CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_016627	Hungateiclostridium clariflavum DSM 19732, complete sequence	3 crisprs	RT,csa3,WYL,DEDDh,cas4,cas2,cas1,csx1,csx19,csm3gr7,csx10gr5,cas10,cas6,cas3,cas5,cas7,cas8b1,cas8b2,DinG	0	8	15	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_016627_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_016627_1

2476251-2478645

TypeIII

I-B

Consensus_repeat	Method
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CRISPRCasFinder
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CRT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	PILER-CR

32 spacers

cas1,cas2,cas4,csx1,csx19,csm3gr7,csx10gr5,cas10,cas6,cas3,cas5

The CRISPR arrays of NC_016627_1

>merge|NC_016627|1|2476251-2478645|CRISPRCasFinder,CRT,PILER-CR
GTTTTTAACCTTATTTTTATGGAACATCTACTTCAACTGGAATTGGATTCTTGAAGAAGGTCTTGAAGATTTCGTTTCAATCCTTATTTTTATAGAACATCTACTTCAACTGGGAGTATACCCCAGAAAAAACTTATGAAATAACAGAGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACTTTGGAGGGGACAATATGACGCGATACGAGAAAAGGGGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACTAGCTGATTACAGTAGCTGGTTTGAGTCTTATTTATAGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACTAGAGAATCTAGGTGTGGAGACCGCCAATAAGCTGTGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACCCCTGTGCCTGACCACGCAACCACCTCCAAACTTTAGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACAAGGTCTTCCTTTGTCGGTAAAATTATCACTGTATGCAAGGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACCATATTAGTGGAGGCATTGAAGAGCCTTGAAATTGAGGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACCAATTTATACCGAAAGTGAACGAAAAACAGCATTGTAAGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACTAATTATATTTTCACGTATATAGGTATATCTGTTCTGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACCATGTTGATTTGAGATACACTTATGTAATCCTTTGGGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACTAGATTCTCCCCGAAAAATTAAGTGTTGGGATAATGGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACTCATCATCGAGTTGCGCAAAAATCTTGATGAGTTGTGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACTAATATTTACAGTTAATCATCTACACTCACCGCCTTGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACTATCGCCAGCCACCTCAAACCGAAAGTTGTCAACTTCCGGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACACCACATACGATCAATTTTATCTTGCCCTATAATAGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACCAATTGCGGAAGGTTTAGCGGCTTTATGGCAAGAAGGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACATTTACTATTTGCGAAAGATTTATTTCATTTTCTCGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACACTGTGAACTCCACGAAATCACTCAAGAAGAGTTTTGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACGGGGCTTTGGAACTACAGGAACAAATGTCGACGACTGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACTACCTAACGAATTCCCTAAGAATCCACGTTTGTTTAGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACCTGCAATTCTCTTAATTTATCTCGGATATCCATCAATGCGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACCTAGGATGCCCTCCTAGTTCTAGGCTCTGTCGTATAGCATGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACGAAGAAGAACAAAGAAAACTTTGGGAAGATAGCAAGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACTGATGATGGAGTCTATCTGAAAATATTTGTTCAGGAGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACACCTCTTTTGGCGGATTCTTTATGTGATGCAAGATAGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACTGAAATTGACAAAAAGCAAAAGCCAAACTGTCCAGGCGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACCTGTAACATAGCAATTGCTGACGAAATTCATGCATTGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACATATATACACCCCCTACAAGTAGCTTGGAGCAAACTGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACCTGTCTTTCCCTCCTGATACAGAAAAGTATATATTATGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACCTATATTTATCTATAGCTATATGTCCTGAAGCTATGGAGTTTCAATCCTTATTTTTATGGAACATCTACTTCAACTGCAGCAACAGGCCTCAAATACTTTCAGTTATATCTGTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC

>NC_016627|1|1|2476251-2478645|CRISPRCasFinder
GTTTTTAACCTTATTTTTATGGAACATCTACTTCAAC	TGGAATTGGATTCTTGAAGAAGGTCTTGAAGATTTC
GTTTCAATCCTTATTTTTATAGAACATCTACTTCAAC	TGGGAGTATACCCCAGAAAAAACTTATGAAATAACAGA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TTTGGAGGGGACAATATGACGCGATACGAGAAAAGGG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TAGCTGATTACAGTAGCTGGTTTGAGTCTTATTTATA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TAGAGAATCTAGGTGTGGAGACCGCCAATAAGCTGT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CCCTGTGCCTGACCACGCAACCACCTCCAAACTTTA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	AAGGTCTTCCTTTGTCGGTAAAATTATCACTGTATGCAAG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CATATTAGTGGAGGCATTGAAGAGCCTTGAAATTGAG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CAATTTATACCGAAAGTGAACGAAAAACAGCATTGTAA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TAATTATATTTTCACGTATATAGGTATATCTGTTCT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CATGTTGATTTGAGATACACTTATGTAATCCTTTGG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TAGATTCTCCCCGAAAAATTAAGTGTTGGGATAATG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TCATCATCGAGTTGCGCAAAAATCTTGATGAGTTGT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TAATATTTACAGTTAATCATCTACACTCACCGCCTT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TATCGCCAGCCACCTCAAACCGAAAGTTGTCAACTTCCG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	ACCACATACGATCAATTTTATCTTGCCCTATAATA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CAATTGCGGAAGGTTTAGCGGCTTTATGGCAAGAAG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	ATTTACTATTTGCGAAAGATTTATTTCATTTTCTC
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	ACTGTGAACTCCACGAAATCACTCAAGAAGAGTTTT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	GGGGCTTTGGAACTACAGGAACAAATGTCGACGACT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TACCTAACGAATTCCCTAAGAATCCACGTTTGTTTA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CTGCAATTCTCTTAATTTATCTCGGATATCCATCAATGC
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CTAGGATGCCCTCCTAGTTCTAGGCTCTGTCGTATAGCAT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	GAAGAAGAACAAAGAAAACTTTGGGAAGATAGCAA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TGATGATGGAGTCTATCTGAAAATATTTGTTCAGGA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	ACCTCTTTTGGCGGATTCTTTATGTGATGCAAGATA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TGAAATTGACAAAAAGCAAAAGCCAAACTGTCCAGGC
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CTGTAACATAGCAATTGCTGACGAAATTCATGCATT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	ATATATACACCCCCTACAAGTAGCTTGGAGCAAACT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CTGTCTTTCCCTCCTGATACAGAAAAGTATATATTAT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CTATATTTATCTATAGCTATATGTCCTGAAGCTATGGA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TGCAGCAACAGGCCTCAAATACTTTCAGTTATATCT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC

>NC_016627|1|1|2476251-2478645|CRT
GTTTTTAACCTTATTTTTATGGAACATCTACTTCAAC	TGGAATTGGATTCTTGAAGAAGGTCTTGAAGATTTC
GTTTCAATCCTTATTTTTATAGAACATCTACTTCAAC	TGGGAGTATACCCCAGAAAAAACTTATGAAATAACAGA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TTTGGAGGGGACAATATGACGCGATACGAGAAAAGGG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TAGCTGATTACAGTAGCTGGTTTGAGTCTTATTTATA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TAGAGAATCTAGGTGTGGAGACCGCCAATAAGCTGT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CCCTGTGCCTGACCACGCAACCACCTCCAAACTTTA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	AAGGTCTTCCTTTGTCGGTAAAATTATCACTGTATGCAAG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CATATTAGTGGAGGCATTGAAGAGCCTTGAAATTGAG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CAATTTATACCGAAAGTGAACGAAAAACAGCATTGTAA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TAATTATATTTTCACGTATATAGGTATATCTGTTCT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CATGTTGATTTGAGATACACTTATGTAATCCTTTGG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TAGATTCTCCCCGAAAAATTAAGTGTTGGGATAATG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TCATCATCGAGTTGCGCAAAAATCTTGATGAGTTGT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TAATATTTACAGTTAATCATCTACACTCACCGCCTT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TATCGCCAGCCACCTCAAACCGAAAGTTGTCAACTTCCG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	ACCACATACGATCAATTTTATCTTGCCCTATAATA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CAATTGCGGAAGGTTTAGCGGCTTTATGGCAAGAAG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	ATTTACTATTTGCGAAAGATTTATTTCATTTTCTC
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	ACTGTGAACTCCACGAAATCACTCAAGAAGAGTTTT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	GGGGCTTTGGAACTACAGGAACAAATGTCGACGACT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TACCTAACGAATTCCCTAAGAATCCACGTTTGTTTA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CTGCAATTCTCTTAATTTATCTCGGATATCCATCAATGC
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CTAGGATGCCCTCCTAGTTCTAGGCTCTGTCGTATAGCAT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	GAAGAAGAACAAAGAAAACTTTGGGAAGATAGCAA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TGATGATGGAGTCTATCTGAAAATATTTGTTCAGGA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	ACCTCTTTTGGCGGATTCTTTATGTGATGCAAGATA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TGAAATTGACAAAAAGCAAAAGCCAAACTGTCCAGGC
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CTGTAACATAGCAATTGCTGACGAAATTCATGCATT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	ATATATACACCCCCTACAAGTAGCTTGGAGCAAACT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CTGTCTTTCCCTCCTGATACAGAAAAGTATATATTAT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CTATATTTATCTATAGCTATATGTCCTGAAGCTATGGA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TGCAGCAACAGGCCTCAAATACTTTCAGTTATATCT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC

>NC_016627|1|1|2476324-2478645|PILER-CR
GTTTCAATCCTTATTTTTATAGAACATCTACTTCAAC	TGGGAGTATACCCCAGAAAAAACTTATGAAATAACAGA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TTTGGAGGGGACAATATGACGCGATACGAGAAAAGGG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TAGCTGATTACAGTAGCTGGTTTGAGTCTTATTTATA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TAGAGAATCTAGGTGTGGAGACCGCCAATAAGCTGT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CCCTGTGCCTGACCACGCAACCACCTCCAAACTTTA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	AAGGTCTTCCTTTGTCGGTAAAATTATCACTGTATGCAAG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CATATTAGTGGAGGCATTGAAGAGCCTTGAAATTGAG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CAATTTATACCGAAAGTGAACGAAAAACAGCATTGTAA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TAATTATATTTTCACGTATATAGGTATATCTGTTCT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CATGTTGATTTGAGATACACTTATGTAATCCTTTGG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TAGATTCTCCCCGAAAAATTAAGTGTTGGGATAATG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TCATCATCGAGTTGCGCAAAAATCTTGATGAGTTGT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TAATATTTACAGTTAATCATCTACACTCACCGCCTT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TATCGCCAGCCACCTCAAACCGAAAGTTGTCAACTTCCG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	ACCACATACGATCAATTTTATCTTGCCCTATAATA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CAATTGCGGAAGGTTTAGCGGCTTTATGGCAAGAAG
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	ATTTACTATTTGCGAAAGATTTATTTCATTTTCTC
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	ACTGTGAACTCCACGAAATCACTCAAGAAGAGTTTT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	GGGGCTTTGGAACTACAGGAACAAATGTCGACGACT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TACCTAACGAATTCCCTAAGAATCCACGTTTGTTTA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CTGCAATTCTCTTAATTTATCTCGGATATCCATCAATGC
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CTAGGATGCCCTCCTAGTTCTAGGCTCTGTCGTATAGCAT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	GAAGAAGAACAAAGAAAACTTTGGGAAGATAGCAA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TGATGATGGAGTCTATCTGAAAATATTTGTTCAGGA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	ACCTCTTTTGGCGGATTCTTTATGTGATGCAAGATA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TGAAATTGACAAAAAGCAAAAGCCAAACTGTCCAGGC
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CTGTAACATAGCAATTGCTGACGAAATTCATGCATT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	ATATATACACCCCCTACAAGTAGCTTGGAGCAAACT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CTGTCTTTCCCTCCTGATACAGAAAAGTATATATTAT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	CTATATTTATCTATAGCTATATGTCCTGAAGCTATGGA
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC	TGCAGCAACAGGCCTCAAATACTTTCAGTTATATCT
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_016627.1\|WP_014255329.1\|2466936_2468433_-\|IMP-dehydrogenase	unknown	unknown	gnl\|CDD\|180842
NC_016627.1\|WP_014255332.1\|2470682_2472248_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NC_016627.1\|WP_014255343.1\|2484211_2485543_-\|hypothetical-protein	csm3gr7	cd09726_csm3gr7_CAS-III-D	gnl\|CDD\|187857
NC_016627.1\|WP_014255339.1\|2478925_2480401_-\|TIGR02710-family-CRISPR-associated-protein	csx1	cd09747_csx1_CAS-III	gnl\|CDD\|378236
NC_016627.1\|WP_014255330.1\|2468619_2469375_-\|(S)-benzoin-forming-benzil-reductase	unknown	unknown	gnl\|CDD\|180753
NC_016627.1\|WP_014255337.1\|2474887_2475178_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_016627.1\|WP_014255347.1\|2489320_2489980_-\|CRISPR-associated-endonuclease-Cas6	cas6	cls000004_cas6_CAS-I:CAS-III	gnl\|CDD\|379957
NC_016627.1\|WP_014255349.1\|2492417_2493131_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
NC_016627.1\|WP_014255345.1\|2487133_2487808_-\|hypothetical-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|377130
NC_016627.1\|WP_014255342.1\|2483839_2484205_-\|hypothetical-protein	csx19	mkCas0124_csx19_CAS-III-D	unknown
NC_016627.1\|WP_014255346.1\|2487810_2489274_-\|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl\|CDD\|187810
NC_016627.1\|WP_014255336.1\|2474298_2474913_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NC_016627.1\|WP_014255340.1\|2480452_2481700_-\|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|187863
NC_016627.1\|WP_014255331.1\|2469888_2470497_-\|HAD-family-phosphatase	unknown	unknown	gnl\|CDD\|319790
NC_016627.1\|WP_014255333.1\|2472322_2472937_-\|HDIG-domain-containing-protein	unknown	unknown	gnl\|CDD\|131739
NC_016627.1\|WP_014255348.1\|2490007_2492404_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NC_016627.1\|WP_014255334.1\|2472911_2473073_-\|hypothetical-protein	unknown	unknown	unknown
NC_016627.1\|WP_014255338.1\|2475171_2476167_-\|CRISPR-associated-endonuclease-Cas1	cas1	pfam01867_cas1_CAS-I:CAS-II:CAS-III	gnl\|CDD\|376633
NC_016627.1\|WP_014255335.1\|2473254_2473719_-\|chemotaxis-protein-CheX	unknown	unknown	gnl\|CDD\|381734
NC_016627.1\|WP_014255344.1\|2485539_2487141_-\|CRISPR-associated-protein	csx10gr5	cls000715_csx10gr5_CAS-III-D	gnl\|CDD\|131722

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_016627.1\|WP_014255343.1\|2484211_2485543_-\|hypothetical-protein	csm3gr7	cd09726_csm3gr7_CAS-III-D	3.1e-43	143.0	6.1
NC_016627.1\|WP_014255339.1\|2478925_2480401_-\|TIGR02710-family-CRISPR-associated-protein	csx1	cd09747_csx1_CAS-III	1.7e-133	439.9	0.2
NC_016627.1\|WP_014255337.1\|2474887_2475178_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	1.9e-23	77.2	0.1
NC_016627.1\|WP_014255347.1\|2489320_2489980_-\|CRISPR-associated-endonuclease-Cas6	cas6	cls000004_cas6_CAS-I:CAS-III	4.1e-85	279.5	0.1
NC_016627.1\|WP_014255349.1\|2492417_2493131_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	5e-50	165.0	2.6
NC_016627.1\|WP_014255342.1\|2483839_2484205_-\|hypothetical-protein	csx19	mkCas0124_csx19_CAS-III-D	5.8e-81	263.3	7.0
NC_016627.1\|WP_014255346.1\|2487810_2489274_-\|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	1.6e-89	295.5	1.7
NC_016627.1\|WP_014255336.1\|2474298_2474913_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	5.8e-40	132.1	10.3
NC_016627.1\|WP_014255345.1\|2487133_2487808_-\|hypothetical-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	1.2e-49	163.4	0.0
NC_016627.1\|WP_014255344.1\|2485539_2487141_-\|CRISPR-associated-protein	csx10gr5	cls000715_csx10gr5_CAS-III-D	1.9e-19	64.8	0.0
NC_016627.1\|WP_014255338.1\|2475171_2476167_-\|CRISPR-associated-endonuclease-Cas1	cas1	pfam01867_cas1_CAS-I:CAS-II:CAS-III	3.8e-89	293.4	0.5
NC_016627.1\|WP_014255348.1\|2490007_2492404_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	1.9e-48	160.0	19.8
NC_016627.1\|WP_014255340.1\|2480452_2481700_-\|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	3e-86	284.4	4.2

Protein	Function_ID	Function_description	E-value
NC_016627.1\|WP_014255329.1\|2466936_2468433_-\|IMP-dehydrogenase	gnl\|CDD\|180842	PRK07107, PRK07107, IMP dehydrogenase.	0
NC_016627.1\|WP_014255332.1\|2470682_2472248_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	3.67057e-50
NC_016627.1\|WP_014255343.1\|2484211_2485543_-\|hypothetical-protein	gnl\|CDD\|187857	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily proteins.	4.29639e-15
NC_016627.1\|WP_014255339.1\|2478925_2480401_-\|TIGR02710-family-CRISPR-associated-protein	gnl\|CDD\|378236	pfam09670, Cas_Cas02710, CRISPR-associated protein (Cas_Cas02710). Members of this family are found, exclusively in the vicinity of CRISPR repeats and other CRISPR-associated (cas) genes, in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum), Thermus thermophilus (Deinococcus-Thermus), Chloroflexus aurantiacus (Chloroflexi), and Thermomicrobium roseum (Thermomicrobia).	5.95241e-151
NC_016627.1\|WP_014255330.1\|2468619_2469375_-\|(S)-benzoin-forming-benzil-reductase	gnl\|CDD\|180753	PRK06924, PRK06924, (S)-benzoin forming benzil reductase.	4.09565e-107
NC_016627.1\|WP_014255337.1\|2474887_2475178_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.03059e-20
NC_016627.1\|WP_014255347.1\|2489320_2489980_-\|CRISPR-associated-endonuclease-Cas6	gnl\|CDD\|379957	pfam17262, DUF5328, Family of unknown function (DUF5328). This family of unknown function can be found in Bacteria and Archaea. Some of the proteins in this family are annotated in UniProt as putative DNA repair proteins.	4.75067e-55
NC_016627.1\|WP_014255349.1\|2492417_2493131_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	1.91078e-44
NC_016627.1\|WP_014255346.1\|2487810_2489274_-\|hypothetical-protein	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	8.09419e-09
NC_016627.1\|WP_014255336.1\|2474298_2474913_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	3.51864e-35
NC_016627.1\|WP_014255340.1\|2480452_2481700_-\|TIGR02221-family-CRISPR-associated-protein	gnl\|CDD\|187863	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TM1812 family.	8.50725e-63
NC_016627.1\|WP_014255331.1\|2469888_2470497_-\|HAD-family-phosphatase	gnl\|CDD\|319790	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive. This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	8.02881e-32
NC_016627.1\|WP_014255333.1\|2472322_2472937_-\|HDIG-domain-containing-protein	gnl\|CDD\|131739	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase. The enzyme tRNA adenylyltransferase, also called tRNA-nucleotidyltransferase and CCA-adding enzyme, can add or repair the required CCA triplet at the 3'-end of tRNA molecules. Genes encoding tRNA include the CCA tail in some but not all bacteria, and this enzyme may be required for viability. Members of this family represent a distinct clade within the larger family pfam01743 (tRNA nucleotidyltransferase/poly(A) polymerase family protein). The example from Streptomyces coelicolor was shown to act as a CCA-adding enzyme and not as a poly(A) polymerase. [Protein synthesis, tRNA and rRNA base modification].	3.44082e-15
NC_016627.1\|WP_014255348.1\|2490007_2492404_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.91906e-47
NC_016627.1\|WP_014255345.1\|2487133_2487808_-\|hypothetical-protein	gnl\|CDD\|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	1.80988e-11
NC_016627.1\|WP_014255338.1\|2475171_2476167_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	7.37741e-94
NC_016627.1\|WP_014255335.1\|2473254_2473719_-\|chemotaxis-protein-CheX	gnl\|CDD\|381734	cd17906, CheX, chemotaxis phosphatase CheX. This family contains CheX CheY-P phosphatase which is very closely related to CheC chemotaxis phosphatase; both dephosphorylate CheY, although CheC requires binding of CheD to achieve the level of activity of CheX. CheX has been shown to be the most powerful CheY-P phosphatase of the CheC-FliY-CheX (CXY) family. Structural and functional data of CheX and its CheY3 substrate in Borrelia burgdorferi (the causative agent of Lyme disease) bound to the phosphoryl analog BeF3(-) and Mg2+ reveal a unique mode of binding, but a catalytic mechanism which is virtually identical to that used by the structurally unrelated CheZ, providing a striking example of convergent evolution. Thus, CheX is quite divergent from the rest of the CXY family; it forms a dimer and some may function outside chemotaxis. The data also suggest a possible CheX regulatory mechanism through dissociation of the CheX homodimer.	2.45265e-42
NC_016627.1\|WP_014255344.1\|2485539_2487141_-\|CRISPR-associated-protein	gnl\|CDD\|131722	TIGR02674, cas_cyan_RAMP_2, CRISPR-associated RAMP protein, Csx10 family. CRISPR is a widespread repeat family in prokaryotes. At least 45 different protein families occur in prokaryotes only when these repeats are present. This family, a minor CRISPR-associated protein family, seems largely restricted to the Cyanobacteria. It belongs to the RAMP superfamily (pfam03787).	9.10681e-07

>NC_016627.1|WP_014255338.1|2475171_2476167_-|CRISPR-associated-endonuclease-Cas1
MKLVLNTPGLYLCRRGECFQIQDNNEKKEIAAAKVDQIMITTHAAMTTDAIELALENNIDIIFLKSTGQPMGRVWHSKLGSISTIRRKQLFLQDSPFGLLLIKEWLVEKMDNQIKLLNKLAANRRDEERRKIIKDALEKIQKQKENIQAIPSNETVENVRGLILGYEGTAGRVYFETLGKLIPEKYYFEKRSRNPALDPFNCMLNYSYGILYSSVEKACIIAGLDPYIGIMHTDNYNKKALVFDLVEMYRGYMDEIVFRLFSTKKVEDEFFDRVEEGYYLNKEGKKLLIGEYNKELEVKMNYRGRCIEFANIIQYDCHQIANRILKEEIKC
>NC_016627.1|WP_014255337.1|2474887_2475178_-|CRISPR-associated-endonuclease-Cas2
MLTWVIYDIASTKTRNSIIRKCKNVGLYRVQKSVFLGDLEDNKFDELKLELDSIIDKDKDSVYVFPMSKAELNKAGLLGQAFDKELVTDEIISKFF
>NC_016627.1|WP_014255336.1|2474298_2474913_-|CRISPR-associated-protein-Cas4
MKLSQNFFNENQYYITPSDIIEFLYCKRFAYYMKCLGISQNEEKRFKVMMGRQLHEKRESENRDYLRKKIGSCGKRIGVNLVSEKYGIKGNADEIHELEDGTMAPLDYKYAKYEERLFKTYKNQMVLYALMIEEVYGKPVNKGYLVYCREGNRLVEIEITKEDKDRVLEYLDEYRRVLEGYYPQAAKEKSKCTDCCYRNICTKC
>NC_016627.1|WP_014255335.1|2473254_2473719_-|chemotaxis-protein-CheX
MKAEYVNSFYAATKNVFQLLVDIEPKRGDLKVVDSLSNDKDANVELGVKGDIKGKVLFSFPKNMTLEMVKIMSGMEMDKIDNFASSALGEIANIIGGNAMTLLSENNYTCDIEPPQIYIGDYKAVSENDEKALMMSLMTPIGEFDITISLKEKK
>NC_016627.1|WP_014255334.1|2472911_2473073_-|hypothetical-protein
MGAENKRKSTKNRKKEDGSFRSKNIKHDKGESARAVFGINPENTDHDLKNRSV
>NC_016627.1|WP_014255333.1|2472322_2472937_-|HDIG-domain-containing-protein
MISKTEVFKDIENHLLYDDKPSSYLNDISNSELFKEYPLNWLRDMKYTMQSPKHHPEGSVWNHTMLVVDEAAKEKHKSKNKRVFMWAALLHDIGKPGTTKVRNGRITSYDHDKLGAKMTEKFLEEFSQDREFIEAVSNLVRWHMHILFVLKGLPFGDIEGMKKHTDLEELALLGLCDRMGRTGADRDEEMKNIDLFLDKVISKV
>NC_016627.1|WP_014255332.1|2470682_2472248_+|FAD-dependent-oxidoreductase
MNSNLDKNFNNPPQSYWMASVQQPEYPVLNDDIKADIAIVGGGFAGIATAYFLKKQGINAVILEADRILQGTTGHTTAKITSQHELIYSKLKKQMGEELTKQYADANETAIKIIEKIICENNIECDYTPQSAYVFTQDESYLEQIKDEVETASSLGIKAAYVEEIPFSIPIKGAVRFDDQAQFHPLKFLHPLAQKLYNDGVRIFEQSRVVDMEEHGNYILITNRGKKVTAEKVIIASHYPFYNKHGLYFGRLYTDRSYALAIKAKEKYPGGMYINIEEPARSLRIVKTDQGELIIVGGDHHKTGQGIDTTMHYEALKAFANRIFTVEDYPYRWSTQDCMTMDGVPYVGNYTSKTPNLYIATGFGKWGMTNSIAAAAILSDLIVKGDSPWKDVYNPSRQTIIASAKNFVVENLNVAKELIGGKISPAPASEDIKPGEGKIIEINGQKAGAYRDEQGTLHIVDTTCTHMGCELSWNSAEKTWDCPCHGSRFTYEGDIVEGPTVTPLKVHKDVNTIEKLLKDDF
>NC_016627.1|WP_014255331.1|2469888_2470497_-|HAD-family-phosphatase
MDKKFEYIVFDLGGVMVELAAYEKMMEWMEHKITLEEFNKKWLLSNAVRSFESGKITPSEFANAIIEEFNLPVSEEEFIKGFMNFIKGFYDGMEDLLKKLSQNYTLACLSNTSELHWSKLCSEYDIESMIKHNFLSYKTGLNKPDKEAFLNVIRALGTEPDKILYFDDNQINVDAARQVGMEAYRVCGCEEVCRVLEELKII
>NC_016627.1|WP_014255330.1|2468619_2469375_-|(S)-benzoin-forming-benzil-reductase
MNYYIITGASRGLGRAIAENLLSKDNHLFCISRRMNDDVITEAGLKDCKIDYFEYDFNFIEEIDMLISTIFERINFSKAQTVCMINNAATLNPIKPVGKYPSFEIISSMNVNLIAPMLLISEFIRRTEEVSCNKMIVNISSGAGKHPYYGWGCYCSAKAALDMFTGCVGLEQSNSPNPVKIISFNPGIMDTDMQSEIRQSREEDFEQVERFIKLKEQGKLKSPDFVAKKLLELIHNNETKSGMLYDINELQ
>NC_016627.1|WP_014255329.1|2466936_2468433_-|IMP-dehydrogenase
MAYIYNEVSRTFSEYLLIPNLTTERCAPDRVDLSTPLVKYRRGEEEPELKLNIPIASAIMQSVSNDTLAIALARCGGISFIYGSQPVESQAEMVRKVKKYKSGFVVSDSNLRVDNTLKDVLELKKRMGHSTIAVTDDGTSNGKLLGIVTSRDYRISRDPLDKKVGDFMTPFSKLIVGRLGITLSEANDIIWENKLNCLPIVDENQKLHYFVFRKDYDAHKENPYELLDKNKRLMVGAGINTRDYEERVPALVDAGVDILCIDSSDGFSVWQKRTLEYVKSNFKDMKIGGGNVVDREGFLYLAEAGADFVKVGIGGGSICITREQKGIGRGQATAVIEVAKARDEYFEKTGIYIPICSDGGTVHDYHIVLALAMGADFVMMGRYFARFDESPSKKVKRGNSYVKEYWGEGSNRARNWQRYDLGESTNLKFEEGVDSYVPYAGKLKDNLEVTLSKIKSTMSSCGAASIPELQQNARLTLVSSVSIVEGGAHDVILKENEY
>NC_016627.1|WP_014255339.1|2478925_2480401_-|TIGR02710-family-CRISPR-associated-protein
MNDIYIKMKEKRDMWYAMDRSNNERRILAEQYYKKELMPLIIEYFIQENAKKVTGNCDAMVLTLGTSYEPLVLSIAVLKPEKVLILYTDKSHHLLDEVIEFTKLKPSQYIATDVDAENPLQLYQKIKDIYEKWGRPKNIYVDFTGGTKSMAAGCAMAGSAIGAKLIYVGGNFLPDLRKPEPGSEKLCYIDDPYSVFGDLEGEQAISLFNNMDYVSAYRIFKELEQRVPGTKAKEYSALKYISKAYNAWDSLDISKASENLSRCCEIIETEGKLEKGFTLSSHIEKLKKQLEVIKVLEKIHCSEEATKDKSIIFNNIGYLIANLYQNAMRREKQEKYEMASLLLYRILEIVEQKRLWNYGIDTSNADFTKLCEDESILLENANKIIRKIKGLNEWKQLDRKISLLAGYIILAAVGDEIMKTKKPGKETDSINRLRSKVDVRNNSIFAHGYEFISKEKYMEFKKVVEDYIDLLCSIDCINKEEIFSICKFINL
>NC_016627.1|WP_014255340.1|2480452_2481700_-|TIGR02221-family-CRISPR-associated-protein
MAKKLFAFLGIGDYKSVEYYFQNKNEGYKTEYIQEAITKLLDEQDLNVTVFVTEEARKKHWEPESNIGLKSKLEKLNINCKAVDIPDGKANNDVWKIFLNVYNEIDINDEIYVDVTHSLRNIPIIFMSVLNYAKVAKNCIIKGIFYGAYEAKENDRAHIYDLTLFDQIGEWSSGVEQLLMTGECEMFCSTVEKTLGPLLREAKGTDELIKLVKKCSKLIKEFYTDLKLVRGKSVLEDGRKLYQVLCEIKALNTEKHITIQPFFHILEQVENQVAFFQNENLIENILECVKLCKKFGQYQQAYTFLRENIINYVCINTGLDWEKEDPDRLIAEELIGKLYAKNIKKLQIEIVGDIKTILENRGNFISDDTIELFGELIEFRNDLDHAQFRMVNPSKDKFACKLDSFIERFEKYYIS
>NC_016627.1|WP_014255342.1|2483839_2484205_-|hypothetical-protein
MKIEKIQSGDIASLIKDFNNYIIYYFDNLKFGKGQIELDTDNVNEAFFFGEGKCLHIYREDGVKGMLYIEEPEDKEFILEEQILEDRILKEPLKVLAVKKYIEYDEDGQAYISRTLPVKFI
>NC_016627.1|WP_014255343.1|2484211_2485543_-|hypothetical-protein
MIYKNRLFKTIRYNVKATTISPLAIRDDEDNLKIDQLTGKVYIPGSSVAGAFRNYYENYIDKNSNENFNELFGGQKTGMSQIVFYDGYLVNDYVKAMISSRPGIKMDPKRMTVEVSDDVKKSGKKFKRRFLNEGLTFEFVFELNNYEDDAGKFEEKQRKFEDLLKAFSIGDISLGSNKMIGYGRFKVDSISKSVFDFTNINDLFKYMLRKNNSTEITQDILGRERETSKVRFKIKGKTVTPLLVKDETVRLSNQPDGINIKDSRGNYIIPGSSIKGVIRSRAERLHKTFPCIGEEILTNIFGIESKKDDDGHISRLSCFDAVVKNPNKGIYNKIKIDYFTGGVMQRALMNDEVVMGDVEIECTFNTSGLNDYKKEIGLLLLVLRDLCKEDLSIGSGYAVGRGYIKADALELYDGEKLVFDFKSPDGEILKIFDSYISSLMNVG
>NC_016627.1|WP_014255344.1|2485539_2487141_-|CRISPR-associated-protein
MHKSIQFDIQALEPLKLGKFERDSNNEYSYSYIPGSVVKGAVAWGLVEEKCFIPKEILNGISIFYNAYPLLDGNPAIPMMQGYMGDKQEIRSNKDNVHVVHSFNRKIENSIPLNNYEFVVKDAKNEKLLLGYNPGKIENLHINKKDTLNDNSKLKMFRYEAIRKGECFRAYIRVPEKYYDDIVKILSKDYIYFGGSRGSGYGKCRVISIKEVSTVCLYESDLDIKEDLYIYFLSDAILYYNGKVNTYIPENELKEMLGIEGKCEYIESYSSLGVAASYNTLYRTNTVCYTAVLKGSVIKYKVEGKINPDRIKKLASEGVGLRREDGYGQIAVLGKIQDDMVVSRYREKDIVEKSDIELTDEDKHVANMILCNIFKSRSRLQIEKMVIGLLKDVKRPQESLQSQIGKLLNIFQNGFYQTEHDFRKYLNEYLEHIRKKKGKDVWHKLYDFTVANTLDKSSSERLSIQKMLEDFVQNKSNSVFREIENIVSKGITLGRCQYPVESQKAQVLYNLKMGFFISFFEYCLRLKEKEVIS
>NC_016627.1|WP_014255345.1|2487133_2487808_-|hypothetical-protein
MEEYTLKIELLTDAVFGSGNSVPGFVDADVLHDEYGFLYINGKTLKGKLGEMASVFVNILMEIDECREIAEILQKKKEELFGVAEKYSHSKLKFSDCEFSKNIKDYFKCYMKDSDIKPEEILEALTHIETQTSINYVSGVAKKNSLRNYRVINRGIVLYSTVYSPKKLDNEDKILLASACSMLRHLGSNETKGKGEVRVSLWLEEKEVTHEYIRFLEKKVKLNA
>NC_016627.1|WP_014255346.1|2487810_2489274_-|hypothetical-protein
MGFLTILEVSKKQSYIFKSNRLRENIGASEIIEFVTKELPQELCDDYNGNHISSGGGSSIYYFENNDDCINFSKAYSRRIIKEYPSLEFFIASLEYDPEKDIIIDKTRELFERLERKKAKRDTYSCIIDFGVSKKCSSTRLPAIYKEELSGNYYSSEAKSKIDMFNQRGKSNSQFALDIKDLGVSKNEKSYIAITHIDGNRMGKRISNLRESFRSKYNSENIKEINEQYINALNQFSTDIDKAFKTAFNKMVETVEKNRKNLEKERMELKSSVIPIRKVVLAGDDVCYITDARIALECAYIFLQELEKYKVMGEKITACAGIAIVKEKYPFFKTYELSEELCKNAKSSIEEGKIESRIDWHIVQGEYNNNLGEIRNTVYKTLDGKDLSMRPLVVSKESDSPNHYSLFRKDIEVIRTRKLPGGKIKGMLKEMKKGEAYLDTYIEINQIYNVLGAHRLNAKSGFLNGKCVLFDAIEALDYFIPFCDEEV
>NC_016627.1|WP_014255347.1|2489320_2489980_-|CRISPR-associated-endonuclease-Cas6
MLTVKLEGNKVASRDVPKIRGYLAGRFPEYVELHNHLGDGKFKYGYPVIQYKSISGVPNIIAINDASKILIDIFYDVKEIDMKDKIMSILEKGYILKTMKFGPSEGLIEYEFLTPWMALNQDNFEEYVKASLEERVGILKKVLVGNILSMAKGLNCWVDKPIEAMIKLRPVEVNFKNKKMVGFKGRFLTNFVIPDYLGLGKSVARGFGTVVKVKDGGFV
>NC_016627.1|WP_014255348.1|2490007_2492404_-|CRISPR-associated-helicase/endonuclease-Cas3
MLLSHPDKLLKEHLKNVSLIGDSILLQKRINFKSFSNDKIRQLNRINLLTHDLGKATSYFQDYIKNVNGKQNNDEKKSHGLLSGVLSFKIASTVLKDEALAFFSYMVVSKHHGELEDFSNFISVLHGDENNRNLLKLQFESIDKTELQNVIAELGIDFSISEYTTDEFLADIDYLTSRKVRNKVKELLGIETFLLINLLFSLLIFSDKLEAIYNSEKMSIEDFIEKSTHRPNLLSSCVDNFKKGLEIKNIQMAKRRDEIYEDVVESVRNINLEEKILSINLPTGSGKTLIALKTALMLKERIIKEEGYNPGIIYVLPFTSIIEQNFDVFKDVLGSDDSKVMLKHHYLSERSYKWEKDGKKEEYSDAISEHLVESWDSEIVVSTFVQLLHSIFTNRNRKLKKFHSMVNSIIILDEVQSIPHKYWKLVNETFKAMALFLNCRFILMTATMPLIFSESDGEIYELATCKKRYFSEFNRINIDASRLENGMTLEEFKAFIYDEINRYEEDDFLIVLNTIMTSIDVFSYIKDEFEDIAEVYYLSTNIIPKERLGRIEKIKDSKNRKIIVSTQMIEAGVDIDIDRVYRDFGPMDSINQTAGRCNREWCGKKGIVTLVNLVNENHHDKAYSSYIYDTILMEETKSALKDKDMIEEKDIFQLAERYYNGLKSHGNDESDWLLNCIGELRYREAFEHREDKNSKAFELIKQEFKTVDVFIEADDEASEVWEKYQSIKLIADRFERKRQFNKLKKDFYQFVLSLPEQAVKKHVEIDEKEITFISREMLCSTYDKDTGFIRKIDRDYFI
>NC_016627.1|WP_014255349.1|2492417_2493131_-|type-I-B-CRISPR-associated-protein-Cas5
MAQKFLVFDVSAPYGHFKKPYTTTSPLTYSIPTRTAVAGMIAAILGFGKEDYQKLFTKDLAQIGIGIRKPIKKVRISENLINTKKSMNRIHERTQIKIEYLKDVCYRIYFTHKDEKIYGKLKEFLTRHCSVYTISMGLSENLANYTFVGEFEGQEISGSKEFVEFSSVLPVDRIAKGDVEYEDDREYFTENIPVEMDEERNVKEYREILFERNSRKIKAKLENFTKIMEIDENIMIL

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Crispr_ID: NC_016627_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_016627_2

2496169-2502078

TypeIII

I-B

Consensus_repeat	Method
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CRISPRCasFinder
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CRT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	PILER-CR

79 spacers

cas8b1,cas7,cas5,cas3,cas6,cas10,csm3gr7,csx10gr5,csx19

The CRISPR arrays of NC_016627_2

>merge|NC_016627|2|2496169-2502078|CRISPRCasFinder,CRT,PILER-CR
ATTAAGTCCCTGTTTTTACTGGATATACTACTTCAACGATGTGTACTACGACCTAAGCGCCGCGTGTGTCAGGTGTGTTTCAATCCTTATTTTGCTGGAAGTTCTACTTCAACTGCTGACCTTGAGTTTACAGCATTGGCAACTGTTATGTTTCAATCCTTATTTTATTGGAAGTTCTACTTCAACACGCTCATCACGTACACACGATTTCCAGTCGCACTTATGTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAACGTATCTTGAAGGGCAAAGCTTTGTAGGTAATTATGAGTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAACTACAGCAGTTACTTATGCATTATATCAACAAATAAAGTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAACCAGCCAATCCCAATATAACCGCCGTGGCTATTTTGAGTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAACGTTCGCCTGCAAAGTTATTTCCTATTCTAGCAATTGGTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAACATTAATAGAAAAATGGAATAATACAGACCCATATATTTAGTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAACATTGACGGTCTGCTGTTATACCGTCTATAAAAAAAAGTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAACTATTAATATAACATATAAAACATTGAGATATTACAAGAAAAGTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAACTTTCCCACCATGAGAACCAAAATCATCAACTTCTTCTAGTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAACCAAGACAGCGACACCTATAGGCAATGGACTATTTTAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACAATAGATGCCAAAGAAATGGGAGACATTGCAAGAAAGAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTTAACTTGTTGCCTGCCATTATGGCACCCTCCTTTCTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACCAAAACAATACGCTGTATAAGGGTCAGTTATATCTAAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACAAGTATGCAGACCGAATCAAGGAAGAACTTAAGGTTATGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTCGGCGAAGAATGGTTTAACAGATTGTCCGAACTCGGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACCAGAACCTCCAAACCAAGTGATGTTTAATTTGCGAAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTACGGTATACGCAGGAAAAAAAGACATCGAAGGCATGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTATATTATGGAAGTTTGTGAGACTCACACTCACTAGGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACCTGTTTTAATAATTGATATAATATCTGGATCATAATGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACCAGGTATGATGGTGCAAATATTTTCTACGGCTATGTTTTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACATTTGTAGACGGATTAGGAGCATTAAAGCAAGCCATATAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTTAACACCCTTGTGCTGATTGAGGAGCTGACCGTAACGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACAGGCTTTTTTAAGGAGAATATATGAAGTAATATGTTTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACCAGCATTAATAAGCTGATTTACCTTTACAATAACTTTATGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTTAAAAGTCCCATCTCTAATTTGCATATCCTCACTCTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTTTAGGATATTTTGCCTGTAAATCTAATAGATATTTAGTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACACGAACTTGAGGAAATAATGGCGGAATTACCGCTGCGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTTTAGGATATTTTGCCTGTAAATCTAATAGATATTTAGTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACACGAACTTGAGGAAATAATGGCGGAATTACCGCTGCGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACGAATATAAGTGATAAGTTAGGAAGCTTAACTGATGCAGGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACGGAGTTATATTATCTGTTGAATACGGTGTATATGCTTTAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACATATACTGAGATTAGACATACAATCACCTCTTTTAAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACCGTGTTAATCCGATTGTTAACCTATTTGTCAATTTAGATGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACGATACTATCTCAAAACCCTCGTCGAGAGATCCATCTTCTTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTTAATTTTTTATCATTGCAAAACTGTTTAAGCCAAAAAGGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTTAATTTGCACAAGGAGGTGCTGGCAGGGTTTATCCCGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACAATATACCAAGATATTCAATGCTAACAGGGATAAAATGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACCTGTTTTTTCAATTTCAAATATTCTTTTTGACATTTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACAACATTTGGAAAATCTTTGGCGTACCATCCATAGACCCGAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACCAAGAGAGATTTAAACAAGAAAAATACAGGTTATTGAAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACAAACACAAAGCGGCGGGGTTGCTTGCAAAAAGCACAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTAGATAATTCACAAGAAAAAGCAAAGGTTGAAAAATATTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTGATTACAGAAATGGGATACAATGCAATAGCAGAAGATAGGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACGGGTTGCCATTAAGTGTAAAGATGTCCGTTTATGCAGGGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTGAGCATTCTGCAACCAAATGAATGGAAGATACTCAAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTATAGATTGGTTTGAGTTATATTTAGATGATATTTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACAAAAATTACGGAAAAAAAGAGGTTACAATATCTGGGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTAATATAACAGGCATATTTACAGTGAGTACGGGCAGCTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACCGGGGGCGTGAATCTATGTAAAGCCATCATGGCATGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACACCTCTCCATATTTTTGTAATATTCCTTGACCATATTGGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTAAATTCGACCATGCGATTTGTTACTGGATCTCCAGCGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACACGATAAATTTGCTCCTGCTCTTTCAACAAGCAGAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACCTTAACCTGCTCGACTGAGAACATCTCGGCTGGAAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACGTTTTTTTAGTTTCGTCATAATTGCCATATTTAATAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACGCCAACAACGTAAGCAAAGGAAATTATTTCTTTGTACCGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTTGAAGAAACTGCTAAAAATTTGATTTCTACATTGTTAAAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTACTAACAGAAAAACACCTGATTTTACAAAAATTTTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACAATGCTTCGTGAAACCTCACAATTTCGGTACCTTTATGAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACGCTGACATTTACAATTTTATACAGTTGGCAAATTGGAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACAAGGAGTGAGTATAGCAATAAATACAGCACTAGCAATTGTTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTGCACAAGAGATAAGAAGGTATCTTATAGACTGTGACGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACACAACTGCGCGCATCATTATCTCAATCAAACACCTCAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTTGGTATACAAAGGAAGTGGAAGATGACGGAGAAGTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACAACATGCAACATATAACAAGGTTTTAGCAGAACAATTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACCCCCTCAATAATCTGGGTAATCTTTTCGTTTCCTTAGTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACAAATAGATGTACTTTATATTGATTTAGAAGCTCAATAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACACAACCTATTATATATAATAGGTTACGCGTCCATAAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACACCCACAACAAAGAAAAGATTTTTTCGCAAAATCACGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTCTATGTTGCCACTCTCATCAGGATCGGCCTCGCAAAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTGGATATAGGGCTGTATTAAAAGATGTTGTTAACGGAAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACGCTCATTGCTTTCGCTTCCCTACATGAACTCAAAAAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTTGACCTGATGATTGTACAGTTTTATTCCAATGTAGAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACAGCAGCTCGTCAAAAAGAGCTCGAAGAGCTCCGCCAGTGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTGTATGTAGAACTTGATGCGAAAGCACGTCAATTGTAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACCCTTCGATATTTCCCTGCACTTCCATATTTTCTCAAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACATTAATATGAAAATTCCATCATAATTATTGTAACATAGCAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAACTTTTCTCAGGCTTATAATATCTACGAACATTATCACGAGTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC

>NC_016627|2|2|2496169-2502078|CRISPRCasFinder
ATTAAGTCCCTGTTTTTACTGGATATACTACTTCAAC	GATGTGTACTACGACCTAAGCGCCGCGTGTGTCAGGTGT
GTTTCAATCCTTATTTTGCTGGAAGTTCTACTTCAAC	TGCTGACCTTGAGTTTACAGCATTGGCAACTGTTAT
GTTTCAATCCTTATTTTATTGGAAGTTCTACTTCAAC	ACGCTCATCACGTACACACGATTTCCAGTCGCACTTAT
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	GTATCTTGAAGGGCAAAGCTTTGTAGGTAATTATGA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	TACAGCAGTTACTTATGCATTATATCAACAAATAAA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	CAGCCAATCCCAATATAACCGCCGTGGCTATTTTGA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	GTTCGCCTGCAAAGTTATTTCCTATTCTAGCAATTG
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	ATTAATAGAAAAATGGAATAATACAGACCCATATATTTA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	ATTGACGGTCTGCTGTTATACCGTCTATAAAAAAAA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	TATTAATATAACATATAAAACATTGAGATATTACAAGAAAA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	TTTCCCACCATGAGAACCAAAATCATCAACTTCTTCTA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	CAAGACAGCGACACCTATAGGCAATGGACTATTTTA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AATAGATGCCAAAGAAATGGGAGACATTGCAAGAAAGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTAACTTGTTGCCTGCCATTATGGCACCCTCCTTTCT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CAAAACAATACGCTGTATAAGGGTCAGTTATATCTAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AAGTATGCAGACCGAATCAAGGAAGAACTTAAGGTTAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TCGGCGAAGAATGGTTTAACAGATTGTCCGAACTCG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CAGAACCTCCAAACCAAGTGATGTTTAATTTGCGAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TACGGTATACGCAGGAAAAAAAGACATCGAAGGCAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TATATTATGGAAGTTTGTGAGACTCACACTCACTAG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CTGTTTTAATAATTGATATAATATCTGGATCATAAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CAGGTATGATGGTGCAAATATTTTCTACGGCTATGTTTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ATTTGTAGACGGATTAGGAGCATTAAAGCAAGCCATATA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTAACACCCTTGTGCTGATTGAGGAGCTGACCGTAAC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AGGCTTTTTTAAGGAGAATATATGAAGTAATATGTTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CAGCATTAATAAGCTGATTTACCTTTACAATAACTTTAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTAAAAGTCCCATCTCTAATTTGCATATCCTCACTCT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTTAGGATATTTTGCCTGTAAATCTAATAGATATTTAGT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACGAACTTGAGGAAATAATGGCGGAATTACCGCTGC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTTAGGATATTTTGCCTGTAAATCTAATAGATATTTAGT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACGAACTTGAGGAAATAATGGCGGAATTACCGCTGC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GAATATAAGTGATAAGTTAGGAAGCTTAACTGATGCAG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GGAGTTATATTATCTGTTGAATACGGTGTATATGCTTTA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ATATACTGAGATTAGACATACAATCACCTCTTTTAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CGTGTTAATCCGATTGTTAACCTATTTGTCAATTTAGAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GATACTATCTCAAAACCCTCGTCGAGAGATCCATCTTCTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTAATTTTTTATCATTGCAAAACTGTTTAAGCCAAAAAG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTAATTTGCACAAGGAGGTGCTGGCAGGGTTTATCCC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AATATACCAAGATATTCAATGCTAACAGGGATAAAAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CTGTTTTTTCAATTTCAAATATTCTTTTTGACATTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AACATTTGGAAAATCTTTGGCGTACCATCCATAGACCCGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CAAGAGAGATTTAAACAAGAAAAATACAGGTTATTGAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AAACACAAAGCGGCGGGGTTGCTTGCAAAAAGCACA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TAGATAATTCACAAGAAAAAGCAAAGGTTGAAAAATATT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TGATTACAGAAATGGGATACAATGCAATAGCAGAAGATAG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GGGTTGCCATTAAGTGTAAAGATGTCCGTTTATGCAGG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TGAGCATTCTGCAACCAAATGAATGGAAGATACTCAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TATAGATTGGTTTGAGTTATATTTAGATGATATTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AAAAATTACGGAAAAAAAGAGGTTACAATATCTGG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TAATATAACAGGCATATTTACAGTGAGTACGGGCAGCT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CGGGGGCGTGAATCTATGTAAAGCCATCATGGCAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACCTCTCCATATTTTTGTAATATTCCTTGACCATATTG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TAAATTCGACCATGCGATTTGTTACTGGATCTCCAGC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACGATAAATTTGCTCCTGCTCTTTCAACAAGCAGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CTTAACCTGCTCGACTGAGAACATCTCGGCTGGAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GTTTTTTTAGTTTCGTCATAATTGCCATATTTAATA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GCCAACAACGTAAGCAAAGGAAATTATTTCTTTGTACC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTGAAGAAACTGCTAAAAATTTGATTTCTACATTGTTAAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TACTAACAGAAAAACACCTGATTTTACAAAAATTTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AATGCTTCGTGAAACCTCACAATTTCGGTACCTTTATGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GCTGACATTTACAATTTTATACAGTTGGCAAATTGGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AAGGAGTGAGTATAGCAATAAATACAGCACTAGCAATTGTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TGCACAAGAGATAAGAAGGTATCTTATAGACTGTGAC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACAACTGCGCGCATCATTATCTCAATCAAACACCTCA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTGGTATACAAAGGAAGTGGAAGATGACGGAGAAGT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AACATGCAACATATAACAAGGTTTTAGCAGAACAATT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CCCCTCAATAATCTGGGTAATCTTTTCGTTTCCTTAGT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AAATAGATGTACTTTATATTGATTTAGAAGCTCAATA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACAACCTATTATATATAATAGGTTACGCGTCCATAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACCCACAACAAAGAAAAGATTTTTTCGCAAAATCAC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TCTATGTTGCCACTCTCATCAGGATCGGCCTCGCAAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TGGATATAGGGCTGTATTAAAAGATGTTGTTAACGGAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GCTCATTGCTTTCGCTTCCCTACATGAACTCAAAAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTGACCTGATGATTGTACAGTTTTATTCCAATGTAGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AGCAGCTCGTCAAAAAGAGCTCGAAGAGCTCCGCCAGT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TGTATGTAGAACTTGATGCGAAAGCACGTCAATTGTA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CCTTCGATATTTCCCTGCACTTCCATATTTTCTCAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ATTAATATGAAAATTCCATCATAATTATTGTAACATAGCA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTTTCTCAGGCTTATAATATCTACGAACATTATCACGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC

>NC_016627|2|2|2496169-2502078|CRT
ATTAAGTCCCTGTTTTTACTGGATATACTACTTCAAC	GATGTGTACTACGACCTAAGCGCCGCGTGTGTCAGGTGT
GTTTCAATCCTTATTTTGCTGGAAGTTCTACTTCAAC	TGCTGACCTTGAGTTTACAGCATTGGCAACTGTTAT
GTTTCAATCCTTATTTTATTGGAAGTTCTACTTCAAC	ACGCTCATCACGTACACACGATTTCCAGTCGCACTTAT
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	GTATCTTGAAGGGCAAAGCTTTGTAGGTAATTATGA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	TACAGCAGTTACTTATGCATTATATCAACAAATAAA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	CAGCCAATCCCAATATAACCGCCGTGGCTATTTTGA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	GTTCGCCTGCAAAGTTATTTCCTATTCTAGCAATTG
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	ATTAATAGAAAAATGGAATAATACAGACCCATATATTTA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	ATTGACGGTCTGCTGTTATACCGTCTATAAAAAAAA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	TATTAATATAACATATAAAACATTGAGATATTACAAGAAAA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	TTTCCCACCATGAGAACCAAAATCATCAACTTCTTCTA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	CAAGACAGCGACACCTATAGGCAATGGACTATTTTA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AATAGATGCCAAAGAAATGGGAGACATTGCAAGAAAGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTAACTTGTTGCCTGCCATTATGGCACCCTCCTTTCT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CAAAACAATACGCTGTATAAGGGTCAGTTATATCTAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AAGTATGCAGACCGAATCAAGGAAGAACTTAAGGTTAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TCGGCGAAGAATGGTTTAACAGATTGTCCGAACTCG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CAGAACCTCCAAACCAAGTGATGTTTAATTTGCGAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TACGGTATACGCAGGAAAAAAAGACATCGAAGGCAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TATATTATGGAAGTTTGTGAGACTCACACTCACTAG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CTGTTTTAATAATTGATATAATATCTGGATCATAAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CAGGTATGATGGTGCAAATATTTTCTACGGCTATGTTTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ATTTGTAGACGGATTAGGAGCATTAAAGCAAGCCATATA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTAACACCCTTGTGCTGATTGAGGAGCTGACCGTAAC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AGGCTTTTTTAAGGAGAATATATGAAGTAATATGTTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CAGCATTAATAAGCTGATTTACCTTTACAATAACTTTAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTAAAAGTCCCATCTCTAATTTGCATATCCTCACTCT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTTAGGATATTTTGCCTGTAAATCTAATAGATATTTAGT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACGAACTTGAGGAAATAATGGCGGAATTACCGCTGC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTTAGGATATTTTGCCTGTAAATCTAATAGATATTTAGT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACGAACTTGAGGAAATAATGGCGGAATTACCGCTGC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GAATATAAGTGATAAGTTAGGAAGCTTAACTGATGCAG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GGAGTTATATTATCTGTTGAATACGGTGTATATGCTTTA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ATATACTGAGATTAGACATACAATCACCTCTTTTAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CGTGTTAATCCGATTGTTAACCTATTTGTCAATTTAGAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GATACTATCTCAAAACCCTCGTCGAGAGATCCATCTTCTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTAATTTTTTATCATTGCAAAACTGTTTAAGCCAAAAAG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTAATTTGCACAAGGAGGTGCTGGCAGGGTTTATCCC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AATATACCAAGATATTCAATGCTAACAGGGATAAAAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CTGTTTTTTCAATTTCAAATATTCTTTTTGACATTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AACATTTGGAAAATCTTTGGCGTACCATCCATAGACCCGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CAAGAGAGATTTAAACAAGAAAAATACAGGTTATTGAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AAACACAAAGCGGCGGGGTTGCTTGCAAAAAGCACA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TAGATAATTCACAAGAAAAAGCAAAGGTTGAAAAATATT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TGATTACAGAAATGGGATACAATGCAATAGCAGAAGATAG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GGGTTGCCATTAAGTGTAAAGATGTCCGTTTATGCAGG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TGAGCATTCTGCAACCAAATGAATGGAAGATACTCAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TATAGATTGGTTTGAGTTATATTTAGATGATATTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AAAAATTACGGAAAAAAAGAGGTTACAATATCTGG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TAATATAACAGGCATATTTACAGTGAGTACGGGCAGCT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CGGGGGCGTGAATCTATGTAAAGCCATCATGGCAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACCTCTCCATATTTTTGTAATATTCCTTGACCATATTG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TAAATTCGACCATGCGATTTGTTACTGGATCTCCAGC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACGATAAATTTGCTCCTGCTCTTTCAACAAGCAGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CTTAACCTGCTCGACTGAGAACATCTCGGCTGGAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GTTTTTTTAGTTTCGTCATAATTGCCATATTTAATA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GCCAACAACGTAAGCAAAGGAAATTATTTCTTTGTACC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTGAAGAAACTGCTAAAAATTTGATTTCTACATTGTTAAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TACTAACAGAAAAACACCTGATTTTACAAAAATTTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AATGCTTCGTGAAACCTCACAATTTCGGTACCTTTATGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GCTGACATTTACAATTTTATACAGTTGGCAAATTGGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AAGGAGTGAGTATAGCAATAAATACAGCACTAGCAATTGTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TGCACAAGAGATAAGAAGGTATCTTATAGACTGTGAC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACAACTGCGCGCATCATTATCTCAATCAAACACCTCA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTGGTATACAAAGGAAGTGGAAGATGACGGAGAAGT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AACATGCAACATATAACAAGGTTTTAGCAGAACAATT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CCCCTCAATAATCTGGGTAATCTTTTCGTTTCCTTAGT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AAATAGATGTACTTTATATTGATTTAGAAGCTCAATA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACAACCTATTATATATAATAGGTTACGCGTCCATAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACCCACAACAAAGAAAAGATTTTTTCGCAAAATCAC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TCTATGTTGCCACTCTCATCAGGATCGGCCTCGCAAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TGGATATAGGGCTGTATTAAAAGATGTTGTTAACGGAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GCTCATTGCTTTCGCTTCCCTACATGAACTCAAAAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTGACCTGATGATTGTACAGTTTTATTCCAATGTAGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AGCAGCTCGTCAAAAAGAGCTCGAAGAGCTCCGCCAGT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TGTATGTAGAACTTGATGCGAAAGCACGTCAATTGTA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CCTTCGATATTTCCCTGCACTTCCATATTTTCTCAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ATTAATATGAAAATTCCATCATAATTATTGTAACATAGCA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTTTCTCAGGCTTATAATATCTACGAACATTATCACGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC

>NC_016627|2|2|2496245-2502078|PILER-CR
GTTTCAATCCTTATTTTGCTGGAAGTTCTACTTCAAC	TGCTGACCTTGAGTTTACAGCATTGGCAACTGTTAT
GTTTCAATCCTTATTTTATTGGAAGTTCTACTTCAAC	ACGCTCATCACGTACACACGATTTCCAGTCGCACTTAT
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	GTATCTTGAAGGGCAAAGCTTTGTAGGTAATTATGA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	TACAGCAGTTACTTATGCATTATATCAACAAATAAA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	CAGCCAATCCCAATATAACCGCCGTGGCTATTTTGA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	GTTCGCCTGCAAAGTTATTTCCTATTCTAGCAATTG
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	ATTAATAGAAAAATGGAATAATACAGACCCATATATTTA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	ATTGACGGTCTGCTGTTATACCGTCTATAAAAAAAA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	TATTAATATAACATATAAAACATTGAGATATTACAAGAAAA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	TTTCCCACCATGAGAACCAAAATCATCAACTTCTTCTA
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC	CAAGACAGCGACACCTATAGGCAATGGACTATTTTA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AATAGATGCCAAAGAAATGGGAGACATTGCAAGAAAGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTAACTTGTTGCCTGCCATTATGGCACCCTCCTTTCT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CAAAACAATACGCTGTATAAGGGTCAGTTATATCTAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AAGTATGCAGACCGAATCAAGGAAGAACTTAAGGTTAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TCGGCGAAGAATGGTTTAACAGATTGTCCGAACTCG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CAGAACCTCCAAACCAAGTGATGTTTAATTTGCGAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TACGGTATACGCAGGAAAAAAAGACATCGAAGGCAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TATATTATGGAAGTTTGTGAGACTCACACTCACTAG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CTGTTTTAATAATTGATATAATATCTGGATCATAAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CAGGTATGATGGTGCAAATATTTTCTACGGCTATGTTTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ATTTGTAGACGGATTAGGAGCATTAAAGCAAGCCATATA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTAACACCCTTGTGCTGATTGAGGAGCTGACCGTAAC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AGGCTTTTTTAAGGAGAATATATGAAGTAATATGTTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CAGCATTAATAAGCTGATTTACCTTTACAATAACTTTAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTAAAAGTCCCATCTCTAATTTGCATATCCTCACTCT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTTAGGATATTTTGCCTGTAAATCTAATAGATATTTAGT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACGAACTTGAGGAAATAATGGCGGAATTACCGCTGC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTTAGGATATTTTGCCTGTAAATCTAATAGATATTTAGT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACGAACTTGAGGAAATAATGGCGGAATTACCGCTGC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GAATATAAGTGATAAGTTAGGAAGCTTAACTGATGCAG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GGAGTTATATTATCTGTTGAATACGGTGTATATGCTTTA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ATATACTGAGATTAGACATACAATCACCTCTTTTAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CGTGTTAATCCGATTGTTAACCTATTTGTCAATTTAGAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GATACTATCTCAAAACCCTCGTCGAGAGATCCATCTTCTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTAATTTTTTATCATTGCAAAACTGTTTAAGCCAAAAAG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTAATTTGCACAAGGAGGTGCTGGCAGGGTTTATCCC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AATATACCAAGATATTCAATGCTAACAGGGATAAAAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CTGTTTTTTCAATTTCAAATATTCTTTTTGACATTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AACATTTGGAAAATCTTTGGCGTACCATCCATAGACCCGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CAAGAGAGATTTAAACAAGAAAAATACAGGTTATTGAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AAACACAAAGCGGCGGGGTTGCTTGCAAAAAGCACA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TAGATAATTCACAAGAAAAAGCAAAGGTTGAAAAATATT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TGATTACAGAAATGGGATACAATGCAATAGCAGAAGATAG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GGGTTGCCATTAAGTGTAAAGATGTCCGTTTATGCAGG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TGAGCATTCTGCAACCAAATGAATGGAAGATACTCAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TATAGATTGGTTTGAGTTATATTTAGATGATATTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AAAAATTACGGAAAAAAAGAGGTTACAATATCTGG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TAATATAACAGGCATATTTACAGTGAGTACGGGCAGCT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CGGGGGCGTGAATCTATGTAAAGCCATCATGGCAT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACCTCTCCATATTTTTGTAATATTCCTTGACCATATTG
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TAAATTCGACCATGCGATTTGTTACTGGATCTCCAGC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACGATAAATTTGCTCCTGCTCTTTCAACAAGCAGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CTTAACCTGCTCGACTGAGAACATCTCGGCTGGAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GTTTTTTTAGTTTCGTCATAATTGCCATATTTAATA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GCCAACAACGTAAGCAAAGGAAATTATTTCTTTGTACC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTGAAGAAACTGCTAAAAATTTGATTTCTACATTGTTAAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TACTAACAGAAAAACACCTGATTTTACAAAAATTTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AATGCTTCGTGAAACCTCACAATTTCGGTACCTTTATGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GCTGACATTTACAATTTTATACAGTTGGCAAATTGGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AAGGAGTGAGTATAGCAATAAATACAGCACTAGCAATTGTT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TGCACAAGAGATAAGAAGGTATCTTATAGACTGTGAC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACAACTGCGCGCATCATTATCTCAATCAAACACCTCA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTGGTATACAAAGGAAGTGGAAGATGACGGAGAAGT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AACATGCAACATATAACAAGGTTTTAGCAGAACAATT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CCCCTCAATAATCTGGGTAATCTTTTCGTTTCCTTAGT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AAATAGATGTACTTTATATTGATTTAGAAGCTCAATA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACAACCTATTATATATAATAGGTTACGCGTCCATAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ACCCACAACAAAGAAAAGATTTTTTCGCAAAATCAC
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TCTATGTTGCCACTCTCATCAGGATCGGCCTCGCAAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TGGATATAGGGCTGTATTAAAAGATGTTGTTAACGGAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	GCTCATTGCTTTCGCTTCCCTACATGAACTCAAAAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTGACCTGATGATTGTACAGTTTTATTCCAATGTAGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	AGCAGCTCGTCAAAAAGAGCTCGAAGAGCTCCGCCAGT
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TGTATGTAGAACTTGATGCGAAAGCACGTCAATTGTA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	CCTTCGATATTTCCCTGCACTTCCATATTTTCTCAA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	ATTAATATGAAAATTCCATCATAATTATTGTAACATAGCA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC	TTTTCTCAGGCTTATAATATCTACGAACATTATCACGA
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_016627.1\|WP_014255353.1\|2504270_2504726_-\|transcriptional-regulator-NrdR	unknown	unknown	gnl\|CDD\|234774
NC_016627.1\|WP_014255361.1\|2511530_2511896_-\|small-basic-family-protein	unknown	unknown	gnl\|CDD\|377739
NC_016627.1\|WP_014255358.1\|2508352_2508667_+\|hypothetical-protein	unknown	unknown	unknown
NC_016627.1\|WP_014255344.1\|2485539_2487141_-\|CRISPR-associated-protein	csx10gr5	cls000715_csx10gr5_CAS-III-D	gnl\|CDD\|131722
NC_016627.1\|WP_014255343.1\|2484211_2485543_-\|hypothetical-protein	csm3gr7	cd09726_csm3gr7_CAS-III-D	gnl\|CDD\|187857
NC_016627.1\|WP_041715085.1\|2494059_2495904_-\|TIGR02556-family-CRISPR-associated-protein	cas8b1	cd09730_cas8b1_CAS-I-B	gnl\|CDD\|378190
NC_016627.1\|WP_014255357.1\|2507107_2508004_-\|sigma-E-processing-peptidase-SpoIIGA	unknown	unknown	gnl\|CDD\|377033
NC_016627.1\|WP_014255360.1\|2510088_2511324_-\|cell-division-protein-FtsA	unknown	unknown	gnl\|CDD\|223918
NC_016627.1\|WP_014255359.1\|2508783_2509878_-\|cell-division-protein-FtsZ	unknown	unknown	gnl\|CDD\|236468
NC_016627.1\|WP_014255347.1\|2489320_2489980_-\|CRISPR-associated-endonuclease-Cas6	cas6	cls000004_cas6_CAS-I:CAS-III	gnl\|CDD\|379957
NC_016627.1\|WP_014255350.1\|2493145_2494063_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	gnl\|CDD\|274217
NC_016627.1\|WP_014255342.1\|2483839_2484205_-\|hypothetical-protein	csx19	mkCas0124_csx19_CAS-III-D	unknown
NC_016627.1\|WP_014255346.1\|2487810_2489274_-\|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl\|CDD\|187810
NC_016627.1\|WP_014255352.1\|2502348_2504202_-\|motility-associated-factor-glycosyltransferase-family-protein	unknown	unknown	gnl\|CDD\|376693
NC_016627.1\|WP_014255345.1\|2487133_2487808_-\|hypothetical-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|377130
NC_016627.1\|WP_014255354.1\|2504952_2505222_-\|YlmC/YmxH-family-sporulation-protein	unknown	unknown	gnl\|CDD\|274339
NC_016627.1\|WP_014255356.1\|2506333_2507068_-\|RNA-polymerase-sporulation-sigma-factor-SigE	unknown	unknown	gnl\|CDD\|236228
NC_016627.1\|WP_014255355.1\|2505391_2506165_-\|RNA-polymerase-sporulation-sigma-factor-SigG	unknown	unknown	gnl\|CDD\|181296
NC_016627.1\|WP_014255349.1\|2492417_2493131_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
NC_016627.1\|WP_014255348.1\|2490007_2492404_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688

Protein	Function_ID	Function_description	E-value
NC_016627.1\|WP_014255361.1\|2511530_2511896_-\|small-basic-family-protein	gnl\|CDD\|377739	pfam06947, DUF1290, Protein of unknown function (DUF1290). This family consists of several bacterial small basic proteins of around 100 residues in length. The function of this family is unknown.	3.42164e-38
NC_016627.1\|WP_014255344.1\|2485539_2487141_-\|CRISPR-associated-protein	gnl\|CDD\|131722	TIGR02674, cas_cyan_RAMP_2, CRISPR-associated RAMP protein, Csx10 family. CRISPR is a widespread repeat family in prokaryotes. At least 45 different protein families occur in prokaryotes only when these repeats are present. This family, a minor CRISPR-associated protein family, seems largely restricted to the Cyanobacteria. It belongs to the RAMP superfamily (pfam03787).	9.10681e-07
NC_016627.1\|WP_014255343.1\|2484211_2485543_-\|hypothetical-protein	gnl\|CDD\|187857	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily proteins.	4.29639e-15
NC_016627.1\|WP_014255353.1\|2504270_2504726_-\|transcriptional-regulator-NrdR	gnl\|CDD\|234774	PRK00464, nrdR, transcriptional repressor NrdR.	9.43993e-92
NC_016627.1\|WP_014255357.1\|2507107_2508004_-\|sigma-E-processing-peptidase-SpoIIGA	gnl\|CDD\|377033	pfam03419, Peptidase_U4, Sporulation factor SpoIIGA.	4.88795e-94
NC_016627.1\|WP_014255360.1\|2510088_2511324_-\|cell-division-protein-FtsA	gnl\|CDD\|223918	COG0849, ftsA, Cell division ATPase FtsA [Cell division and chromosome partitioning].	5.95306e-109
NC_016627.1\|WP_014255359.1\|2508783_2509878_-\|cell-division-protein-FtsZ	gnl\|CDD\|236468	PRK09330, PRK09330, cell division protein FtsZ; Validated.	0
NC_016627.1\|WP_014255347.1\|2489320_2489980_-\|CRISPR-associated-endonuclease-Cas6	gnl\|CDD\|379957	pfam17262, DUF5328, Family of unknown function (DUF5328). This family of unknown function can be found in Bacteria and Archaea. Some of the proteins in this family are annotated in UniProt as putative DNA repair proteins.	4.75067e-55
NC_016627.1\|WP_014255350.1\|2493145_2494063_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl\|CDD\|274217	TIGR02590, hypothetical_protein_MM_0563, CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csh2 protein of the Hmari subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02589, the Csd3 protein of the Dvulg CRISPR subtype.	6.21273e-93
NC_016627.1\|WP_041715085.1\|2494059_2495904_-\|TIGR02556-family-CRISPR-associated-protein	gnl\|CDD\|378190	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This minor cas protein is found in at least five prokaryotic genomes: Methanosarcina mazei, Sulfurihydrogenibium azorense, Thermotoga maritima, Carboxydothermus hydrogenoformans, and Dictyoglomus thermophilum, the first of which is archaeal while the rest are bacterial.	2.91816e-157
NC_016627.1\|WP_014255346.1\|2487810_2489274_-\|hypothetical-protein	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	8.09419e-09
NC_016627.1\|WP_014255352.1\|2502348_2504202_-\|motility-associated-factor-glycosyltransferase-family-protein	gnl\|CDD\|376693	pfam01973, MAF_flag10, Protein of unknown function DUF115. This family of archaebacterial proteins has no known function.	1.61998e-48
NC_016627.1\|WP_014255345.1\|2487133_2487808_-\|hypothetical-protein	gnl\|CDD\|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	1.80988e-11
NC_016627.1\|WP_014255354.1\|2504952_2505222_-\|YlmC/YmxH-family-sporulation-protein	gnl\|CDD\|274339	TIGR02888, conserved_hypothetical_protein, sporulation protein, YlmC/YmxH family. Members of this family belong to the broader family of PRC-barrel domain proteins (see pfam05239), but are found only in endospore-forming bacteria of the Firmicutes lineage. Most such species have exactly two members of this family and all have at least one; the function is unknown. One of two members from Bacillus subtilis, YmxH, is strongly induced by the mother cell-specific sigma-E factor. [Cellular processes, Sporulation and germination].	4.77889e-26
NC_016627.1\|WP_014255356.1\|2506333_2507068_-\|RNA-polymerase-sporulation-sigma-factor-SigE	gnl\|CDD\|236228	PRK08301, PRK08301, RNA polymerase sporulation sigma factor SigE.	9.90351e-159
NC_016627.1\|WP_014255355.1\|2505391_2506165_-\|RNA-polymerase-sporulation-sigma-factor-SigG	gnl\|CDD\|181296	PRK08215, PRK08215, RNA polymerase sporulation sigma factor SigG.	0
NC_016627.1\|WP_014255349.1\|2492417_2493131_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	1.91078e-44
NC_016627.1\|WP_014255348.1\|2490007_2492404_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.91906e-47

>NC_016627.1|WP_041715085.1|2494059_2495904_-|TIGR02556-family-CRISPR-associated-protein
MLTGILQIGEYVLNSKSVEADDYIQVIENPNEKGNYRHVLKIGFNLNERNVGYRGIEYEEFSDKKIVKYAYKKGSARGGDITPTSKYTDPSKTLNKIMISLNDILKNSNPSYEEFTIFKNIYEYISSNQEKIENEISEKIKSITLEKGESFIITLSLFENENERYMGDFNIIKDRLGKISNEQYFNKYGTTSKGIGICYYCKQKTEVFGFVNTYNSYTVDKIGFVSGGFKQENAWKNYPVCGSCAQKLEQGKKYLRENLSSRFSGFNYFVIPKAVIRDKEDEKEFIKTLEEFEKNKNFSTEKDTRQNLLASERDFLDIMKDSKNFLNYNMLIYKEEQSGSVFRILLYIEDIVPSKVKNILKIKDKIDDIDLFRNLPGKDNSTYDLKFGFDKIRTFFPNNKTEGNFDKSFLEILNNVFTYKKISYKFLLNRMISKIRSAFVNEEYIDALVLQALMSILFIEKLNLFSDKEKGVQKIMIEKTEKNKKYLDFFENESYKDAFDSDYKKAVFLTGVLTEKLLNIQYDERKSKPFYSRLNGLKLDRKLVKRIFSEAVNKLNEYNKNYYKELEYLIGMYMLGEEADKNISNDDISFYFVLGMTLAKHFKEEKKDGEDVEP
>NC_016627.1|WP_014255350.1|2493145_2494063_-|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MIKNRQEILFLYDVTDANPNGDPLDENKPRIDEETGVNIVTDVRLKRTIRDYLFSYKGYDGSNGKDIFVRELESEKGGIKDGKARAKDFNEDLNEIIEKAIDIRLFGGVIPLDKASITFTGPVQFGMGRSLNKVSLKHIKGTGAFASGEGKAQKTFREEYILPYSLIGFHGIVNENAAKETRLSDEDVELLDEAMWNGTKNLITRSKMGHMPRLMLRVVYKAGQNFFIGDLQNKIELVSDLPDEKIRSVKDFAIKIDELVNELVLYKDRVEKVVYIADKNLKLVLNGQGINLKDIKEIKFEEKSY
>NC_016627.1|WP_014255349.1|2492417_2493131_-|type-I-B-CRISPR-associated-protein-Cas5
MAQKFLVFDVSAPYGHFKKPYTTTSPLTYSIPTRTAVAGMIAAILGFGKEDYQKLFTKDLAQIGIGIRKPIKKVRISENLINTKKSMNRIHERTQIKIEYLKDVCYRIYFTHKDEKIYGKLKEFLTRHCSVYTISMGLSENLANYTFVGEFEGQEISGSKEFVEFSSVLPVDRIAKGDVEYEDDREYFTENIPVEMDEERNVKEYREILFERNSRKIKAKLENFTKIMEIDENIMIL
>NC_016627.1|WP_014255348.1|2490007_2492404_-|CRISPR-associated-helicase/endonuclease-Cas3
MLLSHPDKLLKEHLKNVSLIGDSILLQKRINFKSFSNDKIRQLNRINLLTHDLGKATSYFQDYIKNVNGKQNNDEKKSHGLLSGVLSFKIASTVLKDEALAFFSYMVVSKHHGELEDFSNFISVLHGDENNRNLLKLQFESIDKTELQNVIAELGIDFSISEYTTDEFLADIDYLTSRKVRNKVKELLGIETFLLINLLFSLLIFSDKLEAIYNSEKMSIEDFIEKSTHRPNLLSSCVDNFKKGLEIKNIQMAKRRDEIYEDVVESVRNINLEEKILSINLPTGSGKTLIALKTALMLKERIIKEEGYNPGIIYVLPFTSIIEQNFDVFKDVLGSDDSKVMLKHHYLSERSYKWEKDGKKEEYSDAISEHLVESWDSEIVVSTFVQLLHSIFTNRNRKLKKFHSMVNSIIILDEVQSIPHKYWKLVNETFKAMALFLNCRFILMTATMPLIFSESDGEIYELATCKKRYFSEFNRINIDASRLENGMTLEEFKAFIYDEINRYEEDDFLIVLNTIMTSIDVFSYIKDEFEDIAEVYYLSTNIIPKERLGRIEKIKDSKNRKIIVSTQMIEAGVDIDIDRVYRDFGPMDSINQTAGRCNREWCGKKGIVTLVNLVNENHHDKAYSSYIYDTILMEETKSALKDKDMIEEKDIFQLAERYYNGLKSHGNDESDWLLNCIGELRYREAFEHREDKNSKAFELIKQEFKTVDVFIEADDEASEVWEKYQSIKLIADRFERKRQFNKLKKDFYQFVLSLPEQAVKKHVEIDEKEITFISREMLCSTYDKDTGFIRKIDRDYFI
>NC_016627.1|WP_014255347.1|2489320_2489980_-|CRISPR-associated-endonuclease-Cas6
MLTVKLEGNKVASRDVPKIRGYLAGRFPEYVELHNHLGDGKFKYGYPVIQYKSISGVPNIIAINDASKILIDIFYDVKEIDMKDKIMSILEKGYILKTMKFGPSEGLIEYEFLTPWMALNQDNFEEYVKASLEERVGILKKVLVGNILSMAKGLNCWVDKPIEAMIKLRPVEVNFKNKKMVGFKGRFLTNFVIPDYLGLGKSVARGFGTVVKVKDGGFV
>NC_016627.1|WP_014255346.1|2487810_2489274_-|hypothetical-protein
MGFLTILEVSKKQSYIFKSNRLRENIGASEIIEFVTKELPQELCDDYNGNHISSGGGSSIYYFENNDDCINFSKAYSRRIIKEYPSLEFFIASLEYDPEKDIIIDKTRELFERLERKKAKRDTYSCIIDFGVSKKCSSTRLPAIYKEELSGNYYSSEAKSKIDMFNQRGKSNSQFALDIKDLGVSKNEKSYIAITHIDGNRMGKRISNLRESFRSKYNSENIKEINEQYINALNQFSTDIDKAFKTAFNKMVETVEKNRKNLEKERMELKSSVIPIRKVVLAGDDVCYITDARIALECAYIFLQELEKYKVMGEKITACAGIAIVKEKYPFFKTYELSEELCKNAKSSIEEGKIESRIDWHIVQGEYNNNLGEIRNTVYKTLDGKDLSMRPLVVSKESDSPNHYSLFRKDIEVIRTRKLPGGKIKGMLKEMKKGEAYLDTYIEINQIYNVLGAHRLNAKSGFLNGKCVLFDAIEALDYFIPFCDEEV
>NC_016627.1|WP_014255345.1|2487133_2487808_-|hypothetical-protein
MEEYTLKIELLTDAVFGSGNSVPGFVDADVLHDEYGFLYINGKTLKGKLGEMASVFVNILMEIDECREIAEILQKKKEELFGVAEKYSHSKLKFSDCEFSKNIKDYFKCYMKDSDIKPEEILEALTHIETQTSINYVSGVAKKNSLRNYRVINRGIVLYSTVYSPKKLDNEDKILLASACSMLRHLGSNETKGKGEVRVSLWLEEKEVTHEYIRFLEKKVKLNA
>NC_016627.1|WP_014255344.1|2485539_2487141_-|CRISPR-associated-protein
MHKSIQFDIQALEPLKLGKFERDSNNEYSYSYIPGSVVKGAVAWGLVEEKCFIPKEILNGISIFYNAYPLLDGNPAIPMMQGYMGDKQEIRSNKDNVHVVHSFNRKIENSIPLNNYEFVVKDAKNEKLLLGYNPGKIENLHINKKDTLNDNSKLKMFRYEAIRKGECFRAYIRVPEKYYDDIVKILSKDYIYFGGSRGSGYGKCRVISIKEVSTVCLYESDLDIKEDLYIYFLSDAILYYNGKVNTYIPENELKEMLGIEGKCEYIESYSSLGVAASYNTLYRTNTVCYTAVLKGSVIKYKVEGKINPDRIKKLASEGVGLRREDGYGQIAVLGKIQDDMVVSRYREKDIVEKSDIELTDEDKHVANMILCNIFKSRSRLQIEKMVIGLLKDVKRPQESLQSQIGKLLNIFQNGFYQTEHDFRKYLNEYLEHIRKKKGKDVWHKLYDFTVANTLDKSSSERLSIQKMLEDFVQNKSNSVFREIENIVSKGITLGRCQYPVESQKAQVLYNLKMGFFISFFEYCLRLKEKEVIS
>NC_016627.1|WP_014255343.1|2484211_2485543_-|hypothetical-protein
MIYKNRLFKTIRYNVKATTISPLAIRDDEDNLKIDQLTGKVYIPGSSVAGAFRNYYENYIDKNSNENFNELFGGQKTGMSQIVFYDGYLVNDYVKAMISSRPGIKMDPKRMTVEVSDDVKKSGKKFKRRFLNEGLTFEFVFELNNYEDDAGKFEEKQRKFEDLLKAFSIGDISLGSNKMIGYGRFKVDSISKSVFDFTNINDLFKYMLRKNNSTEITQDILGRERETSKVRFKIKGKTVTPLLVKDETVRLSNQPDGINIKDSRGNYIIPGSSIKGVIRSRAERLHKTFPCIGEEILTNIFGIESKKDDDGHISRLSCFDAVVKNPNKGIYNKIKIDYFTGGVMQRALMNDEVVMGDVEIECTFNTSGLNDYKKEIGLLLLVLRDLCKEDLSIGSGYAVGRGYIKADALELYDGEKLVFDFKSPDGEILKIFDSYISSLMNVG
>NC_016627.1|WP_014255342.1|2483839_2484205_-|hypothetical-protein
MKIEKIQSGDIASLIKDFNNYIIYYFDNLKFGKGQIELDTDNVNEAFFFGEGKCLHIYREDGVKGMLYIEEPEDKEFILEEQILEDRILKEPLKVLAVKKYIEYDEDGQAYISRTLPVKFI
>NC_016627.1|WP_014255352.1|2502348_2504202_-|motility-associated-factor-glycosyltransferase-family-protein
MNNVLEKNLQIMKKYQPHLYSKMDSYIKGNYVSKNKSIERILLARQDDLVINIAVRTLGKDYVLCDHEDPINEAYAWIDRYVDPSNSVDIVFGIGMAFHLEVLITSFPNKKVLIIEPNIDLFYQIICVRNLEFLFEKAEILVDEDKDTILGKIGTFFWNTDEGGIQLEPLEVYAELFPQIWEDLRDRFVKMAQSFTVDILTRRKFGELWVHNNIKNLNLIAEASNAAELIGRFKGVPAILVSAGPSLKKNVHLLKELKDKCIIMAAGTAVTVLQDFGITPHFMMGIDAGENEGRIHERVTAKDIYFLYSNQVSPKSLRSYQGPKFLMNYPMDLYTNEFFKRQNIKSDFFLSGPSVANTCFDVLYKMGCNPIILVGQDLAFTDESNYANQQPGALSERIRENKGTYVKVKDIYGNDVYTTPAFLAMKNWFEGYFEKVAQRVEIINATEGGLNIEYAKNDTLANVMDKYQFKKQYLERDIKEIHNNSRFRDIIGNGVQEYLQFVAMEMDKLDKLSKEQLKLVNLIENDICDPRKNRREYERTVNSIKELSDKVINSPIYPSLLKNLIEIEFFLIKAEVDRATKVLTEYRDIKPVFVNAIKEQNRILEESLEKIRRFMEE
>NC_016627.1|WP_014255353.1|2504270_2504726_-|transcriptional-regulator-NrdR
MKCPYCGFIEDKVIDSRPTDEGTAIRRRRECSKCQKRFTTYEKVESLPLMVIKKDKTREHFDREKLMNGLLRACEKRPVSVNDLEHLVESIELQLHNSLQREVTSQTIGEMVMERLKELDEVAYVRFASVYRQFKDINTFMDELRKLLKEK
>NC_016627.1|WP_014255354.1|2504952_2505222_-|YlmC/YmxH-family-sporulation-protein
MNRTSDFRQKEVINISDGRRLGFVCDVEINLETGKLDAIVIPAEGRLFSFFGKDNYYVIPWSKIKKIGEDIILVEFDERDMRRDYRGSY
>NC_016627.1|WP_014255355.1|2505391_2506165_-|RNA-polymerase-sporulation-sigma-factor-SigG
MLVNKVEICGVNTSKLPVLTNEQKKALFERMHKGDKSAREEFIKGNLRLVLSVIQRFNNRGEYVDDLFQVGCIGLIKAIDNFDVNQNVKFSTYAVPMIIGEIRRYLRDNNSIRVSRSLRDIAYKALQAKERLTNKNSKEPTIEELSKELGIPKEEIVFALDAIQDPISLFESVYHDGGDAIYVMDQVKDEKNNDENWLEGIALNEAMRKLNDREKLILNLRFFDGRTQMEVAEEIGISQAQVSRLEKTALTHMRKYI
>NC_016627.1|WP_014255356.1|2506333_2507068_-|RNA-polymerase-sporulation-sigma-factor-SigE
MILLKKARLFFWIKYINFLKRFKIHERFPVHYIGGSEALPPPLSSEEENYLLSKLEKKEYGVKTILIERNLRLVVYIARKFENTGVGVEDLISIGTIGLIKAINTFNPGKNIKLATYASRCIENEILMYLRRNSRMKTEISIDEPLNIDWDGNELLLSDILGTENDLIHRSIEDEVDKELLNNAMKKLSVREKKIMELRFGLSNGGEEKTQKEVADMLGISQSYISRLEKKIISRLKKEISRMV
>NC_016627.1|WP_014255357.1|2507107_2508004_-|sigma-E-processing-peptidase-SpoIIGA
MEIYLDVLVLENIVMNYLILLMTAKFSKNKTSHLRLFLAAFVGAIYVAFLVVYPSLDVYYTTITKIAISFAIVAIAFSFQRFTAFFKTMVMFYISTFIFAGAGFAFLYFNHSGGFIRDGFFYVYWNSKWTVMVLCVATVGIIVKIFWEIIQSRLVKDRLLLPLKIAFENGIINLSALVDTGNALFDPLTHSPVIVVEFNAIKSILPEEIQNIFEESKEDDLVRVTKIVSNSRWFSRFRIIPFTSLGKENGILIGFKPDYIEIGDKNERKGVTDVIVGIYNKALSKGENYNALLSPDLV
>NC_016627.1|WP_014255358.1|2508352_2508667_+|hypothetical-protein
MEEKILQALAELSNQFDSLRKDVNSKLSNLENKVDALQIQTKENTEILKSLVHSAEVNKAEHDRMDNDIAHIKGELESIREILVKVGIVTSSNWNEIDKLNAIK
>NC_016627.1|WP_014255359.1|2508783_2509878_-|cell-division-protein-FtsZ
MLEFDIDLEQFAQIRVVGVGGGGNNAVNRMISAGLRGVEFIAINTDKQALFLSKANTKIQIGDKLTKGLGAGANPEIGEKAANESRDEIAQAIKGADMVFVTAGMGGGTGTGAAPVVAQIAKEMGILTVGVVTKPFMFEGRKRMQHAERGIETLKGVVDTLVTIPNDRLLQVAEKKTSIVDAFKIADDVLRQGVQGISDLIAVPGLVNLDFADVKTIMLDTGLAHMGIGRASGENRAEEAAKQAILSPLLETSIEGARGVLLNITGGPDLGLFEVNTAAELVQKSADPDANIIFGAVIDENLKDELLITVIATGFDKVPTIRKQEKPAEKIGISSGRIIENEPDPQPMSDELEIPTFLRRNRFK
>NC_016627.1|WP_014255360.1|2510088_2511324_-|cell-division-protein-FtsA
MENIISCVDIGSSKICTLIARASDTGELEVLGKAMEPCSGIKKGIIVDIESTANSIKNCMIKAQSLANVEVDSAYVNIMGIHADIIHNKSGISISGEDREITVNDVRRVLQSAENVNLPQDRQVIDVIPIQYIVDGYDEIVDPVGMSGGKLEVEVDVVAGKITFVQNILKSMEKAGLKVNGFVLEGLAAAEVALTQEEKDMGVILIDVGGGITNISVIKNNRLVYFGAIPVGGDHISNDISIGLRIPYNEADKLKREYELALTSLIKNDQEITVNEINENKKKNIKVSEIVEIIEARVQEIFYLCKEQLKEANVLNGYGKGVVLAGGGISYIDGNIQLAYEMFDLPVRIASYRVSNISQQEFLIAAGCAKYIVNRFGAKESDCKGKKAKKKKERNPGGILKKLANLFNNLF
>NC_016627.1|WP_014255361.1|2511530_2511896_-|small-basic-family-protein
MLPLLGLIIGIILGIFIPYDIPAAYSNYVAIAILAALDSVFGGVLATLQKKFNLSVFLTGFFGNAVLAAILAYIGDKLGIQLYLAAVFAFGNRLFLNFAIIRRILLNKLSKKDNIINNTEN

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Crispr_ID: NC_016627_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_016627_3

3016571-3020204

Unclear

Consensus_repeat	Method
ATTTACATCCCACATAGTTAAAGAACAAC	PILER-CR
ATTTACATCCCACATAGTTAAAGAACAAC	CRISPRCasFinder
ATTTACATCCCACATAGTTAAAGAACAAC	CRT

55 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b2

The CRISPR arrays of NC_016627_3

>merge|NC_016627|3|3016571-3020204|PILER-CR,CRISPRCasFinder,CRT
ATTTACATCCCACATAGTTAAAGAACAACACCGACTTCGAAGTTATACTGGTCGTTTTGACAATGATTTACATCCCACATAGTTAAAGAACAACTGAAGTATAATTGTGCATTTTTGTTCTTTAAGAAGATTTACATCCCACATAGTTAAAGAACAACGTTGACAGCTAGCACTAGTTATAATGTAATAATTGTATTTACATCCCACATAGTTAAAGAACAACGAGCAATGGAAAAACTGCCTCGAACCTCATAGATGAATTTACATCCCACATAGTTAAAGAACAACTCATGTTCTTTACAGCTAAATCTTCGCTGATTATTACTATTTACATCCCACATAGTTAAAGAACAACTAACGGATTAATGAAAACCCCGAACTGTTGGTATAAATTTACATCCCACATAGTTAAAGAACAACCGGATATGTGCCATCCTTGACCTTCTCCCAGACATCATTTACATCCCACATAGTTAAAGAACAACTTAACTTCTTTATTTTTAATTGCATTTCTCCAATAATCATTTACATCCCACATAGTTAAAGAACAACGTACAGGAGTAAAAATGCCATTGGGTATAGCTACTATTTACATCCCACATAGTTAAAGAACAACTTAACTTATACAAAATTAAAAGACTTTCCAAATGGATTTACATCCCACATAGTTAAAGAACAACTGAAAAAGTATCAGATATGAATATTTTAATACAAAAATTTACATCCCACATAGTTAAAGAACAACGGTTCCTGGTGTAGGAGGTAAAGGCATTAATATTAATTTACATCCCACATAGTTAAAGAACAACTTAATTTCAATCATCTCCTTTTTTGTTATATAATAATTTACATCCCACATAGTTAAAGAACAACTGAGAAACTGGAGACAGAGATTGCGGAACTAAAGAAATTTACATCCCACATAGTTAAAGAACAACGGAATATGAATTCAGACCTAAAAATGCAGAATTTGTCATATTTACATCCCACATAGTTAAAGAACAACTTGAAGACCAGACAGTCTTCAAAGGAACAGCAAGATATGAATTTACATCCCACATAGTTAAAGAACAACGAAATTGTTTTTGTAATCAACCAATATGATTATTCATTTACATCCCACATAGTTAAAGAACAACTTTGTGGTTCTGGATTTTTATTAATCCTTCATTTTTATTTACATCCCACATAGTTAAAGAACAACGTTCTTGAGTTTGTATAGACAAACTTTTAAATTCTCCATTTACATCCCACATAGTTAAAGAACAACGAATATGTTGGAGATGGTTATACAAGCAGTTGAAAAATTTACATCCCACATAGTTAAAGAACAACTGGCTTGTAGCAAAGTCATATATTCCAACAATATCATTTACATCCCACATAGTTAAAGAACAACCTTTTGTTAGGGCGTATAAGCCGTATTTTGATGATACATTTACATCCCACATAGTTAAAGAACAACCAACCATCCACACTGTCGACTTCTCGACCAATCCACATTTACATCCCACATAGTTAAAGAACAACTATGATGGTACAAAGTGGTTCTTATCCCAATATGATAATTTACATCCCACATAGTTAAAGAACAACGCGATATAGTCAACACCCTTCGGCGTGACGAATGTCATTTACATCCCACATAGTTAAAGAACAACGACCCTATAAAAAGCATAAGTTCATATTCATTTTCATTTACATCCCACATAGTTAAAGAACAACCAACATAGATTATACAAATCCGAAGGTCCACGAGAATTTACATCCCACATAGTTAAAGAACAACTAAAAATATCAAATCCAGATGCTAAGCCAGAAGAAATATTTACATCCCACATAGTTAAAGAACAACTATAGAATAGCTTTGTCTACTGCAAGGCCAATAGACATTTACATCCCACATAGTTAAAGAACAACGTATTCGTTCTCAAAATCATAATCAATATTCTGCGTATTTACATCCCACATAGTTAAAGAACAACTCTTTTTTATTTGACAGTTCTTAAAAAAGATGTTAAACATTTACATCCCACATAGTTAAAGAACAACCGGTACCAAAGCCGTGACAGTGATACCGGCATGCCAATTTACATCCCACATAGTTAAAGAACAACTTTAGAAAATAAGATATATTCTTTAATGTCTAAGTTATTTACATCCCACATAGTTAAAGAACAACCGGCCCAACTGAATGTAACCAGTCTGAACTCATCTAATTTACATCCCACATAGTTAAAGAACAACCTTTGAGTCCTACAGATACGCTTGAAGTTACATATATATTTACATCCCACATAGTTAAAGAACAACAAGGGATAACGGCTCAGGAGGCAGAGAATATTGACCATTTACATCCCACATAGTTAAAGAACAACACTTCATATTCGTCCGCTGTAGGATGTGCCATGTGGATTTACATCCCACATAGTTAAAGAACAACGGGGAGTCGAACCCCTCGCCTGTTCTGTTTGGTAACGTATTTACATCCCACATAGTTAAAGAACAACCTTAAATTGTTGTCATAGATGTACTTCCAAATGTCAATTTACATCCCACATAGTTAAAGAACAACTCATATTTTATAAACGCAGTAAAAAAAGCCTGCACAATTTACATCCCACATAGTTAAAGAACAACTCAATTTAAAGTTAAATTTTCCGCAGTTTAATTTTTATTTACATCCCACATAGTTAAAGAACAACGACAACCCTAAACAAATGGAAAGTGATGCCCAAGAATATTTACATCCCACATAGTTAAAGAACAACTCAAAGTTAGAAGATGAAAACATCGAAAGATTTAAAGTATTTACATCCCACATAGTTAAAGAACAACCGTTATATGTATGCAAGACAACGATAAAGGTTATCTATTTACATCCCACATAGTTAAAGAACAACTTGTGCCGACTCTATTGGGAGCAGTGCAAAAGCTAAATTTACATCCCACATAGTTAAAGAACAACAGTGACATTATGCCGCTCGGAACTGGAATAGTTCTTTTACATTTACATCCCACATAGTTAAAGAACAACTTGATGTCAGGTTTATACTGCAGAACGGAGAAATTCATTTACATCCCACATAGTTAAAGAACAACGAAAATGGAAGAAGCAAAAGTAATTCAAGCATTACAATTTACATCCCACATAGTTAAAGAACAACTGGGTAAAAGCTTGGGATGGAATAAAAAATATATTTTTATTTACATCCCACATAGTTAAAGAACAACGGAGTAGCATGGAATAATGGATATAGAATTTCTTCGACATTTACATCCCACATAGTTAAAGAACAACCTGAAACGGTCCAGTTTATGCACAATCACAGCACCAAACATTTACATCCCACATAGTTAAAGAACAACTTTAAACTGCTTGCACAAAAGGCATAAGTGTTTATTATTTACATCCCACATAGTTAAAGAACAACGAGCCACCAGCACATACAAAACCTACACCATCAAGATTTACATCCCACATAGTTAAAGAACAACAGGCAAGTCTAGGAAAACCTCTGAAGCGTTGACGCCCTTTCCCATTTACATCCCACATAGTTAAAGAACAACCTAGACGATATTGATATTTATACAGGTCCTGGTCCATTTACATCCCACATAGTTAAAGAACAAC

>NC_016627|3|3|3016571-3020204|PILER-CR
ATTTACATCCCACATAGTTAAAGAACAAC	ACCGACTTCGAAGTTATACTGGTCGTTTTGACAATG
ATTTACATCCCACATAGTTAAAGAACAAC	TGAAGTATAATTGTGCATTTTTGTTCTTTAAGAAG
ATTTACATCCCACATAGTTAAAGAACAAC	GTTGACAGCTAGCACTAGTTATAATGTAATAATTGT
ATTTACATCCCACATAGTTAAAGAACAAC	GAGCAATGGAAAAACTGCCTCGAACCTCATAGATGA
ATTTACATCCCACATAGTTAAAGAACAAC	TCATGTTCTTTACAGCTAAATCTTCGCTGATTATTACT
ATTTACATCCCACATAGTTAAAGAACAAC	TAACGGATTAATGAAAACCCCGAACTGTTGGTATAA
ATTTACATCCCACATAGTTAAAGAACAAC	CGGATATGTGCCATCCTTGACCTTCTCCCAGACATC
ATTTACATCCCACATAGTTAAAGAACAAC	TTAACTTCTTTATTTTTAATTGCATTTCTCCAATAATC
ATTTACATCCCACATAGTTAAAGAACAAC	GTACAGGAGTAAAAATGCCATTGGGTATAGCTACT
ATTTACATCCCACATAGTTAAAGAACAAC	TTAACTTATACAAAATTAAAAGACTTTCCAAATGG
ATTTACATCCCACATAGTTAAAGAACAAC	TGAAAAAGTATCAGATATGAATATTTTAATACAAAA
ATTTACATCCCACATAGTTAAAGAACAAC	GGTTCCTGGTGTAGGAGGTAAAGGCATTAATATTA
ATTTACATCCCACATAGTTAAAGAACAAC	TTAATTTCAATCATCTCCTTTTTTGTTATATAATA
ATTTACATCCCACATAGTTAAAGAACAAC	TGAGAAACTGGAGACAGAGATTGCGGAACTAAAGAA
ATTTACATCCCACATAGTTAAAGAACAAC	GGAATATGAATTCAGACCTAAAAATGCAGAATTTGTCAT
ATTTACATCCCACATAGTTAAAGAACAAC	TTGAAGACCAGACAGTCTTCAAAGGAACAGCAAGATATGA
ATTTACATCCCACATAGTTAAAGAACAAC	GAAATTGTTTTTGTAATCAACCAATATGATTATTC
ATTTACATCCCACATAGTTAAAGAACAAC	TTTGTGGTTCTGGATTTTTATTAATCCTTCATTTTT
ATTTACATCCCACATAGTTAAAGAACAAC	GTTCTTGAGTTTGTATAGACAAACTTTTAAATTCTCC
ATTTACATCCCACATAGTTAAAGAACAAC	GAATATGTTGGAGATGGTTATACAAGCAGTTGAAAA
ATTTACATCCCACATAGTTAAAGAACAAC	TGGCTTGTAGCAAAGTCATATATTCCAACAATATC
ATTTACATCCCACATAGTTAAAGAACAAC	CTTTTGTTAGGGCGTATAAGCCGTATTTTGATGATAC
ATTTACATCCCACATAGTTAAAGAACAAC	CAACCATCCACACTGTCGACTTCTCGACCAATCCAC
ATTTACATCCCACATAGTTAAAGAACAAC	TATGATGGTACAAAGTGGTTCTTATCCCAATATGATA
ATTTACATCCCACATAGTTAAAGAACAAC	GCGATATAGTCAACACCCTTCGGCGTGACGAATGTC
ATTTACATCCCACATAGTTAAAGAACAAC	GACCCTATAAAAAGCATAAGTTCATATTCATTTTC
ATTTACATCCCACATAGTTAAAGAACAAC	CAACATAGATTATACAAATCCGAAGGTCCACGAGA
ATTTACATCCCACATAGTTAAAGAACAAC	TAAAAATATCAAATCCAGATGCTAAGCCAGAAGAAAT
ATTTACATCCCACATAGTTAAAGAACAAC	TATAGAATAGCTTTGTCTACTGCAAGGCCAATAGAC
ATTTACATCCCACATAGTTAAAGAACAAC	GTATTCGTTCTCAAAATCATAATCAATATTCTGCGT
ATTTACATCCCACATAGTTAAAGAACAAC	TCTTTTTTATTTGACAGTTCTTAAAAAAGATGTTAAAC
ATTTACATCCCACATAGTTAAAGAACAAC	CGGTACCAAAGCCGTGACAGTGATACCGGCATGCCA
ATTTACATCCCACATAGTTAAAGAACAAC	TTTAGAAAATAAGATATATTCTTTAATGTCTAAGTT
ATTTACATCCCACATAGTTAAAGAACAAC	CGGCCCAACTGAATGTAACCAGTCTGAACTCATCTA
ATTTACATCCCACATAGTTAAAGAACAAC	CTTTGAGTCCTACAGATACGCTTGAAGTTACATATAT
ATTTACATCCCACATAGTTAAAGAACAAC	AAGGGATAACGGCTCAGGAGGCAGAGAATATTGACC
ATTTACATCCCACATAGTTAAAGAACAAC	ACTTCATATTCGTCCGCTGTAGGATGTGCCATGTGG
ATTTACATCCCACATAGTTAAAGAACAAC	GGGGAGTCGAACCCCTCGCCTGTTCTGTTTGGTAACGT
ATTTACATCCCACATAGTTAAAGAACAAC	CTTAAATTGTTGTCATAGATGTACTTCCAAATGTCA
ATTTACATCCCACATAGTTAAAGAACAAC	TCATATTTTATAAACGCAGTAAAAAAAGCCTGCACA
ATTTACATCCCACATAGTTAAAGAACAAC	TCAATTTAAAGTTAAATTTTCCGCAGTTTAATTTTT
ATTTACATCCCACATAGTTAAAGAACAAC	GACAACCCTAAACAAATGGAAAGTGATGCCCAAGAAT
ATTTACATCCCACATAGTTAAAGAACAAC	TCAAAGTTAGAAGATGAAAACATCGAAAGATTTAAAGT
ATTTACATCCCACATAGTTAAAGAACAAC	CGTTATATGTATGCAAGACAACGATAAAGGTTATCT
ATTTACATCCCACATAGTTAAAGAACAAC	TTGTGCCGACTCTATTGGGAGCAGTGCAAAAGCTAA
ATTTACATCCCACATAGTTAAAGAACAAC	AGTGACATTATGCCGCTCGGAACTGGAATAGTTCTTTTAC
ATTTACATCCCACATAGTTAAAGAACAAC	TTGATGTCAGGTTTATACTGCAGAACGGAGAAATTC
ATTTACATCCCACATAGTTAAAGAACAAC	GAAAATGGAAGAAGCAAAAGTAATTCAAGCATTACA
ATTTACATCCCACATAGTTAAAGAACAAC	TGGGTAAAAGCTTGGGATGGAATAAAAAATATATTTTT
ATTTACATCCCACATAGTTAAAGAACAAC	GGAGTAGCATGGAATAATGGATATAGAATTTCTTCGAC
ATTTACATCCCACATAGTTAAAGAACAAC	CTGAAACGGTCCAGTTTATGCACAATCACAGCACCAAAC
ATTTACATCCCACATAGTTAAAGAACAAC	TTTAAACTGCTTGCACAAAAGGCATAAGTGTTTATT
ATTTACATCCCACATAGTTAAAGAACAAC	GAGCCACCAGCACATACAAAACCTACACCATCAAG
ATTTACATCCCACATAGTTAAAGAACAAC	AGGCAAGTCTAGGAAAACCTCTGAAGCGTTGACGCCCTTTCCC
ATTTACATCCCACATAGTTAAAGAACAAC	CTAGACGATATTGATATTTATACAGGTCCTGGTCC
ATTTACATCCCACATAGTTAAAGAACAAC

>NC_016627|3|3|3016571-3020204|CRISPRCasFinder
ATTTACATCCCACATAGTTAAAGAACAAC	ACCGACTTCGAAGTTATACTGGTCGTTTTGACAATG
ATTTACATCCCACATAGTTAAAGAACAAC	TGAAGTATAATTGTGCATTTTTGTTCTTTAAGAAG
ATTTACATCCCACATAGTTAAAGAACAAC	GTTGACAGCTAGCACTAGTTATAATGTAATAATTGT
ATTTACATCCCACATAGTTAAAGAACAAC	GAGCAATGGAAAAACTGCCTCGAACCTCATAGATGA
ATTTACATCCCACATAGTTAAAGAACAAC	TCATGTTCTTTACAGCTAAATCTTCGCTGATTATTACT
ATTTACATCCCACATAGTTAAAGAACAAC	TAACGGATTAATGAAAACCCCGAACTGTTGGTATAA
ATTTACATCCCACATAGTTAAAGAACAAC	CGGATATGTGCCATCCTTGACCTTCTCCCAGACATC
ATTTACATCCCACATAGTTAAAGAACAAC	TTAACTTCTTTATTTTTAATTGCATTTCTCCAATAATC
ATTTACATCCCACATAGTTAAAGAACAAC	GTACAGGAGTAAAAATGCCATTGGGTATAGCTACT
ATTTACATCCCACATAGTTAAAGAACAAC	TTAACTTATACAAAATTAAAAGACTTTCCAAATGG
ATTTACATCCCACATAGTTAAAGAACAAC	TGAAAAAGTATCAGATATGAATATTTTAATACAAAA
ATTTACATCCCACATAGTTAAAGAACAAC	GGTTCCTGGTGTAGGAGGTAAAGGCATTAATATTA
ATTTACATCCCACATAGTTAAAGAACAAC	TTAATTTCAATCATCTCCTTTTTTGTTATATAATA
ATTTACATCCCACATAGTTAAAGAACAAC	TGAGAAACTGGAGACAGAGATTGCGGAACTAAAGAA
ATTTACATCCCACATAGTTAAAGAACAAC	GGAATATGAATTCAGACCTAAAAATGCAGAATTTGTCAT
ATTTACATCCCACATAGTTAAAGAACAAC	TTGAAGACCAGACAGTCTTCAAAGGAACAGCAAGATATGA
ATTTACATCCCACATAGTTAAAGAACAAC	GAAATTGTTTTTGTAATCAACCAATATGATTATTC
ATTTACATCCCACATAGTTAAAGAACAAC	TTTGTGGTTCTGGATTTTTATTAATCCTTCATTTTT
ATTTACATCCCACATAGTTAAAGAACAAC	GTTCTTGAGTTTGTATAGACAAACTTTTAAATTCTCC
ATTTACATCCCACATAGTTAAAGAACAAC	GAATATGTTGGAGATGGTTATACAAGCAGTTGAAAA
ATTTACATCCCACATAGTTAAAGAACAAC	TGGCTTGTAGCAAAGTCATATATTCCAACAATATC
ATTTACATCCCACATAGTTAAAGAACAAC	CTTTTGTTAGGGCGTATAAGCCGTATTTTGATGATAC
ATTTACATCCCACATAGTTAAAGAACAAC	CAACCATCCACACTGTCGACTTCTCGACCAATCCAC
ATTTACATCCCACATAGTTAAAGAACAAC	TATGATGGTACAAAGTGGTTCTTATCCCAATATGATA
ATTTACATCCCACATAGTTAAAGAACAAC	GCGATATAGTCAACACCCTTCGGCGTGACGAATGTC
ATTTACATCCCACATAGTTAAAGAACAAC	GACCCTATAAAAAGCATAAGTTCATATTCATTTTC
ATTTACATCCCACATAGTTAAAGAACAAC	CAACATAGATTATACAAATCCGAAGGTCCACGAGA
ATTTACATCCCACATAGTTAAAGAACAAC	TAAAAATATCAAATCCAGATGCTAAGCCAGAAGAAAT
ATTTACATCCCACATAGTTAAAGAACAAC	TATAGAATAGCTTTGTCTACTGCAAGGCCAATAGAC
ATTTACATCCCACATAGTTAAAGAACAAC	GTATTCGTTCTCAAAATCATAATCAATATTCTGCGT
ATTTACATCCCACATAGTTAAAGAACAAC	TCTTTTTTATTTGACAGTTCTTAAAAAAGATGTTAAAC
ATTTACATCCCACATAGTTAAAGAACAAC	CGGTACCAAAGCCGTGACAGTGATACCGGCATGCCA
ATTTACATCCCACATAGTTAAAGAACAAC	TTTAGAAAATAAGATATATTCTTTAATGTCTAAGTT
ATTTACATCCCACATAGTTAAAGAACAAC	CGGCCCAACTGAATGTAACCAGTCTGAACTCATCTA
ATTTACATCCCACATAGTTAAAGAACAAC	CTTTGAGTCCTACAGATACGCTTGAAGTTACATATAT
ATTTACATCCCACATAGTTAAAGAACAAC	AAGGGATAACGGCTCAGGAGGCAGAGAATATTGACC
ATTTACATCCCACATAGTTAAAGAACAAC	ACTTCATATTCGTCCGCTGTAGGATGTGCCATGTGG
ATTTACATCCCACATAGTTAAAGAACAAC	GGGGAGTCGAACCCCTCGCCTGTTCTGTTTGGTAACGT
ATTTACATCCCACATAGTTAAAGAACAAC	CTTAAATTGTTGTCATAGATGTACTTCCAAATGTCA
ATTTACATCCCACATAGTTAAAGAACAAC	TCATATTTTATAAACGCAGTAAAAAAAGCCTGCACA
ATTTACATCCCACATAGTTAAAGAACAAC	TCAATTTAAAGTTAAATTTTCCGCAGTTTAATTTTT
ATTTACATCCCACATAGTTAAAGAACAAC	GACAACCCTAAACAAATGGAAAGTGATGCCCAAGAAT
ATTTACATCCCACATAGTTAAAGAACAAC	TCAAAGTTAGAAGATGAAAACATCGAAAGATTTAAAGT
ATTTACATCCCACATAGTTAAAGAACAAC	CGTTATATGTATGCAAGACAACGATAAAGGTTATCT
ATTTACATCCCACATAGTTAAAGAACAAC	TTGTGCCGACTCTATTGGGAGCAGTGCAAAAGCTAA
ATTTACATCCCACATAGTTAAAGAACAAC	AGTGACATTATGCCGCTCGGAACTGGAATAGTTCTTTTAC
ATTTACATCCCACATAGTTAAAGAACAAC	TTGATGTCAGGTTTATACTGCAGAACGGAGAAATTC
ATTTACATCCCACATAGTTAAAGAACAAC	GAAAATGGAAGAAGCAAAAGTAATTCAAGCATTACA
ATTTACATCCCACATAGTTAAAGAACAAC	TGGGTAAAAGCTTGGGATGGAATAAAAAATATATTTTT
ATTTACATCCCACATAGTTAAAGAACAAC	GGAGTAGCATGGAATAATGGATATAGAATTTCTTCGAC
ATTTACATCCCACATAGTTAAAGAACAAC	CTGAAACGGTCCAGTTTATGCACAATCACAGCACCAAAC
ATTTACATCCCACATAGTTAAAGAACAAC	TTTAAACTGCTTGCACAAAAGGCATAAGTGTTTATT
ATTTACATCCCACATAGTTAAAGAACAAC	GAGCCACCAGCACATACAAAACCTACACCATCAAG
ATTTACATCCCACATAGTTAAAGAACAAC	AGGCAAGTCTAGGAAAACCTCTGAAGCGTTGACGCCCTTTCCC
ATTTACATCCCACATAGTTAAAGAACAAC	CTAGACGATATTGATATTTATACAGGTCCTGGTCC
ATTTACATCCCACATAGTTAAAGAACAAC

>NC_016627|3|3|3016571-3020204|CRT
ATTTACATCCCACATAGTTAAAGAACAAC	ACCGACTTCGAAGTTATACTGGTCGTTTTGACAATG
ATTTACATCCCACATAGTTAAAGAACAAC	TGAAGTATAATTGTGCATTTTTGTTCTTTAAGAAG
ATTTACATCCCACATAGTTAAAGAACAAC	GTTGACAGCTAGCACTAGTTATAATGTAATAATTGT
ATTTACATCCCACATAGTTAAAGAACAAC	GAGCAATGGAAAAACTGCCTCGAACCTCATAGATGA
ATTTACATCCCACATAGTTAAAGAACAAC	TCATGTTCTTTACAGCTAAATCTTCGCTGATTATTACT
ATTTACATCCCACATAGTTAAAGAACAAC	TAACGGATTAATGAAAACCCCGAACTGTTGGTATAA
ATTTACATCCCACATAGTTAAAGAACAAC	CGGATATGTGCCATCCTTGACCTTCTCCCAGACATC
ATTTACATCCCACATAGTTAAAGAACAAC	TTAACTTCTTTATTTTTAATTGCATTTCTCCAATAATC
ATTTACATCCCACATAGTTAAAGAACAAC	GTACAGGAGTAAAAATGCCATTGGGTATAGCTACT
ATTTACATCCCACATAGTTAAAGAACAAC	TTAACTTATACAAAATTAAAAGACTTTCCAAATGG
ATTTACATCCCACATAGTTAAAGAACAAC	TGAAAAAGTATCAGATATGAATATTTTAATACAAAA
ATTTACATCCCACATAGTTAAAGAACAAC	GGTTCCTGGTGTAGGAGGTAAAGGCATTAATATTA
ATTTACATCCCACATAGTTAAAGAACAAC	TTAATTTCAATCATCTCCTTTTTTGTTATATAATA
ATTTACATCCCACATAGTTAAAGAACAAC	TGAGAAACTGGAGACAGAGATTGCGGAACTAAAGAA
ATTTACATCCCACATAGTTAAAGAACAAC	GGAATATGAATTCAGACCTAAAAATGCAGAATTTGTCAT
ATTTACATCCCACATAGTTAAAGAACAAC	TTGAAGACCAGACAGTCTTCAAAGGAACAGCAAGATATGA
ATTTACATCCCACATAGTTAAAGAACAAC	GAAATTGTTTTTGTAATCAACCAATATGATTATTC
ATTTACATCCCACATAGTTAAAGAACAAC	TTTGTGGTTCTGGATTTTTATTAATCCTTCATTTTT
ATTTACATCCCACATAGTTAAAGAACAAC	GTTCTTGAGTTTGTATAGACAAACTTTTAAATTCTCC
ATTTACATCCCACATAGTTAAAGAACAAC	GAATATGTTGGAGATGGTTATACAAGCAGTTGAAAA
ATTTACATCCCACATAGTTAAAGAACAAC	TGGCTTGTAGCAAAGTCATATATTCCAACAATATC
ATTTACATCCCACATAGTTAAAGAACAAC	CTTTTGTTAGGGCGTATAAGCCGTATTTTGATGATAC
ATTTACATCCCACATAGTTAAAGAACAAC	CAACCATCCACACTGTCGACTTCTCGACCAATCCAC
ATTTACATCCCACATAGTTAAAGAACAAC	TATGATGGTACAAAGTGGTTCTTATCCCAATATGATA
ATTTACATCCCACATAGTTAAAGAACAAC	GCGATATAGTCAACACCCTTCGGCGTGACGAATGTC
ATTTACATCCCACATAGTTAAAGAACAAC	GACCCTATAAAAAGCATAAGTTCATATTCATTTTC
ATTTACATCCCACATAGTTAAAGAACAAC	CAACATAGATTATACAAATCCGAAGGTCCACGAGA
ATTTACATCCCACATAGTTAAAGAACAAC	TAAAAATATCAAATCCAGATGCTAAGCCAGAAGAAAT
ATTTACATCCCACATAGTTAAAGAACAAC	TATAGAATAGCTTTGTCTACTGCAAGGCCAATAGAC
ATTTACATCCCACATAGTTAAAGAACAAC	GTATTCGTTCTCAAAATCATAATCAATATTCTGCGT
ATTTACATCCCACATAGTTAAAGAACAAC	TCTTTTTTATTTGACAGTTCTTAAAAAAGATGTTAAAC
ATTTACATCCCACATAGTTAAAGAACAAC	CGGTACCAAAGCCGTGACAGTGATACCGGCATGCCA
ATTTACATCCCACATAGTTAAAGAACAAC	TTTAGAAAATAAGATATATTCTTTAATGTCTAAGTT
ATTTACATCCCACATAGTTAAAGAACAAC	CGGCCCAACTGAATGTAACCAGTCTGAACTCATCTA
ATTTACATCCCACATAGTTAAAGAACAAC	CTTTGAGTCCTACAGATACGCTTGAAGTTACATATAT
ATTTACATCCCACATAGTTAAAGAACAAC	AAGGGATAACGGCTCAGGAGGCAGAGAATATTGACC
ATTTACATCCCACATAGTTAAAGAACAAC	ACTTCATATTCGTCCGCTGTAGGATGTGCCATGTGG
ATTTACATCCCACATAGTTAAAGAACAAC	GGGGAGTCGAACCCCTCGCCTGTTCTGTTTGGTAACGT
ATTTACATCCCACATAGTTAAAGAACAAC	CTTAAATTGTTGTCATAGATGTACTTCCAAATGTCA
ATTTACATCCCACATAGTTAAAGAACAAC	TCATATTTTATAAACGCAGTAAAAAAAGCCTGCACA
ATTTACATCCCACATAGTTAAAGAACAAC	TCAATTTAAAGTTAAATTTTCCGCAGTTTAATTTTT
ATTTACATCCCACATAGTTAAAGAACAAC	GACAACCCTAAACAAATGGAAAGTGATGCCCAAGAAT
ATTTACATCCCACATAGTTAAAGAACAAC	TCAAAGTTAGAAGATGAAAACATCGAAAGATTTAAAGT
ATTTACATCCCACATAGTTAAAGAACAAC	CGTTATATGTATGCAAGACAACGATAAAGGTTATCT
ATTTACATCCCACATAGTTAAAGAACAAC	TTGTGCCGACTCTATTGGGAGCAGTGCAAAAGCTAA
ATTTACATCCCACATAGTTAAAGAACAAC	AGTGACATTATGCCGCTCGGAACTGGAATAGTTCTTTTAC
ATTTACATCCCACATAGTTAAAGAACAAC	TTGATGTCAGGTTTATACTGCAGAACGGAGAAATTC
ATTTACATCCCACATAGTTAAAGAACAAC	GAAAATGGAAGAAGCAAAAGTAATTCAAGCATTACA
ATTTACATCCCACATAGTTAAAGAACAAC	TGGGTAAAAGCTTGGGATGGAATAAAAAATATATTTTT
ATTTACATCCCACATAGTTAAAGAACAAC	GGAGTAGCATGGAATAATGGATATAGAATTTCTTCGAC
ATTTACATCCCACATAGTTAAAGAACAAC	CTGAAACGGTCCAGTTTATGCACAATCACAGCACCAAAC
ATTTACATCCCACATAGTTAAAGAACAAC	TTTAAACTGCTTGCACAAAAGGCATAAGTGTTTATT
ATTTACATCCCACATAGTTAAAGAACAAC	GAGCCACCAGCACATACAAAACCTACACCATCAAG
ATTTACATCCCACATAGTTAAAGAACAAC	AGGCAAGTCTAGGAAAACCTCTGAAGCGTTGACGCCCTTTCCC
ATTTACATCCCACATAGTTAAAGAACAAC	CTAGACGATATTGATATTTATACAGGTCCTGGTCC
ATTTACATCCCACATAGTTAAAGAACAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_016627.1\|WP_014255737.1\|3006134_3008876_-\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NC_016627.1\|WP_081467047.1\|3022388_3023177_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853
NC_016627.1\|WP_014255750.1\|3031265_3031505_-\|hypothetical-protein	unknown	unknown	unknown
NC_016627.1\|WP_117405975.1\|3021028_3022426_+\|transposase	unknown	unknown	gnl\|CDD\|379252
NC_016627.1\|WP_027622797.1\|3020389_3020653_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_016627.1\|WP_014255743.1\|3013647_3015057_+\|hypothetical-protein	unknown	unknown	unknown
NC_016627.1\|WP_041715722.1\|3009007_3009592_-\|DUF5317-domain-containing-protein	unknown	unknown	gnl\|CDD\|379952
NC_016627.1\|WP_014255735.1\|3003484_3004651_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|224643
NC_016627.1\|WP_014255747.1\|3025931_3026681_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|273860
NC_016627.1\|WP_014255741.1\|3011262_3012594_+\|CCA-tRNA-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|223690
NC_016627.1\|WP_027622802.1\|3004689_3005967_-\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	unknown	unknown	gnl\|CDD\|223362
NC_016627.1\|WP_014255740.1\|3010143_3010446_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|188231
NC_016627.1\|WP_014254024.1\|3029555_3030845_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
NC_016627.1\|WP_014255748.1\|3026667_3027552_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NC_016627.1\|WP_014255746.1\|3023723_3025916_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NC_016627.1\|WP_014255739.1\|3009640_3010054_-\|hypothetical-protein	unknown	unknown	unknown
NC_016627.1\|WP_014255742.1\|3012590_3013514_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NC_016627.1\|WP_014255745.1\|3023169_3023703_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NC_016627.1\|WP_014254544.1\|3002015_3003233_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NC_016627.1\|WP_014255749.1\|3027551_3029141_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187884

Protein	Function_ID	Function_description	E-value
NC_016627.1\|WP_014255737.1\|3006134_3008876_-\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NC_016627.1\|WP_081467047.1\|3022388_3023177_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	3.96727e-118
NC_016627.1\|WP_027622797.1\|3020389_3020653_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.80036e-25
NC_016627.1\|WP_117405975.1\|3021028_3022426_+\|transposase	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	7.73692e-14
NC_016627.1\|WP_041715722.1\|3009007_3009592_-\|DUF5317-domain-containing-protein	gnl\|CDD\|379952	pfam17248, DUF5317, Family of unknown function (DUF5317). This is a family of unknown function found mainly in Bacteria. Members of this family have multiple trans-membrane domains with the majority typically constituted of 4 trans-membrane regions.	4.00846e-37
NC_016627.1\|WP_014255735.1\|3003484_3004651_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|224643	COG1729, COG1729, Uncharacterized protein conserved in bacteria [Function unknown].	1.46225e-08
NC_016627.1\|WP_014255747.1\|3025931_3026681_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	5.79855e-24
NC_016627.1\|WP_014255741.1\|3011262_3012594_+\|CCA-tRNA-nucleotidyltransferase	gnl\|CDD\|223690	COG0617, PcnB, tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis].	6.74138e-83
NC_016627.1\|WP_027622802.1\|3004689_3005967_-\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	gnl\|CDD\|223362	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism].	3.78686e-145
NC_016627.1\|WP_014255740.1\|3010143_3010446_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|188231	TIGR02531, conserved_hypothetical_protein, TrpR-related protein YerC/YecD. This model represents a protein subfamily found mostly in the Firmicutes (Bacillus and allies). This family is similar in sequence to the trp operon repressor TrpR described by TIGR01321, and represents a distinct clade within the broader family described by pfam01371. At least one species, Xylella fastidiosa, in the Proteobacteria, has a member of both this family and TIGR01321. Several genomes with a member of this family do not synthesize tryptophan, and members of this family should not be considered trp operon repressors without new evidence. [Unknown function, General].	7.79618e-46
NC_016627.1\|WP_014255748.1\|3026667_3027552_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	3.84219e-59
NC_016627.1\|WP_014255746.1\|3023723_3025916_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.25368e-66
NC_016627.1\|WP_014255745.1\|3023169_3023703_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	4.68797e-61
NC_016627.1\|WP_014255742.1\|3012590_3013514_+\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	2.38782e-67
NC_016627.1\|WP_014254024.1\|3029555_3030845_+\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	1.0531e-32
NC_016627.1\|WP_014254544.1\|3002015_3003233_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	2.08149e-127
NC_016627.1\|WP_014255749.1\|3027551_3029141_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187884	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	1.61084e-17

>NC_016627.1|WP_014255743.1|3013647_3015057_+|hypothetical-protein
MKKVMLVISILLLTITGCKRNINLPDNQTIVWKLLYDEDTLPYSHFVSEDSSITEYEIINKKPDDYNTLAVKEITCKKLFDASTQLKSCQTNDGLLVLAIPQELNVSLIKFDMSGKVVWERDVGVSGRVATEITLLDDGNIVFGVSDRLNSSSDSTSMPKGHVLCYSQKGKQQWQYTYEDNYLGRINYICQDDTRNLLCSGLVIRDDLPNLSTDIVITQLSPHGKLILETFFGGSKNESLESAVYSDRTGLIITGWTEFDDEDLTNGGKGATMHYIASVSETLAFNWVYNPETPLLYQHDQIQVQGRYISLSGFKTTENIDEITDDTKNIFCNYILDERGILIQEMEIENNSNPPLSAICLTKDQEVVFAFNTSKGSKIIIKNSLGETVRELACELTNTERVIPTADGGFIVKYKYPVKRIPTPAFVSYIWTDNATTLSCYDKNGQLVWQKTYDDYTDNILTDYLHVAF
>NC_016627.1|WP_014255742.1|3012590_3013514_+|alpha/beta-hydrolase
MTAGTFTFKSHDGEEIFTYEWFPKNTVLKGIVHITHGLSEHAGRYANFAAELNSSGYAVYAHDQRGHGKTAKNTDNLVHIGEGGWNSMQKDLLLLIDIIKSNHSDLPFFLFGHSMGSFILRNILQNNPPEVNGVILSGTGFYERIALNAGILLAKSMVKRKGGQKRSYYINKITFRAFNANIPNPRTFFDWISRDEKVVADFYNDPLCRINCSNNLFLELFKGLKTIEHPKNIEKISKNIPIFLVSGDNDPVGHWGKDVPELANLYKSIGVKEVRYKLYPGARHEIINEINKAEVIRDIIDWMNSIA
>NC_016627.1|WP_014255741.1|3011262_3012594_+|CCA-tRNA-nucleotidyltransferase
MTEHFSVKLPEEVAHILKALNDNNHQAYIVGGCVRDIILNKDPKDWDISTSATTDEIKAIFNKTIDTGIKHGTVSVVIGNKVVEVTSFRTFNPDESKSLITDLSHRDLTINSMAYHPEEGLLDPFSGLEDIKNAVIRAVGNPSDRFMEDPLRMLRAVRFSATLGFDIDKSTLDAIKSCSQLIVNISRERIRDELTKILISNRPFKFILLRDVQLLKYILPEFDICFDITQNHPYHIYNVAEHSLKAVSEIENDIGLRWAILLHDTGKAVTKFTDKDGTDHFYGHPEKSVDIAKNVLERLKFDNKTIAKVCRLIRHHDKRIQPDFKSVRKAVNTIGEDFFMDLLKVQEADKKGQNPEFLNTSLTELNKIKEIYKEISNEKHCLSVKDLKINGRDLIALGFRQSKEIGCILEKLLNNVLEKPELNTYNDLIEMAKSLKNQQGESL
>NC_016627.1|WP_014255740.1|3010143_3010446_-|helix-turn-helix-domain-containing-protein
MNSKLKDDMTDKLFEAILLLENIEECYNFFEDICTIAEIKALAQRLEVASMLRKGKTYTEISEVTGASTATISRVNRALNYGADGYKMILDRLENKKGSR
>NC_016627.1|WP_014255739.1|3009640_3010054_-|hypothetical-protein
MLRRLFISLLILSALTAEGIINIAEILCDPSVLTKEVIDFVLGYEGEFTAKQVQCLNNNRGLKASFAFFSSIKFSDESLKFHSNTTNIKSWFAVSSKSIKLVLFLPFLFVIFIAVQEIINKGIVFYHSDLSPPYCFN
>NC_016627.1|WP_041715722.1|3009007_3009592_-|DUF5317-domain-containing-protein
MLYIVVILAALAIGTIVSLINGSWPDFSNIKFEKAWLLFPAVVLQIISSLTESRGYRFGTITTVMVNGAVFVFVFLVIWFNRKYAGLWLIGIGALLNALVMMFNGGRMPVDISSLSTKAYMADALELIMKGADNKHVAINSATKLPALADIYSVPGFLGLGMPLISIGDIIIAAGLFLLCLQFMLKSRKAKTVY
>NC_016627.1|WP_014255737.1|3006134_3008876_-|preprotein-translocase-subunit-SecA
MKKLIEKIIGTYSDRELKRIMPIVDKIESLEEEMKALSDAELKNKTQEFKKRLADGETLDDILPEAFAVMREASWRVLGMKHFRVQLIGGIVLHQGRIAEMKTGEGKTLVATLPVYLNALEGKGVHVVTVNDYLAKRDSEWMGKVYNFLGLSVGLIVHGLTNAERRHAYSCDITYGTNNEFGFDYLRDNMVIYKEDMVQRDLHYAIVDEVDSILIDEARTPLIISGQGDKSTELYKIADSFVRRLKVKVFTELDDKEDNDDIDADYIVDEKAHTATLTAQGIKKAEAFFGIENLSDSENLTISHHINQALRAHGLMKADRDYVVKDGEIIIVDEFTGRLMYGRRYSDGLHQAIEAKEGVKVERESKTLATITFQNYFRMYKKLAGMTGTALTEEQEFRDIYKLDVIVIPTNKPVARVDLNDVVYKNEMGKFNAVVNDVVERHQKGQPVLIGTISIEKSELLSSMLKKRGIPHQVLNAKYHEKEAEIIAQAGKLGAVTIATNMAGRGTDIMLGGNPEYLAKQEMRKKGYSDELINQATGFNDTDDQEILAARAVFRELYDKFKEITNAEREKVVEAGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYISLEDDLMRLFGSDRLMGIVERLRLEDDQPIEATMLTNQIENAQRKVEGRNFSIRKNVLQYDDVMNKQREVIYGQRRKVLDGENLKDSFLKMFETIADIIVNLYCSENPHPDYWDWESIRSYAEGAYVPTGSLNFSKEEMENLTKESLREKILELITKRYEEKEEELGSELMRELERVVLLRIVDQKWMDHIDAMEQLKHGIHLRSYGQRDPVIEYKFEGFEMFEEMNRNIQFDAVKVILNTHINREQEAPKREKVAEPIEASHGDEVKKPVVKSQKEKVGRNDLCPCGSGKKYKKCCGANE
>NC_016627.1|WP_027622802.1|3004689_3005967_-|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase
MNYIEALNYIHGTVKFGIKLGLENIKTLLELMGNPQEKLKFVHVAGTNGKGSTVAFISNVLIEAGYKVGIYTSPCLERFNERIKVNNEEIDGDDLARITTFVKEHVDIMISKYNIYPTEFEIVTAIAFEYFYEMNCDIVVLEVGLGGRFDATNVINEALVSVITTISYDHMDRLGDTLEKIAFEKAGIIKNKGDVVLFPQGRDILEVIEKVCEEKNANLHIADFESIRIKQYSIDGQKFEYNGKSFEISLLGEHQVKNAVVALAALKILRDKGYKIPDDSIERGLVNARWPGRFEVLSKKPVFLIDGAHNKEGAENLAGVLKSYFPGKKIIFIIGALRDKDVESIIRPTVPLALEYITVAPDSSRALSPKEMSDFVLRYCKRVSVSDTIEGAIRTSLNRISSEDDVICAYGSLYYIGKIRSFFKH
>NC_016627.1|WP_014255735.1|3003484_3004651_-|tetratricopeptide-repeat-protein
MTDFKQEIKTYSPIDLDRLLKTNIDMPDNLKNSVLLYNKALDNIRIKSEDIAIIELKKAISLNPDFCEAINLLGLLYTTINENNLARNCFEKVLSIDPQDRKASEYLRLLDNDYKRPGNNIKVKHKEKSENKKSNVKNVKNKKKDNKKDSIFTELSYSISNILKMNAAKYLIGFLAGLLVFFAISTIAGSKESAKDVSNVIDNRRKNQSSIDYEEKYNQLAEENNALQKQLEDLQNQLEGLQKTAQNYTNLSQLLLIEKKVSGGDYVGAADMLVAFNAEGLNETEKEKYESLRKQAMEKAAQQMYNEGRDLYKKKQYGEALEKFNKVVAYVDEWKNSSATIYYIGVCHQELNDKDKALEAFNKVIERYPSSSFAKYAKSRVDSINSGT
>NC_016627.1|WP_014254544.1|3002015_3003233_-|IS256-family-transposase
MSTLTKEQIKQLVRENNFQSVSDINEYLKDIFKDIIQELLEAELEAKLGYAKDDVENKKTDNSRNGYTPKKIKSEFGEIDIQVPRDRKGEFQPKIIPKYQRNVSGIEEKVIALYARGMSTRDISQQIEELYGFSLSAEMVSKITDRIAPEIKEWQQRPLEPIYSFVFMDAIHYKVKDDGRIINRAAYVVLGVTIDGYKDILGIWIGDNESSKFWLGVLNDLKNRGVQDVLIFCVDGLTGLKEAINAAYPKSEVQRCIIHQLRNSFKYVPYKDLKAFSNDFKEVYHAINEEIALEKLYELKEKWGKEYPFAIRSWENNWDVISPFFKFPEEIRKIIYTTNIIEGLHRQFRKVTKTKTIFPTDSSLEKILYLASMNVVKKWTQRYKNWDRVLSQLVIQYPGRLEEYI
>NC_016627.1|WP_027622797.1|3020389_3020653_-|CRISPR-associated-endonuclease-Cas2
MFVVLTYDVEVKKVNKVRKLLKKYLIWTQNSVFEGEITEGKLQKCIGQIGKIIDKNEDSIYIYVVEIPKNINKIKIGKEKALDELIL
>NC_016627.1|WP_117405975.1|3021028_3022426_+|transposase
MNMSIVSQKVKEENRFSLTVDNFFKMFSVGYLLKKSNAYKDKGIPCLTVFKVLFELVFTGKNLFMNYKAESFDIPFARDVVYRFLNSIHINWQRFLYLLSAKVINHHIDRLTSDERVDAFVIDDSFYSRTRSKSVELLSWVKDHADGNKNKKGFRMLTLGWTDGNSFIPVAFNLLSSTNPRVCINPAKNTIDKRTVGFKRRQNALATSPESALSMLEQAVATGIKAKYVLFDSWFSFPATIIKICKMNLNVIAMVKDTPKIYYNFNGEKKSLREIYRTVRKRRGRSKYLASVMVELHDKEGNHIPAKIVFVRDRRNKSKWLALISTDTSLPETEIIRIYGKRWDIEVFFKMCKSYLKLAKEFQGRSYDMMVAHTTIVFSRYIMLAVENRNNTDLRTIGTLFYYCCDELEDIKFHEALQLIIEALKTTLQEKLLLTKETVNEFLNYFVTCLPVHIKAKLSVVSCES
>NC_016627.1|WP_081467047.1|3022388_3023177_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MNREYYVLNNGRFKRKENTIYFVDNTDLSRALPIEQIDCLHIFGEVDLNTKFLNYISEYSILLHFYNYYGFYSGSFYPRKKNISGLLTVRQSQHFLDKEKRLYLAKCFVQSAKYHIIRNLKNYKEITDDIYMDLEKETINDAAEIDELMGMEGRIRNTYYKAYNLFLKHGFQMNKREKRPPTDPINALISFGNSLMYTTVLGQIYHTQLDPSISYLHEPSTKRFSLSLDLSEIFKPLIVDPVIFNLINNRINFRRKQLIALP
>NC_016627.1|WP_014255745.1|3023169_3023703_-|CRISPR-associated-protein-Cas4
MSIDFEDYKTQGVKVNYYYICKRKLWLYSKGIKMEQLSDRVLSGKVLHETAYSRQKSREILIDDLLKLDFVEGDFVREIKLTSKMQDSDKMQLLYYLYYLKKKGIEKKGILNYVKEKKQEVIELNEGDETEIEKALVEIKTICNMEKPPPLEKKPICKKCAYYEFCFVKEVDGDLDE
>NC_016627.1|WP_014255746.1|3023723_3025916_-|CRISPR-associated-helicase/endonuclease-Cas3
MNKYLAKSDPEETIQQHTDKLLKNLELIKSIYPDLDINWQLLRVASLYHDLGKMNLKFQSKINGGKKYSDEVAHNLLSLAFLDKNELKKQFSEQEIKILAHAIAYHHERGDYEASNYNEEVEALKAEAEKFVYDKVKITTIKKISPKYFSNDRIYENSGCFFDYVKIKGLLNRLDYAASADIDVEIKNDFMCEKLENLKYNWNELQRYMIENREKNVVVVAQTGMGKTEAGLLWIGNNKGFFTLPLKTAINNIYKRFTEKIVGIENKELIGLLHSDTYSKYIENATDDEDIDEYFTKTKQLSLPITVCTLDQLFDFVFKYKGFEIKLATLSYSKIVIDEVQMYSPDLLAYLIIGLSYISKIGGKFAILTATLPGIVTDLLKEQLRNTGVSFEQPKPFINDQFIRHSIKIIDESINSSNIIEKYDGNNKILVICNTVKTAQKIYDELKNDEEFSQKCKNINLFHSRFIKKDRKEKEDEIVRFGKADCNESGIWITTQVVEASLDIDFDILFTELSDINGLFQRMGRCYRNRVWDKEGYNCYVFIGGNKKCSGVGEFIDEKIFEFSKEELKNIDGIMTETEKQKMIEKVYNTDKLKDTDYYNKVLKNIEYVQSFNGYEKNKEEVKKMFRNICNITILPSCVYDANKTEIDNLVSKIQNESDKKERRKLIDDLNGFTLDVNYYEVEKEPYSVLRISKHMEIPIYENFEYDNCLGLRRKSKNQSDDFKVNSSIL
>NC_016627.1|WP_014255747.1|3025931_3026681_-|type-I-B-CRISPR-associated-protein-Cas5
MKAVRLKLTQELVNYKVPTSFQLKETYPLPPYSTISGMVHSLCGYKEYHPLKISVQGKYLSKVNDLYTRYEFRPGMPFEAGRHQLEVNGFGISRGVATCELLTEVELLIHIIPEEQSIIHEIENAFKFPPEFPSLGRREDLVIINEVKVVDVNEKVLEDYIELDKNYSAYIPEKMLSNDSIKISGFAGLECGTRYNINKCYEKVNYGTKKNPKIFRKWEKVRVVYSSRISAIEDESILIDEDGNIVFAI
>NC_016627.1|WP_014255748.1|3026667_3027552_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MIKSMKPKGLIISMIFEAESANYGEGIGNVASLKKMARGNGDQYTYISRQALRYNIIEQLNEPIAEVKAEGSGDKKVIQFAPDATIKDYPEIDFFGYMKTKKGEGSATRTAKVRLSNAISLETFKGDLDFLTNKGLADRLNENMNIAQSEIHRSYYRYTVTADLEQIGIDEGDNIFLENSEKARRVNKLLDTISLLYRDIRGRREDLKPLFAIGGVYDVKNPIFQNALEVKDNRLIVSTIEGVLFDSIKKDTFCGLIEGKFSNDGEIKEKLNAVSMPEFFNILKRKVSEYYESC
>NC_016627.1|WP_014255749.1|3027551_3029141_-|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MSFIKIQLSDWLYNAGVIGLVNILKHANDQVDINGQEVTIKTNVLANFEAKYYKYFVDTYGKTMTFTKLINRIDKLLNIELDESKEKEIGDDIDFIKSKVSNNSAYKGIKDKIDLKKLEKPSKKVTSINKEILEELKYLLLENKKEILKSECIGYYDQKSKTSKAPNAIIDKYINTNMLDVGLGVNEVKEYLSNEEKLNFSCFQCGRGIQKIDKGLSFLNRMFFDTARKTSHVWNFVSDIDICPICKIVYYCVPAGFTTVFGNGIFVNYNQSVERAEKINLNIRHEILHSDESKRIYNAFGTMIRSLHEKINDSKKYDLADIQIVRCEDDKYKFNLLSKNVLYALYDSRDELNSLLNTGFQEVNTYFRIYDEVMKNLLNNVNLFILIHKVLVIKISSPKDAKYNESHIRNLIKINFKYMKGVGYMESTEKDIVKISSSAGYYLREAYKSKNSENKLNGICYRLLNALKTSNKSMFMDTILNCYLYTNKPVPTFITECLKDDNVFKTIGYAFVTGLIDGNKNENTDGGDN
>NC_016627.1|WP_014254024.1|3029555_3030845_+|IS110-family-transposase
MNFRPIAGIDVGKFFSEMAILSPTNEVVARMKIHHDSNTDVERAVELLNKTEKDFASRPFIVMESTGHYHKILFHSLCKAGFEVSVTNPIQTDSIKNIGIRKVKNDKVDARKIALLYRFQELKSTNIPNEDIECLRSLCRQYYKLSDELTAYKNRLTGIVDQLMLNFKDVFSNIFSKAAMAVLEEYPTPAHILKADRNKLISLIQKKSRKSLKWSTAKYELLVSKARDFAPLSIHNASNVIMLGVYISMIKTLEESLEKVLKSIRLLIAEDMAKDMPMLALTLELLQSLPGIGLLSAATILAEIGDFSAFKKPGKLVAYFGVDPSVMQSGEFTGTRNKMSKRGSRLLRRVLFTIALANIRTKRDKTACNPVLLEFYQQKCQSKPKKVALGAVMRKLVCIIFAVLRDRKPYQLRSPQEHAQMLAAKHTAA
>NC_016627.1|WP_014255750.1|3031265_3031505_-|hypothetical-protein
MPNNRVTFGTRLNVKGDLRMSNDSYSLYRMDFDGNEIVRFSKTINILEIKVIGQYVFFITKDGSLYKIDIWNGKECRIV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_016627_3	3.13\|3017380\|35\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3017380-3017414	35	NC_030925	Bacillus phage Shbh1, complete genome	23873-23907	7	0.8
NC_016627_3	3.13\|3017380\|35\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3017380-3017414	35	MK318083	Aeromonas phage Akh-2, complete genome	44324-44358	8	0.771
NC_016627_3	3.49\|3019738\|38\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3019738-3019775	38	MF775704	Lactococcus phage LP1502b, complete genome	13644-13681	8	0.789
NC_016627_3	3.49\|3019738\|38\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3019738-3019775	38	MF775705	Lactococcus phage LP1502c, complete genome	13664-13701	8	0.789
NC_016627_3	3.49\|3019738\|38\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3019738-3019775	38	NC_049424	Lactococcus phage LP1502a, complete genome	13664-13701	8	0.789
NC_016627_2	2.7\|2496649\|36\|NC_016627\|CRISPRCasFinder,CRT,PILER-CR	2496649-2496684	36	MN694257	Marine virus AFVG_250M1016, complete genome	20673-20708	9	0.75
NC_016627_2	2.7\|2496649\|36\|NC_016627\|CRISPRCasFinder,CRT,PILER-CR	2496649-2496684	36	MN694078	Marine virus AFVG_250M213, complete genome	20467-20502	9	0.75
NC_016627_2	2.7\|2496649\|36\|NC_016627\|CRISPRCasFinder,CRT,PILER-CR	2496649-2496684	36	MN693944	Marine virus AFVG_250M270, complete genome	19983-20018	9	0.75
NC_016627_2	2.7\|2496649\|36\|NC_016627\|CRISPRCasFinder,CRT,PILER-CR	2496649-2496684	36	MN693931	Marine virus AFVG_250M215, complete genome	20471-20506	9	0.75
NC_016627_2	2.7\|2496649\|36\|NC_016627\|CRISPRCasFinder,CRT,PILER-CR	2496649-2496684	36	MN694096	Marine virus AFVG_250M214, complete genome	18029-18064	9	0.75
NC_016627_3	3.10\|3017187\|35\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3017187-3017221	35	NZ_CP029996	Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence	4782-4816	9	0.743
NC_016627_3	3.10\|3017187\|35\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3017187-3017221	35	NZ_LS997975	Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1	60281-60315	9	0.743
NC_016627_3	3.10\|3017187\|35\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3017187-3017221	35	CP053317	Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence	105537-105571	9	0.743
NC_016627_3	3.10\|3017187\|35\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3017187-3017221	35	NC_019335	Salmonella sp. 14 plasmid p14-95A, complete sequence	19557-19591	9	0.743
NC_016627_3	3.10\|3017187\|35\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3017187-3017221	35	NC_019336	Salmonella sp. 40 plasmid p40-95A, complete sequence	5519-5553	9	0.743
NC_016627_3	3.10\|3017187\|35\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3017187-3017221	35	CP034708	Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence	69582-69616	9	0.743
NC_016627_3	3.10\|3017187\|35\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3017187-3017221	35	NZ_CP022136	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence	190-224	9	0.743
NC_016627_3	3.10\|3017187\|35\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3017187-3017221	35	NZ_CP022036	Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence	77157-77191	9	0.743
NC_016627_1	1.24\|2477986\|35\|NC_016627\|CRISPRCasFinder,CRT,PILER-CR	2477986-2478020	35	MN693530	Marine virus AFVG_25M373, complete genome	16435-16469	10	0.714
NC_016627_1	1.24\|2477986\|35\|NC_016627\|CRISPRCasFinder,CRT,PILER-CR	2477986-2478020	35	MN693144	Marine virus AFVG_25M372, complete genome	15700-15734	10	0.714
NC_016627_1	1.30\|2478424\|37\|NC_016627\|CRISPRCasFinder,CRT,PILER-CR	2478424-2478460	37	NZ_LR135376	Enterococcus faecium isolate E8172 plasmid 5	914-950	10	0.73
NC_016627_1	1.30\|2478424\|37\|NC_016627\|CRISPRCasFinder,CRT,PILER-CR	2478424-2478460	37	NZ_LR135377	Enterococcus faecium isolate E8172 plasmid 6	878-914	10	0.73
NC_016627_1	1.30\|2478424\|37\|NC_016627\|CRISPRCasFinder,CRT,PILER-CR	2478424-2478460	37	NZ_CP040742	Enterococcus faecium strain VRE1 plasmid pVRE1-VanA, complete sequence	119979-120015	10	0.73
NC_016627_1	1.30\|2478424\|37\|NC_016627\|CRISPRCasFinder,CRT,PILER-CR	2478424-2478460	37	NZ_CP035657	Enterococcus faecium strain UAMSEF_09 plasmid unnamed3, complete sequence	4561-4597	10	0.73
NC_016627_1	1.30\|2478424\|37\|NC_016627\|CRISPRCasFinder,CRT,PILER-CR	2478424-2478460	37	NZ_CP035663	Enterococcus faecium strain UAMSEF_20 plasmid unnamed3, complete sequence	4113-4149	10	0.73
NC_016627_1	1.30\|2478424\|37\|NC_016627\|CRISPRCasFinder,CRT,PILER-CR	2478424-2478460	37	NZ_CP035645	Enterococcus faecium strain UAMSEF_01 plasmid unnamed3, complete sequence	5467-5503	10	0.73
NC_016627_1	1.30\|2478424\|37\|NC_016627\|CRISPRCasFinder,CRT,PILER-CR	2478424-2478460	37	NZ_CP019210	Enterococcus faecium strain 2014-VREF-41 plasmid p41-2, complete sequence	38093-38129	10	0.73
NC_016627_1	1.30\|2478424\|37\|NC_016627\|CRISPRCasFinder,CRT,PILER-CR	2478424-2478460	37	NZ_AP022344	Enterococcus faecium strain KUHS13 plasmid pKO3, complete sequence	2106-2142	10	0.73
NC_016627_1	1.30\|2478424\|37\|NC_016627\|CRISPRCasFinder,CRT,PILER-CR	2478424-2478460	37	NZ_CP035651	Enterococcus faecium strain UAMSEF_08 plasmid unnamed3, complete sequence	1342-1378	10	0.73
NC_016627_3	3.17\|3017646\|35\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3017646-3017680	35	MK759854	Shigella phage DS8, complete genome	42947-42981	10	0.714
NC_016627_3	3.17\|3017646\|35\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3017646-3017680	35	MN692673	Salmonella phage VB_StyS_BS5, complete genome	7967-8001	10	0.714
NC_016627_3	3.55\|3020141\|35\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3020141-3020175	35	NZ_CP014630	Lactobacillus backii strain TMW 1.1988 plasmid L11988-6, complete sequence	7429-7463	10	0.714
NC_016627_3	3.17\|3017646\|35\|NC_016627\|PILER-CR,CRISPRCasFinder,CRT	3017646-3017680	35	NC_015704	Runella slithyformis DSM 19594 plasmid pRUNSL02, complete sequence	78543-78577	11	0.686

1. spacer 3.13|3017380|35|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to NC_030925 (Bacillus phage Shbh1, complete genome) position: , mismatch: 7, identity: 0.8

ttaatttcaatcatctccttttttgttatataata	CRISPR spacer
tccatttaaatcatctccttttttattatattttt	Protospacer
*. **** ****************.******  *

2. spacer 3.13|3017380|35|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to MK318083 (Aeromonas phage Akh-2, complete genome) position: , mismatch: 8, identity: 0.771

ttaatttcaatcatctccttttttgttatataata	CRISPR spacer
atgagtaaaatcatctccttttttgttataaaact	Protospacer
 *.* *  ********************** **.

3. spacer 3.49|3019738|38|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to MF775704 (Lactococcus phage LP1502b, complete genome) position: , mismatch: 8, identity: 0.789

tgggtaaaagcttgggatggaataaaaaatatattttt	CRISPR spacer
gctggaaaagcttgggatgcaataaaaaatgtatttaa	Protospacer
   * ************** **********.*****

4. spacer 3.49|3019738|38|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to MF775705 (Lactococcus phage LP1502c, complete genome) position: , mismatch: 8, identity: 0.789

tgggtaaaagcttgggatggaataaaaaatatattttt	CRISPR spacer
gctggaaaagcttgggatgcaataaaaaatgtatttaa	Protospacer
   * ************** **********.*****

5. spacer 3.49|3019738|38|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to NC_049424 (Lactococcus phage LP1502a, complete genome) position: , mismatch: 8, identity: 0.789

tgggtaaaagcttgggatggaataaaaaatatattttt	CRISPR spacer
gctggaaaagcttgggatgcaataaaaaatgtatttaa	Protospacer
   * ************** **********.*****

6. spacer 2.7|2496649|36|NC_016627|CRISPRCasFinder,CRT,PILER-CR matches to MN694257 (Marine virus AFVG_250M1016, complete genome) position: , mismatch: 9, identity: 0.75

gttcgcctgcaaagttatttcctattctagcaattg	CRISPR spacer
ttatacctgcaaagttttttcttattctagcattgt	Protospacer
 * ..*********** ****.********** *

7. spacer 2.7|2496649|36|NC_016627|CRISPRCasFinder,CRT,PILER-CR matches to MN694078 (Marine virus AFVG_250M213, complete genome) position: , mismatch: 9, identity: 0.75

gttcgcctgcaaagttatttcctattctagcaattg	CRISPR spacer
ttatacctgcaaagttttttcttattctagcattgt	Protospacer
 * ..*********** ****.********** *

8. spacer 2.7|2496649|36|NC_016627|CRISPRCasFinder,CRT,PILER-CR matches to MN693944 (Marine virus AFVG_250M270, complete genome) position: , mismatch: 9, identity: 0.75

gttcgcctgcaaagttatttcctattctagcaattg	CRISPR spacer
ttatacctgcaaagttttttcttattctagcattgt	Protospacer
 * ..*********** ****.********** *

9. spacer 2.7|2496649|36|NC_016627|CRISPRCasFinder,CRT,PILER-CR matches to MN693931 (Marine virus AFVG_250M215, complete genome) position: , mismatch: 9, identity: 0.75

gttcgcctgcaaagttatttcctattctagcaattg	CRISPR spacer
ttatacctgcaaagttttttcttattctagcattgt	Protospacer
 * ..*********** ****.********** *

10. spacer 2.7|2496649|36|NC_016627|CRISPRCasFinder,CRT,PILER-CR matches to MN694096 (Marine virus AFVG_250M214, complete genome) position: , mismatch: 9, identity: 0.75

gttcgcctgcaaagttatttcctattctagcaattg	CRISPR spacer
ttatacctgcaaagttttttcttattctagcattgt	Protospacer
 * ..*********** ****.********** *

11. spacer 3.10|3017187|35|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029996 (Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence) position: , mismatch: 9, identity: 0.743

ttaacttatacaaaattaaaagactttccaaatgg	CRISPR spacer
aaaactgataaaaaattaaaagactttactgctga	Protospacer
  **** *** **************** * . **.

12. spacer 3.10|3017187|35|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LS997975 (Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1) position: , mismatch: 9, identity: 0.743

ttaacttatacaaaattaaaagactttccaaatgg	CRISPR spacer
aaaactgataaaaaattaaaagactttactgctga	Protospacer
  **** *** **************** * . **.

13. spacer 3.10|3017187|35|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to CP053317 (Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

ttaacttatacaaaattaaaagactttccaaatgg	CRISPR spacer
aaaactgataaaaaattaaaagactttactgctga	Protospacer
  **** *** **************** * . **.

14. spacer 3.10|3017187|35|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to NC_019335 (Salmonella sp. 14 plasmid p14-95A, complete sequence) position: , mismatch: 9, identity: 0.743

ttaacttatacaaaattaaaagactttccaaatgg	CRISPR spacer
aaaactgataaaaaattaaaagactttactgctga	Protospacer
  **** *** **************** * . **.

15. spacer 3.10|3017187|35|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to NC_019336 (Salmonella sp. 40 plasmid p40-95A, complete sequence) position: , mismatch: 9, identity: 0.743

ttaacttatacaaaattaaaagactttccaaatgg	CRISPR spacer
aaaactgataaaaaattaaaagactttactgctga	Protospacer
  **** *** **************** * . **.

16. spacer 3.10|3017187|35|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to CP034708 (Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence) position: , mismatch: 9, identity: 0.743

ttaacttatacaaaattaaaagactttccaaatgg	CRISPR spacer
aaaactgataaaaaattaaaagactttactgctga	Protospacer
  **** *** **************** * . **.

17. spacer 3.10|3017187|35|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022136 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

ttaacttatacaaaattaaaagactttccaaatgg	CRISPR spacer
aaaactgataaaaaattaaaagactttactgctga	Protospacer
  **** *** **************** * . **.

18. spacer 3.10|3017187|35|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022036 (Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence) position: , mismatch: 9, identity: 0.743

ttaacttatacaaaattaaaagactttccaaatgg	CRISPR spacer
aaaactgataaaaaattaaaagactttactgctga	Protospacer
  **** *** **************** * . **.

19. spacer 1.24|2477986|35|NC_016627|CRISPRCasFinder,CRT,PILER-CR matches to MN693530 (Marine virus AFVG_25M373, complete genome) position: , mismatch: 10, identity: 0.714

gaagaagaacaaagaaaactttgggaagatagcaa	CRISPR spacer
actggaaaacaaagaaaactttggcaagacagatt	Protospacer
.  *.*.***************** ****.**

20. spacer 1.24|2477986|35|NC_016627|CRISPRCasFinder,CRT,PILER-CR matches to MN693144 (Marine virus AFVG_25M372, complete genome) position: , mismatch: 10, identity: 0.714

gaagaagaacaaagaaaactttgggaagatagcaa	CRISPR spacer
actggaaaacaaagaaaactttggcaagacagatt	Protospacer
.  *.*.***************** ****.**

21. spacer 1.30|2478424|37|NC_016627|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR135376 (Enterococcus faecium isolate E8172 plasmid 5) position: , mismatch: 10, identity: 0.73

ctgtctttccctcctgatacagaaaagtatatattat	CRISPR spacer
atagaatttcctcctgatacagaaaaatatatagaaa	Protospacer
 *.   **.*****************.******  *

22. spacer 1.30|2478424|37|NC_016627|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR135377 (Enterococcus faecium isolate E8172 plasmid 6) position: , mismatch: 10, identity: 0.73

ctgtctttccctcctgatacagaaaagtatatattat	CRISPR spacer
atagaatttcctcctgatacagaaaaatatatagaaa	Protospacer
 *.   **.*****************.******  *

23. spacer 1.30|2478424|37|NC_016627|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040742 (Enterococcus faecium strain VRE1 plasmid pVRE1-VanA, complete sequence) position: , mismatch: 10, identity: 0.73

ctgtctttccctcctgatacagaaaagtatatattat	CRISPR spacer
atagaatttcctcctgatacagaaaaatatatagaaa	Protospacer
 *.   **.*****************.******  *

24. spacer 1.30|2478424|37|NC_016627|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035657 (Enterococcus faecium strain UAMSEF_09 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.73

ctgtctttccctcctgatacagaaaagtatatattat	CRISPR spacer
atagaatttcctcctgatacagaaaaatatatagaaa	Protospacer
 *.   **.*****************.******  *

25. spacer 1.30|2478424|37|NC_016627|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035663 (Enterococcus faecium strain UAMSEF_20 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.73

ctgtctttccctcctgatacagaaaagtatatattat	CRISPR spacer
atagaatttcctcctgatacagaaaaatatatagaaa	Protospacer
 *.   **.*****************.******  *

26. spacer 1.30|2478424|37|NC_016627|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035645 (Enterococcus faecium strain UAMSEF_01 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.73

ctgtctttccctcctgatacagaaaagtatatattat	CRISPR spacer
atagaatttcctcctgatacagaaaaatatatagaaa	Protospacer
 *.   **.*****************.******  *

27. spacer 1.30|2478424|37|NC_016627|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019210 (Enterococcus faecium strain 2014-VREF-41 plasmid p41-2, complete sequence) position: , mismatch: 10, identity: 0.73

ctgtctttccctcctgatacagaaaagtatatattat	CRISPR spacer
atagaatttcctcctgatacagaaaaatatatagaaa	Protospacer
 *.   **.*****************.******  *

28. spacer 1.30|2478424|37|NC_016627|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022344 (Enterococcus faecium strain KUHS13 plasmid pKO3, complete sequence) position: , mismatch: 10, identity: 0.73

ctgtctttccctcctgatacagaaaagtatatattat	CRISPR spacer
atagaatttcctcctgatacagaaaaatatatagaaa	Protospacer
 *.   **.*****************.******  *

29. spacer 1.30|2478424|37|NC_016627|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035651 (Enterococcus faecium strain UAMSEF_08 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.73

ctgtctttccctcctgatacagaaaagtatatattat	CRISPR spacer
atagaatttcctcctgatacagaaaaatatatagaaa	Protospacer
 *.   **.*****************.******  *

30. spacer 3.17|3017646|35|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to MK759854 (Shigella phage DS8, complete genome) position: , mismatch: 10, identity: 0.714

gaaattgtttttgtaatcaaccaatatgattattc	CRISPR spacer
caagaactttttgtaatcaacgcatatgattacat	Protospacer
 **.   **************  *********. .

31. spacer 3.17|3017646|35|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to MN692673 (Salmonella phage VB_StyS_BS5, complete genome) position: , mismatch: 10, identity: 0.714

gaaattgtttttgtaatcaaccaatatgattattc	CRISPR spacer
caagaattttttgtaatcaacgcatatgattacat	Protospacer
 **.   **************  *********. .

32. spacer 3.55|3020141|35|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014630 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-6, complete sequence) position: , mismatch: 10, identity: 0.714

ctagacgatattgatatttatacaggtcctggtcc	CRISPR spacer
tttgcatttaatgatatttatacacgtcctggttt	Protospacer
.* *    ** ************* ********..

33. spacer 3.17|3017646|35|NC_016627|PILER-CR,CRISPRCasFinder,CRT matches to NC_015704 (Runella slithyformis DSM 19594 plasmid pRUNSL02, complete sequence) position: , mismatch: 11, identity: 0.686

gaaattgtttttgtaatcaaccaatatgattattc	CRISPR spacer
attcctgttattgtaatcaaccaaaatgattccgt	Protospacer
.   .**** ************** ****** . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

331888 : 377113

Staphylococcus_phage(10.0%)

tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014253683.1\|331888_333511_+\|transposase	IS1182 family transposase	A0A146ICT8	Staphylococcus_phage	1.6e-58	30.1
WP_014253684.1\|334174_334957_+	dockerin-like protein	NA	NA	NA	NA
WP_014253685.1\|335014_335728_-	C40 family peptidase	NA	NA	NA	NA
WP_014253686.1\|335972_336224_+	sporulation transcriptional regulator SpoIIID	M9Q261	Clostridium_phage	1.1e-14	48.0
WP_014253687.1\|336652_337687_+	rod shape-determining protein	NA	NA	NA	NA
WP_014253688.1\|337825_338605_+	flagellar hook-basal body protein	NA	NA	NA	NA
WP_014253689.1\|338688_339489_+	flagellar basal-body rod protein FlgG	NA	NA	NA	NA
WP_014253690.1\|339529_339901_+	rod-binding protein	NA	NA	NA	NA
WP_014253691.1\|340150_340585_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_014253692.1\|340726_342142_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA
WP_014253693.1\|342650_343463_+	pur operon repressor	NA	NA	NA	NA
WP_014253694.1\|343774_344062_+	septation regulator SpoVG	NA	NA	NA	NA
WP_014253695.1\|344530_345910_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7P8	Chrysochromulina_ericina_virus	1.3e-32	34.6
WP_014253696.1\|346221_347190_+	ribose-phosphate diphosphokinase	A0A1V0SHF7	Hokovirus	5.2e-44	34.2
WP_041715362.1\|347384_347957_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_014253698.1\|347966_351500_+	transcription-repair coupling factor	NA	NA	NA	NA
WP_014253699.1\|351698_352775_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_014253700.1\|352974_353529_+	stage V sporulation protein T	A0A2I7SC16	Paenibacillus_phage	5.6e-11	70.6
WP_014253701.1\|353634_354006_-	L,D-transpeptidase	NA	NA	NA	NA
WP_014253702.1\|354430_355231_+	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_014253703.1\|355378_355657_+	HU family DNA-binding protein	A7KV42	Bacillus_phage	1.9e-23	62.9
WP_014253704.1\|355909_356149_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA
WP_014253705.1\|356443_356737_+	sporulation protein YabP	NA	NA	NA	NA
WP_014253706.1\|356959_357469_+	spore cortex biosynthesis protein YabQ	NA	NA	NA	NA
WP_014253707.1\|357649_357928_+	septum formation initiator family protein	NA	NA	NA	NA
WP_014253708.1\|358018_358447_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_014253709.1\|359100_359556_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	1.5e-17	37.6
WP_014253710.1\|360338_361778_-	TrkH family potassium uptake protein	NA	NA	NA	NA
WP_014253711.1\|361824_363222_-	Trk system potassium transporter TrkA	NA	NA	NA	NA
WP_014253712.1\|363601_364672_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	4.2e-55	37.3
WP_014253713.1\|365011_366229_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.7e-55	54.3
WP_014253714.1\|366860_367214_+\|transposase	transposase	NA	NA	NA	NA
WP_014253715.1\|367210_367564_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.0e-14	39.8
WP_014253716.1\|369234_369519_+	hypothetical protein	NA	NA	NA	NA
WP_169313371.1\|370198_370606_-	DUF4240 domain-containing protein	NA	NA	NA	NA
WP_014253718.1\|371021_373478_-	cellulase family glycosylhydrolase	NA	NA	NA	NA
WP_014253719.1\|373867_374728_+	hypothetical protein	NA	NA	NA	NA
WP_014253720.1\|375024_375459_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_081467081.1\|375661_377113_+\|transposase	IS21 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

786463 : 823550

Moraxella_phage(18.18%)

capsid,tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014254010.1\|786463_787759_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.1e-147	62.3
WP_014254012.1\|788567_790247_+\|protease	ATP-dependent protease LonB	A0A0R6PGP8	Moraxella_phage	1.9e-17	37.7
WP_014254013.1\|790546_791569_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	1.7e-74	45.5
WP_014254014.1\|792219_793554_+	radical SAM protein	NA	NA	NA	NA
WP_014254015.1\|793582_794260_-	lytic transglycosylase domain-containing protein	A0A0H3V0Q1	Geobacillus_virus	1.1e-37	63.9
WP_014254016.1\|794393_794717_-	hypothetical protein	NA	NA	NA	NA
WP_014254017.1\|794941_795406_+	DUF402 domain-containing protein	NA	NA	NA	NA
WP_014254018.1\|795473_796310_+	PHP domain-containing protein	NA	NA	NA	NA
WP_014254019.1\|796671_797136_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.4e-39	52.7
WP_169313373.1\|799149_799395_-\|capsid	minor capsid protein	NA	NA	NA	NA
WP_014254021.1\|799408_800257_-	hypothetical protein	NA	NA	NA	NA
WP_014254022.1\|800397_800607_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_014254023.1\|800646_801606_+	DUF4373 domain-containing protein	H7BWC5	unidentified_phage	4.7e-21	45.4
WP_014254024.1\|801824_803114_-\|transposase	IS110 family transposase	A0A0U3ULR1	Bacillus_phage	2.4e-36	29.1
WP_148263817.1\|804828_805125_-	hypothetical protein	NA	NA	NA	NA
WP_014254026.1\|805563_805971_+	hypothetical protein	NA	NA	NA	NA
WP_014254027.1\|805957_806440_+	hypothetical protein	NA	NA	NA	NA
WP_014254028.1\|806420_807029_+	hypothetical protein	NA	NA	NA	NA
WP_014254029.1\|807114_807897_+	DNA-directed RNA polymerase specialized sigma subunit	NA	NA	NA	NA
WP_014254030.1\|807929_808334_+	hypothetical protein	NA	NA	NA	NA
WP_014254031.1\|808379_808556_-	hypothetical protein	NA	NA	NA	NA
WP_014254032.1\|808571_809081_-	hypothetical protein	NA	NA	NA	NA
WP_014254033.1\|809114_809483_-	hypothetical protein	NA	NA	NA	NA
WP_014254034.1\|809667_809895_+	helix-turn-helix transcriptional regulator	A0A2K5B261	Erysipelothrix_phage	9.6e-10	44.3
WP_014254035.1\|809903_810080_+	hypothetical protein	NA	NA	NA	NA
WP_014254036.1\|810765_811194_+	DUF4375 domain-containing protein	NA	NA	NA	NA
WP_014254037.1\|811262_811703_+	hypothetical protein	NA	NA	NA	NA
WP_041714905.1\|812172_812772_+	hypothetical protein	NA	NA	NA	NA
WP_014254038.1\|813235_813448_+	hypothetical protein	NA	NA	NA	NA
WP_027622199.1\|813927_815079_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	5.6e-21	30.1
WP_014254039.1\|815573_816257_+	epoxyqueuosine reductase	NA	NA	NA	NA
WP_014254040.1\|816391_816706_-	hypothetical protein	NA	NA	NA	NA
WP_014254041.1\|816959_817406_+	hypothetical protein	NA	NA	NA	NA
WP_014254042.1\|817795_817984_+	hypothetical protein	NA	NA	NA	NA
WP_014254043.1\|817961_818768_-	carbohydrate-binding protein	NA	NA	NA	NA
WP_051411270.1\|818875_819625_-	hypothetical protein	NA	NA	NA	NA
WP_014254045.1\|820465_822037_+	DnaJ domain-containing protein	A0A2K9L1L4	Tupanvirus	1.1e-06	49.2
WP_014254046.1\|822332_823550_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.7e-55	54.3

DBSCAN-SWA_3

1673523 : 1740566

Geobacillus_virus(18.18%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014254716.1\|1673523_1674489_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_014254717.1\|1674490_1675354_+\|protease	protease modulator HflC	NA	NA	NA	NA
WP_041714990.1\|1675571_1677431_+	spore germination protein	NA	NA	NA	NA
WP_014254719.1\|1677414_1678608_+	endospore germination permease	NA	NA	NA	NA
WP_014254720.1\|1678591_1679881_+	Ger(x)C family spore germination protein	NA	NA	NA	NA
WP_014254722.1\|1680215_1681133_+	hypothetical protein	NA	NA	NA	NA
WP_014254723.1\|1681140_1682262_+	hypothetical protein	NA	NA	NA	NA
WP_014254724.1\|1682455_1684606_+	PAS domain S-box protein	W8CYF6	Bacillus_phage	4.7e-29	31.4
WP_014254725.1\|1685047_1685863_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA
WP_014254726.1\|1685874_1686315_+	ribonuclease HI	A0A0H3UZB5	Geobacillus_virus	3.3e-30	50.7
WP_014254727.1\|1686329_1686878_+	NUDIX hydrolase	NA	NA	NA	NA
WP_014254728.1\|1687209_1687848_+	stage II sporulation protein M	NA	NA	NA	NA
WP_014254729.1\|1688214_1689099_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	1.7e-38	34.3
WP_014254730.1\|1689394_1690561_+	phosphopentomutase	NA	NA	NA	NA
WP_014254731.1\|1690581_1691883_+	pyrimidine-nucleoside phosphorylase	A0A0H3UZD4	Geobacillus_virus	8.3e-122	57.2
WP_081467088.1\|1692098_1693187_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	6.6e-40	33.6
WP_014254733.1\|1693516_1694548_+	glycerophosphoryl diester phosphodiesterase membrane domain-containing protein	NA	NA	NA	NA
WP_014254734.1\|1694540_1695293_+	hypothetical protein	NA	NA	NA	NA
WP_014254735.1\|1695325_1696342_+	DUF4350 domain-containing protein	NA	NA	NA	NA
WP_014254736.1\|1696341_1697334_+	MoxR family ATPase	NA	NA	NA	NA
WP_014254737.1\|1697360_1698671_+	DUF58 domain-containing protein	NA	NA	NA	NA
WP_052306580.1\|1698728_1699547_-	stage II sporulation protein M	NA	NA	NA	NA
WP_169313379.1\|1699558_1699696_-	hypothetical protein	NA	NA	NA	NA
WP_014254738.1\|1699927_1700683_+	RDD family protein	NA	NA	NA	NA
WP_014253901.1\|1701523_1702594_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.0e-56	37.6
WP_041714992.1\|1702652_1702946_+	hypothetical protein	NA	NA	NA	NA
WP_014254739.1\|1703036_1705130_+	glycoside hydrolase family 11 protein	NA	NA	NA	NA
WP_014254740.1\|1705573_1706887_+	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_014254741.1\|1707086_1708916_+	M28 family peptidase	NA	NA	NA	NA
WP_014254742.1\|1708937_1711568_+	CBS domain-containing protein	E1A2I5	Aeromonas_phage	5.0e-17	34.9
WP_014254743.1\|1711571_1712228_+\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_014254744.1\|1712359_1713388_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_014254745.1\|1713441_1714236_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	6.8e-10	25.0
WP_014254746.1\|1714291_1714882_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA
WP_117405977.1\|1714962_1715631_+	DUF2953 domain-containing protein	NA	NA	NA	NA
WP_014254748.1\|1715750_1716236_+	GerW family sporulation protein	NA	NA	NA	NA
WP_041715539.1\|1716430_1717138_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_014254750.1\|1717252_1717429_-	DUF1540 domain-containing protein	NA	NA	NA	NA
WP_014254751.1\|1717630_1718458_+	polyamine aminopropyltransferase	NA	NA	NA	NA
WP_014254752.1\|1718468_1719338_+	agmatinase	NA	NA	NA	NA
WP_014254753.1\|1719566_1720133_+	class I SAM-dependent methyltransferase	A0A2H4PQV0	Staphylococcus_phage	3.9e-36	43.9
WP_014254754.1\|1720216_1720948_-	PilZ domain-containing protein	NA	NA	NA	NA
WP_014254755.1\|1721266_1722817_+	methylmalonyl-CoA carboxyltransferase	NA	NA	NA	NA
WP_014254756.1\|1722919_1723090_+	hypothetical protein	NA	NA	NA	NA
WP_014254757.1\|1723103_1723502_+	biotin/lipoyl-binding protein	NA	NA	NA	NA
WP_014254758.1\|1723602_1725000_+	oxaloacetate decarboxylase subunit alpha	NA	NA	NA	NA
WP_014254759.1\|1725054_1725693_-	hypothetical protein	NA	NA	NA	NA
WP_014254760.1\|1725989_1728326_+	fibronectin type III domain-containing protein	NA	NA	NA	NA
WP_014254761.1\|1728337_1737262_+	RHS repeat-associated core domain-containing protein	NA	NA	NA	NA
WP_014254762.1\|1737274_1737712_+	DUF4304 domain-containing protein	NA	NA	NA	NA
WP_014254763.1\|1737913_1738198_-	hypothetical protein	NA	NA	NA	NA
WP_014254764.1\|1738194_1739799_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.3e-71	37.1
WP_014254765.1\|1739862_1740216_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	5.9e-14	39.8
WP_014254766.1\|1740212_1740566_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1743915 : 1814507

Leptospira_phage(27.27%)

tRNA,capsid,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014254770.1\|1743915_1745229_+\|capsid	phage major capsid protein	NA	NA	NA	NA
WP_041734483.1\|1745553_1745856_+	hypothetical protein	NA	NA	NA	NA
WP_041714997.1\|1746183_1747440_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_027621376.1\|1747697_1747943_+	hypothetical protein	NA	NA	NA	NA
WP_014254773.1\|1747942_1748500_+	hypothetical protein	NA	NA	NA	NA
WP_014253714.1\|1748688_1749042_+\|transposase	transposase	NA	NA	NA	NA
WP_014254774.1\|1749038_1749392_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	3.5e-14	39.8
WP_014254775.1\|1751063_1751348_+	hypothetical protein	NA	NA	NA	NA
WP_148263821.1\|1752711_1753350_+	hypothetical protein	NA	NA	NA	NA
WP_014254777.1\|1753369_1753663_+	hypothetical protein	NA	NA	NA	NA
WP_014254778.1\|1753815_1754283_+	macro domain-containing protein	A0A2L1IVW3	Streptomyces_phage	1.0e-29	44.2
WP_041714999.1\|1754371_1754641_+	hypothetical protein	NA	NA	NA	NA
WP_014254780.1\|1754777_1755089_+	hypothetical protein	NA	NA	NA	NA
WP_052306582.1\|1755694_1759801_+	RHS repeat-associated core domain-containing protein	NA	NA	NA	NA
WP_014254781.1\|1759821_1760211_+	hypothetical protein	NA	NA	NA	NA
WP_014254782.1\|1760400_1760754_+\|transposase	transposase	NA	NA	NA	NA
WP_014254783.1\|1760750_1761104_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	3.5e-14	39.8
WP_014253716.1\|1762770_1763055_+	hypothetical protein	NA	NA	NA	NA
WP_041715001.1\|1763170_1763422_+	hypothetical protein	NA	NA	NA	NA
WP_014254785.1\|1764454_1765084_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_014254786.1\|1767094_1767289_+	hypothetical protein	NA	NA	NA	NA
WP_014254787.1\|1767293_1767749_+	hypothetical protein	NA	NA	NA	NA
WP_014254788.1\|1768330_1768528_+	hypothetical protein	NA	NA	NA	NA
WP_014254789.1\|1768942_1769959_+	DUF4236 domain-containing protein	A0A2K9V2W7	Faecalibacterium_phage	3.8e-13	53.6
WP_117405975.1\|1770594_1771992_-\|transposase	transposase	NA	NA	NA	NA
WP_014254790.1\|1772413_1777759_+	endo-1,4-beta-xylanase	NA	NA	NA	NA
WP_014253716.1\|1778213_1778498_-	hypothetical protein	NA	NA	NA	NA
WP_014253715.1\|1780168_1780522_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.0e-14	39.8
WP_014253714.1\|1780518_1780872_-\|transposase	transposase	NA	NA	NA	NA
WP_014254791.1\|1781018_1783049_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-20	29.7
WP_117406016.1\|1783188_1784739_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-09	57.1
WP_014254793.1\|1784818_1785169_-	CHASE3 domain-containing protein	NA	NA	NA	NA
WP_144687113.1\|1786475_1786775_+	hypothetical protein	NA	NA	NA	NA
WP_014254795.1\|1786811_1787315_+	N-acetyltransferase	NA	NA	NA	NA
WP_014254796.1\|1787416_1787920_+	flavin reductase family protein	NA	NA	NA	NA
WP_014254797.1\|1788121_1789864_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_041715004.1\|1789897_1790911_+	hypothetical protein	NA	NA	NA	NA
WP_148263776.1\|1790855_1791233_+	hypothetical protein	NA	NA	NA	NA
WP_014254798.1\|1791363_1792209_-	hypothetical protein	NA	NA	NA	NA
WP_014254799.1\|1792742_1793513_+\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	A0A291ATS8	Pandoravirus	2.5e-25	38.0
WP_014254800.1\|1793748_1794543_-	hypothetical protein	NA	NA	NA	NA
WP_014254801.1\|1794536_1795235_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.6e-16	24.9
WP_014254802.1\|1795231_1795606_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_014254803.1\|1796723_1798436_+	DUF1538 domain-containing protein	NA	NA	NA	NA
WP_014254804.1\|1798428_1798743_+	hypothetical protein	NA	NA	NA	NA
WP_081467091.1\|1798760_1799102_+	P-II family nitrogen regulator	NA	NA	NA	NA
WP_117405981.1\|1799728_1802323_+	PKD domain-containing protein	NA	NA	NA	NA
WP_014254807.1\|1802524_1804282_-	transglycosylase SLT domain-containing protein	A0A1P8CWQ1	Bacillus_phage	1.2e-17	37.9
WP_014254808.1\|1804979_1807853_+	glycoside hydrolase family 9 protein	NA	NA	NA	NA
WP_014254809.1\|1807865_1809998_+	glycoside hydrolase family 9 protein	NA	NA	NA	NA
WP_014254810.1\|1810377_1810893_+	ECF transporter S component	NA	NA	NA	NA
WP_014254811.1\|1811085_1811337_+	CopG family transcriptional regulator	NA	NA	NA	NA
WP_014254812.1\|1811657_1813022_+	[FeFe] hydrogenase H-cluster radical SAM maturase HydG	NA	NA	NA	NA
WP_014254024.1\|1813217_1814507_-\|transposase	IS110 family transposase	A0A0U3ULR1	Bacillus_phage	2.4e-36	29.1

DBSCAN-SWA_5

1849876 : 1895689

Leptospira_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041715572.1\|1849876_1851457_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_014254837.1\|1851453_1852230_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.2e-32	34.4
WP_052306584.1\|1853124_1853430_+	hypothetical protein	NA	NA	NA	NA
WP_014254838.1\|1853431_1853884_+	hypothetical protein	NA	NA	NA	NA
WP_014254835.1\|1853913_1854288_+	hypothetical protein	NA	NA	NA	NA
WP_014254839.1\|1854624_1854978_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_014254840.1\|1854974_1855328_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	5.9e-14	42.9
WP_014254843.1\|1857432_1858038_+	hypothetical protein	NA	NA	NA	NA
WP_014254844.1\|1858037_1858763_+	hypothetical protein	NA	NA	NA	NA
WP_014254845.1\|1858778_1859246_+	hypothetical protein	NA	NA	NA	NA
WP_014254846.1\|1859402_1859762_+	hypothetical protein	NA	NA	NA	NA
WP_014254847.1\|1861674_1862304_+	hypothetical protein	NA	NA	NA	NA
WP_144687037.1\|1862674_1863271_+	hypothetical protein	NA	NA	NA	NA
WP_014254849.1\|1863273_1864248_+	hypothetical protein	NA	NA	NA	NA
WP_014254544.1\|1864859_1866077_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.7e-55	54.3
WP_014253716.1\|1866219_1866504_-	hypothetical protein	NA	NA	NA	NA
WP_014254783.1\|1868173_1868527_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	3.5e-14	39.8
WP_014253714.1\|1868523_1868877_-\|transposase	transposase	NA	NA	NA	NA
WP_014254851.1\|1870188_1870704_+	hypothetical protein	NA	NA	NA	NA
WP_027622199.1\|1871076_1872228_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	5.6e-21	30.1
WP_014253901.1\|1872542_1873613_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.0e-56	37.6
WP_014254852.1\|1874974_1875346_+	hypothetical protein	NA	NA	NA	NA
WP_014254853.1\|1875511_1876489_+	hypothetical protein	NA	NA	NA	NA
WP_051411155.1\|1877559_1877901_+	hypothetical protein	NA	NA	NA	NA
WP_014254854.1\|1877925_1878363_+	hypothetical protein	NA	NA	NA	NA
WP_027621416.1\|1879270_1879456_+	hypothetical protein	NA	NA	NA	NA
WP_014254857.1\|1879472_1879961_+	hypothetical protein	NA	NA	NA	NA
WP_014254859.1\|1881492_1882122_+	hypothetical protein	NA	NA	NA	NA
WP_014253714.1\|1882825_1883179_+\|transposase	transposase	NA	NA	NA	NA
WP_014253715.1\|1883175_1883529_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.0e-14	39.8
WP_014254860.1\|1885376_1886408_-\|transposase	IS6 family transposase	NA	NA	NA	NA
WP_014253716.1\|1886530_1886815_+	hypothetical protein	NA	NA	NA	NA
WP_014254861.1\|1887039_1887843_+	hypothetical protein	NA	NA	NA	NA
WP_014254862.1\|1887842_1888568_+	hypothetical protein	NA	NA	NA	NA
WP_014254845.1\|1888583_1889051_+	hypothetical protein	NA	NA	NA	NA
WP_014254863.1\|1889207_1889567_+	hypothetical protein	NA	NA	NA	NA
WP_014254864.1\|1889964_1891707_+	hypothetical protein	NA	NA	NA	NA
WP_014254838.1\|1891708_1892161_+	hypothetical protein	NA	NA	NA	NA
WP_014254835.1\|1892190_1892565_+	hypothetical protein	NA	NA	NA	NA
WP_081467093.1\|1894237_1895689_+\|transposase	IS21 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

2615585 : 2662438

uncultured_virus(22.22%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014255444.1\|2615585_2616518_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_041715682.1\|2616582_2617155_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_014255446.1\|2617165_2617837_-	DUF2085 domain-containing protein	NA	NA	NA	NA
WP_014255447.1\|2617841_2618552_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_014255448.1\|2618853_2619162_-	50S ribosomal protein L25	NA	NA	NA	NA
WP_014255449.1\|2619234_2619540_-	hypothetical protein	NA	NA	NA	NA
WP_014255450.1\|2619860_2620823_+	hypothetical protein	NA	NA	NA	NA
WP_014255451.1\|2620947_2621394_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_014255452.1\|2621744_2622992_+	nucleotidyltransferase	NA	NA	NA	NA
WP_014255453.1\|2623164_2624832_-	ribonuclease J	NA	NA	NA	NA
WP_014255454.1\|2625481_2626705_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_014255455.1\|2627046_2628423_-	PhoH family protein	A0A141HS37	Bacillus_phage	3.9e-114	46.4
WP_014255456.1\|2628845_2629193_-	cupin domain-containing protein	NA	NA	NA	NA
WP_014255457.1\|2629488_2629896_+	hypothetical protein	NA	NA	NA	NA
WP_014255458.1\|2630185_2631064_-	nitrogenase iron protein	NA	NA	NA	NA
WP_014255459.1\|2631359_2633159_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_014255460.1\|2633212_2634133_-	S-layer homology domain-containing protein	NA	NA	NA	NA
WP_014255461.1\|2634291_2634873_-	flavodoxin family protein	NA	NA	NA	NA
WP_014255462.1\|2634876_2637210_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	3.1e-119	35.8
WP_014255463.1\|2637225_2638107_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.5e-39	39.6
WP_041715102.1\|2638179_2639244_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014255465.1\|2639308_2640169_-	ABC transporter permease	NA	NA	NA	NA
WP_014255466.1\|2640152_2640938_-	ABC transporter permease	NA	NA	NA	NA
WP_014255467.1\|2640968_2642480_-	nitrogenase	NA	NA	NA	NA
WP_014255468.1\|2642491_2643832_-	nitrogenase molybdenum-iron protein subunit alpha/beta	NA	NA	NA	NA
WP_014255469.1\|2643874_2644954_-	uroporphyrinogen decarboxylase family protein	NA	NA	NA	NA
WP_014255470.1\|2645237_2645909_-	corrinoid protein	NA	NA	NA	NA
WP_014255471.1\|2645951_2646887_-	cysteine synthase A	A0A1X9I5F1	Streptococcus_phage	7.6e-85	55.5
WP_014255472.1\|2647025_2647592_-	nitroreductase family protein	NA	NA	NA	NA
WP_014255473.1\|2647623_2649336_-	nitrogenase cofactor biosynthesis protein NifB	NA	NA	NA	NA
WP_144687023.1\|2649709_2650423_-	hypothetical protein	NA	NA	NA	NA
WP_014255475.1\|2650896_2651694_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_014255476.1\|2651714_2651984_+	DUF2325 domain-containing protein	NA	NA	NA	NA
WP_014255477.1\|2652269_2653487_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.7e-55	54.3
WP_014254763.1\|2653624_2653909_-	hypothetical protein	NA	NA	NA	NA
WP_014255478.1\|2653905_2655510_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	3.3e-72	37.5
WP_081467038.1\|2655573_2655870_-	hypothetical protein	NA	NA	NA	NA
WP_014253722.1\|2656062_2656833_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	7.0e-52	42.0
WP_081467039.1\|2656849_2658301_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_014255480.1\|2658418_2658655_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	3.1e-11	44.9
WP_014255481.1\|2658651_2659005_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_014255482.1\|2659320_2659803_-	hypothetical protein	NA	NA	NA	NA
WP_014255483.1\|2659820_2660036_-	hypothetical protein	NA	NA	NA	NA
WP_148263832.1\|2660392_2661589_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_014253709.1\|2661982_2662438_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	1.5e-17	37.6

DBSCAN-SWA_7

2670530 : 2714359

Leptospira_phage(62.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014255491.1\|2670530_2672135_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	4.4e-72	37.2
WP_014255492.1\|2672199_2672553_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	5.9e-14	39.8
WP_014255493.1\|2672549_2672903_-\|transposase	transposase	NA	NA	NA	NA
WP_014255494.1\|2672972_2673128_-	hypothetical protein	NA	NA	NA	NA
WP_014255495.1\|2673375_2673762_-	hypothetical protein	NA	NA	NA	NA
WP_041715113.1\|2673802_2676211_-	hypothetical protein	NA	NA	NA	NA
WP_081467041.1\|2676490_2676613_-	RHS repeat protein	NA	NA	NA	NA
WP_041715115.1\|2676613_2679298_-	RHS repeat protein	NA	NA	NA	NA
WP_014255496.1\|2679413_2679575_-	hypothetical protein	NA	NA	NA	NA
WP_014254765.1\|2681362_2681716_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	5.9e-14	39.8
WP_014255499.1\|2682203_2682599_-	hypothetical protein	NA	NA	NA	NA
WP_081467095.1\|2684667_2684811_-	hypothetical protein	NA	NA	NA	NA
WP_148263833.1\|2684776_2684905_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_041715117.1\|2685069_2685789_-	suppressor of fused domain protein	NA	NA	NA	NA
WP_014255503.1\|2687486_2687975_-	hypothetical protein	NA	NA	NA	NA
WP_169313365.1\|2688264_2688441_-	hypothetical protein	NA	NA	NA	NA
WP_014255505.1\|2688516_2690124_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	7.0e-70	36.8
WP_014253715.1\|2690188_2690542_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.0e-14	39.8
WP_014254782.1\|2690538_2690892_-\|transposase	transposase	NA	NA	NA	NA
WP_014255506.1\|2691261_2691603_-	hypothetical protein	NA	NA	NA	NA
WP_014255507.1\|2691613_2693710_-	type IV secretion protein Rhs	NA	NA	NA	NA
WP_014255508.1\|2693826_2701137_-	Ig-like domain-containing protein	A0A140XG62	Salmonella_phage	4.8e-25	29.5
WP_014255510.1\|2701817_2702234_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_081467043.1\|2702323_2702695_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_027621322.1\|2704049_2704490_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_085951483.1\|2705238_2706762_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_014255512.1\|2707360_2708869_-	zf-HC2 domain-containing protein	NA	NA	NA	NA
WP_014255513.1\|2708882_2709407_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_014255514.1\|2709538_2710069_-	S-layer homology domain-containing protein	NA	NA	NA	NA
WP_041715121.1\|2710128_2711028_-	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	NA	NA	NA	NA
WP_169313381.1\|2711196_2711721_-	S8 family serine peptidase	NA	NA	NA	NA
WP_157834826.1\|2711732_2711999_+	amidase domain-containing protein	NA	NA	NA	NA
WP_014254989.1\|2712033_2712792_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	1.4e-44	38.7
WP_144687005.1\|2712769_2714359_-\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	2.3e-12	24.5

DBSCAN-SWA_8

3029555 : 3130833

Acinetobacter_phage(17.65%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014254024.1\|3029555_3030845_+\|transposase	IS110 family transposase	A0A0U3ULR1	Bacillus_phage	2.4e-36	29.1
WP_014255750.1\|3031265_3031505_-	hypothetical protein	NA	NA	NA	NA
WP_148263787.1\|3031931_3032111_-	hypothetical protein	NA	NA	NA	NA
WP_014255751.1\|3032260_3033574_-	DUF4367 domain-containing protein	NA	NA	NA	NA
WP_014255752.1\|3033551_3034139_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_014255753.1\|3034485_3035130_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_014255754.1\|3035126_3035921_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	3.8e-45	39.6
WP_014255755.1\|3035991_3037020_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	3.0e-82	46.3
WP_014255756.1\|3037091_3037676_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	9.4e-49	49.2
WP_014255757.1\|3037672_3039157_-	anthranilate synthase component I	NA	NA	NA	NA
WP_014255758.1\|3039547_3041008_+	DEAD/DEAH box helicase	A0A0N9Q9J4	Chrysochromulina_ericina_virus	5.0e-59	34.9
WP_014253858.1\|3041137_3042199_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	1.3e-93	52.5
WP_014255759.1\|3042347_3043643_+	glycosyltransferase family 39 protein	NA	NA	NA	NA
WP_014255760.1\|3043963_3045058_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_014255761.1\|3045205_3045658_-	purine-binding chemotaxis protein CheW	NA	NA	NA	NA
WP_014255762.1\|3046263_3047277_+	3-deoxy-7-phosphoheptulonate synthase	NA	NA	NA	NA
WP_014255763.1\|3047406_3049140_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_014255764.1\|3049317_3051546_-	glycoside hydrolase family 95 protein	NA	NA	NA	NA
WP_014255765.1\|3051732_3053055_-	alpha-glucosidase/alpha-galactosidase	NA	NA	NA	NA
WP_014255766.1\|3053466_3054597_-	diguanylate cyclase	NA	NA	NA	NA
WP_014255767.1\|3054852_3055755_-	DMT family transporter	NA	NA	NA	NA
WP_014255768.1\|3055974_3056388_+	flagellar protein	NA	NA	NA	NA
WP_014255769.1\|3056514_3057093_-	lytic transglycosylase domain-containing protein	A0A0H3V0Q1	Geobacillus_virus	8.7e-15	39.5
WP_014255770.1\|3057193_3057781_-	dephospho-CoA kinase	NA	NA	NA	NA
WP_014255771.1\|3057909_3060600_-	DNA polymerase I	D9ZNH3	Clostridium_phage	3.8e-60	31.1
WP_014255772.1\|3060653_3060821_-	hypothetical protein	NA	NA	NA	NA
WP_014255773.1\|3061028_3062237_-	zf-HC2 domain-containing protein	NA	NA	NA	NA
WP_014254024.1\|3062652_3063942_+\|transposase	IS110 family transposase	A0A0U3ULR1	Bacillus_phage	2.4e-36	29.1
WP_014255774.1\|3064121_3064721_-	sigma-70 family RNA polymerase sigma factor	A0A0F6TH34	Sinorhizobium_phage	2.0e-06	26.3
WP_014255775.1\|3065194_3065851_-	YdcF family protein	NA	NA	NA	NA
WP_014255776.1\|3065860_3066769_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA
WP_014255777.1\|3066890_3070463_-	chromosome segregation protein SMC	NA	NA	NA	NA
WP_014255778.1\|3070629_3071628_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_014255779.1\|3071818_3072949_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_014255780.1\|3072945_3073623_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.6e-38	41.8
WP_014255781.1\|3073660_3076138_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_014255782.1\|3076194_3077457_-	MFS transporter	A0A2K5B2B5	Erysipelothrix_phage	1.5e-11	22.2
WP_014255783.1\|3077558_3081032_-	thioester reductase domain-containing protein	NA	NA	NA	NA
WP_014255784.1\|3081081_3088779_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	4.7e-140	24.4
WP_014255785.1\|3088808_3094031_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_052306596.1\|3094045_3097939_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_041715163.1\|3098050_3099748_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_014255788.1\|3099798_3108306_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_014255789.1\|3108374_3109655_-	ACP S-malonyltransferase	NA	NA	NA	NA
WP_014255790.1\|3109672_3112222_-	non-ribosomal peptide synthetase	A0A1V0SBX8	Catovirus	1.0e-22	25.3
WP_014255791.1\|3112486_3112666_-	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_014255792.1\|3113471_3114257_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_014255488.1\|3116374_3117151_-	hypothetical protein	NA	NA	NA	NA
WP_014255794.1\|3118361_3118646_-	TIGR04540 family protein	NA	NA	NA	NA
WP_014255796.1\|3120985_3121576_-	hypothetical protein	NA	NA	NA	NA
WP_014255797.1\|3122069_3122294_+	hypothetical protein	NA	NA	NA	NA
WP_014255798.1\|3124440_3124872_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_014253709.1\|3125168_3125624_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	1.5e-17	37.6
WP_014255799.1\|3125859_3126060_-	hypothetical protein	NA	NA	NA	NA
WP_014255800.1\|3127224_3127578_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	7.7e-14	39.8
WP_014255801.1\|3127574_3127928_-\|transposase	transposase	NA	NA	NA	NA
WP_014255802.1\|3128188_3128701_-	hypothetical protein	NA	NA	NA	NA
WP_014254763.1\|3128947_3129232_-	hypothetical protein	NA	NA	NA	NA
WP_014255803.1\|3129228_3130833_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	2.0e-72	37.4

DBSCAN-SWA_9

3405725 : 3460820

Clostridioides_phage(16.67%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014256025.1\|3405725_3407756_-\|protease	protease Lon-related BREX system protein BrxL	NA	NA	NA	NA
WP_014256026.1\|3407768_3410327_-	BREX-1 system phosphatase PglZ type A	NA	NA	NA	NA
WP_014256027.1\|3410382_3411543_-	putative DNA binding domain-containing protein	NA	NA	NA	NA
WP_014256028.1\|3411560_3415223_-	BREX-1 system adenine-specific DNA-methyltransferase PglX	A0A2R2ZGH5	Clostridioides_phage	2.9e-10	22.0
WP_014256029.1\|3415235_3418796_-	BREX system P-loop protein BrxC	NA	NA	NA	NA
WP_014256030.1\|3418832_3419417_-	DUF1788 domain-containing protein	NA	NA	NA	NA
WP_014256031.1\|3419417_3420023_-	DUF1819 family protein	NA	NA	NA	NA
WP_014256032.1\|3420153_3421020_-	HNH endonuclease	NA	NA	NA	NA
WP_014256033.1\|3421757_3422405_-	LysE family transporter	NA	NA	NA	NA
WP_014256034.1\|3422657_3423989_-	serine hydroxymethyltransferase	Q8JKP0	Heliothis_zea_nudivirus	7.3e-81	43.4
WP_014256035.1\|3424356_3424989_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_014256036.1\|3425448_3426030_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_014256037.1\|3426151_3427324_-	cation:proton antiporter	NA	NA	NA	NA
WP_014256038.1\|3427578_3429771_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA
WP_014256039.1\|3429796_3434074_-	S-layer homology domain-containing protein	NA	NA	NA	NA
WP_041715189.1\|3436234_3437317_-	ATP-binding protein	NA	NA	NA	NA
WP_027621809.1\|3437406_3438918_-	hypothetical protein	NA	NA	NA	NA
WP_052306601.1\|3439037_3440858_-	TniQ family protein	NA	NA	NA	NA
WP_014256043.1\|3444684_3445530_-\|transposase	heteromeric transposase endonuclease subunit TnsA	NA	NA	NA	NA
WP_014256045.1\|3446094_3446964_-	hypothetical protein	NA	NA	NA	NA
WP_014256046.1\|3446960_3447755_-	hypothetical protein	NA	NA	NA	NA
WP_014256047.1\|3447768_3448143_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014256048.1\|3450436_3451213_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.6e-32	34.4
WP_014254024.1\|3451797_3453087_+\|transposase	IS110 family transposase	A0A0U3ULR1	Bacillus_phage	2.4e-36	29.1
WP_041715191.1\|3453328_3454456_-	radical SAM protein	NA	NA	NA	NA
WP_117405975.1\|3454650_3456048_+\|transposase	transposase	NA	NA	NA	NA
WP_041715193.1\|3456024_3456258_-	hypothetical protein	NA	NA	NA	NA
WP_174269802.1\|3456693_3457905_-\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	2.1e-95	48.2
WP_014254544.1\|3459602_3460820_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.7e-55	54.3

DBSCAN-SWA_10

3527849 : 3604172

uncultured_virus(17.65%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014256103.1\|3527849_3528149_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	4.7e-12	44.0
WP_014256104.1\|3528416_3530681_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.1e-153	39.6
WP_014256105.1\|3530688_3531360_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_014256106.1\|3531360_3532461_+	DUF3810 domain-containing protein	NA	NA	NA	NA
WP_014256107.1\|3532928_3533795_-	hypothetical protein	NA	NA	NA	NA
WP_014256108.1\|3534033_3534582_-	hypothetical protein	NA	NA	NA	NA
WP_014256109.1\|3535110_3543876_-	glycosyl transferase	NA	NA	NA	NA
WP_014256110.1\|3544171_3546667_-	glycoside hydrolase family 9 protein	NA	NA	NA	NA
WP_014256111.1\|3546974_3547778_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_014256112.1\|3547894_3548248_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_014256113.1\|3548265_3548466_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_014256114.1\|3548499_3549021_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	3.2e-16	33.9
WP_014253858.1\|3549302_3550364_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	1.3e-93	52.5
WP_014256115.1\|3550476_3551112_-	FAD-dependent thymidylate synthase	A0A2K9V392	Faecalibacterium_phage	2.0e-52	50.7
WP_041715764.1\|3551259_3553167_-\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	1.3e-142	39.7
WP_014256117.1\|3553894_3555220_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_014256118.1\|3555404_3560030_+	glycoside hydrolase family 9 protein	G0YQI6	Erwinia_phage	4.0e-134	40.5
WP_014256119.1\|3560185_3562780_-	glycosyltransferase family 39 protein	NA	NA	NA	NA
WP_169313383.1\|3563194_3563350_+	hypothetical protein	NA	NA	NA	NA
WP_014256120.1\|3563456_3564209_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_014256121.1\|3566261_3567557_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
WP_014256122.1\|3569591_3570818_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	4.5e-53	53.7
WP_081467059.1\|3571908_3572199_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_052306604.1\|3574416_3574896_+	hypothetical protein	NA	NA	NA	NA
WP_014256125.1\|3575044_3575500_+	hypothetical protein	NA	NA	NA	NA
WP_014256126.1\|3575522_3576461_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.9e-15	28.1
WP_014256128.1\|3577522_3578740_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	4.1e-54	52.7
WP_014256129.1\|3579094_3579430_-	ribosome silencing factor	NA	NA	NA	NA
WP_014256130.1\|3579472_3580057_-	LytR C-terminal domain-containing protein	NA	NA	NA	NA
WP_027621859.1\|3580133_3580715_-	HD domain-containing protein	NA	NA	NA	NA
WP_014256132.1\|3580739_3581360_-	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA
WP_014256133.1\|3581367_3582330_-	ROK family protein	NA	NA	NA	NA
WP_027621861.1\|3582484_3584203_-	family 43 glycosylhydrolase	NA	NA	NA	NA
WP_014256135.1\|3584667_3586371_-	GH3 auxin-responsive promoter family protein	NA	NA	NA	NA
WP_027621863.1\|3586615_3587053_+	hypothetical protein	NA	NA	NA	NA
WP_027621864.1\|3587012_3588047_+	hypothetical protein	NA	NA	NA	NA
WP_014256136.1\|3588398_3589391_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_014256137.1\|3589459_3589963_-	hypothetical protein	NA	NA	NA	NA
WP_014256138.1\|3590262_3590775_-	hypothetical protein	NA	NA	NA	NA
WP_014256139.1\|3590895_3591723_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014256140.1\|3592648_3593908_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_014256141.1\|3593924_3595469_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	2.9e-73	49.5
WP_014256142.1\|3595505_3596132_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.4e-20	37.6
WP_014256143.1\|3596125_3597148_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	8.6e-74	47.5
WP_014256144.1\|3597197_3598664_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.2e-61	34.2
WP_014256145.1\|3598677_3599193_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.2e-27	50.7
WP_014256146.1\|3599303_3600695_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	8.0e-38	28.6
WP_014256147.1\|3600906_3601902_-	AEC family transporter	NA	NA	NA	NA
WP_014256148.1\|3602429_3603449_-	hypothetical protein	NA	NA	NA	NA
WP_014253709.1\|3603716_3604172_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	1.5e-17	37.6

DBSCAN-SWA_11

3661718 : 3723621

Bacillus_phage(18.18%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014256197.1\|3661718_3664082_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	4.4e-121	40.9
WP_014256198.1\|3664551_3667383_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	59.7
WP_014256199.1\|3667481_3669464_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA
WP_014256200.1\|3669696_3670776_-	PD40 domain-containing protein	NA	NA	NA	NA
WP_014256201.1\|3671028_3674490_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_027621893.1\|3674622_3675816_+	dockerin	NA	NA	NA	NA
WP_014256203.1\|3676093_3676618_-	hypothetical protein	NA	NA	NA	NA
WP_014256204.1\|3676755_3677208_-	hypothetical protein	NA	NA	NA	NA
WP_014256205.1\|3677255_3678746_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	8.5e-30	31.9
WP_014256206.1\|3678735_3679431_-	response regulator transcription factor	W8CYM9	Bacillus_phage	4.0e-38	38.3
WP_014256207.1\|3679754_3680201_+	hypothetical protein	NA	NA	NA	NA
WP_117405995.1\|3680201_3681047_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_027621894.1\|3681185_3682022_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_014256210.1\|3682027_3683311_-	AAA family ATPase	R4TQL5	Phaeocystis_globosa_virus	4.0e-36	35.7
WP_014256211.1\|3683356_3683701_-	hypothetical protein	NA	NA	NA	NA
WP_014256212.1\|3683939_3684395_-	SUKH-3 domain-containing protein	NA	NA	NA	NA
WP_051411199.1\|3684473_3684737_-	hypothetical protein	NA	NA	NA	NA
WP_014256213.1\|3685162_3685774_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_014256214.1\|3686300_3686732_-	immunity 70 family protein	A0A2H4J4V0	uncultured_Caudovirales_phage	3.3e-19	38.1
WP_041715212.1\|3687471_3687669_-\|transposase	transposase	NA	NA	NA	NA
WP_014256216.1\|3688972_3689947_-	hypothetical protein	NA	NA	NA	NA
WP_014256217.1\|3689930_3690995_-	hypothetical protein	NA	NA	NA	NA
WP_014256218.1\|3691007_3692318_-	B12-binding domain-containing radical SAM protein	NA	NA	NA	NA
WP_014256219.1\|3692401_3693682_-	B12-binding domain-containing radical SAM protein	NA	NA	NA	NA
WP_014256220.1\|3693782_3695009_-	Reverse transcriptase (RNA-dependent DNA polymerase)	NA	NA	NA	NA
WP_014256221.1\|3695301_3696660_-	B12-binding domain-containing radical SAM protein	NA	NA	NA	NA
WP_014256222.1\|3696970_3698299_-	B12-binding domain-containing radical SAM protein	NA	NA	NA	NA
WP_014256223.1\|3698721_3703155_-	chromosome segregation ATPase	NA	NA	NA	NA
WP_014256224.1\|3703195_3703909_-	hypothetical protein	NA	NA	NA	NA
WP_014256225.1\|3703908_3705483_-	hypothetical protein	NA	NA	NA	NA
WP_014256226.1\|3705460_3706507_-	hypothetical protein	NA	NA	NA	NA
WP_014256228.1\|3706969_3708214_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.5e-35	31.3
WP_014256229.1\|3710364_3711093_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	5.3e-33	40.2
WP_014253714.1\|3711319_3711673_+\|transposase	transposase	NA	NA	NA	NA
WP_014253715.1\|3711669_3712023_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.0e-14	39.8
WP_014256230.1\|3713693_3713978_+	hypothetical protein	NA	NA	NA	NA
WP_041715214.1\|3715179_3717825_-	peptidoglycan-binding protein	NA	NA	NA	NA
WP_014253716.1\|3717987_3718272_-	hypothetical protein	NA	NA	NA	NA
WP_014254860.1\|3718394_3719426_+\|transposase	IS6 family transposase	NA	NA	NA	NA
WP_014253715.1\|3721238_3721592_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.0e-14	39.8
WP_014254782.1\|3721588_3721942_-\|transposase	transposase	NA	NA	NA	NA
WP_014256234.1\|3722403_3723621_-\|transposase	IS256-like element ISCcl1 family transposase	A0A218MNI5	uncultured_virus	6.5e-52	50.8

DBSCAN-SWA_12

4080413 : 4146923

uncultured_Caudovirales_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_081467108.1\|4080413_4080689_+\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_052306613.1\|4080667_4081387_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_014256479.1\|4081414_4081651_+	hypothetical protein	NA	NA	NA	NA
WP_014256480.1\|4081926_4084527_-	hypothetical protein	NA	NA	NA	NA
WP_014256481.1\|4084523_4085294_-	copper amine oxidase N-terminal domain-containing protein	NA	NA	NA	NA
WP_014256482.1\|4087387_4088146_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	6.2e-45	40.1
WP_014256483.1\|4088145_4089633_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_014256484.1\|4089977_4090427_-	SUKH-3 domain-containing protein	NA	NA	NA	NA
WP_014256485.1\|4090439_4092053_-	hypothetical protein	NA	NA	NA	NA
WP_051411222.1\|4092339_4092678_-	SUKH-3 domain-containing protein	NA	NA	NA	NA
WP_051411223.1\|4092710_4093049_-	hypothetical protein	NA	NA	NA	NA
WP_014256486.1\|4093126_4093717_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_014256487.1\|4093738_4094812_-	hypothetical protein	NA	NA	NA	NA
WP_014256488.1\|4095032_4095494_-	hypothetical protein	NA	NA	NA	NA
WP_169313386.1\|4095526_4098133_-	hypothetical protein	NA	NA	NA	NA
WP_014256490.1\|4098048_4099575_-	transglutaminase domain-containing protein	NA	NA	NA	NA
WP_052306614.1\|4099564_4102540_-	S-layer homology domain-containing protein	NA	NA	NA	NA
WP_027622022.1\|4102543_4104148_-	terpene cyclase/mutase family protein	NA	NA	NA	NA
WP_081467070.1\|4104506_4104668_-	magnesium transporter	NA	NA	NA	NA
WP_014256491.1\|4105993_4106170_-	hypothetical protein	NA	NA	NA	NA
WP_117406030.1\|4106221_4106989_-	hypothetical protein	NA	NA	NA	NA
WP_041715243.1\|4107303_4107741_-	hypothetical protein	NA	NA	NA	NA
WP_014256494.1\|4108420_4109728_-	hypothetical protein	NA	NA	NA	NA
WP_014256495.1\|4109871_4111206_-	magnesium transporter	NA	NA	NA	NA
WP_027622026.1\|4111907_4112771_-	hypothetical protein	NA	NA	NA	NA
WP_014256498.1\|4112902_4114975_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	9.8e-08	43.4
WP_014256499.1\|4115395_4116151_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_014256500.1\|4116265_4117144_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_014256501.1\|4117209_4117959_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_014256502.1\|4117975_4118713_-	DUF3784 domain-containing protein	NA	NA	NA	NA
WP_014256503.1\|4119208_4119772_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_014256504.1\|4119954_4120557_+	DUF308 domain-containing protein	NA	NA	NA	NA
WP_014256505.1\|4120559_4122665_+	MMPL family transporter	NA	NA	NA	NA
WP_014256506.1\|4122654_4124949_+	membrane protein	NA	NA	NA	NA
WP_014256507.1\|4125113_4125650_-	dCTP deaminase	Q8V6P6	Halorubrum_phage	2.1e-26	44.2
WP_014256508.1\|4125890_4126268_-	SdpI family protein	NA	NA	NA	NA
WP_014256509.1\|4126410_4127079_-	C39 family peptidase	NA	NA	NA	NA
WP_014256510.1\|4127181_4127673_-	hypothetical protein	NA	NA	NA	NA
WP_027622029.1\|4127686_4128274_-	hypothetical protein	NA	NA	NA	NA
WP_027622030.1\|4128307_4129159_-	serine hydrolase	G1BNF7	Mycobacterium_phage	1.9e-13	29.2
WP_014256511.1\|4129162_4129993_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_014256512.1\|4131078_4131870_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_014256513.1\|4131918_4133046_-	MGT family glycosyltransferase	Q7T5G5	Cryptophlebia_leucotreta_granulosis_virus	1.9e-13	26.4
WP_014256514.1\|4133271_4133616_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_014256515.1\|4133973_4135524_-\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_081467071.1\|4135643_4135937_-	YjdF family protein	NA	NA	NA	NA
WP_014256516.1\|4136243_4136900_-	flavodoxin family protein	NA	NA	NA	NA
WP_014256517.1\|4137085_4139044_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.0e-06	21.5
WP_014253712.1\|4140160_4141231_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	4.2e-55	37.3
WP_014256519.1\|4142846_4145213_-	antirepressor regulating drug resistance protein	NA	NA	NA	NA
WP_014254024.1\|4145633_4146923_+\|transposase	IS110 family transposase	A0A0U3ULR1	Bacillus_phage	2.4e-36	29.1

DBSCAN-SWA_13

4244080 : 4306743

Erysipelothrix_phage(51.85%)

tail,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014256615.1\|4244080_4245553_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	5.3e-16	26.5
WP_014256616.1\|4245716_4246808_-	hypothetical protein	NA	NA	NA	NA
WP_014256617.1\|4246870_4250068_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	4.9e-75	27.4
WP_014256618.1\|4250097_4251333_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_014256619.1\|4251329_4252358_-	virulence RhuM family protein	Q9JMN3	Wolbachia_phage	1.1e-79	50.8
WP_014256620.1\|4252347_4253850_-	SAM-dependent DNA methyltransferase	A0A220A2U5	Liberibacter_phage	1.3e-46	31.5
WP_014256621.1\|4253869_4254370_-	hypothetical protein	NA	NA	NA	NA
WP_014256622.1\|4254383_4255967_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_014256624.1\|4257565_4258627_-	HAMP domain-containing histidine kinase	A0A1X9VNV7	Mimivirus	3.6e-06	24.4
WP_014256625.1\|4258673_4259372_-	VanR-ABDEGLN family response regulator transcription factor	W8CYM9	Bacillus_phage	4.9e-44	41.0
WP_014256626.1\|4259390_4259633_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_014256627.1\|4259937_4260486_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014256628.1\|4260503_4261121_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_041715263.1\|4261252_4261405_-	hypothetical protein	NA	NA	NA	NA
WP_081467073.1\|4261558_4262044_-	DNA recombinase	A0A2K5B2B4	Erysipelothrix_phage	7.9e-09	29.6
WP_014256629.1\|4262338_4263025_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	7.0e-11	25.0
WP_014256630.1\|4263017_4264490_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	3.1e-16	26.2
WP_014256631.1\|4264781_4268030_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_014256632.1\|4268029_4270933_-	site-specific DNA-methyltransferase	A0A2K5B2C1	Erysipelothrix_phage	3.1e-20	30.4
WP_014256633.1\|4270948_4273792_-	DEAD/DEAH box helicase family protein	A0A2H4J643	uncultured_Caudovirales_phage	1.2e-218	45.7
WP_014256634.1\|4273819_4274029_-	helix-turn-helix transcriptional regulator	A0A2K5B261	Erysipelothrix_phage	5.5e-20	70.6
WP_144686997.1\|4275772_4276000_-	hypothetical protein	NA	NA	NA	NA
WP_027622081.1\|4277427_4277652_-	hypothetical protein	NA	NA	NA	NA
WP_148263804.1\|4277838_4278777_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	4.0e-17	28.5
WP_014256636.1\|4278740_4279049_-\|transposase	transposase	NA	NA	NA	NA
WP_014256637.1\|4279506_4280805_-	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_144686997.1\|4280820_4281048_-	hypothetical protein	NA	NA	NA	NA
WP_014256637.1\|4281407_4282706_-	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_144686997.1\|4282721_4282949_-	hypothetical protein	NA	NA	NA	NA
WP_014256638.1\|4283404_4284328_-	hypothetical protein	NA	NA	NA	NA
WP_014256639.1\|4284324_4284810_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_014256641.1\|4287814_4288177_-	BlaI/MecI/CopY family transcriptional regulator	NA	NA	NA	NA
WP_014256642.1\|4288359_4289928_-	recombinase family protein	A0A2K5B2B4	Erysipelothrix_phage	2.2e-169	57.7
WP_014256643.1\|4289890_4290382_-	recombinase	A0A2K5B2B3	Erysipelothrix_phage	1.8e-21	42.3
WP_014256644.1\|4290345_4291914_-	recombinase family protein	A0A2K5B2B2	Erysipelothrix_phage	2.3e-150	52.5
WP_014256645.1\|4291975_4292194_-	hypothetical protein	NA	NA	NA	NA
WP_014256646.1\|4292247_4293252_-	N-acetylmuramoyl-L-alanine amidase	H7BV89	unidentified_phage	5.4e-12	71.4
WP_014256647.1\|4293248_4293668_-\|holin	phage holin family protein	A0A2K5B2A2	Erysipelothrix_phage	2.7e-50	68.4
WP_014256648.1\|4293754_4296223_-	glycosyl hydrolase	A0A2K5B2A1	Erysipelothrix_phage	0.0e+00	68.7
WP_014256649.1\|4296219_4296804_-	hypothetical protein	A0A2K5B2A0	Erysipelothrix_phage	1.9e-54	53.1
WP_023062528.1\|4296881_4297151_-	hypothetical protein	NA	NA	NA	NA
WP_003520677.1\|4297218_4297413_-	hypothetical protein	A0A2K5B299	Erysipelothrix_phage	2.2e-18	66.2
WP_014256652.1\|4300058_4300832_-\|tail	phage tail family protein	A0A2I4R672	Erysipelothrix_phage	1.1e-73	51.9
WP_014256653.1\|4300845_4303032_-	hypothetical protein	A0A2K5B297	Erysipelothrix_phage	1.8e-12	38.3
WP_014256654.1\|4303058_4303250_-	hypothetical protein	A0A2K5B296	Erysipelothrix_phage	1.9e-11	68.3
WP_014256655.1\|4303246_4303630_-	hypothetical protein	A0A2K5B295	Erysipelothrix_phage	3.7e-38	67.5
WP_014256656.1\|4304292_4304523_-	hypothetical protein	NA	NA	NA	NA
WP_014256657.1\|4304824_4305742_+	Abi family protein	A0A1Q1PVS3	Staphylococcus_phage	1.9e-11	27.4
WP_014256658.1\|4305893_4306349_-	hypothetical protein	NA	NA	NA	NA
WP_014256659.1\|4306440_4306743_-	VRR-NUC domain-containing protein	I3VYX6	Thermoanaerobacterium_phage	2.6e-26	65.2

DBSCAN-SWA_14

4318300 : 4366741

Erysipelothrix_phage(71.05%)

tail,transposase,head,terminase,capsid,protease,portal,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014256663.1\|4318300_4318552_+\|transposase	transposase	NA	NA	NA	NA
WP_052306636.1\|4318766_4319414_-	hypothetical protein	NA	NA	NA	NA
WP_014256665.1\|4319943_4320963_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_014254896.1\|4321434_4322733_-	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_144686997.1\|4322748_4322976_-	hypothetical protein	NA	NA	NA	NA
WP_003868548.1\|4323369_4323855_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_003868547.1\|4324012_4324477_-	signal peptidase II	NA	NA	NA	NA
WP_014256666.1\|4324563_4326924_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.8e-114	35.1
WP_014256667.1\|4326937_4327312_-	winged helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	5.1e-16	41.1
WP_014256668.1\|4327811_4329380_-	recombinase family protein	A0A2K5B2B4	Erysipelothrix_phage	1.4e-171	57.9
WP_014256669.1\|4329342_4329834_-	recombinase	A0A2K5B2B3	Erysipelothrix_phage	4.1e-21	41.6
WP_014256670.1\|4329797_4331366_-	recombinase family protein	A0A2K5B2B2	Erysipelothrix_phage	4.8e-148	51.5
WP_014256671.1\|4331427_4331646_-	hypothetical protein	NA	NA	NA	NA
WP_014256672.1\|4331699_4332704_-	N-acetylmuramoyl-L-alanine amidase	H7BV89	unidentified_phage	5.4e-12	71.4
WP_014256673.1\|4332700_4333120_-\|holin	phage holin family protein	A0A2K5B2A2	Erysipelothrix_phage	7.2e-51	71.3
WP_014256674.1\|4333207_4335676_-	glycosyl hydrolase	A0A2K5B2A1	Erysipelothrix_phage	0.0e+00	68.6
WP_014256675.1\|4335672_4336248_-	hypothetical protein	A0A2K5B2A0	Erysipelothrix_phage	8.9e-52	51.9
WP_003520677.1\|4336257_4336452_-	hypothetical protein	A0A2K5B299	Erysipelothrix_phage	2.2e-18	66.2
WP_014256676.1\|4336462_4338985_-\|tail	phage tail protein	A0A2K5B298	Erysipelothrix_phage	0.0e+00	63.3
WP_014256677.1\|4338989_4339763_-\|tail	phage tail family protein	A0A2I4R672	Erysipelothrix_phage	4.2e-73	51.6
WP_014256678.1\|4339776_4341963_-	hypothetical protein	A0A2K5B297	Erysipelothrix_phage	2.4e-12	38.5
WP_003520671.1\|4341990_4342182_-	hypothetical protein	A0A2K5B296	Erysipelothrix_phage	3.9e-12	75.6
WP_014256679.1\|4342178_4342562_-	hypothetical protein	A0A2K5B295	Erysipelothrix_phage	5.7e-39	68.0
WP_014256680.1\|4342561_4343161_-\|tail	phage tail protein	A0A2K5B294	Erysipelothrix_phage	6.8e-79	74.2
WP_004400082.1\|4343166_4343511_-	hypothetical protein	A0A2K5B293	Erysipelothrix_phage	2.6e-30	55.9
WP_014256681.1\|4343507_4343939_-	HK97 gp10 family phage protein	A0A2K5B292	Erysipelothrix_phage	1.6e-45	62.2
WP_014256682.1\|4343956_4344292_-\|head,tail	head-tail adaptor protein	A0A2K5B291	Erysipelothrix_phage	1.6e-29	58.7
WP_014256683.1\|4344399_4344708_-\|head,tail	phage gp6-like head-tail connector protein	A0A2K5B290	Erysipelothrix_phage	6.7e-38	73.5
WP_013297316.1\|4344728_4345931_-\|capsid	phage major capsid protein	A0A2I4R671	Erysipelothrix_phage	4.9e-177	78.2
WP_004400077.1\|4345981_4346710_-\|protease	Clp protease ClpP	A0A2K5B288	Erysipelothrix_phage	8.6e-76	64.4
WP_014256684.1\|4346648_4347971_-\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	1.4e-188	75.2
WP_014256685.1\|4347967_4349620_-\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	3.0e-249	77.2
WP_014256686.1\|4349674_4349869_-	DUF5049 domain-containing protein	NA	NA	NA	NA
WP_014256687.1\|4349872_4350340_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_014256688.1\|4350401_4351301_-	amidoligase family protein	A0A2K9V489	Faecalibacterium_phage	1.1e-53	41.1
WP_014256689.1\|4351442_4351673_-	DUF4314 domain-containing protein	NA	NA	NA	NA
WP_014256690.1\|4351669_4352005_-	hypothetical protein	NA	NA	NA	NA
WP_013782364.1\|4351997_4352690_-	virulence factor	A0A2K5B280	Erysipelothrix_phage	6.3e-28	35.2
WP_014256691.1\|4352806_4354060_-	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	9.2e-102	47.2
WP_014256692.1\|4354065_4355364_-	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	4.0e-76	40.3
WP_014256693.1\|4355338_4355521_-	hypothetical protein	NA	NA	NA	NA
WP_014256694.1\|4355520_4356072_-\|terminase	P27 family phage terminase small subunit	A0A2K5B277	Erysipelothrix_phage	2.4e-70	68.1
WP_014256695.1\|4356192_4356552_-	HNH endonuclease	A0A2K5B276	Erysipelothrix_phage	2.9e-40	61.3
WP_014256599.1\|4356685_4356916_-	hypothetical protein	NA	NA	NA	NA
WP_004400053.1\|4357040_4357496_-	hypothetical protein	NA	NA	NA	NA
WP_014256696.1\|4357587_4357890_-	VRR-NUC domain-containing protein	I3VYX6	Thermoanaerobacterium_phage	2.8e-25	62.9
WP_014256697.1\|4358189_4360745_-	DNA primase	D6R422	Bacillus_phage	1.5e-50	39.7
WP_011838167.1\|4360741_4361167_-	hypothetical protein	A0A2K5B270	Erysipelothrix_phage	2.9e-47	61.0
WP_014256698.1\|4361182_4362004_-	phage antirepressor KilAC domain-containing protein	A0A1Q1PVZ8	Staphylococcus_phage	7.2e-71	50.2
WP_014256699.1\|4362008_4363931_-	bifunctional 3'-5' exonuclease/DNA polymerase	A0A142F1Q9	Bacillus_phage	6.6e-51	29.3
WP_014256700.1\|4363988_4364741_-	hypothetical protein	I3VYY1	Thermoanaerobacterium_phage	3.9e-47	43.2
WP_041715285.1\|4364862_4365303_-	hypothetical protein	I3VYY4	Thermoanaerobacterium_phage	3.4e-27	47.7
WP_041715287.1\|4365268_4366741_-	DEAD/DEAH box helicase	I3VYY6	Thermoanaerobacterium_phage	1.7e-126	49.9

DBSCAN-SWA_15

4398214 : 4427363

Planktothrix_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_174269793.1\|4398214_4399426_-\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	1.6e-95	48.2
WP_014256739.1\|4399628_4399934_-	transcriptional regulator	NA	NA	NA	NA
WP_014256740.1\|4399935_4400541_-	hypothetical protein	NA	NA	NA	NA
WP_014256741.1\|4400773_4400926_+	hypothetical protein	NA	NA	NA	NA
WP_014256742.1\|4401081_4401966_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014256743.1\|4401987_4402698_-	ABC transporter permease	NA	NA	NA	NA
WP_174269790.1\|4402737_4403526_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	3.9e-34	39.1
WP_014256745.1\|4403979_4404426_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_014256746.1\|4404678_4405218_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014256747.1\|4405162_4406638_+	nitrogenase molybdenum-iron protein subunit alpha/beta	NA	NA	NA	NA
WP_014256748.1\|4406634_4407978_+	hydrogenase	NA	NA	NA	NA
WP_014256749.1\|4408170_4409721_+\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_014256750.1\|4410584_4411343_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	5.6e-46	41.9
WP_148263837.1\|4412334_4413537_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.8e-46	45.5
WP_117405975.1\|4414125_4415523_-\|transposase	transposase	NA	NA	NA	NA
WP_014256752.1\|4415643_4416591_-	biotin/lipoyl-binding protein	NA	NA	NA	NA
WP_027622197.1\|4416587_4417283_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.8e-38	41.7
WP_014256754.1\|4417343_4419833_-	ABC transporter permease	NA	NA	NA	NA
WP_014256755.1\|4419936_4420773_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_052306620.1\|4420769_4421354_-	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_014256757.1\|4421340_4421673_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_169313368.1\|4421971_4422112_-	hypothetical protein	NA	NA	NA	NA
WP_014256759.1\|4422193_4423471_-	hypothetical protein	NA	NA	NA	NA
WP_014256760.1\|4423493_4423631_-	hypothetical protein	NA	NA	NA	NA
WP_014256761.1\|4423724_4423871_-	hypothetical protein	NA	NA	NA	NA
WP_014254024.1\|4424291_4425581_+\|transposase	IS110 family transposase	A0A0U3ULR1	Bacillus_phage	2.4e-36	29.1
WP_014256762.1\|4425848_4425986_-	hypothetical protein	NA	NA	NA	NA
WP_027622199.1\|4426211_4427363_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	5.6e-21	30.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_016627

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection