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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_017351 Staphylococcus aureus subsp. aureus 11819-97, complete sequence 8 crisprs WYL,cas3,DEDDh,DinG,csa3,RT 5 9 11 0
NC_017350 Staphylococcus aureus subsp. aureus 11819-97 plasmid p11819-97, complete sequence 0 crisprs csa3 0 0 0 0

Results visualization

1. NC_017351
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017351_1 871209-871290 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017351_2 890288-891249 Orphan NA
12 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017351_3 1258679-1258763 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017351_4 1727667-1727752 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017351_5 2016580-2016664 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017351_6 2262006-2262092 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017351_7 2485915-2486008 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_017351_8 2518928-2519025 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NC_017351.1 379384-379415 1 0.969
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NC_017351.1 1100266-1100297 1 0.969
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NC_017351.1 605612-605633 1 0.955
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NC_017351.1 605792-605813 1 0.955
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NC_017351.1 605846-605867 1 0.955
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NC_017351.1 610316-610337 1 0.955
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NC_017351.1 2750383-2750404 1 0.955
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NC_017351.1 2750509-2750530 1 0.955
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NC_017351.1 2750659-2750680 1 0.955
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NC_017351.1 605762-605783 1 0.955
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NC_017351.1 610232-610253 1 0.955
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NC_017351.1 610358-610379 1 0.955
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NC_017351.1 610430-610451 1 0.955
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NC_017351.1 614142-614163 1 0.955
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NC_017351.1 614262-614283 1 0.955
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NC_017351.1 2750413-2750434 1 0.955
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NC_017351.1 182454-182485 2 0.938
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NC_017351.1 301479-301510 2 0.938
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NC_017351.1 379439-379470 2 0.938
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NC_017351.1 817122-817153 2 0.938
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NC_017351.1 858716-858747 2 0.938
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NC_017351.1 864152-864183 2 0.938
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NC_017351.1 1073888-1073919 2 0.938
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NC_017351.1 1074004-1074035 2 0.938
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NC_017351.1 1379785-1379816 2 0.938
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NC_017351.1 1468890-1468921 2 0.938
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NC_017351.1 1693742-1693773 2 0.938
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NC_017351.1 1727768-1727799 2 0.938
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NC_017351.1 2372228-2372259 2 0.938
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NC_017351.1 2559658-2559689 2 0.938
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NC_017351.1 605450-605471 2 0.909
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NC_017351.1 609872-609893 2 0.909
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NC_017351.1 609890-609911 2 0.909
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NC_017351.1 610388-610409 2 0.909
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NC_017351.1 610424-610445 2 0.909
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NC_017351.1 614010-614031 2 0.909
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NC_017351.1 614292-614313 2 0.909
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NC_017351.1 2750857-2750878 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NC_017351.1 610178-610199 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NC_017351.1 610286-610307 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NC_017351.1 613962-613983 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NC_017351.1 614088-614109 2 0.909
NC_017351_2 2.12|891184|34|NC_017351|CRT 891184-891217 34 NC_017351.1 613980-614013 2 0.941
NC_017351_4 4.1|1727694|32|NC_017351|CRISPRCasFinder 1727694-1727725 32 NC_017351.1 286062-286093 2 0.938
NC_017351_4 4.1|1727694|32|NC_017351|CRISPRCasFinder 1727694-1727725 32 NC_017351.1 286276-286307 2 0.938
NC_017351_4 4.1|1727694|32|NC_017351|CRISPRCasFinder 1727694-1727725 32 NC_017351.1 379286-379317 2 0.938
NC_017351_4 4.1|1727694|32|NC_017351|CRISPRCasFinder 1727694-1727725 32 NC_017351.1 1073814-1073845 2 0.938
NC_017351_4 4.1|1727694|32|NC_017351|CRISPRCasFinder 1727694-1727725 32 NC_017351.1 1073930-1073961 2 0.938
NC_017351_4 4.1|1727694|32|NC_017351|CRISPRCasFinder 1727694-1727725 32 NC_017351.1 1174796-1174827 2 0.938
NC_017351_4 4.1|1727694|32|NC_017351|CRISPRCasFinder 1727694-1727725 32 NC_017351.1 1258670-1258701 2 0.938
NC_017351_4 4.1|1727694|32|NC_017351|CRISPRCasFinder 1727694-1727725 32 NC_017351.1 2640842-2640873 2 0.938

1. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to position: 379384-379415, mismatch: 1, identity: 0.969

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
tttcttttcgaaattctctatgttggggcccc	Protospacer
**** ***************************

2. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to position: 1100266-1100297, mismatch: 1, identity: 0.969

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
tttcttttcgaaattctctatgttggggcccc	Protospacer
**** ***************************

3. spacer 2.9|891022|22|NC_017351|CRT matches to position: 605612-605633, mismatch: 1, identity: 0.955

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcagactca	Protospacer
*************** ******

4. spacer 2.9|891022|22|NC_017351|CRT matches to position: 605792-605813, mismatch: 1, identity: 0.955

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcggactca	Protospacer
*************** ******

5. spacer 2.9|891022|22|NC_017351|CRT matches to position: 605846-605867, mismatch: 1, identity: 0.955

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcggactca	Protospacer
*************** ******

6. spacer 2.9|891022|22|NC_017351|CRT matches to position: 610316-610337, mismatch: 1, identity: 0.955

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcggactca	Protospacer
*************** ******

7. spacer 2.9|891022|22|NC_017351|CRT matches to position: 2750383-2750404, mismatch: 1, identity: 0.955

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcggactca	Protospacer
*************** ******

8. spacer 2.9|891022|22|NC_017351|CRT matches to position: 2750509-2750530, mismatch: 1, identity: 0.955

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcagactca	Protospacer
*************** ******

9. spacer 2.9|891022|22|NC_017351|CRT matches to position: 2750659-2750680, mismatch: 1, identity: 0.955

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcagactca	Protospacer
*************** ******

10. spacer 2.11|891130|22|NC_017351|CRT matches to position: 605762-605783, mismatch: 1, identity: 0.955

cagcgattcagactcagacagt	CRISPR spacer
cagcgattcagaatcagacagt	Protospacer
************ *********

11. spacer 2.11|891130|22|NC_017351|CRT matches to position: 610232-610253, mismatch: 1, identity: 0.955

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagt	Protospacer
***.******************

12. spacer 2.11|891130|22|NC_017351|CRT matches to position: 610358-610379, mismatch: 1, identity: 0.955

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagacagt	Protospacer
******.***************

13. spacer 2.11|891130|22|NC_017351|CRT matches to position: 610430-610451, mismatch: 1, identity: 0.955

cagcgattcagactcagacagt	CRISPR spacer
cagcgattcagactcagatagt	Protospacer
******************.***

14. spacer 2.11|891130|22|NC_017351|CRT matches to position: 614142-614163, mismatch: 1, identity: 0.955

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagacagt	Protospacer
******.***************

15. spacer 2.11|891130|22|NC_017351|CRT matches to position: 614262-614283, mismatch: 1, identity: 0.955

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagacagt	Protospacer
******.***************

16. spacer 2.11|891130|22|NC_017351|CRT matches to position: 2750413-2750434, mismatch: 1, identity: 0.955

cagcgattcagactcagacagt	CRISPR spacer
cagcgattcagaatcagacagt	Protospacer
************ *********

17. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to position: 182454-182485, mismatch: 2, identity: 0.938

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggcccc	Protospacer
**** **************.************

18. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to position: 301479-301510, mismatch: 2, identity: 0.938

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggcccc	Protospacer
**** **************.************

19. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to position: 379439-379470, mismatch: 2, identity: 0.938

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
tttcttttcgaaattctctttgttggggcccc	Protospacer
**** ************** ************

20. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to position: 817122-817153, mismatch: 2, identity: 0.938

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggcccc	Protospacer
**** **************.************

21. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to position: 858716-858747, mismatch: 2, identity: 0.938

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggcccc	Protospacer
**** **************.************

22. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to position: 864152-864183, mismatch: 2, identity: 0.938

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggcccc	Protospacer
**** **************.************

23. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to position: 1073888-1073919, mismatch: 2, identity: 0.938

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggcccc	Protospacer
**** **************.************

24. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to position: 1074004-1074035, mismatch: 2, identity: 0.938

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggcccc	Protospacer
**** **************.************

25. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to position: 1379785-1379816, mismatch: 2, identity: 0.938

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggcccc	Protospacer
**** **************.************

26. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to position: 1468890-1468921, mismatch: 2, identity: 0.938

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggcccc	Protospacer
**** **************.************

27. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to position: 1693742-1693773, mismatch: 2, identity: 0.938

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggcccc	Protospacer
**** **************.************

28. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to position: 1727768-1727799, mismatch: 2, identity: 0.938

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
tttctttacgaaattctctatgttggggcccc	Protospacer
**** ** ************************

29. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to position: 2372228-2372259, mismatch: 2, identity: 0.938

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
tttctttttgaaattctctatgttggggcccc	Protospacer
**** ***.***********************

30. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to position: 2559658-2559689, mismatch: 2, identity: 0.938

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggcccc	Protospacer
**** **************.************

31. spacer 2.9|891022|22|NC_017351|CRT matches to position: 605450-605471, mismatch: 2, identity: 0.909

ttcagatagcgattctgactca	CRISPR spacer
ttcagacagcgattcagactca	Protospacer
******.******** ******

32. spacer 2.9|891022|22|NC_017351|CRT matches to position: 609872-609893, mismatch: 2, identity: 0.909

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcagattca	Protospacer
*************** **.***

33. spacer 2.9|891022|22|NC_017351|CRT matches to position: 609890-609911, mismatch: 2, identity: 0.909

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgactcagactca	Protospacer
************.** ******

34. spacer 2.9|891022|22|NC_017351|CRT matches to position: 610388-610409, mismatch: 2, identity: 0.909

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgactcagactca	Protospacer
************.** ******

35. spacer 2.9|891022|22|NC_017351|CRT matches to position: 610424-610445, mismatch: 2, identity: 0.909

ttcagatagcgattctgactca	CRISPR spacer
ttcagacagcgattcagactca	Protospacer
******.******** ******

36. spacer 2.9|891022|22|NC_017351|CRT matches to position: 614010-614031, mismatch: 2, identity: 0.909

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgactcagactca	Protospacer
************.** ******

37. spacer 2.9|891022|22|NC_017351|CRT matches to position: 614292-614313, mismatch: 2, identity: 0.909

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgactcagactca	Protospacer
************.** ******

38. spacer 2.9|891022|22|NC_017351|CRT matches to position: 2750857-2750878, mismatch: 2, identity: 0.909

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcagaatca	Protospacer
*************** ** ***

39. spacer 2.11|891130|22|NC_017351|CRT matches to position: 610178-610199, mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagatagt	Protospacer
******.***********.***

40. spacer 2.11|891130|22|NC_017351|CRT matches to position: 610286-610307, mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagatagt	Protospacer
******.***********.***

41. spacer 2.11|891130|22|NC_017351|CRT matches to position: 613962-613983, mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagatagt	Protospacer
***.**************.***

42. spacer 2.11|891130|22|NC_017351|CRT matches to position: 614088-614109, mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgattcagattcagatagt	Protospacer
************.*****.***

43. spacer 2.12|891184|34|NC_017351|CRT matches to position: 613980-614013, mismatch: 2, identity: 0.941

tagtgactccgacttagacagcgactcagattca	CRISPR spacer
tagtgactcagactcagacagcgactcagattca	Protospacer
********* ****.*******************

44. spacer 4.1|1727694|32|NC_017351|CRISPRCasFinder matches to position: 286062-286093, mismatch: 2, identity: 0.938

gcacattattgaaagctgacttttggtcagct	CRISPR spacer
gcacattattgtaagctgacttttcgtcagct	Protospacer
*********** ************ *******

45. spacer 4.1|1727694|32|NC_017351|CRISPRCasFinder matches to position: 286276-286307, mismatch: 2, identity: 0.938

gcacattattgaaagctgacttttggtcagct	CRISPR spacer
gcacattattgtaagctgacttttcgtcagct	Protospacer
*********** ************ *******

46. spacer 4.1|1727694|32|NC_017351|CRISPRCasFinder matches to position: 379286-379317, mismatch: 2, identity: 0.938

gcacattattgaaagctgacttttggtcagct	CRISPR spacer
gcacattattgtaagctgacttttcgtcagct	Protospacer
*********** ************ *******

47. spacer 4.1|1727694|32|NC_017351|CRISPRCasFinder matches to position: 1073814-1073845, mismatch: 2, identity: 0.938

gcacattattgaaagctgacttttggtcagct	CRISPR spacer
gcacattattgtaagctgacttttcgtcagct	Protospacer
*********** ************ *******

48. spacer 4.1|1727694|32|NC_017351|CRISPRCasFinder matches to position: 1073930-1073961, mismatch: 2, identity: 0.938

gcacattattgaaagctgacttttggtcagct	CRISPR spacer
gcacattattgtaagctgacttttcgtcagct	Protospacer
*********** ************ *******

49. spacer 4.1|1727694|32|NC_017351|CRISPRCasFinder matches to position: 1174796-1174827, mismatch: 2, identity: 0.938

gcacattattgaaagctgacttttggtcagct	CRISPR spacer
gcacattattgtaagctgacttttcgtcagct	Protospacer
*********** ************ *******

50. spacer 4.1|1727694|32|NC_017351|CRISPRCasFinder matches to position: 1258670-1258701, mismatch: 2, identity: 0.938

gcacattattgaaagctgacttttggtcagct	CRISPR spacer
gcacattattgtaagctgacttttcgtcagct	Protospacer
*********** ************ *******

51. spacer 4.1|1727694|32|NC_017351|CRISPRCasFinder matches to position: 2640842-2640873, mismatch: 2, identity: 0.938

gcacattattgaaagctgacttttggtcagct	CRISPR spacer
gcacattattgtaagctgacttttcgtcagct	Protospacer
*********** ************ *******

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NZ_CP023562 Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence 21199-21220 1 0.955
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NZ_CP023562 Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence 21253-21274 1 0.955
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NZ_CP047808 Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence 15820-15841 1 0.955
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NZ_CP047808 Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence 15874-15895 1 0.955
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9757-9778 1 0.955
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9811-9832 1 0.955
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9901-9922 1 0.955
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9955-9976 1 0.955
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_CP023562 Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence 21181-21202 1 0.955
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_CP023562 Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence 21271-21292 1 0.955
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_CP047808 Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence 15802-15823 1 0.955
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_CP047808 Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence 15892-15913 1 0.955
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9739-9760 1 0.955
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9883-9904 1 0.955
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 20033-20054 1 0.955
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP023562 Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence 21085-21106 1 0.955
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP047808 Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence 15472-15493 1 0.955
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP047808 Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence 15580-15601 1 0.955
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP047808 Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence 15706-15727 1 0.955
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9643-9664 1 0.955
NC_017351_2 2.9|891022|22|NC_017351|CRT 891022-891043 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9595-9616 2 0.909
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_CP023562 Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence 21145-21166 2 0.909
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_CP023562 Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence 21235-21256 2 0.909
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_CP023562 Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence 21343-21364 2 0.909
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_CP047808 Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence 15856-15877 2 0.909
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_CP047808 Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence 15946-15967 2 0.909
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9829-9850 2 0.909
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9703-9724 2 0.909
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9793-9814 2 0.909
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9847-9868 2 0.909
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9937-9958 2 0.909
NC_017351_2 2.10|891076|22|NC_017351|CRT 891076-891097 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 19919-19940 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 16079-16100 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 16211-16232 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 16343-16364 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 17369-17390 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 17519-17540 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 17585-17606 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 17849-17870 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 18101-18122 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 18245-18266 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 18587-18608 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 18683-18704 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 18833-18854 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 19331-19352 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 19583-19604 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 19655-19676 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 19727-19748 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 19787-19808 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 19907-19928 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 20093-20114 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP023562 Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence 21193-21214 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP023562 Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence 21121-21142 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP023562 Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence 21247-21268 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP023562 Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence 21283-21304 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP023562 Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence 21301-21322 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP023562 Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence 21319-21340 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP023562 Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence 21355-21376 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP047808 Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence 15814-15835 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP047808 Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence 15760-15781 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP047808 Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence 15868-15889 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP047808 Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence 15904-15925 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP047808 Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence 15922-15943 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9751-9772 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9895-9916 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9589-9610 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9679-9700 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9805-9826 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9949-9970 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_LT009691 Staphylococcus aureus strain NZAK3 plasmid 2 9985-10006 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 LR134125 Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5 156007-156028 2 0.909
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 17465-17486 3 0.864
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 18779-18800 3 0.864
NC_017351_2 2.11|891130|22|NC_017351|CRT 891130-891151 22 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 19925-19946 3 0.864
NC_017351_6 6.1|2262033|33|NC_017351|CRISPRCasFinder 2262033-2262065 33 JN882286 Cronobacter phage vB_CsaP_GAP52, complete genome 23035-23067 7 0.788
NC_017351_6 6.1|2262033|33|NC_017351|CRISPRCasFinder 2262033-2262065 33 CP030544 Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence 7568-7600 7 0.788
NC_017351_7 7.1|2485948|28|NC_017351|CRISPRCasFinder 2485948-2485975 28 NZ_CP017941 Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence 286024-286051 7 0.75
NC_017351_5 5.1|2016606|33|NC_017351|CRISPRCasFinder 2016606-2016638 33 MT150133 Enterobacteria phage vB_EcoM_IME540, complete genome 25909-25941 8 0.758
NC_017351_5 5.1|2016606|33|NC_017351|CRISPRCasFinder 2016606-2016638 33 MK234886 Escherichia phage AnYang, complete genome 114958-114990 8 0.758
NC_017351_5 5.1|2016606|33|NC_017351|CRISPRCasFinder 2016606-2016638 33 MF036691 Serratia phage CBH8, complete genome 7593-7625 8 0.758
NC_017351_5 5.1|2016606|33|NC_017351|CRISPRCasFinder 2016606-2016638 33 MF036690 Serratia phage CHI14, complete genome 7593-7625 8 0.758
NC_017351_5 5.1|2016606|33|NC_017351|CRISPRCasFinder 2016606-2016638 33 MF036692 Serratia phage X20, complete genome 7813-7845 8 0.758
NC_017351_2 2.8|890950|40|NC_017351|CRT 890950-890989 40 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 16613-16652 9 0.775
NC_017351_2 2.8|890950|40|NC_017351|CRT 890950-890989 40 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 16925-16964 9 0.775
NC_017351_2 2.8|890950|40|NC_017351|CRT 890950-890989 40 NZ_CP035292 Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence 18281-18320 9 0.775
NC_017351_2 2.12|891184|34|NC_017351|CRT 891184-891217 34 MN582098 Podoviridae sp. ctKoA10, complete genome 1995-2028 10 0.706
NC_017351_1 1.1|871234|32|NC_017351|CRISPRCasFinder 871234-871265 32 NZ_CP018781 Ochrobactrum pituitosum strain AA2 plasmid pOAAA2, complete sequence 148984-149015 11 0.656

1. spacer 2.9|891022|22|NC_017351|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 1, identity: 0.955

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcagactca	Protospacer
*************** ******

2. spacer 2.9|891022|22|NC_017351|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 1, identity: 0.955

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcggactca	Protospacer
*************** ******

3. spacer 2.9|891022|22|NC_017351|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.955

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcagactca	Protospacer
*************** ******

4. spacer 2.9|891022|22|NC_017351|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.955

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcggactca	Protospacer
*************** ******

5. spacer 2.9|891022|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 1, identity: 0.955

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcagactca	Protospacer
*************** ******

6. spacer 2.9|891022|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 1, identity: 0.955

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcggactca	Protospacer
*************** ******

7. spacer 2.9|891022|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 1, identity: 0.955

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcagactca	Protospacer
*************** ******

8. spacer 2.9|891022|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 1, identity: 0.955

ttcagatagcgattctgactca	CRISPR spacer
ttcagatagcgattcggactca	Protospacer
*************** ******

9. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 1, identity: 0.955

ctcagacagcgattcagattcc	CRISPR spacer
ctcagacagcgattcagattca	Protospacer
********************* 

10. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 1, identity: 0.955

ctcagacagcgattcagattcc	CRISPR spacer
ctcagacagcgattcagattca	Protospacer
********************* 

11. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.955

ctcagacagcgattcagattcc	CRISPR spacer
ctcagacagcgattcagattca	Protospacer
********************* 

12. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.955

ctcagacagcgattcagattcc	CRISPR spacer
ctcagacagcgattcagattca	Protospacer
********************* 

13. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 1, identity: 0.955

ctcagacagcgattcagattcc	CRISPR spacer
ctcagacagcgattcagattca	Protospacer
********************* 

14. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 1, identity: 0.955

ctcagacagcgattcagattcc	CRISPR spacer
ctcagacagcgattcagattca	Protospacer
********************* 

15. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.955

cagcgattcagactcagacagt	CRISPR spacer
cagcgattcagactcagacagc	Protospacer
*********************.

16. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 1, identity: 0.955

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagt	Protospacer
***.******************

17. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.955

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagt	Protospacer
***.******************

18. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.955

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagt	Protospacer
***.******************

19. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.955

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagt	Protospacer
***.******************

20. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 1, identity: 0.955

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagt	Protospacer
***.******************

21. spacer 2.9|891022|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 2, identity: 0.909

ttcagatagcgattctgactca	CRISPR spacer
ctcagatagcgattcagactca	Protospacer
.************** ******

22. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 2, identity: 0.909

ctcagacagcgattcagattcc	CRISPR spacer
ctcagacagcgactcagattca	Protospacer
************.******** 

23. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 2, identity: 0.909

ctcagacagcgattcagattcc	CRISPR spacer
ctcagacagtgattcagattca	Protospacer
*********.*********** 

24. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 2, identity: 0.909

ctcagacagcgattcagattcc	CRISPR spacer
ctcagacagcgactcagattca	Protospacer
************.******** 

25. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.909

ctcagacagcgattcagattcc	CRISPR spacer
ctcagacagtgattcagattca	Protospacer
*********.*********** 

26. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.909

ctcagacagcgattcagattcc	CRISPR spacer
ctcagacagcgactcagattca	Protospacer
************.******** 

27. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 2, identity: 0.909

ctcagacagcgattcagattcc	CRISPR spacer
ttcagacagcgattcagattca	Protospacer
.******************** 

28. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 2, identity: 0.909

ctcagacagcgattcagattcc	CRISPR spacer
ctcagacagcgactcagattca	Protospacer
************.******** 

29. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 2, identity: 0.909

ctcagacagcgattcagattcc	CRISPR spacer
ctcagacagtgattcagattca	Protospacer
*********.*********** 

30. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 2, identity: 0.909

ctcagacagcgattcagattcc	CRISPR spacer
ctcagacagcgactcagattca	Protospacer
************.******** 

31. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 2, identity: 0.909

ctcagacagcgattcagattcc	CRISPR spacer
ctcagacagtgattcagattca	Protospacer
*********.*********** 

32. spacer 2.10|891076|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

ctcagacagcgattcagattcc	CRISPR spacer
ctcagacagcgattcagactca	Protospacer
******************.** 

33. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagc	Protospacer
***.*****************.

34. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagc	Protospacer
***.*****************.

35. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagc	Protospacer
***.*****************.

36. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagc	Protospacer
***.*****************.

37. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagc	Protospacer
***.*****************.

38. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagc	Protospacer
***.*****************.

39. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagacagc	Protospacer
******.**************.

40. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagc	Protospacer
***.*****************.

41. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagc	Protospacer
***.*****************.

42. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagacagc	Protospacer
******.**************.

43. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagc	Protospacer
***.*****************.

44. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagc	Protospacer
***.*****************.

45. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagacagc	Protospacer
******.**************.

46. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagc	Protospacer
***.*****************.

47. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgattcagactcagatagc	Protospacer
******************.**.

48. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagc	Protospacer
***.*****************.

49. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagc	Protospacer
***.*****************.

50. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagc	Protospacer
***.*****************.

51. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagtgattcagactcagacagc	Protospacer
***.*****************.

52. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
tagcgattcagactcagacagc	Protospacer
.********************.

53. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagacagc	Protospacer
******.**************.

54. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
tagcgattcggactcagacagt	Protospacer
.********.************

55. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagacagc	Protospacer
******.**************.

56. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagacagc	Protospacer
******.**************.

57. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagacagc	Protospacer
******.**************.

58. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagacagc	Protospacer
******.**************.

59. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
tagcgattcagactcagacagc	Protospacer
.********************.

60. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagacagc	Protospacer
******.**************.

61. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
tagcgattcggactcagacagt	Protospacer
.********.************

62. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagacagc	Protospacer
******.**************.

63. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagacagc	Protospacer
******.**************.

64. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
tagcgattcagactcagacagc	Protospacer
.********************.

65. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
tagcgattcagactcagacagc	Protospacer
.********************.

66. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
tagcgattcagactcagatagt	Protospacer
.*****************.***

67. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagacagc	Protospacer
******.**************.

68. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
tagcgattcggactcagacagt	Protospacer
.********.************

69. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
tagcgattcggactcagacagt	Protospacer
.********.************

70. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgactcagactcagacagc	Protospacer
******.**************.

71. spacer 2.11|891130|22|NC_017351|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 2, identity: 0.909

cagcgattcagactcagacagt	CRISPR spacer
cagcgattccgactcagacagc	Protospacer
********* ***********.

72. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.864

cagcgattcagactcagacagt	CRISPR spacer
cagcgattcagactcagactca	Protospacer
*******************   

73. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.864

cagcgattcagactcagacagt	CRISPR spacer
cagcgattcagactcagactca	Protospacer
*******************   

74. spacer 2.11|891130|22|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.864

cagcgattcagactcagacagt	CRISPR spacer
cagcgattcagactcagacgca	Protospacer
*******************.  

75. spacer 6.1|2262033|33|NC_017351|CRISPRCasFinder matches to JN882286 (Cronobacter phage vB_CsaP_GAP52, complete genome) position: , mismatch: 7, identity: 0.788

ttgcatatctttagctttattgtttgcaactga	CRISPR spacer
ttgcatatctttagctttatagcttttatatgc	Protospacer
******************** *.** .*  ** 

76. spacer 6.1|2262033|33|NC_017351|CRISPRCasFinder matches to CP030544 (Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

ttgcatatctttagctttattgtttgcaactga	CRISPR spacer
ttgaataactttagctttattgttataaacagt	Protospacer
*** *** ****************   *** * 

77. spacer 7.1|2485948|28|NC_017351|CRISPRCasFinder matches to NZ_CP017941 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.75

cacttcgcttcggttcgcctgcgctttt	CRISPR spacer
tgtttcgcttcggatcgcctgagcttcc	Protospacer
...********** ******* ****..

78. spacer 5.1|2016606|33|NC_017351|CRISPRCasFinder matches to MT150133 (Enterobacteria phage vB_EcoM_IME540, complete genome) position: , mismatch: 8, identity: 0.758

ttgcctgtagaatttcttttttgaaattctcta	CRISPR spacer
taacaaagagaatttctttttcaaaattctcta	Protospacer
* .*  . *************..**********

79. spacer 5.1|2016606|33|NC_017351|CRISPRCasFinder matches to MK234886 (Escherichia phage AnYang, complete genome) position: , mismatch: 8, identity: 0.758

ttgcctgtagaatttcttttttgaaattctcta	CRISPR spacer
taacaaagagaatttctttttcaaaattctcta	Protospacer
* .*  . *************..**********

80. spacer 5.1|2016606|33|NC_017351|CRISPRCasFinder matches to MF036691 (Serratia phage CBH8, complete genome) position: , mismatch: 8, identity: 0.758

ttgcctgt---agaatttcttttttgaaattctcta	CRISPR spacer
---gatgtgaaaggatttcttttttgaaattatctt	Protospacer
     ***   **.***************** *** 

81. spacer 5.1|2016606|33|NC_017351|CRISPRCasFinder matches to MF036690 (Serratia phage CHI14, complete genome) position: , mismatch: 8, identity: 0.758

ttgcctgt---agaatttcttttttgaaattctcta	CRISPR spacer
---gatgtgaaaggatttcttttttgaaattatctt	Protospacer
     ***   **.***************** *** 

82. spacer 5.1|2016606|33|NC_017351|CRISPRCasFinder matches to MF036692 (Serratia phage X20, complete genome) position: , mismatch: 8, identity: 0.758

ttgcctgt---agaatttcttttttgaaattctcta	CRISPR spacer
---gatgtgaaaggatttcttttttgaaattatctt	Protospacer
     ***   **.***************** *** 

83. spacer 2.8|890950|40|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.775

ttcagatagcgattcagactcagacagtgactcggattca	CRISPR spacer
tagcgactctgattcagactcagacagcgactctgattca	Protospacer
*   **.  .*****************.***** ******

84. spacer 2.8|890950|40|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.775

ttcagatagcgattcagactcagacagtgactcggattca	CRISPR spacer
tagcgactctgattcagactcagacagcgactctgattca	Protospacer
*   **.  .*****************.***** ******

85. spacer 2.8|890950|40|NC_017351|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.775

ttcagatagcgattcagactcagacagtgactcggattca	CRISPR spacer
tagcgactctgattcagactcagacagcgactctgattca	Protospacer
*   **.  .*****************.***** ******

86. spacer 2.12|891184|34|NC_017351|CRT matches to MN582098 (Podoviridae sp. ctKoA10, complete genome) position: , mismatch: 10, identity: 0.706

tagtgactccgacttagacagcgactcagattca	CRISPR spacer
tgacaactccgactttgacaacgactcagacgtt	Protospacer
*....********** ****.*********. . 

87. spacer 1.1|871234|32|NC_017351|CRISPRCasFinder matches to NZ_CP018781 (Ochrobactrum pituitosum strain AA2 plasmid pOAAA2, complete sequence) position: , mismatch: 11, identity: 0.656

tttcatttcgaaattctctatgttggggcccc	CRISPR spacer
accatcttcgtaatgctctatgttggggcggt	Protospacer
 ..  .**** *** **************  .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 63073 : 69842 9 Streptococcus_phage(71.43%) transposase NA
DBSCAN-SWA_2 643673 : 712080 92 Staphylococcus_phage(83.33%) holin,portal,terminase,tRNA,integrase,tail,capsid,plate,head,transposase attL 688839:688855|attR 716849:716865
DBSCAN-SWA_3 796191 : 804011 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_4 815983 : 830312 14 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_5 1001482 : 1055271 53 Streptococcus_phage(33.33%) tRNA,bacteriocin,protease NA
DBSCAN-SWA_6 1075499 : 1083972 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_7 1522922 : 1610092 103 Staphylococcus_phage(83.12%) holin,capsid,portal,terminase,tRNA,protease,tail,plate,head NA
DBSCAN-SWA_8 1665212 : 1673542 7 Staphylococcus_phage(16.67%) tRNA NA
DBSCAN-SWA_9 1742858 : 1751901 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_10 1875484 : 1947654 69 Staphylococcus_phage(94.64%) tRNA,protease NA
DBSCAN-SWA_11 2031024 : 2125021 111 Staphylococcus_phage(85.53%) holin,capsid,portal,terminase,tRNA,integrase,tail,protease,head attL 2027523:2027544|attR 2114158:2114179
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage