CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_017053	Streptococcus pyogenes MGAS1882, complete genome	1 crisprs	DinG,csm6,cas9,cas1,cas2,csn2,cas3,DEDDh,csa3	0	3	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_017053_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017053_1

781761-781994

TypeII

II-A

Consensus_repeat	Method
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	PILER-CR
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	CRISPRCasFinder
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	CRT

3 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NC_017053_1

>merge|NC_017053|1|781761-781994|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACAATCCAATGATTTTAAATTTAGTGAAGACTGTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACTGACGAAATTATTAAACGTTGTTCTGGGGAGTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACCAGTCATTAAGTATGCGGACTTAGTTAAGCGTTTTAGAGCTATGCTGTTTTGAATGGTCTCCATTC

>NC_017053|1|1|781761-781928|PILER-CR
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	AATCCAATGATTTTAAATTTAGTGAAGACT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	TGACGAAATTATTAAACGTTGTTCTGGGGA
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC

>NC_017053|1|1|781761-781994|CRISPRCasFinder
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	AATCCAATGATTTTAAATTTAGTGAAGACT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	TGACGAAATTATTAAACGTTGTTCTGGGGA
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	CAGTCATTAAGTATGCGGACTTAGTTAAGC
GTTTTAGAGCTATGCTGTTTTGAATGGTCTCCATTC

>NC_017053|1|1|781761-781994|CRT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	AATCCAATGATTTTAAATTTAGTGAAGACT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	TGACGAAATTATTAAACGTTGTTCTGGGGA
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	CAGTCATTAAGTATGCGGACTTAGTTAAGC
GTTTTAGAGCTATGCTGTTTTGAATGGTCTCCATTC

Protein	Signature genes	Signature genes Name	Protein_function
NC_017053.1\|WP_014407539.1\|773820_774585_+\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NC_017053.1\|WP_014411837.1\|774584_775217_+\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NC_017053.1\|WP_002984856.1\|769745_771101_+\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
NC_017053.1\|WP_080011069.1\|784939_785932_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|237171
NC_017053.1\|WP_014407537.1\|771928_773059_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NC_017053.1\|WP_014407547.1\|786684_787704_+\|YeiH-family-putative-sulfate-export-transporter	unknown	unknown	gnl\|CDD\|225411
NC_017053.1\|WP_014407545.1\|782637_784470_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NC_017053.1\|WP_014407538.1\|773068_773821_+\|acyl-[acyl-carrier-protein]-thioesterase	unknown	unknown	gnl\|CDD\|226401
NC_017053.1\|WP_002989931.1\|789676_790504_+\|PTS-mannose/fructose/sorbose-transporter-family-subunit-IID	unknown	unknown	gnl\|CDD\|226239
NC_017053.1\|WP_014407536.1\|771224_771866_+\|hypothetical-protein	unknown	unknown	unknown
NC_017053.1\|WP_014407541.1\|775695_779799_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NC_017053.1\|WP_010922252.1\|780995_781658_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NC_017053.1\|WP_002989951.1\|780664_781006_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NC_017053.1\|WP_041174363.1\|782124_782304_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|239876
NC_017053.1\|WP_002984844.1\|788870_789680_+\|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226238
NC_017053.1\|WP_014407548.1\|787910_788336_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|225446
NC_017053.1\|WP_014407546.1\|786117_786555_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NC_017053.1\|WP_002984845.1\|788362_788854_+\|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|225976
NC_017053.1\|WP_014407544.1\|782367_782514_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|179085
NC_017053.1\|WP_014407542.1\|779798_780668_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851

Protein	Function_ID	Function_description	E-value
NC_017053.1\|WP_014407539.1\|773820_774585_+\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.61039e-128
NC_017053.1\|WP_014411837.1\|774584_775217_+\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	1.81173e-87
NC_017053.1\|WP_002984856.1\|769745_771101_+\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
NC_017053.1\|WP_080011069.1\|784939_785932_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	2.34525e-08
NC_017053.1\|WP_014407537.1\|771928_773059_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NC_017053.1\|WP_014407547.1\|786684_787704_+\|YeiH-family-putative-sulfate-export-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	3.20088e-103
NC_017053.1\|WP_014407545.1\|782637_784470_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NC_017053.1\|WP_014407538.1\|773068_773821_+\|acyl-[acyl-carrier-protein]-thioesterase	gnl\|CDD\|226401	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism].	2.96369e-109
NC_017053.1\|WP_002989931.1\|789676_790504_+\|PTS-mannose/fructose/sorbose-transporter-family-subunit-IID	gnl\|CDD\|226239	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism].	1.55707e-109
NC_017053.1\|WP_014407542.1\|779798_780668_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	9.96999e-131
NC_017053.1\|WP_014407541.1\|775695_779799_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NC_017053.1\|WP_010922252.1\|780995_781658_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.48365e-121
NC_017053.1\|WP_002989951.1\|780664_781006_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	4.79e-58
NC_017053.1\|WP_041174363.1\|782124_782304_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|239876	cd04413, NDPk_I, Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large family of structurally and functionally conserved proteins from bacteria to humans that generally catalyze the transfer of gamma-phosphates of a nucleoside triphosphate (NTP) donor onto a nucleoside diphosphate (NDP) acceptor through a phosphohistidine intermediate. The mammalian nm23/NDP kinase gene family can be divided into two distinct groups. The group I genes encode proteins that generally have highly homologous counterparts in other organisms and possess the classic enzymatic activity of a kinase. This group includes vertebrate NDP kinases A-D (Nm23- H1 to -H4), and its counterparts in bacteria, archea and other eukaryotes. NDP kinases exist in two different quaternary structures; all known eukaryotic enzymes are hexamers, while some bacterial enzymes are tetramers, as in Myxococcus. They possess the NDP kinase active site motif (NXXH[G/A]SD) and the nine residues that are most essential for catalysis.	1.99298e-05
NC_017053.1\|WP_002984844.1\|788870_789680_+\|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC	gnl\|CDD\|226238	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism].	3.81104e-76
NC_017053.1\|WP_014407548.1\|787910_788336_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|225446	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism].	2.02549e-30
NC_017053.1\|WP_014407546.1\|786117_786555_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	7.26176e-84
NC_017053.1\|WP_002984845.1\|788362_788854_+\|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB	gnl\|CDD\|225976	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism].	2.00329e-54
NC_017053.1\|WP_014407544.1\|782367_782514_+\|hypothetical-protein	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	4.273e-14

>NC_017053.1|WP_010922252.1|780995_781658_+|type-II-A-CRISPR-associated-protein-Csn2
MNLNFSLLDEPIPLRGGTILVLEDVCVFSKIVQYCYQYEEDSELKFFDHKMKTIKESEIMLVTDILGFDVNSSTILKLIHADLESQFNEKPEVKSMIDKLVATITELIVFECLENELDLEYDEITILELIKSLGVKVETQSDTIFEKCLEILQIFKYLTKKKLLIFVNSGAFLTKDEVASLQEYISLTNLTVLFLEPRELYDFPQYILDEDYFLITKNMV
>NC_017053.1|WP_002989951.1|780664_781006_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTDTAEERKAYRKFRKFLLSEGFIMHQFSIYSKLLLNNTANNAMIGRLREHNPNKGNITLLTVTEKQFARMIYLHGERNNCIANSDERLVFLGEAFDES
>NC_017053.1|WP_014407542.1|779798_780668_+|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDAYKTELIHLSEIDILLLETTDIVLSTMLVKRLVDENVLVIFCDDKRLPTAMLMPFYGRHDSSLQLGKQMSWSETVKSQVWTTIIAQKILNQSCYLGACSYFEKSQSIMDLYHGLENFDPSNREGHAARIYFNTLFGNDFSRDLEHPTNAGLDYGYTLLLSMFAREVVVSGCMTQFGLKHANQFNQFNFASDIMEPFRPLVDKIVYENRNQPFPKIKRELFTLFSDTFSYNGKEMYLTNIISDYTKKVVKALNNEGKGVPEFRI
>NC_017053.1|WP_014407541.1|775695_779799_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MDKKYSIGLDIGTNSVGWAVITDDYKVPSKKFKVLGNTDRHSIKKNLIGALLFGSGETAEATRLKRTARRRYTRRKNRICYLQEIFSNEMAKVDDSFFHRLEESFLVEEDKKHERHPIFGNIVDEVAYHEKYPTIYHLRKKLADSTDKADLRLIYLALAHMIKFRGHFLIEGDLNPDNSDVDKLFIQLVQIYNQLFEENPINASRVDAKAILSARLSKSRRLENLIAQLPGEKRNGLFGNLIALSLGLTPNFKSNFDLAEDAKLQLSKDTYDDDLDNLLAQIGDQYADLFLAAKNLSDAILLSDILRVNSEITKAPLSASMIKRYDEHHQDLTLLKALVRQQLPEKYKEIFFDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLVKLNREDLLRKQRTFDNGSIPHQIHLGELHAILRRQEDFYPFLKDNREKIEKILTFRIPYYVGPLARGNSRFAWMTRKSEETITPWNFEEVVDKGASAQSFIERMTNFDKNLPNEKVLPKHSLLYEYFTVYNELTKVKYVTEGMRKPAFLSGEQKKAIVDLLFKTNRKVTVKQLKEDYFKKIECFDSVEISGVEDRFNASLGAYHDLLKIIKDKDFLDNEENEDILEDIVLTLTLFEDRGMIEERLKTYAHLFDDKVMKQLKRRRYTGWGRLSRKLINGIRDKQSGKTILDFLKSDGFANRNFMQLIHDDSLTFKEDIQKAQVSGQGHSLHEQIANLAGSPAIKKGILQTVKIVDELVKVMGHKPENIVIEMARENQTTQKGQKNSRERMKRIEEGIKELGSQILKEHPVENTQLQNEKLYLYYLQNGRDMYVDQELDINRLSDYDVDHIVPQSFIKDDSIDNKVLTRSDKNRGKSDNVPSEEVVKKMKNYWRQLLNAKLITQRKFDNLTKAERGGLSELDKAGFIKRQLVETRQITKHVAQILDSRMNTKYDENDKLIREVKVITLKSKLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKKYPKLESEFVYGDYKVYDVRKMIAKSEQEIGKATAKYFFYSNIMNFFKTEITLANGEIRKRPLIETNGETGEIVWDKGRDFATVRKVLSMPQVNIVKKTEVQTGGFSKESILPKRNSDKLIARKKDWDPKKYGGFDSPTVAYSVLVVAKVEKGKSKKLKSVKELLGITIMERSSFEKNPIDFLEAKGYKEVKKDLIIKLPKYSLFELENGRKRMLASAGELQKGNELALPSKYVNFLYLASHYEKLKGSPEDNEQKQLFVEQHKHYLDEIIEQISEFSKRVILADANLDKVLSAYNKHRDKPIREQAENIIHLFTLTNLGAPAAFKYFDTTIDRKRYTSTKEVLDATLIHQSITGLYETRIDLSQLGGD
>NC_017053.1|WP_014411837.1|774584_775217_+|TIGR01906-family-membrane-protein
MVENTKLLCSWVWLLALAILITIYSTWLWYPLEVDHLKLEQVVFMSKDAILHNYNGLLNYLTNPFVTRLEFANFHSSADGLKHFADVKWLFHLTQVVFLGLLYPTLKTFTQRLQTKRFWLLQKPLILAALFPLMIGLMASFIGFEHFFTLFHQVLFVGDSSWLFDPLKDPVIWILPEVFFLHCFLFFMIVYEIILWSLVGLARWQRLNVE
>NC_017053.1|WP_014407539.1|773820_774585_+|TIGR01457-family-HAD-type-hydrolase
MPYKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQSMLANQFHVETSIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGYVEELENPAYVVVGLDSQMTYEMLAIATLAIQKGALFIGTNPDLNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDIMAGIQNDIATILVTTGFTRPEEVPTLPIQPDHVLSSLDEWRL
>NC_017053.1|WP_014407538.1|773068_773821_+|acyl-[acyl-carrier-protein]-thioesterase
MGLSYQEELTLPFELCDVKSDIKLPLLLDYCLMVSGRQSAQLGRSNNNLLVDYKLVWIVTDYEITIHRLPHFQETITIETKALSYNKFFCYRQFYIYDQEGGLLVDILAYFALLNPDTRKVATIPEDLVAPFETDFVKKLHRVPKMPLLEQSIDRDYYVRYFDIDMNGHVNNSKYLDWMYDVLGCAFLKTHQPLKMTLKYVKEVSPGGQITSSYHLDQLTSYHQITSDGQLNAQAMIEWRAIKQTESETD
>NC_017053.1|WP_014407537.1|771928_773059_+|oxygen-independent-coproporphyrinogen-III-oxidase
MSKKPTSAYVHIPFCTQICYYCDFSKVFIQNQPVDAYLKALIQEFDSYGIRDLKTLYIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTFNNKQLKQIGRSHNEEQIYSTIANLKAAGFHNISIDLIYALPGQTLDQVKENVAKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLESEMFEYIISEMEANGFEHYEISNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQHYLKAVEAGNARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGMSFEERYGNIVRELQNQGLLVKDDAFVRMTKKGLFLGDSVAERFILD
>NC_017053.1|WP_014407536.1|771224_771866_+|hypothetical-protein
MTKQQIEKLADLLPPFAATLYLDMIPEFQEGYASYVYQTQKQDIQKRRIKQLTKNFERLLDTPSFYVMPVTRKTAEQLLADKGLAYHLLSTVAANQVFAAAVNEDQTLFQVLRNGARVAFVILQEKGEFLEMTLGILETVTENEVPAAIVEAVQAYLLTDMQEKLPSLSIMVSQESSKLFYQEQGFVLLAKGCKPGNENDSDVCQLVKYFSKP
>NC_017053.1|WP_002984856.1|769745_771101_+|phosphoglucosamine-mutase
MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETERPKVFVARDTRISGEMLESALIAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGNDGFKLADDQELEIEALLDAPEDTLPRPSAEGLGTLVDYPEGLRKYEKFLVTTGTDLSGMTVALDTANGAASVSARDVFLDLNAEIAVIGEKPNGLNINDGVGSTHPEQLQELVKETGADLGLAFDGDSDRLIAVDETGEIVDGDRIMFIIGKYLSEKGLLAHNTIVTTVMSNLGFHKALDKQGINKAITAVGDRYVVEEMRSSGYNLGGEQSGHVIIMDYNTTGDGQLTAIQLAKVMKETGKSLSELAAEVTIYPQKLVNIRVENSMKERAMEVPAIANIIAKMEDEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRTEIGCDN
>NC_017053.1|WP_041174363.1|782124_782304_+|nucleoside-diphosphate-kinase
MIKPDGVKQGGVVGEVLRWIERLRLTFKRFELRQASSKYLAKHDEALVINLLILNLKLT
>NC_017053.1|WP_014407544.1|782367_782514_+|hypothetical-protein
MMRVTNPTDALCGTIRGNFAQALNDDGGIFNMVHGSHSRDSARREIAL
>NC_017053.1|WP_014407545.1|782637_784470_+|elongation-factor-4
MNSQDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVDAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLANNPAKEALHGYKQMNPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVHTTDEDMIEVSNPSEFPDPTRVAFIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYDMSEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDTKK
>NC_017053.1|WP_080011069.1|784939_785932_+|LPXTG-cell-wall-anchor-domain-containing-protein
MEAELNRYLETLDENLSQLKGEKGDQGPVGPAGKDGEVGPRGDRGETGPAGPVGPRGDKGEQGLPGKDGEQGERGPQGPAGKDGEAGAQGPAGPKGPRGDKGEQGPAGKDGERGPVGPAGKDGQNGKDGERGPVGPAGKDGQNGKDGERGPVGPAGKDGQNGKDGERGPVGPAGKDGQNGKDGERGPVGPAGKDGQDGKDGLPGKDGKDGQNGKAGLPGKDGKDGQPGKPAPKTPEVPQKPDTAPHTPKTPQIPGQSKDVTPAPQNPSNRGLNKPQTQGGNQLAKTPAAHDTHRQLPATGETTNPFFTAAAVAIMTTAGVVAVAKRQENN
>NC_017053.1|WP_014407546.1|786117_786555_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
METSDELKQRIGDLSYEVTQHAATESPFTGEYDDFFEKGIYVDIVSGEVLFSSLDKFNSGCGWPAFSKPIENRMVTNHDDSSYGMRRVEVKSREAGSHLGHVFSDGPKEAGGLRYCINSAALKFIPYEQMEKEGYAQWLTLFDET
>NC_017053.1|WP_014407547.1|786684_787704_+|YeiH-family-putative-sulfate-export-transporter
MSTHLRKLPGLLLCLLLALPAWCLGRLFPIIGAPVFAILLGMLLALFYEHRDKTKEGISFTSKYILQTAVVLLGFGLNLTQVMAVGMQSLPIIVSTIATALLVAYGSQKWLRLDVNTATLVGVGSSICGGAAIAATAPVIKAKDDEVVKAISVIFLFNMLAALLFPSLGQLLGLSNEGFAIFAGTAVNDTSSVTATATAWDAIHHSNTLDGATIVKLTRTLAILPITLGLSLYQAKKEHDIVTEEGFSLRKSFPRFILFFLLASLITTLMTSLGVSADSFHSLKTLSKFFIVMAMAAIGLNTNLVKLIKTGGQAILLGAICWVAITLVSLAMQLSLGIW
>NC_017053.1|WP_014407548.1|787910_788336_+|PTS-sugar-transporter-subunit-IIA
MKRKFLIGSHGRLASGLQSSIDILAGMGQVLETIDAYVDDSDYTSQIDDFIAGVAADEQGLIFTDLLGGSVNQKMVTAVMNSGKDNIFLITNSNLATLLSLVFLKPGEALTKDEIVTVINESQVQLVDLVPETNSEDDFFD
>NC_017053.1|WP_002984845.1|788362_788854_+|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB
MITQIRVDDRLIHGQVAVVWTKELNAPLLVVANDEAAKNEITQMTLKMAVPNGMKLLIRSVEDSIKLFNDPRAKDKRIFVIVNSVKDACAIAKEVPDLEAVNVANVGRFDKSDPASKVKVTPSLLLNPEEMAAAKELVSLPELDVFNQVLPSNTKVHLSQLVN
>NC_017053.1|WP_002984844.1|788870_789680_+|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC
MLVPATMAALAVLICFGGNYLTGQSMMERPLVVGLVTGLLLGDMKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMVDKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVNAFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAITRGAISKQTTFDSKESEEEDFFA
>NC_017053.1|WP_002989931.1|789676_790504_+|PTS-mannose/fructose/sorbose-transporter-family-subunit-IID
MTSQDNLTKEDRKMLRSVFWRSWTMNASRTGATQYHAVGVIYTLLPVINRFYKTDKDKAEALVRHTTWFNATMHINNFIMGLVASMEKKNSEDPDFDASAITAVKASLMGPISGVGDSFFWGILRVIAAGIGISLASAGSAMGAVVFLLLYNIPAFIIHYYSLYGGYSVGAGFIKKLYESGGIKIVTKTSSMLGLMMVGSMTASNVKFKTILTVAAKGAKEAASIQDYLDQLFIGIVPLMVTLAAFWLLRKKVNINWIMFGIMFLGIILGLLGIC

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448767	Streptococcus phage Javan467, complete genome	5181-5210	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448771	Streptococcus phage Javan481, complete genome	5181-5210	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448973	Streptococcus phage Javan522, complete genome	7086-7115	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448942	Streptococcus phage Javan448, complete genome	5181-5210	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448775	Streptococcus phage Javan489, complete genome	9201-9230	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	5286-5315	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448969	Streptococcus phage Javan514, complete genome	8127-8156	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448794	Streptococcus phage Javan525, complete genome	7396-7425	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448964	Streptococcus phage Javan502, complete genome	5166-5195	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448943	Streptococcus phage Javan450, complete genome	5181-5210	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448972	Streptococcus phage Javan520, complete genome	5181-5210	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448786	Streptococcus phage Javan509, complete genome	5181-5210	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448774	Streptococcus phage Javan487, complete genome	5166-5195	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448778	Streptococcus phage Javan493, complete genome	7101-7130	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448963	Streptococcus phage Javan498, complete genome	1771-1800	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448773	Streptococcus phage Javan485, complete genome	8127-8156	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448958	Streptococcus phage Javan486, complete genome	7410-7439	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448777	Streptococcus phage Javan491, complete genome	5540-5569	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448765	Streptococcus phage Javan459, complete genome	7396-7425	0	1.0
NC_017053_1	1.2\|781863\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781863-781892	30	MK448950	Streptococcus phage Javan464, complete genome	18080-18109	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448871	Streptococcus phage Javan196, complete genome	36731-36760	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448942	Streptococcus phage Javan448, complete genome	21979-22008	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448952	Streptococcus phage Javan472, complete genome	36146-36175	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448792	Streptococcus phage Javan521, complete genome	35673-35702	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448976	Streptococcus phage Javan528, complete genome	34640-34669	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448964	Streptococcus phage Javan502, complete genome	30836-30865	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448697	Streptococcus phage Javan185, complete genome	36731-36760	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448944	Streptococcus phage Javan452, complete genome	38957-38986	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	NC_004584	Streptococcus prophage 315.1, complete genome	35266-35295	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448693	Streptococcus phage Javan177, complete genome	36731-36760	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448696	Streptococcus phage Javan183, complete genome	36731-36760	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448963	Streptococcus phage Javan498, complete genome	26624-26653	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448958	Streptococcus phage Javan486, complete genome	35929-35958	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448770	Streptococcus phage Javan477, complete genome	35673-35702	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448868	Streptococcus phage Javan188, complete genome	36732-36761	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448978	Streptococcus phage Javan532, complete genome	35160-35189	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448866	Streptococcus phage Javan184, complete genome	36731-36760	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448785	Streptococcus phage Javan507, complete genome	35161-35190	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448950	Streptococcus phage Javan464, complete genome	36187-36216	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448764	Streptococcus phage Javan457, complete genome	28685-28714	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448699	Streptococcus phage Javan189, complete genome	36731-36760	0	1.0
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448867	Streptococcus phage Javan186, complete genome	36731-36760	0	1.0
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448681	Streptococcus phage Javan141, complete genome	5259-5288	1	0.967
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448771	Streptococcus phage Javan481, complete genome	30536-30565	1	0.967
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448941	Streptococcus phage Javan446, complete genome	38393-38422	1	0.967
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448962	Streptococcus phage Javan496, complete genome	26804-26833	1	0.967
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448852	Streptococcus phage Javan140, complete genome	36141-36170	2	0.933
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448675	Streptococcus phage Javan129, complete genome	39056-39085	2	0.933
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448858	Streptococcus phage Javan166, complete genome	42024-42053	2	0.933
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448769	Streptococcus phage Javan471, complete genome	31427-31456	2	0.933
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448684	Streptococcus phage Javan151, complete genome	31427-31456	2	0.933
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448690	Streptococcus phage Javan169, complete genome	38710-38739	2	0.933
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	NC_009819	Streptococcus phage P9, complete genome	35694-35723	2	0.933
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448850	Streptococcus phage Javan132, complete genome	38156-38185	2	0.933
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448854	Streptococcus phage Javan146, complete genome	38718-38747	2	0.933
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448845	Streptococcus phage Javan118, complete genome	32768-32797	2	0.933
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448676	Streptococcus phage Javan131, complete genome	41053-41082	2	0.933
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448954	Streptococcus phage Javan476, complete genome	35589-35618	2	0.933
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448678	Streptococcus phage Javan135, complete genome	35657-35686	2	0.933
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448673	Streptococcus phage Javan119, complete genome	41993-42022	2	0.933
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448865	Streptococcus phage Javan182, complete genome	28853-28882	3	0.9
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	MK448679	Streptococcus phage Javan137, complete genome	34027-34056	3	0.9
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448944	Streptococcus phage Javan452, complete genome	9327-9356	4	0.867
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448672	Streptococcus phage Javan117, complete genome	4909-4938	4	0.867
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448849	Streptococcus phage Javan128, complete genome	5002-5031	4	0.867
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448685	Streptococcus phage Javan155, complete genome	6037-6066	5	0.833
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK449010	Streptococcus phage Javan90, complete genome	7686-7715	5	0.833
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK449012	Streptococcus phage Javan94, complete genome	6927-6956	5	0.833
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448690	Streptococcus phage Javan169, complete genome	8398-8427	5	0.833
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448845	Streptococcus phage Javan118, complete genome	6802-6831	5	0.833
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448833	Streptococcus phage Javan87, complete genome	7686-7715	5	0.833
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448853	Streptococcus phage Javan144, complete genome	6037-6066	5	0.833
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448673	Streptococcus phage Javan119, complete genome	8277-8306	5	0.833
NC_017053_1	1.2\|781863\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781863-781892	30	KU234532	Nostoc phage N1, complete genome	59810-59839	6	0.8
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	NZ_CP007187	Campylobacter coli RM1875 plasmid pRM1875_3.4kbp, complete sequence	137-166	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448946	Streptococcus phage Javan456, complete genome	7320-7349	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448852	Streptococcus phage Javan140, complete genome	4538-4567	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448871	Streptococcus phage Javan196, complete genome	4760-4789	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448784	Streptococcus phage Javan505, complete genome	4537-4566	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448952	Streptococcus phage Javan472, complete genome	4659-4688	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448779	Streptococcus phage Javan497, complete genome	4589-4618	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448947	Streptococcus phage Javan458, complete genome	4537-4566	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448976	Streptococcus phage Javan528, complete genome	4758-4787	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448961	Streptococcus phage Javan494, complete genome	4758-4787	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448697	Streptococcus phage Javan185, complete genome	4760-4789	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448968	Streptococcus phage Javan512, complete genome	4589-4618	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448693	Streptococcus phage Javan177, complete genome	4760-4789	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448766	Streptococcus phage Javan465, complete genome	5723-5752	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448696	Streptococcus phage Javan183, complete genome	4760-4789	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	NC_009819	Streptococcus phage P9, complete genome	4755-4784	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448797	Streptococcus phage Javan531, complete genome	4589-4618	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448689	Streptococcus phage Javan163, complete genome	4537-4566	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448868	Streptococcus phage Javan188, complete genome	4760-4789	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448866	Streptococcus phage Javan184, complete genome	4760-4789	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448974	Streptococcus phage Javan524, complete genome	4538-4567	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	FN667788	Campylobacter phage CP220, complete genome	105962-105991	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448699	Streptococcus phage Javan189, complete genome	4760-4789	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448789	Streptococcus phage Javan513, complete genome	4537-4566	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448678	Streptococcus phage Javan135, complete genome	4536-4565	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	NC_004589	Streptococcus prophage 315.6, complete genome	4686-4715	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MK448867	Streptococcus phage Javan186, complete genome	4760-4789	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	NZ_CP040048	Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence	541054-541083	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	NC_019507	Campylobacter phage CP21, complete genome	173639-173668	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	HE815464	Campylobacter phage CP21 complete sequence	173639-173668	7	0.767
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	NC_041834	Campylobacter phage vB_CcoM-IBB_35 clone Contig5, complete sequence	19482-19511	7	0.767
NC_017053_1	1.2\|781863\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781863-781892	30	NC_004949	Helicobacter pylori plasmid pHel5 complete sequence	4144-4173	7	0.767
NC_017053_1	1.2\|781863\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781863-781892	30	MT219824	Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence	247794-247823	7	0.767
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	KM378617	Vibrio phage VpKK5, complete genome	6193-6222	7	0.767
NC_017053_1	1.3\|781929\|30\|NC_017053\|CRISPRCasFinder,CRT	781929-781958	30	NZ_CP032280	Acinetobacter sp. WCHA55 plasmid p1_010055, complete sequence	69725-69754	8	0.733
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MN657125	Psychrobacter sp. strain ANT_P59 plasmid pA59P2, complete sequence	1341-1370	9	0.7
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	LR588166	Pseudomonas phage vB_PaeM_MIJ3	57360-57389	10	0.667
NC_017053_1	1.1\|781797\|30\|NC_017053\|PILER-CR,CRISPRCasFinder,CRT	781797-781826	30	MH121069	Pseudomonas phage vB_PaeM_PA5oct, complete genome	173899-173928	10	0.667

1. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

2. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

3. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

4. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

5. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

6. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

7. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448969 (Streptococcus phage Javan514, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

8. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

9. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

10. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

11. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

12. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

13. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

14. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

15. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448963 (Streptococcus phage Javan498, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

16. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

17. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

18. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

19. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 0, identity: 1.0

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagtgaagact	Protospacer
******************************

20. spacer 1.2|781863|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 0, identity: 1.0

tgacgaaattattaaacgttgttctgggga	CRISPR spacer
tgacgaaattattaaacgttgttctgggga	Protospacer
******************************

21. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

22. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

23. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448952 (Streptococcus phage Javan472, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

24. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

25. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

26. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

27. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

28. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

29. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

30. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

31. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

32. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448963 (Streptococcus phage Javan498, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

33. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

34. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

35. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

36. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

37. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

38. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

39. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

40. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448764 (Streptococcus phage Javan457, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

41. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

42. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 0, identity: 1.0

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagc	Protospacer
******************************

43. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 1, identity: 0.967

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttaaatttagcgaagact	Protospacer
**********************.*******

44. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 1, identity: 0.967

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagt	Protospacer
*****************************.

45. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448941 (Streptococcus phage Javan446, complete genome) position: , mismatch: 1, identity: 0.967

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagt	Protospacer
*****************************.

46. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 1, identity: 0.967

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggacttagttaagt	Protospacer
*****************************.

47. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448852 (Streptococcus phage Javan140, complete genome) position: , mismatch: 2, identity: 0.933

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaaatatgcggatttagttaagc	Protospacer
**********.********.**********

48. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 2, identity: 0.933

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcatcaaatatgcggacttagttaagc	Protospacer
*******.**.*******************

49. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 2, identity: 0.933

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggatctagttaagc	Protospacer
*******************..*********

50. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448769 (Streptococcus phage Javan471, complete genome) position: , mismatch: 2, identity: 0.933

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggatctagttaagc	Protospacer
*******************..*********

51. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448684 (Streptococcus phage Javan151, complete genome) position: , mismatch: 2, identity: 0.933

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggatctagttaagc	Protospacer
*******************..*********

52. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 2, identity: 0.933

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggatctagttaagc	Protospacer
*******************..*********

53. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 2, identity: 0.933

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagttattaaatatgcggacttagttaagc	Protospacer
****.*****.*******************

54. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 2, identity: 0.933

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcatcaaatatgcggacttagttaagc	Protospacer
*******.**.*******************

55. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 2, identity: 0.933

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaaatatgcggatttagttaagc	Protospacer
**********.********.**********

56. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 2, identity: 0.933

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagttattaaatatgcggacttagttaagc	Protospacer
****.*****.*******************

57. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 2, identity: 0.933

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggatctagttaagc	Protospacer
*******************..*********

58. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 2, identity: 0.933

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcatcaaatatgcggacttagttaagc	Protospacer
*******.**.*******************

59. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 2, identity: 0.933

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaagtatgcggatctagttaagc	Protospacer
*******************..*********

60. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 2, identity: 0.933

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cggtcattaaatatgcggacttagttaagc	Protospacer
*.********.*******************

61. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448865 (Streptococcus phage Javan182, complete genome) position: , mismatch: 3, identity: 0.9

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcattaaatatgcggacttagttaaag	Protospacer
**********.*****************.

62. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 3, identity: 0.9

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
cagtcatcaaatatgcggacttagttaaac	Protospacer
*******.**.*****************.*

63. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 4, identity: 0.867

aatccaatgattttaaatttagtgaagact	CRISPR spacer
agttcaatgactttaaatttagcgaagact	Protospacer
*.*.******.***********.*******

64. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 4, identity: 0.867

aatccaatgattttaaatttagtgaagact	CRISPR spacer
agttcaaggattttaaatttagcgaagact	Protospacer
*.*.*** **************.*******

65. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 4, identity: 0.867

aatccaatgattttaaatttagtgaagact	CRISPR spacer
agttcaatgactttaaatttagcgaagact	Protospacer
*.*.******.***********.*******

66. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448685 (Streptococcus phage Javan155, complete genome) position: , mismatch: 5, identity: 0.833

aatccaatgattttaaatttagtgaagact	CRISPR spacer
agttcgatgattttaaatttagcgacgact	Protospacer
*.*.*.****************.** ****

67. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 5, identity: 0.833

aatccaatgattttaaatttagtgaagact	CRISPR spacer
agttcgatgactttaaatttagcgaagact	Protospacer
*.*.*.****.***********.*******

68. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK449012 (Streptococcus phage Javan94, complete genome) position: , mismatch: 5, identity: 0.833

aatccaatgattttaaatttagtgaagact	CRISPR spacer
agttcgatgactttaaatttagcgaagact	Protospacer
*.*.*.****.***********.*******

69. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 5, identity: 0.833

aatccaatgattttaaatttagtgaagact	CRISPR spacer
agttcgatgactttaaatttagcgaagact	Protospacer
*.*.*.****.***********.*******

70. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 5, identity: 0.833

aatccaatgattttaaatttagtgaagact	CRISPR spacer
agttcgatgactttaaatttagcgaagact	Protospacer
*.*.*.****.***********.*******

71. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 5, identity: 0.833

aatccaatgattttaaatttagtgaagact	CRISPR spacer
agttcgatgactttaaatttagcgaagact	Protospacer
*.*.*.****.***********.*******

72. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448853 (Streptococcus phage Javan144, complete genome) position: , mismatch: 5, identity: 0.833

aatccaatgattttaaatttagtgaagact	CRISPR spacer
agttcgatgattttaaatttagcgacgact	Protospacer
*.*.*.****************.** ****

73. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 5, identity: 0.833

aatccaatgattttaaatttagtgaagact	CRISPR spacer
agttcaatgactttaaatttagcgaagatt	Protospacer
*.*.******.***********.*****.*

74. spacer 1.2|781863|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to KU234532 (Nostoc phage N1, complete genome) position: , mismatch: 6, identity: 0.8

tgacgaaattattaaacgttgttctgggga	CRISPR spacer
tggtaaatctattaaacgttcttctgggga	Protospacer
**...** .*********** *********

75. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007187 (Campylobacter coli RM1875 plasmid pRM1875_3.4kbp, complete sequence) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
atgccaatgattttaaaattaatgaaaagc	Protospacer
*  ************** ***.****.* .

76. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

77. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448852 (Streptococcus phage Javan140, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

78. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

79. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

80. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448952 (Streptococcus phage Javan472, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aagtaaatgattttaaattcagtgaaactt	Protospacer
** . **************.******. .*

81. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448779 (Streptococcus phage Javan497, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

82. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

83. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

84. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

85. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

86. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448968 (Streptococcus phage Javan512, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

87. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

88. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aagtaaatgattttaaattcagtgaaactt	Protospacer
** . **************.******. .*

89. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

90. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

91. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448797 (Streptococcus phage Javan531, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

92. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

93. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

94. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

95. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

96. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to FN667788 (Campylobacter phage CP220, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttacattaagttcacaag	Protospacer
*************** *** ***  * *

97. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

98. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

99. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

100. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to NC_004589 (Streptococcus prophage 315.6, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

101. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aaggaaatgattttaaattcagtgaaactt	Protospacer
**   **************.******. .*

102. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040048 (Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
acttgagtgaatttaaatttagtgaagaaa	Protospacer
* *. *.*** *****************

103. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to NC_019507 (Campylobacter phage CP21, complete genome) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttacattaagttcacaag	Protospacer
*************** *** ***  * *

104. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to HE815464 (Campylobacter phage CP21 complete sequence) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttacattaagttcacaag	Protospacer
*************** *** ***  * *

105. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to NC_041834 (Campylobacter phage vB_CcoM-IBB_35 clone Contig5, complete sequence) position: , mismatch: 7, identity: 0.767

aatccaatgattttaaatttagtgaagact	CRISPR spacer
aatccaatgattttacattaagttcacaag	Protospacer
*************** *** ***  * *

106. spacer 1.2|781863|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to NC_004949 (Helicobacter pylori plasmid pHel5 complete sequence) position: , mismatch: 7, identity: 0.767

tgacgaaattattaaacgttgttctgggga	CRISPR spacer
caacgaaattattaagcgttgtttcggcta	Protospacer
..*************.*******..**  *

107. spacer 1.2|781863|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 7, identity: 0.767

tgacgaaattattaaacgttgttctgggga	CRISPR spacer
tgactaaattattaaatgttgttgtcgtct	Protospacer
**** ***********.****** * *

108. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to KM378617 (Vibrio phage VpKK5, complete genome) position: , mismatch: 7, identity: 0.767

-cagtcattaagtatgcggacttagttaagc	CRISPR spacer
acaagga-aaagaatgcggacttagttaagg	Protospacer
 **.  *  *** *****************

109. spacer 1.3|781929|30|NC_017053|CRISPRCasFinder,CRT matches to NZ_CP032280 (Acinetobacter sp. WCHA55 plasmid p1_010055, complete sequence) position: , mismatch: 8, identity: 0.733

cagtcattaagtatgcggacttagttaagc	CRISPR spacer
aattgattaagtatgcggacttggttgttt	Protospacer
 * * *****************.***.  .

110. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MN657125 (Psychrobacter sp. strain ANT_P59 plasmid pA59P2, complete sequence) position: , mismatch: 9, identity: 0.7

aatccaatgattttaaatttagtgaagact	CRISPR spacer
tgcataatgatattaaatttagtgaagctg	Protospacer
 .. .****** *************** .

111. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to LR588166 (Pseudomonas phage vB_PaeM_MIJ3) position: , mismatch: 10, identity: 0.667

aatccaatgattttaaatttagtgaagact	CRISPR spacer
ttctcaaagattttaaatttagtgatagag	Protospacer
  ..*** ***************** ..

112. spacer 1.1|781797|30|NC_017053|PILER-CR,CRISPRCasFinder,CRT matches to MH121069 (Pseudomonas phage vB_PaeM_PA5oct, complete genome) position: , mismatch: 10, identity: 0.667

aatccaatgattttaaatttagtgaagact	CRISPR spacer
ttctcaaagattttaaatttagtgatagag	Protospacer
  ..*** ***************** ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

30861 : 43174

Synechococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041174317.1\|30861_34587_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	3.0e-39	26.9
WP_009880323.1\|34747_36202_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.7e-54	32.7
WP_014407190.1\|36229_37252_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FGG1	Synechococcus_phage	1.2e-62	41.1
WP_014407191.1\|37419_37974_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.8e-25	36.1
WP_014407192.1\|38157_39705_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	4.4e-45	52.4
WP_014407193.1\|39762_40887_-	CHAP domain-containing protein	F8HGP2	Streptococcus_phage	7.7e-07	28.6
WP_041174318.1\|41139_42405_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_041174354.1\|42682_43174_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	3.2e-18	42.3

DBSCAN-SWA_2

332321 : 338357

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041174327.1\|332321_332957_+	dTMP kinase	M1PSC7	Streptococcus_phage	2.7e-65	63.4
WP_002985844.1\|332974_333850_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.1e-68	46.6
WP_014407337.1\|333868_334108_+	hypothetical protein	NA	NA	NA	NA
WP_002985838.1\|334512_334836_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	1.3e-28	59.4
WP_014407339.1\|334840_335704_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	5.5e-114	74.0
WP_002985833.1\|335730_336123_+	hypothetical protein	NA	NA	NA	NA
WP_014407340.1\|336169_336799_-	CutC domain-containing protein	NA	NA	NA	NA
WP_014407341.1\|337099_337456_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.8e-39	65.0
WP_002990895.1\|337529_338357_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	2.9e-128	79.5

DBSCAN-SWA_3

625358 : 635961

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014407484.1\|625358_627569_-	LTA synthase family protein	W6LM83	Streptococcus_phage	8.5e-268	68.9
WP_002985142.1\|627676_628840_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
WP_002985140.1\|628836_629523_+	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	7.0e-88	68.9
WP_002992640.1\|629616_630783_+	chorismate synthase	A0A291AU41	Pandoravirus	5.8e-34	32.8
WP_002992643.1\|630843_631185_+	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	5.9e-19	41.1
WP_002992646.1\|631405_632758_+	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	1.0e-29	23.8
WP_002990257.1\|632845_634114_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_014407485.1\|634143_634584_-	membrane protein	NA	NA	NA	NA
WP_002985123.1\|634818_635961_+	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	4.1e-24	27.0

DBSCAN-SWA_4

1057827 : 1145809

Streptococcus_phage(58.46%)

holin,terminase,integrase,tRNA,portal,protease,head,capsid,tail

attL 1098923:1098942|attR 1143194:1143213

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002984013.1\|1057827_1058523_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_014407666.1\|1058541_1059303_-	DUF3169 family protein	NA	NA	NA	NA
WP_011054648.1\|1059299_1059515_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014407667.1\|1059875_1062494_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	6.7e-62	33.9
WP_014407668.1\|1062880_1063936_-	peptidylprolyl isomerase PrsA	NA	NA	NA	NA
WP_002989211.1\|1063998_1064706_-	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	2.6e-08	27.2
WP_011054651.1\|1064771_1065968_-	OFA family MFS transporter	NA	NA	NA	NA
WP_011054652.1\|1066343_1068149_-	oligoendopeptidase F	NA	NA	NA	NA
WP_014407670.1\|1068161_1069124_-	competence protein CoiA	NA	NA	NA	NA
WP_002995774.1\|1069420_1070137_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_002995779.1\|1070255_1070960_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_002995782.1\|1071161_1072190_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_002983986.1\|1072196_1073417_+	DUF3114 domain-containing protein	NA	NA	NA	NA
WP_002983984.1\|1073530_1074121_-	peptidase S11	NA	NA	NA	NA
WP_011054656.1\|1074117_1074366_-	hypothetical protein	NA	NA	NA	NA
WP_011054657.1\|1074350_1074578_-	hypothetical protein	NA	NA	NA	NA
WP_011054658.1\|1074744_1075350_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	1.8e-58	53.2
WP_011888795.1\|1075446_1076487_-	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_014407671.1\|1076557_1078801_-	DNA internalization-related competence protein ComEC/Rec2	M1PSD2	Streptococcus_phage	1.8e-55	59.2
WP_002983967.1\|1078781_1079444_-	ComEA family DNA-binding protein	NA	NA	NA	NA
WP_014407672.1\|1079643_1080462_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_010922438.1\|1080501_1081278_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_002989164.1\|1081267_1081546_+	GIY-YIG nuclease family protein	W8W2G4	Invertebrate_iridovirus	1.8e-05	36.0
WP_014407674.1\|1081569_1083570_-	potassium transporter Kup	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	2.2e-65	33.8
WP_014407675.1\|1083697_1085317_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.0e-60	36.8
WP_014407676.1\|1085623_1087168_-	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	1.4e-35	29.1
WP_014407678.1\|1087415_1088111_-	TIGR02206 family membrane protein	NA	NA	NA	NA
WP_010922441.1\|1088190_1089582_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_002989146.1\|1089772_1090819_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_002983939.1\|1090919_1091516_-	recombination protein RecR	NA	NA	NA	NA
WP_014407679.1\|1091562_1091754_-	hypothetical protein	NA	NA	NA	NA
WP_014407680.1\|1092314_1093094_-	formate/nitrite transporter family protein	NA	NA	NA	NA
WP_002989140.1\|1093217_1093760_-	hypothetical protein	NA	NA	NA	NA
WP_014407681.1\|1093920_1094442_-	transcription repressor NadR	NA	NA	NA	NA
WP_002983928.1\|1094550_1095246_-	phosphoglycerate mutase	NA	NA	NA	NA
WP_014407682.1\|1095484_1096420_+	dihydroorotate oxidase	A0A1V0SH91	Hokovirus	7.9e-66	45.1
WP_014407683.1\|1096719_1098582_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.6e-89	33.7
1098923:1098942	attL	NA	NA	NA	NA
WP_011017964.1\|1099111_1099294_-	hypothetical protein	A3F673	Streptococcus_phage	1.4e-19	76.7
WP_011106694.1\|1099358_1099646_-	hypothetical protein	Q938I9	Temperate_phage	2.4e-29	100.0
WP_011054727.1\|1099639_1100215_-	hypothetical protein	Q938J0	Temperate_phage	1.7e-111	100.0
WP_011054728.1\|1100690_1101470_-	streptococcal pyrogenic exotoxin SpeK	Q938J1	Temperate_phage	5.4e-145	100.0
WP_011054729.1\|1101774_1102641_-	DUF334 domain-containing protein	Q938J2	Temperate_phage	3.7e-134	100.0
WP_011017840.1\|1102628_1103153_-	DUF4065 domain-containing protein	Q938J3	Temperate_phage	4.0e-99	100.0
WP_014411848.1\|1103292_1104501_-	CHAP domain-containing protein	Q938J4	Temperate_phage	8.6e-214	86.8
WP_003058873.1\|1104616_1104844_-\|holin	phage holin	A7J2B3	Streptococcus_phage	2.0e-31	100.0
WP_002987582.1\|1104840_1105116_-	hypothetical protein	A7J2B2	Streptococcus_phage	2.6e-41	100.0
WP_014411849.1\|1105125_1105764_-	hypothetical protein	A3F662	Streptococcus_phage	3.4e-44	53.2
WP_014411850.1\|1105766_1106195_-	DUF1617 family protein	A3F661	Streptococcus_phage	1.7e-63	86.5
WP_014411851.1\|1106206_1108093_-	hypothetical protein	Q938J9	Temperate_phage	1.3e-203	86.5
WP_014411852.1\|1108105_1109128_-	hyaluronoglucosaminidase	Q938K0	Temperate_phage	1.2e-168	91.7
WP_014411853.1\|1109124_1111269_-	peptidase	Q938K1	Temperate_phage	0.0e+00	93.3
WP_014411854.1\|1111265_1111973_-	hypothetical protein	Q938K2	Temperate_phage	1.7e-92	71.1
WP_014411855.1\|1111972_1115896_-\|tail	phage tail tape measure protein	J7KDT4	Streptococcus_phage	1.9e-238	48.7
WP_014411857.1\|1116105_1116432_-	hypothetical protein	J7KK85	Streptococcus_phage	6.0e-37	73.1
WP_014411858.1\|1116484_1117093_-\|tail	phage major tail protein	J7KKC8	Streptococcus_phage	2.3e-74	70.5
WP_002985347.1\|1117109_1117535_-	hypothetical protein	J7KBZ9	Streptococcus_phage	5.0e-68	85.1
WP_002985349.1\|1117531_1117909_-	HK97 gp10 family phage protein	J7KDM3	Streptococcus_phage	1.4e-45	72.8
WP_002985351.1\|1117905_1118253_-\|head	phage head closure protein	J7KJ42	Streptococcus_phage	1.5e-49	85.5
WP_014411860.1\|1118249_1118552_-	hypothetical protein	J7KC36	Streptococcus_phage	6.1e-44	87.0
WP_014411862.1\|1118687_1119890_-\|capsid	phage major capsid protein	J7KJ82	Streptococcus_phage	6.0e-135	64.4
WP_014411863.1\|1120563_1121784_-\|portal	phage portal protein	J7KDU3	Streptococcus_phage	2.0e-186	81.7
WP_002985363.1\|1121817_1122042_-	hypothetical protein	Q938K9	Temperate_phage	3.6e-17	61.4
WP_014411864.1\|1122201_1123956_-\|terminase	terminase large subunit	J7KKD1	Streptococcus_phage	0.0e+00	96.2
WP_002985371.1\|1123970_1124438_-\|terminase	phage terminase small subunit P27 family	J7KC46	Streptococcus_phage	3.9e-82	98.7
WP_002985375.1\|1124608_1124947_-	HNH endonuclease	J7KH36	Streptococcus_phage	3.0e-55	90.7
WP_014411867.1\|1125531_1125972_-	ArpU family transcriptional regulator	Q938L8	Temperate_phage	1.9e-78	99.3
WP_014411868.1\|1126247_1126619_-	hypothetical protein	NA	NA	NA	NA
WP_014411869.1\|1126615_1127326_-	DUF1642 domain-containing protein	Q938L9	Temperate_phage	3.0e-25	46.2
WP_011018133.1\|1127328_1127961_-	SAM-dependent DNA methyltransferase	L0P368	Streptococcus_phage	2.3e-85	68.6
WP_014411870.1\|1127962_1128247_-	hypothetical protein	A0A097PAV1	Streptococcus_pyogenes_phage	1.4e-37	89.4
WP_014411871.1\|1128243_1128648_-	hypothetical protein	A3F627	Streptococcus_phage	1.6e-39	65.2
WP_002987593.1\|1128657_1128927_-	hypothetical protein	A0A1P8VVR6	Streptococcus_phage	3.1e-47	100.0
WP_014411872.1\|1128923_1129208_-	DUF3310 domain-containing protein	A0A1P8VVP5	Streptococcus_phage	2.2e-48	96.8
WP_011054576.1\|1129779_1130100_-	VRR-NUC domain-containing protein	A0A1P8VVL5	Streptococcus_phage	7.1e-51	94.3
WP_008087509.1\|1130096_1130510_-	hypothetical protein	A0A2H4JHE6	uncultured_Caudovirales_phage	2.8e-15	50.0
WP_014411876.1\|1130771_1132247_-	DNA primase	A0A1P8VVM0	Streptococcus_phage	2.9e-248	86.7
WP_014411877.1\|1132236_1133049_-	hypothetical protein	A0A1P8VVM6	Streptococcus_phage	1.3e-152	97.4
WP_011054580.1\|1133051_1133510_-	DUF669 domain-containing protein	A0A1P8VVN0	Streptococcus_phage	5.0e-82	99.3
WP_011528546.1\|1133525_1134755_-	DEAD/DEAH box helicase	A0A1P8VVM2	Streptococcus_phage	3.3e-237	100.0
WP_014411878.1\|1134856_1135537_-	AAA family ATPase	A0A1P8VVS4	Streptococcus_phage	6.2e-129	99.6
WP_011054820.1\|1135537_1136020_-	siphovirus Gp157 family protein	A0A1P8VVS5	Streptococcus_phage	4.6e-78	99.4
WP_014411879.1\|1136167_1136482_-	helix-turn-helix transcriptional regulator	A0A1P8VVN6	Streptococcus_phage	1.3e-49	94.2
WP_014411880.1\|1136633_1136945_-	hypothetical protein	A0A1S5SA25	Streptococcus_phage	1.4e-43	78.6
WP_011054585.1\|1137022_1137208_-	helix-turn-helix transcriptional regulator	A0A1X9I6I3	Streptococcus_phage	3.3e-16	72.1
WP_011284879.1\|1137374_1137614_+	hypothetical protein	NA	NA	NA	NA
WP_002984292.1\|1137764_1137974_+	hypothetical protein	NA	NA	NA	NA
WP_041174345.1\|1138226_1139033_+	TIGR02391 family protein	A0A1S5SBU1	Streptococcus_phage	5.1e-122	81.7
WP_010922204.1\|1138967_1139234_-	hypothetical protein	A0A1S5SC19	Streptococcus_phage	1.1e-23	66.3
WP_014411882.1\|1139244_1139484_-	helix-turn-helix transcriptional regulator	A0A097PBE6	Streptococcus_pyogenes_phage	1.4e-35	98.7
WP_011284882.1\|1139577_1140177_+	hypothetical protein	A0A097PAT4	Streptococcus_pyogenes_phage	3.1e-108	100.0
WP_011285583.1\|1140206_1140365_-	hypothetical protein	A0A097PAP2	Streptococcus_pyogenes_phage	4.8e-24	100.0
WP_014411883.1\|1140737_1141526_+	phage repressor protein	A0A1S5SD15	Streptococcus_phage	2.0e-86	63.0
WP_011106738.1\|1141535_1141841_+	membrane protein	NA	NA	NA	NA
WP_003051793.1\|1141963_1143106_+\|integrase	site-specific integrase	M1NRJ9	Streptococcus_phage	2.4e-173	77.4
WP_002983920.1\|1143195_1143471_-	DNA-binding protein HU	A7KV42	Bacillus_phage	2.6e-25	73.0
1143194:1143213	attR	NA	NA	NA	NA
WP_010922482.1\|1143569_1144157_-	YpmS family protein	NA	NA	NA	NA
WP_010922483.1\|1144134_1144995_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_002989125.1\|1144969_1145809_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	7.0e-13	35.7

DBSCAN-SWA_5

1706239 : 1719305

Streptococcus_phage(72.73%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014411911.1\|1706239_1707031_-	helix-turn-helix transcriptional regulator	A0A1S5SE31	Streptococcus_phage	7.5e-09	48.5
WP_003045754.1\|1707098_1707356_+	hypothetical protein	NA	NA	NA	NA
WP_002992501.1\|1707410_1707818_+	hypothetical protein	A0A1X9I5V7	Streptococcus_phage	1.3e-49	69.4
WP_014411912.1\|1707831_1708449_+	Rha family transcriptional regulator	A0A159B6D5	Gordonia_phage	6.3e-11	38.8
WP_014407939.1\|1708682_1709015_+	hypothetical protein	NA	NA	NA	NA
WP_080011075.1\|1709014_1709206_+	hypothetical protein	NA	NA	NA	NA
WP_000206026.1\|1709217_1709580_+	hypothetical protein	NA	NA	NA	NA
WP_000174505.1\|1709576_1709906_+	hypothetical protein	NA	NA	NA	NA
WP_014407941.1\|1709908_1710181_+	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	1.6e-19	61.2
WP_014407942.1\|1710181_1711039_+	hypothetical protein	A0A1X9I6L2	Streptococcus_phage	2.4e-125	75.2
WP_014407943.1\|1711007_1712696_+	DNA primase	A0A1X9I717	Streptococcus_phage	2.5e-259	82.1
WP_000694577.1\|1712982_1713156_+	hypothetical protein	A0A1X9I5U0	Streptococcus_phage	1.9e-10	59.6
WP_014407945.1\|1713336_1713846_+	hypothetical protein	A0A1X9I5U4	Streptococcus_phage	1.1e-29	63.5
WP_014407946.1\|1713919_1714408_+	hypothetical protein	A0A1X9I5V2	Streptococcus_phage	2.0e-44	54.3
WP_014407947.1\|1714814_1715177_+	DUF1492 domain-containing protein	NA	NA	NA	NA
WP_014407948.1\|1715151_1715535_+	DUF1492 domain-containing protein	Q938L8	Temperate_phage	6.4e-14	40.2
WP_014407949.1\|1715699_1716353_+	hypothetical protein	NA	NA	NA	NA
WP_014407950.1\|1716749_1719305_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	2.3e-43	23.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage