CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_016633	Sphaerochaeta pleomorpha str. Grapes, complete sequence	1 crisprs	DinG,csa3,DEDDh,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	0	4	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_016633_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_016633_1

3520456-3523663

TypeI

I-C

Consensus_repeat	Method
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	PILER-CR
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CRISPRCasFinder
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CRT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	PILER-CR

48 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NC_016633_1

>merge|NC_016633|1|3520456-3523663|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTCGCACCCTTCACGGGTGCGTGAATTGAAACAATGACCATCACCCAATAGGAACAACACCAATGACGTCGCACCCTTCACGGGTGCGTGAATTGAAACCTTTACGGGCAATGTGCTTTGATCGATATGCACATAGTCGCACCCTTCACGGGTGCGTGAATTGAAACCACGTCCAGTGCTTGGAGTGATTACAAAGGTACGTGTCGCACCCTTCACGGGTGCGTGAATTGAAACCTCAGCCGTTATGACCGAAGATGTTTCACACGAAGTCGCACCCTTCACGGGTGCGTGAATTGAAACAACCACCAAGCGTACCAATCATTAAAATAACTAGTCGCACCCTTCACGGGTGCGTGAATTGAAACAACCACCAAGCGTACCAATCATTAAAATAACTAGTCGCACCCTTCACGGGTGCGTGAATTGAAACCGCGCATTGCACCCGGTGAACTGGACAACGAAGAAGTCGCACCCTTCACGGGTGCGTGAATTGAAACCACATATTCGTAAATGAGGCACTGCTCAGGACCGTCGCACCCTTCACGGGTGCGTGAATTGAAACACAACTACCAGGTGTAGCTATAACGCTCAAATACTGTCGCACCCTTCACGGGTGCGTGAATTGAAACATCGATTACGAGGGGTCTGTCACTCTCAAAAATGAAGTCGCACCCTTCACGGGTGCGTGAATTGAAACCACCTTTTACCCTGTCGGTAACCGCACCAACTCCAAGTCGCACCCTTCACGGGTGCGTGAATTGAAACCCGTTGATCAGATAGAAGAAATGTTTTCCCGCAAGTCGCACCCTTCACGGGTGCGTGAATTGAAACATCTCCACAGAATCGAAAGGTTGAGGTATCTCGTGTCGCACCCTTCACGGGTGCGTGAATTGAAACCGCTCGGTGACATTGTGTTGCAGGGTGATGATATCGTCGCACCCTTCACGGGTGCGTGAATTGAAACACCATGTGGGCGCAGGATATCGCTTTTACGACTAGTCGCACCCTTCACGGGTGCGTGAATTGAAACTGTGCTCTATTAAGGACAAGGAGTTAACAAATGGTCGCACCCTTCACGGGTGCGTGAATTGAAACATTAGAAACAATGAATCCGATAGCGGCGGCAGTGTCGCACCCTTCACGGGTGCGTGAATTGAAACAACGGATTGAGCATATATCTGCATCCAATGAGTTGTCGCACCCTTCACGGGTGCGTGAATTGAAACCAGTAGTCGTCAATGCTATCATAGTCATATGCGTGTCGCACCCTTCACGGGTGCGTGAATTGAAACCCCGATTGGAACATATCTAAGTTGGCAGACGTTCCGTCGCACCCTTCACGGGTGCGTGAATTGAAACGCATCAAGAGAGATAAAGACAGAGCACGACCGCCTGGTCGCACCCTTCACGGGTGCGTGAATTGAAACTCGTACCAACCGGAAGTGTAGTGAGCGTCGTATGGTCGCACCCTTCACGGGTGCGTGAATTGAAACCATCCATAATCAACAAGGTTTCCGAGATTCTAAGTCGCACCCTTCACGGGTGCGTGAATTGAAACGATTTATCAGATGGATTGGAAATGCAGACTGATTGTCGCACCCTTCACGGGTGCGTGAATTGAAACATGGGCATCCTATGATGTCGGTGGTTTGATAGAGTCGCACCCTTCACGGGTGCGTGAATTGAAACTAAAGTACCCACCGCCACCCCCGGCAACCTTGCTGTCGCACCCTTCACGGGTGCGTGAATTGAAACCTGCTACTACAGCGGCTATTAGATATCAACATGCGTCGCACCCTTCACGGGTGCGTGAATTGAAACACACAATCCTATGTGATTAAGCTAAGCAATTTTGCAGTCGCACCCTTCACGGGTGCGTGAATTGAAACCAAGTGTTGGGAATTTTTTAGCATTCAAGGTATGTCGCACCCTTCACGGGTGCGTGAATTGAAACTCCACACTATCACTCAACTGGAAGGTGAACCATGAGTCGCACCCTTCACGGGTGCGTGAATTGAAACGCATTAATGAGCAAAGGGCTAGGCAAGAAATTGTCGCACCCTTCACGGGTGCGTGAATTGAAACCAGCCGGATATCACCAGCGAAGCAGAGACTGTTGGTCGCACCCTTCACGGGTGCGTGAATTGAAACATATACACCGCAAAAATTAAATGGGATTATTTTTGTGTCGCACCCTTCACGGGTGCGTGAATTGAAACTAGCTATGTAAGATAAGTGGTATAGTGCGAAGCGTCGCACCCTTCACGGGTGCGTGAATTGAAACAATGGGTACCATGCCACCAAGCCTTGCGAGACGTGATGTCGCACCCTTCACGGGTGCGTGAATTGAAACAAACTGGTGGATCGGATAGGCGCTGGGCTGAATAGTCGCACCCTTCACGGGTGCGTGAATTGAAACCCTGTATCCTTGGTGTTTACAGACCAGATGAAAGTCGCACCCTTCACGGGTGCGTGAATTGAAACTTGTTATTAACAGGCATATCATACCCTCCGTTGGTCGCACCCTTCACGGGTGCGTGAATTGAAACAAACAAGTTGTGGATGAGATACCAGGAGTAGATACGTCGCACCCTTCACGGGTGCGTGAATTGAAACGGTAGCAACCCCAGAAATGAAGCTACTCTACGATAGTCGCACCCTTCACGGGTGCGTAAATTGAAACCCCACATTGATATTTCGGGGGTTTGCGAGTGGAAAGTCGCACCCTTCACGGGTGCGTGAATTGAAACCAGTCGAACAAGATACCGGCGTTGGAACTTGAACGTTGCACCCTTCACGGGTGCGTGAATTGAAACCCATTGTAGCAACGCAATCATCCCCGACACGCATGTCGCACCCTTCACAGGTGCGTGAATTGAAACCTGTACAGCCGGAGACAGCTGTTCCTGCTCACGTCGCACCCTTCACGGGTGCGTGAATTGAAACTTGCTCAGACTTGAGAGCATCTTGTAACTTCTGGTCGCACCCTTCACGGGTGCGTGAATTGAAACCGATGGCTATGACGGTAGAAGAAGAGTTGTATGTCGCACCCTTCACGGGTGCGTGAATTGAAACCCACTTGACACTCGATTGTGCGCACTATATAGGGTCGCACCCTTCACGGGTGCGTGAATTGAAACAAGAACCAGATCGAAGCAGCAAAGGTTTTGGTCAACGTCGCACCCTTCACGGGTGCGGGGTGGGTGCG

>NC_016633|1|1|3520456-3520755|PILER-CR
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AATGACCATCACCCAATAGGAACAACACCAATGAC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CTTTACGGGCAATGTGCTTTGATCGATATGCACATA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CACGTCCAGTGCTTGGAGTGATTACAAAGGTACGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CTCAGCCGTTATGACCGAAGATGTTTCACACGAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAACAACCACCAAGCGTACCAATCATTAAAATAACTAGTCGCACCCTTCACGGGTGCGTGAATTGAAACAACCACCAAGCGTACCAATCATTAAAATAACTAGTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CGCGCATTGCACCCGGTGAACTGGACAACGAAGAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CACATATTCGTAAATGAGGCACTGCTCAGGACC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ACAACTACCAGGTGTAGCTATAACGCTCAAATACT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATCGATTACGAGGGGTCTGTCACTCTCAAAAATGAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CACCTTTTACCCTGTCGGTAACCGCACCAACTCCAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CCGTTGATCAGATAGAAGAAATGTTTTCCCGCAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATCTCCACAGAATCGAAAGGTTGAGGTATCTCGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CGCTCGGTGACATTGTGTTGCAGGGTGATGATATC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ACCATGTGGGCGCAGGATATCGCTTTTACGACTA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TGTGCTCTATTAAGGACAAGGAGTTAACAAATG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATTAGAAACAATGAATCCGATAGCGGCGGCAGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AACGGATTGAGCATATATCTGCATCCAATGAGTT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CAGTAGTCGTCAATGCTATCATAGTCATATGCGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CCCGATTGGAACATATCTAAGTTGGCAGACGTTCC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	GCATCAAGAGAGATAAAGACAGAGCACGACCGCCTG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TCGTACCAACCGGAAGTGTAGTGAGCGTCGTATG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CATCCATAATCAACAAGGTTTCCGAGATTCTAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	GATTTATCAGATGGATTGGAAATGCAGACTGATT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATGGGCATCCTATGATGTCGGTGGTTTGATAGA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TAAAGTACCCACCGCCACCCCCGGCAACCTTGCT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CTGCTACTACAGCGGCTATTAGATATCAACATGC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ACACAATCCTATGTGATTAAGCTAAGCAATTTTGCA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CAAGTGTTGGGAATTTTTTAGCATTCAAGGTAT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TCCACACTATCACTCAACTGGAAGGTGAACCATGA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	GCATTAATGAGCAAAGGGCTAGGCAAGAAATT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CAGCCGGATATCACCAGCGAAGCAGAGACTGTTG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATATACACCGCAAAAATTAAATGGGATTATTTTTGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TAGCTATGTAAGATAAGTGGTATAGTGCGAAGC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AATGGGTACCATGCCACCAAGCCTTGCGAGACGTGAT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AAACTGGTGGATCGGATAGGCGCTGGGCTGAATA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CCTGTATCCTTGGTGTTTACAGACCAGATGAAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TTGTTATTAACAGGCATATCATACCCTCCGTTG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AAACAAGTTGTGGATGAGATACCAGGAGTAGATAC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	GGTAGCAACCCCAGAAATGAAGCTACTCTACGATA
GTCGCACCCTTCACGGGTGCGTAAATTGAAAC	CCCACATTGATATTTCGGGGGTTTGCGAGTGGAAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CAGTCGAACAAGATACCGGCGTTGGAACTTGAAC
GTTGCACCCTTCACGGGTGCGTGAATTGAAAC	CCATTGTAGCAACGCAATCATCCCCGACACGCAT
GTCGCACCCTTCACAGGTGCGTGAATTGAAAC	CTGTACAGCCGGAGACAGCTGTTCCTGCTCAC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TTGCTCAGACTTGAGAGCATCTTGTAACTTCTG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CGATGGCTATGACGGTAGAAGAAGAGTTGTAT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CCACTTGACACTCGATTGTGCGCACTATATAGG


>NC_016633|1|1|3520456-3523663|CRISPRCasFinder
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AATGACCATCACCCAATAGGAACAACACCAATGAC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CTTTACGGGCAATGTGCTTTGATCGATATGCACATA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CACGTCCAGTGCTTGGAGTGATTACAAAGGTACGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CTCAGCCGTTATGACCGAAGATGTTTCACACGAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AACCACCAAGCGTACCAATCATTAAAATAACTA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AACCACCAAGCGTACCAATCATTAAAATAACTA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CGCGCATTGCACCCGGTGAACTGGACAACGAAGAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CACATATTCGTAAATGAGGCACTGCTCAGGACC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ACAACTACCAGGTGTAGCTATAACGCTCAAATACT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATCGATTACGAGGGGTCTGTCACTCTCAAAAATGAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CACCTTTTACCCTGTCGGTAACCGCACCAACTCCAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CCGTTGATCAGATAGAAGAAATGTTTTCCCGCAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATCTCCACAGAATCGAAAGGTTGAGGTATCTCGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CGCTCGGTGACATTGTGTTGCAGGGTGATGATATC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ACCATGTGGGCGCAGGATATCGCTTTTACGACTA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TGTGCTCTATTAAGGACAAGGAGTTAACAAATG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATTAGAAACAATGAATCCGATAGCGGCGGCAGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AACGGATTGAGCATATATCTGCATCCAATGAGTT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CAGTAGTCGTCAATGCTATCATAGTCATATGCGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CCCGATTGGAACATATCTAAGTTGGCAGACGTTCC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	GCATCAAGAGAGATAAAGACAGAGCACGACCGCCTG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TCGTACCAACCGGAAGTGTAGTGAGCGTCGTATG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CATCCATAATCAACAAGGTTTCCGAGATTCTAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	GATTTATCAGATGGATTGGAAATGCAGACTGATT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATGGGCATCCTATGATGTCGGTGGTTTGATAGA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TAAAGTACCCACCGCCACCCCCGGCAACCTTGCT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CTGCTACTACAGCGGCTATTAGATATCAACATGC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ACACAATCCTATGTGATTAAGCTAAGCAATTTTGCA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CAAGTGTTGGGAATTTTTTAGCATTCAAGGTAT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TCCACACTATCACTCAACTGGAAGGTGAACCATGA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	GCATTAATGAGCAAAGGGCTAGGCAAGAAATT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CAGCCGGATATCACCAGCGAAGCAGAGACTGTTG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATATACACCGCAAAAATTAAATGGGATTATTTTTGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TAGCTATGTAAGATAAGTGGTATAGTGCGAAGC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AATGGGTACCATGCCACCAAGCCTTGCGAGACGTGAT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AAACTGGTGGATCGGATAGGCGCTGGGCTGAATA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CCTGTATCCTTGGTGTTTACAGACCAGATGAAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TTGTTATTAACAGGCATATCATACCCTCCGTTG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AAACAAGTTGTGGATGAGATACCAGGAGTAGATAC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	GGTAGCAACCCCAGAAATGAAGCTACTCTACGATA
GTCGCACCCTTCACGGGTGCGTAAATTGAAAC	CCCACATTGATATTTCGGGGGTTTGCGAGTGGAAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CAGTCGAACAAGATACCGGCGTTGGAACTTGAAC
GTTGCACCCTTCACGGGTGCGTGAATTGAAAC	CCATTGTAGCAACGCAATCATCCCCGACACGCAT
GTCGCACCCTTCACAGGTGCGTGAATTGAAAC	CTGTACAGCCGGAGACAGCTGTTCCTGCTCAC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TTGCTCAGACTTGAGAGCATCTTGTAACTTCTG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CGATGGCTATGACGGTAGAAGAAGAGTTGTAT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CCACTTGACACTCGATTGTGCGCACTATATAGG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AAGAACCAGATCGAAGCAGCAAAGGTTTTGGTCAAC
GTCGCACCCTTCACGGGTGCGGGGTGGGTGCG

>NC_016633|1|1|3520456-3523663|CRT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AATGACCATCACCCAATAGGAACAACACCAATGAC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CTTTACGGGCAATGTGCTTTGATCGATATGCACATA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CACGTCCAGTGCTTGGAGTGATTACAAAGGTACGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CTCAGCCGTTATGACCGAAGATGTTTCACACGAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AACCACCAAGCGTACCAATCATTAAAATAACTA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AACCACCAAGCGTACCAATCATTAAAATAACTA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CGCGCATTGCACCCGGTGAACTGGACAACGAAGAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CACATATTCGTAAATGAGGCACTGCTCAGGACC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ACAACTACCAGGTGTAGCTATAACGCTCAAATACT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATCGATTACGAGGGGTCTGTCACTCTCAAAAATGAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CACCTTTTACCCTGTCGGTAACCGCACCAACTCCAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CCGTTGATCAGATAGAAGAAATGTTTTCCCGCAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATCTCCACAGAATCGAAAGGTTGAGGTATCTCGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CGCTCGGTGACATTGTGTTGCAGGGTGATGATATC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ACCATGTGGGCGCAGGATATCGCTTTTACGACTA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TGTGCTCTATTAAGGACAAGGAGTTAACAAATG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATTAGAAACAATGAATCCGATAGCGGCGGCAGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AACGGATTGAGCATATATCTGCATCCAATGAGTT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CAGTAGTCGTCAATGCTATCATAGTCATATGCGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CCCGATTGGAACATATCTAAGTTGGCAGACGTTCC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	GCATCAAGAGAGATAAAGACAGAGCACGACCGCCTG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TCGTACCAACCGGAAGTGTAGTGAGCGTCGTATG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CATCCATAATCAACAAGGTTTCCGAGATTCTAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	GATTTATCAGATGGATTGGAAATGCAGACTGATT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATGGGCATCCTATGATGTCGGTGGTTTGATAGA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TAAAGTACCCACCGCCACCCCCGGCAACCTTGCT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CTGCTACTACAGCGGCTATTAGATATCAACATGC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ACACAATCCTATGTGATTAAGCTAAGCAATTTTGCA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CAAGTGTTGGGAATTTTTTAGCATTCAAGGTAT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TCCACACTATCACTCAACTGGAAGGTGAACCATGA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	GCATTAATGAGCAAAGGGCTAGGCAAGAAATT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CAGCCGGATATCACCAGCGAAGCAGAGACTGTTG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATATACACCGCAAAAATTAAATGGGATTATTTTTGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TAGCTATGTAAGATAAGTGGTATAGTGCGAAGC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AATGGGTACCATGCCACCAAGCCTTGCGAGACGTGAT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AAACTGGTGGATCGGATAGGCGCTGGGCTGAATA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CCTGTATCCTTGGTGTTTACAGACCAGATGAAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TTGTTATTAACAGGCATATCATACCCTCCGTTG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AAACAAGTTGTGGATGAGATACCAGGAGTAGATAC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	GGTAGCAACCCCAGAAATGAAGCTACTCTACGATA
GTCGCACCCTTCACGGGTGCGTAAATTGAAAC	CCCACATTGATATTTCGGGGGTTTGCGAGTGGAAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CAGTCGAACAAGATACCGGCGTTGGAACTTGAAC
GTTGCACCCTTCACGGGTGCGTGAATTGAAAC	CCATTGTAGCAACGCAATCATCCCCGACACGCAT
GTCGCACCCTTCACAGGTGCGTGAATTGAAAC	CTGTACAGCCGGAGACAGCTGTTCCTGCTCAC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TTGCTCAGACTTGAGAGCATCTTGTAACTTCTG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CGATGGCTATGACGGTAGAAGAAGAGTTGTAT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CCACTTGACACTCGATTGTGCGCACTATATAGG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AAGAACCAGATCGAAGCAGCAAAGGTTTTGGTCAAC
GTCGCACCCTTCACGGGTGCGGGGTGGGTGCG

>NC_016633|1|2|3520854-3523595|PILER-CR
	AATGACCATCACCCAATAGGAACAACACCAATGAC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CTTTACGGGCAATGTGCTTTGATCGATATGCACATA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CACGTCCAGTGCTTGGAGTGATTACAAAGGTACGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CTCAGCCGTTATGACCGAAGATGTTTCACACGAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAACAACCACCAAGCGTACCAATCATTAAAATAACTAGTCGCACCCTTCACGGGTGCGTGAATTGAAACAACCACCAAGCGTACCAATCATTAAAATAACTAGTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CGCGCATTGCACCCGGTGAACTGGACAACGAAGAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CACATATTCGTAAATGAGGCACTGCTCAGGACC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ACAACTACCAGGTGTAGCTATAACGCTCAAATACT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATCGATTACGAGGGGTCTGTCACTCTCAAAAATGAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CACCTTTTACCCTGTCGGTAACCGCACCAACTCCAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CCGTTGATCAGATAGAAGAAATGTTTTCCCGCAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATCTCCACAGAATCGAAAGGTTGAGGTATCTCGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CGCTCGGTGACATTGTGTTGCAGGGTGATGATATC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ACCATGTGGGCGCAGGATATCGCTTTTACGACTA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TGTGCTCTATTAAGGACAAGGAGTTAACAAATG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATTAGAAACAATGAATCCGATAGCGGCGGCAGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AACGGATTGAGCATATATCTGCATCCAATGAGTT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CAGTAGTCGTCAATGCTATCATAGTCATATGCGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CCCGATTGGAACATATCTAAGTTGGCAGACGTTCC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	GCATCAAGAGAGATAAAGACAGAGCACGACCGCCTG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TCGTACCAACCGGAAGTGTAGTGAGCGTCGTATG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CATCCATAATCAACAAGGTTTCCGAGATTCTAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	GATTTATCAGATGGATTGGAAATGCAGACTGATT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATGGGCATCCTATGATGTCGGTGGTTTGATAGA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TAAAGTACCCACCGCCACCCCCGGCAACCTTGCT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CTGCTACTACAGCGGCTATTAGATATCAACATGC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ACACAATCCTATGTGATTAAGCTAAGCAATTTTGCA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CAAGTGTTGGGAATTTTTTAGCATTCAAGGTAT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TCCACACTATCACTCAACTGGAAGGTGAACCATGA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	GCATTAATGAGCAAAGGGCTAGGCAAGAAATT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CAGCCGGATATCACCAGCGAAGCAGAGACTGTTG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	ATATACACCGCAAAAATTAAATGGGATTATTTTTGT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TAGCTATGTAAGATAAGTGGTATAGTGCGAAGC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AATGGGTACCATGCCACCAAGCCTTGCGAGACGTGAT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AAACTGGTGGATCGGATAGGCGCTGGGCTGAATA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CCTGTATCCTTGGTGTTTACAGACCAGATGAAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TTGTTATTAACAGGCATATCATACCCTCCGTTG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	AAACAAGTTGTGGATGAGATACCAGGAGTAGATAC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	GGTAGCAACCCCAGAAATGAAGCTACTCTACGATA
GTCGCACCCTTCACGGGTGCGTAAATTGAAAC	CCCACATTGATATTTCGGGGGTTTGCGAGTGGAAA
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CAGTCGAACAAGATACCGGCGTTGGAACTTGAAC
GTTGCACCCTTCACGGGTGCGTGAATTGAAAC	CCATTGTAGCAACGCAATCATCCCCGACACGCAT
GTCGCACCCTTCACAGGTGCGTGAATTGAAAC	CTGTACAGCCGGAGACAGCTGTTCCTGCTCAC
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	TTGCTCAGACTTGAGAGCATCTTGTAACTTCTG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CGATGGCTATGACGGTAGAAGAAGAGTTGTAT
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC	CCACTTGACACTCGATTGTGCGCACTATATAGG
GTCGCACCCTTCACGGGTGCGTGAATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_016633.1\|WP_014271803.1\|3514835_3515540_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09651_cas5_CAS-I-C	gnl\|CDD\|187782
NC_016633.1\|WP_014271806.1\|3518263_3518941_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|273040
NC_016633.1\|WP_041384750.1\|3529662_3530151_+\|hypothetical-protein	unknown	unknown	unknown
NC_016633.1\|WP_014271807.1\|3518933_3519965_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NC_016633.1\|WP_014271800.1\|3510853_3511102_+\|TIGR03905-family-TSCPD-domain-containing-protein	unknown	unknown	gnl\|CDD\|378896
NC_016633.1\|WP_014271809.1\|3523792_3524803_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NC_016633.1\|WP_014271815.1\|3530231_3530435_+\|hypothetical-protein	unknown	unknown	unknown
NC_016633.1\|WP_014271805.1\|3517304_3518180_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NC_016633.1\|WP_014271812.1\|3526804_3527674_+\|YicC-family-protein	unknown	unknown	gnl\|CDD\|236993
NC_016633.1\|WP_014271801.1\|3511098_3512172_+\|hypothetical-protein	unknown	unknown	unknown
NC_016633.1\|WP_014271816.1\|3530397_3531360_+\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl\|CDD\|234626
NC_016633.1\|WP_014271799.1\|3509280_3510759_-\|UDP-N-acetylmuramyl-tripeptide-synthetase	unknown	unknown	gnl\|CDD\|273435
NC_016633.1\|WP_014271817.1\|3532160_3534266_+\|chitobiase/beta-hexosaminidase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379107
NC_016633.1\|WP_014271811.1\|3525326_3526808_+\|UDP-N-acetylmuramate--alanine-ligase	unknown	unknown	gnl\|CDD\|234757
NC_016633.1\|WP_014271804.1\|3515536_3517294_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NC_016633.1\|WP_155816868.1\|3512677_3514822_+\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NC_016633.1\|WP_172635104.1\|3528400_3529441_-\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|173833
NC_016633.1\|WP_014271808.1\|3519968_3520259_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NC_016633.1\|WP_014271813.1\|3527684_3528206_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|235244
NC_016633.1\|WP_014271810.1\|3525072_3525246_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_016633.1\|WP_014271803.1\|3514835_3515540_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187782	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	9.61418e-95
NC_016633.1\|WP_014271806.1\|3518263_3518941_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	3.08029e-28
NC_016633.1\|WP_014271807.1\|3518933_3519965_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NC_016633.1\|WP_014271800.1\|3510853_3511102_+\|TIGR03905-family-TSCPD-domain-containing-protein	gnl\|CDD\|378896	pfam12637, TSCPD, TSCPD domain. This family of proteins is found in bacteria, archaea and viruses. The domain is found in isolation in many proteins where it has a conserved C-terminal motif TSCPD after which the domain is named. Most copies of the domain possess 4 conserved cysteines that may be part of an Iron-sulfur cluster. This domain is found at the C-terminus of some ribonucleoside-diphosphate reductase enzymes.	2.18615e-32
NC_016633.1\|WP_014271809.1\|3523792_3524803_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	5.74998e-26
NC_016633.1\|WP_014271805.1\|3517304_3518180_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	3.05292e-151
NC_016633.1\|WP_014271812.1\|3526804_3527674_+\|YicC-family-protein	gnl\|CDD\|236993	PRK11820, PRK11820, YicC family protein.	2.84142e-94
NC_016633.1\|WP_014271816.1\|3530397_3531360_+\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	1.84211e-120
NC_016633.1\|WP_014271799.1\|3509280_3510759_-\|UDP-N-acetylmuramyl-tripeptide-synthetase	gnl\|CDD\|273435	TIGR01085, UDP-N-acetylmuramyl-tripeptide_synthetase, UDP-N-acetylmuramyl-tripeptide synthetase. Most members of this family are EC 6.3.2.13, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase. An exception is Staphylococcus aureus, in which diaminopimelate is replaced by lysine in the peptidoglycan and MurE is EC 6.3.2.7. The Mycobacteria, part of the closest neighboring branch outside of the low-GC Gram-positive bacteria, use diaminopimelate. A close homolog, scoring just below the trusted cutoff, is found (with introns) in Arabidopsis thaliana. Its role is unknown. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	2.47633e-122
NC_016633.1\|WP_014271817.1\|3532160_3534266_+\|chitobiase/beta-hexosaminidase-C-terminal-domain-containing-protein	gnl\|CDD\|379107	pfam13290, CHB_HEX_C_1, Chitobiase/beta-hexosaminidase C-terminal domain.	1.05365e-19
NC_016633.1\|WP_014271811.1\|3525326_3526808_+\|UDP-N-acetylmuramate--alanine-ligase	gnl\|CDD\|234757	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional.	6.43448e-112
NC_016633.1\|WP_014271804.1\|3515536_3517294_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NC_016633.1\|WP_155816868.1\|3512677_3514822_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	9.16299e-60
NC_016633.1\|WP_172635104.1\|3528400_3529441_-\|polyprenyl-synthetase-family-protein	gnl\|CDD\|173833	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail. These trans-Isoprenyl Diphosphate Synthases (Trans_IPPS) catalyze head-to-tail (HT) (1'-4) condensation reactions. This CD includes all-trans (E)-isoprenyl diphosphate synthases which synthesize various chain length (C10, C15, C20, C25, C30, C35, C40, C45, and C50) linear isoprenyl diphosphates from precursors, isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). They catalyze the successive 1'-4 condensation of the 5-carbon IPP to allylic substrates geranyl-, farnesyl-, or geranylgeranyl-diphosphate. Isoprenoid chain elongation reactions proceed via electrophilic alkylations in which a new carbon-carbon single bond is generated through interaction between a highly reactive electron-deficient allylic carbocation and an electron-rich carbon-carbon double bond. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions (DDXX(XX)D) located on opposite walls. These residues mediate binding of prenyl phosphates via bridging Mg2+ ions, inducing proposed conformational changes that close the active site to solvent, protecting and stabilizing reactive carbocation intermediates. Farnesyl diphosphate synthases produce the precursors of steroids, cholesterol, sesquiterpenes, farnsylated proteins, heme, and vitamin K12; and geranylgeranyl diphosphate and longer chain synthases produce the precursors of carotenoids, retinoids, diterpenes, geranylgeranylated chlorophylls, ubiquinone, and archaeal ether linked lipids. Isoprenyl diphosphate synthases are widely distributed among archaea, bacteria, and eukareya.	1.93438e-65
NC_016633.1\|WP_014271808.1\|3519968_3520259_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.40888e-29
NC_016633.1\|WP_014271813.1\|3527684_3528206_+\|AAA-family-ATPase	gnl\|CDD\|235244	PRK04182, PRK04182, cytidylate kinase; Provisional.	2.53012e-69

>NC_016633.1|WP_014271808.1|3519968_3520259_+|CRISPR-associated-endonuclease-Cas2
MMVLVSYDIMVSSEDGPKRLRRIAKECTNYGQRVQFSVFECIVEPAQWIFLKHKLESIMDKEKDSLRYYYLGANWTRKIEHVGVKESIDLQGPIIV
>NC_016633.1|WP_014271807.1|3518933_3519965_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MIKLLNTLYVSSQGSYLRKEGETVVVELATKKVLQIPIHTIKGIVCFGNVLCSPFLLGFCSEKNVSVSFMTEYGRFLASVRGPVSGNVLLRRQQYRFADDSEISTIIVKNLVSAKIVNCRIVLNRAMRDHGTKFDIKKMKESSISMDRAVSQVLSATSVDEVRGYEGLAAAEYFSVFNDLIVSQKEDFIFQTRNRRPPLDEVNALLSFIYTLLSHDVRSALETVGLDPSVGFLHCDRSGRYGLALDMMEEFRPVIADRLVLSLINRGQVKKNGFYKAINGAITMDDDTRKLVLVEYQKRKQEQIHHPFINEDIQIGLLFHVQATLLARYIRGDIDGYPPFFWR
>NC_016633.1|WP_014271806.1|3518263_3518941_+|CRISPR-associated-protein-Cas4
MFDERDLLPISSIQHLLYCERQFALIHLEGLWDENRFTVEGDILHERVDMIHHESRKLFYQEYSLNIRSMEIGLVGICDLVEVLYTPNREIETICPVEFKRGSAKQTDVDLVQLCAQAICLEEIFAIKIPKGQIFYLQDHRRVDVLFDNCLITKTKGLVRRAQELLKGSFTPLPVYHPKLCDACSLKEICCPKIISSRQLAVSDYVKSQISFNRMEYITEGLSND
>NC_016633.1|WP_014271805.1|3517304_3518180_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MELQKRYDFILLFDVRDGNPNGDPDAGNLPRIDPETGNGLVTDVCIKRKIRNYVDIVKGNQPPYEIYIKEKAILNNSNKRAFEALGVDLAKDTSKRKGGDKTEEAKLWMCKNFFDIRTFGAVMTTKINCGQVRGPVQFTFARSIDPVIAAEHSITRMAVTTEEEAEKQSGDNRTMGRKYTIPYGLYQIHGFISPHLARQTGFDTDDLELLWDSLLNMFDYDRSAARGFMSTQRLIIFEHSSLLGDKPAQDLFARVSVERKTDQDKPARSFSDYKVTLDGQLLDNKKNIIPV
>NC_016633.1|WP_014271804.1|3515536_3517294_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILQALSEYYYRLDGNGKDLIAPLGWEKKEIPFIFVLDEQGSLLNVEDTREGEGNKKLAKTFLVPQGVKKTSGVAANLLWDTVGYVTGYLDTKKMSETQAKKKIERLPKEHQAFIERIETELIDSPKKSALIHFLHSISLDDLRSFPCWEEIAVVNPNVSFRFSQDLQLYCQNNEVKKALAKIEPKKNDATQQVCLVSGEKDSICTLHTAIKGVYGAQSSGANIVSFNLSPFNSYGKKQGENAPISEKAMFTYTTALNTLLGKNSKQRMQIGDASTVFWAGRMNQFEKDFLKFFAEPSKDDPNANTQSIRSLMDSPKTGEYYADSCEDPFYVLGLSPNAARISIRFWFNGIVSDFSKRIRVYFEDLAIVKPPNEPEYYSIWRLLVNIAVQGKSENIPPNISSDFMRSILMGTPYPQSLLQMTLRRIKNDGENRVPPVRAALLKAILNRNLRLYPKQNQKELDMSLDIDQPSIGYQLGRLFSTLTKIQEEANPGINASIADRYYGSACSTPVSVFGTLMRLMRHHLAKIENPGRRIQLERQINEIVSHIDEFPAHLNLNEQGRFAVGYYHQRQAFFTKKETELSDK
>NC_016633.1|WP_014271803.1|3514835_3515540_+|type-I-C-CRISPR-associated-protein-Cas5
MDDWILEVWGDYACFTRPEMKVERVSYDVITPSAARAIFEAIFWKPAIVWHITKIEVLNPIKWVSVRRNEIGKIASMPSKSQMEGTVEEMPEIIIEENRQQRASMILCDVHYRIHAYFEYLPPEVRNTTSSESEDDRTDESPAKYAAMFDRRARKGQYFHHPYLGCREFACYFSLIDSSTSSQGKKPIATDQDLGWMLYDMDFSKNDFPTPTFFKARMVQGCIDTDARTLEVLS
>NC_016633.1|WP_155816868.1|3512677_3514822_+|CRISPR-associated-helicase-Cas3'
MASDFSAEFCSSSWGYEAGINHDTGKGTDEWQEYIRQQSGYESPDSDGKNSRLDHSSPSSKLVEQKIPGISGRILSYLISGHHTGLPDWEGSQSSLHFRLQQTKIDGIHAEYRKSDNLESRLTPPWQFPTTGLDISLWMRMVFSSLVDADFLDTESYMDSSASALRSSYLPFSVLISMFEQYMQNLVTQVSIKKDTPIYKVRQLVLKDCKNAAKKAPGMFSLTVPTGGGKTLASLAFALSHIEIYAKKRIIYVIPYTSIIEQTANIFKQIFGEDQVIEHHSNFDMSLSSQKVRLASENWDAPIIVTTSVQFLESLFASKPSRCRKLHNIANSVVIFDEVQLLPIEYLKPILESLELICSHYKTTTLFCTATQPAFEKQDDFPQFPGFAKGKVREIIQDVPFLYKALRRVELQSVDINTIRSFESIAFELTTYERVLCIVSDRKSCRELHALMPVGTYHLSALMCPEHRSDIIAEIKEKLKGNGPVRVISTQLIEAGVDIDFPVVYRSIAGFDSIAQAAGRCNREGVLEKGKLVVFVSPRRPPVGILRKATDASISLLNEGFYDFLDPSLYRNYFSRLYWLANSFDAKGIVDLLEISDPKNLGIQFRTASEQCKIIDDSNMVSIFVPYCKGSKLLEELTSGGPYEKDNKNYRAIFRKLQRYSVSIYKNEYTKLLRRGSLVEVFPEVYALNSMVEYDFQKGLLVDETCQNPETFMV
>NC_016633.1|WP_014271801.1|3511098_3512172_+|hypothetical-protein
MKKRFVLGCVLTFCLASLGSSPLDRTDLSSIGSGSAGLALTSSTSFFANPAALYFRDVTDSSFYVSGSYKDYMVPTNFSNGEPNPFVDSPVSDFCVSFSGRSLALTLESQTSLSDRTVFADYTTYVAKSSTLFQLDWAVGSNKIAFGLSLRAVSFSERSPILVRDAYTVGDYFVETVLGKYETLEEDAIVSAGLGLLLNYDWFKMGVTSDAFAYAQGDDSLAISSESLFKTLRWGFALSSPTYDSTNQLNLFKIESALDLCNIGDLETREVRFGLDIKLQLLPFWSVSLNNGYREIKPDIGDFFAIVPENGIHTIGLEIQLNRVSLDLACSIPLDWYLGTKDDDSSVAITLAMSFAV
>NC_016633.1|WP_014271800.1|3510853_3511102_+|TIGR03905-family-TSCPD-domain-containing-protein
MKTYTYKPQGVCSRGITVTVDERNIITDIHIEGGCEGNHSGIIALCLGQEASVVVTKLEGITCGKRKTSCPDQLAKALKAVS
>NC_016633.1|WP_014271799.1|3509280_3510759_-|UDP-N-acetylmuramyl-tripeptide-synthetase
MEKLADLLNATGLDGSIVDSNLCLTSLCYDSRQCKPDCAFFAFDGIHTDGQNYIPQAIENGAICIISKTEPKDKQQGIYYFQTPNPRSLFANMCAAFYDYPAKKLILIGITGTDGKSTTCDYLHQILTKHGIKTGLLGTVSMDDGKKKQISPYRQSTPEADSLQQFLSRCADNGLTHVILECTSHALSKEYDRLATLTYDVAIVTTVTSEHMEFHKTHSAYVDAKCNLVRNLKKNGKFISTTDNPSLQAFLSCLTKDKEACILHRDIQCTIEKKEAGQVLCTVGNKTVALSCVLPCLASNAMLAALGASYLLHTPFTTLFPSLEELQPVTGRMNTIENPFGLQIFIDFAHTADAYEKLFSSFATEHERGKLIAVFGCAGERDTSKRAPMGYIAATYADILILTEEDPRKEGNEAIFSDLLSLVTEVGDKNLIIEKIPDRKKAIERAFSLSHNGDTLLFLGKGHETSIERAEGKIPWNEEEQVRIALHTYQKA
>NC_016633.1|WP_014271809.1|3523792_3524803_+|IS30-family-transposase
MGRRNLTLGKHCRGSHFSWGERLKLQYYFAGSNGYRKERSPTVLGMIFQKSAKTIGRELQRGMVEHVLGEIPFSRAEYNADHAQIDAEEKMKYKGPLPKSGRHYALVQRISPLILKDKYSPYAVLKTLDKDEEWPEGLRICEKTLYNWIEAGDIPGVTIENLPRRGKVKHNKGHGGKRKHSNAEFAARSIEHRPREILRRLVAGHWEGDTVYSRKNGSKECLLTLVERSTRMELILKIPDRTAKSVKEAFDKLERQLGSRLFRLIFLSVTFDNGSEFSDVLGLEKSILTKGTRTVLYCISPIPIVPVKEALTRTTTASSEDSFPKERTSPSSRLRK
>NC_016633.1|WP_014271810.1|3525072_3525246_+|hypothetical-protein
MSKAHRGSGIRTEVNHGRGVCPVCKRTAVKVLYEATVEGEKAKVCKSCNASLKAAAK
>NC_016633.1|WP_014271811.1|3525326_3526808_+|UDP-N-acetylmuramate--alanine-ligase
MNFSAKKVYLVGIKGTGMASLAVLLHKTGANVSGCDSPEIFSTDTLLAENKIPVISGFSISSLPSSTNIVIHSSAYQRTLPILQEAERIGLEIYSYPEFLALLSKESDSYAVAGTHGKTTTTAVASYLLASLGFHDFPFYSIYGSNLQGESSLPYQGSEVALFEACEYQDHFLSYSLRGALVTNVDFDHPDYFHDLAHVQESFEKFVVNIRPNGFLICCNDDPGSKKLAQYCRDRRPDITLMTYGFNDNGPFWITKNHWDGTYSLSCLGGRYFVLPPLSEPLLDDYIGGAVLALAIMLDRPQVKLYLDDSQIISEEAIPSVAGMLTERLVSFPGCVGRSEVMLEEGGITYIDDYAHHPMEIKATIDMLHIKYPKRPLAVLFCPHTASRTKALLKDFVIALSLADKVVIQHSYASARNDTDLSEDPAILLEKALSTHIMRTYRCHLQTVSYAPDDKTAVSIMSVQLQPGDLCITMGAGNNRLLGPEIAQARRSL
>NC_016633.1|WP_014271812.1|3526804_3527674_+|YicC-family-protein
MKSMTGYGSAETMNEKFQLSVEIKSYNNRFLDINHNIPFFLSPFEMDIDKAVATVASRGHVEVNVRVKSLVSDMEIVVDTQAVERYRDAFAQIAALSGKALKPELSDFLAAEGVMTSVRQGDSEMYRQPLFSVLDEALAQFAQSKEREGNSTKADLTAMGKIVEEGLSVVSAHAGELEELVKTNLRNRFEEMLGDQNYDENRILQEVAVMLVKYSVNEEIKRLAVHLKEYFKLLNQNEPVGKRLDFLCQEMNREINTIGSKSQMVEMNLQVVRMKDGLENIREQIRNIE
>NC_016633.1|WP_014271813.1|3527684_3528206_+|AAA-family-ATPase
MRIAISGKSGCGNTTVSTLVSQALDYPLINFTFRNLANEKHMDFWDFCKLAEQSDEYDKELDTRQVEMAMAQKDCVLGSRLAIWMLEQADLKVYLTASAQERASRVYKREGGSFEERLAQTMMRDKNDSARYQRIYGIDNSDTAFADLVIDTSDKDPIQVAKIIIAEVKKRLA
>NC_016633.1|WP_172635104.1|3528400_3529441_-|polyprenyl-synthetase-family-protein
MQHWLNQIETELNRIFPASFDQKWIDWMLDCSTLGADKNVFNHFCEPAKDLLARGGKRWRPLLMMLTAKMLGGEPALELAEKLVSLIEMPHNGTLIIDDIEDKSDLRRGKPAVHLMYGEDISINAGNLLYFLPTKAIDESLVEDTVKLRIYQIYAKYMRRVHLGQGMDISWHHDNTKTPTLEEYELMCRLKTGCLAAMGSEVGAALAVDDMNIIRKAGHIAETIGVGFQILDDVINLEKGNPGKRQGDDIVENKKSLPIILYANANPDQNEHLFSVFQFAQSSGYEKASDSIIALIKKIKDSGALEKAKGRAFELFGQAFDEIHELYPPSSERDFLIAMIKDFMTA
>NC_016633.1|WP_041384750.1|3529662_3530151_+|hypothetical-protein
MKKVLLTALFICMGLTLFASPYIGVSQGLGATSVELGFMTSSFEENIFVGIPSLMAMDSYNSDFYKTVVVGTDLIYRFRPIGPLVIGFGPTFRAAWETGNAFSLMAGVAYQLSLETPDVMDILYVEGAYIPDFMQYESGTVTNDFLDKAAKQIFRLGWRHAF
>NC_016633.1|WP_014271815.1|3530231_3530435_+|hypothetical-protein
MSIPLNKLIDYKGNVYEITCVAIKEAIILSNPGCGGKEIEENNGKIVSEVLSRALNGEIHFIPTDEQ
>NC_016633.1|WP_014271816.1|3530397_3531360_+|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MARFTSSQLTSNSSYNPVIFLFGPTGVGKTELLLNLFKDRFSVVNADSIQVYRHLDIGSAKASKQIQEKIPHYLIDIFDPWEQFSVGDFIELADKACEEIRAQGRIPILSGGTAYYFKHFLYGLSEAPASDEHIRARVAQELEEKGGVWAYARLCEIDPVYANKIHPSDLYRISRALEVFETSGRPLSSYVIPSTYRNNMHPLILGLHREKQELKERIIARVQQMFDEGLIEEIRTILQMGGKSEWPGLQGIGYKEFFQAMESGEVSLPMIADQIAKNSRSYAKRQMTFFKSFAEVNWMQPDDQEAIAEMVAAYLAKETF
>NC_016633.1|WP_014271817.1|3532160_3534266_+|chitobiase/beta-hexosaminidase-C-terminal-domain-containing-protein
MNRRSSFSGFLFLCFAMLIAITLIVGCESNIQNKVGSLTVSTGAQEKTISPDSTLIEIASYQVRGVYSDGVTTFSQQSPINTIVINDLLVGDWTITFEGLNSFGTVIASATQMVTINAGYNTTVTFVLTSVSGVGTCELTLSWPVTVTSVHRITVRLTAASSMDVFDVEAFAFEATQVGDIQQIMKTIADIPVGSYALKAQFWDVFDAQIGLTLMETVNIYADMTSTGLFALPEFLFPVEKPTFDPMGGRITPEQTIELTTASIGATIYYTIDGTDPNTTSIEYEGPFTLPHNATVKAIALKNCMFASAIASAVFEIPAAMPTILPVSGTYSMPQEVTLFTETAGATIYYTTDGSAPDTFSILYTGPFMVSQDTTVRAIATHPDFGVSEEVSAEYIIVNSVGLVTVDPANYTVEIIVPPEWTGGPVITNVWARIWADVEPDPTGVTYTWYLDGEEARNQGGEIASTSDYLDLGIGLDRVAIGPGPHSITVTVTAGELSFSDYYWFCASDTATIGASSFAIGDVGPAGGLVFYDDEEDGIDDLPGYRYLEAAPEETEWENRQWGAYGYSVDPSALGTALGYGMPNTENIVSYHDSLGTLYPLKGDYYTNPGAYYFKNDGSVAAKLCADLEYGGYDDWFLPSKGELDLMFTIIRKCCPSDWCEHSYWSSSEFSPTCAWLQSFAWSQWKSPKFENHRVKAVRAF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_016633_1	1.12\|3521221\|34\|NC_016633\|CRISPRCasFinder,CRT,PILER-CR	3521221-3521254	34	NC_031944	Synechococcus phage S-WAM1 isolate 0810PA09, complete genome	177319-177352	8	0.765
NC_016633_1	1.19\|3521682\|34\|NC_016633\|CRISPRCasFinder,CRT,PILER-CR	3521682-3521715	34	NC_009036	Shewanella baltica OS155 plasmid pSbal02, complete sequence	57715-57748	10	0.706
NC_016633_1	1.19\|3521682\|34\|NC_016633\|CRISPRCasFinder,CRT,PILER-CR	3521682-3521715	34	NC_009036	Shewanella baltica OS155 plasmid pSbal02, complete sequence	27457-27490	10	0.706
NC_016633_1	1.19\|3521682\|34\|NC_016633\|CRISPRCasFinder,CRT,PILER-CR	3521682-3521715	34	NC_017577	Shewanella baltica OS117 plasmid pSBAL11701, complete sequence	86136-86169	10	0.706
NC_016633_1	1.19\|3521682\|34\|NC_016633\|CRISPRCasFinder,CRT,PILER-CR	3521682-3521715	34	NC_017578	Shewanella baltica OS117 plasmid pSBAL11703, complete sequence	22962-22995	10	0.706
NC_016633_1	1.19\|3521682\|34\|NC_016633\|CRISPRCasFinder,CRT,PILER-CR	3521682-3521715	34	NC_017578	Shewanella baltica OS117 plasmid pSBAL11703, complete sequence	63814-63847	10	0.706
NC_016633_1	1.19\|3521682\|34\|NC_016633\|CRISPRCasFinder,CRT,PILER-CR	3521682-3521715	34	NC_017580	Shewanella baltica OS117 plasmid pSBAL11702, complete sequence	19211-19244	10	0.706
NC_016633_1	1.19\|3521682\|34\|NC_016633\|CRISPRCasFinder,CRT,PILER-CR	3521682-3521715	34	NC_017580	Shewanella baltica OS117 plasmid pSBAL11702, complete sequence	20759-20792	10	0.706
NC_016633_1	1.42\|3523206\|34\|NC_016633\|CRISPRCasFinder,CRT,PILER-CR	3523206-3523239	34	NZ_CP045549	Streptomyces sp. SYP-A7193 plasmid unnamed2, complete sequence	107042-107075	10	0.706
NC_016633_1	1.13\|3521287\|34\|NC_016633\|CRISPRCasFinder,CRT,PILER-CR	3521287-3521320	34	HQ633071	Synechococcus phage S-SKS1 genomic sequence	87333-87366	11	0.676

1. spacer 1.12|3521221|34|NC_016633|CRISPRCasFinder,CRT,PILER-CR matches to NC_031944 (Synechococcus phage S-WAM1 isolate 0810PA09, complete genome) position: , mismatch: 8, identity: 0.765

ccgttgatcagatagaagaaatgttttcccgcaa	CRISPR spacer
ttgttcctatgatagaagaaatcttttcacgcaa	Protospacer
..***  *  ************ ***** *****

2. spacer 1.19|3521682|34|NC_016633|CRISPRCasFinder,CRT,PILER-CR matches to NC_009036 (Shewanella baltica OS155 plasmid pSbal02, complete sequence) position: , mismatch: 10, identity: 0.706

cagtagtcgtcaatgctatcatagtcatatgcgt	CRISPR spacer
tcatactcgtcaatgctatcaaagtcacttgaac	Protospacer
. .** *************** *****. ** ..

3. spacer 1.19|3521682|34|NC_016633|CRISPRCasFinder,CRT,PILER-CR matches to NC_009036 (Shewanella baltica OS155 plasmid pSbal02, complete sequence) position: , mismatch: 10, identity: 0.706

cagtagtcgtcaatgctatcatagtcatatgcgt	CRISPR spacer
tcatactcgtcaatgctatcaaagtcacttgaac	Protospacer
. .** *************** *****. ** ..

4. spacer 1.19|3521682|34|NC_016633|CRISPRCasFinder,CRT,PILER-CR matches to NC_017577 (Shewanella baltica OS117 plasmid pSBAL11701, complete sequence) position: , mismatch: 10, identity: 0.706

cagtagtcgtcaatgctatcatagtcatatgcgt	CRISPR spacer
tcatactcgtcaatgctatcaaagtcacttgaac	Protospacer
. .** *************** *****. ** ..

5. spacer 1.19|3521682|34|NC_016633|CRISPRCasFinder,CRT,PILER-CR matches to NC_017578 (Shewanella baltica OS117 plasmid pSBAL11703, complete sequence) position: , mismatch: 10, identity: 0.706

cagtagtcgtcaatgctatcatagtcatatgcgt	CRISPR spacer
tcatactcgtcaatgctatcaaagtcacttgaac	Protospacer
. .** *************** *****. ** ..

6. spacer 1.19|3521682|34|NC_016633|CRISPRCasFinder,CRT,PILER-CR matches to NC_017578 (Shewanella baltica OS117 plasmid pSBAL11703, complete sequence) position: , mismatch: 10, identity: 0.706

cagtagtcgtcaatgctatcatagtcatatgcgt	CRISPR spacer
tcatactcgtcaatgctatcaaagtcacttgaac	Protospacer
. .** *************** *****. ** ..

7. spacer 1.19|3521682|34|NC_016633|CRISPRCasFinder,CRT,PILER-CR matches to NC_017580 (Shewanella baltica OS117 plasmid pSBAL11702, complete sequence) position: , mismatch: 10, identity: 0.706

cagtagtcgtcaatgctatcatagtcatatgcgt	CRISPR spacer
tcatactcgtcaatgctatcaaagtcacttgaac	Protospacer
. .** *************** *****. ** ..

8. spacer 1.19|3521682|34|NC_016633|CRISPRCasFinder,CRT,PILER-CR matches to NC_017580 (Shewanella baltica OS117 plasmid pSBAL11702, complete sequence) position: , mismatch: 10, identity: 0.706

cagtagtcgtcaatgctatcatagtcatatgcgt	CRISPR spacer
tcatactcgtcaatgctatcaaagtcacttgaac	Protospacer
. .** *************** *****. ** ..

9. spacer 1.42|3523206|34|NC_016633|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045549 (Streptomyces sp. SYP-A7193 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

cagtcgaacaagataccggcgttggaacttgaac	CRISPR spacer
cagtcgaagaagatcccggcgttgcgctcggaga	Protospacer
******** ***** ********* . .. **.

10. spacer 1.13|3521287|34|NC_016633|CRISPRCasFinder,CRT,PILER-CR matches to HQ633071 (Synechococcus phage S-SKS1 genomic sequence) position: , mismatch: 11, identity: 0.676

atctccacagaatcgaaaggttgaggtatctcgt	CRISPR spacer
ttggacacagaaccgaaaggttgtggtatactaa	Protospacer
 *   *******.********** ***** ...

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1777016 : 1799372

uncultured_virus(28.57%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014270281.1\|1777016_1777823_-\|transposase	transposase	NA	NA	NA	NA
WP_041384524.1\|1777826_1778234_-	DNA-processing protein DprA	NA	NA	NA	NA
WP_041384525.1\|1778212_1778947_-	DNA-processing protein DprA	NA	NA	NA	NA
WP_014270283.1\|1778939_1780478_-	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA
WP_014270284.1\|1780937_1782152_+	ATP-binding protein	NA	NA	NA	NA
WP_155816686.1\|1782260_1782488_+	hypothetical protein	NA	NA	NA	NA
WP_014270285.1\|1782530_1783124_+	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	NA	NA	NA	NA
WP_014270286.1\|1783116_1783953_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_014270287.1\|1783964_1784549_+	hypothetical protein	NA	NA	NA	NA
WP_014270288.1\|1784532_1785201_+	hypothetical protein	NA	NA	NA	NA
WP_014270289.1\|1785267_1785543_+	hypothetical protein	NA	NA	NA	NA
WP_014270290.1\|1785685_1786123_-	protein-export chaperone SecB	A0A2D1GPE1	Lactobacillus_phage	2.1e-05	38.8
WP_014270291.1\|1786125_1786443_-	hypothetical protein	NA	NA	NA	NA
WP_014270292.1\|1786439_1786850_-	hypothetical protein	NA	NA	NA	NA
WP_172635078.1\|1787393_1788758_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	5.2e-34	26.9
WP_172635079.1\|1788864_1789125_+	hypothetical protein	NA	NA	NA	NA
WP_014270294.1\|1789149_1789491_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.5e-17	44.2
WP_014270295.1\|1789480_1789855_-\|transposase	transposase	NA	NA	NA	NA
WP_172635078.1\|1790368_1791733_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	5.2e-34	26.9
WP_172635079.1\|1791839_1792100_+	hypothetical protein	NA	NA	NA	NA
WP_014270294.1\|1792124_1792466_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.5e-17	44.2
WP_014270295.1\|1792455_1792830_-\|transposase	transposase	NA	NA	NA	NA
WP_041384529.1\|1793344_1794436_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	7.2e-26	28.3
WP_041385180.1\|1794437_1795658_-	nucleotide sugar dehydrogenase	A0A127AXI2	Bacillus_phage	2.2e-31	29.7
WP_014270298.1\|1796058_1797369_-	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_155816823.1\|1797419_1797881_-	acyltransferase	NA	NA	NA	NA
WP_014270300.1\|1798221_1798710_+	hypothetical protein	NA	NA	NA	NA
WP_172635080.1\|1798745_1799372_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

2910894 : 2919345

Synechococcus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041384692.1\|2910894_2912514_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	1.0e-60	28.5
WP_014271256.1\|2912544_2912955_+	C-GCAxxG-C-C family protein	NA	NA	NA	NA
WP_014271257.1\|2913135_2913627_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	1.5e-20	41.6
WP_014271258.1\|2913689_2914400_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A127KMU1	Cyanophage	4.5e-37	40.1
WP_014271259.1\|2914403_2915849_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.8e-51	31.3
WP_014271260.1\|2915845_2916880_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FC27	Synechococcus_phage	1.5e-57	40.5
WP_014271261.1\|2916873_2918163_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.2e-25	39.7
WP_014271262.1\|2918166_2919345_+	phosphoribosylaminoimidazolecarboxamide formyltransferase	Q58MG4	Prochlorococcus_phage	3.3e-08	44.4

DBSCAN-SWA_3

3034383 : 3109718

Erysipelothrix_phage(44.83%)

protease,tRNA,capsid,terminase,portal,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014271370.1\|3034383_3035613_-\|tRNA	tyrosine--tRNA ligase	NA	NA	NA	NA
WP_014271371.1\|3036211_3036484_+	hypothetical protein	NA	NA	NA	NA
WP_014271372.1\|3036605_3037316_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_014271373.1\|3037492_3038011_-	YcxB family protein	NA	NA	NA	NA
WP_014271374.1\|3038088_3039621_+	histidine kinase	Q9EYF3	Enterobacteria_phage	1.2e-13	28.8
WP_014271375.1\|3039598_3040369_+	response regulator	Q6XM27	Feldmannia_irregularis_virus	8.4e-05	23.1
WP_014271376.1\|3040365_3041355_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_014271377.1\|3041477_3042497_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_014271378.1\|3042566_3043106_+	TRAP transporter small permease	NA	NA	NA	NA
WP_014271379.1\|3043105_3044422_+	TRAP transporter large permease	NA	NA	NA	NA
WP_041384704.1\|3044657_3045161_+\|transposase	transposase	NA	NA	NA	NA
WP_014271381.1\|3045604_3046594_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_172635117.1\|3046735_3048220_+	sugar ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.5e-14	26.2
WP_014271383.1\|3048216_3049308_+	ABC transporter permease	NA	NA	NA	NA
WP_014271384.1\|3049309_3050395_+	ABC transporter permease	NA	NA	NA	NA
WP_014271385.1\|3050429_3052019_-	response regulator	NA	NA	NA	NA
WP_014271386.1\|3052011_3053484_-	sensor histidine kinase	NA	NA	NA	NA
WP_014271387.1\|3053485_3054490_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_081468836.1\|3055312_3055609_+	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA
WP_014271389.1\|3055684_3057709_-	recombinase family protein	Q6DMS5	Streptococcus_phage	1.8e-123	44.6
WP_014271390.1\|3057696_3059001_-	recombinase family protein	M1NSJ1	Streptococcus_phage	4.0e-76	43.3
WP_014271391.1\|3059054_3059216_-	hypothetical protein	NA	NA	NA	NA
WP_014271392.1\|3059212_3059632_-	hypothetical protein	A0A1B0RXC6	Streptococcus_phage	1.9e-19	37.6
WP_014271394.1\|3060875_3061271_+	hypothetical protein	NA	NA	NA	NA
WP_014271395.1\|3061303_3061774_+	hypothetical protein	NA	NA	NA	NA
WP_014271396.1\|3061798_3063175_-	DUF4105 domain-containing protein	NA	NA	NA	NA
WP_014271397.1\|3063477_3063849_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_155816859.1\|3063870_3066024_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	7.1e-102	33.6
WP_155816765.1\|3066567_3066711_-	hypothetical protein	NA	NA	NA	NA
WP_014271400.1\|3066964_3068479_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_014271401.1\|3068597_3069494_+\|protease	protease modulator HflC	NA	NA	NA	NA
WP_014271402.1\|3069517_3070687_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_014271403.1\|3070702_3072829_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_050805780.1\|3073209_3073917_+	response regulator transcription factor	W8CYM9	Bacillus_phage	9.0e-30	33.5
WP_014271405.1\|3073913_3075293_+	HAMP domain-containing histidine kinase	Q8QNA2	Ectocarpus_siliculosus_virus	9.7e-12	33.0
WP_041384707.1\|3075639_3076122_-	hypothetical protein	NA	NA	NA	NA
WP_155816767.1\|3076221_3077058_-	hypothetical protein	NA	NA	NA	NA
WP_155816768.1\|3077022_3077859_+	hypothetical protein	NA	NA	NA	NA
WP_155816769.1\|3078150_3078468_+	hypothetical protein	NA	NA	NA	NA
WP_014271409.1\|3078464_3081782_-	hypothetical protein	NA	NA	NA	NA
WP_014271410.1\|3081797_3082844_-	hypothetical protein	O34074	Streptococcus_phage	7.1e-31	32.4
WP_155816770.1\|3082856_3084593_-	hypothetical protein	A0A076G705	Bacillus_phage	2.1e-11	46.5
WP_014271412.1\|3084662_3086987_-	hypothetical protein	NA	NA	NA	NA
WP_014271413.1\|3087211_3087661_-	hypothetical protein	NA	NA	NA	NA
WP_014271414.1\|3087666_3088626_-	hypothetical protein	NA	NA	NA	NA
WP_014271415.1\|3088649_3089108_-	hypothetical protein	NA	NA	NA	NA
WP_014271416.1\|3089104_3089623_-	hypothetical protein	NA	NA	NA	NA
WP_014271417.1\|3089624_3090170_-	hypothetical protein	NA	NA	NA	NA
WP_014271418.1\|3090250_3090499_-	Head fiber protein	A0A2K5B289	Erysipelothrix_phage	6.6e-12	53.8
WP_014271419.1\|3090511_3091714_-\|capsid	phage major capsid protein	A0A2I4R671	Erysipelothrix_phage	7.6e-154	67.7
WP_014271420.1\|3091725_3092454_-\|protease	Clp protease ClpP	Q6DMU1	Streptococcus_phage	1.1e-65	56.7
WP_014271421.1\|3092386_3093715_-\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	5.8e-171	70.3
WP_014271422.1\|3093733_3095335_-\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	9.5e-253	78.8
WP_014271423.1\|3095406_3095631_-	hypothetical protein	A0A2K5B284	Erysipelothrix_phage	1.9e-18	55.4
WP_014271424.1\|3095767_3095947_-	DUF5049 domain-containing protein	NA	NA	NA	NA
WP_014271425.1\|3095939_3096386_-	gamma-glutamylcyclotransferase	G3MAQ5	Bacillus_virus	2.9e-18	36.2
WP_014271426.1\|3096466_3097372_-	amidoligase family protein	A0A2K9V489	Faecalibacterium_phage	3.5e-50	40.5
WP_014271427.1\|3097579_3098329_+	hypothetical protein	NA	NA	NA	NA
WP_014271428.1\|3098285_3098534_-	DUF4314 domain-containing protein	A0A2K5B281	Erysipelothrix_phage	3.0e-12	52.2
WP_014271429.1\|3098598_3098835_-	hypothetical protein	NA	NA	NA	NA
WP_014271430.1\|3098821_3099112_-	hypothetical protein	NA	NA	NA	NA
WP_014271431.1\|3099104_3099416_-	hypothetical protein	NA	NA	NA	NA
WP_014271432.1\|3099412_3099718_-	hypothetical protein	NA	NA	NA	NA
WP_014271433.1\|3099710_3100955_-	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	1.1e-176	72.8
WP_014271434.1\|3100944_3102108_-	methionine adenosyltransferase	A0A2K5B278	Erysipelothrix_phage	1.6e-132	65.4
WP_014271435.1\|3102142_3102676_-\|terminase	terminase	A0A2K5B277	Erysipelothrix_phage	3.0e-54	58.6
WP_014271436.1\|3102811_3103174_-	HNH endonuclease	A0A2K5B276	Erysipelothrix_phage	1.1e-28	47.9
WP_014271437.1\|3103463_3104057_+	hypothetical protein	NA	NA	NA	NA
WP_014271438.1\|3104134_3104545_-	DUF1492 domain-containing protein	A0A2K5B275	Erysipelothrix_phage	4.2e-11	34.1
WP_155816771.1\|3104541_3104748_-	hypothetical protein	NA	NA	NA	NA
WP_014271440.1\|3104759_3106133_-	DEAD/DEAH box helicase	A0A1X9I6B0	Streptococcus_phage	1.8e-146	57.4
WP_014271441.1\|3106113_3106395_-	VRR-NUC domain-containing protein	A0A2K5B272	Erysipelothrix_phage	4.7e-22	60.0
WP_014271442.1\|3106569_3109008_-	putative P-loop ATPase	A0A2K5B271	Erysipelothrix_phage	2.0e-262	57.0
WP_014271443.1\|3109004_3109718_-	antA/AntB antirepressor family protein	M1Q1N1	Streptococcus_phage	2.3e-25	50.4

DBSCAN-SWA_4

3132691 : 3141912

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014271465.1\|3132691_3135289_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	8.2e-113	34.7
WP_014271466.1\|3135302_3135677_-	helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	9.6e-15	40.2
WP_041385405.1\|3136094_3137666_-	recombinase family protein	A0A2K5B2B4	Erysipelothrix_phage	4.5e-154	54.7
WP_050805784.1\|3138088_3138907_-	recombinase zinc beta ribbon domain-containing protein	A0A2K5B2B2	Erysipelothrix_phage	4.1e-50	38.2
WP_155816860.1\|3139749_3140094_+	single-stranded DNA-binding protein	H9A0R6	Staphylococcus_phage	2.9e-05	35.1
WP_014271470.1\|3140675_3141260_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_014271471.1\|3141246_3141912_+	chloramphenicol acetyltransferase CAT	A0A1X9I6V6	Streptococcus_phage	1.9e-42	38.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage