CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_017098	Spirochaeta africana DSM 8902, complete sequence	3 crisprs	WYL,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DinG,cas3,DEDDh,RT,csa3	1	25	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_017098_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017098_1

168831-168909

Orphan

Consensus_repeat	Method
CCATCGGTTGCCAGCAGCTGCGCCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_017098_1

>merge|NC_017098|1|168831-168909|CRISPRCasFinder
CCATCGGTTGCCAGCAGCTGCGCCCAGCCGTCGCTGGCGGCCACTGACCGCGACCATCGGTTGCCAGCAGCTGCGTCCA

>NC_017098|1|1|168831-168909|CRISPRCasFinder
CCATCGGTTGCCAGCAGCTGCGCCCA	GCCGTCGCTGGCGGCCACTGACCGCGA
CCATCGGTTGCCAGCAGCTGCGTCCA

Protein	Signature genes	Signature genes Name	Protein_function
NC_017098.1\|WP_014454242.1\|163776_165822_+\|alpha-glucosidase	unknown	unknown	gnl\|CDD\|236691
NC_017098.1\|WP_014454250.1\|173959_175051_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|378359
NC_017098.1\|WP_169313591.1\|177378_178806_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223910
NC_017098.1\|WP_014454244.1\|166670_167291_+\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
NC_017098.1\|WP_014454255.1\|179116_181162_+\|chemotaxis-protein-CheA	unknown	unknown	gnl\|CDD\|223716
NC_017098.1\|WP_014454248.1\|171991_173041_-\|cytochrome-c-biogenesis-protein-CcsA	unknown	unknown	gnl\|CDD\|274447
NC_017098.1\|WP_014454239.1\|159598_161062_+\|DASS-family-sodium-coupled-anion-symporter	unknown	unknown	gnl\|CDD\|273267
NC_017098.1\|WP_014454241.1\|161882_163790_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225121
NC_017098.1\|WP_041396887.1\|175689_176556_+\|LuxR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715
NC_017098.1\|WP_014454247.1\|170364_171972_-\|DUF3365-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NC_017098.1\|WP_156809921.1\|169000_170305_+\|hypothetical-protein	unknown	unknown	unknown
NC_017098.1\|WP_014454254.1\|178806_179112_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|379202
NC_017098.1\|WP_014454240.1\|161089_161824_+\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NC_017098.1\|WP_014454238.1\|158720_159602_+\|CoA-binding-protein	unknown	unknown	gnl\|CDD\|180194
NC_017098.1\|WP_014454249.1\|173037_173943_-\|cytochrome-c-biogenesis-protein-ResB	unknown	unknown	gnl\|CDD\|377471
NC_017098.1\|WP_014454237.1\|157494_158721_+\|succinyl-CoA-synthetase-subunit-beta	unknown	unknown	gnl\|CDD\|234813
NC_017098.1\|WP_014454236.1\|156065_157475_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143440
NC_017098.1\|WP_014454243.1\|165818_166544_+\|DUF4867-family-protein	unknown	unknown	gnl\|CDD\|379783
NC_017098.1\|WP_014454251.1\|175119_175677_+\|hypothetical-protein	unknown	unknown	unknown
NC_017098.1\|WP_014454245.1\|167360_168749_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|369468

Protein	Function_ID	Function_description	E-value
NC_017098.1\|WP_014454242.1\|163776_165822_+\|alpha-glucosidase	gnl\|CDD\|236691	PRK10426, PRK10426, alpha-glucosidase; Provisional.	0
NC_017098.1\|WP_014454250.1\|173959_175051_+\|aminopeptidase	gnl\|CDD\|378359	pfam10023, Aminopep, Putative aminopeptidase. This family of bacterial proteins has a conserved HEXXH motif, suggesting that members are putative peptidases of zincin fold.	8.79388e-80
NC_017098.1\|WP_014454244.1\|166670_167291_+\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	1.96904e-86
NC_017098.1\|WP_014454255.1\|179116_181162_+\|chemotaxis-protein-CheA	gnl\|CDD\|223716	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms].	2.2859e-173
NC_017098.1\|WP_014454248.1\|171991_173041_-\|cytochrome-c-biogenesis-protein-CcsA	gnl\|CDD\|274447	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB. Members of this protein family represent one of two essential proteins of system II for c-type cytochrome biogenesis. Additional proteins tend to be part of the system but can be replaced by chemical reductants such as dithiothreitol. This protein is designated CcsB in Bordetella pertussis and some other bacteria, resC in Bacillus (where there is additional N-terminal sequence), and CcsA in chloroplast. We use the CcsB designation here. Member sequences show regions of strong sequence conservation and variable-length, poorly conserved regions in between; sparsely filled columns were removed from the seed alignment prior to model construction. [Energy metabolism, Electron transport, Protein fate, Protein modification and repair].	2.98955e-32
NC_017098.1\|WP_014454239.1\|159598_161062_+\|DASS-family-sodium-coupled-anion-symporter	gnl\|CDD\|273267	TIGR00785, Uncharacterized_transporter_HI_0020, anion transporter. The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds].	8.67403e-57
NC_017098.1\|WP_014454247.1\|170364_171972_-\|DUF3365-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	1.25925e-56
NC_017098.1\|WP_041396887.1\|175689_176556_+\|LuxR-family-transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	4.79521e-08
NC_017098.1\|WP_014454241.1\|161882_163790_+\|MFS-transporter	gnl\|CDD\|225121	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism].	8.54923e-44
NC_017098.1\|WP_014454254.1\|178806_179112_+\|STAS-domain-containing-protein	gnl\|CDD\|379202	pfam13466, STAS_2, STAS domain. The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.	7.81167e-08
NC_017098.1\|WP_014454240.1\|161089_161824_+\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	6.07179e-08
NC_017098.1\|WP_014454238.1\|158720_159602_+\|CoA-binding-protein	gnl\|CDD\|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	3.75872e-118
NC_017098.1\|WP_014454249.1\|173037_173943_-\|cytochrome-c-biogenesis-protein-ResB	gnl\|CDD\|377471	pfam05140, ResB, ResB-like family. This family includes both ResB and cytochrome c biogenesis proteins. Mutations in ResB indicate that they are essential for growth. ResB is predicted to be a transmembrane protein.	2.56365e-07
NC_017098.1\|WP_014454237.1\|157494_158721_+\|succinyl-CoA-synthetase-subunit-beta	gnl\|CDD\|234813	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta.	2.02221e-108
NC_017098.1\|WP_014454236.1\|156065_157475_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143440	cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.	0
NC_017098.1\|WP_014454243.1\|165818_166544_+\|DUF4867-family-protein	gnl\|CDD\|379783	pfam16161, DUF4867, Domain of unknown function (DUF4867). This family consists of uncharacterized proteins around 220 residues in length and is mainly found in various human gut Firmicutes and a few eubacteria species. It is also amply represented in human gut metagenomic datasets. Distant homology analysis and marginal HMM overlaps suggest this family is a distant homolog of Ureidoglycolate hydrolase pfam04115, but this prediction is not verified by experiment, therefore the function of this family is still unknown.	3.38594e-98
NC_017098.1\|WP_169313591.1\|177378_178806_+\|HAMP-domain-containing-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.9156e-49
NC_017098.1\|WP_014454245.1\|167360_168749_+\|MFS-transporter	gnl\|CDD\|369468	pfam07690, MFS_1, Major Facilitator Superfamily.	8.1922e-06

>NC_017098.1|WP_014454245.1|167360_168749_+|MFS-transporter
MSGNQKTIGTENSFAHGVTPLAPRERSRGINAYLQHAVWNGLGINLLNVNIISLLAIAYGATNLQLGYISSAFHVSGIVLVLLPKLLHGINIRTVFFGAWLLRGLVCFLYATLFFLSGQPAVMVIMLVYTLFAVLRSAGIPMHHPLQRQLVLPSEEGQFISRLHVRLSLSQLVSQVVSFLFLSLQWVSGAFGLIFVPLVGAGCNTVAAVHISRIPSNETVSYRDGRTVLVLFRETMRDRIRSRVVAAYWLGLSALIVFAFGIAFLRREVGMPTNMVFLYTIGTALSAIAASHFVRPFADRMGSRPLLILAHGCLMLCALIWVGVSPELPWAVYYLLGFVSYFFLRLELLLVSRLIVRSLPPQDRISFTSMLHFCAALAALVVGLLAGQLADIGLEMIAWTAAVGFPFELPHQYSLTFLFGAGLSLAAVLVACSLRDHGSMSLRQSASILLSWRSLRAFLQEA
>NC_017098.1|WP_014454244.1|166670_167291_+|NAD(P)H:quinone-oxidoreductase
MSSQPKIKVLFYSTYGHMYQMAEAAAEGARQAGAKVELKRFPEIIPAEQLQAMGAAEAQKAFAHIPEAGPTDFEELDGLIIVTATRYSNIPGQVANILDQTGKSWAQQLLKGKVGGAIVGTGTQHGGQESAALTVHRFFLHMGMVVAGLPSTFQGMFGVDEVKGGTPYGATTVSGADGSRMPSEVELEAARYQAAYITELAGKLKG
>NC_017098.1|WP_014454243.1|165818_166544_+|DUF4867-family-protein
MSPELSLLERVQQENPDRQLLAVHHADFAPYGRVLGGLSAAEALASAQQMITFPEQGVQYLRSVAELERLPLRGELESQVFGGMPIQLGWCIGTNQVLNALEFHKSSEVIIAGSPVVLVLGHRHDIRDNRYALEQAACFYLPAGTAVELYAECLHFAPIGAAAGPFLTLIALPAGTNAPLEGQSTPPLPAGDQGAGASDEQQLLWQCNKWLLAQPGSPQAEQGAHVGLTGSQVRIQPVGSL
>NC_017098.1|WP_014454242.1|163776_165822_+|alpha-glucosidase
MLRIETSETGCNVWFRGKLILQHSARKPAIELGIGTADFPERFGMFRIRETARDIRPLARVQVLQQDDTTATLRFGDALSLKLQVIDERLHVHPEGYDPECNRFVLRMPSDRDEHIYGCGEQYSRLDLKGSRVPLFVQEQGVGRGKDLITLLANLSHGAGGNHFTTYFPQPTYVTSRNLFFHTDASAYAVFDFRRANRSSLEFWQVPNEIVIGAGDSMAEVLGSLTLLLGRQPQLPDWTWDGVWLGVQGGTEVVQQKLDSAREAGLRVGAVWAQDWEGRRITSFGKQLRWNWRYDNERYPDLPGYIQELQRDGIRFLGYINPFLAIGTTNTEEGPVPPEFFYNEARDKGYCVKHPDGSDYYTYVTTFPAATLDLTNPEAFAWIKGIIKREMIGIGLSGWMADFGEYFPIDSTVKSGENPELVHNRFPALWAKANYEALEETGKLGEVVFFMRSGFTGSSRWSTSNWAGDQLVNWSIHDGLASVIPAGLSLGFCGVANFHSDIGGYTTVAYVKRRKEVFMRWAELAAFTPTMRTHEGNRPDDNWQFDSDAETLQHFARMSAVFTRLKPYHIRLSEEYQQRGIPMLRHCGLMYQDDPVCHRLQYQFMYGSDLMVAPVIRKGQRHVRCYLPQDDWIHLWTGRRLQGGRHHRIAAPIGKPAVMYRANSEFASLFAGISHTDREVE
>NC_017098.1|WP_014454241.1|161882_163790_+|MFS-transporter
MQDGHGTEQLPGGDARPNGSRAERPVRVRNLLAYGIGDFYGGGSFLIIGMLFMFFLTEVVGLSPIWAAFVFAVGKVWDAVSDPIMGYISDNTRSRYGRRRFYLVLGILPVFISFGLLWLPITLETAAWSVVYYSFAYIFFSTVFTMVMVPYSALNAEMTADYAVRTRLSGVRIIFSQLAALFAGTIPNMIIQAFRRPAAAAAEVLAGLKQTAAAAAAGDPVRLDELAGELQQAQAALAEGGLAAGAAGAENGSRLMRLLPQRFSEFADRVPEIIGELGVLQQRLAGAANSAEGTAAIAAEAAAVQGYLSGVIPQAEAGLRAASQLGYFTMGLVFALLYALPWIVVFLGTWELPYERSQPRYNSPLDVFGNFRTIFVNRSFRVHIGMYICAYTAMDVVMALFVYYLTFSLRQPGWYPIAMGSLLLTQIAMLPVYVTIANRKGKGFAYRMGLSLWAVGMGLAFLLTPDSSIAVLALSCVVIGSGLSAGVMIPWAILPSITDVDEMITGQKRAGTYAGAMTLVRKLVQGLVAMPLVGIALQQIGFVSGLGAQSPETLFRLKLLFLAAPLAILIIGVVTSLRFRITPHTHAVLRAELARRSAGGSGDEVSSETREILEGLTGLEYSKLYQQQGRPHAED
>NC_017098.1|WP_014454240.1|161089_161824_+|sulfite-exporter-TauE/SafE-family-protein
MPELAVLGLIYGTAGLLQGVVGFGFALLSVPLVAGIYDLPTAVIMNTVVGTANCAYKAWLLREQAEYRLVLQFFAAASLGVPVGVLAISRAAHGPAMIGLGLFVIVVAAANLLSREGVGVAMRRSEGFWLLAGLTGLFAGAFSTPGPAAVPYFVGRSSRVESAKANLQVFFTLAALPVIVFHSAAGNMSATALARASLFLPLVLLLTFAGTRAARLLRADRLRRVVDGGLIALGAYLILEQLAR
>NC_017098.1|WP_014454239.1|159598_161062_+|DASS-family-sodium-coupled-anion-symporter
MSGIEKQSSLRRQYFFLALACLILLAMVLVPMPESITQVDNAELTPAGQIAMGVLLFALVLWITEVIPFHITGLMAVILLALLQVDTFQEIVMIGFGNHIVVFFIGVLTLSAFITHSGLGKRISVFLLSKTGNSTAMILLGFLTAGALLSMWITDMAVAAMLMPLGVSILREEGLKPLKSNFGRALMISCCWGPTIGGIGTPAGAGPNPIAIQFMADMAGINVSFIDWMKFGVPSALLLLLPSWGLLLLFFKPELKRLTRTSEELREEFRKLPPMEQEEKTTLVLFVLTVILWLTTPLWERLLGIPIPISLPVMLTGCLFFLPGLTGISWKEVQGEISWSGILLIVTGISLGMMLYRTGAANWLSVVLLGGIGGLGRYLQIFSIVLIVSFLKVAFSSNTVTATIIIPIMIALAQNLGLDVAAITIPAGLTASMAFILVTSTPTNVIPYTAGYFSIKDLAIAGIAMTIVSSFILALVIMVVLPISGLS
>NC_017098.1|WP_014454238.1|158720_159602_+|CoA-binding-protein
MSIFVQKNTRILVQGITGKEGSFWTNHMIEMGARVVAGVTPGKEGEQIHGVPVYHTVKRACAAVRPDAAMLFVPARFTKDAVFEALDAGIRRIVTIADGIPLHDQVAIRAAAVAAGAQVVGGNTSGVISPGVSMMGIFPYWIDRVYKPGRIGVMTRSGSLTNEVTSMIVRGGYGVSTLIGVGGDPVPGTRFAEFLPEYERDPDTDAVVIVGELGGTMEEEVAQAIADKRFTKPMVAFIAGRTAPAGKKMGHAGAIVTGGTGSVADKTSALTEAGGYVAMRPRLVGELLREALA
>NC_017098.1|WP_014454237.1|157494_158721_+|succinyl-CoA-synthetase-subunit-beta
MRLLEYQGKDVFRRAGLAVPQARLLTVESPGQCAEAVRTAAGELLQTGGAEHDAKKPATAGAGPDAAEPATAGAARVVVKAQVNMGGRGKAGLIKLADSPDTAAAAAAEILATPYSVPRLLVEEAVDLERELYLSISPDAGSARFIVLASLEGGVEIEELARERPDAIKRLSIDPIAGLQPYQSRELAYDLGLAGDVARQFARLVAALYRVFRDNDAELAEINPVFLTRDGRLVAGDAKLIIDDNSLDRQPQFEISREQFESDAAYESALEGIPYVQFDGDISLMCAGAGLTTTVYDLVNFEGGTVANYLEFGGPNYHKAQRAMELCLQNRSKVILVVTFGTIARADVMADGVVEAIRNLQPDRPIVTCIRGTNEEAAEQTLRAAGLEPLFDAEEAVRTAVALARERA
>NC_017098.1|WP_014454236.1|156065_157475_+|aldehyde-dehydrogenase-family-protein
MSDDAGYIAELVTRARRAQEQIADYTQQQIDDVCLSVGWEVYEDRNIADLARVAVESSGMGNVPDKITKHKVKVLGVLKDLKGAISVGEIFRDPGRGITKYAKPVGVVGALLPVTNPTATPASNGLSILKGRNAVIFAPHPRAAAASKLAVEYMRQGLKRVGAPEDLVQITEEPSIGRTGELMKQVDLVVATGGGAMVKAAYSSGTPAYGVGPGNSVQIIAEDADLPDAVAKIALSKVFDYATSCSSENSVIIHQDLYEQAVARFVEHEHSYLIQGEEREQLERWMWRPNKHGVPGLNPAIIAQSAVRIAADAGIQVPEETRILLVEGRDPLEQDHFAEEKLCPVLTLYRARDFAEAVDLLTRLTDNAGTGHSCGIHTFRSEYVHELGMRMRTSRIMVRQAQAPANGGNFFNGMPSTVTLGCGTWGGNSTTENINYRHFLNVTWVSEPIPVEKPSDEEMWGDFHSRYPG
>NC_017098.1|WP_156809921.1|169000_170305_+|hypothetical-protein
MCKKVSVAGLARTVAPGCGAMLLAALWLAALSGCASVGQAEREEAVLESALVFPAGELHPGMIDTLARHRVILVGETHYVQEHHELLPELAAALVDYRSAGGLIVMNENQHALSWLAEDYVAGRRDSYPPGIGPLDGTILQGLRAANRKLPESQQITYRYFDMNHWSDSAQLSLYAMGVELGIVDRFVDVLVTDPDTSEYRQAIEQLADYVDDTSDSLRAEIGDLWYGRLQELLEIELRSIPLRQRWNDQQREQLIIDLIEGQLADPQLEQLVINTGMYHAQRTRYMGTRQTWLGEHLAERERERKLLPDTADGRSTEPAPAGLYALAVFGLRGERILRFYEPDPRPIPSPSQRRRHNLVRLIDDASRLGTRRSPRPAQPGVVFLDLSDRAFSRETRIAFTGREMTAVPNRQFDGYLVFPQITVLQSLLEPDQP
>NC_017098.1|WP_014454247.1|170364_171972_-|DUF3365-domain-containing-protein
MNFGTRIVLIVVGVFAVTVAVTLVLSGRQIQHQAMLGITEQARGISMVSEEIRDSVSGLWENQVIDQDGLFAEAEQAMHGVQSNAERLQVAQGLRMYDAIPIVASWQAIERNASELGFEFRVISTEPRNPRNMAEGREAELLEQMSREGTLSYHEVDSELNAVRFVRLINVQDGCLICHGDGDRDVLGFPMEGMRAGDLRGGFQYLFPLDQLQSDIRVTVASISGAALLILLLASLFIHSMVNRLAIRPVRRLRGFAEDIAGGNLGVQIEPTPGRDDIALLQEGMRRMVAALQEIVGKVKTASHAVSLEGADIRSSSQELSTGSTEQAASVEEISASMEETAAGIQQNAENAEETRRIAVQVAADADEGGQAVEQTVQAMREIVEKIGVIQEIARQTDLLALNAAVEAARAGTEGRGFAVVANEVRKLAERSRDAATEISEMSAVNVKVVDRAGEILRRIVPEIRRTAELVQEISGSSQEQSRGVNEINLSIQQLDNVVQSNAAAAEELAATSEALSQQADILEDVMSFFRLEEE
>NC_017098.1|WP_014454248.1|171991_173041_-|cytochrome-c-biogenesis-protein-CcsA
MTQLLMVGAGLSAAAGTARAFGVFGMQRRWLERMTRLERLVPLTGLLYLTLRSLAAGFPALAGTDAVLVIIATLLLPAAEISTRRSPAGVQGVLRLWGAVTAAGLLLLAMFPGIATTPSAPVPALRSAWLVLHVGATLAGEAFFLVGAGAALASVLAGRQARRMAGSPADPAVWTFGRERPEGAEGRLVALRKKAVAYHRVSAAAISVGYPLFTLGALVFGALWAFRAWGRYWAWDPKEVWALVTWLVYTLYLHLQLLGGSGSRAGAGTNGGAPAGTGSGEVAGGTTGATSKEAAGEPDGAAVGAAGAEGTPRAERRRAILNWLAILGVLLALFTFAGVNLLFDSIHSY
>NC_017098.1|WP_014454249.1|173037_173943_-|cytochrome-c-biogenesis-protein-ResB
MIRSALHYLRSLRLTLVLLAGLAVLLGLDAFPGGGLQLIGTPLFWLIIGLLGANTAACTGWALWHRPPTRLLNWGPHLIHLGLLFLLAGLVLSLLLRHEETVVLEQGQTERLQAGIILQLTEAREVRNDRGDLVNWESRLKIQAPGQEPWQGTTAVNRPLRIPPYRLYQTDFETRPAVRLLPAGSADGQIERTAGTEVVLAVNEGYRENDTLWVLSRDDSQPGEPDSFFFLGYRDGQMTGRRSLQEGAESLGLEPLEATEKTLSGLRLSYDPGALPAAAGALLLGFGVILYGIERYRRRLA
>NC_017098.1|WP_014454250.1|173959_175051_+|aminopeptidase
MNLVREHPKFSIVMSLLILAAVAAWVGRYYLVQGWGLLQVYGRARSVDRWLAGDRLSEDERALLLNVQDIRRFAREEIGLSDHRNYTTYARVDRSYLADVVHAAPPDSLRPHLFRYPFFGRMPYKGFFSRTRAEAEARRLEQQGLEVLVRPVRGFSTLGILRDPLFSYMTGYELYDLADLIIHEQVHATVWLDDHYAFNENLAVFVGRRGALEYLVAQEGPPNDAAVQLARDVWHDRRAFRIALHELYRRWEAIYQQDIPLPEMLQQREQAWQEFGAEWRARYSQRFRTDRFYDFPNRTMDNAYLSLQIGYTSLQDEFEQIYELLGGDLRLLMQAAAAVQDTGAPDFDPMQQLWQVAHRLATR
>NC_017098.1|WP_014454251.1|175119_175677_+|hypothetical-protein
MVFTTAVWRGIVMALSYSFRLSEQEQRQLYEHRFSRLLAFTPFFAECDQPMFTAIDHISSNMVASRGAESLSDHSEEDNTYPEHRIQRLFTHSGGDSQILKRHRALVTLFLAAGYHRDREYDDRVGIYNPFNAGVWNWQDLHDHYYGILQSIPCPEMDEIFSYADVNDPSSYWTETRSMVPQSRT
>NC_017098.1|WP_041396887.1|175689_176556_+|LuxR-family-transcriptional-regulator
MKHRIDSVRLIGRMAAGVGFAASLMNILNILFLKGGAPPDLLVPTVLHPAGAAVALLLIQRINLRAAQAAQAILVLLIGLIAMEEYPEAIYGHAFLLLGWIMLVQYRLLEGKRLLVATGALLAAALAAISIGIARGVFNLTWVSAFNIIMFDVFVMSVGAVLYRDTLRSYLDKIRFTDTLRRQRSLDRKVREIEAERERYLKRVAELEQQLTAVRTEMKPFPLQERGITPAESEVIRVLVERQCSDADIASVLGKSLATVRVQMRSIFEKLGVESRVQVIELCRYNWD
>NC_017098.1|WP_169313591.1|177378_178806_+|HAMP-domain-containing-protein
MDYQRDDGTRMHAIFSPVPGSPNWAVAYLIPYSDLNAAIYRLSWIISLLVAGTIGVMLIAAMVVANLTARPIVESVAQAQTIAQGDLTREIPPVYLQRRDEIGTLAKALDSMQEQLTDVVQSIQQTAEYVSAGSREMSDAAQEVSNGSEQLSSTAQELSQGTSQQAASVEQVSASMEQMAANIQQSADNAMATEQIANQSADEAEQGGKAVGETVVAMKQIAEKIAIIEDIARETNMLSLNAAIEAARAGEHGKGFAVVAAQVRKLAENSSKAAGEISNLSTHSVKIAEEAGQMLERIVPNIRKTAELVQEISASSREMNSGAGQVNAAVSQLDQVVQQSSASAEQVASTSEEQSSQTEQMAATAEQLSAQARQLEEVIAFFKTAARQAGALPGPQPSPRSGERSGERAGDRGARDARAASSPSRGAATAARTREAAAPASPRAGERHQPRPKQTGITLAQRPLLNDDDADFEEF
>NC_017098.1|WP_014454254.1|178806_179112_+|STAS-domain-containing-protein
MQVERTEGGDRTLVRITGSVGIQDIAELHRELIPALRSGAVCIDTSGVTAADFSLVQLLAAARRDAVRRGVPLDLEQHLGTAVREAAARSGLAHRIDGKAG
>NC_017098.1|WP_014454255.1|179116_181162_+|chemotaxis-protein-CheA
MNVPNTIFIDETTEILAQLEQDVVSLEQSPHDADLLNRMFRGIHTIKGSGGMFGFDYLSEQAHVMENVFDRLRDRELQVTRQIIDLTLQGIDQLKLMLQDPDEHPRTAGWDQLAEGTTGAATSDAPPATPDSTEATFGVYHIYFRPDPQLMMHGARPLLLIQELEELGEVRVTADDAAIPDFESLDPEQCLCSFDILLAGEIPEQDIRDVFMFVEHGAELRIRRIAISQDDPQELPRLGEILQQRTGISDEQMQRILDEQQRYLKLGELAVAKGYVRKEDVDGALQEQRFVREQAARHSQASSSLRIPGAKVDAAVNLVGELVTMQARLSRRAHELQDPLMGSIVEGLELLVADLRQGVMSMRLVPLQDTFLGFRRLVRDLANDTGKALNLELSGGETEMDKLVIDRLKGPLVHLIRNCADHGIEGAEQRAGAGKPVEGTIRIAARYIGSQVEIEIADDGGGVDLERVRRKAVERGILAEGEVLEPGDVLAILAAPGFSTSEQVSSVSGRGVGMDAVQMEVEALSGQLSMDSTEGQGTVFRIRLPLTLAIIDSLLVRVGQEFFTIHLSDVDECFILRDAPQVLGTRKRITSHNGAALPYIDLRQHLGLPGTTPQIANVVVSAAAGQPVGIVVDQIVGQSQAVIKPLSGAVHTAPEISGSTILGDGGISFILDIVRLVGSLS

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Crispr_ID: NC_017098_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017098_2

490483-493390

TypeI-F

I-F

Consensus_repeat	Method
GTTACCTGCCGCATAGGCAGCTTAGAAA	PILER-CR
GTTACCTGCCGCATAGGCAGCTTAGAAA	CRISPRCasFinder
GTTACCTGCCGCATAGGCAGCTTAGAAA	CRT

48 spacers

cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL

The CRISPR arrays of NC_017098_2

>merge|NC_017098|2|490483-493390|PILER-CR,CRISPRCasFinder,CRT
GTTACCTGCCGCATAGGCAGCTTAGAAACGAGACAGGATCGGTCACCCGCTTTTCTGCGAGTTACCTGCCGCATAGGCAGCTTAGAAATGAGCCATGGTGGTAGTATGCGTCCCGGGATGGTTACCTGCCGCATAGGCAGCTTAGAAAAACCTTTGGTTGCTCCGATATTGCACGAAATTGTTACCTGCCGCATAGGCAGCTTAGAAACTGTGGTGTCATCTGGCATTATTAACAACAAGGTTACCTGCCGCATAGGCAGCTTAGAAATTTACTCCTGTATTGTCACGCAAGCGATATACGTTACCTGCCGCATAGGCAGCTTAGAAAACTATCCTCAAGTACGAAAGACAAGAATATTGGTTACCTGCCGCATAGGCAGCTTAGAAAGTTGTCGTCGAGGATGCCCCATTTTACTGTATGTTACCTGCCGCATAGGCAGCTTAGAAATCCTTAGAGTCTATTCCATAACCAGTCCCTAAGTTACCTGCCGCATAGGCAGCTTAGAAATGTCTACGACCGCACCGAGCATAAGCAGCTGGGTTACCTGCCGCATAGGCAGCTTAGAAAGTCCGTCAGTCGCTGGCATTCCACGGCATCAAGTTACCTGCCGCATAGGCAGCTTAGAAATACCGATTCGCTCATGCGCTGCAGCACGAGTTGTTACCTGCCGCATAGGCAGCTTAGAAATACTTGCAAACTTGGCCGGACAAGCTGTTAATGTTACCTGCCGCATAGGCAGCTTAGAAATTGCAGTTCTACCCGCATGTCCTGTAGCTTGGGTTACCTGCCGCATAGGCAGCTTAGAAAGGTATGATTGGTCTATGCCTATGGTGTAGCTAGTTACCTGCCGCATAGGCAGCTTAGAAATCCTTCAAAAGTTGCCGGGGAGTTACCCCCGGGTTACCTGCCGCATAGGCAGCTTAGAAAATTCTCGCGCTCGGGCAATGCGGCAAGCAAGGGTTACCTGCCGCATAGGCAGCTTAGAAAAGCAGCTCCGACAGGTCAGCATTCTTTCTGACGTTACCTGCCGCATAGGCAGCTTAGAAAATCTAATACAGCTGCATATTGTGACAACGTGTGTTACCTGCCGCATAGGCAGCTTAGAAATTGCAGAGCTGCTGGTAGAGCGCATGACCGGCGTTACCTGCCGCATAGGCAGCTTAGAAAAGTATTGTGGAGCATCCGCGCCTGATGTAGTCGTTACCTGCCGCATAGGCAGCTTAGAAATATCACAACCTTATTCCTCCACGACTAGACCCGTTACCTGCCGCATAGGCAGCTTAGAAATGATACTGGCGCAGAAACATATGAAGTCAATTGTTACCTGCCGCATAGGCAGCTTAGAAATTAGATGGCTGCTCTGTTTCGTGTACTTTTCCGTTACCTGCCGCATAGGCAGCTTAGAAATACGTAATCAGGCGGACATCGGCAGCATACTGGTTACCTGCCGCATAGGCAGCTTAGAAATGTCCTATTTCGGTGAACAACCTCAATCCATTGTTACCTGCCGCATAGGCAGCTTAGAAATTAATGGTCAATCAGTCCTGGTGTTGACTGAAGTTACCTGCCGCATAGGCAGCTTAGAAAATCAGGGCGCGCTTCAAATTCGCGATGTCGGAGTTACCTGCCGCATAGGCAGCTTAGAAAATAATGGCCCTCCCTGTCTTTCCCGCTACTGCGTTACCTGCCGCATAGGCAGCTTAGAAATCCTGCAACAGCTACCCGCAATTCACCCGTCAGTTACCTGCCGCATAGGCAGCTTAGAAATCGTCATTCCATAAGAGCTCCCAAGTTGTGCCGTTACCTGCCGCATAGGCAGCTTAGAAACCGAGGGCATGAGCGTGACCGTGCAGGTAACAGTTACCTGCCGCATAGGCAGCTTAGAAAGATATGCCCGAGGACTATCCGTACACCGTGACGTTACCTGCCGCATAGGCAGCTTAGAAAGTAAAGCCATATTTTAAACATGATTCAAAGGTGTTACCTGCCGCATAGGCAGCTTAGAAAATCATGATCATGAATGCATCTTCCGAGTCCTCGTTACCTGCCGCATAGGCAGCTTAGAAACCTGTCAGTTCGTTCTGCCTGATCCATTCATCGTTACCTGCCGCATAGGCAGCTTAGAAAAGTTTCGGGTCAACCTCATCTGGTATGTGCATGTTACCTGCCGCATAGGCAGCTTAGAAATTCCACCAATATACACCCGGCCGACACTTTTGGTTACCTGCCGCATAGGCAGCTTAGAAATTCCACCAATATACACCCGGCCGACACTTTTGGTTACCTGCCGCATAGGCAGCTTAGAAAAAAACCGGGTGGAACGGTTACAGCCAGTATTGGTTACCTGCCGCATAGGCAGCTTAGAAAATCATCGCCTTTAATCAAAGCGAATTTAGAATGTTACCTGCCGCATAGGCAGCTTAGAAATCGGGAAACTCGTTCTGGATTTGCCGCCTGAGGTTACCTGCCGCATAGGCAGCTTAGAAATAAGAATTACTTCATCCGCAAAGTTAGGATTCGTTACCTGCCGCATAGGCAGCTTAGAAAGCAAGCGGATTTCATGCAAGCTATAAATCCGGGTTACCTGCCGCATAGGCAGCTTAGAAATGATGGTCGCCGTAGTGGAACAGACCCTGTTCGTTACCTGCCGCATAGGCAGCTTAGAAATGTATCTCTGTGATCATCATTGCTCTGCCCCTGTTACCTGCCGCATAGGCAGCTTAGAAATGTCCTATTTCGGTGAACAACCTCAATCCATTGTTACCTGCCGCATAGGCAGCTTAGAAATGGGTGTTGGGGGCGTCGACCTCGCTGGTTTCGTTACCTGCCGCATAGGCAGCTTAGAAATTGGATTGTTCGCCATAGCCTCGCGCATCCGAGTTACCTGCCGCATAGGCAGCTTAGAAA

>NC_017098|2|1|490483-493390|PILER-CR
GTTACCTGCCGCATAGGCAGCTTAGAAA	CGAGACAGGATCGGTCACCCGCTTTTCTGCGA
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGAGCCATGGTGGTAGTATGCGTCCCGGGATG
GTTACCTGCCGCATAGGCAGCTTAGAAA	AACCTTTGGTTGCTCCGATATTGCACGAAATT
GTTACCTGCCGCATAGGCAGCTTAGAAA	CTGTGGTGTCATCTGGCATTATTAACAACAAG
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTTACTCCTGTATTGTCACGCAAGCGATATAC
GTTACCTGCCGCATAGGCAGCTTAGAAA	ACTATCCTCAAGTACGAAAGACAAGAATATTG
GTTACCTGCCGCATAGGCAGCTTAGAAA	GTTGTCGTCGAGGATGCCCCATTTTACTGTAT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TCCTTAGAGTCTATTCCATAACCAGTCCCTAA
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGTCTACGACCGCACCGAGCATAAGCAGCTGG
GTTACCTGCCGCATAGGCAGCTTAGAAA	GTCCGTCAGTCGCTGGCATTCCACGGCATCAA
GTTACCTGCCGCATAGGCAGCTTAGAAA	TACCGATTCGCTCATGCGCTGCAGCACGAGTT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TACTTGCAAACTTGGCCGGACAAGCTGTTAAT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTGCAGTTCTACCCGCATGTCCTGTAGCTTGG
GTTACCTGCCGCATAGGCAGCTTAGAAA	GGTATGATTGGTCTATGCCTATGGTGTAGCTA
GTTACCTGCCGCATAGGCAGCTTAGAAA	TCCTTCAAAAGTTGCCGGGGAGTTACCCCCGG
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATTCTCGCGCTCGGGCAATGCGGCAAGCAAGG
GTTACCTGCCGCATAGGCAGCTTAGAAA	AGCAGCTCCGACAGGTCAGCATTCTTTCTGAC
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATCTAATACAGCTGCATATTGTGACAACGTGT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTGCAGAGCTGCTGGTAGAGCGCATGACCGGC
GTTACCTGCCGCATAGGCAGCTTAGAAA	AGTATTGTGGAGCATCCGCGCCTGATGTAGTC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TATCACAACCTTATTCCTCCACGACTAGACCC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGATACTGGCGCAGAAACATATGAAGTCAATT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTAGATGGCTGCTCTGTTTCGTGTACTTTTCC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TACGTAATCAGGCGGACATCGGCAGCATACTG
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGTCCTATTTCGGTGAACAACCTCAATCCATT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTAATGGTCAATCAGTCCTGGTGTTGACTGAA
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATCAGGGCGCGCTTCAAATTCGCGATGTCGGA
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATAATGGCCCTCCCTGTCTTTCCCGCTACTGC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TCCTGCAACAGCTACCCGCAATTCACCCGTCA
GTTACCTGCCGCATAGGCAGCTTAGAAA	TCGTCATTCCATAAGAGCTCCCAAGTTGTGCC
GTTACCTGCCGCATAGGCAGCTTAGAAA	CCGAGGGCATGAGCGTGACCGTGCAGGTAACA
GTTACCTGCCGCATAGGCAGCTTAGAAA	GATATGCCCGAGGACTATCCGTACACCGTGAC
GTTACCTGCCGCATAGGCAGCTTAGAAA	GTAAAGCCATATTTTAAACATGATTCAAAGGT
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATCATGATCATGAATGCATCTTCCGAGTCCTC
GTTACCTGCCGCATAGGCAGCTTAGAAA	CCTGTCAGTTCGTTCTGCCTGATCCATTCATC
GTTACCTGCCGCATAGGCAGCTTAGAAA	AGTTTCGGGTCAACCTCATCTGGTATGTGCAT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTCCACCAATATACACCCGGCCGACACTTTTG
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTCCACCAATATACACCCGGCCGACACTTTTG
GTTACCTGCCGCATAGGCAGCTTAGAAA	AAAACCGGGTGGAACGGTTACAGCCAGTATTG
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATCATCGCCTTTAATCAAAGCGAATTTAGAAT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TCGGGAAACTCGTTCTGGATTTGCCGCCTGAG
GTTACCTGCCGCATAGGCAGCTTAGAAA	TAAGAATTACTTCATCCGCAAAGTTAGGATTC
GTTACCTGCCGCATAGGCAGCTTAGAAA	GCAAGCGGATTTCATGCAAGCTATAAATCCGG
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGATGGTCGCCGTAGTGGAACAGACCCTGTTC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGTATCTCTGTGATCATCATTGCTCTGCCCCT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGTCCTATTTCGGTGAACAACCTCAATCCATT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGGGTGTTGGGGGCGTCGACCTCGCTGGTTTC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTGGATTGTTCGCCATAGCCTCGCGCATCCGA
GTTACCTGCCGCATAGGCAGCTTAGAAA

>NC_017098|2|2|490483-493390|CRISPRCasFinder
GTTACCTGCCGCATAGGCAGCTTAGAAA	CGAGACAGGATCGGTCACCCGCTTTTCTGCGA
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGAGCCATGGTGGTAGTATGCGTCCCGGGATG
GTTACCTGCCGCATAGGCAGCTTAGAAA	AACCTTTGGTTGCTCCGATATTGCACGAAATT
GTTACCTGCCGCATAGGCAGCTTAGAAA	CTGTGGTGTCATCTGGCATTATTAACAACAAG
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTTACTCCTGTATTGTCACGCAAGCGATATAC
GTTACCTGCCGCATAGGCAGCTTAGAAA	ACTATCCTCAAGTACGAAAGACAAGAATATTG
GTTACCTGCCGCATAGGCAGCTTAGAAA	GTTGTCGTCGAGGATGCCCCATTTTACTGTAT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TCCTTAGAGTCTATTCCATAACCAGTCCCTAA
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGTCTACGACCGCACCGAGCATAAGCAGCTGG
GTTACCTGCCGCATAGGCAGCTTAGAAA	GTCCGTCAGTCGCTGGCATTCCACGGCATCAA
GTTACCTGCCGCATAGGCAGCTTAGAAA	TACCGATTCGCTCATGCGCTGCAGCACGAGTT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TACTTGCAAACTTGGCCGGACAAGCTGTTAAT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTGCAGTTCTACCCGCATGTCCTGTAGCTTGG
GTTACCTGCCGCATAGGCAGCTTAGAAA	GGTATGATTGGTCTATGCCTATGGTGTAGCTA
GTTACCTGCCGCATAGGCAGCTTAGAAA	TCCTTCAAAAGTTGCCGGGGAGTTACCCCCGG
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATTCTCGCGCTCGGGCAATGCGGCAAGCAAGG
GTTACCTGCCGCATAGGCAGCTTAGAAA	AGCAGCTCCGACAGGTCAGCATTCTTTCTGAC
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATCTAATACAGCTGCATATTGTGACAACGTGT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTGCAGAGCTGCTGGTAGAGCGCATGACCGGC
GTTACCTGCCGCATAGGCAGCTTAGAAA	AGTATTGTGGAGCATCCGCGCCTGATGTAGTC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TATCACAACCTTATTCCTCCACGACTAGACCC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGATACTGGCGCAGAAACATATGAAGTCAATT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTAGATGGCTGCTCTGTTTCGTGTACTTTTCC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TACGTAATCAGGCGGACATCGGCAGCATACTG
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGTCCTATTTCGGTGAACAACCTCAATCCATT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTAATGGTCAATCAGTCCTGGTGTTGACTGAA
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATCAGGGCGCGCTTCAAATTCGCGATGTCGGA
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATAATGGCCCTCCCTGTCTTTCCCGCTACTGC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TCCTGCAACAGCTACCCGCAATTCACCCGTCA
GTTACCTGCCGCATAGGCAGCTTAGAAA	TCGTCATTCCATAAGAGCTCCCAAGTTGTGCC
GTTACCTGCCGCATAGGCAGCTTAGAAA	CCGAGGGCATGAGCGTGACCGTGCAGGTAACA
GTTACCTGCCGCATAGGCAGCTTAGAAA	GATATGCCCGAGGACTATCCGTACACCGTGAC
GTTACCTGCCGCATAGGCAGCTTAGAAA	GTAAAGCCATATTTTAAACATGATTCAAAGGT
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATCATGATCATGAATGCATCTTCCGAGTCCTC
GTTACCTGCCGCATAGGCAGCTTAGAAA	CCTGTCAGTTCGTTCTGCCTGATCCATTCATC
GTTACCTGCCGCATAGGCAGCTTAGAAA	AGTTTCGGGTCAACCTCATCTGGTATGTGCAT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTCCACCAATATACACCCGGCCGACACTTTTG
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTCCACCAATATACACCCGGCCGACACTTTTG
GTTACCTGCCGCATAGGCAGCTTAGAAA	AAAACCGGGTGGAACGGTTACAGCCAGTATTG
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATCATCGCCTTTAATCAAAGCGAATTTAGAAT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TCGGGAAACTCGTTCTGGATTTGCCGCCTGAG
GTTACCTGCCGCATAGGCAGCTTAGAAA	TAAGAATTACTTCATCCGCAAAGTTAGGATTC
GTTACCTGCCGCATAGGCAGCTTAGAAA	GCAAGCGGATTTCATGCAAGCTATAAATCCGG
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGATGGTCGCCGTAGTGGAACAGACCCTGTTC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGTATCTCTGTGATCATCATTGCTCTGCCCCT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGTCCTATTTCGGTGAACAACCTCAATCCATT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGGGTGTTGGGGGCGTCGACCTCGCTGGTTTC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTGGATTGTTCGCCATAGCCTCGCGCATCCGA
GTTACCTGCCGCATAGGCAGCTTAGAAA

>NC_017098|2|1|490483-493390|CRT
GTTACCTGCCGCATAGGCAGCTTAGAAA	CGAGACAGGATCGGTCACCCGCTTTTCTGCGA
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGAGCCATGGTGGTAGTATGCGTCCCGGGATG
GTTACCTGCCGCATAGGCAGCTTAGAAA	AACCTTTGGTTGCTCCGATATTGCACGAAATT
GTTACCTGCCGCATAGGCAGCTTAGAAA	CTGTGGTGTCATCTGGCATTATTAACAACAAG
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTTACTCCTGTATTGTCACGCAAGCGATATAC
GTTACCTGCCGCATAGGCAGCTTAGAAA	ACTATCCTCAAGTACGAAAGACAAGAATATTG
GTTACCTGCCGCATAGGCAGCTTAGAAA	GTTGTCGTCGAGGATGCCCCATTTTACTGTAT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TCCTTAGAGTCTATTCCATAACCAGTCCCTAA
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGTCTACGACCGCACCGAGCATAAGCAGCTGG
GTTACCTGCCGCATAGGCAGCTTAGAAA	GTCCGTCAGTCGCTGGCATTCCACGGCATCAA
GTTACCTGCCGCATAGGCAGCTTAGAAA	TACCGATTCGCTCATGCGCTGCAGCACGAGTT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TACTTGCAAACTTGGCCGGACAAGCTGTTAAT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTGCAGTTCTACCCGCATGTCCTGTAGCTTGG
GTTACCTGCCGCATAGGCAGCTTAGAAA	GGTATGATTGGTCTATGCCTATGGTGTAGCTA
GTTACCTGCCGCATAGGCAGCTTAGAAA	TCCTTCAAAAGTTGCCGGGGAGTTACCCCCGG
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATTCTCGCGCTCGGGCAATGCGGCAAGCAAGG
GTTACCTGCCGCATAGGCAGCTTAGAAA	AGCAGCTCCGACAGGTCAGCATTCTTTCTGAC
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATCTAATACAGCTGCATATTGTGACAACGTGT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTGCAGAGCTGCTGGTAGAGCGCATGACCGGC
GTTACCTGCCGCATAGGCAGCTTAGAAA	AGTATTGTGGAGCATCCGCGCCTGATGTAGTC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TATCACAACCTTATTCCTCCACGACTAGACCC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGATACTGGCGCAGAAACATATGAAGTCAATT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTAGATGGCTGCTCTGTTTCGTGTACTTTTCC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TACGTAATCAGGCGGACATCGGCAGCATACTG
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGTCCTATTTCGGTGAACAACCTCAATCCATT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTAATGGTCAATCAGTCCTGGTGTTGACTGAA
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATCAGGGCGCGCTTCAAATTCGCGATGTCGGA
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATAATGGCCCTCCCTGTCTTTCCCGCTACTGC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TCCTGCAACAGCTACCCGCAATTCACCCGTCA
GTTACCTGCCGCATAGGCAGCTTAGAAA	TCGTCATTCCATAAGAGCTCCCAAGTTGTGCC
GTTACCTGCCGCATAGGCAGCTTAGAAA	CCGAGGGCATGAGCGTGACCGTGCAGGTAACA
GTTACCTGCCGCATAGGCAGCTTAGAAA	GATATGCCCGAGGACTATCCGTACACCGTGAC
GTTACCTGCCGCATAGGCAGCTTAGAAA	GTAAAGCCATATTTTAAACATGATTCAAAGGT
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATCATGATCATGAATGCATCTTCCGAGTCCTC
GTTACCTGCCGCATAGGCAGCTTAGAAA	CCTGTCAGTTCGTTCTGCCTGATCCATTCATC
GTTACCTGCCGCATAGGCAGCTTAGAAA	AGTTTCGGGTCAACCTCATCTGGTATGTGCAT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTCCACCAATATACACCCGGCCGACACTTTTG
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTCCACCAATATACACCCGGCCGACACTTTTG
GTTACCTGCCGCATAGGCAGCTTAGAAA	AAAACCGGGTGGAACGGTTACAGCCAGTATTG
GTTACCTGCCGCATAGGCAGCTTAGAAA	ATCATCGCCTTTAATCAAAGCGAATTTAGAAT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TCGGGAAACTCGTTCTGGATTTGCCGCCTGAG
GTTACCTGCCGCATAGGCAGCTTAGAAA	TAAGAATTACTTCATCCGCAAAGTTAGGATTC
GTTACCTGCCGCATAGGCAGCTTAGAAA	GCAAGCGGATTTCATGCAAGCTATAAATCCGG
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGATGGTCGCCGTAGTGGAACAGACCCTGTTC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGTATCTCTGTGATCATCATTGCTCTGCCCCT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGTCCTATTTCGGTGAACAACCTCAATCCATT
GTTACCTGCCGCATAGGCAGCTTAGAAA	TGGGTGTTGGGGGCGTCGACCTCGCTGGTTTC
GTTACCTGCCGCATAGGCAGCTTAGAAA	TTGGATTGTTCGCCATAGCCTCGCGCATCCGA
GTTACCTGCCGCATAGGCAGCTTAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_017098.1\|WP_014454519.1\|503787_504840_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|185008
NC_017098.1\|WP_014454515.1\|498757_499735_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NC_017098.1\|WP_014454511.1\|493757_494150_-\|DUF1801-domain-containing-protein	unknown	unknown	gnl\|CDD\|378058
NC_017098.1\|WP_014454504.1\|481122_482145_+\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NC_017098.1\|WP_014454513.1\|496075_497083_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NC_017098.1\|WP_014454516.1\|499820_500804_+\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380478
NC_017098.1\|WP_041397454.1\|497247_498765_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224053
NC_017098.1\|WP_014454510.1\|489795_490377_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	pfam09618_cas6f_CAS-I-F	gnl\|CDD\|378224
NC_017098.1\|WP_014454505.1\|482252_483212_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NC_017098.1\|WP_014454508.1\|487857_488745_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
NC_017098.1\|WP_014454503.1\|480632_480923_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|316153
NC_017098.1\|WP_014454507.1\|486607_487861_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09735_cas8f_CAS-I-F	gnl\|CDD\|378220
NC_017098.1\|WP_014454502.1\|479943_480636_+\|hypothetical-protein	unknown	unknown	unknown
NC_017098.1\|WP_156810040.1\|502505_503756_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|212660
NC_017098.1\|WP_014454512.1\|494733_496041_+\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|180734
NC_017098.1\|WP_014454506.1\|483208_486595_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|187804
NC_017098.1\|WP_014454517.1\|500891_501908_+\|NAD(P)-dependent-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176188
NC_017098.1\|WP_014454501.1\|479401_479737_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225926
NC_017098.1\|WP_014454509.1\|488757_489789_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NC_017098.1\|WP_014454520.1\|504841_505294_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373322

Protein	Function_ID	Function_description	E-value
NC_017098.1\|WP_014454519.1\|503787_504840_-\|HAMP-domain-containing-protein	gnl\|CDD\|185008	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional.	1.71835e-43
NC_017098.1\|WP_014454515.1\|498757_499735_+\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	1.70137e-85
NC_017098.1\|WP_014454511.1\|493757_494150_-\|DUF1801-domain-containing-protein	gnl\|CDD\|378058	pfam08818, DUF1801, Domain of unknown function (DU1801). This large family of bacterial proteins is uncharacterized. They contain a presumed domain about 110 amino acids in length.	1.56493e-05
NC_017098.1\|WP_014454504.1\|481122_482145_+\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	2.49153e-28
NC_017098.1\|WP_014454513.1\|496075_497083_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	2.90634e-72
NC_017098.1\|WP_014454516.1\|499820_500804_+\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380478	cd01536, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of active transport systems that are members of the type 1 periplasmic binding protein (PBP1) superfamily. Periplasmic sugar-binding domain of active transport systems that are members of the type 1 periplasmic binding protein (PBP1) superfamily. The members of this family function as the primary receptors for chemotaxis and transport of many sugar based solutes in bacteria and archaea. The sugar binding domain is also homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR. Moreover, this periplasmic binding domain, also known as Venus flytrap domain, undergoes transition from an open to a closed conformational state upon the binding of ligands such as lactose, ribose, fructose, xylose, arabinose, galactose/glucose, and other sugars. This family also includes the periplasmic binding domain of autoinducer-2 (AI-2) receptors such as LsrB and LuxP which are highly homologous to periplasmic pentose/hexose sugar-binding proteins.	2.48391e-62
NC_017098.1\|WP_041397454.1\|497247_498765_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NC_017098.1\|WP_014454510.1\|489795_490377_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	5.60363e-72
NC_017098.1\|WP_014454505.1\|482252_483212_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	3.48247e-163
NC_017098.1\|WP_014454508.1\|487857_488745_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	2.18349e-149
NC_017098.1\|WP_014454503.1\|480632_480923_+\|transcriptional-regulator	gnl\|CDD\|316153	pfam13601, HTH_34, Winged helix DNA-binding domain.	3.72633e-24
NC_017098.1\|WP_014454507.1\|486607_487861_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	1.33016e-152
NC_017098.1\|WP_156810040.1\|502505_503756_+\|sugar-kinase	gnl\|CDD\|212660	cd07776, FGGY_D-XK_euk, eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases. This subfamily is composed of eukaryotic D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17), which catalyze the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. They belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Members of this subfamily are similar to bacterial D-XKs, which exist as dimers with active sites that lie at the interface between two large domains. The presence of Mg2+ or Mn2+ is required for catalytic activity.	4.32352e-50
NC_017098.1\|WP_014454512.1\|494733_496041_+\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|180734	PRK06855, PRK06855, pyridoxal phosphate-dependent aminotransferase.	0
NC_017098.1\|WP_014454506.1\|483208_486595_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|187804	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas3/Cas2 fusion; This protein includes both DEAH and HD motifs for helicase and N-terminal domain corresponding to Cas2 RNAse; signature gene for Type I and subtype I-F.	0
NC_017098.1\|WP_014454517.1\|500891_501908_+\|NAD(P)-dependent-alcohol-dehydrogenase	gnl\|CDD\|176188	cd05285, sorbitol_DH, Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	1.28205e-157
NC_017098.1\|WP_014454501.1\|479401_479737_-\|hypothetical-protein	gnl\|CDD\|225926	COG3391, COG3391, Uncharacterized conserved protein [Function unknown].	1.67033e-06
NC_017098.1\|WP_014454509.1\|488757_489789_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NC_017098.1\|WP_014454520.1\|504841_505294_-\|hypothetical-protein	gnl\|CDD\|373322	pfam14827, dCache_3, Double sensory domain of two-component sensor kinase. Cache_3 is the periplasmic sensor domains of sensor histidine kinase of E. coli DcuS. This domain forms one of the components of the two-component signalling system that allows bacteria to adapt to changing environments. The ability of bacteria to monitor and adapt to their environment is crucial to their survival, and two-component signal transduction systems mediate most of these adaptive responses. One component is a histidine kinase sensor - this domain - most commonly part of a homodimeric transmembrane sensor protein, and the second component is a cytoplasmic response regulator. The two components interact in tandem through a phospho-transfer cascade.	2.25273e-10

>NC_017098.1|WP_014454510.1|489795_490377_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MNYYSEITLLPGADIGLYQLWSKVFTQVHLRLVEFQNPDGNVPIGVDWPEYKADIPSLGTKLRIFSSTRETLEQFDLNVVLLRFSDYVKVSGIRSVPQNISSYVAYERVQKKQNPDRIARRRARRSNLDYTEALRAVAEKNAPVITLPYVQLISLSTKRKYSLFLAKRLTEEPGGNISFNSFGINKHSTVPSF
>NC_017098.1|WP_014454509.1|488757_489789_+|type-I-F-CRISPR-associated-protein-Csy3
MAKSKETMASVLAYEKKIVPSDARMYGTIWEARHSERKPLNIIEKSIRGTISNRLSTALKNDPSKIDAEVEKANLQKVDSCGLAMEQDTLCIEFTLKVLSGVENPSACNNVQFLETYQIAAQDYIARENFTELGKRYAVNIANGRFLWRNRFGADSVEIRVEQLGSDEHEEPMIFNAFSYSVKSFDTDDTDVQKLGNEIAKVLSGKVSHKLFRISAYAKVGLGQEVYPSEELVLDKGKGNKGKVLFDINGVAGMHSQKIGNAIRTIDTWYPEYADSTVGPIAVEPYGAVTTLGKAFRTPKNKSDFYTLFDNFSRGGKLASIEEEHYVMAVLVRGGVFGESSKE
>NC_017098.1|WP_014454508.1|487857_488745_+|type-I-F-CRISPR-associated-protein-Csy2
MKRLLIIPHLIVQNANAQSSPYTLGFPAMTAFLGATHAFQRILSKQYPEFQVKSTGVVCHNMELRTHKGYGDFVHSVINTANPITKDGKRPSFIEEPKCSLDITLIMEVDGMPLGSEEHKFQKTASEVLDSKMRIAGGDILAYQPMIYQSVDSEDPVTLSRFKRLLMPGYVLVERRDLMIQEMQDGNDALDALLNCMKIDHSCEQSEDGTVEWQSKRKYPGWLVPVAVGYQGVSELGRVSRQRDPTVQHRFAEAIVTLGEFVMPYRLKKVDSLLWHYESDQEKGLYFCTQTNNQK
>NC_017098.1|WP_014454507.1|486607_487861_+|type-I-F-CRISPR-associated-protein-Csy1
MSEEVRVFFAARREAWLKSPDQRKKIKNGVSEEELEQEADEKFHPAEWCAENARRAKSLSLVTHNPKFSHPDIKIKDVNVIQVTAQQKDDGYLRTGNCEYKSDAYGDAASLAVLKFLQLEMTDGRTVLEHFERSSEELRKEIGVSAGQFAEMREQFLNITMPKSKDTTSDLLKQVYFPVGDDYHLLSLITPGGLISVLKQRIDDVRFGNGVNEARDQKRNGKFSECGYADIPNLAVIGYGGTKAQNIGQLNLGNGGKATMLMTLPPALQDRKVYPPRTNFFRNCLRVNTVEEFFDSLDHLRAIDYNNASIRSAIEHWYKKIIDQIVAQAWAIRRECTGWSYDERYSAVPLYQKLWLDEARQSERDLSEDWQQSVIENMVQWIRMTYEKRKNMKGPKFDSTEIQFMTRLASESKEGLV
>NC_017098.1|WP_014454506.1|483208_486595_+|type-I-F-CRISPR-associated-helicase-Cas3
MIVTFISQCEKKALSRTRRVLDTYASRIGSRTWQTVITMDGLAAIKKHLRKTATKNTAVACHWMRGKTRTELLWVVGNRQQFDSEGVVPVHSTQRDVFSGLTESDWDLLPQIKIVAAISALFHDWGKASELFQSKLRPSDKRKEKVLGDPVRHEWVSCFLFAEFVRSCGSTDREWLDALSDGRLDEKKIIQSVQASEKTLIEKVRHVPADLPPLASVVLYILLTHHRLPVYRGSGRSQWKGVKRGSFKELLQIISYEWSYANYLETEDQRCRLPLCFSFPHGICTDSPAWMKQIKKWSQRALERYTSFSEIINSPGFRSLIHFSRLAVMLGDHIYSSQQADPSWKTDIPLYANTEKDNSLKQKLDEHLVGVMKQALKTAHLLPRLESSMDEARDVQSLKAAARPGTKYYWQDKAVEKILAWRTEQAELLKKQDQSFGFFTVNMASTGCGKTTANAKVMQALSRDCDSLRYILALGLRTLTLQTGDEYKERLGLDETELAVLIGSKAIATLHREWHNAQQNEDSEDTVEMSSESQETLLDDHIDFACDIPEGDLRTLLQTEKDRQMLFAPVLSCTIDHMMAATETTRGGRWILPFMRLMTSDLVIDEIDDFSGTDMIAVGRLVFLAGMLGRKVMISSATITPDIAEGYFHTYHQGWTTYTASRNANETVGCCWIDEFRTVTSTVQDSDSISASRNFANHHNHFIEKRVRSLRSQRNQKGARRVGQLIQCKDLLEIGSEVEREEALFERSAQTILSLHQDNCHTDPVTGKTVSFGCVRMANIDPCVSMTKYLLGFQWPEDVCVYAMAYHSRQVLLLRNEQERHLDSVLKCKTEEPRRAAFSNLVIRKQIEKNAAANIVFVLVATPVEEVGRDHDFDWAIIEPSSYRSIIQLAGRVRRHRSTVVQKPNIAILEFNRKGLLSEGDQPVFTRPGFETDSMLLNSHSMASLVNVRDMEKGIDAVPRISRNQELKPKDSLVDLEHNSIHCSLTHYKQVPGPETMHGWHHNSFWWLTGQAQQYNYAPFRAGESQIEICDIYTEDGNYFGEWEQRNKIWLDRELVYRIDRERDSDMGYERLWLHRDYRALLERREDQYGESPGKASGVFGRLTFPKRFEGSKLLYSEQFGLVENRRE
>NC_017098.1|WP_014454505.1|482252_483212_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MEYLNNLKAILHSKRANIFYLEKCRVLMKDGRVVYLTETKKENQYFNIPVANTTVILLGMGTSITQAAVRMLASAGVLLGFSGTGGTPLLMGAEVEWMTPQSEYRPTEYVQGWLSFWFDERKRLSVAKRFQEARIEYLVKVWGKDRDLQDHQFFCDEDDIQRSLEAFRKEISGANSVESLLSSEAQLTKRLYKAAAKRTGHGKFIREREAIDSANTFLNHGNYLAYGLAATCLWVLGIPHGFAVLHGKTRRGALVFDVADIIKDAIILPWAFICAQDKLKGQEFRQHCLIQFTKHRALEHVFELVKDVAISKGNMEEQV
>NC_017098.1|WP_014454504.1|481122_482145_+|WYL-domain-containing-protein
MSTPGQAGRRFASQAERRDQLEQLLLHSPVGYTQAELVARLQTSKATIHRDIQYLSMHLPVLEEGRRYRIDPAGYLHNVRLSMHELEALHLSARLFARVMKFPFPHASAALRKLADAQSRVSQALADQILQTAEDIDGFTSPIDYSRYRSVIEQLGRAMSESRPVLVSHYSARKQTEQRFTLFPITLEPHHEGRAVHLLAWDISTASEQFRTIKIERITRLELQPSAPQIASRIPRERLQQRLQHAWGIWSSDDPPQQVRLQFSAAVAQRVRETHWHHSMTLTDHPDGSLECRMQIAEPREMYPWIRGWGPDVQILEPEWLQQQHKEDIRAMARMYGEAE
>NC_017098.1|WP_014454503.1|480632_480923_+|transcriptional-regulator
MTGLLQDHSRLSIVSLLASSSVGELPFTSIREKTGLTAGNLSSHLRTLENAGLVHTTKQFQGRRPLTTIELTPAGRTALDQAISAMEEFVRAHRNQ
>NC_017098.1|WP_014454502.1|479943_480636_+|hypothetical-protein
MNPEQDDVRRLEADIAVIKDSIRAKNGFVRRMLAAPVLGWFFVGFGAACAVVPLVWEYALRQYRGAEALPTQVTAALIAGTVVVFAVLAFWKIAAFNRGARAVDSRYSWLDVMRDLTSHPVVLYQQVIMAGTAVAVVMAIRTGNAYLVPAALAAGLAMVFMLYAVAFLLNEYSFIIVWLSLFAAAVLFLPGIPPLIMAAVGFGGGFLLYGIYSITMAPHPASSTHGGNQA
>NC_017098.1|WP_014454501.1|479401_479737_-|hypothetical-protein
MVFDTTTHTPVHAEPRTSFGLDAHGVRATPDGSEIWMVNRATSDGIIIDPRTDAVIDYLPFVGESPDILDFSPDGRFAFVTLRGPATLSGPHANQEFSPGVAVLDTAQGRL
>NC_017098.1|WP_014454511.1|493757_494150_-|DUF1801-domain-containing-protein
MDSEIKTYNQQQEAGYKSICDLLSREIDRNLPEAEGKIWHSHPVWFLDGNPTVGYSKQKPGIRLMFWSGADFAEPGLNVIGKKFKDASIFYTDAAEVNTADLHRWLEKARDIQWDYKNLVKRKGRLERLK
>NC_017098.1|WP_014454512.1|494733_496041_+|pyridoxal-phosphate-dependent-aminotransferase
MRRQILHAGAGQLRYMIREIVQIAREIERLGQPVLWENIGDPVRKGESPPDWIKQLVGQAATEDMSYAYSDTQGEAATRGFLAERANGRLDGEAAGARITPDDILFFNGLGDAVSKLFGQLRPQARVIGPSPAYSTHSSAEAAHSGYEHLTYQLDPENGWLPDLQELENTIHYNPTIAGILIINPDNPTGVVYPRHILEGFVAIARRYNLFLICDETYAHVVYGGAQEVHLNQIIGDVPGIAMRSISKEFPWPGARCGWIEVYNRTADADFAGYVESILAAKRLEVCSTTLPQRVIPLVMGDARYAGHLGQRNREYESRAGEVCAALSGIPGVRVNRPQGGFFATPVFDPAMLPAAGRLEIANPGIRRLVEQRLPGAAADARFVYWLLGSTGICTVPLSGFCSRLPGFRMTLLESDPEVRAGMLDRLAAAIRSYG
>NC_017098.1|WP_014454513.1|496075_497083_-|LacI-family-DNA-binding-transcriptional-regulator
MSKKQTARKKSVTMQDIANETGVSITTVSHVINKTRHVNSETRSLVLDAMNRLEYSTRKTRKRPAAAEGILGVIVADIREDYYVALVKAIETIASENGLSILLCDSEMDPEKEEKNIHTILERDVSGMIIAPIDSRTFPRELRETSLPVVLVDRQYDEHNRTFVGINNFESSVMAYRHLQNKGCSRIGFIGYSEHVYTVRKRIIGYKASVVETTPAYQPQVLKLHYDKEDSFSRIARFITEHDFDGLICATSDLCYETISALHETHIRIPEDIQVITYDDNKWLDYLKYPVSVVSQPTAEIGAYAVEKLIQYIESPEDDPRIKTEVFFEVSIIDR
>NC_017098.1|WP_041397454.1|497247_498765_+|ATP-binding-cassette-domain-containing-protein
MEKQGSDYLLEVQGISKSFPGVKALDSIHFRLRPGTVHVLCGENGAGKSTFLKIMNGLHQPDQGEIRVHGEAVQIRHPLQARRLGIGMIFQELDYVPNFTVEQSLFLGEEPRNAIGGVNWKQIRRRTVELLQAEGLPYKPTTRLKDLTVSDIQMLEILKAVSSDTRILLMDEPTSAITDKEIDMLFAKIRQLRDKGVGIVYISHKLDEIFRIADEITVFRDGQHVGNAPAAELDKDRVIAMMVGRRLENIFPDKPSIEPGGVALELRNLSRGRVFQDVSLQLRAGEVVGMAGLVGAGRTEIARAIFGLDPYDSGEVLVHDVAPQRRNDVAAAISSGVAMLSEDRKRYGLVLSRSVKENASLLVLRKYFARWWNNARAENRDVRAVFKTLNVKTSSLSTIAGTLSGGNQQKVVLTKWLLKDQDVVILDEPTRGIDVGAKYEIYKIILELAAKGKAVLVISSELPELIGICDRLYVVAKGRITKELKRDEFSQETIMKYAAQGEADE
>NC_017098.1|WP_014454515.1|498757_499735_+|ABC-transporter-permease
MNKKIELGDVWQVIKSRFSIYLVLAAMVVIATIISPVFLSTRNITNIARQISVITIMAFAQTLVILAGMIDLSVGSVMALAGVLSVTAYVATGSLLTALAVGIIVGVLAAVVNGFFVTRLSVPPFIATLGMLTAARGIALLYTGGQNIYQIGDFVVLGQGRVFGLPTPIFFMIGVVILVWYLLNHTRLGRHIYAIGGNEEAARASGIKIGKVKMLTFMIAGALVGLSGVLFMSRVNAGLPNAGIGAELDTISIAVIGGTSITGGVGTAGGTLAGAFIIGILNNIMNLMGVQSYIQSVIRGLIIVLAVAYDTRARTRRKVQKAKKD
>NC_017098.1|WP_014454516.1|499820_500804_+|sugar-ABC-transporter-substrate-binding-protein
MRKLLIIGLSVVMMLALTGTVFARGQVEDGDMRIAYIARAQGDSFAAWLANAVVEEVETYDGVSVTVFDGQSRNELIADHIENAIVNQFDLILLQPLDSVAQVAPVREAIAAGLHVVTVNNMINDPTVPAIDADPIEQAAGNAELAVTQVPQNANVVVLMGPSGNMHSDQRRVGWQQYFFDERPDVTILDEQIAHWNKEEAMAIMEDWIQTYPQIDAVISMNDNMAAGAIEALIDAQGEENLPYVYGVDGTAEAALLIRDGLMTSTTLQSAYELAEVSVQLSYDILTGAVQVDYQTDREPVMIGAPLIIQDNAEEFIEMHRRAGNLR
>NC_017098.1|WP_014454517.1|500891_501908_+|NAD(P)-dependent-alcohol-dehydrogenase
MEALVLEKVNQIAIRDIVIDETLGPRDVRVKPVCIGICGSDVHYYLHGRIGDFVVKEPMVLGHEASGIVTEIGAEVTDLKVGDRVCMEPGIPDHNSEEYKLGIYNLDPAVRFWATPPIHGCMRESVVHPAQFTFRLPDNVSFAEGALVEPVAIGVQAAKKAQIQPGDSALVLGAGTIGIVTAMAAAASGCSNVYITDISAEKLDLVRERFGDRFTTVAHAQVGELHDAVDIVFEASGAAAAVLAMARYARPGGRIVLIGMTQDPVPVDIVGIEVKELTMYSIFRYAHVFDRTLQFISSGKIDVQPLVTHTYPFSESVAAYDFAASMPSDAIKVMIEKE
>NC_017098.1|WP_156810040.1|502505_503756_+|sugar-kinase
MAGRCATIFAYGTAPIWQSANTGIEAEHIRRCVGGRETVIRVSGSDSPLRFTGAVVRRVAARFPEVYAATSRISLLSSFLSGVLSGNPDVPIDWGNGSGMSLMDYRGRTWSRHLAAAVADGLPGGADGLLARLPGLDSPLAIAGSIAGYFVRRYGVNPACLVTIGSGDNPQSKVVTTQDLLSLGSSFVYMVDTAEPLVDLQGYANSMYDGAGRPFVFACRTNGAMVWDRVREIFGADYAAADAALAQSPVGSVLQLWQPRAESYPASPVIPNSAIESGQGDLAALYPAIVDSTLAIVRHYARGFEGGDKTGEPLAVTGGPSRSREILRRVAAIWNRPVYTVGDAGAAVGSALSAWQAVCQTDGSDAGLERLRTVLSNPGDLLQPEPEAADRMAADSTYIQQLEKQLSLWLMNGGDR
>NC_017098.1|WP_014454519.1|503787_504840_-|HAMP-domain-containing-protein
MRSTTEDHEWYLHRIPLRDFSGQEIGHILAMTDRSQMTTELARALQVAIGISLLLAAGALLTLFFIIQRAFRPLQQVVGIMAEMADGNLRISAHTDRSDETGRLLQAVDRTVQAMGGTIAEVHTIASQVNAGSDELSTTVQQLSDDSAQQASAVEEVSASIEEMEAADNATQTDKTARDAAAQAERGGESVRSTVQSMKDIVERIEIIQEIARNTNLLALNAAVEAARAGESGKGFAVVAAEVRKLAERSQTAAEEISEMSSASMKVAEETGQLFDSIVPAIQRTSELVQTISRSMQEQQSGTSQIRASVSQLDSSIQNNAAAAEQMASMAEELSAQATQLTDTIARFRT
>NC_017098.1|WP_014454520.1|504841_505294_-|hypothetical-protein
MRTIGLRGRVLIVVTAAVLLISGFQLLQQLRENRQQLAAANQQLFTQLEESWETSLQAELDALSMALHALTMNDELIELFAADERQQLYQNLQGFNQVLEDDYGIAQFQFHRPPAESFLRMHLPDVYGDDLSGFRATVVQANRRPGSRPG

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Crispr_ID: NC_017098_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017098_3

2022106-2022183

Orphan

Consensus_repeat	Method
CGCCGCGGGCTGAGCCACTGCGCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_017098_3

>merge|NC_017098|3|2022106-2022183|CRISPRCasFinder
TCCCGCGGGCTGAGTCGCCGCGGGCTGAGCCACTGCGCCCCCGCGGGCTGAGCCGCCACGGGCTGAGCCACTGCGCCC

>NC_017098|3|3|2022106-2022183|CRISPRCasFinder
TCCCGCGGGCTGAGTCGCCGCGGGC	TGAGCCACTGCGCCCCCGCGGGCTGAGC
CGCCACGGGCTGAGCCACTGCGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_017098.1\|WP_014455822.1\|2027129_2028023_+\|hypothetical-protein	unknown	unknown	unknown
NC_017098.1\|WP_041397215.1\|2022861_2023587_+\|hypothetical-protein	unknown	unknown	unknown
NC_017098.1\|WP_014455821.1\|2026636_2027068_-\|DUF2721-domain-containing-protein	unknown	unknown	gnl\|CDD\|378544
NC_017098.1\|WP_014455811.1\|2017907_2019338_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225121
NC_017098.1\|WP_014455818.1\|2024458_2024983_+\|hypothetical-protein	unknown	unknown	unknown
NC_017098.1\|WP_052318100.1\|2022261_2022807_-\|protease-complex-subunit-PrcB-family-protein	unknown	unknown	gnl\|CDD\|379569
NC_017098.1\|WP_014455809.1\|2015586_2016030_-\|arsenate-reductase-ArsC	unknown	unknown	gnl\|CDD\|319973
NC_017098.1\|WP_041397944.1\|2010963_2013006_-\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|223551
NC_017098.1\|WP_014455807.1\|2013097_2013784_-\|TIGR00266-family-protein	unknown	unknown	gnl\|CDD\|376704
NC_017098.1\|WP_014455808.1\|2013808_2015545_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341240
NC_017098.1\|WP_014455823.1\|2028076_2029303_-\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|319803
NC_017098.1\|WP_156809988.1\|2020640_2021651_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586
NC_017098.1\|WP_014455820.1\|2025707_2026538_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381299
NC_017098.1\|WP_014455805.1\|2010440_2010989_+\|peptide-methionine-(S)-S-oxide-reductase-MsrA	unknown	unknown	gnl\|CDD\|237597
NC_017098.1\|WP_014455804.1\|2009203_2010454_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|377314
NC_017098.1\|WP_014455810.1\|2016164_2017835_-\|EAL-domain-containing-response-regulator	unknown	unknown	gnl\|CDD\|238923
NC_017098.1\|WP_014455819.1\|2025003_2025693_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NC_017098.1\|WP_014455824.1\|2029435_2029948_+\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153228
NC_017098.1\|WP_169313567.1\|2019334_2020543_-\|alanyl-tRNA-editing-protein	unknown	unknown	gnl\|CDD\|225427
NC_017098.1\|WP_169313568.1\|2023595_2024462_+\|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl\|CDD\|369882

Protein	Function_ID	Function_description	E-value
NC_017098.1\|WP_014455820.1\|2025707_2026538_-\|aldo/keto-reductase	gnl\|CDD\|381299	cd19073, AKR_AKR3F2_3, Escherichia coli 2,5-diketo-D-gluconic acid reductase B (DkgB/YafB), Sinorhizobium meliloti isatin reductase and similar proteins. Escherichia coli DkgB/YafB (EC 1.1.1.346), also called 2,5-didehydrogluconate reductase (2-dehydro-L-gulonate-forming), or 2,5-DKG reductase B, or 2,5-DKGR B, or 25DKGR-B, is a founding member of aldo-keto reductase family 3 member F2 (AKR3F2). It catalyzes the reduction of 2,5-diketo-D-gluconic acid (25DKG) to 2-keto-L-gulonic acid (2KLG). Sinorhizobium meliloti isatin reductase is a founding member of aldo-keto reductase family 3 member F3 (AKR3F3). It is a aldo/keto reductase family oxidoreductase.	4.47356e-141
NC_017098.1\|WP_014455821.1\|2026636_2027068_-\|DUF2721-domain-containing-protein	gnl\|CDD\|378544	pfam11026, DUF2721, Protein of unknown function (DUF2721). This family is conserved in bacteria. The function is not known.	1.03949e-28
NC_017098.1\|WP_014455811.1\|2017907_2019338_+\|MFS-transporter	gnl\|CDD\|225121	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism].	1.39487e-76
NC_017098.1\|WP_052318100.1\|2022261_2022807_-\|protease-complex-subunit-PrcB-family-protein	gnl\|CDD\|379569	pfam14343, PrcB_C, PrcB C-terminal. This domain is found at the C-terminus of Treponema denticola PrcB. PrcB interacts with the PrtP protease (dentilisin) and is required for the stability of the protease complex.	2.48944e-16
NC_017098.1\|WP_014455809.1\|2015586_2016030_-\|arsenate-reductase-ArsC	gnl\|CDD\|319973	cd16345, LMWP_ArsC, Arsenate reductase of the LMWP family. Arsenate reductase plays an important role in the reduction of intracellular arsenate to arsenite, an important step in arsenic detoxification. The reduction involves three different thiolate nucleophiles. In arsenate reductases of the LMWP family, reduction can be coupled with thioredoxin (Trx)/thioredoxin reductase (TrxR) or glutathione (GSH)/glutaredoxin (Grx).	2.91517e-61
NC_017098.1\|WP_041397944.1\|2010963_2013006_-\|cation:proton-antiporter	gnl\|CDD\|223551	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	5.12552e-55
NC_017098.1\|WP_014455807.1\|2013097_2013784_-\|TIGR00266-family-protein	gnl\|CDD\|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	3.33606e-78
NC_017098.1\|WP_014455808.1\|2013808_2015545_-\|AMP-binding-protein	gnl\|CDD\|341240	cd05914, LC_FACL_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL). The members of this family are bacterial long-chain fatty acid CoA synthetase, most of which are as yet uncharacterized. LC-FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.	1.86112e-140
NC_017098.1\|WP_014455823.1\|2028076_2029303_-\|phosphoserine-phosphatase-SerB	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.85282e-100
NC_017098.1\|WP_156809988.1\|2020640_2021651_+\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	4.25634e-38
NC_017098.1\|WP_014455805.1\|2010440_2010989_+\|peptide-methionine-(S)-S-oxide-reductase-MsrA	gnl\|CDD\|237597	PRK14054, PRK14054, peptide-methionine (S)-S-oxide reductase.	1.28245e-96
NC_017098.1\|WP_014455804.1\|2009203_2010454_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|377314	pfam04339, FemAB_like, Peptidogalycan biosysnthesis/recognition. FemAB_like is a family of both baterial and Viridiplantae proteins with responsibility for building interpeptide bridges in peptidoglycan. Such a function is feasible for bacteria but less likely for the plant members of this family. Perhaps the plant-members are using homologous proteins to recognize bacterial peptidoglcans as part of their innate immune system.	3.0876e-119
NC_017098.1\|WP_014455810.1\|2016164_2017835_-\|EAL-domain-containing-response-regulator	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	2.37229e-67
NC_017098.1\|WP_014455819.1\|2025003_2025693_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	3.06974e-106
NC_017098.1\|WP_014455824.1\|2029435_2029948_+\|type-1-glutamine-amidotransferase	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	3.34773e-62
NC_017098.1\|WP_169313567.1\|2019334_2020543_-\|alanyl-tRNA-editing-protein	gnl\|CDD\|225427	COG2872, COG2872, Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain [General function prediction only].	6.39301e-50
NC_017098.1\|WP_169313568.1\|2023595_2024462_+\|SMP-30/gluconolactonase/LRE-family-protein	gnl\|CDD\|369882	pfam08450, SGL, SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.	5.36595e-80

>NC_017098.1|WP_156809988.1|2020640_2021651_+|OmpA-family-protein
MKQNAKKFMILIAIEVALLLVIAIFILVMQSQGRVYARRPLVLLERPTVTYLVGEAQVQNPDATWQPVAIGDTLRAGSAVRTLGESRLDLRFSDGTAVRLEEHTALHIARLQADETELRIDQGTVYGRFRKQFLEQEYRLRGGGAVAGVRGTRLSFTVAEDHARIDVLSGLVDIWTAENPDQRIELFSNHRTRVFSGQIPEQPTPIPASERSALEHLVRNIQQEQVLLVSSTIQFASNTDRIMPASLPELEWVVQELQDHPYRIRIDGHTADVGTRDAMQQLSLQRAERIREYLIEQGIAPNRLQVRGFGATRPLTDNDTPEGRAINRRVEFIITD
>NC_017098.1|WP_169313567.1|2019334_2020543_-|alanyl-tRNA-editing-protein
MSAQRTPQMLFYDNQYLKTSTARVVAARAVDAAVAVLELDQTLFYPEGGGQPADRGTIAGMELLDVQKGEDGAVLHTVRVASDTLPAPGSEVRLELNWAHRFAYMQQHSGQHLLSAMLKRTADAGTVSVRQGSETTTIEVDREQLSADQLGQAVRAANAAIQQNLPITAEWVAHTRINQQELRRPTSITGQVRLVRIQDTDCVACAGVHLSSTGELGVIRLVGSERIRGRLRLQFLIGQRAVEEYLYLGEMASDLVQRFSTPVTQLHQQILQLEEKQLELKQELAALQLAQAETISRRIAANGPGELLQDGDPFPEVARQLGKLASTPRLVLAPATAGLRWAMVLPEGSREDVARFMDGFFAERWKGGGKPPLFQGVVAGVEAADPCVQHALAAFPGPAAAD
>NC_017098.1|WP_014455811.1|2017907_2019338_+|MFS-transporter
MTRLFVQGERSLRFRNIAAYGSGDIFGGGATVLIGLYFFFFLTNNVGLSPLAAGTVFGIGKLIDAVTDPLMGYISDITRSRFGRRRIYFLAAIGPIWVSFFLLWLPFGQAPLLLRFIYYTVCYILFSLVYTLVMVPYSALNAEISRAESNRIRLAGSRMVFTQLVTLLAILIPNWLIDLLDIQGYYTMGLVFATLFALPWVFVFLGTWELPYKQPVGGPGFATYFARFTAILRNRTARSHMLMHAASYAAIDILMVLAVFFFTHYLGAPQQIYHLALAVMIITMCMMLPVYYALSRIVSVRLLYAVAMTWWAVGLVGGYYAMQPEHHWSSYLAITAFLGVGTAGGMLMPWTIFPMVTDVGEYFSGENRAGMYAGMLTLTRKLVQGAIVMPLVGISLHSIGYMPQVFPQAQATAIGLQRIFFLAPIGCILIGLLAVLRLPLTSRRAEVLSRTLHARRSGADETATPAADIVLLQKLR
>NC_017098.1|WP_014455810.1|2016164_2017835_-|EAL-domain-containing-response-regulator
MKHAHTPVLLIVDDSASSRKVLREVLRDLPVEIVEENNGRSGAERALQILPDLILMDYRMPVMDGPEAVAQIRSHQLAARIPILMITGETASDKMLSSFQSGVLDFIHKPFDPVQLKAQVESYLRLAEINRRFVLATMDRVTERPNMMALQEDVDDEGGCNPLLFLRSKEVAAVRRLYGAEIGDQLERSVCARIEDIAGKMFRVACHLYVIDRGSLVLRFIDPDGYIDSESAPTIMRTFEHHLGEEEFEVENLLFTCEFRMVVSLPGPTVLDDGMVAFEDGRDAIRGPSMVFAGEVVAQRRETIHANLQTLTTIRNSLREDQVLAYAQPLVDLRSGNTIGYECLMRIRDAAGLVLTPYQFLDVAKSSRYYPDMTLRMLDQARRVFSDSSCKCSLNYSIVDVENKRVVERTIALLKEYPRFARNLIIELVEQEDGSDFNLIGGFIQQLRDCGAQVAIDDFGSGYSNLRRLVELDFTYVKIDGSLVRDIVTSERSQQLVNWVVDFARQADIELIAEFVETEEHRQRLLEMGVTLGQGYLYGRPVALTDILAGQQHSRC
>NC_017098.1|WP_014455809.1|2015586_2016030_-|arsenate-reductase-ArsC
MSAKARILVICIHNSSRSQMAEEYLRLFGGDLFEVESAGLEPGNLNPVVVELLKDDGIEIEGKATRSVFDLHRQGRAYDYVIAVCDPEAKERCPIFPAEKQRLHWPFPDPSAVKGSFEQRLVAVRPIQQEIRDKVLDFVQEYRDSQS
>NC_017098.1|WP_014455808.1|2013808_2015545_-|AMP-binding-protein
MSEYQVRTIPDILKRSLELYAGHPALSFVDDDPLTFRDVDELSRRLGLGLRSLGVKPGDHVAILSENIPNWGVAYLAIARIGAVVVPILPDFNSTEVGNILRHAEVQTVLVSSRQFPKLAELQQSGELQAVLLESLELVPRDAVVQADGSLTPQGTSVLGAAEDSADVDTDPETTAAIIYTSGTTGNSKGVMLSHTNIVSNVEASRKIPDIEAGQSMLSLLPLSHTYECTLGFLVPLASGACVYYLGKPPSPSILMPALQKIRPHLMLAVPLFIEKIFRVRVLPQLTGKFALRMLYGIRPIQKLLHKAAGRKVYDLFGGRLHFFGIGGAGLAPDVERFLRDAGFPYAIGYGLTETSPLVAGSGPKETTFHAIGPVVEGVQVRLDNQFGGRNEGEVQVLGPNVMQGYYKDPERTAEVFTEDGWFRTGDIGHLSSAGVLSLRGRIKNMLLGPSGENIYPEEIEAVINEKPYVEESLVTQKGDQLVAMVYLNYEALLEHVAAMHANIKDWHSVVQGNVKDGADQIKQGIASFKSDIDGYLDELRRKINSELNMFSKLADIVPREEPFEKTPTMKIKRYLYT
>NC_017098.1|WP_014455807.1|2013097_2013784_-|TIGR00266-family-protein
MQYTILGSSMPLLECTLNAGEKVLSQPGAMKYMDYGVVMKTGIQGGISGFFKRTLSGESGFMSTFEAARSGQRIAFGHTYPGSIIPIDVAHSDIICQKRAFLACTEGVTFDIAIQRRLGSGFFGGEGFIMQRLGGTGTAFAEIDGETVEMQLEPGQKIQIETGAVAMFEATVDMNIEMVKGISNVFFGGEGLFLTTLTGPGKVWLQTMSVQRLASEIYPYLPASRKNS
>NC_017098.1|WP_041397944.1|2010963_2013006_-|cation:proton-antiporter
MMVLVLQIGIIIFAGYIGARFARRFRFPTILGELIAGILIGPFLFGRIPLPGFPFGLFQHSGGSVAVSPELFGFAMVASIVLLFLSGLQTDLKLFLRFAVKGSLVGIGGAAVSLLAGLYIGSLVLDGQWLHPSSFFLGVVAIATSVDITARILSDRRKMASPEGVTILAASVIEDVIGITLLAVLIGIDTFVGDAGVAYGAIMGVAVRALMVWLGFMGLGILLAQRISRLLKFEPNHSQIAVLALGMALVVAGLFETAGLAMIIGAYVVGISLSNTDLAYVIQEKIEVIHHFFDPIFFTVMGMIINLELLISLPVLGFGFLFGIIAIAAKVVGCGVPAYAAGFTGTGSLRISLGMMPRGEVALIIAGIGISTGLIDDMLFGIVILMTLITTIAAPPFFSRAISSKRRGTRAEVERSENVPTDFEFGSRQLTDFLLGDLLQTMRNEGFYIHAAEMEQRMYHMRKEMVYITLMATDRSLHFSSAKEDVTFINNLVYESILTLQNRVDHLRTISKPVELQRTLVEKDNRTTVNWYQVLDIDCISLKLRSREKEAIITELVEVLQRAGKLNDRDAVLRAVIEREKSMSTGMQHGIAIPHGRSEGANELCVAVGIAPQGVDFASLDGKPTKLVFLIVSPERDPGPHLQVLSGIAGVLNSDEAVEAAAVSPSRADLISFMVQNSRH
>NC_017098.1|WP_014455805.1|2010440_2010989_+|peptide-methionine-(S)-S-oxide-reductase-MsrA
MATHDYAVLGGGCFWCLEAAFNRLPGVTGVISGYAGGETTNPGYEEVCSGSTGHAEVVKIEFNPELITFRQLLEFFWQVHDPTTLNRQGQDRGTQYRSIILYHSPDQLHEATTSRHALDQSGRYPHPSVTEIIPLEKFYPAEEYHQRYFERNPNAGYCRAVIAPKLEKVFSVPGVSAWSSEP
>NC_017098.1|WP_014455804.1|2009203_2010454_+|GNAT-family-N-acetyltransferase
MDTDLNGLWLQLHRSIHEIPRADWQRLAVTASPLMQWDWLAALEDSGSVSAETDWAPRHAAVRDADGVLIAAAPFYRRDKSSAGEFVFDFAWIDAAEQLGFAYFPKLVGMSPATPIPAFEILMDTSWCQHHQIASDRLSGHVLQRIREQALQEGIASIHLQFVSPSLCATAAGSGFQEWRHAGFEWHNRGYRDWDHYLEHLTKDRRRTARRERRRLREQGVVTEVRQGSTIPHSWLSLMYRYYRNTTDQFGPWAARFLRKDFFLRLHEAAGEHLVFVAAFLTDTNEADQTSVLHDAEPVALAMLLSNGSELMGRYWGCSQQLPYLHFECCYYTPIEWAIQHGISRFNPGMGGEHKIHRGFEGARHFSQHWFADQRMALLFAGNIHQFNDFTQQELAAASQLSALYTLRKGDGDGNT
>NC_017098.1|WP_052318100.1|2022261_2022807_-|protease-complex-subunit-PrcB-family-protein
MKMRILMAIVLLGLLLIGVNGCATSVPADTGETAAVDEQNSVPVPQISPVAPEYCLERVCVLSSRAGHTRRSRSTVRARSRAAWQGLAGDPGLEDLLPGYEQYLEQELDFDRDAIVAVFAGERSTGGYSLELDRVERSETTITLHIRENTPAADAMVTQALTYPALVAVIHDAPAEILIEY
>NC_017098.1|WP_041397215.1|2022861_2023587_+|hypothetical-protein
MSFVISVYTREGIVMAADSRITFNMERTNGGTTIQHVAVGISDANRKLFRTAAGIGISVYGAAAVGGIPIAGYIDSFLEQIDSEKKPPAPHAVAHKLNEYFQEFESVPETQFHVAGYHTGTAPPDPQVWHVDLKHNSVQQKNPEDKQGATWGGEADIITRLLAPVATLASPGVIQSELPYQRIPFEFFTLQDAIDFSIFAVRSTIEAIRFMPRPKTVGGPIDILAITPKDSRWIQHKELHA
>NC_017098.1|WP_169313568.1|2023595_2024462_+|SMP-30/gluconolactonase/LRE-family-protein
MSPVHCRLGEGIIRDAERGCIWWVDIEGQLLHRSSYDGNHYSSLEFDQKVSMIALSTHHTLLVGLEREIREIDEHGHRIRSTAFEPDCAHTRANDGKVGPDGALWIGSMSSRMRSGEAALYRLDQDFQLRTVLTGVTVSNGMGWSPDGTCMYYIDTTTRRIDAFSFDPAGDGMIPQSRHCITAIPPELGWPDGMAVDSQGNLWVAMYDGSCITVWDPADGHLLDRIDLPVRRITSLAFGGDALCDLYITTAAADSAGEQQDLPLSGRLLHLTAQQPGLPGYLFGRRQE
>NC_017098.1|WP_014455818.1|2024458_2024983_+|hypothetical-protein
MNPITRHETPWLIVSGLVTVLLLSLMQTTFPIPDTELRPDAARIIELHSHLDETQIAQYRWVRWLDMLFPAAYAVFFGLSLRRLVRRSRTVGQPATTGNRWRLLPLLPLAAAGFDYMENILLMRSLALHPDPGWAAAAAGWFTLCKWTLLLLLTAAAALGSGLAAVRRRSRRSG
>NC_017098.1|WP_014455819.1|2025003_2025693_-|ABC-transporter-ATP-binding-protein
MAIVSLQDVHKIYPLGKTSVHAIQGVSFDIQEGDFISIAGPSGSGKSTILNLLGCIDVPTDGSVVIDSHNTRTLSDREITDLRHRFIGFIFQSFNLVPVLNVYENIEFPLLLGKNSRSRAERRDWIDHLIDEVGLGEWRTHRPNELSGGQRQRVAIARALATRPRVVLADEPTANLDSKTGEKIIELMKKINRDQGTTFIFSTHDATIVDIADHVIRLLDGRIVREERR
>NC_017098.1|WP_014455820.1|2025707_2026538_-|aldo/keto-reductase
MKQIELLSGYSIPQLGMGTWQLNGETCSTAVAAAIELGYRHIDTAFAYENHREVAQGIQQAGYPREELFLTTKIPLGKQRPEQIMTFGSRMLDELEVDYVDLLLIHWPDKKVPFAETLSAMKELVDKGSVRSIGISNFNSRITAEAADASPLPVVTNQVEFHPFLYQRELLQVCRERGIVVTAYSPLARGEVVRDERLQKIAERYETNAASVAIAWLMQKGIVVIPKAASTEHLQSNLAAADLEIAPEDIASIDSFEDFRRIINGNFKHYPFDEEM
>NC_017098.1|WP_014455821.1|2026636_2027068_-|DUF2721-domain-containing-protein
MQDFSLTFSTPGLLFPAISLLFLSFTNRFISYAALVRGLHDQWRQNCDPAISRQIENLRRRMRLIRLTQMSGTISLLLCTLSMIFLLVPGGILPWVMFAGALVFMAVALIVLALEVAISMHAIELQLDDMQSPAEAGGCVDQD
>NC_017098.1|WP_014455822.1|2027129_2028023_+|hypothetical-protein
MKSRATALLMLVVILCGITAAVFGIWSGPTGDSFRVESVRGQDVEIYGRGLYQLDSAFRAPILIGTDMVTLVLAIPLLITALIWSSAGTLRARMFAVGILAYFLYLSSSLAFGVMFNRLMPLYIVYFSASLFAFIGALRSIDLQQLDYNLSPYLPRRTIAGFLFLAGLSLTVWLAELIPAAAGGTVPPHLGAYTTEITHVIDLGVLLPLALLAAWLLLRRNPLGYLIAGPMLALNALIGPVVIAQTVVQRLHGVAITPMEFTLFVLPFAAMSLLAALLWAILLRGTTGDSESTGTVA
>NC_017098.1|WP_014455823.1|2028076_2029303_-|phosphoserine-phosphatase-SerB
MAHTHELFLITLFGDDKPGITSHFTAIFAEYDVNILDIGQSVIHNTLSSGFLIEVPAGTDSAEVLKELLYAGYKIGVHVKFQPVSAESYDGWVESQGKDRYIISLLGRKLTARQIAAVTRIIYDQGLNIDVISRLSGRVPLEGPAANGKASVEISVRGQARDLQAMKAAFLQTAGEQGIDIAFQKDNIYRRNRRLVCFDMDSTLIQTEVIVELARRAGVGDEVHRVTESAMRGEIDFAESFRQRIALLAGLDESVLQEVAEQLPLTEGVERLVGTLHQLGYKTAILSGGFSYFGQYLQKLLGFHYVYANELEIQDGKLTGRHLGPIVDGQKKAEYLQAIAERENITLEQVIAIGDGANDLPMLELAGLGIAFQAKPLVRENADHAISTMGLDGVLYLLGFRDRELLEA
>NC_017098.1|WP_014455824.1|2029435_2029948_+|type-1-glutamine-amidotransferase
MKIAMAIGPGFEDLEHWAVYMRMAELGAQIVTVGARAGEVYTAKSGGLTAQADTTANTLQADELTALLIPGGWAPDKLRRDTALLELIRSMDAAGKLLGFICHAGWVAASAGIVRGRKAAGSLGIKDDMENAGAEWVDQPALRDGNIVWGRVVADIPAYNRLLAETLTGN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_017098_3	3.1\|2022131\|28\|NC_017098\|CRISPRCasFinder	2022131-2022158	28	NC_017098.1	2022169-2022196	0	1.0

1. spacer 3.1|2022131|28|NC_017098|CRISPRCasFinder matches to position: 2022169-2022196, mismatch: 0, identity: 1.0

tgagccactgcgcccccgcgggctgagc	CRISPR spacer
tgagccactgcgcccccgcgggctgagc	Protospacer
****************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_017098_2	2.4\|490691\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	490691-490722	32	MG945579	UNVERIFIED: Microviridae sp. isolate 3609-1602, complete genome	3544-3575	4	0.875
NC_017098_2	2.4\|490691\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	490691-490722	32	MG945316	UNVERIFIED: Microviridae sp. isolate 1527-1801, complete genome	3280-3311	4	0.875
NC_017098_2	2.4\|490691\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	490691-490722	32	MG945344	UNVERIFIED: Microviridae sp. isolate 2418-1801, complete genome	3278-3309	4	0.875
NC_017098_2	2.4\|490691\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	490691-490722	32	MG945806	UNVERIFIED: Microviridae sp. isolate 4968-1801, complete genome	3244-3275	4	0.875
NC_017098_2	2.4\|490691\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	490691-490722	32	MG945524	UNVERIFIED: Microviridae sp. isolate 2044-180101, complete genome	3302-3333	4	0.875
NC_017098_2	2.4\|490691\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	490691-490722	32	MG945712	UNVERIFIED: Microviridae sp. isolate 1921-1801, complete genome	3285-3316	4	0.875
NC_017098_2	2.4\|490691\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	490691-490722	32	MG945612	UNVERIFIED: Microviridae sp. isolate 4528-1801, complete genome	3264-3295	4	0.875
NC_017098_1	1.1\|168857\|27\|NC_017098\|CRISPRCasFinder	168857-168883	27	NC_002143	Comamonas testosteroni PtL5 cryptic plasmid pPT1, complete sequence	12103-12129	5	0.815
NC_017098_3	3.1\|2022131\|28\|NC_017098\|CRISPRCasFinder	2022131-2022158	28	NZ_CP022424	Vitreoscilla filiformis strain ATCC 15551 plasmid pVF1, complete sequence	279486-279513	5	0.821
NC_017098_3	3.1\|2022131\|28\|NC_017098\|CRISPRCasFinder	2022131-2022158	28	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	559049-559076	5	0.821
NC_017098_3	3.1\|2022131\|28\|NC_017098\|CRISPRCasFinder	2022131-2022158	28	NZ_CP023713	Rhodococcus ruber strain YC-YT1 plasmid unnamed2, complete sequence	60784-60811	5	0.821
NC_017098_1	1.1\|168857\|27\|NC_017098\|CRISPRCasFinder	168857-168883	27	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	880158-880184	6	0.778
NC_017098_1	1.1\|168857\|27\|NC_017098\|CRISPRCasFinder	168857-168883	27	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	226949-226975	6	0.778
NC_017098_1	1.1\|168857\|27\|NC_017098\|CRISPRCasFinder	168857-168883	27	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	452145-452171	6	0.778
NC_017098_1	1.1\|168857\|27\|NC_017098\|CRISPRCasFinder	168857-168883	27	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	596467-596493	6	0.778
NC_017098_3	3.1\|2022131\|28\|NC_017098\|CRISPRCasFinder	2022131-2022158	28	NZ_KR152226	Micrococcus sp. MG-2010-D12 plasmid pJD12, complete sequence	9383-9410	6	0.786
NC_017098_1	1.1\|168857\|27\|NC_017098\|CRISPRCasFinder	168857-168883	27	NZ_CP040995	Klebsiella pneumoniae strain FDAARGOS_775 plasmid unnamed3, complete sequence	92802-92828	7	0.741
NC_017098_2	2.15\|491351\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491351-491382	32	MT840188	Bacteriophage sp. contig_37 genomic sequence	1287-1318	7	0.781
NC_017098_2	2.30\|492251\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	492251-492282	32	NZ_CP018459	Klebsiella pneumoniae strain Kp_Goe_39795 plasmid pKp_Goe_795-4, complete sequence	4041-4072	7	0.781
NC_017098_2	2.31\|492311\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	492311-492342	32	MN693824	Marine virus AFVG_250M380, complete genome	15188-15219	7	0.781
NC_017098_2	2.31\|492311\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	492311-492342	32	MN694245	Marine virus AFVG_250M381, complete genome	15040-15071	7	0.781
NC_017098_2	2.33\|492431\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	492431-492462	32	NC_041925	Proteus phage VB_PmiS-Isfahan, complete genome	3134-3165	7	0.781
NC_017098_2	2.33\|492431\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	492431-492462	32	MG575420	Proteus phage vB_PmiP_RS10pmA, complete genome	40296-40327	7	0.781
NC_017098_2	2.36\|492611\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	492611-492642	32	NZ_CP032676	Rhodococcus rhodochrous strain ATCC BAA870 plasmid pNit, complete sequence	22004-22035	7	0.781
NC_017098_2	2.42\|492971\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	492971-493002	32	NZ_CP049364	Acinetobacter baumannii strain ATCC 17978 plasmid pAB1, complete sequence	19834-19865	7	0.781
NC_017098_2	2.42\|492971\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	492971-493002	32	NZ_CP040048	Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence	104928-104959	7	0.781
NC_017098_2	2.3\|490631\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	490631-490662	32	NC_013859	Azospirillum sp. B510 plasmid pAB510e, complete sequence	372016-372047	8	0.75
NC_017098_2	2.11\|491111\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491111-491142	32	CP001771	Spirosoma linguale DSM 74 plasmid pSLIN02, complete sequence	98431-98462	8	0.75
NC_017098_2	2.16\|491411\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491411-491442	32	NC_021289	Burkholderia insecticola plasmid p1, complete sequence	411603-411634	8	0.75
NC_017098_2	2.18\|491531\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491531-491562	32	AP018361	Lactobacillus phage T25 DNA, complete genome	35779-35810	8	0.75
NC_017098_2	2.18\|491531\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491531-491562	32	MN830258	Lactobacillus phage JNU_P9, complete genome	10929-10960	8	0.75
NC_017098_2	2.19\|491591\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491591-491622	32	NZ_CP007214	Burkholderia plantarii strain ATCC 43733 plasmid bpln_1p, complete sequence	29757-29788	8	0.75
NC_017098_2	2.19\|491591\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491591-491622	32	NZ_CP022727	Erwinia persicina strain B64 plasmid pEP2, complete sequence	108450-108481	8	0.75
NC_017098_2	2.19\|491591\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491591-491622	32	NZ_CP010410	Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence	53978-54009	8	0.75
NC_017098_2	2.20\|491651\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491651-491682	32	NC_047988	Microbacterium phage Metamorphoo, complete genome	53805-53836	8	0.75
NC_017098_2	2.21\|491711\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491711-491742	32	MK765583	Tortoise microvirus 33 isolate 33_SP_127, complete genome	3458-3489	8	0.75
NC_017098_2	2.21\|491711\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491711-491742	32	MG945317	UNVERIFIED: Microviridae sp. isolate 1554-180101, complete genome	1849-1880	8	0.75
NC_017098_2	2.31\|492311\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	492311-492342	32	NZ_CP029776	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed2, complete sequence	167702-167733	8	0.75
NC_017098_2	2.31\|492311\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	492311-492342	32	NC_015169	Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence	103894-103925	8	0.75
NC_017098_2	2.41\|492911\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	492911-492942	32	HQ634175	Cyanophage P-RSM1 genomic sequence	24475-24506	8	0.75
NC_017098_2	2.47\|493271\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	493271-493302	32	NC_020303	Corynebacterium halotolerans YIM 70093 = DSM 44683 plasmid pCha1, complete sequence	27888-27919	8	0.75
NC_017098_2	2.1\|490511\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	490511-490542	32	MN693620	Marine virus AFVG_250M617, complete genome	30930-30961	9	0.719
NC_017098_2	2.9\|490991\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	490991-491022	32	NZ_LT960613	Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600 plasmid P, complete sequence	56103-56134	9	0.719
NC_017098_2	2.11\|491111\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491111-491142	32	NZ_CP020716	Cnuibacter physcomitrellae strain XA(T) plasmid unnamed1, complete sequence	149270-149301	9	0.719
NC_017098_2	2.16\|491411\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491411-491442	32	CP006879	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602b, complete sequence	391702-391733	9	0.719
NC_017098_2	2.19\|491591\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491591-491622	32	MK494124	Mycobacterium phage Kristoff, complete genome	33709-33740	9	0.719
NC_017098_2	2.19\|491591\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491591-491622	32	KM101120	Mycobacterium phage Trike, complete genome	32617-32648	9	0.719
NC_017098_2	2.19\|491591\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491591-491622	32	MH001459	Mycobacterium phage KittenMittens, complete genome	32609-32640	9	0.719
NC_017098_2	2.19\|491591\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491591-491622	32	MN586038	Mycobacterium phage WalterMcMickey, complete genome	33271-33302	9	0.719
NC_017098_2	2.19\|491591\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491591-491622	32	MN807247	Mycobacterium phage Chupacabra, complete genome	33342-33373	9	0.719
NC_017098_2	2.19\|491591\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491591-491622	32	MF773750	Mycobacterium phage OKCentral2016, complete genome	33058-33089	9	0.719
NC_017098_2	2.19\|491591\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491591-491622	32	NC_021307	Mycobacterium phage Severus, complete genome	32608-32639	9	0.719
NC_017098_2	2.19\|491591\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491591-491622	32	NC_041982	Mycobacterium phage Twister, complete genome	33271-33302	9	0.719
NC_017098_2	2.19\|491591\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491591-491622	32	JX307704	Mycobacterium virus Goose, complete genome	33155-33186	9	0.719
NC_017098_2	2.19\|491591\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491591-491622	32	NC_023609	Mycobacterium phage RhynO, complete genome	33512-33543	9	0.719
NC_017098_2	2.19\|491591\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491591-491622	32	MT522002	Mycobacterium phage Topanga, complete genome	33360-33391	9	0.719
NC_017098_2	2.23\|491831\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491831-491862	32	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	127707-127738	9	0.719
NC_017098_2	2.42\|492971\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	492971-493002	32	NZ_CP007449	Yersinia enterocolitica LC20 plasmid plasmid1_80K, complete sequence	55242-55273	9	0.719
NC_017098_2	2.7\|490871\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	490871-490902	32	NZ_CP041355	Pseudomonas aeruginosa strain AZPAE15042 plasmid pIHMA87, complete sequence	4511-4542	10	0.688
NC_017098_2	2.11\|491111\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491111-491142	32	LT599585	Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid	209778-209809	10	0.688
NC_017098_2	2.16\|491411\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491411-491442	32	NZ_LR594668	Variovorax sp. SRS16 plasmid 3	193543-193574	10	0.688
NC_017098_2	2.16\|491411\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491411-491442	32	NZ_CP013523	Rhizobium phaseoli strain R744 plasmid pRphaR744a, complete sequence	111947-111978	10	0.688
NC_017098_2	2.16\|491411\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491411-491442	32	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	884948-884979	10	0.688
NC_017098_2	2.16\|491411\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491411-491442	32	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	960856-960887	10	0.688
NC_017098_2	2.16\|491411\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491411-491442	32	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	960856-960887	10	0.688
NC_017098_2	2.19\|491591\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491591-491622	32	NZ_CP013369	Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence	176977-177008	10	0.688
NC_017098_2	2.19\|491591\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491591-491622	32	NZ_CP011920	Burkholderia cenocepacia strain ST32 plasmid pBCEN1232, complete sequence	99262-99293	10	0.688
NC_017098_2	2.21\|491711\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491711-491742	32	MG945267	UNVERIFIED: Microviridae sp. isolate 3270-1711, partial genome	3773-3804	10	0.688
NC_017098_2	2.25\|491951\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491951-491982	32	NZ_CP040842	Leptospira weilii strain CUDO6 plasmid pDO6, complete sequence	29012-29043	10	0.688
NC_017098_2	2.25\|491951\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491951-491982	32	NZ_CP040845	Leptospira weilii strain CUD13 plasmid pD13, complete sequence	37154-37185	10	0.688
NC_017098_2	2.46\|493211\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	493211-493242	32	NZ_CP040842	Leptospira weilii strain CUDO6 plasmid pDO6, complete sequence	29012-29043	10	0.688
NC_017098_2	2.46\|493211\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	493211-493242	32	NZ_CP040845	Leptospira weilii strain CUD13 plasmid pD13, complete sequence	37154-37185	10	0.688
NC_017098_2	2.11\|491111\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491111-491142	32	NZ_CP014598	Yangia sp. CCB-MM3 plasmid unnamed2, complete sequence	49232-49263	11	0.656
NC_017098_2	2.12\|491171\|32\|NC_017098\|PILER-CR,CRISPRCasFinder,CRT	491171-491202	32	NZ_CP039694	Agrobacterium larrymoorei strain CFBP5473 plasmid pTiCFBP5473, complete sequence	224548-224579	11	0.656

1. spacer 2.4|490691|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MG945579 (UNVERIFIED: Microviridae sp. isolate 3609-1602, complete genome) position: , mismatch: 4, identity: 0.875

ctgtggtgtcatctggcattattaacaacaag	CRISPR spacer
aattggtgtcatctggcaatattaacaacaag	Protospacer
   *************** *************

2. spacer 2.4|490691|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MG945316 (UNVERIFIED: Microviridae sp. isolate 1527-1801, complete genome) position: , mismatch: 4, identity: 0.875

ctgtggtgtcatctggcattattaacaacaag	CRISPR spacer
ttttggtgtcatctggcaatattaacatcaag	Protospacer
.* *************** ******** ****

3. spacer 2.4|490691|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MG945344 (UNVERIFIED: Microviridae sp. isolate 2418-1801, complete genome) position: , mismatch: 4, identity: 0.875

ctgtggtgtcatctggcattattaacaacaag	CRISPR spacer
ttttggtgtcatctggcaatattaacatcaag	Protospacer
.* *************** ******** ****

4. spacer 2.4|490691|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MG945806 (UNVERIFIED: Microviridae sp. isolate 4968-1801, complete genome) position: , mismatch: 4, identity: 0.875

ctgtggtgtcatctggcattattaacaacaag	CRISPR spacer
ttttggtgtcatctggcaatattaacatcaag	Protospacer
.* *************** ******** ****

5. spacer 2.4|490691|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MG945524 (UNVERIFIED: Microviridae sp. isolate 2044-180101, complete genome) position: , mismatch: 4, identity: 0.875

ctgtggtgtcatctggcattattaacaacaag	CRISPR spacer
ttttggtgtcatctggcaatattaacatcaag	Protospacer
.* *************** ******** ****

6. spacer 2.4|490691|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MG945712 (UNVERIFIED: Microviridae sp. isolate 1921-1801, complete genome) position: , mismatch: 4, identity: 0.875

ctgtggtgtcatctggcattattaacaacaag	CRISPR spacer
ttttggtgtcatctggcaatattaacatcaag	Protospacer
.* *************** ******** ****

7. spacer 2.4|490691|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MG945612 (UNVERIFIED: Microviridae sp. isolate 4528-1801, complete genome) position: , mismatch: 4, identity: 0.875

ctgtggtgtcatctggcattattaacaacaag	CRISPR spacer
ttttggtgtcatctggcaatattaacatcaag	Protospacer
.* *************** ******** ****

8. spacer 1.1|168857|27|NC_017098|CRISPRCasFinder matches to NC_002143 (Comamonas testosteroni PtL5 cryptic plasmid pPT1, complete sequence) position: , mismatch: 5, identity: 0.815

gccgtcgctggcggccactgaccgcga	CRISPR spacer
ggaggcgctggcggccattgaccgcgt	Protospacer
*  * ************.********

9. spacer 3.1|2022131|28|NC_017098|CRISPRCasFinder matches to NZ_CP022424 (Vitreoscilla filiformis strain ATCC 15551 plasmid pVF1, complete sequence) position: , mismatch: 5, identity: 0.821

tgagccactgcgcccccgcgggctgagc	CRISPR spacer
gacgccactgcccccctgcgggctgagc	Protospacer
 . ******** ****.***********

10. spacer 3.1|2022131|28|NC_017098|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 5, identity: 0.821

tgagccactgcgcccccgcgggctgagc	CRISPR spacer
tgcgccactgcgccaccgcgggccggac	Protospacer
** *********** ********.*..*

11. spacer 3.1|2022131|28|NC_017098|CRISPRCasFinder matches to NZ_CP023713 (Rhodococcus ruber strain YC-YT1 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.821

tgagccactgcgcccccgcgggctgagc	CRISPR spacer
tgagcggctgcgcccccgcgggcgtcgc	Protospacer
***** .****************   **

12. spacer 1.1|168857|27|NC_017098|CRISPRCasFinder matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.778

gccgtcgctggcggccactgaccgcga	CRISPR spacer
catctcgctggcggcgaccgaccgcga	Protospacer
  . *********** **.********

13. spacer 1.1|168857|27|NC_017098|CRISPRCasFinder matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 6, identity: 0.778

gccgtcgctggcggccactgaccgcga	CRISPR spacer
catctcgctggcggcgaccgaccgcga	Protospacer
  . *********** **.********

14. spacer 1.1|168857|27|NC_017098|CRISPRCasFinder matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.778

gccgtcgctggcggccactgaccgcga	CRISPR spacer
catctcgctggcggcgaccgaccgcga	Protospacer
  . *********** **.********

15. spacer 1.1|168857|27|NC_017098|CRISPRCasFinder matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 6, identity: 0.778

gccgtcgctggcggccactgaccgcga	CRISPR spacer
catctcgctggcggcgaccgaccgcga	Protospacer
  . *********** **.********

16. spacer 3.1|2022131|28|NC_017098|CRISPRCasFinder matches to NZ_KR152226 (Micrococcus sp. MG-2010-D12 plasmid pJD12, complete sequence) position: , mismatch: 6, identity: 0.786

tgagccactgcgcccccgcgggctgagc	CRISPR spacer
cgcttccctgcgcccccgcgcgctgagc	Protospacer
.*  .* ************* *******

17. spacer 1.1|168857|27|NC_017098|CRISPRCasFinder matches to NZ_CP040995 (Klebsiella pneumoniae strain FDAARGOS_775 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.741

gccgtcgctggcggccactgaccgcga	CRISPR spacer
tcgttcgctggcggccactgacccgct	Protospacer
 *  *******************

18. spacer 2.15|491351|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MT840188 (Bacteriophage sp. contig_37 genomic sequence) position: , mismatch: 7, identity: 0.781

tccttcaaaagttgccggggagttacccccgg	CRISPR spacer
gcttgccaaacttgccggggagttagcccccg	Protospacer
 *.* * *** ************** **** *

19. spacer 2.30|492251|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018459 (Klebsiella pneumoniae strain Kp_Goe_39795 plasmid pKp_Goe_795-4, complete sequence) position: , mismatch: 7, identity: 0.781

-tcgtcattccataagagctcccaagttgtgcc	CRISPR spacer
atcg-aagtccataaaagctcccaagatgtgga	Protospacer
 ***  * *******.********** ****

20. spacer 2.31|492311|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MN693824 (Marine virus AFVG_250M380, complete genome) position: , mismatch: 7, identity: 0.781

ccgagggcatgagcgtgaccgtgcaggtaaca	CRISPR spacer
ccgagggcttgagcgtgcccgtgcccgtggct	Protospacer
******** ******** ******  **..*

21. spacer 2.31|492311|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MN694245 (Marine virus AFVG_250M381, complete genome) position: , mismatch: 7, identity: 0.781

ccgagggcatgagcgtgaccgtgcaggtaaca	CRISPR spacer
ccgagggcttgagcgtgcccgtgcccgtggct	Protospacer
******** ******** ******  **..*

22. spacer 2.33|492431|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NC_041925 (Proteus phage VB_PmiS-Isfahan, complete genome) position: , mismatch: 7, identity: 0.781

gtaaagccatattttaaacatgattcaaaggt	CRISPR spacer
gtaaagccatattttaaagttgattccagttg	Protospacer
******************  ****** *.

23. spacer 2.33|492431|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MG575420 (Proteus phage vB_PmiP_RS10pmA, complete genome) position: , mismatch: 7, identity: 0.781

gtaaagccatattttaaacatgattcaaaggt	CRISPR spacer
gtaaagccatattttaaagttgattccagttg	Protospacer
******************  ****** *.

24. spacer 2.36|492611|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032676 (Rhodococcus rhodochrous strain ATCC BAA870 plasmid pNit, complete sequence) position: , mismatch: 7, identity: 0.781

----agtttcgggtcaacctcatctggtatgtgcat	CRISPR spacer
ccggagt----ggtcaacctcatctggactgtgcgt	Protospacer
    ***    ****************  *****.*

25. spacer 2.42|492971|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049364 (Acinetobacter baumannii strain ATCC 17978 plasmid pAB1, complete sequence) position: , mismatch: 7, identity: 0.781

taagaat----tacttcatccgcaaagttaggattc	CRISPR spacer
----agtttgatacttcatcggcaaatttaggattc	Protospacer
    *.*    ********* ***** *********

26. spacer 2.42|492971|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040048 (Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

taagaat----tacttcatccgcaaagttaggattc	CRISPR spacer
----agtttgatacttcatcggcaaatttaggattc	Protospacer
    *.*    ********* ***** *********

27. spacer 2.3|490631|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NC_013859 (Azospirillum sp. B510 plasmid pAB510e, complete sequence) position: , mismatch: 8, identity: 0.75

-----aacctttggttgctccgatattgcacgaaatt	CRISPR spacer
aggtaaac-----gttgctcggatattgaacgaaatc	Protospacer
     ***     ******* ******* *******.

28. spacer 2.11|491111|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to CP001771 (Spirosoma linguale DSM 74 plasmid pSLIN02, complete sequence) position: , mismatch: 8, identity: 0.75

taccgattcgctcatgcgctgcagcacgagtt	CRISPR spacer
gctggattcgttcatgcgttgcagcacggttt	Protospacer
  . ******.*******.*********. **

29. spacer 2.16|491411|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

attctcgcgctcgggcaatgcggca-agcaagg	CRISPR spacer
gatctcgcgctcgtgcaaggcggcatcgcgac-	Protospacer
. *********** **** ******  **.*

30. spacer 2.18|491531|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to AP018361 (Lactobacillus phage T25 DNA, complete genome) position: , mismatch: 8, identity: 0.75

atctaatacagctgcatattgtgacaacgtgt	CRISPR spacer
taatgatccagctgcatatggtgacaacgatt	Protospacer
   *.** *********** *********  *

31. spacer 2.18|491531|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MN830258 (Lactobacillus phage JNU_P9, complete genome) position: , mismatch: 8, identity: 0.75

atctaatacagctgcatattgtgacaacgtgt	CRISPR spacer
taatgatccagctgcatatggtgacaacgatt	Protospacer
   *.** *********** *********  *

32. spacer 2.19|491591|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007214 (Burkholderia plantarii strain ATCC 43733 plasmid bpln_1p, complete sequence) position: , mismatch: 8, identity: 0.75

ttgcagagctgctggtagagcgcatgaccggc	CRISPR spacer
cgtcatcgctgctggtcgagcgcatgaccgcg	Protospacer
.  **  ********* *************

33. spacer 2.19|491591|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022727 (Erwinia persicina strain B64 plasmid pEP2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgcagagctgctggtagagcgcatgaccggc	CRISPR spacer
cgtctggcctgctggtacagcgcctgaccggc	Protospacer
.  * *. ********* ***** ********

34. spacer 2.19|491591|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ttgcagagctgctggtagagcgcatgaccggc	CRISPR spacer
ttgcagatctgctggtagcgcgcaacgccctg	Protospacer
******* ********** *****  .**

35. spacer 2.20|491651|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NC_047988 (Microbacterium phage Metamorphoo, complete genome) position: , mismatch: 8, identity: 0.75

agtat-tgtggagcatccgcgcctgatgtagtc	CRISPR spacer
-gcacgcggagagcatctgcgcctgatggagtc	Protospacer
 *.*. .* .*******.********** ****

36. spacer 2.21|491711|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MK765583 (Tortoise microvirus 33 isolate 33_SP_127, complete genome) position: , mismatch: 8, identity: 0.75

tatcacaaccttattcctccacgactagaccc---	CRISPR spacer
tatcataaccttatacctccacg---tgacatacg	Protospacer
*****.******** ********    *** .

37. spacer 2.21|491711|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MG945317 (UNVERIFIED: Microviridae sp. isolate 1554-180101, complete genome) position: , mismatch: 8, identity: 0.75

tatcacaaccttattcctccacgactagaccc--	CRISPR spacer
aatcataaccttatacctccacga--aaactaat	Protospacer
 ****.******** *********  *.**.

38. spacer 2.31|492311|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029776 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ccgagggcatgagcgtgaccgtgcaggtaaca	CRISPR spacer
cgcagggcacgaccgtgaccgtgcagttcccc	Protospacer
*  ******.** ************* *  *

39. spacer 2.31|492311|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 8, identity: 0.75

ccgagggcatgagcgtgaccgtgc-aggtaaca	CRISPR spacer
agctgggcatgagcgtgaacgtgctgggcaac-	Protospacer
    ************** ***** .**.***

40. spacer 2.41|492911|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to HQ634175 (Cyanophage P-RSM1 genomic sequence) position: , mismatch: 8, identity: 0.75

tcgggaaactcgttctggatttgccgcctgag	CRISPR spacer
tctggaaactctttctggatttgtccagtcat	Protospacer
** ******** ***********.*   * *

41. spacer 2.47|493271|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NC_020303 (Corynebacterium halotolerans YIM 70093 = DSM 44683 plasmid pCha1, complete sequence) position: , mismatch: 8, identity: 0.75

tgggtgttgggggcgtcgacctcgctggtttc	CRISPR spacer
ctgctcctgggggcggcgacctcgctggttct	Protospacer
. * * .******** **************..

42. spacer 2.1|490511|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MN693620 (Marine virus AFVG_250M617, complete genome) position: , mismatch: 9, identity: 0.719

cgagacaggatcggtcacccgcttttctgcga	CRISPR spacer
aataaccggataggtcacccgcttttcttcct	Protospacer
 . .** **** **************** *

43. spacer 2.9|490991|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT960613 (Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600 plasmid P, complete sequence) position: , mismatch: 9, identity: 0.719

tgtctacgaccgcaccgagcataagcagctgg	CRISPR spacer
tcaatatgaccgcatcgagcataagcaaaaag	Protospacer
*   **.*******.************.  .*

44. spacer 2.11|491111|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020716 (Cnuibacter physcomitrellae strain XA(T) plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

taccgattcgctcatgcgctgcagcacgagtt	CRISPR spacer
gaccggctcgctcatgcgctgcagcagcgccg	Protospacer
 ****..*******************  . .

45. spacer 2.16|491411|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to CP006879 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602b, complete sequence) position: , mismatch: 9, identity: 0.719

attctcgcgctcgggcaatgcggcaagcaagg	CRISPR spacer
tccctcgcgctcgggcaatgtgacaaagccgg	Protospacer
 ..*****************.*.***.   **

46. spacer 2.19|491591|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MK494124 (Mycobacterium phage Kristoff, complete genome) position: , mismatch: 9, identity: 0.719

ttgcagagctgctggtagagcgcatgaccggc	CRISPR spacer
gcccagagctgctggtacagcgcctggaacgc	Protospacer
 . ************** ***** **.   **

47. spacer 2.19|491591|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to KM101120 (Mycobacterium phage Trike, complete genome) position: , mismatch: 9, identity: 0.719

ttgcagagctgctggtagagcgcatgaccggc	CRISPR spacer
gcccagagctgctggtacagcgcctggaacgc	Protospacer
 . ************** ***** **.   **

48. spacer 2.19|491591|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MH001459 (Mycobacterium phage KittenMittens, complete genome) position: , mismatch: 9, identity: 0.719

ttgcagagctgctggtagagcgcatgaccggc	CRISPR spacer
gcccagagctgctggtacagcgcctggaacgc	Protospacer
 . ************** ***** **.   **

49. spacer 2.19|491591|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MN586038 (Mycobacterium phage WalterMcMickey, complete genome) position: , mismatch: 9, identity: 0.719

ttgcagagctgctggtagagcgcatgaccggc	CRISPR spacer
gcccagagctgctggtacagcgcctggaacgc	Protospacer
 . ************** ***** **.   **

50. spacer 2.19|491591|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MN807247 (Mycobacterium phage Chupacabra, complete genome) position: , mismatch: 9, identity: 0.719

ttgcagagctgctggtagagcgcatgaccggc	CRISPR spacer
gcccagagctgctggtacagcgcctggaacgc	Protospacer
 . ************** ***** **.   **

51. spacer 2.19|491591|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MF773750 (Mycobacterium phage OKCentral2016, complete genome) position: , mismatch: 9, identity: 0.719

ttgcagagctgctggtagagcgcatgaccggc	CRISPR spacer
gcccagagctgctggtacagcgcctggaacgc	Protospacer
 . ************** ***** **.   **

52. spacer 2.19|491591|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NC_021307 (Mycobacterium phage Severus, complete genome) position: , mismatch: 9, identity: 0.719

ttgcagagctgctggtagagcgcatgaccggc	CRISPR spacer
gcccagagctgctggtacagcgcctggaacgc	Protospacer
 . ************** ***** **.   **

53. spacer 2.19|491591|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NC_041982 (Mycobacterium phage Twister, complete genome) position: , mismatch: 9, identity: 0.719

ttgcagagctgctggtagagcgcatgaccggc	CRISPR spacer
gcccagagctgctggtacagcgcctggaacgc	Protospacer
 . ************** ***** **.   **

54. spacer 2.19|491591|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to JX307704 (Mycobacterium virus Goose, complete genome) position: , mismatch: 9, identity: 0.719

ttgcagagctgctggtagagcgcatgaccggc	CRISPR spacer
gcccagagctgctggtacagcgcctggaacgc	Protospacer
 . ************** ***** **.   **

55. spacer 2.19|491591|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NC_023609 (Mycobacterium phage RhynO, complete genome) position: , mismatch: 9, identity: 0.719

ttgcagagctgctggtagagcgcatgaccggc	CRISPR spacer
gcccagagctgctggtacagcgcctggaacgc	Protospacer
 . ************** ***** **.   **

56. spacer 2.19|491591|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MT522002 (Mycobacterium phage Topanga, complete genome) position: , mismatch: 9, identity: 0.719

ttgcagagctgctggtagagcgcatgaccggc	CRISPR spacer
gcccagagctgctggtacagcgcctggaacgc	Protospacer
 . ************** ***** **.   **

57. spacer 2.23|491831|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 9, identity: 0.719

ttagatggctgctctgtttcgtgtacttttcc	CRISPR spacer
tttagtggctgtgctgtttcgtgtacttgcgg	Protospacer
** ..******. *************** .

58. spacer 2.42|492971|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007449 (Yersinia enterocolitica LC20 plasmid plasmid1_80K, complete sequence) position: , mismatch: 9, identity: 0.719

taagaattacttcatccgcaaagt----taggattc	CRISPR spacer
gaagaattgcttcacccgcaaagtatcgcggg----	Protospacer
 *******.*****.*********    ..**

59. spacer 2.7|490871|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041355 (Pseudomonas aeruginosa strain AZPAE15042 plasmid pIHMA87, complete sequence) position: , mismatch: 10, identity: 0.688

gttgtcgtcgaggatgccccattttactgtat	CRISPR spacer
gttgtcgtcgcagatgccccattcaatgcggc	Protospacer
********** .***********. *.   ..

60. spacer 2.11|491111|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to LT599585 (Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid) position: , mismatch: 10, identity: 0.688

taccgattcgctcatgcgctgcagcacgagtt	CRISPR spacer
caatgattcgcgcatgcggtgcagcacagaca	Protospacer
.* .******* ****** ********....

61. spacer 2.16|491411|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594668 (Variovorax sp. SRS16 plasmid 3) position: , mismatch: 10, identity: 0.688

attctcgcgctcgggcaatgcggcaagcaagg	CRISPR spacer
ggcaggctgctcgcgcaatgcggcgagcaagg	Protospacer
. .    .***** **********.*******

62. spacer 2.16|491411|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013523 (Rhizobium phaseoli strain R744 plasmid pRphaR744a, complete sequence) position: , mismatch: 10, identity: 0.688

attctcgcgctcgggcaatgcggcaagcaagg	CRISPR spacer
ggtctcgcgttcgggcaatgcgccatcgacct	Protospacer
. *******.************ **   *

63. spacer 2.16|491411|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 10, identity: 0.688

attctcgcgctcgggcaatgcggcaagcaagg	CRISPR spacer
cgtctcgcgttcgggcaatgcgccatagacct	Protospacer
  *******.************ ** . *

64. spacer 2.16|491411|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 10, identity: 0.688

attctcgcgctcgggcaatgcggcaagcaagg	CRISPR spacer
ggtctcgcgttcgggcaatgcgccatcgacct	Protospacer
. *******.************ **   *

65. spacer 2.16|491411|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 10, identity: 0.688

attctcgcgctcgggcaatgcggcaagcaagg	CRISPR spacer
ggtctcgcgttcgggcaatgcgccatcgacct	Protospacer
. *******.************ **   *

66. spacer 2.19|491591|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013369 (Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence) position: , mismatch: 10, identity: 0.688

ttgcagagctgctggtagagcgcatgaccggc	CRISPR spacer
cgagctcgctgctggttcagcgcatgaccgcc	Protospacer
. .    *********  ************ *

67. spacer 2.19|491591|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011920 (Burkholderia cenocepacia strain ST32 plasmid pBCEN1232, complete sequence) position: , mismatch: 10, identity: 0.688

ttgcagagctgctggtagagcgcatgaccggc	CRISPR spacer
cgtcgtcgctgctggtcgagcggatgaccgca	Protospacer
.  *.  ********* ***** *******

68. spacer 2.21|491711|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to MG945267 (UNVERIFIED: Microviridae sp. isolate 3270-1711, partial genome) position: , mismatch: 10, identity: 0.688

tatcacaaccttattcctccacgactagaccc	CRISPR spacer
actcatagccttattcctccacgactcacagt	Protospacer
  ***.*.****************** .   .

69. spacer 2.25|491951|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040842 (Leptospira weilii strain CUDO6 plasmid pDO6, complete sequence) position: , mismatch: 10, identity: 0.688

tgtcctatttcggtgaacaacctcaatccatt	CRISPR spacer
cattttatatccgtgaacaacctcaatcacaa	Protospacer
..*..*** ** ****************

70. spacer 2.25|491951|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040845 (Leptospira weilii strain CUD13 plasmid pD13, complete sequence) position: , mismatch: 10, identity: 0.688

tgtcctatttcggtgaacaacctcaatccatt	CRISPR spacer
cattttatatccgtgaacaacctcaatcacaa	Protospacer
..*..*** ** ****************

71. spacer 2.46|493211|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040842 (Leptospira weilii strain CUDO6 plasmid pDO6, complete sequence) position: , mismatch: 10, identity: 0.688

tgtcctatttcggtgaacaacctcaatccatt	CRISPR spacer
cattttatatccgtgaacaacctcaatcacaa	Protospacer
..*..*** ** ****************

72. spacer 2.46|493211|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040845 (Leptospira weilii strain CUD13 plasmid pD13, complete sequence) position: , mismatch: 10, identity: 0.688

tgtcctatttcggtgaacaacctcaatccatt	CRISPR spacer
cattttatatccgtgaacaacctcaatcacaa	Protospacer
..*..*** ** ****************

73. spacer 2.11|491111|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014598 (Yangia sp. CCB-MM3 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.656

taccgattcgctcatgcgctgcagcacgagtt	CRISPR spacer
ggtcgcttcggtcatgcgctgcagcagcgaca	Protospacer
 ..** **** ***************  ...

74. spacer 2.12|491171|32|NC_017098|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039694 (Agrobacterium larrymoorei strain CFBP5473 plasmid pTiCFBP5473, complete sequence) position: , mismatch: 11, identity: 0.656

tacttgcaaacttggccggacaagctgttaat	CRISPR spacer
cgaatgcaaacttggctggataagctgaccga	Protospacer
..  ************.***.****** . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1542283 : 1608641

Paenibacillus_phage(36.36%)

integrase,tRNA,transposase

attL 1549320:1549335|attR 1620780:1620795

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014455403.1\|1542283_1543408_+\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_014455404.1\|1543404_1544331_-	dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_014455405.1\|1544323_1545160_-	dihydroorotate dehydrogenase electron transfer subunit	NA	NA	NA	NA
WP_014455406.1\|1545209_1545830_-	hypothetical protein	NA	NA	NA	NA
WP_014455407.1\|1545868_1546648_+	hypothetical protein	NA	NA	NA	NA
WP_014455408.1\|1546667_1548428_+	hypothetical protein	NA	NA	NA	NA
WP_169313559.1\|1548451_1548865_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_041397105.1\|1548932_1549517_-	hypothetical protein	NA	NA	NA	NA
1549320:1549335	attL	NA	NA	NA	NA
WP_014455410.1\|1549561_1551385_+	recombinase family protein	A0A139ZPH5	Marinitoga_camini_virus	1.5e-20	26.8
WP_014455411.1\|1551389_1551572_-	hypothetical protein	NA	NA	NA	NA
WP_014455412.1\|1551568_1551772_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_014455413.1\|1551940_1552717_+	ParA family protein	NA	NA	NA	NA
WP_014455414.1\|1552694_1553552_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_156809971.1\|1553587_1553905_+	hypothetical protein	NA	NA	NA	NA
WP_014455416.1\|1553975_1554911_+	hypothetical protein	NA	NA	NA	NA
WP_014455417.1\|1554903_1555641_+	hypothetical protein	NA	NA	NA	NA
WP_014455418.1\|1555637_1555925_+	hypothetical protein	NA	NA	NA	NA
WP_014455419.1\|1555937_1556282_-	glutaredoxin	NA	NA	NA	NA
WP_014455420.1\|1556419_1556767_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014455421.1\|1556949_1558038_+	hypothetical protein	NA	NA	NA	NA
WP_041397809.1\|1558178_1563023_+	DEAD/DEAH box helicase	A0A2H4UTW8	Bodo_saltans_virus	1.4e-52	27.3
WP_014455423.1\|1563087_1564887_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_014455424.1\|1564883_1565135_+	DUF3006 domain-containing protein	NA	NA	NA	NA
WP_156809972.1\|1565110_1566166_+	helix-hairpin-helix domain-containing protein	Q332C0	Clostridium_botulinum_C_phage	1.6e-43	37.9
WP_014455426.1\|1566180_1566633_-	hypothetical protein	NA	NA	NA	NA
WP_014455427.1\|1566820_1567951_+	DUF285 domain-containing protein	NA	NA	NA	NA
WP_014455428.1\|1567995_1568181_-	hypothetical protein	NA	NA	NA	NA
WP_014455429.1\|1568247_1569057_-\|integrase	tyrosine-type recombinase/integrase	S5M872	Bacillus_phage	9.1e-10	25.7
WP_014455430.1\|1569326_1571219_+	AAA family ATPase	NA	NA	NA	NA
WP_014454853.1\|1571318_1572500_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	2.3e-54	34.3
WP_014455431.1\|1573153_1573912_+	hypothetical protein	NA	NA	NA	NA
WP_014454123.1\|1574494_1575691_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.5e-64	35.9
WP_014455432.1\|1576428_1577445_-	ATP-dependent DNA helicase RecQ	F2NZ48	Diadromus_pulchellus_ascovirus	1.4e-23	30.3
WP_014455433.1\|1577542_1582018_+	activase	NA	NA	NA	NA
WP_156810061.1\|1582007_1582607_-	YqgE/AlgH family protein	NA	NA	NA	NA
WP_014455435.1\|1582695_1583844_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014455436.1\|1583901_1584903_+	ketopantoate reductase	NA	NA	NA	NA
WP_014455437.1\|1584987_1585161_+	hypothetical protein	NA	NA	NA	NA
WP_014455438.1\|1585157_1585994_+	alpha/beta fold hydrolase	A0A2K9L091	Tupanvirus	5.5e-18	29.3
WP_014455439.1\|1586178_1587165_-	aldo/keto reductase	NA	NA	NA	NA
WP_041397113.1\|1587183_1588341_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_014455441.1\|1588579_1589914_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014455442.1\|1589993_1590926_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_014455443.1\|1590922_1591756_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_014455444.1\|1591761_1593417_+	glycoside hydrolase family 43 protein	NA	NA	NA	NA
WP_014455445.1\|1593444_1594209_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_014455446.1\|1594305_1595139_-	NERD domain-containing protein	NA	NA	NA	NA
WP_014455448.1\|1595636_1596203_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014455449.1\|1596247_1597750_-	hypothetical protein	NA	NA	NA	NA
WP_014455450.1\|1597908_1598754_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_014455451.1\|1598763_1599513_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_169313560.1\|1599635_1600397_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_014454853.1\|1600713_1601895_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	2.3e-54	34.3
WP_083849460.1\|1601972_1602077_+	hypothetical protein	NA	NA	NA	NA
WP_156809974.1\|1602080_1602287_-	hypothetical protein	NA	NA	NA	NA
WP_014455453.1\|1602338_1603535_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.7e-65	37.0
WP_014455454.1\|1604088_1604904_-	hypothetical protein	NA	NA	NA	NA
WP_014455456.1\|1604984_1605836_-	hypothetical protein	NA	NA	NA	NA
WP_014455457.1\|1605913_1606939_-	hypothetical protein	NA	NA	NA	NA
WP_083849568.1\|1607420_1608641_+\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	5.1e-65	42.5
1620780:1620795	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_017098

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection