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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_019968 Prevotella dentalis DSM 3688 chromosome 2, complete sequence 4 crisprs cas3,cas5,cas8c,cas7,cas4,cas2,DEDDh,PD-DExK 3 20 2 1
NC_019960 Prevotella dentalis DSM 3688 chromosome 1, complete sequence 5 crisprs cas3,DEDDh 1 0 1 0
NC_019969 Prevotella dentalis DSM 3688 plasmid pPREDE02, complete sequence 0 crisprs NA 0 0 0 0
NC_019961 Prevotella dentalis DSM 3688 plasmid pPREDE01, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NC_019968
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_019968_1 21237-23876 TypeI NA
40 spacers
cas2,cas4,cas7,cas8c,cas5,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_019968_2 777312-777467 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_019968_3 842001-842092 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_019968_4 847894-848078 Orphan NA
3 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_019968_1 1.1|21284|18|NC_019968|PILER-CR 21284-21301 18 NC_019960.1 896811-896828 2 0.889
NC_019968_1 1.25|22700|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22700-22733 34 NC_019960.1 1151461-1151494 0 1.0
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NC_019968.1 503936-503962 1 0.963
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NC_019960.1 1463923-1463949 1 0.963
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NC_019960.1 1773407-1773433 1 0.963
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NC_019960.1 1493467-1493493 1 0.963
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NC_019960.1 691810-691836 2 0.926
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NC_019960.1 714480-714506 2 0.926

1. spacer 1.1|21284|18|NC_019968|PILER-CR matches to position: 896811-896828, mismatch: 2, identity: 0.889

caatgacgtgtcacaaga	CRISPR spacer
caatgtcgtggcacaaga	Protospacer
***** **** *******

2. spacer 1.25|22700|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to position: 1151461-1151494, mismatch: 0, identity: 1.0

gctgctggccccctgcaccagcgaggaattggag	CRISPR spacer
gctgctggccccctgcaccagcgaggaattggag	Protospacer
**********************************

3. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to position: 503936-503962, mismatch: 1, identity: 0.963

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcgggccggtgcggaggccggccccta	Protospacer
*********.*****************

4. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to position: 1463923-1463949, mismatch: 1, identity: 0.963

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcgggccggcacggaggccggccccta	Protospacer
**********.****************

5. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to position: 1773407-1773433, mismatch: 1, identity: 0.963

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcgggccggcgcggagcccggccccta	Protospacer
**************** **********

6. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to position: 1493467-1493493, mismatch: 1, identity: 0.963

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcgggccggcacggaggccggccccta	Protospacer
**********.****************

7. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to position: 691810-691836, mismatch: 2, identity: 0.926

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcgggccggcacggaggccagccccta	Protospacer
**********.********.*******

8. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to position: 714480-714506, mismatch: 2, identity: 0.926

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcggggcggcacggaggccggccccta	Protospacer
***** ****.****************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 MK882925 Dinoroseobacter phage vB_DshS-R4C, complete genome 1819-1845 4 0.852
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 MH669016 Streptomyces phage TrvxScott, complete genome 43400-43426 4 0.852
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 MK392363 Streptomyces phage Bowden, complete genome 43406-43432 4 0.852
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 MK460245 Streptomyces phage BartholomewSD, complete genome 42558-42584 4 0.852
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 MN234208 Streptomyces phage Alvy, complete genome 43439-43465 4 0.852
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP035423 Leisingera sp. NJS204 plasmid unnamed6, complete sequence 28437-28463 5 0.815
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP011045 Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid pCI2, complete sequence 32488-32514 5 0.815
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP021036 Clavibacter michiganensis subsp. insidiosus strain R1-3 plasmid pCI2, complete sequence 31412-31438 5 0.815
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 516143-516169 5 0.815
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP047175 Rathayibacter sp. VKM Ac-2760 plasmid unnamed2, complete sequence 974-1000 5 0.815
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NC_017585 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence 123687-123713 5 0.815
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 LN997843 Streptomyces reticuli genome assembly TUE45, plasmid : II 719703-719729 5 0.815
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NC_016113 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence 1689579-1689605 5 0.815
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 MT708548 Streptomyces phage Salutena, complete genome 38916-38942 5 0.815
NC_019968_1 1.2|21349|29|NC_019968|PILER-CR 21349-21377 29 MK765568 Tortoise microvirus 18 isolate 18_SP_84, complete genome 2305-2333 6 0.793
NC_019968_1 1.44|21599|30|NC_019968|PILER-CR 21599-21628 30 JQ807251 Environmental Halophage eHP-32, partial genome 26435-26464 6 0.8
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NC_010507 Methylobacterium radiotolerans JCM 2831 plasmid pMRAD08, complete sequence 7728-7754 6 0.778
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 1102910-1102936 6 0.778
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP047175 Rathayibacter sp. VKM Ac-2760 plasmid unnamed2, complete sequence 1759-1785 6 0.778
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP003988 Streptomyces sp. 769 plasmid pSGZL, complete sequence 24481-24507 6 0.778
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NC_016623 Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence 615808-615834 6 0.778
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP040820 Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence 167496-167522 6 0.778
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP047184 Rathayibacter sp. VKM Ac-2801 plasmid unnamed, complete sequence 9097-9123 6 0.778
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP047177 Rathayibacter sp. VKM Ac-2759 plasmid unnamed1, complete sequence 64158-64184 6 0.778
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP039699 Novosphingobium sp. ABRDHK2 plasmid pABRDHK234, complete sequence 150068-150094 6 0.778
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP047181 Rathayibacter festucae strain VKM Ac-2802 plasmid unnamed1, complete sequence 6741-6767 6 0.778
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NC_021909 Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence 259662-259688 6 0.778
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP033582 Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence 375593-375619 6 0.778
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP023408 Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence 369431-369457 6 0.778
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 MF766045 Streptomyces phage Daudau, complete genome 42278-42304 6 0.778
NC_019968_1 1.30|23026|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 23026-23058 33 MK448761 Streptococcus phage Javan445, complete genome 26-58 7 0.788
NC_019968_1 1.30|23026|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 23026-23058 33 MK448760 Streptococcus phage Javan443, complete genome 26-58 7 0.788
NC_019968_1 1.44|21599|30|NC_019968|PILER-CR 21599-21628 30 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 266669-266698 7 0.767
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_AP014811 Methylorubrum populi strain P-1M plasmid pMPPM02, complete sequence 12436-12462 7 0.741
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP029174 Methylobacterium sp. DM1 plasmid pLVM1, complete sequence 162257-162283 7 0.741
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP029174 Methylobacterium sp. DM1 plasmid pLVM1, complete sequence 186561-186587 7 0.741
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP029174 Methylobacterium sp. DM1 plasmid pLVM1, complete sequence 68705-68731 7 0.741
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NC_017957 Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence 488954-488980 7 0.741
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP047184 Rathayibacter sp. VKM Ac-2801 plasmid unnamed, complete sequence 10260-10286 7 0.741
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP047177 Rathayibacter sp. VKM Ac-2759 plasmid unnamed1, complete sequence 65321-65347 7 0.741
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP047181 Rathayibacter festucae strain VKM Ac-2802 plasmid unnamed1, complete sequence 5578-5604 7 0.741
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP047174 Rathayibacter sp. VKM Ac-2760 plasmid unnamed1, complete sequence 33872-33898 7 0.741
NC_019968_1 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT 21401-21434 34 NZ_MK715471 Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence 63675-63708 8 0.765
NC_019968_1 1.11|21790|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 21790-21821 32 NZ_CP040345 Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence 21891-21922 8 0.75
NC_019968_1 1.14|21984|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 21984-22015 32 NZ_CP040675 Exiguobacterium mexicanum strain A-EM plasmid punnamed1, complete sequence 1199-1230 8 0.75
NC_019968_1 1.14|21984|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 21984-22015 32 HQ141410 Lactobacillus phage LF1, complete genome 18359-18390 8 0.75
NC_019968_1 1.19|22310|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22310-22341 32 KX898399 Pseudomonas phage JG012, complete genome 48335-48366 8 0.75
NC_019968_1 1.19|22310|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22310-22341 32 NC_031058 Pseudomonas phage NP1, complete genome 50379-50410 8 0.75
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP020899 Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence 431369-431401 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP048109 Klebsiella michiganensis strain BD177 plasmid unnamed1 225898-225930 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP031818 Klebsiella pneumoniae strain INF235-sc-2280127 plasmid unnamed1, complete sequence 386010-386042 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP006989 Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence 461715-461747 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013525 Rhizobium phaseoli strain R744 plasmid pRphaR744c, complete sequence 399405-399437 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013554 Rhizobium phaseoli strain N931 plasmid pRphaN931b, complete sequence 423075-423107 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013588 Rhizobium phaseoli strain N161 plasmid pRphaN161c, complete sequence 398888-398920 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013560 Rhizobium phaseoli strain N841 plasmid pRphaN841c, complete sequence 399473-399505 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013577 Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence 406208-406240 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013549 Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence 405048-405080 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013529 Rhizobium phaseoli strain R723 plasmid pRphaR723b, complete sequence 419446-419478 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013534 Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence 405048-405080 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013539 Rhizobium phaseoli strain R630 plasmid pRphaR630b, complete sequence 413417-413449 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013545 Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence 405040-405072 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013565 Rhizobium phaseoli strain N831 plasmid pRphaN831b, complete sequence 423075-423107 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013582 Rhizobium phaseoli strain N261 plasmid pRphaN261b, complete sequence 419446-419478 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013571 Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence 406208-406240 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP021126 Rhizobium sp. Kim5 plasmid pRetKim5b, complete sequence 474058-474090 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NC_010998 Rhizobium etli CIAT 652 plasmid pA, complete sequence 405681-405713 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP026519 Deinococcus sp. NW-56 plasmid unnamed3, complete sequence 67905-67937 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 MN543575 Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_fusion, complete sequence 238581-238613 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 MN543576 Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_vir, complete sequence 233250-233282 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP024517 Klebsiella pneumoniae strain KSB1_10J plasmid unnamed2, complete sequence 156092-156124 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP024497 Klebsiella pneumoniae strain KSB1_7E plasmid unnamed1, complete sequence 156092-156124 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP024501 Klebsiella pneumoniae strain KSB1_4E plasmid unnamed2, complete sequence 156092-156124 8 0.758
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP032356 Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_Vir, complete sequence 231215-231247 8 0.758
NC_019968_1 1.30|23026|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 23026-23058 33 NZ_CP013715 Staphylococcus equorum strain C2014 plasmid pC2014-1, complete sequence 41031-41063 8 0.758
NC_019968_1 1.36|23417|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR 23417-23450 34 NC_014310 Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence 1361324-1361357 8 0.765
NC_019968_1 1.36|23417|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR 23417-23450 34 NZ_CP022762 Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence 1226979-1227012 8 0.765
NC_019968_1 1.36|23417|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR 23417-23450 34 NZ_CP039340 Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence 1593399-1593432 8 0.765
NC_019968_1 1.36|23417|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR 23417-23450 34 NZ_CP039340 Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence 1598137-1598170 8 0.765
NC_019968_1 1.36|23417|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR 23417-23450 34 NZ_CP014703 Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence 1226076-1226109 8 0.765
NC_019968_1 1.36|23417|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR 23417-23450 34 NZ_CP022771 Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence 1226971-1227004 8 0.765
NC_019968_1 1.36|23417|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR 23417-23450 34 NZ_CP022777 Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence 1226326-1226359 8 0.765
NC_019968_1 1.36|23417|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR 23417-23450 34 NZ_CP022799 Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence 1226962-1226995 8 0.765
NC_019968_1 1.39|23615|32|NC_019968|CRISPRCasFinder,CRT 23615-23646 32 NZ_LR134456 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence 253196-253227 8 0.75
NC_019968_1 1.39|23615|32|NC_019968|CRISPRCasFinder,CRT 23615-23646 32 MT939492 Xanthomonas phage Xoo-sp14, complete genome 3988-4019 8 0.75
NC_019968_1 1.45|23680|33|NC_019968|PILER-CR 23680-23712 33 NZ_CP021915 Sagittula sp. P11 plasmid unnamed2, complete sequence 201780-201812 8 0.758
NC_019968_1 1.45|23680|33|NC_019968|PILER-CR 23680-23712 33 NZ_CP010856 Marinovum algicola DG 898 plasmid pMaD1, complete sequence 205335-205367 8 0.758
NC_019968_1 1.45|23680|33|NC_019968|PILER-CR 23680-23712 33 NZ_CP018081 Sulfitobacter sp. AM1-D1 plasmid unnamed5, complete sequence 61782-61814 8 0.758
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NZ_CP047177 Rathayibacter sp. VKM Ac-2759 plasmid unnamed1, complete sequence 114704-114730 8 0.704
NC_019968_1 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT 21401-21434 34 MK250021 Prevotella phage Lak-B2, complete genome 202174-202207 9 0.735
NC_019968_1 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT 21401-21434 34 MK250024 Prevotella phage Lak-B5, complete genome 196184-196217 9 0.735
NC_019968_1 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT 21401-21434 34 MK250028 Prevotella phage Lak-B9, complete genome 201067-201100 9 0.735
NC_019968_1 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT 21401-21434 34 MK250023 Prevotella phage Lak-B4, complete genome 202076-202109 9 0.735
NC_019968_1 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT 21401-21434 34 MK250025 Prevotella phage Lak-B6, complete genome 199377-199410 9 0.735
NC_019968_1 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT 21401-21434 34 MK250022 Prevotella phage Lak-B3, complete genome 199392-199425 9 0.735
NC_019968_1 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT 21401-21434 34 MK250027 Prevotella phage Lak-B8, complete genome 202287-202320 9 0.735
NC_019968_1 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT 21401-21434 34 MK250026 Prevotella phage Lak-B7, complete genome 201358-201391 9 0.735
NC_019968_1 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT 21401-21434 34 MK250020 Prevotella phage Lak-B1, complete genome 201047-201080 9 0.735
NC_019968_1 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT 21401-21434 34 NC_018684 Bacillus thuringiensis MC28 plasmid pMC8, complete sequence 5129-5162 9 0.735
NC_019968_1 1.6|21467|32|NC_019968|CRISPRCasFinder,CRT 21467-21498 32 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 416055-416086 9 0.719
NC_019968_1 1.6|21467|32|NC_019968|CRISPRCasFinder,CRT 21467-21498 32 NZ_CP016453 Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence 109232-109263 9 0.719
NC_019968_1 1.8|21597|33|NC_019968|CRISPRCasFinder,CRT 21597-21629 33 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 266668-266700 9 0.727
NC_019968_1 1.9|21662|32|NC_019968|CRISPRCasFinder,CRT 21662-21693 32 NC_019521 Sphingomonas phage PAU, complete genome 145496-145527 9 0.719
NC_019968_1 1.11|21790|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 21790-21821 32 CP011076 Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence 1263445-1263476 9 0.719
NC_019968_1 1.11|21790|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 21790-21821 32 NC_009904 Enterococcus phage phiEF24C, complete genome 15115-15146 9 0.719
NC_019968_1 1.11|21790|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 21790-21821 32 AP009390 Enterococcus phage phiEF24C DNA, complete genome 15115-15146 9 0.719
NC_019968_1 1.11|21790|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 21790-21821 32 AB609718 Enterococcus phage phiEF24C-P2 DNA, complete genome 15115-15146 9 0.719
NC_019968_1 1.14|21984|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 21984-22015 32 NC_017205 Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT72, complete sequence 67976-68007 9 0.719
NC_019968_1 1.14|21984|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 21984-22015 32 NC_018879 Bacillus thuringiensis Bt407 plasmid BTB_78p, complete sequence 65905-65936 9 0.719
NC_019968_1 1.14|21984|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 21984-22015 32 CP020758 Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-19, complete sequence 26421-26452 9 0.719
NC_019968_1 1.14|21984|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 21984-22015 32 NZ_CP010092 Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB126, complete sequence 93992-94023 9 0.719
NC_019968_1 1.14|21984|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 21984-22015 32 NZ_CP010093 Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB71, complete sequence 61887-61918 9 0.719
NC_019968_1 1.14|21984|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 21984-22015 32 NZ_CP021065 Bacillus thuringiensis strain ATCC 10792 plasmid poh4, complete sequence 49654-49685 9 0.719
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP021028 Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence 497812-497844 9 0.727
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013503 Rhizobium esperanzae strain N561 plasmid pRspN561c, complete sequence 492676-492708 9 0.727
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013509 Rhizobium sp. N1341 plasmid pRspN1341d, complete sequence 492676-492708 9 0.727
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013520 Rhizobium sp. N113 plasmid pRspN113c, complete sequence 492676-492708 9 0.727
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013493 Rhizobium sp. N6212 plasmid pRspN6212c, complete sequence 492676-492708 9 0.727
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 NZ_CP013516 Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence 498286-498318 9 0.727
NC_019968_1 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22766-22798 33 CP007642 Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803a, complete sequence 436784-436816 9 0.727
NC_019968_1 1.28|22895|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22895-22928 34 NZ_CP049244 Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence 873014-873047 9 0.735
NC_019968_1 1.28|22895|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22895-22928 34 NZ_CP017943 Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence 25713-25746 9 0.735
NC_019968_1 1.32|23157|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR 23157-23190 34 MN694365 Marine virus AFVG_250M715, complete genome 11066-11099 9 0.735
NC_019968_1 1.40|23679|34|NC_019968|CRISPRCasFinder,CRT 23679-23712 34 NZ_CP021915 Sagittula sp. P11 plasmid unnamed2, complete sequence 201779-201812 9 0.735
NC_019968_1 1.40|23679|34|NC_019968|CRISPRCasFinder,CRT 23679-23712 34 NZ_CP010856 Marinovum algicola DG 898 plasmid pMaD1, complete sequence 205334-205367 9 0.735
NC_019968_1 1.40|23679|34|NC_019968|CRISPRCasFinder,CRT 23679-23712 34 NZ_CP018081 Sulfitobacter sp. AM1-D1 plasmid unnamed5, complete sequence 61782-61815 9 0.735
NC_019968_1 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT 21401-21434 34 NZ_CP045297 Paenibacillus brasilensis strain KACC 13842 plasmid unnamed1, complete sequence 4612-4645 10 0.706
NC_019968_1 1.9|21662|32|NC_019968|CRISPRCasFinder,CRT 21662-21693 32 NZ_CP011156 Bacillus cereus strain HN001 plasmid pRML01, complete sequence 65342-65373 10 0.688
NC_019968_1 1.11|21790|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 21790-21821 32 MN693246 Marine virus AFVG_25M12, complete genome 34917-34948 10 0.688
NC_019968_1 1.24|22634|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22634-22667 34 CP031730 Stenotrophomonas rhizophila strain GA1 plasmid unnamed1, complete sequence 123742-123775 10 0.706
NC_019968_1 1.27|22831|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR 22831-22862 32 MN035054 Leviviridae sp. isolate H1_Bulk_29_scaffold_121 RNA-dependent RNA polymerase (H1Bulk29121_000001), hypothetical protein (H1Bulk29121_000002), hypothetical protein (H1Bulk29121_000003), and hypothetical protein (H1Bulk29121_000004) genes, complete cds 3964-3995 10 0.688
NC_019968_1 1.39|23615|32|NC_019968|CRISPRCasFinder,CRT 23615-23646 32 NZ_CP016283 Cryobacterium arcticum strain PAMC 27867 plasmid pP27867_1, complete sequence 28313-28344 10 0.688
NC_019968_1 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT 21401-21434 34 NC_021183 Clostridium pasteurianum BC1 plasmid pCLOPA01, complete sequence 51625-51658 11 0.676
NC_019968_4 4.3|848023|27|NC_019968|CRISPRCasFinder 848023-848049 27 NC_015314 Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence 12073-12099 11 0.593

1. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to MK882925 (Dinoroseobacter phage vB_DshS-R4C, complete genome) position: , mismatch: 4, identity: 0.852

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcggaccggcgcggagggcggcctcaa	Protospacer
****.************ *****.* *

2. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to MH669016 (Streptomyces phage TrvxScott, complete genome) position: , mismatch: 4, identity: 0.852

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcgcgccggcacggaggccggccgcaa	Protospacer
*** ******.************ * *

3. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to MK392363 (Streptomyces phage Bowden, complete genome) position: , mismatch: 4, identity: 0.852

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcgcgccggcacggaggccggccgcaa	Protospacer
*** ******.************ * *

4. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to MK460245 (Streptomyces phage BartholomewSD, complete genome) position: , mismatch: 4, identity: 0.852

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcgcgccggcacggaggccggccgcaa	Protospacer
*** ******.************ * *

5. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to MN234208 (Streptomyces phage Alvy, complete genome) position: , mismatch: 4, identity: 0.852

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcgcgccggcacggaggccggccgcaa	Protospacer
*** ******.************ * *

6. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP035423 (Leisingera sp. NJS204 plasmid unnamed6, complete sequence) position: , mismatch: 5, identity: 0.815

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcgggccgtcgcggaggccggccaaag	Protospacer
******** **************   .

7. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP011045 (Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid pCI2, complete sequence) position: , mismatch: 5, identity: 0.815

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcaggccggcacggaggccggccctac	Protospacer
**.*******.*************.  

8. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP021036 (Clavibacter michiganensis subsp. insidiosus strain R1-3 plasmid pCI2, complete sequence) position: , mismatch: 5, identity: 0.815

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcaggccggcacggaggccggccctac	Protospacer
**.*******.*************.  

9. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 5, identity: 0.815

gcgggccggcgcggaggccggccccta	CRISPR spacer
tcgggccggcccggaggccggccgcgt	Protospacer
 ********* ************ *  

10. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP047175 (Rathayibacter sp. VKM Ac-2760 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.815

gcgggccggcgcggaggccggccccta	CRISPR spacer
acgggccggcccgcaggccggcccgca	Protospacer
.********* ** ********** .*

11. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 5, identity: 0.815

gcgggccggcgcggaggccggccccta	CRISPR spacer
ccgggccgccgcggaggccggctacca	Protospacer
 ******* *************. *.*

12. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 5, identity: 0.815

gcgggccggcgcggaggccggccccta	CRISPR spacer
ccgggccgtcggggaggccggcccgtc	Protospacer
 ******* ** ************ * 

13. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 5, identity: 0.815

gcgggccggcgcggaggccggccccta	CRISPR spacer
ccgggccgccgcggaggccggctacca	Protospacer
 ******* *************. *.*

14. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to MT708548 (Streptomyces phage Salutena, complete genome) position: , mismatch: 5, identity: 0.815

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcgcgccggcacggaggccggccggaa	Protospacer
*** ******.************   *

15. spacer 1.2|21349|29|NC_019968|PILER-CR matches to MK765568 (Tortoise microvirus 18 isolate 18_SP_84, complete genome) position: , mismatch: 6, identity: 0.793

accgccataagaggcagcagaaagagcag	CRISPR spacer
aacaatgaaagaggcagcagaaagagcag	Protospacer
* *. .. *********************

16. spacer 1.44|21599|30|NC_019968|PILER-CR matches to JQ807251 (Environmental Halophage eHP-32, partial genome) position: , mismatch: 6, identity: 0.8

ttaaggacttgaccgacggggagcacgacg	CRISPR spacer
tcgacgacatgaccgacgcggagcacgaag	Protospacer
*..* *** ********* ********* *

17. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NC_010507 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD08, complete sequence) position: , mismatch: 6, identity: 0.778

gcgggccggcgcggaggccggccccta	CRISPR spacer
tcgggccggcccggaggccggccgacc	Protospacer
 ********* ************  . 

18. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 6, identity: 0.778

gcgggccggcgcggaggccggccccta	CRISPR spacer
gctggccggcgcggaggccggggcggt	Protospacer
** ******************  *   

19. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP047175 (Rathayibacter sp. VKM Ac-2760 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.778

gcgggccggcgcggaggccggccccta	CRISPR spacer
acgggccggcccgaaggccggccctcg	Protospacer
.********* **.**********...

20. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP003988 (Streptomyces sp. 769 plasmid pSGZL, complete sequence) position: , mismatch: 6, identity: 0.778

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcgggccgccgaggaggccggccttcg	Protospacer
******** ** ***********....

21. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 6, identity: 0.778

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcgcgccggcgcggcggccggccaacc	Protospacer
*** ********** ********  . 

22. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP040820 (Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence) position: , mismatch: 6, identity: 0.778

gcgggccggcgcggaggccggccccta	CRISPR spacer
ccgggcctgcgcggaggccggcatcgc	Protospacer
 ****** ************** .*  

23. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP047184 (Rathayibacter sp. VKM Ac-2801 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgggccggcgcggaggccggccccta	CRISPR spacer
cgtggccggcccgaaggccggcccctc	Protospacer
   ******* **.************ 

24. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP047177 (Rathayibacter sp. VKM Ac-2759 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgggccggcgcggaggccggccccta	CRISPR spacer
cgtggccggcccgaaggccggcccctc	Protospacer
   ******* **.************ 

25. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP039699 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK234, complete sequence) position: , mismatch: 6, identity: 0.778

gcgggccggcgcggaggccggccccta	CRISPR spacer
cggggccggcgcgggggccggccgccc	Protospacer
  ************.******** *. 

26. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP047181 (Rathayibacter festucae strain VKM Ac-2802 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgggccggcgcggaggccggccccta	CRISPR spacer
cgtggccggcccgaaggccggcccctc	Protospacer
   ******* **.************ 

27. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NC_021909 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence) position: , mismatch: 6, identity: 0.778

gcgggccggcgcggaggccggccccta	CRISPR spacer
tcgagccggcgcggaagccggcccgag	Protospacer
 **.***********.********  .

28. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 6, identity: 0.778

gcgggccggcgcggaggccggccccta	CRISPR spacer
cggggccggcgcggaggccggaacgga	Protospacer
  *******************  *  *

29. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcgggccggcgcggcggccggtgcggc	Protospacer
************** ******. *   

30. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to MF766045 (Streptomyces phage Daudau, complete genome) position: , mismatch: 6, identity: 0.778

gcgggccggcgcggaggccggccccta	CRISPR spacer
gcggaccggcacggaggccggccggac	Protospacer
****.*****.************    

31. spacer 1.30|23026|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to MK448761 (Streptococcus phage Javan445, complete genome) position: , mismatch: 7, identity: 0.788

acagtatttaaaagaaaaacatgtccaagttaa	CRISPR spacer
agataaattaaaagaaaaaaatgaccaagttat	Protospacer
* *  * ************ *** ******** 

32. spacer 1.30|23026|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to MK448760 (Streptococcus phage Javan443, complete genome) position: , mismatch: 7, identity: 0.788

acagtatttaaaagaaaaacatgtccaagttaa	CRISPR spacer
agataaattaaaagaaaaaaatgaccaagttat	Protospacer
* *  * ************ *** ******** 

33. spacer 1.44|21599|30|NC_019968|PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.767

ttaaggacttgaccgacggggagcacgacg	CRISPR spacer
aaaagggcttgaccgacggggaacactaac	Protospacer
  ****.***************.*** *  

34. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_AP014811 (Methylorubrum populi strain P-1M plasmid pMPPM02, complete sequence) position: , mismatch: 7, identity: 0.741

gcgggccggcgcggaggccggccccta	CRISPR spacer
ccgggccggcgcggaagccggcagacg	Protospacer
 **************.******   ..

35. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP029174 (Methylobacterium sp. DM1 plasmid pLVM1, complete sequence) position: , mismatch: 7, identity: 0.741

gcgggccggcgcggaggccggccccta	CRISPR spacer
ccgggccggcgcggaagccggcagaag	Protospacer
 **************.******    .

36. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP029174 (Methylobacterium sp. DM1 plasmid pLVM1, complete sequence) position: , mismatch: 7, identity: 0.741

gcgggccggcgcggaggccggccccta	CRISPR spacer
ccgggccggcgcggaagccggcagaag	Protospacer
 **************.******    .

37. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP029174 (Methylobacterium sp. DM1 plasmid pLVM1, complete sequence) position: , mismatch: 7, identity: 0.741

gcgggccggcgcggaggccggccccta	CRISPR spacer
ccgggccggcgcggaagccggcagaag	Protospacer
 **************.******    .

38. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 7, identity: 0.741

gcgggccggcgcggaggccggccccta	CRISPR spacer
ttatgccggcgcggtggccggccccgg	Protospacer
 .. ********** ********** .

39. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP047184 (Rathayibacter sp. VKM Ac-2801 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

-gcgggccggcgcggaggccggccccta	CRISPR spacer
cgagggccggcccccgggccggcccgt-	Protospacer
 * ******** *  .********* * 

40. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP047177 (Rathayibacter sp. VKM Ac-2759 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.741

-gcgggccggcgcggaggccggccccta	CRISPR spacer
cgagggccggcccccgggccggcccgt-	Protospacer
 * ******** *  .********* * 

41. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP047181 (Rathayibacter festucae strain VKM Ac-2802 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.741

-gcgggccggcgcggaggccggccccta	CRISPR spacer
cgagggccggcccccgggccggcccgt-	Protospacer
 * ******** *  .********* * 

42. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP047174 (Rathayibacter sp. VKM Ac-2760 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.741

-gcgggccggcgcggaggccggccccta	CRISPR spacer
gacgggccggcctgcgggccggcccgt-	Protospacer
 .********* .* .********* * 

43. spacer 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT matches to NZ_MK715471 (Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence) position: , mismatch: 8, identity: 0.765

atttagcaattaaaaatgtaaagaattatggcaa	CRISPR spacer
atttagcaattaaaaatatagagaaaaaagatta	Protospacer
*****************.**.****  * *.. *

44. spacer 1.11|21790|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

aatccataatcgtcttgatattttacgtttgg	CRISPR spacer
cagatataatcgtcttcatatttaacgtttaa	Protospacer
 *  .*********** ****** ******..

45. spacer 1.14|21984|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040675 (Exiguobacterium mexicanum strain A-EM plasmid punnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ctaagtgtaaaaaaattggaggagatattaaa	CRISPR spacer
tcacttccaaacaaattggagaagatattaaa	Protospacer
..*  * .*** *********.**********

46. spacer 1.14|21984|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to HQ141410 (Lactobacillus phage LF1, complete genome) position: , mismatch: 8, identity: 0.75

ctaagtgtaaaaaaattggaggagatattaaa	CRISPR spacer
agacgaattaaaacattggaggagaaattaaa	Protospacer
  * * .* **** *********** ******

47. spacer 1.19|22310|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to KX898399 (Pseudomonas phage JG012, complete genome) position: , mismatch: 8, identity: 0.75

caaggaactgccaatacttttgaatcgcctgg	CRISPR spacer
tcaggaactgccgatacttctgaatctcgcgc	Protospacer
. **********.******.****** * .* 

48. spacer 1.19|22310|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NC_031058 (Pseudomonas phage NP1, complete genome) position: , mismatch: 8, identity: 0.75

caaggaactgccaatacttttgaatcgcctgg	CRISPR spacer
tcaggaactgccgatacttctgaatctcgcgc	Protospacer
. **********.******.****** * .* 

49. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020899 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

50. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048109 (Klebsiella michiganensis strain BD177 plasmid unnamed1) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
acaacatgcagcagcagcagcgcagcactaaag	Protospacer
. *******.* ***************.. *.*

51. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031818 (Klebsiella pneumoniae strain INF235-sc-2280127 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
acaacatgcagcagcagcagcgcagcactaaag	Protospacer
. *******.* ***************.. *.*

52. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006989 (Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

53. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013525 (Rhizobium phaseoli strain R744 plasmid pRphaR744c, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

54. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013554 (Rhizobium phaseoli strain N931 plasmid pRphaN931b, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

55. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013588 (Rhizobium phaseoli strain N161 plasmid pRphaN161c, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

56. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013560 (Rhizobium phaseoli strain N841 plasmid pRphaN841c, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

57. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013577 (Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

58. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013549 (Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

59. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013529 (Rhizobium phaseoli strain R723 plasmid pRphaR723b, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

60. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013534 (Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

61. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013539 (Rhizobium phaseoli strain R630 plasmid pRphaR630b, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

62. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013545 (Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

63. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013565 (Rhizobium phaseoli strain N831 plasmid pRphaN831b, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

64. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013582 (Rhizobium phaseoli strain N261 plasmid pRphaN261b, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

65. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013571 (Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

66. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021126 (Rhizobium sp. Kim5 plasmid pRetKim5b, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

67. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NC_010998 (Rhizobium etli CIAT 652 plasmid pA, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcatcatgcggaagcggcagcgcagcatcacta	Protospacer
* * *******.***.*************   .

68. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026519 (Deinococcus sp. NW-56 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
aggtcatgcgggagcagcagcgcaccttcgaac	Protospacer
.*. ******************** * ** *. 

69. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to MN543575 (Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_fusion, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
acaacatgcagcagcagcagcgcagcactaaag	Protospacer
. *******.* ***************.. *.*

70. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to MN543576 (Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_vir, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
acaacatgcagcagcagcagcgcagcactaaag	Protospacer
. *******.* ***************.. *.*

71. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024517 (Klebsiella pneumoniae strain KSB1_10J plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
acaacatgcagcagcagcagcgcagcactaaag	Protospacer
. *******.* ***************.. *.*

72. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024497 (Klebsiella pneumoniae strain KSB1_7E plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
acaacatgcagcagcagcagcgcagcactaaag	Protospacer
. *******.* ***************.. *.*

73. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024501 (Klebsiella pneumoniae strain KSB1_4E plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
acaacatgcagcagcagcagcgcagcactaaag	Protospacer
. *******.* ***************.. *.*

74. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032356 (Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_Vir, complete sequence) position: , mismatch: 8, identity: 0.758

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
acaacatgcagcagcagcagcgcagcactaaag	Protospacer
. *******.* ***************.. *.*

75. spacer 1.30|23026|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013715 (Staphylococcus equorum strain C2014 plasmid pC2014-1, complete sequence) position: , mismatch: 8, identity: 0.758

acagtatttaaaagaaaaacatgtccaagttaa	CRISPR spacer
caattatttaaaagaaaaagaagtccaattaat	Protospacer
  * *************** * ****** * * 

76. spacer 1.36|23417|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 8, identity: 0.765

ttgaactgatgcgactcgtccacg-aaaatgtggt	CRISPR spacer
ttgaactggtgcgcctcgtccacgtcgcgcgtgg-	Protospacer
********.**** **********  . ..**** 

77. spacer 1.36|23417|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ttgaactgatgcgactcgtccacg-aaaatgtggt	CRISPR spacer
ttgaactggtgcgcctcgtccacgtcgcgcgtgg-	Protospacer
********.**** **********  . ..**** 

78. spacer 1.36|23417|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 8, identity: 0.765

ttgaactgatgcgactcgtccacg-aaaatgtggt	CRISPR spacer
ttgaactggtgcgcctcgtccacgtcgcgcgtgg-	Protospacer
********.**** **********  . ..**** 

79. spacer 1.36|23417|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 8, identity: 0.765

ttgaactgatgcgactcgtccacg-aaaatgtggt	CRISPR spacer
ttgaactggtgcgcctcgtccacgtcgcgcgtgg-	Protospacer
********.**** **********  . ..**** 

80. spacer 1.36|23417|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 8, identity: 0.765

ttgaactgatgcgactcgtccacg-aaaatgtggt	CRISPR spacer
ttgaactggtgcgcctcgtccacgtcgcgcgtgg-	Protospacer
********.**** **********  . ..**** 

81. spacer 1.36|23417|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ttgaactgatgcgactcgtccacg-aaaatgtggt	CRISPR spacer
ttgaactggtgcgcctcgtccacgtcgcgcgtgg-	Protospacer
********.**** **********  . ..**** 

82. spacer 1.36|23417|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ttgaactgatgcgactcgtccacg-aaaatgtggt	CRISPR spacer
ttgaactggtgcgcctcgtccacgtcgcgcgtgg-	Protospacer
********.**** **********  . ..**** 

83. spacer 1.36|23417|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ttgaactgatgcgactcgtccacg-aaaatgtggt	CRISPR spacer
ttgaactggtgcgcctcgtccacgtcgcgcgtgg-	Protospacer
********.**** **********  . ..**** 

84. spacer 1.39|23615|32|NC_019968|CRISPRCasFinder,CRT matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 8, identity: 0.75

---tcaaggatggtggtcgtgaacaccgtcatgga	CRISPR spacer
ggttc---gatcgtggtggtgaacaccgtcaacta	Protospacer
   **   *** ***** *************   *

85. spacer 1.39|23615|32|NC_019968|CRISPRCasFinder,CRT matches to MT939492 (Xanthomonas phage Xoo-sp14, complete genome) position: , mismatch: 8, identity: 0.75

tcaagga---tggtggtcgtgaacaccgtcatgga	CRISPR spacer
---aagacctcggtggtcgtcaacaacgtcatggc	Protospacer
   *.**   .********* **** ******** 

86. spacer 1.45|23680|33|NC_019968|PILER-CR matches to NZ_CP021915 (Sagittula sp. P11 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

----ttgatgacattgtggtccacgccggcacccagc	CRISPR spacer
gggtctgac----ttgaggtccacgccgtcacccagc	Protospacer
    .***.    *** *********** ********

87. spacer 1.45|23680|33|NC_019968|PILER-CR matches to NZ_CP010856 (Marinovum algicola DG 898 plasmid pMaD1, complete sequence) position: , mismatch: 8, identity: 0.758

----ttgatgacattgtggtccacgccggcacccagc	CRISPR spacer
gggtctgac----ttgaggtccacgccgtcacccagc	Protospacer
    .***.    *** *********** ********

88. spacer 1.45|23680|33|NC_019968|PILER-CR matches to NZ_CP018081 (Sulfitobacter sp. AM1-D1 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.758

----ttgatgacattgtggtccacgccggcacccagc	CRISPR spacer
gggtctgac----ttgaggtccacgccgtcacccagc	Protospacer
    .***.    *** *********** ********

89. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NZ_CP047177 (Rathayibacter sp. VKM Ac-2759 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.704

-gcgggccggcgcggaggccggccccta	CRISPR spacer
ggagggccggcttccgggccggcccgt-	Protospacer
 * ******** .  .********* * 

90. spacer 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 9, identity: 0.735

atttagcaattaaaaatgtaaagaattatggcaa	CRISPR spacer
tataaacaattaaaaatataaagaattatgatgt	Protospacer
  * *.***********.************... 

91. spacer 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT matches to MK250024 (Prevotella phage Lak-B5, complete genome) position: , mismatch: 9, identity: 0.735

atttagcaattaaaaatgtaaagaattatggcaa	CRISPR spacer
tataaacaattaaaaatataaagaattatgatgt	Protospacer
  * *.***********.************... 

92. spacer 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 9, identity: 0.735

atttagcaattaaaaatgtaaagaattatggcaa	CRISPR spacer
tataaacaattaaaaatataaagaattatgatgt	Protospacer
  * *.***********.************... 

93. spacer 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 9, identity: 0.735

atttagcaattaaaaatgtaaagaattatggcaa	CRISPR spacer
tataaacaattaaaaatataaagaattatgatgt	Protospacer
  * *.***********.************... 

94. spacer 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 9, identity: 0.735

atttagcaattaaaaatgtaaagaattatggcaa	CRISPR spacer
tataaacaattaaaaatataaagaattatgatgt	Protospacer
  * *.***********.************... 

95. spacer 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 9, identity: 0.735

atttagcaattaaaaatgtaaagaattatggcaa	CRISPR spacer
tataaacaattaaaaatataaagaattatgatgt	Protospacer
  * *.***********.************... 

96. spacer 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 9, identity: 0.735

atttagcaattaaaaatgtaaagaattatggcaa	CRISPR spacer
tataaacaattaaaaatataaagaattatgatgt	Protospacer
  * *.***********.************... 

97. spacer 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 9, identity: 0.735

atttagcaattaaaaatgtaaagaattatggcaa	CRISPR spacer
tataaacaattaaaaatataaagaattatgatgt	Protospacer
  * *.***********.************... 

98. spacer 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 9, identity: 0.735

atttagcaattaaaaatgtaaagaattatggcaa	CRISPR spacer
tataaacaattaaaaatataaagaattatgatgt	Protospacer
  * *.***********.************... 

99. spacer 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT matches to NC_018684 (Bacillus thuringiensis MC28 plasmid pMC8, complete sequence) position: , mismatch: 9, identity: 0.735

atttagcaattaaaaatgtaaagaattatggcaa	CRISPR spacer
atttagcaattaaaaaaggaaagattgaagaagg	Protospacer
**************** * ***** * * *. ..

100. spacer 1.6|21467|32|NC_019968|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 9, identity: 0.719

ccctcaaaggaggatgcgaaggcctatgctaa	CRISPR spacer
acctcaaaggagaaggcgaaggccttcaccgg	Protospacer
 ***********.* ********** ..*...

101. spacer 1.6|21467|32|NC_019968|CRISPRCasFinder,CRT matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 9, identity: 0.719

ccctcaaaggaggatgcgaaggcctatgctaa	CRISPR spacer
gtcgcgttcgaggatgcggaggcctatgcaaa	Protospacer
 .* *.   *********.********** **

102. spacer 1.8|21597|33|NC_019968|CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.727

cgttaaggacttgaccgacggggagcacgacgc	CRISPR spacer
gcaaaagggcttgaccgacggggaacactaacc	Protospacer
    ****.***************.*** *  *

103. spacer 1.9|21662|32|NC_019968|CRISPRCasFinder,CRT matches to NC_019521 (Sphingomonas phage PAU, complete genome) position: , mismatch: 9, identity: 0.719

tttttttgaaagatttgtcaaatctttttgcg	CRISPR spacer
aagctttgaacgatttgtcaaatcgtttaaca	Protospacer
   .****** ************* *** .*.

104. spacer 1.11|21790|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

aatccataatcgtcttgatattttacgtttgg	CRISPR spacer
gatacataatcgacttgatattttttgcatta	Protospacer
.** ******** *********** .*. * .

105. spacer 1.11|21790|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NC_009904 (Enterococcus phage phiEF24C, complete genome) position: , mismatch: 9, identity: 0.719

aatccataatcgtcttgatattttacgtttgg	CRISPR spacer
atcgtataatcgtcttgacatgttacgtgttt	Protospacer
* . .*************.** ****** *  

106. spacer 1.11|21790|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to AP009390 (Enterococcus phage phiEF24C DNA, complete genome) position: , mismatch: 9, identity: 0.719

aatccataatcgtcttgatattttacgtttgg	CRISPR spacer
atcgtataatcgtcttgacatgttacgtgttt	Protospacer
* . .*************.** ****** *  

107. spacer 1.11|21790|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to AB609718 (Enterococcus phage phiEF24C-P2 DNA, complete genome) position: , mismatch: 9, identity: 0.719

aatccataatcgtcttgatattttacgtttgg	CRISPR spacer
atcgtataatcgtcttgacatgttacgtgttt	Protospacer
* . .*************.** ****** *  

108. spacer 1.14|21984|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NC_017205 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT72, complete sequence) position: , mismatch: 9, identity: 0.719

ctaagtgtaaaaaaattggaggagatattaaa	CRISPR spacer
tagggtgtaaaaaaaatggaggtgataacata	Protospacer
. ..*********** ****** **** .* *

109. spacer 1.14|21984|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NC_018879 (Bacillus thuringiensis Bt407 plasmid BTB_78p, complete sequence) position: , mismatch: 9, identity: 0.719

ctaagtgtaaaaaaattggaggagatattaaa	CRISPR spacer
tagggtgtaaaaaaaatggaggtgataacata	Protospacer
. ..*********** ****** **** .* *

110. spacer 1.14|21984|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to CP020758 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-19, complete sequence) position: , mismatch: 9, identity: 0.719

ctaagtgtaaaaaaattggaggagatattaaa	CRISPR spacer
tagggtgtaaaaaaaatggaggtgataacata	Protospacer
. ..*********** ****** **** .* *

111. spacer 1.14|21984|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010092 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB126, complete sequence) position: , mismatch: 9, identity: 0.719

ctaagtgtaaaaaaattggaggagatattaaa	CRISPR spacer
tagggtgtaaaaaaaatggaggtgataacata	Protospacer
. ..*********** ****** **** .* *

112. spacer 1.14|21984|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010093 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB71, complete sequence) position: , mismatch: 9, identity: 0.719

ctaagtgtaaaaaaattggaggagatattaaa	CRISPR spacer
tagggtgtaaaaaaaatggaggtgataacata	Protospacer
. ..*********** ****** **** .* *

113. spacer 1.14|21984|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021065 (Bacillus thuringiensis strain ATCC 10792 plasmid poh4, complete sequence) position: , mismatch: 9, identity: 0.719

ctaagtgtaaaaaaattggaggagatattaaa	CRISPR spacer
tagggtgtaaaaaaaatggaggtgataacata	Protospacer
. ..*********** ****** **** .* *

114. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021028 (Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence) position: , mismatch: 9, identity: 0.727

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcattatgcggaagcggcagcgcagcatcacta	Protospacer
* * .******.***.*************   .

115. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013503 (Rhizobium esperanzae strain N561 plasmid pRspN561c, complete sequence) position: , mismatch: 9, identity: 0.727

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcattatgcggaagcggcagcgcagcatcacta	Protospacer
* * .******.***.*************   .

116. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013509 (Rhizobium sp. N1341 plasmid pRspN1341d, complete sequence) position: , mismatch: 9, identity: 0.727

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcattatgcggaagcggcagcgcagcatcacta	Protospacer
* * .******.***.*************   .

117. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013520 (Rhizobium sp. N113 plasmid pRspN113c, complete sequence) position: , mismatch: 9, identity: 0.727

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcattatgcggaagcggcagcgcagcatcacta	Protospacer
* * .******.***.*************   .

118. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013493 (Rhizobium sp. N6212 plasmid pRspN6212c, complete sequence) position: , mismatch: 9, identity: 0.727

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcattatgcggaagcggcagcgcagcatcacta	Protospacer
* * .******.***.*************   .

119. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013516 (Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence) position: , mismatch: 9, identity: 0.727

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcattatgcggaagcggcagcgcagcatcacta	Protospacer
* * .******.***.*************   .

120. spacer 1.26|22766|33|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to CP007642 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803a, complete sequence) position: , mismatch: 9, identity: 0.727

ggaacatgcgggagcagcagcgcagcatccagg	CRISPR spacer
gcattatgcggaagcggcagcgcagcatcacta	Protospacer
* * .******.***.*************   .

121. spacer 1.28|22895|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.735

tgccgcatcttacggtggtggaaatgtctatccg	CRISPR spacer
tgccgcatctgtcggtggtggaaaacgtcatgct	Protospacer
**********  ************   ..** * 

122. spacer 1.28|22895|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017943 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

tgccgcatcttacggtggtggaaatgtctatccg	CRISPR spacer
tgccgcatctgacggtggcggaaaacatcgtcct	Protospacer
********** *******.*****   ...*** 

123. spacer 1.32|23157|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to MN694365 (Marine virus AFVG_250M715, complete genome) position: , mismatch: 9, identity: 0.735

tggaagctactcataacatcagcagcaccttgag	CRISPR spacer
cggaagctactcttaacttcagcaggggcggaag	Protospacer
.*********** **** ******* . *  .**

124. spacer 1.40|23679|34|NC_019968|CRISPRCasFinder,CRT matches to NZ_CP021915 (Sagittula sp. P11 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

----cttgatgacattgtggtccacgccggcacccagc	CRISPR spacer
cgggtctgac----ttgaggtccacgccgtcacccagc	Protospacer
    ..***.    *** *********** ********

125. spacer 1.40|23679|34|NC_019968|CRISPRCasFinder,CRT matches to NZ_CP010856 (Marinovum algicola DG 898 plasmid pMaD1, complete sequence) position: , mismatch: 9, identity: 0.735

----cttgatgacattgtggtccacgccggcacccagc	CRISPR spacer
cgggtctgac----ttgaggtccacgccgtcacccagc	Protospacer
    ..***.    *** *********** ********

126. spacer 1.40|23679|34|NC_019968|CRISPRCasFinder,CRT matches to NZ_CP018081 (Sulfitobacter sp. AM1-D1 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.735

----cttgatgacattgtggtccacgccggcacccagc	CRISPR spacer
cgggtctgac----ttgaggtccacgccgtcacccagc	Protospacer
    ..***.    *** *********** ********

127. spacer 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT matches to NZ_CP045297 (Paenibacillus brasilensis strain KACC 13842 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

atttagcaatt----aaaaatgtaaagaattatggcaa	CRISPR spacer
----ggcagctcataaaaaatgtaaagaaatatggctt	Protospacer
    .***..*    ************** ******  

128. spacer 1.9|21662|32|NC_019968|CRISPRCasFinder,CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 10, identity: 0.688

tttttttgaaagatttgtcaaatctttttgcg	CRISPR spacer
ttttcttgaaagatttgtaaaatcacaccatt	Protospacer
****.************* ***** . .... 

129. spacer 1.11|21790|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to MN693246 (Marine virus AFVG_25M12, complete genome) position: , mismatch: 10, identity: 0.688

aatccataatcgtcttgatattttacgtttgg	CRISPR spacer
gcttttctatcatcttgatattttacttttgc	Protospacer
. *.. . ***.************** **** 

130. spacer 1.24|22634|34|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to CP031730 (Stenotrophomonas rhizophila strain GA1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

cacaaatactggccatctacaacaagttgctaaa	CRISPR spacer
aacaaatattggccatcgacaacaaatgatgtag	Protospacer
 *******.******** *******.* ..  *.

131. spacer 1.27|22831|32|NC_019968|CRISPRCasFinder,CRT,PILER-CR matches to MN035054 (Leviviridae sp. isolate H1_Bulk_29_scaffold_121 RNA-dependent RNA polymerase (H1Bulk29121_000001), hypothetical protein (H1Bulk29121_000002), hypothetical protein (H1Bulk29121_000003), and hypothetical protein (H1Bulk29121_000004) genes, complete cds) position: , mismatch: 10, identity: 0.688

cgttaacgccaatgcactaacacccaacggat	CRISPR spacer
tctaccaaccaatgcactaagacctaacggag	Protospacer
. *    .************ ***.****** 

132. spacer 1.39|23615|32|NC_019968|CRISPRCasFinder,CRT matches to NZ_CP016283 (Cryobacterium arcticum strain PAMC 27867 plasmid pP27867_1, complete sequence) position: , mismatch: 10, identity: 0.688

tcaaggatggtggtcgtgaacaccgtcatgga	CRISPR spacer
acggccatggtgatcgtcaacaccgtcatcct	Protospacer
 *..  ******.**** ***********   

133. spacer 1.5|21401|34|NC_019968|CRISPRCasFinder,CRT matches to NC_021183 (Clostridium pasteurianum BC1 plasmid pCLOPA01, complete sequence) position: , mismatch: 11, identity: 0.676

atttagcaattaaaaatgtaaagaattatggcaa	CRISPR spacer
gtataggaattaaaaatgtaaagtattgccaagt	Protospacer
.* *** **************** ***.. . . 

134. spacer 4.3|848023|27|NC_019968|CRISPRCasFinder matches to NC_015314 (Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence) position: , mismatch: 11, identity: 0.593

-----gcgggccggcgcggaggccggccccta	CRISPR spacer
gtgaggccggcgtccgcggcggcccgc-----	Protospacer
     ** ***   ***** **** **     

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1094405 : 1134685 40 unidentified_phage(33.33%) integrase,transposase attL 1115020:1115033|attR 1134908:1134921
DBSCAN-SWA_2 1223858 : 1325474 106 unidentified_phage(23.53%) integrase,tail,capsid,terminase attL 1241405:1241464|attR 1334940:1334954
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Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NC_019968.1|WP_005847787.1|1256673_1257090_+|hypothetical-protein 1256673_1257090_+ 138 aa aa 40 NA NA 1223858-1325474 NA
2. NC_019960
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_019960_1 53554-53670 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_019960_2 531130-531246 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_019960_3 546965-547059 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_019960_4 1340325-1340741 Orphan NA
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_019960_5 1707862-1708002 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_019960_1 1.1|53583|59|NC_019960|CRISPRCasFinder 53583-53641 59 NC_019960.1 53627-53685 2 0.966

1. spacer 1.1|53583|59|NC_019960|CRISPRCasFinder matches to position: 53627-53685, mismatch: 2, identity: 0.966

tctttcctcacgcaaagccgcagagtctttggagtttccttttttctttcctcacgcag	CRISPR spacer
tctttcctcacgcagagctgcagagtctttggagtttccttttttctttcctcacgcag	Protospacer
**************.***.****************************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1627376 : 1703961 60 Bacillus_phage(20.0%) portal,head,capsid,tail,protease,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage