CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_017860	Prevotella intermedia 17 chromosome I, complete sequence	2 crisprs	Csx28,cas13b,DEDDh	0	12	2	0
NC_017861	Prevotella intermedia 17 chromosome II, complete sequence	1 crisprs	cas3,cas9,cas1,cas2,WYL,PD-DExK,DEDDh	0	23	1	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_017860_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017860_1

194523-195607

VI-B2

Consensus_repeat	Method
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	PILER-CR
GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAAC	CRISPRCasFinder
GTTGTTTTTACCTTGCAAACAGCAGGCAGAT	CRT

16 spacers

Csx28,cas13b

The CRISPR arrays of NC_017860_1

>merge|NC_017860|1|194523-195607|PILER-CR,CRISPRCasFinder,CRT
GTTGTTTGTGCCTTGCAAACAGCAGGCAGATGCAACAAAAATCAGTCCTTCCGCTATTGGAATGCTGTTATTTTTACCTTGCAAACAGCAGGCAGATGCAACAGCTGAGTTTGAAGCTAAAATTCTCGCTGAGTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACTGTGTTCTAAAAGAGTACATTACCATAGGGTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACTTTTATCTACTTTCACGTATTGTTAAGGAGTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACTTATTATCACACTGTTAAAGATTGGAGTGAGTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACAGAAACAAATATTGAGGAAAAATTAAAATCGTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACGGTAAAGTGAACGAGCTCATTGCCAACAAGTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACTAGGTCAATTGTGCCACAAAACAAATAAGTTGTTTTTACCTTGCAAACAGCAGGCAGATACAACTTGTTCTTAGATGAGTTAACCACATGTAATGTTGTTTTTACCTTGCAAACAGCAGGCAGATACAACCTTACTACTTTCATTGCTAACGTACTCTTGGTTGTTTTTACCTTGCAAACAGCAGGCAGATACAACGTATGGTTACGAACTTGTTCTTGCCAGAGTGTTGTTTTTACCTTGCAAACAGCAGGCAGATACAACTGGTGCTAAGAGCGTAAAGGACCTTAAGGTGTTGTTTTTACCTTGCAAACAGCAGGCAGATACAACAGATACTATAATAGAACTATATCAAGAATTGTTGTTTTTACCTTGCAAACAGCAGGCAGATACAACATACAGGAGCAAGAATAGAACTATTAAGAAGTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACTTATTAGATTATCGCTTTGTAGTTGATGTGTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACGGCTATGGAAAACGTAGACGCAAACGCTAGTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC

>NC_017860|1|1|194523-195607|PILER-CR
GTTGTTTGTGCCTTGCAAACAGCAGGCAGATGCAAC	AAAAATCAGTCCTTCCGCTATTGGAATGCT
GTTATTTTTACCTTGCAAACAGCAGGCAGATGCAAC	AGCTGAGTTTGAAGCTAAAATTCTCGCTGA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	TGTGTTCTAAAAGAGTACATTACCATAGG
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	TTTTATCTACTTTCACGTATTGTTAAGGA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	TTATTATCACACTGTTAAAGATTGGAGTGA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	AGAAACAAATATTGAGGAAAAATTAAAATC
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	GGTAAAGTGAACGAGCTCATTGCCAACAA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	TAGGTCAATTGTGCCACAAAACAAATAA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAAC	TTGTTCTTAGATGAGTTAACCACATGTAAT
GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAAC	CTTACTACTTTCATTGCTAACGTACTCTTG
GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAAC	GTATGGTTACGAACTTGTTCTTGCCAGAGT
GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAAC	TGGTGCTAAGAGCGTAAAGGACCTTAAGGT
GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAAC	AGATACTATAATAGAACTATATCAAGAATT
GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAAC	ATACAGGAGCAAGAATAGAACTATTAAGAA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	TTATTAGATTATCGCTTTGTAGTTGATGT
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	GGCTATGGAAAACGTAGACGCAAACGCTA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC

>NC_017860|1|1|194523-195607|CRISPRCasFinder
GTTGTTTGTGCCTTGCAAACAGCAGGCAGATGCAAC	AAAAATCAGTCCTTCCGCTATTGGAATGCT
GTTATTTTTACCTTGCAAACAGCAGGCAGATGCAAC	AGCTGAGTTTGAAGCTAAAATTCTCGCTGA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	TGTGTTCTAAAAGAGTACATTACCATAGG
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	TTTTATCTACTTTCACGTATTGTTAAGGA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	TTATTATCACACTGTTAAAGATTGGAGTGA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	AGAAACAAATATTGAGGAAAAATTAAAATC
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	GGTAAAGTGAACGAGCTCATTGCCAACAA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	TAGGTCAATTGTGCCACAAAACAAATAA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAAC	TTGTTCTTAGATGAGTTAACCACATGTAAT
GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAAC	CTTACTACTTTCATTGCTAACGTACTCTTG
GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAAC	GTATGGTTACGAACTTGTTCTTGCCAGAGT
GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAAC	TGGTGCTAAGAGCGTAAAGGACCTTAAGGT
GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAAC	AGATACTATAATAGAACTATATCAAGAATT
GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAAC	ATACAGGAGCAAGAATAGAACTATTAAGAA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	TTATTAGATTATCGCTTTGTAGTTGATGT
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	GGCTATGGAAAACGTAGACGCAAACGCTA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC

>NC_017860|1|1|194523-195602|CRT
GTTGTTTGTGCCTTGCAAACAGCAGGCAGAT	GCAACAAAAATCAGTCCTTCCGCTATTGGAATGCT
GTTATTTTTACCTTGCAAACAGCAGGCAGAT	GCAACAGCTGAGTTTGAAGCTAAAATTCTCGCTGA
GTTGTTTTTACCTTGCAAACAGCAGGCAGAT	GCAACTGTGTTCTAAAAGAGTACATTACCATAGG
GTTGTTTTTACCTTGCAAACAGCAGGCAGAT	GCAACTTTTATCTACTTTCACGTATTGTTAAGGA
GTTGTTTTTACCTTGCAAACAGCAGGCAGAT	GCAACTTATTATCACACTGTTAAAGATTGGAGTGA
GTTGTTTTTACCTTGCAAACAGCAGGCAGAT	GCAACAGAAACAAATATTGAGGAAAAATTAAAATC
GTTGTTTTTACCTTGCAAACAGCAGGCAGAT	GCAACGGTAAAGTGAACGAGCTCATTGCCAACAA
GTTGTTTTTACCTTGCAAACAGCAGGCAGAT	GCAACTAGGTCAATTGTGCCACAAAACAAATAA
GTTGTTTTTACCTTGCAAACAGCAGGCAGAT	ACAACTTGTTCTTAGATGAGTTAACCACATGTAAT
GTTGTTTTTACCTTGCAAACAGCAGGCAGAT	ACAACCTTACTACTTTCATTGCTAACGTACTCTTG
GTTGTTTTTACCTTGCAAACAGCAGGCAGAT	ACAACGTATGGTTACGAACTTGTTCTTGCCAGAGT
GTTGTTTTTACCTTGCAAACAGCAGGCAGAT	ACAACTGGTGCTAAGAGCGTAAAGGACCTTAAGGT
GTTGTTTTTACCTTGCAAACAGCAGGCAGAT	ACAACAGATACTATAATAGAACTATATCAAGAATT
GTTGTTTTTACCTTGCAAACAGCAGGCAGAT	ACAACATACAGGAGCAAGAATAGAACTATTAAGAA
GTTGTTTTTACCTTGCAAACAGCAGGCAGAT	GCAACTTATTAGATTATCGCTTTGTAGTTGATGT
GTTGTTTTTACCTTGCAAACAGCAGGCAGAT	GCAACGGCTATGGAAAACGTAGACGCAAACGCTA
GTTGTTTTTACCTTGCAAACAGCAGGCAGAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_017860.1\|WP_144439209.1\|190138_190384_+\|hypothetical-protein	unknown	unknown	unknown
NC_017860.1\|WP_014708451.1\|218403_219180_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|225973
NC_017860.1\|WP_014708432.1\|180262_181600_+\|hypothetical-protein	unknown	unknown	unknown
NC_017860.1\|WP_044047386.1\|211825_212707_+\|IS982-family-transposase	unknown	unknown	gnl\|CDD\|372648
NC_017860.1\|WP_014708436.1\|187821_189339_+\|DUF4301-family-protein	unknown	unknown	gnl\|CDD\|372920
NC_017860.1\|WP_014708443.1\|199919_200813_-\|DUF481-domain-containing-protein	unknown	unknown	unknown
NC_017860.1\|WP_014708435.1\|185470_187669_-\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NC_017860.1\|WP_044047487.1\|176413_176923_+\|hypothetical-protein	unknown	unknown	unknown
NC_017860.1\|WP_014708446.1\|208427_210167_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379050
NC_017860.1\|WP_014708450.1\|214436_217682_+\|DUF3883-domain-containing-protein	unknown	unknown	unknown
NC_017860.1\|WP_014708445.1\|207299_208415_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131694
NC_017860.1\|WP_044047383.1\|193857_194298_-\|hypothetical-protein	unknown	unknown	unknown
NC_017860.1\|WP_014708433.1\|182304_184593_-\|NADP-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|235976
NC_017860.1\|WP_044047384.1\|200989_201406_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274009
NC_017860.1\|WP_014708434.1\|184729_185347_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NC_017860.1\|WP_050955368.1\|177666_179700_+\|hypothetical-protein	unknown	unknown	unknown
NC_017860.1\|WP_050955369.1\|196241_199640_-\|hypothetical-protein	cas13b	cas13b_CAS_V-B1	gnl\|CDD\|380475
NC_017860.1\|WP_014708438.1\|190683_193704_+\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NC_017860.1\|WP_014710038.1\|210496_211714_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|372999
NC_017860.1\|WP_014708440.1\|195631_196237_-\|hypothetical-protein	Csx28	-	unknown

Protein	Function_ID	Function_description	E-value
NC_017860.1\|WP_014708438.1\|190683_193704_+\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	4.63876e-05
NC_017860.1\|WP_014708436.1\|187821_189339_+\|DUF4301-family-protein	gnl\|CDD\|372920	pfam14134, DUF4301, Domain of unknown function (DUF4301). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 505 and 516 amino acids in length.	0
NC_017860.1\|WP_014708435.1\|185470_187669_-\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NC_017860.1\|WP_044047384.1\|200989_201406_+\|hypothetical-protein	gnl\|CDD\|274009	TIGR02169, chromosome_segregation_protein_related_ptotein, chromosome segregation protein SMC, primarily archaeal type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.0014081
NC_017860.1\|WP_014708446.1\|208427_210167_-\|AAA-family-ATPase	gnl\|CDD\|379050	pfam13175, AAA_15, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	2.87716e-08
NC_017860.1\|WP_014708445.1\|207299_208415_-\|hypothetical-protein	gnl\|CDD\|131694	TIGR02646, Hypothetical_protein_SMc04429, TIGR02646 family protein. Members of this uncharacterized protein family are found exclusively in bacteria. Neighboring genes in various genomes are also uncharacterized or may annotated as similar to restriction system proteins. [Hypothetical proteins, Conserved].	0.0078533
NC_017860.1\|WP_014708433.1\|182304_184593_-\|NADP-dependent-malic-enzyme	gnl\|CDD\|235976	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed.	0
NC_017860.1\|WP_014708434.1\|184729_185347_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	9.17091e-12
NC_017860.1\|WP_014710038.1\|210496_211714_-\|IS4-family-transposase	gnl\|CDD\|372999	pfam14294, DUF4372, Domain of unknown function (DUF4372). This domain family is found in bacteria, and is approximately 80 amino acids in length. The family is found in association with pfam01609. There is a single completely conserved residue G that may be functionally important.	4.73101e-24
NC_017860.1\|WP_044047386.1\|211825_212707_+\|IS982-family-transposase	gnl\|CDD\|372648	pfam13612, DDE_Tnp_1_3, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contains three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	9.28324e-98
NC_017860.1\|WP_014708451.1\|218403_219180_-\|restriction-endonuclease	gnl\|CDD\|225973	COG3440, COG3440, Predicted restriction endonuclease [Defense mechanisms].	2.24583e-14
NC_017860.1\|WP_050955369.1\|196241_199640_-\|hypothetical-protein	gnl\|CDD\|380475	cd20477, Cas13b_Pb-like, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b from Prevotella buccae and similar Cas13b proteins. CRISPR-Cas (clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins) adaptive immune systems defend microbes against foreign nucleic acids via RNA-guided endonucleases. These systems are divided into two classes: class 1 systems utilize multiple Cas proteins and CRISPR RNA (crRNA) to form an effector complex while class 2 systems employ a large, single effector with crRNA to mediate interference. Class 2 type VI CRISPR-Cas13 systems use a single enzyme to target RNA using a programmable crRNA guide and are divided into four subtypes based on the identity of the Cas13 protein (Cas13a-d). The Cas13 proteins are capable of both pre-crRNA processing and target RNA cleavage, which protect the host from phage attacks. Once bound to a target RNA, their non-specific RNase activity is activated. Cas13b has many distinctive features compared to the other Cas13 proteins, including the lack of significant sequence similarity, disparate crRNA repeat region, and double-sided protospacer flanking sequence (PFS)-dependent target RNA cleavage.	0

>NC_017860.1|WP_044047383.1|193857_194298_-|hypothetical-protein
MECKIEIMVFLWNYLYKTGVVLRRGRCRGCGVGLDGSTMAALPIVRHWKGWLGLLHRLDAVARSVLLVSVDVQRRQESRCTEQDKMLSHIVIICFELVHCAESVLQRAANGRQPSIVPLCKDTHFQRVWGIGEGEIWAWGRWGRGL
>NC_017860.1|WP_014708438.1|190683_193704_+|T9SS-type-A-sorting-domain-containing-protein
MKKHYLMVLFLFFFCGMQADEVKVLEENTFSLAISPNGKYLVGYNPTKVKSGVGTESFLYDVGSGSLKWVTTDDPENWKKCGLFKDVNDAGTLCGSVKDLDHVIDFYGTSAPTNIAAILENGKVVKLPYGDLDMKKIKQHEDGTFAAALSNDGNVVVGYCKCSNFAFSYPCKWTRGANNEWKMEQLPLPESYKYGLAINVSSDGRTIVGLAIEGGRAIACYWIDGKCYTVNCKSEDAELAKMKQMRMIDMSPNGKYFIFSLSSRSDYRLFDVEKGTYRVLPTFERNETMRIPTVADNGDVFGAITYSTAGMGEVSYRSFWYQYSSDRIFDFTYYLYLFNPQLTIPFPLNYEDQAQAFPSAVSANGNVVTGNRDTNIAFGQIPKAWVLNVTKREVEIPATPNKPNGGSTGLHQIQLSWKIDKATYNSLTLKGYNVYCDGKKVAILKELQDEMTFALKDVYAGYRKFAIEAIYTDKQGKEMLSPRSNPTVIAVPDDYSFPLFENFEKGSLNTNYWTKSKDYGDDADTEWLVAAQVGHDASMGLSTGACTFKPYSSSVISRPLDATKINKVKCSFLILCNQEPAQGGGEVDLTKDTLSVEYTVDGGKSWSVAKEWTVKELPNLEGILTVDLTKHVAGKVFQVRFRKHGKGAVSYYFYLDNIMIGSGDNVDAPKGFTGKVMNNELFLMWKNSRNGYSLNYLSDPESPGYTLGNEGKELIGANKFMQSELAPYHGKYLTSVTSYINYYDDASGDKGIHAAVVVFEDGKLICEQEIENIKYNENTTQKLNQPIKIDSGKELIVGIKIHDYDAEQIPLTYESSKSSVTGKSDLYSEDNGKTWKTVRDFYEDDPQMGSCCWRITGNIADQPNDAVAEEDNTLIGYNVFRNGVQLNNVCIPFEVTRYIDKQPLDKAEYTVVAYYNDGRESFASTPYILDLTNGIAPLVNKSVLSVDKSAIRLNAEGTLRLYSVDGHFVAKSAKGIIPLGNISSGIYIVLVEYNNQRFTQKILINK
>NC_017860.1|WP_144439209.1|190138_190384_+|hypothetical-protein
MALRKRLFCAAKQPLLPCKTYAFATQNNRFCKTLIHSLLCKTFAYKISLHIFACFFLNSRIANVAVWLSLLLCKMFALWCV
>NC_017860.1|WP_014708436.1|187821_189339_+|DUF4301-family-protein
MLTKQDELLLNSKGITLSDFEKQLADFRNVFPFLKIESAATVGNGVVRLKENEVKEFTTAWDSYKAEKHKVVKFVPASGAASRMFKDLFAFLEAAYEVPTTDFEKFFFDNLKHFAFYNELNEKCRATHGKDIAQLVEAGNHKAIVATLLHADGLNYGQLPKGLLLFHKYAEGERTAMEEHLVEAAQYASCGAEAHVHFTVSHEHLELFKAKAVQKQPMYEENHRTHFSITFSEQKPSTDTVGANPDNTPFRNDDGSLLFRPGGHGALIQNLNDIDADVVFIKNIDNVTPDRLKPETVTWKKVIAGVLVTLQEKTFEYVRKLKAADYTPADLQCMKNFLENDLHCRRKDIDQLNNDELAAYLLEKFNRPMRVCGMVRNSGEPGGGPFYAYNADNTVSLQILESSQIDSNDAESVRMFKEGTHFNPVDLVCATKDYAGKPFDLPQFVDPATGFISSKSKNGKELKALELPGLWNGAMSNWNTVFVEVPAITFNPVKTVNDLLREQHQ
>NC_017860.1|WP_014708435.1|185470_187669_-|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MIFTDDELKSFHALTEELNEELANDVTEEDKEKLASYIKLMEEKGAMERNVFGLSELLCAMQTSLIAVRNIGLKRDSVLATVLYAGFENGALEIKQIETDFGRSVAQIIQGLARIQNLYKKNPIIESENFRNLLLSFAEDMRVILIMIADRVNLMRQIRDTDNKEAQRQVAEEANYLYAPLAHKLGLYQLKSELEDLSLKYLEHDAYYHIKEKLNETKKARDAYIKEFIEPVSKELQNAGLRFHIKGRTKSIHSIWQKMKKQKCAFEGIYDLFAIRIILDSPTQKEKMQCWQAYSIVTDMYQPNPKRLRDWISVPKSNGYECLHITVLGPNTKWVEVQIRTERMDEVAEHGLAAHWRYKGIQAEEGMDTWLASIRTALEAGDNLEVMTQFKRDLYDKEIYVFTPKGDLLKFPKGATLLDFAYHIHSKIGNQCVGGKINGKNASIRTELHSGDTVEVTTSATQKPKQEWLNIAKSARAKSKIRLALKETQVKEGVYAKEMLERRFKNKKIEIEEQTLFHLIKHLGFKEITEFYKQIADEKLDVNNVIETYQQLYNQTHNQNTQKETESAEKFELADETAELLKNNEDVLVIDQNLKGIDFSLSKCCNPIYGDPIFGFVTVNGGIKIHREDCPNAPELRKRFGYRVVKAKWSGKGGANYSITLRIIGHDDIGIVNNITNVLSKEEKVVMRSINIDSHDGLFSGNLVVLIEDTSKLNALIKKLKNIRGVKQITRL
>NC_017860.1|WP_014708434.1|184729_185347_+|TetR/AcrR-family-transcriptional-regulator
MVIENDYKKEVKAKILQLATTMFFQYGIRKVKMDDIAARLKISKRTLYEIYQNKEDLLYEVVVLNDKRGLEKLEEFDKPGVNVINIIIHVFKLQTEEFSRINPVFLEDIGKYPKLMEYIQNKRKRKRKQVVAFIERGISEGCFLPDINIEIMNTLADASGHYIMSNNLYNKYNIKEIFRTIVLLYIRGICTEKGIKLLDEEMKGF
>NC_017860.1|WP_014708433.1|182304_184593_-|NADP-dependent-malic-enzyme
MVKITKEAALEYHQNGRPGKIEVIPTKSYSTQTDLSLAYSPGVAYPCLEIQENPDNAYKYTDKGNLVAVITNGTAVLGLGNIGAMSGKPVMEGKGLLFKIYGGIDVFDIEIDETDPDKFCEAVEKIAPTFGGINLEDIKAPECFAIEERLKRTLDIPVMHDDQHGTAIISAAGLKNALEVAGKDIAKVQLVVNGAGAAAISCTKLYMALGLKKENILMLDSHGVITTDRPNLTEQKKLFATDRKDVHTLEEAMKGADVFVGLSKGNILSKEMIQSMNDNPIVFALANPVPEISYEDAMAARPDVLMSTGRSDYPNQINNVIGFPYIFRGALDVHAKAINEEMKLAAVHAIAELAKQPVPDIVNEVYHVNDLTFGQKYFIPKPVDPRLITVVSAAVAKAAIDSGVARRQIEDFEAYKDKLMQLLGQETKFTRYLHATAAQHPQRVVFAEGVHQNMLKAAVQAKQEGICQPILLGHPDRIKRVANRLKLDLTGIELIDMRADKEQGRRATYAKHLAEKRAREGYTFDEAYDKMYERNYFGMSMVENGDADAMITGLYTKYSDTIKMAKDVIGIRPEYKHFGTMHILNTKRGIYYIADTLINRMPNTETLVDITRLAHHSVKFFNDNPVMAMVSFSNFGSDEGGSPQQVREALVMTQEAHPDWLIDGEMQINFALDKKLRDEKYPFTRLKGKDVNTLIFPNLASANSAYKLLQGFSPETEVIGPIQMGLNKPIHFTDFECSVRDIVNITAVAAIDAYIEKIKNKQ
>NC_017860.1|WP_014708432.1|180262_181600_+|hypothetical-protein
MERDFLRKLAYRNGRNAKREVYKINKKDLLTLYKLWLIENKEVGEGSVPTYMSFIEVLDYYVFVDWQLDNSYEDDYLLQLVNAIRENQEAKANQIIKRLDDYLTELINQAKNSDTVSKFPHKYYSDLRSGWRKFSKYLLSGQSLSRITKEDTEQQIPSVINFKEWLIEEEGFTPDSASTYSSRVLNIQKMLFDKLKLENVITVVQGTAFKEPEVVETMMINLIDIVEEEVKDGLPITNWKENVAQSSLATIKKYRDFILFIASEYGTNRKWKEVIDQTIEQKDTDLNSVKQLVDKSFGAVKCVNHDKLFNIFSLRLRTQKRTSLPIKDIIRLLNSNKHDTICSNYSRRWFVDSLEKMLVYTSNDEKHLFKDVESISIREDKSVMVTIKNKGSKQLFTRTRSGEFAPMEAKDLSDISIEHQPAISKFLKDNDEELRILPLSKEKMN
>NC_017860.1|WP_050955368.1|177666_179700_+|hypothetical-protein
MMTNLLRNSYATLVALFIAMFALPTTAQAQIEYNLAVGGKVVTSDNCNDLSEIDGVSGTVNYEPKTKTLTLQDATIEGDIMYAISSDIYGLKIKVLGTNKINAQAYGIIFSRPTSIIGDGTLEIVASDESGINTSGNTLTVEGCTLNVKGGKFGIRGYDGNHGEDITVKNAKITAEGTSEGSIGNIASLAMEGCAIIEPVGAAFDESLHGVALNGALVKDKVVIAPASAPVTEYELIIAGTKVNDKNCNDLSEIEGVKGTVKYDPETKTLTLEDATINIEKENAIYSVIDGLTLKVVGNNTLKGTNTAIGFQKPMTITGGGTLDVESTKETAIYAVGTTLVIEDCTINAKGLDCGISGNDGENGEQLTIKNAKVTAEGKEGGSVCDFVTLTMEGCVITEPVGAAFNESLHGVALNGALVKDKVVIGPAPAPITEYELMIAGIKVNEKNCGNLSEIEGVDGTVKYDDETKTLTLENATINVGEKNAIFSVIDGLTIKVVGNNTLKGSEAAIVFSKPMAITGGGTLNVESTKQTAINAIGTALTIEDCTVNAKGLDCGISGNSGKDEEKLTVKKATVSAEGTNVGSICNLAMLTMEGCAITEPVGAEFDESLKGVALNGALVKGKVVITNGATAIGSLTTDTATVKQGIYTLSGVRLSVELNKLPKGVYIVNGKKVVKQ
>NC_017860.1|WP_044047487.1|176413_176923_+|hypothetical-protein
MKRILFTFLLLLIAILGKAQYGNYVQLTAVELLQYQLQKTRKQPATPPFRRYGLRRIRASKYLDDSDPRHIWGWHLQPNEQYEASEPLYKLFQKGDLSSLGIIDTQGAGIEVVFWDKTYYRRFSQQLRNIGFTLSNSPAATNVLQFRKPDTTVRVDVTIWPDLYILKIE
>NC_017860.1|WP_014708440.1|195631_196237_-|hypothetical-protein
MDCTLISKEVATALFSTISSLIPIVIAAYLTYRYAIKKLRKESFENIERAKYEAILKAHQSIYKLLRFITDTENDDCILVWEQPKGGGEKTYYFRQANIRKFIKELTEEIYNKGNGIFLSKKVMPLIFEYRSLVYGLLLTAKDKPDETIEIKNEKLAKRMIEIHQSLSIQIRKDINLKQRDLQLDNKKGKKWCWKRKKQNI
>NC_017860.1|WP_050955369.1|196241_199640_-|hypothetical-protein
MEDDKKTKESTNMLDNKHFWAAFLNLARHNVYITVNHINKVLELKNKKDQDIIIDNDQDILAIKTHWEKVNGDLNKTERLRELMTKHFPFLETAIYTKNKEDKEEVKQEKQAKAQSFDSLKHCLFLFLEKLQEARNYYSHYKYSESTKEPMLEKELLKKMYNIFDDNIQLVIKDYQHNKDINPDEDFKHLDRTEEEFNYYFTTNKKGNITASGLLFFVSLFLEKKDAIWMQQKLRGFKDNRESKKKMTHEVFCRSRMLLPKLRLESTQTQDWILLDMLNELIRCPKSLYERLQGEYRKKFNVPFDSADEDYDAEQEPFKNTLVRHQDRFPYFALRYFDYNEIFTNLRFQIDLGTYHFSIYKKLIGGQKEDRHLTHKLYGFERIQEFAKQNRTDEWKAIVKDFDTYETSEEPYISETAPHYHLENQKIGIRFRNDNDEIWPSLKTNGENNEKRKYKLDKQYQAEAFLSVHELLPMMFYYLLLKKEEPNNDKKNASIVEGFIKREIRDIYKLYDAFANGEINNIDDLEKYCEDKGIPKRHLPKQMVAILYDEHKDMAEEAKRKQKEMVKDTKKLLATLEKQTQGEIEDGGRNIRLLKSGEIARWLVNDMMRFQPVQKDNEGNPLNNSKANSTEYQMLQRSLALYNKEEKPTRYFRQVNLINSSNPHPFLKWTKWEECNNILSFYRSYLTKKIEFLNKLKPEDWEKNQYFLKLKEPKTNRETLVQGWKNGFNLPRGIFTEPIREWFKRHQNDSEEYEKVETLDRVGLVTKVIPLFFKKEDSKDKEEYLKKDAQKEINNCVQPFYGFPYNVGNIHKPDEKDFLPSEERKKLWGDKKYKFKGYKAKVKSKKLTDKEKEEYRSYLEFQSWNKFERELRLVRNQDIVTWLLCTELIDKLKVEGLNVEELKKLRLKDIDTDTAKQEKNNILNRVMPMQLPVTVYEIDDSHNIVKDRPLHTVYIEETKTKLLKQGNFKALVKDRRLNGLFSFVDTSSETELKSNPISKSLVEYELGEYQNARIETIKDMLLLEETLIEKYKTLPTDNFSDMLNGWLEGKDEADKARFQNDVKLLVAVRNAFSHNQYPMRNRIAFANINPFSLSSADTSEEKKLDIANQLKDKTHKIIKRIIEIEKPIETKE
>NC_017860.1|WP_014708443.1|199919_200813_-|DUF481-domain-containing-protein
MIKEKGLKHPNYDAKNGNMLFRLLALLFQRTHKKSACVKRCAYVLLCIVASLPAQAQMLFSENLTMSIDSAKTIQGSLQPVVDFKTEKENVLTLKNTANLNLLIKRNRVVNLINKLEFSTYGKKITVSGGYVHAEYRYLLQHAFEVYPYVESQWAGSRGMTFKVSTGLQSRYRLVNTEHSLMFAAIGLFYEFEKWEYPDPPAGTTPHAYSRSVKSHLSLSYRHSLGEHWEITATAIHQAKPNSYFKSARFGGAVDLAYRITPKIGVRGTYRIIYDTAPIVPIRKNYTAVDAGLDISF
>NC_017860.1|WP_044047384.1|200989_201406_+|hypothetical-protein
MKRLFLIGIMALAAVSGFAQDVNRVDKLKEQQKVLDLTSKLNKLQLDLEKEKATYNDLVNKASEVNAEANVVTAEFNSSDAKSTVKDAKETIKVLKEVKAVNKKLKKAQKKTSKIERKIAKLQARIDDLNKRIKFVDQ
>NC_017860.1|WP_014708445.1|207299_208415_-|hypothetical-protein
MWYLEKPSEKDLNAYKALFYDKIQKKIEKKIEKDSCFKILLEEENIERLLISEPKELYELNNKLMTEFIKDYSVDELKEYQKTKENKKKDEKDTYLINKYDKLKEIQTIFNYNTLVSINQKKSYKIAEIKGRNTCTYCNRQYTITIEEDGKFITRPQFDHWLPKSVFPLLSLSFYNLIPSCSICNSSAKGEQIFSFEELIHPYKRSSPETDFRFSYLPNGKGGWKIDLYNLKGIEKETFKAFKLKNIYNYHYKLEAKDLLDLAIKNNGTYIEWLLNDMKEKKIAPSYEEAYRLLFGTEYDIKKVLDRPFSKLKRDLLITISKLNPNIAILESLKKGERKISFSFAFYVETLYQYLKRTLHIASYRLSLKPI
>NC_017860.1|WP_014708446.1|208427_210167_-|AAA-family-ATPase
MDGELWYLVDNKAVRLVVNGRKVNLFSYTKDTQEEKFCNEPLLLSNEKTDKDSPMENLNPEKLKEFIPSLFYTLVSNYSIYAYNAVDYLDENNSIELESEIRGEVTNAKYECNWLSGIFHKNDGYQSPIVLTPYRKEGNININTEKQLSNERLISLLLMDNKYYRTINGHLKVTDLKITKNEENKDENTLKEEKLYNFTNEIFNRNKEIIIDSWYKTLNISQKDIQESSYTKEILTYIAYKTLKIAGKYKQYNNIIDVENLQQTDGVLDNTQIKKLISTMHDDTSHITKKIRQCFLYLLYNPFKLKSEGESIIKIDEAEKRVKKGLTNSDSLRNNPFFKNISIEDLLPPPIFSIEIILKDKLNSDNVPFNTLSSGERQQAFSISSALYHLANIESVHNDKNNVRVCYSNALIIFEEVELYFHPQLQKQLIKNLLDGIKQMHFKHIKSIQIIFVTHSPFILSDIPTENILALKKDCTETKELKTFSANIYDILNTSFFMEEGAIGDYAQWIIQFIVKCFEDRQSIPPEDLLELISLIDEPLYHKVLIQKFYEKYPNQTPLSKKIEELEMQLDALKKQQNK
>NC_017860.1|WP_014710038.1|210496_211714_-|IS4-family-transposase
MGKSTHFIGQPVYNQVIKLLDKQQIKQISLETHRSEAYVKRLDGWTHLVIMLFGVLKHFDSLREVEIGMKAEVNKLHHLGIDYVVRRSTLADANKRRPQEFFAKVYAYLLERYGSFLSDSRSKGEQNTWEKLLYMMDSTTITLFDNILKGVGRHPKSGKKKGGMKVHTVMKYHVGVPMVVRLTSAATHDHYLLKEVHLPKDATLTMDRAYVDYAQFQRLTEEGVCYVTKMKKNLTYTELSSVTYVSPDGLVTHTDKKIVFEKGAIRHQARRVELWSDNSHKSVVLLTNNFELDVKDLEEIYKRRWAIESLYKQLKQNFPLYFFYGDSVNAIQIQTWVVLIANLLCTVISRMIKRHVSFSQLVTMLRLTLMYYTDFISFMENPQNDELIIMAEKANAPPKELDLFD
>NC_017860.1|WP_044047386.1|211825_212707_+|IS982-family-transposase
MEIFCIFDDFCKYFTPELKKHTLQVPGKRHRNRASRMSDSEIMTILVLFHTHRFRDLKSFHLGYICQHMRGDFPHRISYNRFVERQAQVALHLLLFLQTCALGKCSGMSIIDSTPLASCHIKRERQHRTMRGWAAKGKCTMGWFYGFKLHLVINDKGEIIQWKLTPGNVDDRQPLKDKRLTERLFGKLFADRGDISQNLFEMLFVDNIHLVTKIKKNMKNSLMSLYDKLLLRKRSVIETVNDELKNVCQIEHTRHRSFDNFATNLIAGLIAYNLLPKKPEMNIEIIDKSRIIA
>NC_017860.1|WP_014708450.1|214436_217682_+|DUF3883-domain-containing-protein
MIEENLSPEELWQRNEKKRLEYENYCNKIIQGLEGLDENSGERALWELIQNARDQRLNEDADVIIKIELTETELIFSHHGKAFDYTSFRALVKQDSSKDRNGAKQVGKYGTGFMTTHAFNRLVHITAPYIVKRGKDDISGYFQIVDFHLDRTMVDTDEGPSKMEEQLDLVEDFCNQKLLESISNNITSFRYELTKEQIGQVSTQLSNAISLLPFVMVINSNITKVEVSDHHSNKRYVYTKKTDQKPKLLENNAWKEHTDIVYLDDACQVSSYRCKSLRSEKGDVIIIPPFPPSCGSTEIIPSLFLWFPLLGTEKFGVNFIFHSERFHPVEKRNNIMLPGSIGIKQEKGGLNREVLVEMMNMLFDYYSNPENTKMLSRSMCEVAFPAVNDDEETQRFYQDMQALWVAKVPYWKAIPVGKQFVSISDARVKLLHPDFFKRLTDEQKTEYEQTLASYALLPKNSDGNSYLMPSEDLIAWSETVNRWGCNRDGEFFITVKDVCESIKTKSEDLYKFLKLMNDSGNETVMETYALLPNRMGELRTKQTLYYGDFMSDRVYILVSGVMGDEAKKIYDKSFLDITSVNPYSKADLQKDITANIGSLRKQTLANTENRELTDEELTALINFCSASYLDAFNNQRGRIMPIICQFYNIPFSKIPTDKFRDEEEEEFYKTTMNFLLDYTLKQISQKNSTWVNDNKSWLLNFLTEYSPEKNEDRKKKLNDYGVLPNQNNELCLISNLRKNAGSEELVDIYRTIFDKDLKNDWIDSNFESIVTLTEDKPEDIANKIEKRLVEDMRQENISERKFQKVVREIILKINKDKKWESWFGQINDKKATYTFSMKSGESQEHLFALMDLSDNDLGRLATLKNKVNMSELLDKMERIKELEDERKSKFNFCFRIGKYIETEIRCALSDKLVSVVTRKSIEDSLTVDDIQNGQDIIVRVKHGCEEKDVYFIEVKAKWNFDMDNYAHMSTNQLKMAATHPDCYALCCVDLTDREKINLPPNSNEDYVKEHIQDIIANTRVLLNVGDELSEIMTPILAAEKDITELKMRIGEYRSNITKRAFQSGKPFEELVKEILNKIKLL
>NC_017860.1|WP_014708451.1|218403_219180_-|restriction-endonuclease
MASIKKWSREEMILALNLYLKIPFGKMHSRNSAIIDLAKLIGRSSNSVALRLVNYAACDPILHSRGIKGMSGGRQRCLPYWNEFINDRDKLIFESEQILAKYENVSIESKYKDILFDIPTELKGETRLQEVKTRINQSVFRELVLANYNRKCAITGIDIPELLVASHIVPWAENHKERLNPGNGICLSMLWDKAFDRGLISIMPDYTIVFSEHIRNCSDKEFYKSNFANIEGTKIHLPNKYLPNQEFLEWHYNNIFLH

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Crispr_ID: NC_017860_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017860_2

367523-367613

Orphan

Consensus_repeat	Method
TACCTTTGCATAAGATATAGCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_017860_2

>merge|NC_017860|2|367523-367613|CRISPRCasFinder
TACCTTTGCATAAGATATAGCTGCGCTCGGCAAATTGAAAGTAAACTTTCTTTGCACTCGTTGGCAATACCTTTGCATAAGATATAGCTGC

>NC_017860|2|2|367523-367613|CRISPRCasFinder
TACCTTTGCATAAGATATAGCTGC	GCTCGGCAAATTGAAAGTAAACTTTCTTTGCACTCGTTGGCAA
TACCTTTGCATAAGATATAGCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_017860.1\|WP_044047509.1\|366790_367219_-\|hypothetical-protein	unknown	unknown	unknown
NC_017860.1\|WP_014708577.1\|370719_371649_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|214488
NC_017860.1\|WP_014708571.1\|361982_363026_+\|exopolyphosphatase	unknown	unknown	gnl\|CDD\|223691
NC_017860.1\|WP_044047424.1\|383873_384449_+\|hypothetical-protein	unknown	unknown	unknown
NC_017860.1\|WP_044047415.1\|365489_366698_+\|L-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|273233
NC_017860.1\|WP_014708570.1\|360994_361906_+\|nucleotidyltransferase	unknown	unknown	gnl\|CDD\|133024
NC_017860.1\|WP_014708576.1\|368399_370175_+\|30S-ribosomal-protein-S1	unknown	unknown	gnl\|CDD\|235775
NC_017860.1\|WP_014708564.1\|353938_354409_+\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	unknown	unknown	gnl\|CDD\|376840
NC_017860.1\|WP_044047420.1\|380727_383001_-\|BamA/TamA-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|227116
NC_017860.1\|WP_014708582.1\|376273_377173_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270229
NC_017860.1\|WP_014708572.1\|363181_365221_+\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NC_017860.1\|WP_014708565.1\|354916_357691_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|224037
NC_017860.1\|WP_014708566.1\|357938_358418_-\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|376590
NC_017860.1\|WP_014708586.1\|379801_380605_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293819
NC_017860.1\|WP_014708568.1\|358960_360121_-\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	gnl\|CDD\|376444
NC_017860.1\|WP_014708567.1\|358410_358920_-\|DMP19-family-protein	unknown	unknown	gnl\|CDD\|379547
NC_017860.1\|WP_014708581.1\|374827_376207_-\|DNA-repair-protein-RadA	unknown	unknown	gnl\|CDD\|236994
NC_017860.1\|WP_014708584.1\|377262_379425_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NC_017860.1\|WP_044047422.1\|383085_383838_+\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|349982
NC_017860.1\|WP_014710207.1\|372988_374206_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|372999

Protein	Function_ID	Function_description	E-value
NC_017860.1\|WP_014708577.1\|370719_371649_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|214488	smart00047, LYZ2, Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.	2.56014e-40
NC_017860.1\|WP_044047420.1\|380727_383001_-\|BamA/TamA-family-outer-membrane-protein	gnl\|CDD\|227116	COG4775, COG4775, Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane].	7.4538e-18
NC_017860.1\|WP_014708571.1\|361982_363026_+\|exopolyphosphatase	gnl\|CDD\|223691	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only].	3.68771e-40
NC_017860.1\|WP_044047415.1\|365489_366698_+\|L-serine-ammonia-lyase	gnl\|CDD\|273233	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form. This enzyme is also called serine deaminase and L-serine dehydratase 1. L-serine ammonia-lyase converts serine into pyruvate in the gluconeogenesis pathway from serine. This enzyme is comprised of a single chain in Escherichia coli, Mycobacterium tuberculosis, and several other species, but has separate alpha and beta chains in Bacillus subtilis and related species. The beta and alpha chains are homologous to the N-terminal and C-terminal regions, respectively, but are rather deeply branched in a UPGMA tree. This enzyme requires iron and dithiothreitol for activation in vitro, and is a predicted 4Fe-4S protein. Escherichia coli Pseudomonas aeruginosa have two copies of this protein. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	1.09525e-138
NC_017860.1\|WP_014708570.1\|360994_361906_+\|nucleotidyltransferase	gnl\|CDD\|133024	cd04181, NTP_transferase, NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.	5.77527e-10
NC_017860.1\|WP_014708576.1\|368399_370175_+\|30S-ribosomal-protein-S1	gnl\|CDD\|235775	PRK06299, rpsA, 30S ribosomal protein S1; Reviewed.	0
NC_017860.1\|WP_014708564.1\|353938_354409_+\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	gnl\|CDD\|376840	pfam02590, SPOUT_MTase, Predicted SPOUT methyltransferase. This family of proteins are predicted to be SPOUT methyltransferases.	2.18597e-75
NC_017860.1\|WP_014708582.1\|376273_377173_+\|hypothetical-protein	gnl\|CDD\|270229	cd01008, PBP2_NrtA_SsuA_CpmA_like, Substrate binding domain of ABC-type nitrate/sulfonate/bicarbonate transporters, a member of the type 2 periplasmic binding fold superfamily. This family represents the periplasmic binding proteins involved in nitrate, alkanesulfonate, and bicarbonate transport. These domains are found in eubacterial perisplamic-binding proteins that serve as initial receptors in the ABC transport of bicarbonate, nitrate, taurine, or a wide range of aliphatic sulfonates. Other closest homologs involved in thiamine (vitamin B1) biosynthetic pathway and desulfurization (DszB) are also included in this family. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. These binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.0132e-08
NC_017860.1\|WP_014708572.1\|363181_365221_+\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NC_017860.1\|WP_014708565.1\|354916_357691_-\|AAA-family-ATPase	gnl\|CDD\|224037	COG1112, COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair].	6.10613e-38
NC_017860.1\|WP_014708566.1\|357938_358418_-\|SsrA-binding-protein-SmpB	gnl\|CDD\|376590	pfam01668, SmpB, SmpB protein.	6.75709e-80
NC_017860.1\|WP_014708586.1\|379801_380605_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293819	cd07733, YycJ-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YycJ and related proteins; MBL-fold metallo hydrolase domain. Includes the uncharacterized Bacillus subtilis YycJ protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	2.5841e-42
NC_017860.1\|WP_014708568.1\|358960_360121_-\|RepB-family-plasmid-replication-initiator-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	1.87044e-14
NC_017860.1\|WP_014708567.1\|358410_358920_-\|DMP19-family-protein	gnl\|CDD\|379547	pfam14300, DUF4375, Domain of unknown function (DUF4375). This family of proteins is found in bacteria. Proteins in this family are typically between 156 and 204 amino acids in length. There is a single completely conserved residue G that may be functionally important.	4.04823e-46
NC_017860.1\|WP_014708581.1\|374827_376207_-\|DNA-repair-protein-RadA	gnl\|CDD\|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
NC_017860.1\|WP_014708584.1\|377262_379425_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	0.000286433
NC_017860.1\|WP_044047422.1\|383085_383838_+\|RNA-methyltransferase	gnl\|CDD\|349982	cd18109, SpoU-like_RNA-MTase, SAM-dependent RNA methylase related to SpoU-TrmH. RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	2.54933e-79
NC_017860.1\|WP_014710207.1\|372988_374206_-\|IS4-family-transposase	gnl\|CDD\|372999	pfam14294, DUF4372, Domain of unknown function (DUF4372). This domain family is found in bacteria, and is approximately 80 amino acids in length. The family is found in association with pfam01609. There is a single completely conserved residue G that may be functionally important.	6.21893e-23

>NC_017860.1|WP_044047509.1|366790_367219_-|hypothetical-protein
MRILRVLIVGFLMILAAGSASAETAIGIGNFDWRPVMDAIMHVESKGNAKAVNGPHAGILQISKGIVTECNSILKSKGSTKRYTLADRFSPNKSREMFVLFQSRHNVSNNIERAIRMWHGGVNFSKSKTQQYYNRVKKFLKI
>NC_017860.1|WP_044047415.1|365489_366698_+|L-serine-ammonia-lyase
MKSLKEIFRIGKGPSSSHTMGPAHAAEIFARRNPNAKAFEVTLYGSLAATGKGHLTDVAITEVLSEIAPVEIVWQAKTVLPYHTNGMRYKAFDAEKQVIDEWVVYSVGGGALSEGKGKDDMFYTTPVYQLSNMKEIQEWCEKNGRDFWEYVDHCEGAEIWEYLHEVWTTMCHAVEEGLENDGVLPGPLNLSRKAGKYYIKAQSYKTSLQSRGLVYAYALAVSEENAAGGTIVTAPTCGSCGVMPAVLYHLYKAHQFSERKILRALATAGLFGNVVKENASISGAEVGCQGEVGVACAMASAAACQLFGGTPSQIEYAAEMGLEHHLGMTCDPVCGLVQIPCIERNAFAACRALDAQLYANFSDGRHHISFDKVVRVMKQTGHDLPSLYKETSEGGLAHNFEW
>NC_017860.1|WP_014708572.1|363181_365221_+|transcription-termination-factor-Rho
MFSKEELLEKDIPELESIAKDLEAEYKKTDDKESIIYAILDRQAMNAGASHPLGTTKRKRTRIAKKDPDKVYTVHGKEGENFDLQKNKPQGVPQQSLFKDMPDEQPVVKEEAAPVTEEEAPKKRGRKKKEETEETVATVVAEAPEAEIPKRKRTTQKATEEPEQTETAAEVQAEAPIETEVAAPVEAETPAEDNAEAIIPEAEFTPNTENTAEGETTTNLIEQLQAKVNAHNEQNEEAANFAADGIWAGDPGDGTDFITVVDIPIEDQGIVPTYDMFDRPTISNDANQPSFYPEMGMQQAAVPAYDFTDIIKANGVLEVMPDGYGFLRSSDYNYLSSPDDVYVPANQIKQNGLKTGDVVECQVRPPREGEKYFPLTTINKINGRVPAEVRDRVSFEHLTPLFPDEKFTLCGDPRTTNLSTRVVDLFSPIGKGQRALIVAQPKTGKTILMKDIANAIAANHPEAYLMMLLIDERPEEVTDMARTVNAEVIASTFDEPAERHVKIAGIVLEKAKRMVECGHDVVIFLDSITRLARAYNTVAPASGKVLTGGVDANALQKPKRFFGAARNIEGGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRSLSNKRIFPSVNLVASSTRRDDLLQDKTTIDRMWILRKYIADMNPIEAMNSIHDRMLRTQDNNEFLLSMNG
>NC_017860.1|WP_014708571.1|361982_363026_+|exopolyphosphatase
MNVNLLSDTEAEQLRQLIAEAEHIVICAHKSPDGDAIGSSLAWKSYLKQIGKTDITVCMPDAYPDFLQWLPEANTILRYDKHPDRVQQVFDNADLVCCMDFNQYTRVEDMRPTLEGCKAKRILIDHHLEPETNNAITVSNPNMSSTSEMVFYIISQLGGYNGMTKECAQCIYCGMMTDTGGFTYNSTRPEIYFVIGQLLSKGIDKDNIYNRVYHNYSVNALRLRGHIIANKMKVVNELHAAYFTVTKEEMRRFHFIKGDLEGVVNIPQQIKGLKLSISLREDTERPNLVLVSLRSGNGFHCQPMAVQFFNGGGHADASGGKLHCSIEEAEQITLKAILAYQDELKKK
>NC_017860.1|WP_014708570.1|360994_361906_+|nucleotidyltransferase
MKPTLLLLAAGMGSRYGGLKQLDGLGPNGETIMDYSIYDAIKAGFGKIVFIIRKDFEEQFRKQVLAKYEGHIPAEIVFQSIDALPEGFCVPEGREKPWGTNHAVLMAKDVVHEPFCVINCDDFYNRDAFMVIGKFLADLPEGSRNKYAMVGFRLGNTLSENGTVSRGLCSTNEKGHLTTVVERTKIERHGDKVQYMEEDGSWTTVPDNTPTSMNVWGFTPDYLEYSDADFREFLSDPKNIENKKSEYYIPMMVNKLITNGTATVDVLDTTSTWFGVTHNADRDGAVARIKQLVADGVYPEKLF
>NC_017860.1|WP_014708568.1|358960_360121_-|RepB-family-plasmid-replication-initiator-protein
MVTTKKTVTKKTTAATSKPKKGAKAQKAPVKRGISNELIPIEEETWLLQPIAVTMMRHDYSLIQVRILVSIVESLQSILHGILNNKRSPQLDLFKTNELDEDGRMPIKLPFKELGVDPNHYPQLRTSLKMLAAIPVEIPYKTSEGRKYTKATNLCDVYIPEDRSYNKYAILKLDQSVAERLVSLDFGYHRLGKQIVFACKNRYTQRIYMFIESWVDKGRTVIKTLEFRKMLRLENNYKKFSDFCRRVLDPAKQELQELADKGFCDCYFDYEKKYDHGQRGGEPDELVFQIYRAKNKMDAQLEQMNEMQRRQFQQMLIQYFDFTQPNAKDMAERITAELYPLAMQKLMDLRQRFNTTYVKDKAAYTFKSLDQMIKEHEVPNTTVEEV
>NC_017860.1|WP_014708567.1|358410_358920_-|DMP19-family-protein
MIEVKIKDATLRAAVAEGEDAFVQAFIDAISAAIGGTLTQDNMQELTPDQITLLGWGYLHEEVMDGGYVQLIHNGYGAFIFKNPFGVAMRNWGLTELYSHLRRTKKAYDKYREQIEKDLSDDDFMALYEQMPEFDDADDDFIVNEEQWTKMVAAYIDDHINDFVVIENE
>NC_017860.1|WP_014708566.1|357938_358418_-|SsrA-binding-protein-SmpB
MNKEEQEIRKKSPVQIRNKKASFEYYFIDTYTAGIVLTGTEIKSIRAGKASLVDSFCFINKGEIWLEGMNISPYFYGSFANHEARRKRKLLLNKREIRRLEEDSKSPGYTIVPTLVFIDQHGRAKVDIALCRGKKEYDKRQTLKEKEDRREMDRAMKRY
>NC_017860.1|WP_014708565.1|354916_357691_-|AAA-family-ATPase
MDGRKYMIVDLEDSDKKKFKTEQVKSIKKTTEGYWRVSFLSSPDSYFTYNPARLIFLTDPEMIELDGKGVYVKNKHITNLKELLRFSNGRYTFYRLIYTNGEICYSAEKNVYITRTPIDKIGGSTWEYLQKLVDETGLLNKDTGENILSKRYNLIDLNRDNVPLAQYLGDRTKLRTYRLPNYIYYPFGCNASQKAAVEVALTHQVSIIQGPPGTGKTQTILNIIANLLMSKKTVLVVSNNNSAVENIAEKLKCADLGFLVAKLGNSENKATFVKQKVKDYPNDMATWVIDKNMAMEQVEKSLVAVSMGFEGETKLVELKAEQDALMTEKQHIDMLKDTFSKDYEWLNSKPSAKLMTLLNLCQIMVEHEQEPNFWFRLRWSFILGLPLFSFLKGNLPQVIKCLEYAYYHTRLSEIDQRMADINKILETIDIKQSIKELKETSFQILKSEIAQRCSNEKRPFFNIVDIKTQSENFLKEYPIVLSSTYSANNCIDKNMVFDYVIMDEASQVDIKTGVLSLSCAMNIVIVGDDKQLPNVVSEKDKKAFNAIQSLYNVDECYNGLTHNFLQSCTEIFKDAPTTLLREHYRCHPKIIEFCNQRFYDGELLAMTKDSGEDKVLKVVRTAKGNHARKEETKSNNGEPITIHFNQREIDVIKDLMTEYGNNDSVGIITPYVGQAKKINKALNKDIASTVHKYQGRECDTIIISTVDDTPTSFSDDARLLNVAISRAKSHLCIITTGNKIEEDTNLYQLIAYVQHNNCEVEKSKLHSVFDLLYKQYTAERLAYQKEHLPVSDYLSENLIYDILIEALKELELNNLSVLCHYPLSKLISEWTLLNEQQRAFAESPLAHVDFLVYSSLTKRPLLTIEVDGWHFHKNNEVQAFRDNLKDEILDKYGLAPHRISTIDIVTMETMKEMLEYKLHIKKQG
>NC_017860.1|WP_014708564.1|353938_354409_+|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH
MKATLILVGKTTEDVFVRAIADYTGRIAHYLPFNIVTLPELKNTKKLSEAQQKDREGEMILKEIQMSDTVVLLDEHGKEFRSVEYAAWLQKKQNTAKRLVFVIGGPYGFSKAVYDRANEKISLSKMTFSHQMVRLIFVEQLYRACSIIKGEPYHHE
>NC_017860.1|WP_014708576.1|368399_370175_+|30S-ribosomal-protein-S1
MANFENVNPLSDFNWDDFENGVTVGGDKEELTKAYDNTLNKIQEHQVVEGEVISIDKKEVVVNIGYKSDGIIPASEFRYNPELKVGDKVEVYVENQEDKSGQLILSHKKARLQKSWVNINEALEADAVIQGYIKSRTKGGMIVDVFGIEAFLPGSQIDVHPIRDYDVFVGKTMEFKVVKINQEFRNVVVSHKALIEAELEAQRKEIISHLEKGQILEGVVKNITSYGVFVDLGGVDGLIHITDLSWGRINDPHEVVELDQKINVVILDFDEEKKRIALGLKQLAPHPWDALDPNLKVGDHVKGKVVVMADYGAFVEIQPGVEGLIHVSEMSWSQHLRSAQEFMKAGDEVEAVVLTLDRDERKMSLGIKQLKEDPWEAIEAKYPVGSKHVAKVRNFTNFGIFVELEEGVDGLIHISDLSWTKKVKHPSEFTQVGADMDVIVLEIDKENRRLSLGHKQLETNPWDTYESIYTPGSTHVGKITESMDKGAVITLNEGGEGFATPKHLVKEDGSQAQLGEELPFVVIEFVKDTKRIILSHSRTFEEVKEEQARRQRTASKKHSEPASQINNVAAGTSLGDLDVLADLKKKMEEGK
>NC_017860.1|WP_014708577.1|370719_371649_+|LysM-peptidoglycan-binding-domain-containing-protein
MKRYILIIIVALASIGSAIAGPKIRWNQAYQNYFNKYKNIAIREMQRYGIPASITLAQGVLESGAGNSRLATVANNHFGIKCHDWTGPSISHDDDELGECFRVYNNAVESYEDHSKFLRGRKRYSNLFLLSKTDYRGWAHGLKRAGYATNPVYAYSLIDIIELYRLYEYDNMVLRKGNNDWDTPTQPQQNSSYADMRQFRAFNENCYLTAHAGETYDNIAREIGISAHKLAKYNERPEDAPLNEGEIVWLRKKQRHVPENFGKQYHTVRSNESLYDISQQYGVRLKNIMKANRKIVKRGIKAGDRVVLP
>NC_017860.1|WP_014710207.1|372988_374206_-|IS4-family-transposase
MGKSTHFIGQPVYNQVIKLLDKQQIKQISLETPRSEAYVKRLDGWTHLVIMLFGVLKHFDSLREVEIGMKAEVNKLHHLGIDYVVRRSTLADANKRRPQEFFAKVYAYLLERYGSFLSDSRSKGEQNTWEKLLYMMDSTTITLFDNILKGVGRHPKSGKKKGGMKVHTVMKYHVGVPMVVRLTSAATHDHYLLKEVHLPKDATLTMDRAYVDYAQFQRLTEEGVCYVTKMKKNLTYTELSSVTYVSPDGLVTHTDKKIVFEKGAIRHQARRVELWSDNSHKSVVLLTNNFELDVKDLEEIYKRRWAIESLYKQLKQNFPLYFFYGDSVNAIQIQTWVVLIANLLCTVISRMIKRHVSFSQLVTMLRLTLMYYTDFISFMENPQNDELIIMAEKANAPPKELDLFD
>NC_017860.1|WP_014708581.1|374827_376207_-|DNA-repair-protein-RadA
MTKDKTAYVCDNCGQESAKWIGKCPNCGQWNTFKQIRIAPNTGLSTGEKLVAHTFGAPKRNVPQALNAVSSTEEIRIDMKDSELNRVLGGGLVAGSMVLIGGEPGIGKSTLTLQTLLATDRKVLYVSGEESPQQIKMRALRISETIPDNIVILSETSVEKIFSCIKDVKPELLVVDSIQTVATETVASSAGSITQIRESAAALLQLAKSSDIPVILIGHINKEGSIAGPKVLEHIVDTVLQFEGDQHYMYRILRSIKNRFGSTSELGIYEMRQNGLRPVSNPSELLLTDTPDDLSGVAISSAIEGVRPFLVETQALVSSAAYGTPQRSATGFDQRRLNMLLAVLEKRVGFKLMQKDVFLNIAGGLRITDMAMDLSVIAAVLSSNVDTPIEAGWCMAGEVGLSGEVRPVSRIEQRIAEAEKLGFSHIIIPKNNAQGLKGRYKIATHPVAKVEEALRLLFG
>NC_017860.1|WP_014708582.1|376273_377173_+|hypothetical-protein
MERIKYLLLFAAITLVGCQVSDEEDSLIGKRKNKVEEVAYARAFKVGVTPTMDCLPIFLLKDSNLYNPDNIDIRLKEYSSQLNCDTAMQNGRVQASVTDLIRAEYLKEEKHIVLDYMTETNATWQLLASPQSGVKKPEDLGNKIIGLTFNSIMQYLTIRVFSGHDISSRFYGSQINDIFIRLKMLNNNQIDAIWASEPQTTQAKLLGNREIYSSVNENFIPGAIVYVNNPKIEHQRAFEAAYNKAVDILNSHSIQYFAPLIKKYMKVDDKVVAALPKITYKRVIAPRERAINKARNILP
>NC_017860.1|WP_014708584.1|377262_379425_+|hypothetical-protein
MNVEMNIGTAFEHLSAKQLDEAIKVLQPIYDGKPSLVDYDKFIAIANDYDLMCDYMLRGFKDPARKGLYKSLLERLYKVTANLLLSWNCKNKPTFVDAFRTADQLNLSHNFVRSVLENFVSDIAMLSLAPEAERKNKETELYERHQTFIERLFNALLVSRQWSESDAKFYTDLLTSPTIDASDQMLIVSAITLSAMTIYDVKKFSTLVNVYRHAQEEKVRQRALVGCVLSLTDNPLFVKEQASLMDELIASEDMKRELLNLQKQMFNCMDAERDNDKIQRDIMPNIMKNSDLQFNRFGITEKENDALENILHPDADEHKMEMMEESIQKMMKMQQQGSDIYFGGFSKMKRFPFFDHIANWFMPFSAHHPGLKEVAQKLGDSSFLDKMTEQGLFCESDKYSLALTMAQIINQLPANILEVIKSGDGIGLPVSEPTDYTPDFLRRLYIQDLYRFFEVKLAFNKDIANPFKKSGSYKAFFMMHDLFVKESYIEPKMSLSMFLHKHKHEADLDEILETFYSETATYQVFRGLKSEREGDESEALGHFLAAIGIEQDNTWVLKTAGVFALKRKDYGLGLHCYGKLCELLPDVKPYAINYCLCLIATGDTKTALNKAYELDLSDETDNRVKRLLAWALICNGNGKKALHIYNALTETDPLPDDALNIAYAHWVNGNPSEAKNYLVQWKINHPDAKLEEEFDNDYYMFEQNGITDVDRILMLSALKV
>NC_017860.1|WP_014708586.1|379801_380605_-|MBL-fold-metallo-hydrolase
MLKFISFGSGSSGNAYFLYTETDGIFIDCGIGLRTIKKYMHSYGLHLSMIHNILITHDHADHVKSVGSMSDNQSIPVYATKKVHEGIVNNWCVRKKVVAEQVRYVEKGRTEQIGEFTVTPFEVPHDSTDCVGYCIECQGLTFTLVTDCGHITDEIRTFVSRANYLVIEANHEPEKLAAGPYPQYLKTRITSKTGHLSNAECAQTIVENATLGLRHVWLCHLSDENNHPELARKAVTSEMASHGLVADVDFMVEVLRRKTPSGIYELK
>NC_017860.1|WP_044047420.1|380727_383001_-|BamA/TamA-family-outer-membrane-protein
MFRIKGFHTYFLLFFATLALLLSSCSTDKFVADGSYLLDKVELCSDEADFNATQLAQYVRQKENSRWFSFFKIPLGTYSLAGRDTTKWINRTLQRIGEKPVYYDTLQARLSCEDLRVAMNNMGYMNARVVFNTKVRGKKLKAIYTLLPGKPFMIDRFSYDIQDSIIADILKSNLSQGLDATHPRQFTVLALDNERKRITKILNDQGYYRFNKDYIYYTADTVRGSRAVDVTLHLTKYQPSSASEPALHPRYIVGRVNVLPGDSTGLHIRREIIADNTLIEPGKYFSATDLQTTYNNLARLGAIRYTDIEFKEMQRVDSIIVGKMLGYQQSEKRYLEANIKLSSNKPNTISFQPEGTNTAGDLGAAAVLTYQNRNLFHGSELFSIELRAAFEAIKGLEGYNNHNYEEYGVQARLQFPRFLSPFSTREFRRRSNAVSELSVSWDLQDRPEFHRRVFSAAWKYNWSNARRHLRYELEVPDLSYVYMPWISERFKKDYLDNVNNRNAILRYNYEDLFIMRAGFSLSYNRNDDVAIRAKVESAGNLLSIADNLSNFKKNEQGQSKIFNIAYAQYLKFDFAFTRILRFDPRNSLALHADFGIAYPYGNSKVLPFEKRYIAGGPNSVRGWSVRELGPGGFRGTDGRIDFINQTGDLKLNLNAEYRTRLFWKFDGAAFIDAGNIWTLREYAEQPDGQFRFDKFWQQIAAAYGLGLRLNFDYFILRFDAGMKAINPAYTSLKEHFPLFRPRFGRDFTFHFAVGLPF
>NC_017860.1|WP_044047422.1|383085_383838_+|RNA-methyltransferase
MISKNKIKLVRALETKKGREKQGLFVAEGPKVVGDLLAAGFELVELFEEEEDIKKVSFLQHPQGKLGIFKLPEQTKTKVGECETAVGAERKVLLGENELALALDGVQDPGNLGTIIRVADWFGIERIFCSMDTADCWNPKVVQATMGSIARVKMYYLNLNELINSLPTDYPIYGTLLDGEDIYEEKLSANGLIVMGNEGNGISAAIRQRVNRKLLIPNFSVGTTRAESLNVAIATAVVCSEFKRREQRKV
>NC_017860.1|WP_044047424.1|383873_384449_+|hypothetical-protein
MEDLIKERSVKSCIALGYKHWQQHLGETFRRTRWRILLSAVMFTAFIISALMGAPNWLYIILLTFSMNSVAVKVRSLAGEMETAQKGKKLIKKNLGYYVYFFCLSLIVKLCTILVVGAPLLLLIYMHWLDSETVKMGDPSTLSTTYWVLTGLTAFATTIAVRFIDTWEDYAELYIFGTMITRNRTRRQGKA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_017860_1	1.14\|195412\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	195412-195441	30	MW067001	CrAssphage sp. C0521BW15, complete genome	64942-64971	3	0.9
NC_017860_1	1.14\|195412\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	195412-195441	30	MW067000	CrAssphage sp. C0521BD4, complete genome	64942-64971	3	0.9
NC_017860_1	1.14\|195412\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	195412-195441	30	MK069403	UNVERIFIED: CrAssphage sp. O-152, partial genome	52766-52795	3	0.9
NC_017860_1	1.14\|195412\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	195412-195441	30	BK010471	TPA_asm: Uncultured crAssphage, complete genome	63845-63874	3	0.9
NC_017860_1	1.14\|195412\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	195412-195441	30	NC_024711	Uncultured crAssphage, complete genome	63845-63874	3	0.9
NC_017860_1	1.14\|195412\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	195412-195441	30	JQ995537	Uncultured phage crAssphage, complete genome	63845-63874	3	0.9
NC_017860_1	1.14\|195412\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	195412-195441	30	MK415404	CrAssphage FA1-2_000172F, complete genome	14176-14205	3	0.9
NC_017860_1	1.14\|195412\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	195412-195441	30	MK415403	CrAssphage ES_ALL_000190F, complete genome	14403-14432	3	0.9
NC_017860_1	1.14\|195412\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	195412-195441	30	MK415410	CrAssphage YS1-2_2437, complete genome	14677-14706	3	0.9
NC_017860_1	1.6\|194887\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194887-194916	30	MN693988	Marine virus AFVG_250M765, complete genome	466-495	4	0.867
NC_017860_1	1.8\|195018\|28\|NC_017860\|PILER-CR,CRISPRCasFinder	195018-195045	28	NZ_CP012025	Bacillus smithii strain DSM 4216 plasmid pDSM4216, complete sequence	2165-2192	5	0.821
NC_017860_1	1.5\|194821\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194821-194850	30	NC_011738	Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence	239927-239956	6	0.8
NC_017860_1	1.5\|194821\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194821-194850	30	NC_011738	Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence	45118-45147	6	0.8
NC_017860_1	1.5\|194821\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194821-194850	30	NC_011738	Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence	224665-224694	6	0.8
NC_017860_1	1.6\|194887\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194887-194916	30	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	31274-31303	6	0.8
NC_017860_1	1.6\|194887\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194887-194916	30	NZ_MK134375	Acinetobacter baumannii strain 34AB plasmid p34AB, complete sequence	135109-135138	6	0.8
NC_017860_1	1.11\|195214\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	195214-195243	30	NC_013697	Deftia phage phiW-14, complete genome	17446-17475	6	0.8
NC_017860_1	1.4\|194756\|29\|NC_017860\|PILER-CR,CRISPRCasFinder	194756-194784	29	KJ135004	Enterobacteria phage Bp4, complete genome	66750-66778	7	0.759
NC_017860_1	1.4\|194756\|29\|NC_017860\|PILER-CR,CRISPRCasFinder	194756-194784	29	JX415535	Escherichia phage ECBP1, complete genome	6251-6279	7	0.759
NC_017860_1	1.4\|194756\|29\|NC_017860\|PILER-CR,CRISPRCasFinder	194756-194784	29	MH669274	Escherichia phage PD38, complete genome	5807-5835	7	0.759
NC_017860_1	1.4\|194756\|29\|NC_017860\|PILER-CR,CRISPRCasFinder	194756-194784	29	NC_015390	Carnobacterium sp. 17-4 plasmid pCAR50, complete sequence	36666-36694	7	0.759
NC_017860_1	1.6\|194887\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194887-194916	30	NZ_LR215030	Mycoplasma ovipneumoniae strain NCTC10151 plasmid 6	1719-1748	7	0.767
NC_017860_1	1.6\|194887\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194887-194916	30	NZ_CP013332	Fusobacterium hwasookii ChDC F174 plasmid unnamed1, complete sequence	35188-35217	7	0.767
NC_017860_1	1.6\|194887\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194887-194916	30	NZ_CP011152	Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence	567377-567406	7	0.767
NC_017860_1	1.6\|194887\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194887-194916	30	MN856010	Bacteriophage sp. isolate 58, complete genome	2446-2475	7	0.767
NC_017860_1	1.6\|194887\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194887-194916	30	MK250027	Prevotella phage Lak-B8, complete genome	236955-236984	7	0.767
NC_017860_1	1.6\|194887\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194887-194916	30	MK250026	Prevotella phage Lak-B7, complete genome	236013-236042	7	0.767
NC_017860_1	1.6\|194887\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194887-194916	30	NZ_CP011154	Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence	570621-570650	7	0.767
NC_017860_1	1.13\|195346\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	195346-195375	30	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	23077-23106	7	0.767
NC_017860_1	1.13\|195346\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	195346-195375	30	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	299067-299096	7	0.767
NC_017860_1	1.14\|195412\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	195412-195441	30	AP014232	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C92-MedDCM-OCT-S30-C60, * SEQUENCING IN PROGRESS *	16819-16848	7	0.767
NC_017860_1	1.16\|195543\|29\|NC_017860\|PILER-CR,CRISPRCasFinder	195543-195571	29	CAJCJZ010000002	Enterococcus phage vB_EfaS_140 genome assembly, contig: phage140-genome, whole genome shotgun sequence	29220-29248	7	0.759
NC_017860_1	1.6\|194887\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194887-194916	30	NZ_CP022984	Bacillus kochii strain BDGP4 plasmid pBkBDGP4A, complete sequence	136713-136742	8	0.733
NC_017860_1	1.11\|195214\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	195214-195243	30	MN855619	Siphoviridae sp. isolate 157, complete genome	4086-4115	8	0.733
NC_017860_1	1.12\|195280\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	195280-195309	30	NZ_AP019800	Vibrio rotiferianus strain AM7 plasmid pAM7, complete sequence	45749-45778	8	0.733
NC_017860_1	1.21\|194816\|35\|NC_017860\|CRT	194816-194850	35	NC_011738	Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence	239927-239961	8	0.771
NC_017860_1	1.21\|194816\|35\|NC_017860\|CRT	194816-194850	35	NC_011738	Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence	45113-45147	8	0.771
NC_017860_1	1.21\|194816\|35\|NC_017860\|CRT	194816-194850	35	NC_011738	Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence	224660-224694	8	0.771
NC_017860_1	1.6\|194887\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194887-194916	30	AP011616	Thermus phage phiYS40 DNA, complete genome	120910-120939	9	0.7
NC_017860_1	1.6\|194887\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194887-194916	30	DQ997624	Thermus thermophilus phage YS40, complete genome	120910-120939	9	0.7
NC_017860_1	1.6\|194887\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194887-194916	30	NC_015937	Thermus phage TMA, complete genome	120024-120053	9	0.7
NC_017860_1	1.6\|194887\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194887-194916	30	NC_008584	Thermus phage phiYS40, complete genome	120910-120939	9	0.7
NC_017860_1	1.6\|194887\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	194887-194916	30	AP011617	Thermus phage TMA DNA, complete genome	120024-120053	9	0.7
NC_017860_1	1.20\|194751\|34\|NC_017860\|CRT	194751-194784	34	JX415535	Escherichia phage ECBP1, complete genome	6251-6284	9	0.735
NC_017860_1	1.20\|194751\|34\|NC_017860\|CRT	194751-194784	34	MH669274	Escherichia phage PD38, complete genome	5807-5840	9	0.735
NC_017860_1	1.20\|194751\|34\|NC_017860\|CRT	194751-194784	34	KJ135004	Enterobacteria phage Bp4, complete genome	66745-66778	9	0.735
NC_017860_1	1.11\|195214\|30\|NC_017860\|PILER-CR,CRISPRCasFinder	195214-195243	30	HQ633061	Synechococcus phage S-CBM2, * SEQUENCING IN PROGRESS *, 6 unordered pieces	59002-59031	10	0.667
NC_017860_1	1.27\|195209\|35\|NC_017860\|CRT	195209-195243	35	NC_013697	Deftia phage phiW-14, complete genome	17441-17475	11	0.686

1. spacer 1.14|195412|30|NC_017860|PILER-CR,CRISPRCasFinder matches to MW067001 (CrAssphage sp. C0521BW15, complete genome) position: , mismatch: 3, identity: 0.9

atacaggagcaagaatagaactattaagaa	CRISPR spacer
acacaggagcaagaatagcactattaacaa	Protospacer
*.**************** ******** **

2. spacer 1.14|195412|30|NC_017860|PILER-CR,CRISPRCasFinder matches to MW067000 (CrAssphage sp. C0521BD4, complete genome) position: , mismatch: 3, identity: 0.9

atacaggagcaagaatagaactattaagaa	CRISPR spacer
acacaggagcaagaatagcactattaacaa	Protospacer
*.**************** ******** **

3. spacer 1.14|195412|30|NC_017860|PILER-CR,CRISPRCasFinder matches to MK069403 (UNVERIFIED: CrAssphage sp. O-152, partial genome) position: , mismatch: 3, identity: 0.9

atacaggagcaagaatagaactattaagaa	CRISPR spacer
acacaggagcaagaatagcactattaacaa	Protospacer
*.**************** ******** **

4. spacer 1.14|195412|30|NC_017860|PILER-CR,CRISPRCasFinder matches to BK010471 (TPA_asm: Uncultured crAssphage, complete genome) position: , mismatch: 3, identity: 0.9

atacaggagcaagaatagaactattaagaa	CRISPR spacer
acacaggagcaagaatagcactattaacaa	Protospacer
*.**************** ******** **

5. spacer 1.14|195412|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NC_024711 (Uncultured crAssphage, complete genome) position: , mismatch: 3, identity: 0.9

atacaggagcaagaatagaactattaagaa	CRISPR spacer
acacaggagcaagaatagcactattaacaa	Protospacer
*.**************** ******** **

6. spacer 1.14|195412|30|NC_017860|PILER-CR,CRISPRCasFinder matches to JQ995537 (Uncultured phage crAssphage, complete genome) position: , mismatch: 3, identity: 0.9

atacaggagcaagaatagaactattaagaa	CRISPR spacer
acacaggagcaagaatagcactattaacaa	Protospacer
*.**************** ******** **

7. spacer 1.14|195412|30|NC_017860|PILER-CR,CRISPRCasFinder matches to MK415404 (CrAssphage FA1-2_000172F, complete genome) position: , mismatch: 3, identity: 0.9

atacaggagcaagaatagaactattaagaa	CRISPR spacer
acacaggagcaagaatagcactattaacaa	Protospacer
*.**************** ******** **

8. spacer 1.14|195412|30|NC_017860|PILER-CR,CRISPRCasFinder matches to MK415403 (CrAssphage ES_ALL_000190F, complete genome) position: , mismatch: 3, identity: 0.9

atacaggagcaagaatagaactattaagaa	CRISPR spacer
acacaggagcaagaatagcactattaacaa	Protospacer
*.**************** ******** **

9. spacer 1.14|195412|30|NC_017860|PILER-CR,CRISPRCasFinder matches to MK415410 (CrAssphage YS1-2_2437, complete genome) position: , mismatch: 3, identity: 0.9

atacaggagcaagaatagaactattaagaa	CRISPR spacer
acacaggagcaagaatagcactattaacaa	Protospacer
*.**************** ******** **

10. spacer 1.6|194887|30|NC_017860|PILER-CR,CRISPRCasFinder matches to MN693988 (Marine virus AFVG_250M765, complete genome) position: , mismatch: 4, identity: 0.867

agaaacaaatattgaggaaaaat--taaaatc	CRISPR spacer
agaaacaaatattgggaaaaaatagtaaaa--	Protospacer
**************.*.******  *****

11. spacer 1.8|195018|28|NC_017860|PILER-CR,CRISPRCasFinder matches to NZ_CP012025 (Bacillus smithii strain DSM 4216 plasmid pDSM4216, complete sequence) position: , mismatch: 5, identity: 0.821

taggtcaattgtgccacaaaacaaataa	CRISPR spacer
gattacaattgtgccacaaaataaataa	Protospacer
 *   ****************.******

12. spacer 1.5|194821|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NC_011738 (Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence) position: , mismatch: 6, identity: 0.8

ttattatcacactgttaaagattggagtga	CRISPR spacer
ttattatcacattggtaaagattggaaaat	Protospacer
***********.** ***********. .

13. spacer 1.5|194821|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NC_011738 (Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence) position: , mismatch: 6, identity: 0.8

ttattatcacactgttaaagattggagtga	CRISPR spacer
ttattatcacattggtaaagattggaaaat	Protospacer
***********.** ***********. .

14. spacer 1.5|194821|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NC_011738 (Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence) position: , mismatch: 6, identity: 0.8

ttattatcacactgttaaagattggagtga	CRISPR spacer
ttattatcacattggtaaagattggaaaat	Protospacer
***********.** ***********. .

15. spacer 1.6|194887|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.8

agaaacaaatattgaggaaaaattaaaatc	CRISPR spacer
tgtcagaaagattgaggaaaaattaaaatt	Protospacer
 *  * *** *******************.

16. spacer 1.6|194887|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NZ_MK134375 (Acinetobacter baumannii strain 34AB plasmid p34AB, complete sequence) position: , mismatch: 6, identity: 0.8

agaaacaaatattgaggaaaaa---ttaaaatc	CRISPR spacer
agaaatatatattgaggaaaaatggttcaa---	Protospacer
*****.* **************   ** **

17. spacer 1.11|195214|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NC_013697 (Deftia phage phiW-14, complete genome) position: , mismatch: 6, identity: 0.8

gtatggttacgaacttgttcttgccagagt	CRISPR spacer
gtttggtgacgaacttgttcttgccgggcc	Protospacer
** **** *****************.*. .

18. spacer 1.4|194756|29|NC_017860|PILER-CR,CRISPRCasFinder matches to KJ135004 (Enterobacteria phage Bp4, complete genome) position: , mismatch: 7, identity: 0.759

ttttatctactttcacgtattgttaagga	CRISPR spacer
cgatatctactttcaggtattgtttagcg	Protospacer
.  ************ ******** ** .

19. spacer 1.4|194756|29|NC_017860|PILER-CR,CRISPRCasFinder matches to JX415535 (Escherichia phage ECBP1, complete genome) position: , mismatch: 7, identity: 0.759

ttttatctactttcacgtattgttaagga	CRISPR spacer
cgatatctactttcaggtattgtttagcg	Protospacer
.  ************ ******** ** .

20. spacer 1.4|194756|29|NC_017860|PILER-CR,CRISPRCasFinder matches to MH669274 (Escherichia phage PD38, complete genome) position: , mismatch: 7, identity: 0.759

ttttatctactttcacgtattgttaagga	CRISPR spacer
cgatatctactttcaggtattgtttagcg	Protospacer
.  ************ ******** ** .

21. spacer 1.4|194756|29|NC_017860|PILER-CR,CRISPRCasFinder matches to NC_015390 (Carnobacterium sp. 17-4 plasmid pCAR50, complete sequence) position: , mismatch: 7, identity: 0.759

ttttatctactttcacgtattgttaagga	CRISPR spacer
ctttatctaatttcatgtattgttttaaa	Protospacer
.******** *****.********  ..*

22. spacer 1.6|194887|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NZ_LR215030 (Mycoplasma ovipneumoniae strain NCTC10151 plasmid 6) position: , mismatch: 7, identity: 0.767

agaaacaaatattgaggaaaaattaaaatc	CRISPR spacer
ccgtaaaaatatggaggaaaaattaaagtc	Protospacer
  . * ****** **************.**

23. spacer 1.6|194887|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NZ_CP013332 (Fusobacterium hwasookii ChDC F174 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

agaaacaaatattgaggaaaaattaaaatc	CRISPR spacer
tttaaacaatattgaagaaaaattaaagtc	Protospacer
   **  ********.***********.**

24. spacer 1.6|194887|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NZ_CP011152 (Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence) position: , mismatch: 7, identity: 0.767

agaaacaaatattgaggaaaaattaaaatc	CRISPR spacer
tcaataaaatatagaggaaaaattataatt	Protospacer
  **  ****** ************ ***.

25. spacer 1.6|194887|30|NC_017860|PILER-CR,CRISPRCasFinder matches to MN856010 (Bacteriophage sp. isolate 58, complete genome) position: , mismatch: 7, identity: 0.767

agaaacaaatattgaggaaaaattaaaatc	CRISPR spacer
aaattgaaatattgatgaaaaatcaaaatg	Protospacer
*.*   ********* *******.*****

26. spacer 1.6|194887|30|NC_017860|PILER-CR,CRISPRCasFinder matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 7, identity: 0.767

agaaacaaatattgaggaaaaattaaaatc	CRISPR spacer
aattaaaaatattgatgaagaattaaaata	Protospacer
*.  * ********* ***.*********

27. spacer 1.6|194887|30|NC_017860|PILER-CR,CRISPRCasFinder matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 7, identity: 0.767

agaaacaaatattgaggaaaaattaaaatc	CRISPR spacer
aattaaaaatattgatgaagaattaaaata	Protospacer
*.  * ********* ***.*********

28. spacer 1.6|194887|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NZ_CP011154 (Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence) position: , mismatch: 7, identity: 0.767

agaaacaaatattgaggaaaaattaaaatc	CRISPR spacer
tcaataaaatatagaggaaaaattataatt	Protospacer
  **  ****** ************ ***.

29. spacer 1.13|195346|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 7, identity: 0.767

agatactataatagaactatatcaagaatt	CRISPR spacer
atatactataataaaactatattaattcat	Protospacer
* ***********.********.**    *

30. spacer 1.13|195346|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 7, identity: 0.767

agatactataatagaactatatcaagaatt	CRISPR spacer
atatactataataaaactatattaattcat	Protospacer
* ***********.********.**    *

31. spacer 1.14|195412|30|NC_017860|PILER-CR,CRISPRCasFinder matches to AP014232 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C92-MedDCM-OCT-S30-C60, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

atacaggagcaagaatagaactattaagaa	CRISPR spacer
gcacagcagcaggaatagaactattggtaa	Protospacer
..**** ****.*************.. **

32. spacer 1.16|195543|29|NC_017860|PILER-CR,CRISPRCasFinder matches to CAJCJZ010000002 (Enterococcus phage vB_EfaS_140 genome assembly, contig: phage140-genome, whole genome shotgun sequence) position: , mismatch: 7, identity: 0.759

ggctatggaaaacgtagacgcaaacgcta	CRISPR spacer
atttatggaaaacttagaggcaaacgttg	Protospacer
. .********** **** *******.*.

33. spacer 1.6|194887|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NZ_CP022984 (Bacillus kochii strain BDGP4 plasmid pBkBDGP4A, complete sequence) position: , mismatch: 8, identity: 0.733

agaaacaaatattgaggaaaaattaaaatc	CRISPR spacer
cattacaaattttgaggaaaaactaaaaat	Protospacer
 .  ****** ***********.***** .

34. spacer 1.11|195214|30|NC_017860|PILER-CR,CRISPRCasFinder matches to MN855619 (Siphoviridae sp. isolate 157, complete genome) position: , mismatch: 8, identity: 0.733

gtatggttacgaacttgttcttgccagagt	CRISPR spacer
aagggtttccgaacttgttcttgccatagg	Protospacer
. . * ** ***************** **

35. spacer 1.12|195280|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NZ_AP019800 (Vibrio rotiferianus strain AM7 plasmid pAM7, complete sequence) position: , mismatch: 8, identity: 0.733

tggtgctaagagcgtaaaggaccttaaggt	CRISPR spacer
cctgaataagagcgtaaaggactttaagga	Protospacer
.   . ****************.******

36. spacer 1.21|194816|35|NC_017860|CRT matches to NC_011738 (Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence) position: , mismatch: 8, identity: 0.771

gcaacttattatcacactgttaaagattggagtga	CRISPR spacer
agaacttattatcacattggtaaagattggaaaat	Protospacer
. **************.** ***********. .

37. spacer 1.21|194816|35|NC_017860|CRT matches to NC_011738 (Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence) position: , mismatch: 8, identity: 0.771

gcaacttattatcacactgttaaagattggagtga	CRISPR spacer
agaacttattatcacattggtaaagattggaaaat	Protospacer
. **************.** ***********. .

38. spacer 1.21|194816|35|NC_017860|CRT matches to NC_011738 (Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence) position: , mismatch: 8, identity: 0.771

gcaacttattatcacactgttaaagattggagtga	CRISPR spacer
agaacttattatcacattggtaaagattggaaaat	Protospacer
. **************.** ***********. .

39. spacer 1.6|194887|30|NC_017860|PILER-CR,CRISPRCasFinder matches to AP011616 (Thermus phage phiYS40 DNA, complete genome) position: , mismatch: 9, identity: 0.7

agaaacaaatattgaggaaaaattaaaatc	CRISPR spacer
cgcaacaaattttgaggaaaaattttgcga	Protospacer
 * ******* *************  .

40. spacer 1.6|194887|30|NC_017860|PILER-CR,CRISPRCasFinder matches to DQ997624 (Thermus thermophilus phage YS40, complete genome) position: , mismatch: 9, identity: 0.7

agaaacaaatattgaggaaaaattaaaatc	CRISPR spacer
cgcaacaaattttgaggaaaaattttgcga	Protospacer
 * ******* *************  .

41. spacer 1.6|194887|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NC_015937 (Thermus phage TMA, complete genome) position: , mismatch: 9, identity: 0.7

agaaacaaatattgaggaaaaattaaaatc	CRISPR spacer
cgcaacaaatcttgaggaaaaattttgcga	Protospacer
 * ******* *************  .

42. spacer 1.6|194887|30|NC_017860|PILER-CR,CRISPRCasFinder matches to NC_008584 (Thermus phage phiYS40, complete genome) position: , mismatch: 9, identity: 0.7

agaaacaaatattgaggaaaaattaaaatc	CRISPR spacer
cgcaacaaattttgaggaaaaattttgcga	Protospacer
 * ******* *************  .

43. spacer 1.6|194887|30|NC_017860|PILER-CR,CRISPRCasFinder matches to AP011617 (Thermus phage TMA DNA, complete genome) position: , mismatch: 9, identity: 0.7

agaaacaaatattgaggaaaaattaaaatc	CRISPR spacer
cgcaacaaatcttgaggaaaaattttgcga	Protospacer
 * ******* *************  .

44. spacer 1.20|194751|34|NC_017860|CRT matches to JX415535 (Escherichia phage ECBP1, complete genome) position: , mismatch: 9, identity: 0.735

----gcaacttttatctactttcacgtattgttaagga	CRISPR spacer
attggcga----tatctactttcaggtattgtttagcg	Protospacer
    **.*    ************ ******** ** .

45. spacer 1.20|194751|34|NC_017860|CRT matches to MH669274 (Escherichia phage PD38, complete genome) position: , mismatch: 9, identity: 0.735

----gcaacttttatctactttcacgtattgttaagga	CRISPR spacer
attggcga----tatctactttcaggtattgtttagcg	Protospacer
    **.*    ************ ******** ** .

46. spacer 1.20|194751|34|NC_017860|CRT matches to KJ135004 (Enterobacteria phage Bp4, complete genome) position: , mismatch: 9, identity: 0.735

----gcaacttttatctactttcacgtattgttaagga	CRISPR spacer
attggcga----tatctactttcaggtattgtttagcg	Protospacer
    **.*    ************ ******** ** .

47. spacer 1.11|195214|30|NC_017860|PILER-CR,CRISPRCasFinder matches to HQ633061 (Synechococcus phage S-CBM2, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces) position: , mismatch: 10, identity: 0.667

gtatggttacgaacttgttcttgccagagt	CRISPR spacer
cgatggttacgaacttgttgttgatgtctc	Protospacer
  ***************** *** ..   .

48. spacer 1.27|195209|35|NC_017860|CRT matches to NC_013697 (Deftia phage phiW-14, complete genome) position: , mismatch: 11, identity: 0.686

acaacgtatggttacgaacttgttcttgccagagt	CRISPR spacer
ctgctgtttggtgacgaacttgttcttgccgggcc	Protospacer
 .. .** **** *****************.*. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

372988 : 420918

Paenibacillus_phage(14.29%)

integrase,transposase,tRNA

attL 415583:415601|attR 430817:430835

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014710207.1\|372988_374206_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_014708581.1\|374827_376207_-	DNA repair protein RadA	NA	NA	NA	NA
WP_014708582.1\|376273_377173_+	hypothetical protein	NA	NA	NA	NA
WP_014708584.1\|377262_379425_+	hypothetical protein	NA	NA	NA	NA
WP_014708586.1\|379801_380605_-	MBL fold metallo-hydrolase	A0A0C5AJ36	Paenibacillus_phage	7.8e-30	32.1
WP_044047420.1\|380727_383001_-	BamA/TamA family outer membrane protein	NA	NA	NA	NA
WP_044047422.1\|383085_383838_+	RNA methyltransferase	NA	NA	NA	NA
WP_044047424.1\|383873_384449_+	hypothetical protein	NA	NA	NA	NA
WP_014708591.1\|384827_386309_-\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	1.9e-98	40.9
WP_014708592.1\|386579_387260_+	OmpA family protein	NA	NA	NA	NA
WP_044047510.1\|387751_388789_-	YeiH family putative sulfate export transporter	NA	NA	NA	NA
WP_014708594.1\|389075_391550_+	ferrous iron transport protein B	NA	NA	NA	NA
WP_014708595.1\|391667_392810_+	penicillin-binding protein 2	NA	NA	NA	NA
WP_014708596.1\|393050_393902_+	patatin family protein	NA	NA	NA	NA
WP_014708597.1\|394299_396399_+	anaerobic ribonucleoside-triphosphate reductase	A0A060AN10	Cronobacter_phage	6.3e-180	51.5
WP_014708598.1\|396520_396988_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	NA	NA	NA
WP_014708600.1\|397349_398642_-	ATP-binding protein	NA	NA	NA	NA
WP_044047427.1\|399324_399978_-	rubrerythrin	NA	NA	NA	NA
WP_014708603.1\|401303_402497_-	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA
WP_014708604.1\|403201_403666_+	MaoC family dehydratase	NA	NA	NA	NA
WP_014708605.1\|403872_404664_-	pyruvate formate lyase-activating protein	NA	NA	NA	NA
WP_014708607.1\|404899_407146_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	8.9e-164	40.9
WP_014708608.1\|408172_408484_+	hypothetical protein	NA	NA	NA	NA
WP_014708609.1\|408498_409398_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_044047513.1\|409508_411005_-	helicase	I3PUW5	Vibrio_phage	3.3e-37	27.7
WP_144439213.1\|413251_413572_+\|transposase	transposase	NA	NA	NA	NA
WP_044047428.1\|413674_414910_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	3.4e-24	37.8
415583:415601	attL	NA	NA	NA	NA
WP_044047431.1\|415603_416503_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_014708614.1\|417116_417431_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_014708615.1\|417418_417925_+	DUF3408 domain-containing protein	NA	NA	NA	NA
WP_014708617.1\|419561_419984_+	hypothetical protein	NA	NA	NA	NA
WP_014708618.1\|419991_420918_-\|integrase	site-specific integrase	A0A2P0ZL94	Lactobacillus_phage	6.1e-18	24.7
430817:430835	attR	NA	NA	NA	NA

DBSCAN-SWA_2

430922 : 492449

Bacillus_phage(21.43%)

integrase,transposase,tRNA

attL 430815:430835|attR 490155:490175

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
430815:430835	attL	NA	NA	NA	NA
WP_014708626.1\|430922_431822_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_080574639.1\|431818_432553_+	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	1.7e-26	39.2
WP_014708628.1\|432739_433168_-	hypothetical protein	NA	NA	NA	NA
WP_076169446.1\|433188_433446_-	hypothetical protein	NA	NA	NA	NA
WP_014708630.1\|433798_434146_-	hypothetical protein	NA	NA	NA	NA
WP_014708631.1\|434801_436034_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.4e-33	39.9
WP_014708633.1\|436515_437808_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_014708634.1\|437815_439369_+	ATP-binding protein	E5E3R2	Burkholderia_phage	8.9e-14	25.8
WP_014708635.1\|439721_441044_-	ATP-binding protein	NA	NA	NA	NA
WP_014708636.1\|441162_441822_-	hypothetical protein	NA	NA	NA	NA
WP_014708637.1\|441843_442767_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_014708638.1\|442763_443111_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_014708639.1\|443215_444106_-	mobilization protein	NA	NA	NA	NA
WP_014708640.1\|444301_445339_-	AAA family ATPase	NA	NA	NA	NA
WP_014708641.1\|445335_445644_-	DUF3853 family protein	NA	NA	NA	NA
WP_009163356.1\|446001_446205_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014708642.1\|446296_449617_+	SNF2 family helicase	A0A2K5B2B9	Erysipelothrix_phage	5.7e-42	22.8
WP_014708644.1\|452991_453921_-	class I SAM-dependent DNA methyltransferase	NA	NA	NA	NA
WP_044047435.1\|453902_454514_-	master DNA invertase Mpi family serine-type recombinase	H2A0H0	Bacteroides_phage	5.7e-73	74.9
WP_014708647.1\|455148_455940_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_014708648.1\|456514_458164_-	S8 family peptidase	A0A217EQY2	Bacillus_phage	4.7e-45	41.2
WP_014708650.1\|459765_460155_-	DUF3127 domain-containing protein	NA	NA	NA	NA
WP_014708651.1\|460439_461564_+	DNA polymerase III subunit beta	R9TRR6	Rhizobium_phage	3.6e-33	29.9
WP_044047437.1\|461635_462490_+	3'-5' exonuclease	A0A1P8VWC8	Flavobacterium_phage	1.6e-36	39.3
WP_014708653.1\|462492_463695_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	6.0e-34	30.2
WP_044047438.1\|463669_464557_+	DUF4835 family protein	NA	NA	NA	NA
WP_014708655.1\|464568_466239_+	DNA repair protein RecN	NA	NA	NA	NA
WP_014708656.1\|466253_467921_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_044047440.1\|468481_469702_-	hypothetical protein	NA	NA	NA	NA
WP_014708657.1\|470773_472402_-	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA
WP_014708658.1\|473718_473868_+	hypothetical protein	NA	NA	NA	NA
WP_014708659.1\|474435_476010_-	hypothetical protein	NA	NA	NA	NA
WP_014708661.1\|477022_477886_+	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_014708662.1\|477978_479013_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.9e-69	43.5
WP_014708663.1\|479025_479574_+	CinA family protein	B5TK85	Pseudomonas_phage	2.1e-18	43.6
WP_014708664.1\|480721_480886_-	rubredoxin	NA	NA	NA	NA
WP_014708665.1\|480994_483382_-	TonB-dependent receptor	NA	NA	NA	NA
WP_014708666.1\|483597_484236_+	DUF4827 domain-containing protein	NA	NA	NA	NA
WP_014708667.1\|484302_485694_+	phosphoglucosamine mutase	A0A127AWJ1	Bacillus_phage	9.1e-26	25.1
WP_014708668.1\|485704_486319_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_014708669.1\|486322_488104_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	6.0e-46	28.9
WP_014710038.1\|488711_489929_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_044047441.1\|490177_491077_-\|transposase	IS982 family transposase	NA	NA	NA	NA
490155:490175	attR	NA	NA	NA	NA
WP_014708671.1\|491231_492449_+\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	1.4e-41	32.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_017861

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_017861_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017861_1

246278-249242

TypeII

Consensus_repeat	Method
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CRISPRCasFinder
NCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CRT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	PILER-CR

38 spacers

cas2,cas1,cas9

The CRISPR arrays of NC_017861_1

>merge|NC_017861|1|246278-249242|CRISPRCasFinder,CRT,PILER-CR
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACATAAAATTTAAAATTATGCAAACTTTTTTGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACGGACAACTTCAAAAAGTTATCTTTCAGCGGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACCGCCCTATCGTCATTTCAATGCCACCGAGTGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACCAAAAGCGGTCGTAAGGGCTTTTATCCCGGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACTGGTGCAACCAAGTGGAGCGTATATTGTAGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACTATCAAATACAGGCGCATACTCCTTGTACAGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACTTTCTTCAAATAATTTCCTGTGCCTACGTTGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACTTTTTCGTTTCGTTCACACGTTGATATTCGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACCCTGCTCTACTTGTTGTATAGTTTCGTTCTGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACAGGAAAGAATAAACAGTGCTTGGAAATAATGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACCGCCTCAACATTGCCAATATCCTCTCTCTAGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACCTTAGGTATGTTAGTTAGTGGTGCTGTTGGGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACGGCTATGCGCTCGATGCATATAATACTAAGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACCACAGACACATCAATAATAGTAACTTTCTCGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACGCGGGTGCAGCACTTGCCTACTTATACACAGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACTTGAAAATTATTGACATTAAAGGAAAGGGCGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACATTTAATCTAAAAACTTTCATATTTATTTAGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACCACGTGTAACGATAGCACAGTTTCCGTCCTGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACCTGCCACCGTAACAACGTTTGAGCCATTAAGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACAATAAACTGTAATACTTCTTTTAGGTCTACGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACTATACGACCAAATATTGAAGCAGAACCTTAGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACTGACGCTATGGGTTACGAACTTACCCCAATGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACGGAAAGATGTTGTTGTATTGCTTGCTGCAGGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACCAACAACGTTAAAAAGTGGCAACCCATTTAGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACGCCCGTCAAATACTCGGCTTAGCTTATCAAGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACCCACTCGAAAAAGGTAGTATCGGACGAAGAGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACAAGCTCAAAGCCTTTACAATGCTGCTATTAGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACAGGGGATTTAATAATGACATACCACTAGGTGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACCGATTGTTTTCTCGTCGCCTTTCACGAGTGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACGGAAACATAAAACCTAAATTCATATCCTTTGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACTGTCAGCCTTTCCGTATTTGTCCTTTGGCAGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACTTCTATTTGGTCTGATAATTTAAATTATGGGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACGGTTATTCTCTCGACCCTAATTGTCAGAATGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACATGCCGAAGATGTAAGTAATGGTAGTGCCAGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACTAAAAATTTATATTGAAAAGATATGATAAAGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACAAACAGTCTTTGAAAATCTTGTGAAAATGCGTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAACGACTATGGTATCTTCGTTATCGTCTACTTGTTGTATTTACCAATGCAAAGATACTAATTTTAAAGCTAATCACAACAACCTCCGAGCACATTACGAAATGCCTACTGTTGTATTTACCAATGCAAAGATACCAATTCTAAAGCAATCACAACT

>NC_017861|1|1|246278-249242|CRISPRCasFinder
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	ATAAAATTTAAAATTATGCAAACTTTTTT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GGACAACTTCAAAAAGTTATCTTTCAGCG
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CGCCCTATCGTCATTTCAATGCCACCGAGT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CAAAAGCGGTCGTAAGGGCTTTTATCCCG
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TGGTGCAACCAAGTGGAGCGTATATTGTA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TATCAAATACAGGCGCATACTCCTTGTACA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TTTCTTCAAATAATTTCCTGTGCCTACGTT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TTTTTCGTTTCGTTCACACGTTGATATTC
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CCTGCTCTACTTGTTGTATAGTTTCGTTCT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	AGGAAAGAATAAACAGTGCTTGGAAATAAT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CGCCTCAACATTGCCAATATCCTCTCTCTA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CTTAGGTATGTTAGTTAGTGGTGCTGTTGG
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GGCTATGCGCTCGATGCATATAATACTAA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CACAGACACATCAATAATAGTAACTTTCTC
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GCGGGTGCAGCACTTGCCTACTTATACACA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TTGAAAATTATTGACATTAAAGGAAAGGGC
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	ATTTAATCTAAAAACTTTCATATTTATTTA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CACGTGTAACGATAGCACAGTTTCCGTCCT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CTGCCACCGTAACAACGTTTGAGCCATTAA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	AATAAACTGTAATACTTCTTTTAGGTCTAC
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TATACGACCAAATATTGAAGCAGAACCTTA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TGACGCTATGGGTTACGAACTTACCCCAAT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GGAAAGATGTTGTTGTATTGCTTGCTGCAG
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CAACAACGTTAAAAAGTGGCAACCCATTTA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GCCCGTCAAATACTCGGCTTAGCTTATCAA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CCACTCGAAAAAGGTAGTATCGGACGAAGA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	AAGCTCAAAGCCTTTACAATGCTGCTATTA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	AGGGGATTTAATAATGACATACCACTAGGT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CGATTGTTTTCTCGTCGCCTTTCACGAGT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GGAAACATAAAACCTAAATTCATATCCTTT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TGTCAGCCTTTCCGTATTTGTCCTTTGGCA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TTCTATTTGGTCTGATAATTTAAATTATGG
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GGTTATTCTCTCGACCCTAATTGTCAGAAT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	ATGCCGAAGATGTAAGTAATGGTAGTGCCA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TAAAAATTTATATTGAAAAGATATGATAAA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	AAACAGTCTTTGAAAATCTTGTGAAAATGC
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GACTATGGTATCTTCGTTATCGTCTACTT
GTTGTATTTACCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	AACCTCCGAGCACATTACGAAATGCCTACT
GTTGTATTTACCAATGCAAAGATACCAATTCTAAAGCAATCACAACT

>NC_017861|1|1|246288-249241|CRT
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	ATAAAATTTAAAATTATGCAAACTTTTTTGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GGACAACTTCAAAAAGTTATCTTTCAGCGGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CGCCCTATCGTCATTTCAATGCCACCGAGTGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CAAAAGCGGTCGTAAGGGCTTTTATCCCGGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TGGTGCAACCAAGTGGAGCGTATATTGTAGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TATCAAATACAGGCGCATACTCCTTGTACAGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TTTCTTCAAATAATTTCCTGTGCCTACGTTGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TTTTTCGTTTCGTTCACACGTTGATATTCGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CCTGCTCTACTTGTTGTATAGTTTCGTTCTGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	AGGAAAGAATAAACAGTGCTTGGAAATAATGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CGCCTCAACATTGCCAATATCCTCTCTCTAGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CTTAGGTATGTTAGTTAGTGGTGCTGTTGGGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GGCTATGCGCTCGATGCATATAATACTAAGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CACAGACACATCAATAATAGTAACTTTCTCGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GCGGGTGCAGCACTTGCCTACTTATACACAGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TTGAAAATTATTGACATTAAAGGAAAGGGCGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	ATTTAATCTAAAAACTTTCATATTTATTTAGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CACGTGTAACGATAGCACAGTTTCCGTCCTGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CTGCCACCGTAACAACGTTTGAGCCATTAAGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	AATAAACTGTAATACTTCTTTTAGGTCTACGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TATACGACCAAATATTGAAGCAGAACCTTAGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TGACGCTATGGGTTACGAACTTACCCCAATGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GGAAAGATGTTGTTGTATTGCTTGCTGCAGGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CAACAACGTTAAAAAGTGGCAACCCATTTAGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GCCCGTCAAATACTCGGCTTAGCTTATCAAGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CCACTCGAAAAAGGTAGTATCGGACGAAGAGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	AAGCTCAAAGCCTTTACAATGCTGCTATTAGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	AGGGGATTTAATAATGACATACCACTAGGTGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CGATTGTTTTCTCGTCGCCTTTCACGAGTGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GGAAACATAAAACCTAAATTCATATCCTTTGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TGTCAGCCTTTCCGTATTTGTCCTTTGGCAGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TTCTATTTGGTCTGATAATTTAAATTATGGGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GGTTATTCTCTCGACCCTAATTGTCAGAATGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	ATGCCGAAGATGTAAGTAATGGTAGTGCCAGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TAAAAATTTATATTGAAAAGATATGATAAAGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	AAACAGTCTTTGAAAATCTTGTGAAAATGCGTTGTATTTG
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GACTATGGTATCTTCGTTATCGTCTACTTGTTGTATTTA
CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	AACCTCCGAGCACATTACGAAATGCCTACTGTTGTATTT
ACCAATGCAAAGATACCAATTCTAAAGCAATCACAAC

>NC_017861|1|1|247735-249165|PILER-CR
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	AATAAACTGTAATACTTCTTTTAGGTCTAC
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TATACGACCAAATATTGAAGCAGAACCTTA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TGACGCTATGGGTTACGAACTTACCCCAAT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GGAAAGATGTTGTTGTATTGCTTGCTGCAG
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CAACAACGTTAAAAAGTGGCAACCCATTTA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GCCCGTCAAATACTCGGCTTAGCTTATCAA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CCACTCGAAAAAGGTAGTATCGGACGAAGA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	AAGCTCAAAGCCTTTACAATGCTGCTATTA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	AGGGGATTTAATAATGACATACCACTAGGT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	CGATTGTTTTCTCGTCGCCTTTCACGAGT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GGAAACATAAAACCTAAATTCATATCCTTT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TGTCAGCCTTTCCGTATTTGTCCTTTGGCA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TTCTATTTGGTCTGATAATTTAAATTATGG
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GGTTATTCTCTCGACCCTAATTGTCAGAAT
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	ATGCCGAAGATGTAAGTAATGGTAGTGCCA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	TAAAAATTTATATTGAAAAGATATGATAAA
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	AAACAGTCTTTGAAAATCTTGTGAAAATGC
GTTGTATTTGCCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	GACTATGGTATCTTCGTTATCGTCTACTT
GTTGTATTTACCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_017861.1\|WP_014708930.1\|232684_234001_+\|anaerobic-C4-dicarboxylate-transporter	unknown	unknown	gnl\|CDD\|236503
NC_017861.1\|WP_004363736.1\|231870_232332_-\|thioredoxin-dependent-thiol-peroxidase	unknown	unknown	gnl\|CDD\|239315
NC_017861.1\|WP_044048057.1\|258607_259567_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133039
NC_017861.1\|WP_014708929.1\|231074_231860_-\|TIGR02757-family-protein	unknown	unknown	gnl\|CDD\|378237
NC_017861.1\|WP_014708938.1\|249841_251689_+\|phosphoethanolamine-transferase	unknown	unknown	gnl\|CDD\|293741
NC_017861.1\|WP_014708946.1\|259628_261074_-\|lipopolysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|240532
NC_017861.1\|WP_014708947.1\|261116_261722_-\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
NC_017861.1\|WP_004364539.1\|245860_246157_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NC_017861.1\|WP_044047586.1\|234060_235116_+\|L-asparaginase-2	unknown	unknown	gnl\|CDD\|182958
NC_017861.1\|WP_014708935.1\|244876_245809_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NC_017861.1\|WP_014708943.1\|255811_257161_+\|hypothetical-protein	unknown	unknown	unknown
NC_017861.1\|WP_014708933.1\|236821_238246_+\|aspartate-ammonia-lyase	unknown	unknown	gnl\|CDD\|237031
NC_017861.1\|WP_014708941.1\|253883_254762_+\|decaprenyl-phosphate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|260126
NC_017861.1\|WP_014708944.1\|257157_258594_+\|membrane-protein	unknown	unknown	unknown
NC_017861.1\|WP_014708932.1\|235224_236421_+\|porin	unknown	unknown	gnl\|CDD\|369347
NC_017861.1\|WP_014708934.1\|240721_244864_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|375967
NC_017861.1\|WP_004367327.1\|238536_239868_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379049
NC_017861.1\|WP_014708942.1\|254763_255726_+\|HAD-IB-family-phosphatase	unknown	unknown	gnl\|CDD\|378932
NC_017861.1\|WP_014708940.1\|252856_253879_+\|acyltransferase	unknown	unknown	gnl\|CDD\|224748
NC_017861.1\|WP_044048055.1\|251751_252855_+\|acyltransferase	unknown	unknown	gnl\|CDD\|376607

Protein	Function_ID	Function_description	E-value
NC_017861.1\|WP_014708930.1\|232684_234001_+\|anaerobic-C4-dicarboxylate-transporter	gnl\|CDD\|236503	PRK09412, PRK09412, anaerobic C4-dicarboxylate transporter; Reviewed.	1.05083e-176
NC_017861.1\|WP_004363736.1\|231870_232332_-\|thioredoxin-dependent-thiol-peroxidase	gnl\|CDD\|239315	cd03017, PRX_BCP, Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides. The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein, Dot5p (for disrupter of telomere silencing protein 5), which functions as an alkyl-hydroperoxide reductase during post-diauxic growth.	7.99369e-71
NC_017861.1\|WP_044048057.1\|258607_259567_+\|glycosyltransferase	gnl\|CDD\|133039	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	3.08524e-52
NC_017861.1\|WP_014708929.1\|231074_231860_-\|TIGR02757-family-protein	gnl\|CDD\|378237	pfam09674, DUF2400, Protein of unknown function (DUF2400). Members of this uncharacterized protein family are found sporadically, so far only among spirochetes, epsilon and delta proteobacteria, and Bacteroides. The function is unknown and its gene neighborhoods show little conservation.	1.58902e-84
NC_017861.1\|WP_014708938.1\|249841_251689_+\|phosphoethanolamine-transferase	gnl\|CDD\|293741	cd16017, LptA, Lipooligosaccharide Phosphoethanolamine Transferase A (LptA) or Lipid A Phosphoethanolamine Transferase. Lipooligosaccharide Phosphoethanolamine Transferase A (LptA) or Lipid A Phosphoethanolamine Transferase catalyzes the modification of the lipid A headgroups by phosphoethanolamine (PEA) or 4-amino-arabinose residues. Lipopolysaccharides, also called endotoxins, protect bacterial pathogens from antimicrobial peptides and have roles in virulence. The PEA modified lipid A increases resistance to the cationic cyclic polypeptide antibiotic, polymyxin. Lipid A PEA transferases usually consist of a transmembrane domain anchoring the enzyme to the periplasmic face of the cytoplasmic membrane.	2.84753e-68
NC_017861.1\|WP_014708946.1\|259628_261074_-\|lipopolysaccharide-biosynthesis-protein	gnl\|CDD\|240532	cd13127, MATE_tuaB_like, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. This family might function as a translocase for lipopolysaccharides and participate in the biosynthesis of cell wall components such as teichuronic acid. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	2.35092e-110
NC_017861.1\|WP_014708947.1\|261116_261722_-\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	1.78789e-67
NC_017861.1\|WP_004364539.1\|245860_246157_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.62918e-26
NC_017861.1\|WP_044047586.1\|234060_235116_+\|L-asparaginase-2	gnl\|CDD\|182958	PRK11096, ansB, L-asparaginase II; Provisional.	0
NC_017861.1\|WP_014708935.1\|244876_245809_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.21558e-118
NC_017861.1\|WP_014708933.1\|236821_238246_+\|aspartate-ammonia-lyase	gnl\|CDD\|237031	PRK12273, aspA, aspartate ammonia-lyase; Provisional.	0
NC_017861.1\|WP_014708941.1\|253883_254762_+\|decaprenyl-phosphate-phosphoribosyltransferase	gnl\|CDD\|260126	cd13963, PT_UbiA_2, UbiA family of prenyltransferases (PTases), Unknown subgroup. Many characterized members of the UbiA prenyltransferase family are aromatic prenyltransferases and play an important role in the biosynthesis of heme, chlorophyll, vitamin E, and vitamin K. They contain two copies of a motif similar to the active site DxxD motif of trans-prenyltransferases and are potentially related. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways. The function of this subgroup is unknown.	1.24521e-109
NC_017861.1\|WP_014708932.1\|235224_236421_+\|porin	gnl\|CDD\|369347	pfam07396, Porin_O_P, Phosphate-selective porin O and P. This family represents a conserved region approximately 400 residues long within the bacterial phosphate-selective porins O and P. These are anion-specific porins, the binding site of which has a higher affinity for phosphate than chloride ions. Porin O has a higher affinity for polyphosphates, while porin P has a higher affinity for orthophosphate. In P. aeruginosa, porin O was found to be expressed only under phosphate-starvation conditions during the stationary growth phase.	2.8276e-61
NC_017861.1\|WP_014708934.1\|240721_244864_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|375967	pfam18541, RuvC_III, RuvC endonuclease subdomain 3. Cas9 proteins are abundant across the bacterial kingdom, but vary widely in both sequence and size. All known Cas9 enzymes contain an HNH domain that cleaves the DNA strand complementary to the guide RNA sequence (target strand), and a RuvC nuclease domain required for cleaving the noncomplementary strand (non-target strand), yielding double-strand DNA breaks (DSBs). The crystal structures of type II-A and II-C Cas9 proteins highlight the features in Cas9 enzymes that support their function as RNA-guided endonucleases. Cas9 enzymes adopt a bilobed architecture composed of a nuclease lobe containing juxtaposed RuvC and HNH nuclease domains and a variable alpha-helical lobe likely to be involved in nucleic acid binding. The RuvC domain forms the structural core of the nuclease lobe, a six-stranded beta sheet surrounded by four alpha helices, with all three conserved subdomains (I, II, III) contributing catalytic residues to the active site.	1.22992e-48
NC_017861.1\|WP_004367327.1\|238536_239868_+\|ATP-binding-protein	gnl\|CDD\|379049	pfam13173, AAA_14, AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	2.82672e-23
NC_017861.1\|WP_014708942.1\|254763_255726_+\|HAD-IB-family-phosphatase	gnl\|CDD\|378932	pfam12710, HAD, haloacid dehalogenase-like hydrolase.	4.76785e-28
NC_017861.1\|WP_014708940.1\|252856_253879_+\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	7.25746e-18
NC_017861.1\|WP_044048055.1\|251751_252855_+\|acyltransferase	gnl\|CDD\|376607	pfam01757, Acyl_transf_3, Acyltransferase family. This family includes a range of acyltransferase enzymes. This domain is found in many as yet uncharacterized C. elegans proteins and it is approximately 300 amino acids long.	2.89757e-07

>NC_017861.1|WP_004364539.1|245860_246157_+|CRISPR-associated-endonuclease-Cas2
MVFFDLPTDTKKERKAASLFRQNLLKDGFTMFQFSIYIRHCGSKENMEVHIKRVSTFIPAYGKVGIMGITDKQFEEIKLFYGKKPQKPNAPGAQLELF
>NC_017861.1|WP_014708935.1|244876_245809_+|type-II-CRISPR-associated-endonuclease-Cas1
MIKKTLCFSNPAYLSLHNAQLAIRLPEVETCNDLPDSFKKQTERTIPIEDIGVVLLDNKRITITSSALEALIENNCAVITCDSKNMPIGLLLPLCGNTTQSERFRTQIEASLPLKKQLWQQTIKQKISNQAKLLSIYTNTDVGCMYAWADKVRSGDPENLEARAAAYYWKNLFSDIPDFIRGREGEPPNNLLNYGYAILRAVVARSLVASGLLPTLGIHHHNRYNAYCLADDIMEPYRPYVDGLVLDVMASTTDYSELTKEIKMKLLAIPVLDTTIGNKKSPLMIATQQTTSSLYKCFNGEQRRMVYPEL
>NC_017861.1|WP_014708934.1|240721_244864_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKRILGLDLGTTSIGWALVNEAENNNEASSIVRLGVRVNPLTVDEKSNFEKGKAITTNADRQLRHGARINLQRYKLRRQNLHDCLQKQGWLGTEAMYEEGKASTFETYKLRAKAAEEEISLHEFARVLFMLNKKRGYKSNRKANNKEDGQLFDGMTIAKKLYEEHLTPAEYSLQLLNKGKKFTQGYYRSDLNAELERIWDEQKKYYPEILTDEFKQQLEGKTKTNTSKIFLAKYGIYSADLKGLDRKFQPLKWRVEALQQQVDKEVLAFVISDLKGQIANTSGLLGAISDRSKELYFNKQTVGQYLWASLEENPHISIKNKPFYRQDYLDEFEKIWETQAAFHKQLTPELKQEIRDIIIFYQRPLKSKKSLISVCELEQRKVKATIDGKEKEITIGPKVAPKSSPVFQEFRIWQNLNNVLLIDNDTNEKRPLDEVERNLLYKELSIKAKLSKTEALKILNKKGKQWDLNYRELEGNRTQAILFDCYNRIITLTGHEECDFKKIKASEIRHYVSTIFKNLGFSTEILDFDPSLKKHELEKQPMYQLWHLLYSYESDNSRTGNESLLRKLETTFGFPEEYATVLCDVVFEEDYGNLSVKAMREILPYLQAGNDYSQACAYAGYNHSRHSLTKEELDQKVYKERLELLPKNSLRNPVVEKILNQMINVINAIIDEYGKPDEIRIEMARELKSSAADRKKTTHAISQGNAENQRIREILEKEFSLSYISRNDIIKYKLYEELEPNYYKTLYSDTYITKDKLFSKDFDIEHIIPKARLFDDSFSNKTLEARNINLEKSNKTAFDFIKEKYGEDGAEAYKKKLDMLLENDAISRPKYNNLLRAEADIPSDFINRDLRNTQYIAKKACEILGELVKTVTPTTGKITNRLREDWQLVDVMKELNFEKYEKLGLTEIVEDRDGRKIKRIKDWTKRNDHRHHAMDALAIAFTKPSFIQYLNNLNARSNKGDSIYAIENKELHYEEGKLRFNAPIPVNEFRAEAKRHLSAILVSIKAKNKVMTQNVNKIKTKHGIIKKIQLTPRGPLHNETIYGTKMRPIIKMVKVGAALDEATINKVSSPAIREALLKRLNEYSGNAKKAFTGKNTLEKNPIYLNAGRTKTVPSLVKTVEWESFHPTRKLIDKDLNVDKVVDKGIREILKARLEEFNGDAKKAFSNLEENPIYLDEAKKIALKRVSIEGVLSAIPLHTLKNQAGKPITGKDGKPVLGNYVQTSNNHHIAFYYDEDGNLQDNAVSFFEAAERKSQGIPVIDKDYNRDKGWRFLFTMKQNEYFVFPNEATGFIPSEVDLTDEANYGIISPNLYRVQKVSRIDKGTSASRDYWFRHHLETILNDDAKLKNLAFKRIRGLLELKDIIKVRINSTGKIVAVGEYD
>NC_017861.1|WP_004367327.1|238536_239868_+|ATP-binding-protein
MLYRKIEKFIKSHLQSSDDKILLIDGARQIGKSYIIRYVGQKEFSNYIEINMEEDKLGDRLFADVRTVRDFYLTLSINFGNKMGDKHNTLVFIDEIQAYDHLFTLLKFLREDGRFTYIASGSRLGIALKQTSSLPLGSILIKHMYPLDFEEFLIANGVGQIILDTLYDNFAKRKPMPTAIHNKLMSLFRHYLLSGGLPDAVNKFIEEDNIQTTRASQDAVYQNYGIDAAKYEQMTNRRLSIQRIYEMIPSNLEKTKKRIIAKDIEGKTGKRMSNYAEEFEYLIASGIALEVKAISTPTFPLIQNSGKNLLKLYMNDVGLLTSIYYRNNPKAVLDDVPSINLGSVYETVVAQELKAHGFSLYYYDNKQNGEVDFLIDDVEHLSITPIEVKSGKDYKIHSALNKFVSNKHYNIHRAYVLSNEQEVSVADGITYMPIYYIMCFKNE
>NC_017861.1|WP_014708933.1|236821_238246_+|aspartate-ammonia-lyase
MANETNNKEFRIESDLLGELQVPANAYYGVQTQRAVNNYHISGKRMCDYPDYVIAMAYVKLAAVETNRELGEINDEICDAMAQACREIIDGKFHEDFVTDMVQGGAGTSVNMNANEVIANRACEILGHQKGEHKYCAPNDHANCGQSTNDAYPSAIHLALIRMNKTFVEKLAKLVASFRKKAEEFKKDIKMGRTQLQDAVPMTSGQEFNAFANLLEAEIANLNKSAEMFLEINMGGTAIGTGLNAAPGFPEICAKKLSELTGMPFKASEDLVAATPDTTDLVNYSGAMKRLAIKLSKICNDLRLMASGPRCGLHEINLPPMAPGSSIMPGKVNPVIPEITNQTCFKVIGNDTTVTLAAEAGQLQLNVMEPIIMQCLVEDITWLGEAFDTLREKCIDGITVNSEHNAATVKNSIGIVTALNPYIGYKNSTKIAKEALETGGSVYDLVLKNGVLTKEQLDKILSPEHMLDSEEKVK
>NC_017861.1|WP_014708932.1|235224_236421_+|porin
MKKTILLSALLAIATSGMAQDNHSYGAGDGDFKSLSEEVAKLKKHNDMFNVYFNYAASGQISQDANKDWGTRFANKQLRIEIKGNLTDKLYYRLRHRLNKANGAQSEDNFAKATDIMMVGYKFNDKLKIEAGKMCQIWGGFEFDENPMYIYQYSDMVDNMDNFMAGVVLSYKPVPTQELAFEVSDAHNNKFATEYGSNPVSLEKSGVRQLKASRNPLTYIANWNGSFCDNKLLTRWSWGIQTQAEHKYSRMLVLGQQLNLPKMQWYFDYMGAFDGLDRLKIASSEATAVPAHTGESYFSDVHYNSFITKMNWQFAPQWNLMLKGMYETASVTKIEQMKDYRKSYAYMGSIEYYPVKSQDFRIFLAYIGRKYDYSKASGLKDYNTNRIEIGFMYRIKAY
>NC_017861.1|WP_044047586.1|234060_235116_+|L-asparaginase-2
MRRFKISVLLVLTLLVSSVVLAQKPKIRILATGGTIAGVSTSATSSAYGAGQVGVQTLIDAVPQIKDVANVSGEQIVNIGSQDMNDTVWLKLAKRINQLLNEEGYDGVLVTHGTDTMEETAYFLSLTVHSDKPVVLVGSMRPSTAISADGPANLYNGICAVADPSSKGQGVMVCMNNELFEAKSVLKTHTTDCATFKGGIYGEMGYVYNGKPVYLHKPMAKQGLQSEFDVKNLTSLPKVGIVYGYANCSPLPMQAFVDAKYDGIVLAGVGDGNFYKDVFDVALKAVGNGINVVRASRVPFGPTNLNGEVDDAKYHFIASLNLNPQKARVLLMLALTKTKDWQKIQQYFAEY
>NC_017861.1|WP_014708930.1|232684_234001_+|anaerobic-C4-dicarboxylate-transporter
MELIVIAELLVVLAMIFIGARVGGIGLGIYGMIGVFVLVFGFGLKPGSVPIDVMMIIVAVITAAAALQASGGLEYLVGVAAKFLRKHPEQITYFGPLTCWLFCIVAGTAHTSYSLLPIISEIAQANKIRPERPMSLSVIAASLGITGSPVSAANAALISQDILGAKGIELGTILIVCIPASLIAILVAAFIQNRVGKELEDDPEYKRRVAEGIINPEEDKRNLEIAEEQPNPHAKYSVWAFFAGVILVVIFGFFPKLRPEGVTMSQTIEMVMMSIAAVILLVGKAKASDAVNGNIFKAGVNAVVAIFGIAWMGSTFYLGNQEYLNNALSGMISTAPFLFTVALFIMSIMLFSQAATVTTLYPVGVALGINPMFLVAMFPACNGYFFLPNYPTEVAALDFDRTGTTRVGKYVINHSFQLPGFVTTVVSIGVAAIIVQFL
>NC_017861.1|WP_004363736.1|231870_232332_-|thioredoxin-dependent-thiol-peroxidase
MNIGDKAPELLGTDQDGKEIKLSDYKGKKIVLYFYPKDSTPGCTSQACSLRDNYELMQKRGYAVIGVSVQDEKSHKKFIEKYNLPFPLIADVDKTLNETFGVYGEKKMCGRTYMGTYRTTFIINEEGVIEEIFTPKQIKVKEHAEQILKLGAE
>NC_017861.1|WP_014708929.1|231074_231860_-|TIGR02757-family-protein
MKQAQRISKATKEKLVAFAALYENENFLDGDPSWFMHQVDGRQNKEVMAFMAACLSYGSRKVFMPRIQFLLDCAKGNPYEWIVKEGFLRDIPDNSACFYRLYTNHTMHLFFSVLAEMLNHYGCIADYIKHFASKKNGITTDKIEAIVAIEALCAFFAERQVVGIVPKNTSSSCKRICMFLRWLVRNDSPVDLGIWHDFIDKRSLIIPLDTHILQQATHLKLLNTSSATMSVARRLTDALLKVFPDDPLKGDFALFGYGINS
>NC_017861.1|WP_014708938.1|249841_251689_+|phosphoethanolamine-transferase
MNVLSVVSKVLEKVSYPIRGNFCFFFFMYLVGIVVSYAELPANREDASVYGNLWLELFFDLYIVCILLSLIPKRVRRWVVGTFYIIAYATSIADLFCWVKFQSSLNPSMLLLVAETDKREASEFFSSYINSEVLASSVGLLLLIIVMQCLVAVWNIYRKRKGIKYPVQLNILKDKSTHFIGIIALVFFVVSAISSYHNKREMVQMFSLKTIGEVEHELTTPDCATFYTPVYRLVFSLYANHLAAQQIDRLVEAKDRTTVQSCTFDAKNIVLIIGESMGPHHSQQYGYFMNTTPRQVALEKSGLLVPFSDVVAPWNLTSFVFKNIFSMHVVGQRGEWCDYPLFPQLFRKAGYHVSFITNQFLPQAKEAVYDFSGGFFLNHKELSESMFDTRNTRLHTFDDGLLADYDNKLKAENKENNLIIFHLIGSHVSYNRRYPKSRKHFKAADYEQKRPELTKQRRYMLAHYDNAILYNDSIVDQIVKRFANEEAVVIYMPDHGEECFEGNRGIICRNHSAEIDYDLARYEFAVPFWIYCSSKYIEKHPKVFKQIKAVRHKRFMTDALPHLLLHLGGIKAKDYRSEYDILSPQYNEKRPRILKNQTNYDDLVAEHKRKAAMKP
>NC_017861.1|WP_044048055.1|251751_252855_+|acyltransferase
MVDKMLNRTECNILRGVAIVGIVLHNYCHWLRPIVKENEYQFNQHNVDWFNNVMAHGFNERTFFHLLSFFGHYGVPIFLFLSAYGLVMKYEGRKTQSHSDNGNTNEPNALSFLRYHWLKLFRMMIVGFAAFILIDAMTEGQHHYEVMDIVTQMGLFNNLLPNPDDIIWPGPYWFFGLMLQLYIVYRLFLYRKGWTRVVVFIAVCTIIELLCEPNGEPLNRWRYNFVGGMLPFGLGLLYAKYMRSVSLRIYGATFIVSLLLIRFGSSHFFTWLFVPMFVCSASVSFVKLLSYWNTRYPKYTFGITKTFDWLGVISAALFISHPITRKIIIPISRGGDYWTGLLLYIIASICVAWLFKEIMRRVPSPKL
>NC_017861.1|WP_014708940.1|252856_253879_+|acyltransferase
MKRKEIELANISRFRGELMGLAILFVMLFHVGVPRTDMFFGLRRMGNIGVDMFFFLSGVGLWYSWTKNADAMQFLRKRLLRIYPAWFIVASLYYIPDFLSLAWVQHSGHSTNIIDLIGDIAINWDFWLHDELTFWYIPAAMMLYLVTPAYLSLIIKHPTYRWIPALMIAWCVVVQYVLPIHEAVGHIEIFWSRIPIYFIGLNFGAAVKEKRTLEGSSIWLILLTFAGMLATCIYLEQARHGRFPLFLERMLYIPLTITGILLLCIALDRWSGKRLHKALIFVGSISLEIYLLHNHFILIYIEQLGWHYWAKFLATLAIVLPFAWLLHKGVEKITMKIERS
>NC_017861.1|WP_014708941.1|253883_254762_+|decaprenyl-phosphate-phosphoribosyltransferase
MKEIIRLIRPHQWIKNLVVLFPIFFGKALGNIESLYEGCITMIAFSFIASSIYCLNDIVDVADDRRHPKKCNRPLASGKISIAQGYAIMSIMVILSMVSLLFLPQQRIETGGVIGFYWALNVAYCLYLKQHAIIDVCIVAFGFVLRILAGGMATDIRLSKWIVLMTFLLMLFLSFAKRRDDVLRMNETGEAPRKNTIRYNLTFINQAITITASVTLVCYIMYTVSPETIANFHTENLYLTSVFVLLGLLRYIQIAVVDKKSGDPTKVILHDRFIQFIVLGFGLTFLIIIYFL
>NC_017861.1|WP_014708942.1|254763_255726_+|HAD-IB-family-phosphatase
MKVYAFDFDGTLTKKDTFVEFIEFSKGFGKAFWGFFLFSPILVLMKLRLYPNWKAKQRVFSWFFKGMEIDEFNRLCKDFTTEKQSIMRQSGLETIRKALNEGDSVIIITASIENWVKPFFEEFGDKIRVEGTQIDVRLGTITGQFLTKNCYGKEKMKRLKSAFPYRKAYELIAFGDSKGDRYLLKEADKSYYKPFRGRKNENYGEIVRFGIVGVLATALQYGIYLLLIKWIEPRISNTVGYLLSFIFNYIASTKFTFKVKSTAKKGAGFTFAHIINYGLQTVFLTLFLWLGLPKNIAMIPVFGICVPINFILVRLFLKRK
>NC_017861.1|WP_014708943.1|255811_257161_+|hypothetical-protein
MSVFGIFAVKKEERLLAFAMLFVFLAFNTLLISSHFGVYTMGAHGGFWSLFTKNFRMSGYDNWSWITISCMRVHFETIRHPLFLTLLYPLYWLNHWLINAVGINFAVFFMAIIIVFSAFYSVIFTYRILREVLELQRKDATLLTLFLFSFGHILVPAMVPDHFIISLMLLTMTLYIAGTRQKQDKFINVWESFLLIFFTAGMAASNAGKTILAGLFTNGRKFFSFKYLTIGIILPLALLFGIQQMQYYQVEVPQEEVTKKIVSNKKKKQPGKFEAHTKKRNSWLHAHTGQAASSEGIGKLMDISTSRTETLIENFFGEPIQVHQEYLLKDVSWDRPIFVKYSWIVNYIVEALIVLLFVIGIVVGWRYKFMKMLLLWFSCDFTLHIIMGFAINEVYIMTAGWAFIIPISIGYLLRILSRQSRFVLRITLVLLSSWLWVYNGGQIIYYFIA
>NC_017861.1|WP_014708944.1|257157_258594_+|membrane-protein
MNAIVGFLTIKREERLPVGLFFVWQLLLQTLAIVKYVPLFTKPSSNYYKLFVDNYHLSGFDPLTYLVVSDWSLAYDVNRHPLLALFYYPFSLLNQLLIHATGINFSVYIVAVVLIFFSTYGFVLMLRIQRHIIGIASFDSAILAFILYSFSHILLSSIAPDHFVLSLFMLLLTLYIAGKQLQEQKEMSIWQTILLFLLTAGISLNNGLKVFLSNLFTRSKRFFTIKNIFLAIILPAAAIFAIGEWQHEQFIADKVKASKVKKRNAIKAERKAMLAAFRDTTHIKDSAKQEQTFQKMWKVHRKEVLRAEAKLPQKAHSGKPVSNKRFLNWTDVSTSRTETIVENLFGESIQLHQKHTLEDVMKTRPVIVTYDWIANYVVEALIFLLFIVGIWCGRHVKFLWLCLSFAALDIVLHIGLGFGINEVYIMTAHWIYVIPLSIAFFVRNTCGRTRQTLRILLVLLAIYLVVYNVSLLVQYLYF
>NC_017861.1|WP_044048057.1|258607_259567_+|glycosyltransferase
MKASVSIVLCTYNGAKYIREQLDSIIAQTYPLHEIIVQDDHSTDETTEILQEYACKHSLIKVFQNDSAQGVNGNFLSAMQRATGEYIAISDQDDIWETDKIENQINSIGEKLLCSGLSRPFSTDGSFAYFDHRKRNVNVVRMCFLGLPGHTLLFRRELINMLPPLEHSIFKYSMYDAALSITAAAHKNIVFIDKILVNFRRHTAATTYNDYSKSLPSWRNALHILRWGITHFSETRKQVHPLFAAKLSLLNYINANNKEANAAKKILELELQNGILPFMKLQYHCIKNYKYLFHTEGKGFVRLIRAALYPIMQLHMYAK
>NC_017861.1|WP_014708946.1|259628_261074_-|lipopolysaccharide-biosynthesis-protein
MAEQTLKEKTAKGLFWGALNNGTMQILSVPIGILLARLLSNSDYGLMGMLAVFTAVAGALQESGFTSAIANLENPTDNDYNSVFWFSTIVSWCSYIVLFFSAPLIADFFHHPELIDLSRFLFVSLLFSAIGTAPTAYLFKNIMVKETTILRVSSLVVSGIVGIVLALQGYGYWSLAWQQVLYITLTSLGRFFLIPWRPSLKIDFAPVRRMLSFSYKILVTTVVNVISQNLLTFIFGRLYTANAVGNFSQAFKWDTMASTVVSGTTSQVAQPILVEVKAERERQVLVFRKMLRFTAFLAFPAMFGLGMVAYEFIIVFIADKWVDSVPLLRILCISGAFLPFYTLYQNLMISRGKSDVYLWVTTSLVAVQLLLVLLCHSKGMVFMVSAYTVATVLWLFVWQYFAHREISLRLWDVLLDIVPYMLVSAAIMVAVYMATGSINNLIVLLLVRIGLAVVAYFVVMKLLGSKMLDECIGYLRRKKQK
>NC_017861.1|WP_014708947.1|261116_261722_-|nicotinate-nucleotide-adenylyltransferase
MKVGIYGGSFNPIHNGHIKLAEIFLQKACLDEVWFMVSPQNPFKINDKLLDDTLRLQLVRKALNGKKSMVACDYEFRLPKPSYTWDTLQRLSDDFPTYEFVLLIGGDNWLAFDKWYHAEDILANYRVAVYPRKSDETVEKCHTLPSDNVTLLNIPLINISSTDIRLRIKNGHTIKGLVPECIEKDVEKYYNGKYKTYPRIG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	560432-560460	4	0.862
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	MT774383	CrAssphage cr11_1, complete genome	89996-90024	5	0.828
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	NZ_CP012282	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-7, complete sequence	37243-37271	5	0.828
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	NZ_CP014918	Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-3, complete sequence	23458-23486	5	0.828
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	NZ_CP012292	Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-4, complete sequence	37282-37310	5	0.828
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	NC_019145	Staphylococcus aureus plasmid pUR2355, complete sequence	1061-1090	5	0.833
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	NC_019147	Staphylococcus aureus plasmid pUR4128, complete sequence	1061-1090	5	0.833
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	NC_013376	Staphylococcus aureus SK6575 plasmid SAP104B, complete sequence	1070-1099	5	0.833
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	NC_001994	Staphylococcus aureus plasmid pSK3, complete sequence	1315-1344	5	0.833
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	NC_001995	Staphylococcus aureus plasmid pSK6, complete sequence	1209-1238	5	0.833
NC_017861_1	1.20\|247782\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	247782-247811	30	NZ_CP032628	Lactococcus sp. 1JSPR-7 plasmid unnamed1, complete sequence	46974-47003	5	0.833
NC_017861_1	1.35\|248936\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248936-248965	30	NZ_CP054610	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed2, complete sequence	28277-28306	5	0.833
NC_017861_1	1.35\|248936\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248936-248965	30	NZ_AP010873	Candidatus Ishikawaella capsulata Mpkobe plasmid pAst, complete sequence	4333-4362	5	0.833
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	MN692977	Marine virus AFVG_117M37, complete genome	61825-61853	6	0.793
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	MN693220	Marine virus AFVG_25M60, complete genome	349-377	6	0.793
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	NZ_CP047227	Moraxella osloensis strain YV1 plasmid p1, complete sequence	33986-34014	6	0.793
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	AF513032	Staphylococcus phage phi44AHJD, complete genome	237-265	6	0.793
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	NC_004678	Staphylococcus phage 44AHJD, complete genome	237-265	6	0.793
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	MG945128	UNVERIFIED: Microviridae sp. isolate 83-1801, complete genome	5820-5848	6	0.793
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	MG945685	UNVERIFIED: Microviridae sp. isolate 1148-1801, complete genome	5802-5830	6	0.793
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	MT926124	Staphylococcus phage vB_SauP_EBHT, complete genome	131-159	6	0.793
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	NC_004679	Staphylococcus phage phiP68, complete genome	240-268	6	0.793
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	AF513033	Staphylococcus aureus phage phiP68, complete genome	240-268	6	0.793
NC_017861_1	1.2\|246401\|29\|NC_017861\|CRISPRCasFinder	246401-246429	29	JN882284	Cronobacter phage vB_CsaM_GAP31, complete genome	138772-138800	6	0.793
NC_017861_1	1.20\|247782\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	247782-247811	30	KC821624	Cellulophaga phage phi14:2, complete genome	74157-74186	6	0.8
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP015177	Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence	50049-50078	6	0.8
NC_017861_1	1.27\|248321\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248321-248350	30	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	1293777-1293806	6	0.8
NC_017861_1	1.38\|249166\|30\|NC_017861\|CRISPRCasFinder	249166-249195	30	NC_028999	Pseudomonas phage PhiPA3, complete genome	106431-106460	6	0.8
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	MN694048	Marine virus AFVG_250M379, complete genome	40033-40061	7	0.759
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	HQ634156	Vibrio phage PWH3a-P1 genomic sequence	29498-29526	7	0.759
NC_017861_1	1.2\|246401\|29\|NC_017861\|CRISPRCasFinder	246401-246429	29	NZ_MF150536	Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03P plasmid pLd8, complete sequence	29063-29091	7	0.759
NC_017861_1	1.4\|246554\|29\|NC_017861\|CRISPRCasFinder	246554-246582	29	NZ_CP026528	Sinorhizobium meliloti strain AK21 plasmid pSmeAK21a, complete sequence	42197-42225	7	0.759
NC_017861_1	1.10\|247013\|30\|NC_017861\|CRISPRCasFinder	247013-247042	30	NC_011727	Rippkaea orientalis PCC 8801 plasmid pP880103, complete sequence	9882-9911	7	0.767
NC_017861_1	1.14\|247320\|30\|NC_017861\|CRISPRCasFinder	247320-247349	30	MT773556	Myoviridae sp. isolate BML_4 genomic sequence	172534-172563	7	0.767
NC_017861_1	1.15\|247397\|30\|NC_017861\|CRISPRCasFinder	247397-247426	30	KX833905	Lactococcus phage PLg-TB25, complete genome	22972-23001	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	MT210154	Xanthomonas phage PPDBI, complete genome	24556-24585	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	MT119766	Xanthomonas phage PBR31, complete genome	24556-24585	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_KX258624	Bacillus thuringiensis strain INTA Fr7-4 plasmid pFR260, complete sequence	146113-146142	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_KT186230	Bacillus anthracis strain P.NO2 plasmid pXO1, complete sequence	99891-99920	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP040783	Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence	156670-156699	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NC_014331	Bacillus cereus biovar anthracis str. CI plasmid pCI-XO1, complete sequence	100104-100133	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP014283	Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence	348482-348511	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP022045	Bacillus anthracis strain FDAARGOS_341 plasmid unnamed1, complete sequence	36722-36751	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NC_007322	Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, complete sequence	99813-99842	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP031069	Bacillus sp. JAS24-2 plasmid pl626, complete sequence	107315-107344	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP020005	Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence	159095-159124	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP011350	Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence	486425-486454	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NC_012579	Bacillus anthracis str. CDC 684 plasmid pX01, complete sequence	100133-100162	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP015777	Bacillus anthracis strain Tangail-1 plasmid pXO1, complete sequence	99813-99842	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP018904	Bacillus anthracis strain Tyrol 4675 plasmid pXO1, complete sequence	100188-100217	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	516628-516657	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP013056	Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence	125486-125515	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_AP018444	Bacillus anthracis strain CZC5 plasmid pXO1, complete sequence	99898-99927	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NC_012656	Bacillus anthracis str. A0248 plasmid pXO1, complete sequence	100077-100106	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP032614	Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence	37618-37647	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NC_010934	Bacillus cereus strain G9241 plasmid pBCXO1, complete sequence	157908-157937	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP019589	Bacillus anthracis strain SPV842_15 plasmid pX01, complete sequence	99813-99842	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP010853	Bacillus anthracis strain A1144 plasmid pXO1, complete sequence	99794-99823	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP008847	Bacillus anthracis strain HYU01 plasmid pX01, complete sequence	100156-100185	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP006743	Bacillus anthracis str. SVA11 plasmid pXO1, complete sequence	100066-100095	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_AP014834	Bacillus anthracis strain Shikan-NIID plasmid pXO1	99897-99926	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP007513	Bacillus bombysepticus plasmid pBb, complete genome	202186-202215	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP029806	Bacillus anthracis strain London_499 plasmid pX01, complete sequence	98800-98829	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_AP014866	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK2, complete sequence	102953-102982	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP053953	Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence	310378-310407	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP014853	Bacillus thuringiensis strain HD12 plasmid pHD120345, complete sequence	38544-38573	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	CP046512	Bacillus cereus strain JHU plasmid p1, complete sequence	26731-26760	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	CP046513	Bacillus cereus strain JHU plasmid p2, complete sequence	26498-26527	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NC_001496	Bacillus anthracis virulence plasmid PX01, complete sequence	99762-99791	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NC_017726	Bacillus anthracis str. H9401 plasmid BAP1, complete sequence	99866-99895	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP014177	Bacillus anthracis strain Stendal plasmid pXO1, complete sequence	99813-99842	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP009597	Bacillus anthracis str. V770-NP-1R plasmid pXO1, complete sequence	73495-73524	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP009901	Bacillus anthracis strain 2002013094 plasmid pXO1, complete sequence	70995-71024	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP009592	Bacillus cereus G9241 plasmid pBCX01, complete sequence	39278-39307	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP009543	Bacillus anthracis strain BA1015 plasmid pXO1, complete sequence	4707-4736	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP010321	Bacillus anthracis strain Canadian Bison isolate A0369 plasmid 1, complete sequence	168001-168030	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP009330	Bacillus anthracis strain K3 plasmid 1, complete sequence	137689-137718	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP009327	Bacillus anthracis strain Vollum 1B plasmid 1, complete sequence	143627-143656	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP001975	Bacillus anthracis str. A16R plasmid pXO1, complete sequence	99867-99896	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP001971	Bacillus anthracis str. A16 plasmid pXO1, complete sequence	99898-99927	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	416054-416083	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP053950	Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence	204625-204654	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP004876	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence	38912-38941	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NC_017203	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence	74480-74509	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NC_020384	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence	78703-78732	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP023002	Bacillus anthracis strain 14RA5914 plasmid pX01, complete sequence	106182-106211	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP015152	Bacillus thuringiensis strain Bc601 plasmid pBTBC2, complete sequence	77098-77127	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_AP019732	Bacillus anthracis strain PCr plasmid PCr-pXO1	100524-100553	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP029324	Bacillus anthracis strain 17OD930 plasmid pXO1, complete sequence	123972-124001	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP004861	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence	39782-39811	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP007665	Bacillus anthracis str. Vollum plasmid unnamed, complete sequence	102101-102130	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	128596-128625	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP009340	Bacillus anthracis strain Ohio ACB plasmid 1, complete sequence	158871-158900	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP009696	Bacillus anthracis strain RA3 plasmid pXO1, complete sequence	97056-97085	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP009463	Bacillus anthracis strain SK-102 plasmid pXO1, complete sequence	143169-143198	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP009699	Bacillus anthracis strain BA1035 plasmid pXO1, complete sequence	105957-105986	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP009540	Bacillus anthracis str. Sterne plasmid pXO1, complete sequence	75611-75640	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP009324	Bacillus anthracis strain PAK-1 plasmid 1, complete sequence	100242-100271	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP009980	Bacillus anthracis strain Ames isolate BACI008 plasmid unnamed1, complete sequence	7925-7954	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP010091	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence	34055-34084	7	0.767
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP047132	Bacillus anthracis str. BF1 plasmid pXO1, complete sequence	123092-123121	7	0.767
NC_017861_1	1.28\|248398\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248398-248427	30	NZ_CP053838	Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence	133872-133901	7	0.767
NC_017861_1	1.30\|248551\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248551-248580	30	NZ_CP045074	Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence	179562-179591	7	0.767
NC_017861_1	1.32\|248705\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248705-248734	30	MN694669	Marine virus AFVG_250M354, complete genome	19482-19511	7	0.767
NC_017861_1	1.32\|248705\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248705-248734	30	MN693003	Marine virus AFVG_117M79, complete genome	19119-19148	7	0.767
NC_017861_1	1.36\|249013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	249013-249042	30	MK257744	Thermus phage YS40_Isch, complete genome	137746-137775	7	0.767
NC_017861_1	1.37\|249090\|29\|NC_017861\|CRISPRCasFinder,PILER-CR	249090-249118	29	MG592574	Vibrio phage 1.204.O._10N.222.46.F12, partial genome	1125-1153	7	0.759
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	CP002962	Emticicia oligotrophica DSM 17448 plasmid pEMTOL01, complete sequence	64297-64325	8	0.724
NC_017861_1	1.1\|246325\|29\|NC_017861\|CRISPRCasFinder	246325-246353	29	KP703175	ANMV-1 virus from uncultured archaea, genomic sequence	16548-16576	8	0.724
NC_017861_1	1.2\|246401\|29\|NC_017861\|CRISPRCasFinder	246401-246429	29	AP019525	Tenacibaculum phage PTm5 DNA, complete genome	217301-217329	8	0.724
NC_017861_1	1.2\|246401\|29\|NC_017861\|CRISPRCasFinder	246401-246429	29	AP019524	Tenacibaculum phage PTm1 DNA, complete genome	215136-215164	8	0.724
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	NC_029073	Geobacillus virus E3, complete genome	94696-94725	8	0.733
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	NZ_CP051211	Acinetobacter sp. NEB149 plasmid pMsp22, complete sequence	8867-8896	8	0.733
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	MN693353	Marine virus AFVG_25M425, complete genome	18487-18516	8	0.733
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	MK605246	Nodularia phage vB_NspS-kac68v162, complete genome	7339-7368	8	0.733
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	MK605244	Nodularia phage vB_NspS-kac65v162, complete genome	6201-6230	8	0.733
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	MN693547	Marine virus AFVG_25M424, complete genome	12243-12272	8	0.733
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	KU230356	Bacteriophage vB_NpeS-2AV2, complete genome	6038-6067	8	0.733
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	MN693598	Marine virus AFVG_25M403, complete genome	9476-9505	8	0.733
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	MK605242	Nodularia phage vB_NspS-kac65v151, complete genome	6201-6230	8	0.733
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	MN693297	Marine virus AFVG_25M423, complete genome	8337-8366	8	0.733
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	NC_048757	Nodularia phage vB_NspS-kac68v161, complete genome	7339-7368	8	0.733
NC_017861_1	1.17\|247551\|30\|NC_017861\|CRISPRCasFinder	247551-247580	30	MK605243	Nodularia phage vB_NspS-kac65v161, complete genome	6201-6230	8	0.733
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NC_014824	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence	106150-106179	8	0.733
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NC_014824	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence	289696-289725	8	0.733
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NC_014824	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence	84111-84140	8	0.733
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP023246	Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence	74675-74704	8	0.733
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP019232	Bacillus thuringiensis strain YGd22-03 plasmid pYGD36, complete sequence	34291-34320	8	0.733
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NZ_CP042875	Bacillus cereus strain 09 plasmid unnamed1, complete sequence	161633-161662	8	0.733
NC_017861_1	1.30\|248551\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248551-248580	30	NZ_CP030856	Runella sp. HYN0085 plasmid unnamed6, complete sequence	25080-25109	8	0.733
NC_017861_1	1.32\|248705\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248705-248734	30	MN694204	Marine virus AFVG_250M304, complete genome	24666-24695	8	0.733
NC_017861_1	1.34\|248859\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248859-248888	30	NZ_CP009619	Vibrio coralliilyticus strain RE98 plasmid p380, complete sequence	122195-122224	8	0.733
NC_017861_1	1.7\|246783\|30\|NC_017861\|CRISPRCasFinder	246783-246812	30	NZ_LR134433	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 24	283394-283423	9	0.7
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NZ_AP014865	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence	286381-286410	9	0.7
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NC_011785	Borreliella burgdorferi ZS7 plasmid ZS7_lp28-4, complete sequence	24532-24561	9	0.7
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NC_018993	Borrelia burgdorferi 297 plasmid 297_lp28-4, complete sequence	22403-22432	9	0.7
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NC_017407	Borreliella burgdorferi JD1 plasmid JD1 lp28-4, complete sequence	24910-24939	9	0.7
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NC_017416	Borreliella burgdorferi N40 plasmid N40_lp28-4, complete sequence	24190-24219	9	0.7
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NZ_CP031403	Borreliella burgdorferi strain MM1 plasmid plsm_lp28-4, complete sequence	22425-22454	9	0.7
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NC_001854	Borreliella burgdorferi B31 plasmid lp28-4, complete sequence	22423-22452	9	0.7
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NC_001854	Borreliella burgdorferi B31 plasmid lp28-4, complete sequence	23487-23516	9	0.7
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NC_012219	Clostridium botulinum plasmid pC2C203U28 DNA, complete sequence, serotype: type C, strain: (C)-203U28	21625-21654	9	0.7
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NC_015922	Borreliella bissettii DN127 plasmid lp25, complete sequence	5260-5289	9	0.7
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NC_015915	Borreliella bissettii DN127 plasmid lp17, complete sequence	5992-6021	9	0.7
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NZ_CP015803	Borrelia mayonii strain MN14-1539 plasmid lp17	5238-5267	9	0.7
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NZ_CP029459	Clostridium novyi strain 150557 plasmid pCN1, complete sequence	51033-51062	9	0.7
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NZ_CP015788	Borrelia mayonii strain MN14-1420 plasmid lp17, complete sequence	5238-5267	9	0.7
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	530801-530830	9	0.7
NC_017861_1	1.19\|247705\|30\|NC_017861\|CRISPRCasFinder	247705-247734	30	LN890663	Acinetobacter phage vB_AbaS_Loki genome assembly, complete genome: monopartite	9165-9194	9	0.7
NC_017861_1	1.20\|247782\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	247782-247811	30	NZ_LR134110	Enterococcus faecium isolate E6043 plasmid 6	14972-15001	9	0.7
NC_017861_1	1.20\|247782\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	247782-247811	30	NZ_LR135221	Enterococcus faecium isolate E7040 plasmid 3	77614-77643	9	0.7
NC_017861_1	1.23\|248013\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248013-248042	30	NC_014824	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence	202996-203025	9	0.7
NC_017861_1	1.24\|248090\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248090-248119	30	NZ_CP008789	Klebsiella oxytoca KONIH1 plasmid pKOX-137, complete sequence	126945-126974	9	0.7
NC_017861_1	1.24\|248090\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248090-248119	30	LR134252	Klebsiella aerogenes strain NCTC9997 genome assembly, plasmid: 2	233468-233497	9	0.7
NC_017861_1	1.24\|248090\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248090-248119	30	LR134252	Klebsiella aerogenes strain NCTC9997 genome assembly, plasmid: 2	111535-111564	9	0.7
NC_017861_1	1.24\|248090\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248090-248119	30	NZ_LR745047	Klebsiella pneumoniae isolate Kpn2166 plasmid pCTX-M15_Kpn2166	88891-88920	9	0.7
NC_017861_1	1.24\|248090\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248090-248119	30	NZ_CP026276	Klebsiella oxytoca strain KONIH5 plasmid pKOR-ab4d, complete sequence	68063-68092	9	0.7
NC_017861_1	1.24\|248090\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248090-248119	30	NZ_CP026274	Klebsiella oxytoca strain KONIH4 plasmid pKPC-4b66, complete sequence	73149-73178	9	0.7
NC_017861_1	1.24\|248090\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248090-248119	30	NZ_CP028958	Morganella morganii strain AR_0133 plasmid unnamed2, complete sequence	21912-21941	9	0.7
NC_017861_1	1.24\|248090\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248090-248119	30	NZ_CP008842	Klebsiella michiganensis strain M1 plasmid pKOXM1A, complete sequence	162952-162981	9	0.7
NC_017861_1	1.24\|248090\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248090-248119	30	NZ_CP008843	Klebsiella michiganensis strain M1 plasmid pKOXM1B, complete sequence	111245-111274	9	0.7
NC_017861_1	1.24\|248090\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248090-248119	30	NZ_CP042546	Klebsiella michiganensis strain C52 plasmid pC52_001, complete sequence	58781-58810	9	0.7
NC_017861_1	1.28\|248398\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248398-248427	30	AP019525	Tenacibaculum phage PTm5 DNA, complete genome	168491-168520	9	0.7
NC_017861_1	1.28\|248398\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248398-248427	30	AP019524	Tenacibaculum phage PTm1 DNA, complete genome	167432-167461	9	0.7
NC_017861_1	1.30\|248551\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248551-248580	30	NZ_CP023318	Bacillus megaterium strain A plasmid p1, complete sequence	39344-39373	9	0.7
NC_017861_1	1.35\|248936\|30\|NC_017861\|CRISPRCasFinder,PILER-CR	248936-248965	30	LN681539	Clostridium phage phiCD505, complete genome	41496-41525	9	0.7
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	AP011616	Thermus phage phiYS40 DNA, complete genome	15626-15655	10	0.667
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	DQ997624	Thermus thermophilus phage YS40, complete genome	15626-15655	10	0.667
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NC_015937	Thermus phage TMA, complete genome	15528-15557	10	0.667
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	NC_008584	Thermus phage phiYS40, complete genome	15626-15655	10	0.667
NC_017861_1	1.16\|247474\|30\|NC_017861\|CRISPRCasFinder	247474-247503	30	AP011617	Thermus phage TMA DNA, complete genome	15528-15557	10	0.667
NC_017861_1	1.52\|247320\|40\|NC_017861\|CRT	247320-247359	40	KJ451625	Bacillus phage Bcp1, complete genome	66536-66575	10	0.75

1. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 4, identity: 0.862

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
aaaaaatttaaaattatgaaaaattttct	Protospacer
* **************** *** ****.*

2. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to MT774383 (CrAssphage cr11_1, complete genome) position: , mismatch: 5, identity: 0.828

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
ttaaaattttaaattatgaaaacttttaa	Protospacer
 ******** ******** ********

3. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to NZ_CP012282 (Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-7, complete sequence) position: , mismatch: 5, identity: 0.828

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
attggatttaaaattatgtaatctttttt	Protospacer
** ..*************.** *******

4. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to NZ_CP014918 (Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-3, complete sequence) position: , mismatch: 5, identity: 0.828

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
attggatttaaaattatgtaatctttttt	Protospacer
** ..*************.** *******

5. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to NZ_CP012292 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-4, complete sequence) position: , mismatch: 5, identity: 0.828

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
attggatttaaaattatgtaatctttttt	Protospacer
** ..*************.** *******

6. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to NC_019145 (Staphylococcus aureus plasmid pUR2355, complete sequence) position: , mismatch: 5, identity: 0.833

--atttaatctaaaaactttcatatttattta	CRISPR spacer
gaactta--cttaaaactttcatattcattta	Protospacer
  *.***  ** **************.*****

7. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to NC_019147 (Staphylococcus aureus plasmid pUR4128, complete sequence) position: , mismatch: 5, identity: 0.833

--atttaatctaaaaactttcatatttattta	CRISPR spacer
gaactta--cttaaaactttcatattcattta	Protospacer
  *.***  ** **************.*****

8. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to NC_013376 (Staphylococcus aureus SK6575 plasmid SAP104B, complete sequence) position: , mismatch: 5, identity: 0.833

--atttaatctaaaaactttcatatttattta	CRISPR spacer
gaactta--cttaaaactttcatattcattta	Protospacer
  *.***  ** **************.*****

9. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to NC_001994 (Staphylococcus aureus plasmid pSK3, complete sequence) position: , mismatch: 5, identity: 0.833

--atttaatctaaaaactttcatatttattta	CRISPR spacer
gaactta--cttaaaactttcatattcattta	Protospacer
  *.***  ** **************.*****

10. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to NC_001995 (Staphylococcus aureus plasmid pSK6, complete sequence) position: , mismatch: 5, identity: 0.833

--atttaatctaaaaactttcatatttattta	CRISPR spacer
gaactta--cttaaaactttcatattcattta	Protospacer
  *.***  ** **************.*****

11. spacer 1.20|247782|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP032628 (Lactococcus sp. 1JSPR-7 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

aataaactgtaatacttcttttaggtctac---	CRISPR spacer
aataaactgtaccacttctttta---ctacatt	Protospacer
*********** .**********   ****

12. spacer 1.35|248936|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP054610 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.833

taaaaatttatattgaaaagatatgataaa	CRISPR spacer
taaaaacttatattgaaaaaatatgtaaat	Protospacer
******.************.*****  **

13. spacer 1.35|248936|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_AP010873 (Candidatus Ishikawaella capsulata Mpkobe plasmid pAst, complete sequence) position: , mismatch: 5, identity: 0.833

taaaaatttatattgaaaagatatgataaa-	CRISPR spacer
taaatatttatattgaaaaaata-aataatg	Protospacer
**** **************.*** .****

14. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to MN692977 (Marine virus AFVG_117M37, complete genome) position: , mismatch: 6, identity: 0.793

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
aattcatttaaaattttgcaaaatttttt	Protospacer
*    ********** ****** ******

15. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to MN693220 (Marine virus AFVG_25M60, complete genome) position: , mismatch: 6, identity: 0.793

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
aattcatttaaaattttgcaaaatttttt	Protospacer
*    ********** ****** ******

16. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to NZ_CP047227 (Moraxella osloensis strain YV1 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.793

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
gtcacaaataaaattatgcaaacgttttt	Protospacer
.* * *  *************** *****

17. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to AF513032 (Staphylococcus phage phi44AHJD, complete genome) position: , mismatch: 6, identity: 0.793

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
agtagttttaaaattatttaaactttttt	Protospacer
*  *. *********** .**********

18. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to NC_004678 (Staphylococcus phage 44AHJD, complete genome) position: , mismatch: 6, identity: 0.793

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
agtagttttaaaattatttaaactttttt	Protospacer
*  *. *********** .**********

19. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to MG945128 (UNVERIFIED: Microviridae sp. isolate 83-1801, complete genome) position: , mismatch: 6, identity: 0.793

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
ttaaaatttaatattatgcaaatactgtt	Protospacer
 ********** **********. .* **

20. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to MG945685 (UNVERIFIED: Microviridae sp. isolate 1148-1801, complete genome) position: , mismatch: 6, identity: 0.793

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
ttaaaatttaatattatgcaaatactgtt	Protospacer
 ********** **********. .* **

21. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to MT926124 (Staphylococcus phage vB_SauP_EBHT, complete genome) position: , mismatch: 6, identity: 0.793

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
agtagttttaaaattatttaaactttttt	Protospacer
*  *. *********** .**********

22. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to NC_004679 (Staphylococcus phage phiP68, complete genome) position: , mismatch: 6, identity: 0.793

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
agtagttttaaaattatttaaactttttt	Protospacer
*  *. *********** .**********

23. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to AF513033 (Staphylococcus aureus phage phiP68, complete genome) position: , mismatch: 6, identity: 0.793

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
agtagttttaaaattatttaaactttttt	Protospacer
*  *. *********** .**********

24. spacer 1.2|246401|29|NC_017861|CRISPRCasFinder matches to JN882284 (Cronobacter phage vB_CsaM_GAP31, complete genome) position: , mismatch: 6, identity: 0.793

ggacaacttcaaaaagttatctttcagcg	CRISPR spacer
acacaacttcccaaagttatctttcaact	Protospacer
. ********  **************.*

25. spacer 1.20|247782|30|NC_017861|CRISPRCasFinder,PILER-CR matches to KC821624 (Cellulophaga phage phi14:2, complete genome) position: , mismatch: 6, identity: 0.8

aataaactgtaatacttcttttaggtctac	CRISPR spacer
taagaactgtaatacttctattaggtctta	Protospacer
 * .*************** ********

26. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP015177 (Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence) position: , mismatch: 6, identity: 0.8

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgctg	Protospacer
 . **** ******* ************ *

27. spacer 1.27|248321|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 6, identity: 0.8

aagctcaaagcctttacaatgctgctatta	CRISPR spacer
cagctcaaaacctttacaatgcagctgcaa	Protospacer
 ********.************ ***.. *

28. spacer 1.38|249166|30|NC_017861|CRISPRCasFinder matches to NC_028999 (Pseudomonas phage PhiPA3, complete genome) position: , mismatch: 6, identity: 0.8

aacctccgagcacattacgaaatgcctact	CRISPR spacer
accatccgtgcacattacgaaatgcgtgcg	Protospacer
* * **** **************** *.*

29. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to MN694048 (Marine virus AFVG_250M379, complete genome) position: , mismatch: 7, identity: 0.759

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
tgtaaatttaatattattcaaactttctg	Protospacer
   ******** ***** ********.*

30. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to HQ634156 (Vibrio phage PWH3a-P1 genomic sequence) position: , mismatch: 7, identity: 0.759

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
taaaggtttaaaattatgaaaacttttca	Protospacer
  **..************ ********.

31. spacer 1.2|246401|29|NC_017861|CRISPRCasFinder matches to NZ_MF150536 (Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03P plasmid pLd8, complete sequence) position: , mismatch: 7, identity: 0.759

ggacaacttcaaaaagttatctttcagcg	CRISPR spacer
taatctcttcaaaaagttgtttttcagcg	Protospacer
 .*.  ************.*.********

32. spacer 1.4|246554|29|NC_017861|CRISPRCasFinder matches to NZ_CP026528 (Sinorhizobium meliloti strain AK21 plasmid pSmeAK21a, complete sequence) position: , mismatch: 7, identity: 0.759

caaaagcggtcgtaagggcttttatcccg	CRISPR spacer
ggtcggcggtcgcaagggcttttatctcg	Protospacer
 .  .*******.*************.**

33. spacer 1.10|247013|30|NC_017861|CRISPRCasFinder matches to NC_011727 (Rippkaea orientalis PCC 8801 plasmid pP880103, complete sequence) position: , mismatch: 7, identity: 0.767

aggaaagaataaacagtgcttggaaataat	CRISPR spacer
tttcaagaattaacagtgtttggaaatatt	Protospacer
    ****** *******.********* *

34. spacer 1.14|247320|30|NC_017861|CRISPRCasFinder matches to MT773556 (Myoviridae sp. isolate BML_4 genomic sequence) position: , mismatch: 7, identity: 0.767

cacagacacatcaataatagtaactttctc	CRISPR spacer
atctgcctcatcaataataataactttctt	Protospacer
  * * * ***********.*********.

35. spacer 1.15|247397|30|NC_017861|CRISPRCasFinder matches to KX833905 (Lactococcus phage PLg-TB25, complete genome) position: , mismatch: 7, identity: 0.767

gcgggtgcagcacttgcctacttatacaca	CRISPR spacer
gaagcggcagcacttgccaccttatacact	Protospacer
* .*  ************  *********

36. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to MT210154 (Xanthomonas phage PPDBI, complete genome) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
tgaaagatgttgttgtattgtttgaataat	Protospacer
 *******************.***    *

37. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to MT119766 (Xanthomonas phage PBR31, complete genome) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
tgaaagatgttgttgtattgtttgaataat	Protospacer
 *******************.***    *

38. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_KX258624 (Bacillus thuringiensis strain INTA Fr7-4 plasmid pFR260, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

39. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_KT186230 (Bacillus anthracis strain P.NO2 plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

40. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP040783 (Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

41. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NC_014331 (Bacillus cereus biovar anthracis str. CI plasmid pCI-XO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

42. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

43. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP022045 (Bacillus anthracis strain FDAARGOS_341 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

44. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NC_007322 (Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

45. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP031069 (Bacillus sp. JAS24-2 plasmid pl626, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

46. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP020005 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

47. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

48. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NC_012579 (Bacillus anthracis str. CDC 684 plasmid pX01, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

49. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP015777 (Bacillus anthracis strain Tangail-1 plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

50. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP018904 (Bacillus anthracis strain Tyrol 4675 plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

51. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

52. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP013056 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

53. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_AP018444 (Bacillus anthracis strain CZC5 plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

54. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NC_012656 (Bacillus anthracis str. A0248 plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

55. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP032614 (Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

56. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NC_010934 (Bacillus cereus strain G9241 plasmid pBCXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

57. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP019589 (Bacillus anthracis strain SPV842_15 plasmid pX01, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

58. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP010853 (Bacillus anthracis strain A1144 plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

59. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP008847 (Bacillus anthracis strain HYU01 plasmid pX01, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

60. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP006743 (Bacillus anthracis str. SVA11 plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

61. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_AP014834 (Bacillus anthracis strain Shikan-NIID plasmid pXO1) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

62. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP007513 (Bacillus bombysepticus plasmid pBb, complete genome) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

63. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP029806 (Bacillus anthracis strain London_499 plasmid pX01, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

64. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_AP014866 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK2, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

65. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

66. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP014853 (Bacillus thuringiensis strain HD12 plasmid pHD120345, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

67. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to CP046512 (Bacillus cereus strain JHU plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

68. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to CP046513 (Bacillus cereus strain JHU plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

69. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NC_001496 (Bacillus anthracis virulence plasmid PX01, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

70. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NC_017726 (Bacillus anthracis str. H9401 plasmid BAP1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

71. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP014177 (Bacillus anthracis strain Stendal plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

72. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP009597 (Bacillus anthracis str. V770-NP-1R plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

73. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP009901 (Bacillus anthracis strain 2002013094 plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

74. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP009592 (Bacillus cereus G9241 plasmid pBCX01, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

75. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP009543 (Bacillus anthracis strain BA1015 plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

76. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP010321 (Bacillus anthracis strain Canadian Bison isolate A0369 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

77. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP009330 (Bacillus anthracis strain K3 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

78. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP009327 (Bacillus anthracis strain Vollum 1B plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

79. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP001975 (Bacillus anthracis str. A16R plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

80. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP001971 (Bacillus anthracis str. A16 plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

81. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

82. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

83. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP004876 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

84. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NC_017203 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

85. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NC_020384 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

86. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP023002 (Bacillus anthracis strain 14RA5914 plasmid pX01, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

87. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP015152 (Bacillus thuringiensis strain Bc601 plasmid pBTBC2, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

88. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_AP019732 (Bacillus anthracis strain PCr plasmid PCr-pXO1) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

89. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP029324 (Bacillus anthracis strain 17OD930 plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

90. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP004861 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

91. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP007665 (Bacillus anthracis str. Vollum plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

92. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

93. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP009340 (Bacillus anthracis strain Ohio ACB plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

94. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP009696 (Bacillus anthracis strain RA3 plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

95. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP009463 (Bacillus anthracis strain SK-102 plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

96. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP009699 (Bacillus anthracis strain BA1035 plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

97. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP009540 (Bacillus anthracis str. Sterne plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

98. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP009324 (Bacillus anthracis strain PAK-1 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

99. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP009980 (Bacillus anthracis strain Ames isolate BACI008 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

100. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP010091 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttgaattgcttgctgttg	Protospacer
 . **** ******* ***********. *

101. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP047132 (Bacillus anthracis str. BF1 plasmid pXO1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cacaagaagttgttggattgcttgctgttg	Protospacer
 . **** ******* ***********. *

102. spacer 1.28|248398|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP053838 (Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence) position: , mismatch: 7, identity: 0.767

aggggatttaataatgacataccactaggt	CRISPR spacer
attggatttaataataaaataccactttgg	Protospacer
*  ************.* ********  *

103. spacer 1.30|248551|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ggaaacataaaacctaaattcatatccttt	CRISPR spacer
ggaaacataaaacccaaattcgggcgtttt	Protospacer
**************.******. .. .***

104. spacer 1.32|248705|30|NC_017861|CRISPRCasFinder,PILER-CR matches to MN694669 (Marine virus AFVG_250M354, complete genome) position: , mismatch: 7, identity: 0.767

ttctatttggtctgataatttaaattatgg	CRISPR spacer
ttctatttggtctgatatattaactggtat	Protospacer
*****************  **** * .*.

105. spacer 1.32|248705|30|NC_017861|CRISPRCasFinder,PILER-CR matches to MN693003 (Marine virus AFVG_117M79, complete genome) position: , mismatch: 7, identity: 0.767

ttctatttggtctgataatttaaattatgg	CRISPR spacer
ttctatttggtctgatatattaactggtat	Protospacer
*****************  **** * .*.

106. spacer 1.36|249013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to MK257744 (Thermus phage YS40_Isch, complete genome) position: , mismatch: 7, identity: 0.767

aaacagtctttgaaaatcttgtgaaaatgc	CRISPR spacer
aaacagtctttggaaatcttatgtttatta	Protospacer
************.*******.**   **

107. spacer 1.37|249090|29|NC_017861|CRISPRCasFinder,PILER-CR matches to MG592574 (Vibrio phage 1.204.O._10N.222.46.F12, partial genome) position: , mismatch: 7, identity: 0.759

gactatggtatcttcgttatcgtctactt	CRISPR spacer
gactatggtaacttcgttatctacaaacc	Protospacer
********** **********  * * ..

108. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to CP002962 (Emticicia oligotrophica DSM 17448 plasmid pEMTOL01, complete sequence) position: , mismatch: 8, identity: 0.724

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
ataaaacttaaaattatgcaattactgaa	Protospacer
******.************** . .*

109. spacer 1.1|246325|29|NC_017861|CRISPRCasFinder matches to KP703175 (ANMV-1 virus from uncultured archaea, genomic sequence) position: , mismatch: 8, identity: 0.724

ataaaatttaaaattatgcaaactttttt	CRISPR spacer
gtaaaatttaaaactatgcaaagggaagt	Protospacer
.************.********      *

110. spacer 1.2|246401|29|NC_017861|CRISPRCasFinder matches to AP019525 (Tenacibaculum phage PTm5 DNA, complete genome) position: , mismatch: 8, identity: 0.724

ggacaacttcaaaaagttatctttcagcg	CRISPR spacer
attaaacttcataaagttatctttcttct	Protospacer
.   ******* *************  *

111. spacer 1.2|246401|29|NC_017861|CRISPRCasFinder matches to AP019524 (Tenacibaculum phage PTm1 DNA, complete genome) position: , mismatch: 8, identity: 0.724

ggacaacttcaaaaagttatctttcagcg	CRISPR spacer
attaaacttcataaagttatctttcttct	Protospacer
.   ******* *************  *

112. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to NC_029073 (Geobacillus virus E3, complete genome) position: , mismatch: 8, identity: 0.733

atttaatctaaaaactttcatatttattta	CRISPR spacer
gtttaatctaaacactttcattttttgcat	Protospacer
.*********** ******** ***  .

113. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to NZ_CP051211 (Acinetobacter sp. NEB149 plasmid pMsp22, complete sequence) position: , mismatch: 8, identity: 0.733

atttaatctaaaaactttcatatttattta	CRISPR spacer
gaagtagctaataactgtcatatttattta	Protospacer
.    * **** **** *************

114. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to MN693353 (Marine virus AFVG_25M425, complete genome) position: , mismatch: 8, identity: 0.733

atttaatctaaaaactttcatatttattta	CRISPR spacer
ttgtgatctataaactttcatatttagaat	Protospacer
 * *.***** ***************

115. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to MK605246 (Nodularia phage vB_NspS-kac68v162, complete genome) position: , mismatch: 8, identity: 0.733

atttaatctaaaaactttcatatttattta	CRISPR spacer
ggctatattaaaaacttgcatatttatttt	Protospacer
. .**  .********* ***********

116. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to MK605244 (Nodularia phage vB_NspS-kac65v162, complete genome) position: , mismatch: 8, identity: 0.733

atttaatctaaaaactttcatatttattta	CRISPR spacer
ggctatattaaaaacttgcatatttatttt	Protospacer
. .**  .********* ***********

117. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to MN693547 (Marine virus AFVG_25M424, complete genome) position: , mismatch: 8, identity: 0.733

atttaatctaaaaactttcatatttattta	CRISPR spacer
ttgtgatctataaactttcatatttagaat	Protospacer
 * *.***** ***************

118. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to KU230356 (Bacteriophage vB_NpeS-2AV2, complete genome) position: , mismatch: 8, identity: 0.733

atttaatctaaaaactttcatatttattta	CRISPR spacer
ggctatattaaaaacttgcatatttatttt	Protospacer
. .**  .********* ***********

119. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to MN693598 (Marine virus AFVG_25M403, complete genome) position: , mismatch: 8, identity: 0.733

atttaatctaaaaactttcatatttattta	CRISPR spacer
ttgtgatctataaactttcatatttaaaat	Protospacer
 * *.***** ***************

120. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to MK605242 (Nodularia phage vB_NspS-kac65v151, complete genome) position: , mismatch: 8, identity: 0.733

atttaatctaaaaactttcatatttattta	CRISPR spacer
ggctatattaaaaacttgcatatttatttt	Protospacer
. .**  .********* ***********

121. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to MN693297 (Marine virus AFVG_25M423, complete genome) position: , mismatch: 8, identity: 0.733

atttaatctaaaaactttcatatttattta	CRISPR spacer
ttgtgatctataaactttcatatttagaat	Protospacer
 * *.***** ***************

122. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to NC_048757 (Nodularia phage vB_NspS-kac68v161, complete genome) position: , mismatch: 8, identity: 0.733

atttaatctaaaaactttcatatttattta	CRISPR spacer
ggctatattaaaaacttgcatatttatttt	Protospacer
. .**  .********* ***********

123. spacer 1.17|247551|30|NC_017861|CRISPRCasFinder matches to MK605243 (Nodularia phage vB_NspS-kac65v161, complete genome) position: , mismatch: 8, identity: 0.733

atttaatctaaaaactttcatatttattta	CRISPR spacer
ggctatattaaaaacttgcatatttatttt	Protospacer
. .**  .********* ***********

124. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NC_014824 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence) position: , mismatch: 8, identity: 0.733

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
ttaaagatgttgttgtaatgcttgatctta	Protospacer
  *************** ****** * . .

125. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NC_014824 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence) position: , mismatch: 8, identity: 0.733

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
ttaaagatgttgttgtaatgcttgatctta	Protospacer
  *************** ****** * . .

126. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NC_014824 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence) position: , mismatch: 8, identity: 0.733

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
ttaaagatgttgttgtaatgcttgatctta	Protospacer
  *************** ****** * . .

127. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP023246 (Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cactagaagttgttggattgcttgctgttg	Protospacer
 .  *** ******* ***********. *

128. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP019232 (Bacillus thuringiensis strain YGd22-03 plasmid pYGD36, complete sequence) position: , mismatch: 8, identity: 0.733

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
tacgagaagttgttggattgcttgctgttg	Protospacer
 . .*** ******* ***********. *

129. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP042875 (Bacillus cereus strain 09 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
cactagaagttgttggattgcttgctgttg	Protospacer
 .  *** ******* ***********. *

130. spacer 1.30|248551|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP030856 (Runella sp. HYN0085 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.733

ggaaacataaaacctaaattcatatccttt	CRISPR spacer
ataaacataaaacctgaatacatatcgaac	Protospacer
. *************.*** ******   .

131. spacer 1.32|248705|30|NC_017861|CRISPRCasFinder,PILER-CR matches to MN694204 (Marine virus AFVG_250M304, complete genome) position: , mismatch: 8, identity: 0.733

ttctatttggtctgataatttaaattatgg	CRISPR spacer
agctatttggtctgataaattaagtaaatt	Protospacer
  **************** ****.* *

132. spacer 1.34|248859|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP009619 (Vibrio coralliilyticus strain RE98 plasmid p380, complete sequence) position: , mismatch: 8, identity: 0.733

atgccgaagatgtaagtaatggtagtgcca	CRISPR spacer
tgaccgaagatctaagtaaaggtagtctaa	Protospacer
  .******** ******* ****** . *

133. spacer 1.7|246783|30|NC_017861|CRISPRCasFinder matches to NZ_LR134433 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 24) position: , mismatch: 9, identity: 0.7

tttcttcaaataatttcctgtgcctacgtt--------	CRISPR spacer
tttcttcaaataatttact--------gttggaaacaa	Protospacer
**************** **        ***

134. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NZ_AP014865 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence) position: , mismatch: 9, identity: 0.7

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
agacgaataattgacattaaaggaaagatt	Protospacer
  . .*** ******************. .

135. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NC_011785 (Borreliella burgdorferi ZS7 plasmid ZS7_lp28-4, complete sequence) position: , mismatch: 9, identity: 0.7

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
agaaaaaatattgacattaaaagaaattct	Protospacer
  .**** *************.****   .

136. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NC_018993 (Borrelia burgdorferi 297 plasmid 297_lp28-4, complete sequence) position: , mismatch: 9, identity: 0.7

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
agaaaaaatattgacattaaaagaaattct	Protospacer
  .**** *************.****   .

137. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NC_017407 (Borreliella burgdorferi JD1 plasmid JD1 lp28-4, complete sequence) position: , mismatch: 9, identity: 0.7

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
agaaaaaatattgacattaaaagaaattct	Protospacer
  .**** *************.****   .

138. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NC_017416 (Borreliella burgdorferi N40 plasmid N40_lp28-4, complete sequence) position: , mismatch: 9, identity: 0.7

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
agaaaaaatattgacattaaaagaaattct	Protospacer
  .**** *************.****   .

139. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NZ_CP031403 (Borreliella burgdorferi strain MM1 plasmid plsm_lp28-4, complete sequence) position: , mismatch: 9, identity: 0.7

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
agaaaaaatattgacattaaaagaaattct	Protospacer
  .**** *************.****   .

140. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NC_001854 (Borreliella burgdorferi B31 plasmid lp28-4, complete sequence) position: , mismatch: 9, identity: 0.7

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
agaaaaaatattgacattaaaagaaattct	Protospacer
  .**** *************.****   .

141. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NC_001854 (Borreliella burgdorferi B31 plasmid lp28-4, complete sequence) position: , mismatch: 9, identity: 0.7

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
agaaaaaatattgacattaaaagaaattct	Protospacer
  .**** *************.****   .

142. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NC_012219 (Clostridium botulinum plasmid pC2C203U28 DNA, complete sequence, serotype: type C, strain: (C)-203U28) position: , mismatch: 9, identity: 0.7

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
tacggcattatagacattaaaggaaagtat	Protospacer
*  .. ***** *************** ..

143. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NC_015922 (Borreliella bissettii DN127 plasmid lp25, complete sequence) position: , mismatch: 9, identity: 0.7

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
agaaaaaatattgacattaaaagaaattct	Protospacer
  .**** *************.****   .

144. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NC_015915 (Borreliella bissettii DN127 plasmid lp17, complete sequence) position: , mismatch: 9, identity: 0.7

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
agaaaaaatattgacattaaaagaaattct	Protospacer
  .**** *************.****   .

145. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NZ_CP015803 (Borrelia mayonii strain MN14-1539 plasmid lp17) position: , mismatch: 9, identity: 0.7

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
agaaaaaatattgacattaaaagaaattct	Protospacer
  .**** *************.****   .

146. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NZ_CP029459 (Clostridium novyi strain 150557 plasmid pCN1, complete sequence) position: , mismatch: 9, identity: 0.7

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
tacggcattatagacattaaaggaaagtat	Protospacer
*  .. ***** *************** ..

147. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NZ_CP015788 (Borrelia mayonii strain MN14-1420 plasmid lp17, complete sequence) position: , mismatch: 9, identity: 0.7

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
agaaaaaatattgacattaaaagaaattct	Protospacer
  .**** *************.****   .

148. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 9, identity: 0.7

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
gaaaaaattattgaaactaaaggaaattct	Protospacer
  .*********** *.*********   .

149. spacer 1.19|247705|30|NC_017861|CRISPRCasFinder matches to LN890663 (Acinetobacter phage vB_AbaS_Loki genome assembly, complete genome: monopartite) position: , mismatch: 9, identity: 0.7

ctgccaccgtaacaacgtttgagccattaa	CRISPR spacer
agaaatcaataacaacgtttcagccattaa	Protospacer
  .   * .*********** *********

150. spacer 1.20|247782|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_LR134110 (Enterococcus faecium isolate E6043 plasmid 6) position: , mismatch: 9, identity: 0.7

aataaactgtaatacttcttttaggtctac	CRISPR spacer
tttaaactttaatacttcttttaatcatct	Protospacer
  ****** **************. . * .

151. spacer 1.20|247782|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_LR135221 (Enterococcus faecium isolate E7040 plasmid 3) position: , mismatch: 9, identity: 0.7

aataaactgtaatacttcttttaggtctac	CRISPR spacer
tttaaactttaatacttcttttaatcatct	Protospacer
  ****** **************. . * .

152. spacer 1.23|248013|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NC_014824 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence) position: , mismatch: 9, identity: 0.7

ggaaagatgttgttgtattgcttgctgcag	CRISPR spacer
tttaagatgttgttgtaatgcttgatctta	Protospacer
   ************** ****** * . .

153. spacer 1.24|248090|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP008789 (Klebsiella oxytoca KONIH1 plasmid pKOX-137, complete sequence) position: , mismatch: 9, identity: 0.7

caacaacgttaaaaagtggcaacccattta	CRISPR spacer
actcaacgtaaaaaaggggcaacccagcat	Protospacer
   ****** ****** ********* .

154. spacer 1.24|248090|30|NC_017861|CRISPRCasFinder,PILER-CR matches to LR134252 (Klebsiella aerogenes strain NCTC9997 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.7

caacaacgttaaaaagtggcaacccattta	CRISPR spacer
actcaacgtaaaaaaggggcaacccagcat	Protospacer
   ****** ****** ********* .

155. spacer 1.24|248090|30|NC_017861|CRISPRCasFinder,PILER-CR matches to LR134252 (Klebsiella aerogenes strain NCTC9997 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.7

caacaacgttaaaaagtggcaacccattta	CRISPR spacer
actcaacgtaaaaaaggggcaacccagcat	Protospacer
   ****** ****** ********* .

156. spacer 1.24|248090|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_LR745047 (Klebsiella pneumoniae isolate Kpn2166 plasmid pCTX-M15_Kpn2166) position: , mismatch: 9, identity: 0.7

caacaacgttaaaaagtggcaacccattta	CRISPR spacer
actcaacgtaaaaaaggggcaacccagcat	Protospacer
   ****** ****** ********* .

157. spacer 1.24|248090|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP026276 (Klebsiella oxytoca strain KONIH5 plasmid pKOR-ab4d, complete sequence) position: , mismatch: 9, identity: 0.7

caacaacgttaaaaagtggcaacccattta	CRISPR spacer
actcaacgtaaaaaaggggcaacccagcat	Protospacer
   ****** ****** ********* .

158. spacer 1.24|248090|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP026274 (Klebsiella oxytoca strain KONIH4 plasmid pKPC-4b66, complete sequence) position: , mismatch: 9, identity: 0.7

caacaacgttaaaaagtggcaacccattta	CRISPR spacer
actcaacgtaaaaaaggggcaacccagcat	Protospacer
   ****** ****** ********* .

159. spacer 1.24|248090|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP028958 (Morganella morganii strain AR_0133 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

caacaacgttaaaaagtggcaacccattta	CRISPR spacer
actcaacgtaaaaaaggggcaacccagcat	Protospacer
   ****** ****** ********* .

160. spacer 1.24|248090|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP008842 (Klebsiella michiganensis strain M1 plasmid pKOXM1A, complete sequence) position: , mismatch: 9, identity: 0.7

caacaacgttaaaaagtggcaacccattta	CRISPR spacer
actcaacgtaaaaaaggggcaacccagcat	Protospacer
   ****** ****** ********* .

161. spacer 1.24|248090|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP008843 (Klebsiella michiganensis strain M1 plasmid pKOXM1B, complete sequence) position: , mismatch: 9, identity: 0.7

caacaacgttaaaaagtggcaacccattta	CRISPR spacer
actcaacgtaaaaaaggggcaacccagcat	Protospacer
   ****** ****** ********* .

162. spacer 1.24|248090|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP042546 (Klebsiella michiganensis strain C52 plasmid pC52_001, complete sequence) position: , mismatch: 9, identity: 0.7

caacaacgttaaaaagtggcaacccattta	CRISPR spacer
actcaacgtaaaaaaggggcaacccagcat	Protospacer
   ****** ****** ********* .

163. spacer 1.28|248398|30|NC_017861|CRISPRCasFinder,PILER-CR matches to AP019525 (Tenacibaculum phage PTm5 DNA, complete genome) position: , mismatch: 9, identity: 0.7

aggggatttaataatgacataccactaggt	CRISPR spacer
tcagaatttaataataacataccactctca	Protospacer
  .*.**********.**********

164. spacer 1.28|248398|30|NC_017861|CRISPRCasFinder,PILER-CR matches to AP019524 (Tenacibaculum phage PTm1 DNA, complete genome) position: , mismatch: 9, identity: 0.7

aggggatttaataatgacataccactaggt	CRISPR spacer
tcagaatttaataataacataccactctca	Protospacer
  .*.**********.**********

165. spacer 1.30|248551|30|NC_017861|CRISPRCasFinder,PILER-CR matches to NZ_CP023318 (Bacillus megaterium strain A plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.7

ggaaacataaaacctaaattcatatccttt	CRISPR spacer
tcccgactaaaacctaaattactatccttt	Protospacer
    .  *************  ********

166. spacer 1.35|248936|30|NC_017861|CRISPRCasFinder,PILER-CR matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 9, identity: 0.7

taaaaatttatattgaaaagatatgataaa	CRISPR spacer
gagggggatatattgaaaggatatgataat	Protospacer
 *....  **********.**********

167. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to AP011616 (Thermus phage phiYS40 DNA, complete genome) position: , mismatch: 10, identity: 0.667

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
caagaaattattgatattaaaggaagtaaa	Protospacer
. ..**********.**********. ..

168. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to DQ997624 (Thermus thermophilus phage YS40, complete genome) position: , mismatch: 10, identity: 0.667

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
caagaaattattgatattaaaggaagtaaa	Protospacer
. ..**********.**********. ..

169. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NC_015937 (Thermus phage TMA, complete genome) position: , mismatch: 10, identity: 0.667

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
caagaaattattgatattaaaggaagtaaa	Protospacer
. ..**********.**********. ..

170. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to NC_008584 (Thermus phage phiYS40, complete genome) position: , mismatch: 10, identity: 0.667

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
caagaaattattgatattaaaggaagtaaa	Protospacer
. ..**********.**********. ..

171. spacer 1.16|247474|30|NC_017861|CRISPRCasFinder matches to AP011617 (Thermus phage TMA DNA, complete genome) position: , mismatch: 10, identity: 0.667

ttgaaaattattgacattaaaggaaagggc	CRISPR spacer
caagaaattattgatattaaaggaagtaaa	Protospacer
. ..**********.**********. ..

172. spacer 1.52|247320|40|NC_017861|CRT matches to KJ451625 (Bacillus phage Bcp1, complete genome) position: , mismatch: 10, identity: 0.75

cacagacacatcaataatagtaactttctcgttgtatttg	CRISPR spacer
tgtagcagcggcaatagcagtaactttctcgttgtatttg	Protospacer
...**  .*. *****..**********************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

884498 : 935016

unidentified_phage(50.0%)

terminase,transposase,integrase,head

attL 887613:887629|attR 939371:939387

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014709427.1\|884498_885398_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_014709428.1\|886497_886737_+	hypothetical protein	NA	NA	NA	NA
887613:887629	attL	NA	NA	NA	NA
WP_004339081.1\|887772_888144_+	hypothetical protein	NA	NA	NA	NA
WP_014709430.1\|888153_890175_+	hypothetical protein	NA	NA	NA	NA
WP_014709431.1\|890306_891182_+	AAA family ATPase	NA	NA	NA	NA
WP_014709432.1\|891184_891418_+	hypothetical protein	NA	NA	NA	NA
WP_014709433.1\|891414_892050_+	ATPase AAA	NA	NA	NA	NA
WP_014709434.1\|892205_892436_+	hypothetical protein	NA	NA	NA	NA
WP_014709435.1\|892438_893032_+	RpiR family transcriptional regulator	NA	NA	NA	NA
WP_014709436.1\|893043_893343_+	hypothetical protein	NA	NA	NA	NA
WP_044047724.1\|893300_893768_+	hypothetical protein	NA	NA	NA	NA
WP_014709438.1\|893801_894365_+	hypothetical protein	NA	NA	NA	NA
WP_014709439.1\|894687_895245_+	phage morphogeneis protein	NA	NA	NA	NA
WP_014709440.1\|895241_895679_+	hypothetical protein	NA	NA	NA	NA
WP_080574666.1\|895881_897066_-\|head	phage head morphogenesis protein	C9DGN7	Escherichia_phage	1.0e-09	29.5
WP_080574667.1\|897188_898532_-	DUF935 family protein	A0A219VH73	Ochrobactrum_phage	8.0e-11	26.7
WP_014709443.1\|898537_898957_-	DUF1320 domain-containing protein	NA	NA	NA	NA
WP_014709444.1\|898970_899201_-	hypothetical protein	NA	NA	NA	NA
WP_014709445.1\|899275_900838_-	hypothetical protein	H7BVH1	unidentified_phage	2.1e-55	31.1
WP_044047728.1\|900847_901321_-\|terminase	terminase	NA	NA	NA	NA
WP_044047730.1\|901517_902465_+	peptidase	NA	NA	NA	NA
WP_144439203.1\|902511_903564_+	hypothetical protein	NA	NA	NA	NA
WP_044047732.1\|903592_903871_+	hypothetical protein	NA	NA	NA	NA
WP_044048102.1\|903863_904328_+	lysozyme	W8CPL1	Croceibacter_phage	5.3e-39	47.7
WP_014709451.1\|905228_905735_+	hypothetical protein	NA	NA	NA	NA
WP_044048105.1\|906267_906465_+	hypothetical protein	NA	NA	NA	NA
WP_014709454.1\|906464_911102_+	tape measure protein	H7BVG7	unidentified_phage	1.5e-287	45.2
WP_014709455.1\|911103_911568_+	hypothetical protein	NA	NA	NA	NA
WP_014709456.1\|911591_914459_+	hypothetical protein	NA	NA	NA	NA
WP_014709457.1\|914471_915524_+	hypothetical protein	NA	NA	NA	NA
WP_014709458.1\|915590_917270_+	hypothetical protein	NA	NA	NA	NA
WP_144439202.1\|917303_917615_+	hypothetical protein	NA	NA	NA	NA
WP_044047739.1\|917796_918039_+	hypothetical protein	NA	NA	NA	NA
WP_044047741.1\|918108_918939_+	DNA methyltransferase	H7BVG3	unidentified_phage	3.5e-97	64.6
WP_014709463.1\|918964_919603_+	thymidylate synthase	NA	NA	NA	NA
WP_044047742.1\|921999_922230_+	hypothetical protein	NA	NA	NA	NA
WP_014709466.1\|922274_923354_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_044047744.1\|923337_923769_-	hypothetical protein	NA	NA	NA	NA
WP_004373320.1\|924120_924582_-	DUF3408 domain-containing protein	NA	NA	NA	NA
WP_004342100.1\|924586_925549_-	mobilization protein	NA	NA	NA	NA
WP_155115514.1\|925653_925794_-	hypothetical protein	NA	NA	NA	NA
WP_014709470.1\|925729_927166_-	virulence-associated protein E	D3W0G0	Lactococcus_phage	7.5e-15	31.3
WP_014709472.1\|927578_927869_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_044047748.1\|927865_928171_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_014709474.1\|928275_929181_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_014709475.1\|929300_929753_+	cupin domain-containing protein	NA	NA	NA	NA
WP_006949222.1\|929766_930531_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_006949221.1\|930548_931451_+	radical SAM mobile pair protein B	NA	NA	NA	NA
WP_014709477.1\|931671_932076_-	hypothetical protein	NA	NA	NA	NA
WP_014709478.1\|932072_932267_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_044047751.1\|932558_933788_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	9.2e-22	31.6
WP_014709480.1\|933813_935016_+\|integrase	site-specific integrase	NA	NA	NA	NA
939371:939387	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NC_017861.1|WP_014709399.1|842683_843100_-|PcfK-like-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NC_017861.1|WP_014709399.1|842683_843100_-|PcfK-like-protein

842683_843100_-

138 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5815602836879432	1	1.0

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_017860

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_017861

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information