-family-protein	unknown	unknown	gnl\|CDD\|212669
NZ_LN906635.1\|WP_003676473.1\|127583_127865_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_035162179.1\|136847_137663_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379293
NZ_LN906635.1\|WP_003676445.1\|134676_135018_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_003676467.1\|128798_129134_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN906635.1\|WP_003676477.1\|126883_127177_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366069

Protein	Function_ID	Function_description	E-value
NZ_LN906635.1\|WP_003676441.1\|136503_136848_-\|hypothetical-protein	gnl\|CDD\|375154	pfam17363, DUF5388, Family of unknown function (DUF5388). This is a family of unknown function found in Lactobacillales.	7.43425e-16
NZ_LN906635.1\|WP_003676452.1\|132733_133054_-\|hypothetical-protein	gnl\|CDD\|367932	pfam04420, CHD5, CHD5-like protein. Members of this family are probably coiled-coil proteins that are similar to the CHD5 (Congenital heart disease 5) protein. In Saccharomyces cerevisiae this protein localizes to the ER and is thought to play a homeostatic role.	0.00559413
NZ_LN906635.1\|WP_003676479.1\|126559_126826_-\|hypothetical-protein	gnl\|CDD\|237049	PRK12300, leuS, leucyl-tRNA synthetase; Reviewed.	0.00113118
NZ_LN906635.1\|WP_003676443.1\|135030_136239_-\|ParM/StbA-family-protein	gnl\|CDD\|212669	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins. ParM is a plasmid-encoded bacterial homolog of actin, which polymerizes into filaments similar to F-actin, and plays a vital role in plasmid segregation. ParM filaments segregate plasmids paired at midcell into the individual daughter cells. This subfamily also contains Thermoplasma acidophilum Ta0583, an active ATPase at physiological temperatures, which has a propensity to form filaments.	7.62039e-33
NZ_LN906635.1\|WP_003676462.1\|129520_130045_-\|putative-antirestriction-protein	gnl\|CDD\|377800	pfam07275, ArdA, Antirestriction protein (ArdA). This family consists of several bacterial antirestriction (ArdA) proteins. ArdA functions in bacterial conjugation to allow an unmodified plasmid to evade restriction in the recipient bacterium and yet acquire cognate modification.	2.50034e-12
NZ_LN906635.1\|WP_035162179.1\|136847_137663_-\|AAA-family-ATPase	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	4.64423e-40
NZ_LN906635.1\|WP_003676477.1\|126883_127177_-\|hypothetical-protein	gnl\|CDD\|366069	pfam00389, 2-Hacid_dh, D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain. This family represents the largest portion of the catalytic domain of 2-hydroxyacid dehydrogenases as the NAD binding domain is inserted within the structural domain.	0.000410308

>NZ_LN906635.1|WP_003676458.1|131247_131475_-|hypothetical-protein
MVSEAQKEATKKYRAENPLKKTYWDRKGQARGFINVNLKKSTKLSQAINENRLQYIDDLKELHSDIEQRLKDLQQ
>NZ_LN906635.1|WP_003676460.1|130118_130322_-|hypothetical-protein
MMSQKELQKYAEQDYKLVDPEYIKQLEQDSKKLIKFKKYSILAAFIAVIVIAVTLPLLRALLTNLLN
>NZ_LN906635.1|WP_003676462.1|129520_130045_-|putative-antirestriction-protein
MEIKVFVSNLAKYNDGELTGQWTTLPVDDVNKDILDKLDLGGDSKQGYHDEWFISDYEAPFKIGEYDNLYALNELAEALEDYDTIEDVYNALDDREATGCEDVYDFDDDFFDTMFSSRQEVARAVFFGDIHNWLDPYIFINGCGNCESMTEYDYQEMLNNHADEIISQFKEENL
>NZ_LN906635.1|WP_003676467.1|128798_129134_-|hypothetical-protein
MKKLHYRRENYPVTFKWIKPDDYFDGELIRKSWYFSVCDWFGNELEGFYDENELLEYWEQLTDEELDDIQIFAYPQEDGESVEKRELVNIGCANPAVKRTIVKEKYIFPNW
>NZ_LN906635.1|WP_003676469.1|128487_128760_-|hypothetical-protein
MEKSVWTKTQKALFDWLVQWEVSGDEELATKIVNAGYLGYEYGAIGCEEVDREQYENDSDYRSFIDSQSENWRDDEDLPGSKWWLIGAQY
>NZ_LN906635.1|WP_003676471.1|127891_128461_-|hypothetical-protein
MEKKITGVNIMQKVNGEIGVILEKSWDMGILWNKVGSYETIAELSQLIEEWYPWSVDEAELKELTEEFLENQYIDVDGEEIELIQRVGENQVYVKYCDYSVINECDCLIYDKSKKHYLLGFSNTGWARIDGAIDLATGTVGYYNDQENIYTPVGYLEDDDLDMLNGIIQDFDLSIDYECSVKREKELVA
>NZ_LN906635.1|WP_003676473.1|127583_127865_-|hypothetical-protein
MSKLEKMKECLLSSIEIDMQQIEEIKQQPQSQIDLMGGVKEWYRSTGCSNYYTEIVQAIKSAEYKYPDSDSVWEKAERIKDEIVREKLSLVQL
>NZ_LN906635.1|WP_003676475.1|127252_127507_-|hypothetical-protein
MELKEFVQKGYTINAQVPVVETHEVNLDNLEEDMGDNLGEVIDTWIDDSKPVSYDILDPDGELISGYKPTLFDDEDVRAFIANL
>NZ_LN906635.1|WP_003676477.1|126883_127177_-|hypothetical-protein
MSIYTMKDWNKDGELTPQLFQEVEHEIYSDMYCVLPPYPLEEVTKEILESQLGIKFIQTFCVGEEYDQDDDGNYLYKSFGKTADGKCFYLGLRRSEY
>NZ_LN906635.1|WP_003676479.1|126559_126826_-|hypothetical-protein
MIIKFAGIDAIPADCYILNFIVDGKDETIFCQGIEELMSTVLTADEFDDWLSGEGLPSLNGKKIDDEVEFAEEYIDKTADDFCVLFEN
>NZ_LN906635.1|WP_003676452.1|132733_133054_-|hypothetical-protein
MGSSNSIINIVVKKLINIIGQDRDNDLIWYLNYLLQKEYRETYEDNLLESMTLIQGIIRCPDRIYNGVLLYVLSQFDDDYSAVYDDYMDGLDVELIICLNEYVKRI
>NZ_LN906635.1|WP_003676445.1|134676_135018_-|hypothetical-protein
MSMKTFTYRYDSNSDIAKWLANQNNKTGSFDAVIRTIVANFGDGDYLNAVLSQVNVNLNGAPKSVQREEKIVDKMVETSEKKPVSKPKPKETKDKNDDDEDGGSTTLDMMSSL
>NZ_LN906635.1|WP_003676443.1|135030_136239_-|ParM/StbA-family-protein
MMKTANDLGYGSVKAIIDDKEIQFPSVFTIEREQDIASPVEFESKSQKDEYMKEFLNHMDVTISSSSIKTPGRFLIGQNAIDQNLPLTHFDINDYAGKAESDYSLILTLSMIAGAAVEQAYEEGKDLSEPLKVNTRMAAALPVKEGSNIETKNMYRERYAGSTHQVTFHNFKNPITVTIEFDKVFVATEGETAQLFISTGKDKDLTKKIKEDFDTRYPEMASLVKAEDLIQAKNVVSIDIGAGTVDIVVIVNGKALVSASYSLSEGYDNALEEALEVLRDKKFNFSSVAELKEFLATKPSPLSRGRYEAVQKVVYAQLEPFCDRIVTEVSRSVRKAGATIEVVYVHGGGSIPMKDQTMLRTKLEDKLKDFNGGQVVPVIWIPKEKAQTLNRDGLEFIVDHAK
>NZ_LN906635.1|WP_003676441.1|136503_136848_-|hypothetical-protein
MALTHSKEQKKPKLKAGSRVSVRNKVKREDIVNEKEEPQVLSVTFPANIRADNHIRNELSALLNLGIEKNMKALLNHLIETEKASLDDSQITRLEKMVSILEEKDFMSKSLKNG
>NZ_LN906635.1|WP_035162179.1|136847_137663_-|AAA-family-ATPase
METKVISFCNQKGGVGKTSTTALVAYNLSKMGYKSLVIDLDPQANMTSLLLKTKSKNDDEIEVIDNTLMNAIKKNENLEKTVIEIAKDFYLIPNAVDFSLYGRYLENNFKSEQDKVGFLSKLINRDLRGKYDFIFIDVPPTLSLQNDTAYYACDDIIIVLQTQQHSLDGAEDLVEYIQTTIIDEFDSDVVVIGVLPVLSKKGAAVDKVILEKAKEMWGDDVFKNHIRLMERVKRMDITGITDGPHDVWDQRAQNKYKEVAKELVKKIGVEE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_LN906635_2	2.1\|131750\|21\|NZ_LN906635\|CRISPRCasFinder	131750-131770	21	NZ_LN906635.1	131784-131804	1	0.952

1. spacer 2.1|131750|21|NZ_LN906635|CRISPRCasFinder matches to position: 131784-131804, mismatch: 1, identity: 0.952

gtatgtatatatgtatatatg	CRISPR spacer
gtatgtatatatgtatgtatg	Protospacer
****************.****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LN906635_1	1.1\|130882\|60\|NZ_LN906635\|CRISPRCasFinder	130882-130941	60	NZ_LN906635	Lactobacillus reuteri plasmid p53608_1, complete genome, strain ATCC 53608	130882-130941	0	1.0
NZ_LN906635_2	2.1\|131750\|21\|NZ_LN906635\|CRISPRCasFinder	131750-131770	21	NZ_LN906635	Lactobacillus reuteri plasmid p53608_1, complete genome, strain ATCC 53608	131750-131770	0	1.0
NZ_LN906635_2	2.1\|131750\|21\|NZ_LN906635\|CRISPRCasFinder	131750-131770	21	NZ_LN906635	Lactobacillus reuteri plasmid p53608_1, complete genome, strain ATCC 53608	131784-131804	1	0.952
NZ_LN906635_2	2.1\|131750\|21\|NZ_LN906635\|CRISPRCasFinder	131750-131770	21	NC_004703	Bacteroides thetaiotaomicron VPI-5482 plasmid p5482, complete sequence	26918-26938	1	0.952
NZ_LN906635_2	2.1\|131750\|21\|NZ_LN906635\|CRISPRCasFinder	131750-131770	21	NZ_AP019726	Bacteroides uniformis strain NBRC 113350 plasmid pBUN2, complete sequence	72506-72526	1	0.952
NZ_LN906635_2	2.1\|131750\|21\|NZ_LN906635\|CRISPRCasFinder	131750-131770	21	NC_011562	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 plasmid pCFPG3 DNA, complete sequence	7771-7791	1	0.952
NZ_LN906635_2	2.1\|131750\|21\|NZ_LN906635\|CRISPRCasFinder	131750-131770	21	MH059634	Dickeya phage Sucellus, complete genome	3024-3044	1	0.952
NZ_LN906635_2	2.1\|131750\|21\|NZ_LN906635\|CRISPRCasFinder	131750-131770	21	NZ_CP037436	Lactobacillus plantarum strain EM plasmid pEM7, complete sequence	34181-34201	2	0.905
NZ_LN906635_2	2.1\|131750\|21\|NZ_LN906635\|CRISPRCasFinder	131750-131770	21	NZ_CP040375	Lactobacillus plantarum subsp. plantarum strain BNH17 plasmid unnamed1, complete sequence	4820-4840	2	0.905
NZ_LN906635_2	2.1\|131750\|21\|NZ_LN906635\|CRISPRCasFinder	131750-131770	21	AP014346	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S38-C5, * SEQUENCING IN PROGRESS *	32057-32077	2	0.905

1. spacer 1.1|130882|60|NZ_LN906635|CRISPRCasFinder matches to NZ_LN906635 (Lactobacillus reuteri plasmid p53608_1, complete genome, strain ATCC 53608) position: , mismatch: 0, identity: 1.0

aaatcaaccttttgtttgttaatcgctcaaggtttgcgattgcttgtttctttacggctt	CRISPR spacer
aaatcaaccttttgtttgttaatcgctcaaggtttgcgattgcttgtttctttacggctt	Protospacer
************************************************************

2. spacer 2.1|131750|21|NZ_LN906635|CRISPRCasFinder matches to NZ_LN906635 (Lactobacillus reuteri plasmid p53608_1, complete genome, strain ATCC 53608) position: , mismatch: 0, identity: 1.0

gtatgtatatatgtatatatg	CRISPR spacer
gtatgtatatatgtatatatg	Protospacer
*********************

3. spacer 2.1|131750|21|NZ_LN906635|CRISPRCasFinder matches to NZ_LN906635 (Lactobacillus reuteri plasmid p53608_1, complete genome, strain ATCC 53608) position: , mismatch: 1, identity: 0.952

gtatgtatatatgtatatatg	CRISPR spacer
gtatgtatatatgtatgtatg	Protospacer
****************.****

4. spacer 2.1|131750|21|NZ_LN906635|CRISPRCasFinder matches to NC_004703 (Bacteroides thetaiotaomicron VPI-5482 plasmid p5482, complete sequence) position: , mismatch: 1, identity: 0.952

gtatgtatatatgtatatatg	CRISPR spacer
gtatgtatatatgtatatatt	Protospacer
********************

5. spacer 2.1|131750|21|NZ_LN906635|CRISPRCasFinder matches to NZ_AP019726 (Bacteroides uniformis strain NBRC 113350 plasmid pBUN2, complete sequence) position: , mismatch: 1, identity: 0.952

gtatgtatatatgtatatatg	CRISPR spacer
gtatgtatatatgtatatatt	Protospacer
********************

6. spacer 2.1|131750|21|NZ_LN906635|CRISPRCasFinder matches to NC_011562 (Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 plasmid pCFPG3 DNA, complete sequence) position: , mismatch: 1, identity: 0.952

gtatgtatatatgtatatatg	CRISPR spacer
atatgtatatatgtatatatg	Protospacer
.********************

7. spacer 2.1|131750|21|NZ_LN906635|CRISPRCasFinder matches to MH059634 (Dickeya phage Sucellus, complete genome) position: , mismatch: 1, identity: 0.952

gtatgtatatatgtatatatg	CRISPR spacer
atatgtatatatgtatatatg	Protospacer
.********************

8. spacer 2.1|131750|21|NZ_LN906635|CRISPRCasFinder matches to NZ_CP037436 (Lactobacillus plantarum strain EM plasmid pEM7, complete sequence) position: , mismatch: 2, identity: 0.905

gtatgtatatatgtatatatg	CRISPR spacer
acatgtatatatgtatatatg	Protospacer
..*******************

9. spacer 2.1|131750|21|NZ_LN906635|CRISPRCasFinder matches to NZ_CP040375 (Lactobacillus plantarum subsp. plantarum strain BNH17 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.905

gtatgtatatatgtatatatg	CRISPR spacer
acatgtatatatgtatatatg	Protospacer
..*******************

10. spacer 2.1|131750|21|NZ_LN906635|CRISPRCasFinder matches to AP014346 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S38-C5, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 2, identity: 0.905

gtatgtatatatgtatatatg	CRISPR spacer
atatgtatatatgtatatatc	Protospacer
.*******************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5251 : 65072

Lactobacillus_phage(20.0%)

integrase,tail,holin,terminase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003676419.1\|5251_6682_+\|terminase	terminase	A0A1P8CWR6	Bacillus_phage	3.6e-86	41.0
WP_003676417.1\|6718_8272_+	hypothetical protein	NA	NA	NA	NA
WP_003676414.1\|8286_10002_+	hypothetical protein	A0A0K2FMA5	Brevibacillus_phage	8.3e-37	42.4
WP_003676413.1\|10032_10473_+	hypothetical protein	NA	NA	NA	NA
WP_003676411.1\|10497_11481_+	hypothetical protein	U5J9E0	Bacillus_phage	1.3e-39	29.5
WP_003676409.1\|11550_12114_+	hypothetical protein	NA	NA	NA	NA
WP_003676407.1\|12139_12598_+	hypothetical protein	NA	NA	NA	NA
WP_003676405.1\|12594_13653_+	hypothetical protein	NA	NA	NA	NA
WP_003676403.1\|13668_14220_+	hypothetical protein	NA	NA	NA	NA
WP_003676402.1\|14232_15036_+	hypothetical protein	NA	NA	NA	NA
WP_003676400.1\|15059_16166_+	fibronectin type III domain-containing protein	A0A0H3UZ43	Geobacillus_virus	9.8e-07	26.3
WP_003676398.1\|16318_23452_+	hypothetical protein	A0A2K9VCK7	Lactobacillus_phage	8.9e-16	28.6
WP_003676396.1\|23463_23778_+	hypothetical protein	V9QJA4	Oenococcus_phage	7.8e-10	42.2
WP_003676394.1\|23770_23983_+	hypothetical protein	NA	NA	NA	NA
WP_003676391.1\|24004_24283_+	hypothetical protein	NA	NA	NA	NA
WP_003676389.1\|24381_24666_+\|holin	phage holin	NA	NA	NA	NA
WP_050802162.1\|24679_24949_+	hypothetical protein	A0A2H4PBB2	Lactobacillus_phage	6.7e-10	50.9
WP_003676387.1\|25039_25642_+	hypothetical protein	NA	NA	NA	NA
WP_003676385.1\|25748_26273_+	hypothetical protein	NA	NA	NA	NA
WP_003676384.1\|26285_27314_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_003676381.1\|27413_36485_+\|tail	phage tail protein	A0A0N9S894	Staphylococcus_phage	1.2e-09	20.4
WP_003676379.1\|36590_37112_+	hypothetical protein	NA	NA	NA	NA
WP_003676377.1\|37196_38828_+	hypothetical protein	NA	NA	NA	NA
WP_003676375.1\|38846_39887_+	hypothetical protein	NA	NA	NA	NA
WP_003676373.1\|39899_41996_+	DUF5048 domain-containing protein	NA	NA	NA	NA
WP_003676372.1\|42043_42778_+	hypothetical protein	A0A0H3V0Q5	Geobacillus_virus	3.0e-28	35.0
WP_003676369.1\|42788_43178_+	hypothetical protein	NA	NA	NA	NA
WP_003676367.1\|43192_44548_+	hypothetical protein	NA	NA	NA	NA
WP_003676365.1\|44561_45245_+	hypothetical protein	NA	NA	NA	NA
WP_003676362.1\|45385_46657_+	LysM peptidoglycan-binding domain-containing protein	Q9AZ52	Lactococcus_phage	1.8e-92	47.7
WP_085954362.1\|47307_48438_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.6e-36	32.1
WP_003676669.1\|48667_49171_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_003676667.1\|49360_50410_+	hypothetical protein	Q332G7	Clostridium_botulinum_C_phage	5.4e-39	32.2
WP_003676664.1\|50406_51591_+	hypothetical protein	Q332G6	Clostridium_botulinum_C_phage	1.2e-23	26.4
WP_003676662.1\|51601_54880_+	DNA polymerase III subunit alpha	A0A218KC91	Bacillus_phage	4.6e-185	36.9
WP_003676661.1\|55014_55452_+	hypothetical protein	NA	NA	NA	NA
WP_003676659.1\|55455_56820_+	ligase	A0A0K2FLM0	Brevibacillus_phage	8.5e-77	38.7
WP_003676658.1\|56972_57464_+	DUF1064 domain-containing protein	A0A1I9KKZ1	Lactobacillus_phage	6.7e-40	55.7
WP_003676656.1\|57471_57753_+	hypothetical protein	NA	NA	NA	NA
WP_003676655.1\|57721_58045_+	hypothetical protein	NA	NA	NA	NA
WP_050802163.1\|58063_58645_+	conjugal transfer protein	A0A060AGD9	Listeria_phage	3.1e-36	46.0
WP_003676650.1\|58665_58935_+	hypothetical protein	NA	NA	NA	NA
WP_003676646.1\|59089_59374_+	hypothetical protein	NA	NA	NA	NA
WP_003676644.1\|59366_59645_+	hypothetical protein	A0A1S5RCN3	Lactobacillus_phage	1.0e-13	48.3
WP_003676642.1\|59631_59844_+	hypothetical protein	NA	NA	NA	NA
WP_003676640.1\|59854_60226_+	hypothetical protein	NA	NA	NA	NA
WP_003676635.1\|60424_60829_+	hypothetical protein	NA	NA	NA	NA
WP_003676633.1\|61987_62350_+	hypothetical protein	NA	NA	NA	NA
WP_003676631.1\|63029_63623_+	LysM peptidoglycan-binding domain-containing protein	A0A249XZV3	Enterococcus_phage	1.0e-18	36.9
WP_035162160.1\|64478_65072_+\|integrase	tyrosine-type recombinase/integrase	E2ELN7	Clostridium_phage	4.2e-20	34.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LN906634

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_LN906636

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_LN906635

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection