CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NC_017922	Burkholderia sp. KJ006 chromosome 3, complete sequence	1 crisprs	csa3	0	0	1
NC_017920	Burkholderia sp. KJ006 chromosome 1, complete sequence	2 crisprs	cas3,DEDDh,csa3,WYL,DinG	2	3	3
NC_017921	Burkholderia sp. KJ006 chromosome 2, complete sequence	0 crisprs	RT,DEDDh,cas3,csa3,DinG	0	0	2
NC_017923	Burkholderia sp. KJ006 plasmid pKJ006, complete sequence	1 crisprs	NA	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_017922_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017922_1

420699-420786

Orphan

Consensus_repeat	Method
GCCCGACCTGCGACGGCGATGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_017922_1

>merge|NC_017922|1|420699-420786|CRISPRCasFinder
GCCCGACCTGCGACGGCGATGCGGAGCAATTCATGGTGCTGAGGGACTGACGTTGACCACGCGAAGCCCGACCCGCGACGGCGATGCG

>NC_017922|1|1|420699-420786|CRISPRCasFinder
GCCCGACCTGCGACGGCGATGCG	GAGCAATTCATGGTGCTGAGGGACTGACGTTGACCACGCGAA
GCCCGACCCGCGACGGCGATGCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_017922.1\|WP_014725822.1\|430299_431757_+\|nickel-dependent-hydrogenase-large-subunit	unknown	unknown	gnl\|CDD\|380187
NC_017922.1\|WP_014725817.1\|422970_424008_+\|hydrogenase-nickel-incorporation-protein-HypB	unknown	unknown	gnl\|CDD\|182479
NC_017922.1\|WP_011880076.1\|425424_426561_+\|hydrogenase-formation-protein-HypD	unknown	unknown	gnl\|CDD\|237892
NC_017922.1\|WP_011880066.1\|418765_419116_+\|HypC/HybG/HupF-family-hydrogenase-formation-chaperone	unknown	unknown	gnl\|CDD\|376549
NC_017922.1\|WP_011880075.1\|425170_425428_+\|HypC/HybG/HupF-family-hydrogenase-formation-chaperone	unknown	unknown	gnl\|CDD\|376549
NC_017922.1\|WP_014725814.1\|419654_420518_+\|hydrogenase-expression/formation-protein	unknown	unknown	gnl\|CDD\|377409
NC_017922.1\|WP_014725821.1\|429253_430291_+\|Uptake-hydrogenase-small-subunit-precursor	unknown	unknown	gnl\|CDD\|224654
NC_017922.1\|WP_011880077.1\|426557_427634_+\|hydrogenase-expression/formation-protein-HypE	unknown	unknown	gnl\|CDD\|100033
NC_017922.1\|WP_014725808.1\|410894_412505_-\|carbamoyltransferase	unknown	unknown	gnl\|CDD\|225103
NC_017922.1\|WP_011880064.1\|417379_418090_+\|Ni/Fe-hydrogenase,-b-type-cytochrome-subunit	unknown	unknown	gnl\|CDD\|273985
NC_017922.1\|WP_014725813.1\|419112_419637_+\|hydrogenase	unknown	unknown	gnl\|CDD\|239263
NC_017922.1\|WP_041494438.1\|414273_415347_+\|hydrogenase-small-subunit	unknown	unknown	gnl\|CDD\|224654
NC_017922.1\|WP_014725818.1\|424004_425180_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223146
NC_017922.1\|WP_045579647.1\|427754_429257_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NC_017922.1\|WP_014725812.1\|418097_418775_+\|HyaD/HybD-family-hydrogenase-maturation-endopeptidase	unknown	unknown	gnl\|CDD\|129246
NC_017922.1\|WP_011880072.1\|422593_422941_+\|hydrogenase-maturation-nickel-metallochaperone-HypA	unknown	unknown	gnl\|CDD\|376468
NC_017922.1\|WP_014725809.1\|412536_413604_-\|HoxN/HupN/NixA-family-nickel/cobalt-transporter	unknown	unknown	gnl\|CDD\|225911
NC_017922.1\|WP_014725816.1\|421292_422606_+\|hydrogenase-maturation-factor-HoxV/HupK	unknown	unknown	gnl\|CDD\|380187
NC_017922.1\|WP_011880063.1\|415404_417261_+\|nickel-dependent-hydrogenase-large-subunit	unknown	unknown	gnl\|CDD\|366057
NC_017922.1\|WP_034192890.1\|410503_410860_+\|acyl-carrier-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_017922.1\|WP_014725822.1\|430299_431757_+\|nickel-dependent-hydrogenase-large-subunit	gnl\|CDD\|380187	NF033181, NiFeSe_hydrog, nickel-dependent hydrogenase large subunit. Members of this family are the large subunit of the periplasmic nickel-dependent hydrogenase. Some members contain a selenocysteine residue.	5.2366e-129
NC_017922.1\|WP_014725817.1\|422970_424008_+\|hydrogenase-nickel-incorporation-protein-HypB	gnl\|CDD\|182479	PRK10463, PRK10463, hydrogenase nickel incorporation protein HypB; Provisional.	3.5066e-128
NC_017922.1\|WP_011880076.1\|425424_426561_+\|hydrogenase-formation-protein-HypD	gnl\|CDD\|237892	PRK15062, PRK15062, hydrogenase isoenzymes formation protein HypD; Provisional.	0
NC_017922.1\|WP_011880066.1\|418765_419116_+\|HypC/HybG/HupF-family-hydrogenase-formation-chaperone	gnl\|CDD\|376549	pfam01455, HupF_HypC, HupF/HypC family.	4.81381e-21
NC_017922.1\|WP_011880075.1\|425170_425428_+\|HypC/HybG/HupF-family-hydrogenase-formation-chaperone	gnl\|CDD\|376549	pfam01455, HupF_HypC, HupF/HypC family.	5.78658e-32
NC_017922.1\|WP_014725814.1\|419654_420518_+\|hydrogenase-expression/formation-protein	gnl\|CDD\|377409	pfam04809, HupH_C, HupH hydrogenase expression protein, C-terminal conserved region. This family represents a C-terminal conserved region found in these bacterial proteins necessary for hydrogenase synthesis. Their precise function is unknown.	1.28175e-49
NC_017922.1\|WP_014725821.1\|429253_430291_+\|Uptake-hydrogenase-small-subunit-precursor	gnl\|CDD\|224654	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion].	2.88599e-67
NC_017922.1\|WP_011880077.1\|426557_427634_+\|hydrogenase-expression/formation-protein-HypE	gnl\|CDD\|100033	cd02197, HypE, HypE (Hydrogenase expression/formation protein). HypE is involved in Ni-Fe hydrogenase biosynthesis. HypE dehydrates its own carbamoyl moiety in an ATP-dependent process to yield the enzyme thiocyanate. The N-terminal domain of HypE is related to the ATP-binding domains of the AIR synthases, selenophosphate synthetase (SelD), and FGAM synthase and is thought to bind ATP.	9.76796e-174
NC_017922.1\|WP_014725808.1\|410894_412505_-\|carbamoyltransferase	gnl\|CDD\|225103	COG2192, COG2192, Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones].	1.17682e-131
NC_017922.1\|WP_011880064.1\|417379_418090_+\|Ni/Fe-hydrogenase,-b-type-cytochrome-subunit	gnl\|CDD\|273985	TIGR02125, CytB-hydogenase, Ni/Fe-hydrogenase, b-type cytochrome subunit. This model describes a family of cytochrome b proteins which appear to be specific for nickel-iron hydrogenase complexes. Every genome which contains a member of this family posesses a Ni/Fe hydrogenase according to Genome Properties (GenProp0177), and most are gene clustered with other hydrogenase components. Some Ni/Fe hydrogenase-containing species lack a member of this family but contain other CytB homologs (pfam01292) which may substitute for it.	6.27348e-76
NC_017922.1\|WP_014725813.1\|419112_419637_+\|hydrogenase	gnl\|CDD\|239263	cd02965, HyaE, HyaE family; HyaE is also called HupG and HoxO. They are proteins serving a critical role in the assembly of multimeric [NiFe] hydrogenases, the enzymes that catalyze the oxidation of molecular hydrogen to enable microorganisms to utilize hydrogen as the sole energy source. The E. coli HyaE protein is a chaperone that specifically interacts with the twin-arginine translocation (Tat) signal peptide of the [NiFe] hydrogenase-1 beta subunit precursor. Tat signal peptides target precursor proteins to the Tat protein export system, which facilitates the transport of fully folded proteins across the inner membrane. HyaE may be involved in regulating the traffic of [NiFe] hydrogenase-1 on the Tat transport pathway.	1.06479e-47
NC_017922.1\|WP_041494438.1\|414273_415347_+\|hydrogenase-small-subunit	gnl\|CDD\|224654	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion].	0
NC_017922.1\|WP_014725818.1\|424004_425180_+\|hypothetical-protein	gnl\|CDD\|223146	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones].	4.82685e-77
NC_017922.1\|WP_045579647.1\|427754_429257_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	3.27058e-150
NC_017922.1\|WP_014725812.1\|418097_418775_+\|HyaD/HybD-family-hydrogenase-maturation-endopeptidase	gnl\|CDD\|129246	TIGR00140, Hydrogenase_expression/formation_protein_HupD, hydrogenase expression/formation protein. valid names: hupD, hynC, hoxM. C at 64 and 67 are believed to be metal binding. Postulated to be involved in processing or hydrogenase. Superfamily suggests that it is a peptidase/protease. [Protein fate, Protein modification and repair].	4.13993e-68
NC_017922.1\|WP_011880072.1\|422593_422941_+\|hydrogenase-maturation-nickel-metallochaperone-HypA	gnl\|CDD\|376468	pfam01155, HypA, Hydrogenase/urease nickel incorporation, metallochaperone, hypA. HypA is a metallochaperone that binds nickel to bring it safely to its target. The targets for Hypa are the nickel-containing enzymes [Ni,Fe]-hydrogenase and urease. The nickel coordinates with four nitrogens within the protein. The four conserved cysteines towards the C-terminus bind one zinc moiety probably to stabilize the protein fold.	3.26172e-39
NC_017922.1\|WP_014725809.1\|412536_413604_-\|HoxN/HupN/NixA-family-nickel/cobalt-transporter	gnl\|CDD\|225911	COG3376, HoxN, High-affinity nickel permease [Inorganic ion transport and metabolism].	1.5366e-125
NC_017922.1\|WP_014725816.1\|421292_422606_+\|hydrogenase-maturation-factor-HoxV/HupK	gnl\|CDD\|380187	NF033181, NiFeSe_hydrog, nickel-dependent hydrogenase large subunit. Members of this family are the large subunit of the periplasmic nickel-dependent hydrogenase. Some members contain a selenocysteine residue.	1.36192e-05
NC_017922.1\|WP_011880063.1\|415404_417261_+\|nickel-dependent-hydrogenase-large-subunit	gnl\|CDD\|366057	pfam00374, NiFeSe_Hases, Nickel-dependent hydrogenase.	0

>NC_017922.1|WP_014725814.1|419654_420518_+|hydrogenase-expression/formation-protein
MQMKTFPVPVVPFGPGSQPEGDAVLDYMPMPQAMHTFVAPSLPERADARALDVVRGILLTVLDALDACRRGEQPAPIDLTACDADALRILNAVLGEGEVSARIDTADAGSVLIQETVFAGVWRIAEDGPAGRAERIEVGGAPAALAAAAHAAAAPELPASDAHPSGVMNAPAILTEVRDQVARWRAGAAPHVINLTLLPLSSEDGAFIDAVLGGGPVSVLSRGYGNCRIASTGVVHCWRIAYFNSQDTLILNTIEITDLPEIVQAAPEDIDDSHERLAQLIDWVEEA
>NC_017922.1|WP_014725813.1|419112_419637_+|hydrogenase
MSETSGSVPGATQAEVPNVPSAAAAGQDCPAVVQRLIEQAHATFVDEHTLDGWLADGGECVVLLMGDPVRFPESLDVAAVLPELAHVAAVRFGRALRLAVATRAGENAIARRFGSLRWPALLWLRDGQYVTVLSGMMDWDDYVKCVADALASPTTRAPSIGIPVNVAGGSSGCH
>NC_017922.1|WP_011880066.1|418765_419116_+|HypC/HybG/HupF-family-hydrogenase-formation-chaperone
MCIGLPMQVVDAQPGHAWCVGRGVRRRVDTALVGPCAPGDWLLVFLDAARERLDAARAAEIDATLALIESVMAGEGGAASPAAFALPSALGVDELNRLVGGPQRAAGSLAVPEESK
>NC_017922.1|WP_014725812.1|418097_418775_+|HyaD/HybD-family-hydrogenase-maturation-endopeptidase
MDTSPQTIPSAQDGAAIVALGIGNVLWADEGFGVRCIEALQQRFECAPNVTLMDGGTQGLYLIQHVQAADFLLIFDAVDYGLAPGELKIVEDDEVPKFLGVRKMSLHQTGFQEVLMLAQLTGKYPRRVVLIGCQPEEIEDYGGSLRPCVKAALERALDAGVAYLREWGGAPLPRRTALRDDEAVTLHHLALARYEGERPSEADACRIGDERVLVRALAKEPPSCA
>NC_017922.1|WP_011880064.1|417379_418090_+|Ni/Fe-hydrogenase,-b-type-cytochrome-subunit
MTMQTQSRRGRAPDTVPAAKAIYVYEAPVRIWHWMNAASIAVLSITGYLIGSPLATQPGEASAHFLMGYIRFAHFAAAYLFAVGLAGRAYWALVGNHHAREMFWVPVFTRDYWLDVFGMLRYYMFLGPCPRQYSGHNPLSRFAMFFVFLTVSLFMVVTGFALYGEGAQAGSWQQRTFGWIRPLLGQSQGVHTWHHLGMWAILLFVILHVYAAIREDIMGRQSVVGSMISGYRTFKD
>NC_017922.1|WP_011880063.1|415404_417261_+|nickel-dependent-hydrogenase-large-subunit
MTAYSTQGFQLDNSGRRIVVDPVTRIEGHMRVEVNVDSNNVIRNAVSTGTMWRGLEVILKGRDPRDAWAFVERICGVCTGCHALASVRAVEDALDIRIPPNAHLIREIMAKTLQVHDHAVHFYHLHALDWVDVVSALKADPKLTSELQQRVSPSHPMSSPGYFRDIQTRLRKFVESGQLGPFMNGYWGNPAYLLPPEANLMAVTHYLEALDLQKEWVKIHTIFGGKNPHPNYLVGGVPCAINIDGDLAAGAPINMERLNFVRSLIDQAETFCRNVYVPDLLAIGTIYKARGWLHGGGLAATNVMDYGTYPLVNYDPSTNQMPGGAILNGDWDNILPVDARDPEQVQEFVTHSWYQYPDNDRGLHPWDGMTEPHYELGPNTKGTRTAIESVDESAKYSWVKAPRWRGHAMEVGPLARYILGYAHAKQGNPHGARIKEQIDAALQSVNQDMPKLLGLPETTLGAKQLLPTTIGRTLARALEAQYCAEMMSDDWQRLVDNIRNGDTSTANVEKWDPSTWPAEAKGVGTVAAPRGALGHWIKIKDGRIENYQCVVPSTWNGGPRDAKGQIGAFEASLMNTPMANPEQPVEILRSLHSFDPCMACSTHVMSEDGAEMTTVTVR
>NC_017922.1|WP_041494438.1|414273_415347_+|hydrogenase-small-subunit
METFYEVMRRQGISRRSFLKFCSLTATSLGLGPAFMPRIVEAMETKPRTPVLWLHGLECTCCSESFIRSAHPLAKDVVLSMISLDYDDLLMASAGHQAEAILEEVMTKYKGNYILAVEGNPPLNQDGMSCIIGGKPFVDQLRRVSKDAKAVISWGSCASWGCVQAAKPNPTQAVPIHKVITDKPIIKVPGCPPIAEVMTGVITYMLTFDRVPELDRQGRPKMFYSQRIHDKCYRRPHFDAGQFVEAWDDDAARRGCCLYKVGCKGPTTYNACSTVRWNGGTSFPIQAGHGCIGCSEDGFWDKGSFYDRLTHINQFGVEANADKIGGTAAVVLGAAAAAHAAASAIQRVSSKRDRDGR
>NC_017922.1|WP_014725809.1|412536_413604_-|HoxN/HupN/NixA-family-nickel/cobalt-transporter
MTAPVLPGAGVRASGARGKLVLLLAALAAFNLAAWGWAVAVFGGQPTLMGACVLAYTFGLRHAVDADHIAAIDNVTRKLMHEGRRPLTVGLMFSLGHSTIVIVASAAIAAAAFGLRERLAAFHDIAGTIGTLVSTTFLLAIAVANLVTLHSVVRTLRRVKRGERYADAHADTALHHHGFLARLLRPVLRMVTKSWHMYVLGALFGLGFDTATEIGVLGISATSAAHGMSAWSIMVFPALFTASMSLVDTADSMLMLGVYGWAFREPVRKLYYNVGITALSAAVALLIGCVEGFALLGDTFGIRGAFRDVFDALNAHLGALGYAIVVLCAASWFVCAAIYRFRRGSFAPLAEHDHG
>NC_017922.1|WP_014725808.1|410894_412505_-|carbamoyltransferase
MSHRIPPAHADGVLGVQTGPAPNTGAAWVATAAGARRIAHAGQERFDRIKQSCAYPAAAVDACRIALDLPADARPSLVACVDTGQAAPLPPYVDTVPQLRVEHALCHAAAGYYCSPFDEAAILVVDGHRREQGATPSSHSVWIGWNGRIEPVMRSASCGIGALYEAVTVAIGFGAHETGKTMGLAPYGDDAAAPDLGGRLDGLAVDYGARCDADGARLFGLSPLAGATDDASLTARAALARAAQRECERAMLHLARAVREMTGIRRLCLAGEVSLNGRANDLVWRDAGFDAVFAGPAGADCGTALGAALWGYHGVQGVPFRPGPFSPYGGRPYSEADVDAALAALPDRARYRDTRGTIDELAERTAALLAAGQCVALHAGRAEMGPRALGNRSLLMSPAHADARDRMNLRVKRREAFRPFAPCVPVEDAARYFELDTPSPYMLRICAVRPQWRARLAAITHVDGTARPQTVSPQDNPHLHRLLRAFERVAGIPVLLNTSFNVAGEPLVETPADALRGFARNDIDALWIGDRLLEKR
>NC_017922.1|WP_034192890.1|410503_410860_+|acyl-carrier-protein
MNQDIKRIVAQILRLSGPDQVADSASLFRELNMSPIDYVALCDALHTKVDHRVNLDNLWPFDHMLLDPQWHTGTEWTDAGWKQVCDLMNWPARDKCGAQNLDEHFSVNYIGRRIAQFG
>NC_017922.1|WP_014725816.1|421292_422606_+|hydrogenase-maturation-factor-HoxV/HupK
MTGGASTSEDTSGFAALAGRYVVRPGRSPSIDGGRPPLAGLLLAGQPAALAAPRLSAVFSLCGRAHALCAELAVTAARAYANAGGAAGDCGGEGDGDRNGAGDDDGAGCGNGEGDGKGNVDRNGAGDDHDAGRGEGERDGEDARSATLARETIAEHLRRIWLDWPARLVGGVPCALPDVRAAGTREWIERHVLGEPADGWLARWDQDPRACLAAWTARATSFPASLLLHCRTVADALRMPPRALRIDGADRARLRRIGAAIAGDPRFAQRPEQDGAPAETGVWTRCGDPHAAAYDSAWLRLGARVAELARLAAGGPAAFALRSGALALAPGEALAWCETARGVLIHWVRLVPGDAARVADYRVVSPTEWNFHPDGTLAHALARVDVRPDGGGDAALAARVGALMGAFDPCIAYALETAAPVRRDDDHTNGNRSTCMK
>NC_017922.1|WP_011880072.1|422593_422941_+|hydrogenase-maturation-nickel-metallochaperone-HypA
MHEVSLAGGVLAAVEAAAARERFARVNVLRLEVGRLAGVEVDALRFALDAMAPGTCLAGARIEIAEPPGRAWCLNCHCDVPLAARGEPCGRCGGYWLQPNGGTELRIVDMLVDDA
>NC_017922.1|WP_014725817.1|422970_424008_+|hydrogenase-nickel-incorporation-protein-HypB
MCVVCGCDSPDGAHRDRHDAHHAHHDAQAHVRADAASGDLHYGLGPAGVTVHGLDQGRTVRIEQDVLGENDRHAAHNRRHFAAHGVRALNLVSSPGSGKTTLLCATIAALRARAPALPIAVIEGDQQTANDAERIRAAGAPAIQVNTGKGCHLDAAMVAAAYERLPLHAHGHDHGHAHGHGHEHHHHDHDHHHPHDAHASSERRGAAQQPDSVLFIENVGNLVCPALWDLGEDAKVAILSVTEGEDKPLKYPDMFAAARLMIVNKTDLLPYVQFDVERCIEYARRINPALDVICVSATTGDGIDAWLDWVLRTGDARDPLAARIGELEAELAALRAQQRRAGDAA
>NC_017922.1|WP_014725818.1|424004_425180_+|hypothetical-protein
MTLRRERLPRAWGADTVLATGAWLKNAACVYLDGDVYWSPLHGDLDDPRHCVALEASVASLVDAARQAGRPVRAIAHDLHPDFHSSRLAVEWSERLGVPAIAVQHHHAHIGAVAAEHGLAEPVVGLALDGVGLGTDGAAWGGELLEVAPDGWRRLGHLTPLALPGGDVAAREPWRMAAAALHTLGRADEIEARLGGDVGTRAARTIGTMLARGLNCPPSTGAGRWFDAAAGLLGICRHQRTEAEAAIALERHAADYLRDHPEPDTDGLWRIADDGELDLRPLLVRVLELADAGASAQGAALFHLALADALAAWAAAAAHGRAVLLGGGCFANRLLSARLRAALDARGVRSCAPSSVPCGDAGLALGQAWVAAHTLTSGAVRATSEGVSTCV
>NC_017922.1|WP_011880075.1|425170_425428_+|HypC/HybG/HupF-family-hydrogenase-formation-chaperone
MCLAIPARVVELRDADMGVVDLGGVRKTISLALVPDARLGEYVIVHVGYALGRIDPDEAERTLALFGELAHAAGDGDVHPSGAPQ
>NC_017922.1|WP_011880076.1|425424_426561_+|hydrogenase-formation-protein-HypD
MKYIDEFRDRALAERISARIQAEAQPGTRYHFMEFCGGHTHAISRYGVTDLLPDNVRMIHGPGCPVCVLPVGRIDLAVQLALERGVIVCTYGDTMRVPASGGMSLMRAKAHGADIRMVYSPLDALKIARLNPDREVVFFAIGFETTTPPTALIVRDAAAAGVDNFSVLCCHVLTPAAITHLLAAPAVAADAVPLDGFIGPAHVSIVIGSAPYEGFARDYRKPVVIAGFEPLDVMQAILMLIRQVNDGRAEVENEFSRAVTRAGNAAAQALMDDVFEARESFEWRGLGEVPASALRIRAKYARHDAEARYGLVYRPVADHRKCECGAILRGLKQPRDCSLFGTVCTPENPMGSCMVSSEGACAAHYSYGRFKDIPLVPA
>NC_017922.1|WP_011880077.1|426557_427634_+|hydrogenase-expression/formation-protein-HypE
MSSTPTPRTKPAYVRPLNFRDGRIDMGHGAGGRASAQLIRELFVAAFDNEWLRQGNDQAAFAPPATAPGERVVMATDAHVVSPLFFPGGDIGSLAVHGTVNDVAMSGARPLYLAASFIIEEGFALADLKRIVESMANASRECGVPIVTGDTKVVERGKGDGVFITTTGVGVVPAGIRIDGALARPGDAVLLSGTIGEHGVAIMSTREALEFDVEISSDSAALHTLVASMLAAVPGVRVLRDPTRGGLATTLNEIASQSGVGMLIREDAIPVLPQVDAACELLGLDPLYVANEGKLVAVCAAEDAPALLAAMRAHPLGAHAVQIGEVTEDAHGFVQVETKFGGRRIADWLSGEQLPRIC
>NC_017922.1|WP_045579647.1|427754_429257_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MSSPLPVHPSTDPEPDPAPLRRPPTVLVVDDELRAQETIRRVLDEEFEVLTASSADEARAILQQQPVAVILCDQRMPGRTGVEFLSEVRETWPDTVRIIVSGYTDSEDIVAGINQAGIHRFVLKPWMPDHLLHTVRQAAEAQSLQQDMHRLDLELRNSVPLLRQRSHEKLAQVQNTLGFDAIVRAPGSPLDPICKLASKLARYDLSILILGESGTGKEMLARAIHYASPRAAGPFVVENCAAVADTLLESELFGHKRGAFTGAVHDHAGLFQRANGGTIFLDEIGDTSLAFQVRLLRVLQEGEVRPVGATRAVPVDVRVIAATHRDLEREVEAGRFREDLYYRIATATLALPPLRERSGDLVPIAHRLLQAIAEHESRPAGLDFARDALAVLLGYAWPGNIRELRNEIYRAVALSDDDLIRADAFSPKVLRGQSGPAARGPEAQIASAGTLQERLDAMETMLIKEALLRHRWNKTRAASELGLSRAGLRQKMQRFGLEKK
>NC_017922.1|WP_014725821.1|429253_430291_+|Uptake-hydrogenase-small-subunit-precursor
MSVDTRAPDGTGAFNVLWLQSGGCGGCNMSLLCADTPDFSGMLSRAGIRLLWHPSLSLETGADARDVLQACLDGTVELHALCVEGAMLRGPNGTGRFHVLAGTGVPMIDWVARLASVAHYTVAIGTCAAYGGITAAGANPADACGLQYDGDQPGGLLGVAYRSRSGFPVVNVAGCPTHPDWVVETLSALSMSLLDPAALDTLGRPRFYADQLVHHGCTRNEFYEYKASAVRPSDLGCMMEHMGCKGTQAHADCNTRLWNGDGSCTRGGYACINCTEPGFEEPGHAFHHTPNVAGIPIGLPSDMPKAWFVALASLSKAATPKRVRENATADHLKVAPAVRSRPRNK
>NC_017922.1|WP_014725822.1|430299_431757_+|nickel-dependent-hydrogenase-large-subunit
MSRLVIGPFNRVEGDLEVRIEVVDGRVSDAHVNATMFRGFEQILLDRDPLDALVYVPRICGICSVSQGVAAARALADLAGVTPAPNGQIATNLMLAAENLADHLSHFYLFFMPDFVRPVYAARAWHAEAVSCFTPYQGERHRASLAARQRWLRLMGTLGGKWPHTGSIQPGGSARAIDNAERIRLLGFIGEFRQFLEEVLFDAPLEEIAQLDSEVALAAWRARGERRGDLRFFLTLADDLGLDRLGAGPGLYLSYGAYPQPDGAHAFRGGVWDAQRKQADALDLDAITEDATHAWLDDAGGARHPFAGLTEPRADKPGAYTWNKAPRLNGAVLETGAIARQLADGHPLIADAVARCGGSVYTRVLARLLELARVVPMMEQWVRALAPGMPYCAAFALPDEGRAVGLNEAARGSLGHWLAVKDGRIANYQIIAPTSWNFSPRDAGGRPGALEAALIGAPVEPGETTPVAVQHIVRSFDPCMVCTVH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

770900 : 805601

Leptospira_phage(50.0%)

plate,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014726078.1\|770900_772721_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_014726079.1\|776359_777709_-	hypothetical protein	NA	NA	NA	NA
WP_083854929.1\|777711_777972_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_148278614.1\|777968_778337_-	hypothetical protein	NA	NA	NA	NA
WP_148278615.1\|778665_779202_-	hypothetical protein	NA	NA	NA	NA
WP_014726082.1\|784127_784478_+\|transposase	transposase	S5WIU1	Leptospira_phage	5.3e-07	45.8
WP_158333106.1\|784456_784615_+\|transposase	transposase	NA	NA	NA	NA
WP_014726083.1\|784631_785162_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_148278616.1\|785243_786374_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_014726085.1\|786337_788152_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_014726086.1\|788163_789744_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_041494391.1\|789740_793304_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_059463257.1\|793300_794539_-	hypothetical protein	NA	NA	NA	NA
WP_081053530.1\|794542_794800_-	PAAR domain-containing protein	A4PE23	Ralstonia_virus	1.9e-06	42.5
WP_148278617.1\|795414_796185_-	hypothetical protein	NA	NA	NA	NA
WP_014726090.1\|799112_801452_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_014726091.1\|801535_803068_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_014726092.1\|803141_803654_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_014726093.1\|804248_805601_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_017920

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_017920_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017920_1

1476570-1476642

Orphan

Consensus_repeat	Method
CTCTCACCCCATGCTTCGCGGTCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_017920_1

>merge|NC_017920|1|1476570-1476642|CRISPRCasFinder
CTCTCACCCCATGCTTCGCGGTCGGCGAGCGTCAGCGCTTCATCGCCTACTCTCGCCCCATGCTTCGCGGTCG

>NC_017920|1|1|1476570-1476642|CRISPRCasFinder
CTCTCACCCCATGCTTCGCGGTCG	GCGAGCGTCAGCGCTTCATCGCCTA
CTCTCGCCCCATGCTTCGCGGTCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_017920.1\|WP_014722947.1\|1472639_1473215_-\|RNA-chaperone-Hfq	unknown	unknown	gnl\|CDD\|212463
NC_017920.1\|WP_011884651.1\|1480637_1482356_+\|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl\|CDD\|223732
NC_017920.1\|WP_011884649.1\|1479972_1480599_+\|chromosome-partitioning-protein-ParB	unknown	unknown	gnl\|CDD\|378068
NC_017920.1\|WP_011884626.1\|1467086_1467929_+\|pilus-assembly-protein	unknown	unknown	gnl\|CDD\|227343
NC_017920.1\|WP_011884628.1\|1467949_1468279_+\|DUF3613-domain-containing-protein	unknown	unknown	gnl\|CDD\|289069
NC_017920.1\|WP_011884656.1\|1488807_1491291_+\|ribonuclease-R	unknown	unknown	gnl\|CDD\|273947
NC_017920.1\|WP_041493958.1\|1479318_1479861_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NC_017920.1\|WP_011884635.1\|1471851_1472556_+\|DUF2968-domain-containing-protein	unknown	unknown	gnl\|CDD\|378583
NC_017920.1\|WP_014722950.1\|1473821_1474742_-\|DUF1571-domain-containing-protein	unknown	unknown	gnl\|CDD\|377879
NC_017920.1\|WP_011884653.1\|1483672_1484710_-\|ribose-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226633
NC_017920.1\|WP_011884625.1\|1466075_1467068_+\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|224975
NC_017920.1\|WP_014722951.1\|1474769_1476524_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|236359
NC_017920.1\|WP_011884652.1\|1482645_1483590_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380544
NC_017920.1\|WP_014722954.1\|1477829_1479050_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|273324
NC_017920.1\|WP_011884633.1\|1470405_1471797_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NC_017920.1\|WP_041493956.1\|1468373_1470296_+\|membrane-protein	unknown	unknown	gnl\|CDD\|227002
NC_017920.1\|WP_014722957.1\|1484748_1486302_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NC_017920.1\|WP_041493957.1\|1473509_1473791_+\|PXPV-repeat-protein	unknown	unknown	gnl\|CDD\|372309
NC_017920.1\|WP_014722958.1\|1486288_1487536_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NC_017920.1\|WP_011884645.1\|1476794_1477613_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380065

Protein	Function_ID	Function_description	E-value
NC_017920.1\|WP_014722947.1\|1472639_1473215_-\|RNA-chaperone-Hfq	gnl\|CDD\|212463	cd01716, Hfq, bacterial Hfq-like. Hfq, an abundant, ubiquitous RNA-binding protein, functions as a pleiotropic regulator of RNA metabolism in prokaryotes, required for transcription of some transcripts and degradation of others. Hfq binds small RNA molecules called riboregulators that modulate the stability or translation efficiency of RNA transcripts. Hfq binds preferentially to unstructured A/U-rich RNA sequences and is similar to the eukaryotic Sm proteins in both sequence and structure. Hfq forms a homo-hexameric ring similar to the heptameric ring of the Sm proteins.	2.9836e-30
NC_017920.1\|WP_011884651.1\|1480637_1482356_+\|SulP-family-inorganic-anion-transporter	gnl\|CDD\|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	1.25089e-115
NC_017920.1\|WP_011884649.1\|1479972_1480599_+\|chromosome-partitioning-protein-ParB	gnl\|CDD\|378068	pfam08857, ParBc_2, Putative ParB-like nuclease. This domain is probably distantly related to pfam02195. Suggesting these uncharacterized proteins have a nuclease function.	9.58383e-76
NC_017920.1\|WP_011884626.1\|1467086_1467929_+\|pilus-assembly-protein	gnl\|CDD\|227343	COG5010, TadD, Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion].	2.4985e-19
NC_017920.1\|WP_011884628.1\|1467949_1468279_+\|DUF3613-domain-containing-protein	gnl\|CDD\|289069	pfam12266, DUF3613, Protein of unknown function (DUF3613). This family of proteins is found in bacteria. Proteins in this family are typically between 94 and 126 amino acids in length.	2.36803e-12
NC_017920.1\|WP_011884656.1\|1488807_1491291_+\|ribonuclease-R	gnl\|CDD\|273947	TIGR02063, Ribonuclease_R, ribonuclease R. This family consists of an exoribonuclease, ribonuclease R, also called VacB. It is one of the eight exoribonucleases reported in E. coli and is broadly distributed throughout the bacteria. In E. coli, double mutants of this protein and polynucleotide phosphorylase are not viable. Scoring between trusted and noise cutoffs to the model are shorter, divergent forms from the Chlamydiae, and divergent forms from the Campylobacterales (including Helicobacter pylori) and Leptospira interrogans. [Transcription, Degradation of RNA].	0
NC_017920.1\|WP_041493958.1\|1479318_1479861_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	2.43487e-35
NC_017920.1\|WP_011884635.1\|1471851_1472556_+\|DUF2968-domain-containing-protein	gnl\|CDD\|378583	pfam11180, DUF2968, Protein of unknown function (DUF2968). This family of proteins has no known function.	8.77535e-63
NC_017920.1\|WP_014722950.1\|1473821_1474742_-\|DUF1571-domain-containing-protein	gnl\|CDD\|377879	pfam07608, DUF1571, Protein of unknown function (DUF1571). A family of paralogous proteins in Rhodopirellula baltica.	2.42178e-77
NC_017920.1\|WP_011884653.1\|1483672_1484710_-\|ribose-ABC-transporter-permease	gnl\|CDD\|226633	COG4158, COG4158, Predicted ABC-type sugar transport system, permease component [General function prediction only].	2.12107e-126
NC_017920.1\|WP_011884625.1\|1466075_1467068_+\|type-II-secretion-system-F-family-protein	gnl\|CDD\|224975	COG2064, TadC, Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion].	2.56766e-13
NC_017920.1\|WP_014722951.1\|1474769_1476524_-\|AMP-binding-protein	gnl\|CDD\|236359	PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase FadD.	0
NC_017920.1\|WP_011884652.1\|1482645_1483590_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380544	cd06321, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily, which consist of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.	3.40433e-132
NC_017920.1\|WP_014722954.1\|1477829_1479050_-\|MFS-transporter	gnl\|CDD\|273324	TIGR00891, Carboxylic_acid_transporter_protein_homolog, putative sialic acid transporter. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	3.10706e-108
NC_017920.1\|WP_011884633.1\|1470405_1471797_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	1.60405e-101
NC_017920.1\|WP_041493956.1\|1468373_1470296_+\|membrane-protein	gnl\|CDD\|227002	COG4655, COG4655, Predicted membrane protein [Function unknown].	1.30444e-26
NC_017920.1\|WP_014722957.1\|1484748_1486302_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NC_017920.1\|WP_041493957.1\|1473509_1473791_+\|PXPV-repeat-protein	gnl\|CDD\|372309	pfam12778, PXPV, PXPV repeat (3 copies). This short repeat is found in multiple copies in a variety of Burkholderia proteins. The function of this region is unknown.	0.00458669
NC_017920.1\|WP_014722958.1\|1486288_1487536_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	1.16741e-42
NC_017920.1\|WP_011884645.1\|1476794_1477613_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|380065	pfam17939, TetR_C_30, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in the Pseudomonas aeruginosa PsrA which regulates the fadBA5 beta-oxidation operon. Functional analysis of PsrA indicated its importance in regulating b-oxidative enzymes. It has also been suggested that PsrA, a member of the TetR family of repressors, could affect global gene expression including activation of rpoS.	1.14228e-22

>NC_017920.1|WP_014722951.1|1474769_1476524_-|AMP-binding-protein
MSAPAATATAQLPPATDGIWYKSYPRGVPHEIDVAQYTSLVQFFDECTTRFAERVAYVSAGASMTYRTLAQKVDAFASYLQSIGVKPGDRVAIMLPNTFQYPVALFGTLKAGAIVVNVNPLYTARELAHQLKDSGAQTIVVFENFARTLQDALPDTQVKNIVVTALGDLLADGLNAKGHLINFVLKHVKKLVPPYNLPQAVRLRSALALGARTKPQPARVTRDDLAFLQYTGGTTGVAKGAMLTHGNLIANLLQAKAWIADQVSGDVETVLTPLPLYHIYSLTVNAFIFMGLGGRNILIANPRDMTMVMKIIRNETFTGITGINTLYNAFLDNEEFRKRDFSKLKLAMAGGMAMQRAVAERFEEVTGRPVVEGYGLTECSPIVTMNPVDLSDMAAFSGSVGLPAPSTQVRFRREDGTWAGIGEPGELCVRGPQVMRGYWQRPDETAKVLDADGWLGTGDIGVMDEHGFIRLIDRKKDMILVSGFNVYPNEIEEVLVMHPGISEAAAIGIPDEVHGERIKVFVVRRDPALTVDDVLAHCRKNLTGYKMPKSVEFRDALPQTNVGKILRRALRDEELAKLEAAKQR
>NC_017920.1|WP_014722950.1|1473821_1474742_-|DUF1571-domain-containing-protein
MNPRTMRRAAHAAAAVACMLTLAPPPHAQETAAAAASAPTATATTLPAELDKVTHEPAAQQARWLRAAAQRGTLAQLDDATLTALFNALDPLAVPLYVGHGPNGYPSYQFTMARQERINGKWPDTPDRMLVKTTREPLRVYAKWLPGGAHAGQETIYDTTLRKDEMYGHLGGLLGKIPLWTALDGALARAQSNHQVKDLGTEFIANLYLSEARKYQEAGVQRPTHVEAKTIGGVRVVALTYETPTGRPQFYAKKEVLGLDLHAPYFRTVESYDNDGRIFERIVIETIAPATLDASAFDPKNPDYAF
>NC_017920.1|WP_041493957.1|1473509_1473791_+|PXPV-repeat-protein
MNKRGLAVWIGGAALVASGSAMAGHVDLSVGIGVPVAPVYVEPAPVYVAPQPAVVAYPGYGYGYYGDDDDDGYRKWRKHYYKHWRKHHDDDDD
>NC_017920.1|WP_014722947.1|1472639_1473215_-|RNA-chaperone-Hfq
MANPAESHPQNDFINSARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKRAISTIQLDTGGSRPGGPRGPRPGGRPGGREGGGHSPYGSHGGSRESRGDGGYGSREPREGYGSREPREGYGSREPREGYGAPREGYGAPRESYGAPRDTSDAPGSSAPSDSRGGTGPVIVTRRRRIVPDGQ
>NC_017920.1|WP_011884635.1|1471851_1472556_+|DUF2968-domain-containing-protein
MSHITGLGRACVLFAMMGGMQGVYAQGLAADAASAVQQASAPVAAIPALDPQVQSVQPQAGETTGQSTVDELQRQMQAHALTEMRTNYNGSYGASLLFNVKDGAYFVALFQQKAFWRVIKTHDDARAEAIYRDFSHQAARLAVNELRAAKLEAQKAQTDRQIQATQDRARRLQADLSIAHEQQAAVADHQKNVRDETAALQTQQAQLQGQLRALQKQVRALQREANAGLPSTAH
>NC_017920.1|WP_011884633.1|1470405_1471797_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MRNTPAIAELDLYVWEGKADIVDRVARCMASFDVEVIRADNAEISPERAALRPSLAIISVTMIETGAAFLRDWQANIGMPVVWVGAARDHDASQYPPDYSHILPLDFTCAELRGMVGKLVTQLRAHAAETLQPSELVAHSESMQALLHEVDTFADCDTNVLLHGETGVGKERIAQLLHEKHSRYRHGEFVPVNCGAIPDGLFESLFFGHAKGSFTGAVVAHKGYFEQAAGGTLFLDEVGDLPLYQQVKLLRVLEDGAVLRVGATTPVKVDFRLVAASNKKLPQLVKDGLFRADLYYRLAVIELSIPSLEERGAVDKIALFKSFVADVVGEARLAELSDLPYWLADAVADSYFPGNVRELRNLAERVGVTVRQTGGWDAARLQRLIAHARNSAQPVPAESAAEVFVDRSKWDMNERSRVIAALDANGWRRQDTAQQLGISRKVLWEKMRKYQIFDEEPETRESD
>NC_017920.1|WP_041493956.1|1468373_1470296_+|membrane-protein
MAAIWLSVAVIVLSGIDIGRFYSERRHMQAAADLAALSSVMKASADSTCTAAKTAAQQVANPTANAVPANATLSVTCGVWTAPQSSSGSALFTPTAGDPTAGQCGGLQAGTANGQSANAVCVTVSEPVIGFFRSGTTISASAIAKSTPTDTFTLSSSLASLNGGLANQLLQLLTGSPNALTLNAVDYQGLAQVNLKLAGILANLPVGSSTSVLNGTVTLGQLANAMIQAATQQNVASVKLNVLNAITAGLCSAGACGGPTIALNQLVSVATATGSSAVDASVNAFGLLSTALQVANGTNAVSIPSIMVQTPTALAPLLNATVTGSVALTGMPPSTASGPPGPSNCGTSDCVTNTSTAQGNVFLNMSISLLSTCSNGSLVFPGGTCPSGKATPLAAVQLPVTAYVAPATAGLASVTCSANGTKSATVNVQTGLLAVYLGGSANTPINLKAPSGYTASGSATPITLVSVNLQSLLNLLNLGGLISGLTTLVDVLTLGALDLTEISVNINLTPGQLTIPVANQSPTPLVFTYPGTPSSPYTLSAGTDQLLSPTVQSALNSGLSVQLTANGGLLKLLGDVTTPILNVVLGPLLSALGSTLVPMLLQPVDSLLTSVTGLLGLSLGNAYVTNTPDSIKCGNPMLVQ
>NC_017920.1|WP_011884628.1|1467949_1468279_+|DUF3613-domain-containing-protein
MNNNRHRNMWSGRHAALAAIACITLGPVGAHAQQQDAAPDASVVGRSTRDWLTLQAQNRAAAPTQPLLGDVASLVYQRYLDSFKNKIPESMSTQLGASGGMSGSGQGAQ
>NC_017920.1|WP_011884626.1|1467086_1467929_+|pilus-assembly-protein
MKRIGRMAKQVGMATMALMLVACATKESGYGVGAQTERAALIQAADQKQAVPDTPGMYLGLIQRMQTQGLYYASLAHIDAYDKTYGVSPDTILLRADALRMTDQPAASAAAYAQLLKTPLAARGYRGLGLIAGAAGDFGRAVEALTQAADLAPTDASLLSDLAYAKLRNGDVVGARVPLMKAAELDQRNPKIVSNLALYLLAAGRTQDAQRLMNQQRMPAGIRKDISSDAAKIAAAARAQQRAVATPPVVSRRAATAPITPMANNVGYDQTVPLLQRFAQ
>NC_017920.1|WP_011884625.1|1466075_1467068_+|type-II-secretion-system-F-family-protein
MTAAQIGSIALALGALGVLLLGMAALLRASAASRAERALADALERRMAALEAARTRTAPDDGAGTQQVARGRERIERMLSRLAAAGMRLLDTGFGKHIVAEEDRRLLEQCGYVDARTRGLFLSARLVCGITVPLLFAILASGRMKGGYWTIGMFAAFSVGFMLPKLYVQRRAAARRQSVIDELPLFVDMLRLLQGVGLSLDQSLQVVTNDFRGMMPVLSSEVGIAQRQFAAGRTRDQSMQRLSSGFDNEDLRAIARLMVQVDKHGGAVQEPLKQFGDRLRETRRAMLRDRIGRLTVKMTGVMVVTLLPALLIVTAGPGLLAVMRALAVHH
>NC_017920.1|WP_011884645.1|1476794_1477613_-|TetR-family-transcriptional-regulator
MAVTQEGRPSTGRPSGTRPSGTRQSGGTKVRILDAAEDLFIEHGFEAMSMRQITSRAAVNLAAVNYHFGSKEALIHAMLSRRLDQLNQERLGILDRFDAQLGTHITCEHVLGAMFIPALKASRDPERGGPAFLRLIGRAYTDPSPFVRNFLTAHYASVAGRFFDAFQRALPHLPRTELGWRLHFAIGALSGALAGAETESLIDEFSQRRTMNDVQMIARLSSLIVAALKAPMPDSAQLAIFAAVLDDAGASEALGMPSAAAAVDTAAAHSAG
>NC_017920.1|WP_014722954.1|1477829_1479050_-|MFS-transporter
MSWTREQRNVTIAAYLGWTLDAFDFFLMVFVLKDIAAEFATTIPAVAFALTLTLAMRPLGALIFGRLADRFGRRPTLMVNIACYSLLELASGFAPSLTALLALRALFGVAMGGEWGVGSALTMETVPTHARGIVSGLLQAGYPSGYLLASVVFGLFYQYIGWRGMFMVGVLPALLVLYVRAHVPESPAWKQMEKRTRPSLAATFRHNWKLAIYAIVLMTAFNFFSHGTQDLYPTFLREQHHFDPHTVSWITIVLNLGAIVGGLSFGAISERIGRRRAIFIAALIALPVLPLWAFSSGPLALAAGAFLMQISVQGAWGVIPVHLNEISPDEIRATFPGFVYQLGNLLASGNATMQASLAVSHGNDYAFALALVAGIVAVAIAVLILFSRERRGIDMTQSVNTRTGAG
>NC_017920.1|WP_041493958.1|1479318_1479861_+|GNAT-family-N-acetyltransferase
MAESPDPALPVLQTERLWLRPRVLADLDACIEMDRDPEVTRYIAGPWHDPAEHRRFVTHRITRDYPAGLGYWSIFEKAAPDRFIGWVLLIPDYAGGARDVEIGWRLVRAAWGRGIASEAAAAVVRHAFDTVRLPRVIADIAAANTGSLNVARKLGMRRVGVVDDGISYVRHRLERDDLRT
>NC_017920.1|WP_011884649.1|1479972_1480599_+|chromosome-partitioning-protein-ParB
MALGNDVHLIPVRLDALRPTQMTVGYREVKAKRKHWKTLGKRARQAAIESHWFPAVLGPGGLHYITDHHHLGLALIEEGETRVNAMLLKDLSWLDDTIFWRIMEHNQWVHPFGPDGARREYAHLPQALTGLEDDPYRSLAGELRTAGGYAKDATPFSEFLWADYLRQHVSLDQIRKNFDKALDLSLRRAHDQDARYLPGWSGVIAVKP
>NC_017920.1|WP_011884651.1|1480637_1482356_+|SulP-family-inorganic-anion-transporter
MTTTQTRPEAGPQRAEHFAALDAAAPSPPRRVGLDALAGLSIAGLLIPEAVAYAGLANLPPQAGLIALLSGLVIYALTGSSRFAIVSSTSSSAAVLAATVLSESGLALAAQLALAAALVTVTGVLFILSGAARLGGMSDFVARPVLRGFTFGLALTIVIKQLPKILAVSVRHGDAPHVVLELVRGAPQANLASVALGAAALALLFALGRRSRVPATLVVIVLSIVAGYLVDWQRYGIAVVGHIDFRHIEFGLPRLDRNAWMQTVELAFALMLILYAESYGSIRNFALKHGDSVSANRDLVAIGCANLVSGLLHGMPVGAGYSATAANEAAGAQSRFAGLWAAAVVALIVGLLLPQLARTPEPVLAAIVIFAVSHSLHPSIFRPYWVWHRDRLVVIAALLAVLVLGVLHGLLVAIGVNLLLTLRKLSEPNVSVLGRLRDGHDFVDVANHADAKPVPGVLIVRPEAQLFFANADRMLNRVRALMKDAPDAHTVMLSLEETPDVDGTTIESLRTFAAECAARGLRLAIVRLKAHALNALRRAADDTLRDDAMSELSVDESLQLLQARGRDGASGG
>NC_017920.1|WP_011884652.1|1482645_1483590_-|ABC-transporter-substrate-binding-protein
MFKHQAALTAVACALAFGTAAAHAADKPLKSIGVTVGSLGNPYFVTIVKGAEARAKQINPNAKVTAVSADYDLNKQFTQIDNFISAHVDMILLNATDPKAIEPAVKKAQAAGITVVAVDVAAAGANATVQTNNVKAGELACDYLAKKLNGKGNVIIENGPQVSAVIDRVNGCKAVLAKNPGIKLLSSDQDGKGSREGGMNAMQGYLTRFPKLDGVFTINDPQAIGSDLAAKQLNRPNIVITSVDGAPDIEVALKSNTLVQASSSQDPWAMAQQAVNVGYGIMNGQKPANPMILIEPTLVTRDNVKGYKGWTSPR
>NC_017920.1|WP_011884653.1|1483672_1484710_-|ribose-ABC-transporter-permease
MINQPKQRNLASAAAQPVATRTPLLRGADHRARMQSLLRTAGMLPVLLVLCIGFGFLTDGFFTLQNLSIVTQQASINIVLAAGMTFVILTGGIDLSVGSVLAASAVAALLASTIPGWGWLGVPIALAVGLAFGAINGGLISFLRLPPFIVTLGAMTAVRGVARLIGNDTTIFNPQLPFAFIGNGTVLGVPWLVVIACAVIALSWFILRRTVLGMRIYSVGGNPEAARLSGINVRAIQLFVYAASGLLAGLGAVMSAARLYAANGLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDIWQYIIKGLVIIGAVALDRYRQRDSART
>NC_017920.1|WP_014722957.1|1484748_1486302_-|sugar-ABC-transporter-ATP-binding-protein
MSRSESPRPLLEMRGISKTFPAVRALDNVSLTVYPGEIHSLMGENGAGKSTLMKILSGAYRADAGGEILIDGQRIDVDGPLAARDAGVAVIYQELCLAPNLTVAENIYVGRELRRGNRRWGTIDRAAMARGCQDVLARLGAPFGPDTLVGTLSIAEQQLVEIARAVHTRARILVMDEPTTPLSSRETEHLFGLIRQLREEGLAIIYISHRMAEIYELSDRVSVLRDGTYVGTLERAALSADRLVAMMVGRDISGFYKKEHAPYDPGHLLLSVRDIADDERVRGCSLDLHAGEVLGIAGLVGAGRTELARLIFGAEPRTRGEVKLGERTFGAHSPRDAIDAGLVYLTEDRKRQGLFLDMSVRDNINISVCNRDARLGTLDLARGAERARDAIASLSIRVPHANVNVGALSGGNQQKVLLSRLLETKPRVLILDEPTRGVDIGAKSEIYRIINELARAGVGVIVISSELPEIIGVADRVLVMREGEIAGELGGHTHTPITQEAIIALATGSQAELADAH
>NC_017920.1|WP_014722958.1|1486288_1487536_-|ROK-family-protein
MRSPHIGQGSNSANVRRYNERLLLKTLRRAGSASKADLARLANMTGTAVGSIIASLADAKLIEFAGRTEGQRGQPASLIRLDPRGAFGIGVHLDRMRIETALVNFAGDVLGRRSHDTLLPPPAEVIEIVRHDIDAMQALLPAHERARLAGIGVAQPYNLGAWMRELGLAPDTFRAWEDVDFASDLGRTVSLPVFGENDGNAAAIAELFYGYGRQCDDFVYLFIGPAIGGGIAIDGDCLRGVTGNAGDIAVIPVLPSRLASAPPPRGPWDILLARASLHALVRHLRHHGETVESRADLEACIARGLPAVTEWIDDCVDALAPALRAVLCVVDAPVVVLDADTDVGLLDALTSRLRAALVATAPEARGTPTLVRGTFGADAGAIGAATLPMYFNFSPRAGILRGARIESQEVNHVAI
>NC_017920.1|WP_011884656.1|1488807_1491291_+|ribonuclease-R
MSKYPYPIPSREEILGVLRTSDAPLAANDIAEALSIKRQEREGFFRRVAAMERDGQIRLDKRGHYQLTHPSNFVAGRVQGHRDGYGFVIRDDGQDDLFLPNGEMQKVMHNDRVLARIVGYDRRGRPEGHVVEVTERANKRVIGRLLNENGALIVAPEDKRIGHDILITQNVKKAKVGQVVVVELTDFPSRHSQPLGRVVEVLGDIDDPGMEIEIAVRKYGVPHEFSQPALDEAAALPDKVRPADLRFRVDLRDVPLVTIDGEDARDFDDAVYCEPTKVGRGDGFRLIVAIADVSHYVQPGNGLDADALERSTSVYFPRRVIPMLPEKLSNGLCSLNPQVDRCVLACDMVITARGEIKAYQFYPAVIHSAARLTYTEVAAVLSNTKGPEAARRADLLPHLQDLYGVYKALFAARQKRGAIDFDTTETYIVCNSQGKIEQIVPRQRNDAHKLIEECMLAANVCAADFLKRNKHAGLYRVHAGPTPEKLENLRAFLRGMGLTLGGGEKPHASDYAALMAQIRDRPDAQMLQPMLLRSMQQAVYSPDNIGHFGLAYEAYAHFTSPIRRYPDLLTHRAIYAILSGKKYTPKAPEGFELNTALSPRARAMQQADDETRGRSRPNTAIWEELGLHCSANERRADEASRDVEAWLKCYFMRDKLGEEYGGMVNGVTSFGIFVQLDTLFIEGLVHVTELGSDYFQYDEIKNELRGERTGIRYRLSDRVRVQVSRVDLDARKIDFRLVRDTPVKAPRPAPQAPAAGGNGNANANGSDRGGPRLRMLPAADEAAPRRKQAASAPTAAVKEARAARAAKKKGGAAAKTPAKKAHPRKKY

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Crispr_ID: NC_017920_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017920_2

3001138-3001395

Orphan

Consensus_repeat	Method
TGTCGCTCGCCGTGNCGN	CRT

5 spacers

The CRISPR arrays of NC_017920_2

>merge|NC_017920|2|3001138-3001395|CRT
TGTCGGTCGTCGTGGCGGTCGTCGTGGCGGTCGTCGTGGCGGTCGTCGTGTCGCTCGCCGTGGCGGTCGCCGTGGCGGTCGCCGTGTCGCTCGCCGTGGCGGTCGCCGTGTCGCTCGCCGTGTCGCTCGCCGTGTCGCTCGTCGTGTCGCTCGTCGTGTCGCTCGCCGTGTCGCTCGTCGTGGCGGTCGCCGTGGCGGTCGCCGTGTCGCTCGCCGTGTCGCTCGCCGTGTCGCTCGCCGTGTCGCTCGCCGTGGCGG

>NC_017920|2|1|3001138-3001395|CRT
TGTCGGTCGTCGTGGCGG	TCGTCGTGGCGGTCGTCGTGGCGGTCGTCG
TGTCGCTCGCCGTGGCGG	TCGCCGTGGCGGTCGCCGTGTCGCTCGCCGTGGCGGTCGCCGTGTCGCTCGCCG
TGTCGCTCGCCGTGTCGC	TCGTCGTGTCGCTCGTCG
TGTCGCTCGCCGTGTCGC	TCGTCGTGGCGGTCGCCGTGGCGGTCGCCG
TGTCGCTCGCCGTGTCGC	TCGCCGTGTCGCTCGCCG
TGTCGCTCGCCGTGGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_017920.1\|WP_011886261.1\|2995599_2996346_-\|flagellar-hook-assembly-protein-FlgD	unknown	unknown	gnl\|CDD\|235847
NC_017920.1\|WP_011886277.1\|3011650_3012415_+\|5-oxoprolinase-subunit-PxpA	unknown	unknown	gnl\|CDD\|235446
NC_017920.1\|WP_011886265.1\|2999003_2999336_+\|flagellar-biosynthesis-anti-sigma-factor-FlgM	unknown	unknown	gnl\|CDD\|274802
NC_017920.1\|WP_014723815.1\|2997562_2998885_+\|flagellar-basal-body-P-ring-formation-protein-FlgA	unknown	unknown	gnl\|CDD\|180794
NC_017920.1\|WP_014723814.1\|2994329_2995571_-\|flagellar-hook-protein-FlgE	unknown	unknown	gnl\|CDD\|235557
NC_017920.1\|WP_011886263.1\|2996868_2997357_-\|flagellar-basal-body-rod-protein-FlgB	unknown	unknown	gnl\|CDD\|183632
NC_017920.1\|WP_041493911.1\|3005448_3006417_-\|complex-I-NDUFA9-subunit-family-protein	unknown	unknown	gnl\|CDD\|187579
NC_017920.1\|WP_011886270.1\|3004745_3005393_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|198303
NC_017920.1\|WP_011886258.1\|2992726_2993515_-\|flagellar-basal-body-rod-protein-FlgG	unknown	unknown	gnl\|CDD\|183688
NC_017920.1\|WP_011886257.1\|2992016_2992706_-\|flagellar-basal-body-L-ring-protein-FlgH	unknown	unknown	gnl\|CDD\|237175
NC_017920.1\|WP_011886259.1\|2993550_2994309_-\|flagellar-basal-body-rod-protein-FlgF	unknown	unknown	gnl\|CDD\|183642
NC_017920.1\|WP_041493912.1\|3006578_3008531_-\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381604
NC_017920.1\|WP_011886266.1\|2999421_2999862_+\|flagellar-protein-FlgN	unknown	unknown	gnl\|CDD\|377465
NC_017920.1\|WP_011886262.1\|2996402_2996828_-\|flagellar-basal-body-rod-protein-FlgC	unknown	unknown	gnl\|CDD\|235556
NC_017920.1\|WP_014723823.1\|3010527_3011595_+\|biotin-dependent-carboxyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224895
NC_017920.1\|WP_014723821.1\|3009213_3009726_-\|winged-helix-DNA-binding-protein	unknown	unknown	gnl\|CDD\|227918
NC_017920.1\|WP_014723818.1\|3003507_3004749_-\|multifunctional-CCA-addition/repair-protein	unknown	unknown	gnl\|CDD\|182810
NC_017920.1\|WP_014723822.1\|3009874_3010531_+\|5-oxoprolinase-subunit-PxpB	unknown	unknown	gnl\|CDD\|224960
NC_017920.1\|WP_046423598.1\|3008539_3009148_+\|5-formyltetrahydrofolate-cyclo-ligase	unknown	unknown	gnl\|CDD\|274270
NC_017920.1\|WP_014723817.1\|3002388_3003189_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380339

Protein	Function_ID	Function_description	E-value
NC_017920.1\|WP_011886261.1\|2995599_2996346_-\|flagellar-hook-assembly-protein-FlgD	gnl\|CDD\|235847	PRK06655, flgD, flagellar hook assembly protein FlgD.	1.24894e-73
NC_017920.1\|WP_011886277.1\|3011650_3012415_+\|5-oxoprolinase-subunit-PxpA	gnl\|CDD\|235446	PRK05406, PRK05406, 5-oxoprolinase subunit PxpA.	7.34979e-143
NC_017920.1\|WP_011886265.1\|2999003_2999336_+\|flagellar-biosynthesis-anti-sigma-factor-FlgM	gnl\|CDD\|274802	TIGR03824, FlgM_jcvi, flagellar biosynthesis anti-sigma factor FlgM. FlgM interacts with and inhibits the alternative sigma factor sigma(28) FliA. The C-terminus of FlgM contains the sigma(28)-binding domain.	4.75034e-14
NC_017920.1\|WP_014723815.1\|2997562_2998885_+\|flagellar-basal-body-P-ring-formation-protein-FlgA	gnl\|CDD\|180794	PRK07018, flgA, flagellar basal body P-ring formation protein FlgA.	5.1971e-82
NC_017920.1\|WP_014723814.1\|2994329_2995571_-\|flagellar-hook-protein-FlgE	gnl\|CDD\|235557	PRK05682, flgE, flagellar hook protein FlgE; Validated.	1.20898e-160
NC_017920.1\|WP_011886263.1\|2996868_2997357_-\|flagellar-basal-body-rod-protein-FlgB	gnl\|CDD\|183632	PRK12626, flgB, flagellar basal body rod protein FlgB; Provisional.	3.40566e-106
NC_017920.1\|WP_041493911.1\|3005448_3006417_-\|complex-I-NDUFA9-subunit-family-protein	gnl\|CDD\|187579	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs. This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.33932e-82
NC_017920.1\|WP_011886270.1\|3004745_3005393_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|198303	cd03194, GST_C_3, C-terminal, alpha helical domain of an unknown subfamily 3 of Glutathione S-transferases. Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.	6.21577e-53
NC_017920.1\|WP_011886258.1\|2992726_2993515_-\|flagellar-basal-body-rod-protein-FlgG	gnl\|CDD\|183688	PRK12694, flgG, flagellar basal body rod protein FlgG; Reviewed.	4.01457e-154
NC_017920.1\|WP_011886257.1\|2992016_2992706_-\|flagellar-basal-body-L-ring-protein-FlgH	gnl\|CDD\|237175	PRK12697, flgH, flagellar basal body L-ring protein FlgH.	1.24499e-145
NC_017920.1\|WP_011886259.1\|2993550_2994309_-\|flagellar-basal-body-rod-protein-FlgF	gnl\|CDD\|183642	PRK12640, flgF, flagellar basal body rod protein FlgF; Reviewed.	1.25147e-141
NC_017920.1\|WP_041493912.1\|3006578_3008531_-\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381604	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	9.73016e-70
NC_017920.1\|WP_011886266.1\|2999421_2999862_+\|flagellar-protein-FlgN	gnl\|CDD\|377465	pfam05130, FlgN, FlgN protein. This family includes the FlgN protein and export chaperone involved in flagellar synthesis.	6.55905e-30
NC_017920.1\|WP_011886262.1\|2996402_2996828_-\|flagellar-basal-body-rod-protein-FlgC	gnl\|CDD\|235556	PRK05681, flgC, flagellar basal body rod protein FlgC; Reviewed.	2.56312e-71
NC_017920.1\|WP_014723823.1\|3010527_3011595_+\|biotin-dependent-carboxyltransferase-family-protein	gnl\|CDD\|224895	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism].	2.346e-135
NC_017920.1\|WP_014723821.1\|3009213_3009726_-\|winged-helix-DNA-binding-protein	gnl\|CDD\|227918	COG5631, COG5631, Predicted transcription regulator, contains HTH domain (MarR family) [Transcription].	7.73074e-58
NC_017920.1\|WP_014723818.1\|3003507_3004749_-\|multifunctional-CCA-addition/repair-protein	gnl\|CDD\|182810	PRK10885, cca, multifunctional CCA addition/repair protein.	0
NC_017920.1\|WP_014723822.1\|3009874_3010531_+\|5-oxoprolinase-subunit-PxpB	gnl\|CDD\|224960	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism].	1.90774e-94
NC_017920.1\|WP_046423598.1\|3008539_3009148_+\|5-formyltetrahydrofolate-cyclo-ligase	gnl\|CDD\|274270	TIGR02727, Uncharacterized_protein_YqgN, 5,10-methenyltetrahydrofolate synthetase. This enzyme, 5,10-methenyltetrahydrofolate synthetase, is also called 5-formyltetrahydrofolate cycloligase. Function of bacterial proteins in this family was inferred originally from the known activity of eukaryotic homologs. Recently, activity was shown explicitly for the member from Mycoplasma pneumonia. Members of this family from alpha- and gamma-proteobacteria, designated ygfA, are often found in an operon with 6S structural RNA, and show a similar pattern of high expression during stationary phase. The function may be to deplete folate to slow 1-carbon biosynthetic metabolism. [Central intermediary metabolism, One-carbon metabolism].	1.4213e-43
NC_017920.1\|WP_014723817.1\|3002388_3003189_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	1.28045e-27

>NC_017920.1|WP_011886266.1|2999421_2999862_+|flagellar-protein-FlgN
MREELLATVNDEHATVEAFASLLAYEEKALTTPQPLDMLPGIVEKKSELIDRLAQLERTRDAQLSALGFPAGKKGMDQAAERDARLAGRWQLLLQATERARQANATNGMLIRIRMDYNDRALAVLRSASAPAGVYGPDGRVSALMR
>NC_017920.1|WP_011886265.1|2999003_2999336_+|flagellar-biosynthesis-anti-sigma-factor-FlgM
MKIDSTPNPSPLAPTGNGATRAQSGAASSSSAQAGDAGSTGGDTSVNLSGLSGQLRSLSASGSADINTALVQSIKDALKDGSLTIDVNKIADGVLNTARDLLQRQRSQSN
>NC_017920.1|WP_014723815.1|2997562_2998885_+|flagellar-basal-body-P-ring-formation-protein-FlgA
MTGSALRDDGARGKRVRRAFALAAALWLAAPGAHADDAMIVIPGRGETVETALAHASAAGVAGVAGVAGAAGVGQPGRGGAGVATVAGSGGAAPVGNAGVGAIAGAGMVGAGTVAPAAQPAGTMVVVDVPAPAAVPSAAPRAAYADARANSVSSAYAAHAANASNFAGSRYAAPRAADPGAVATVVAGAPEPASNPTRPAFARAAAVRTAYAAPAPAAPAPQPAAAAQPATPPGQQDPESIRRSALAFLQQQIAGLPGKTTTTVAAAFPRGLAECTTLEPFLPTGARLWGRTTVGVRCAGARPWTVYLQAKVTVQATYYVAARQIAPGEPLTAADLIARNGDLTVLPLAVITDPAQAIGATSLARIAAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGNALANAAPGQSVRVRMAAGQIVTAIVKDAGTVEIPL
>NC_017920.1|WP_011886263.1|2996868_2997357_-|flagellar-basal-body-rod-protein-FlgB
MLDKLDAEFAFGRQALDVRAYRQELLSSNIANADTPGYQARDVDFASALARSLKQTDGGLAPSNAAQLPMAQPAGVTSGMTMVSTAPGHMAGAAKLIPTGGPADDYGRAQYRMPLQPSLDGNTVDLDVERVQFANNALHYESGMTVMTQQIKTMIAAITSNQ
>NC_017920.1|WP_011886262.1|2996402_2996828_-|flagellar-basal-body-rod-protein-FlgC
MPSLMNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPLGGARTASGQGVGGVRVTKVVDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTLTIGT
>NC_017920.1|WP_011886261.1|2995599_2996346_-|flagellar-hook-assembly-protein-FlgD
MTSSNTTIGSNGTNVSTLPTDTMNTNKVSTTGTSASDLQATFLKLLVTQLQNQDPTSPVDSSQMTSQLAQINTVSGIAQLNSSLSSLSTQLAAGQQTQAALLIGTNVLAPGNDVSVKSGAASPFGVSLANDVSNLTITVKNSAGVVVNTIDAGKQSAGTVPFNWTPTDAAGNALPDGKYTVSAQYTGSDGKTYAPTVLAAAQVQSVIKQADGTAGLVLSNGTTVGLTQVASIFPNTASSSSGGTTTTN
>NC_017920.1|WP_014723814.1|2994329_2995571_-|flagellar-hook-protein-FlgE
MGYQQGLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTTLGSVQKQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNAQGMNLMGYTADKNGVVSTAQTVPLQAPTSNIAPTPTTKIVGQFNLNSQDVVPTKTPFNATDSATYNYSTAIQVYDSLGGSQAVNMYFVKSAAGAWEAYAGVQGGTMTDLGTVKFDSSGAITSTTLPASATPTASLGQFQFSVPTTDGSSTPQALTLDLTGTTQYGGKDGVNNLAQDGYASGTLTTFSIGADGKLTGNYSNGQTAVLGQIAIANFNNPNGLINLGGNQYAETAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLINL
>NC_017920.1|WP_011886259.1|2993550_2994309_-|flagellar-basal-body-rod-protein-FlgF
MDRLIYTAMTGASQSLDQQAIVANNLANTSTTGFRAQLANYRAVPMNFGDGSTIDPTTTRTYVLASTPGADYAPGPITRTGNPLDVAVQGAGWLSVQTADGGEAYTRAGNLHVDENGQLVNASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAMVDQMKLVNPDPTTLTRGNDGLFRTADGNPADADPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLLNFS
>NC_017920.1|WP_011886258.1|2992726_2993515_-|flagellar-basal-body-rod-protein-FlgG
MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQTELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSFQTNAQGQLVTSSGYQILPAITVPQNAQSLTIGKDGVVSVTQPGSNNAVQIGSLQIATFINPAGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQMKT
>NC_017920.1|WP_011886257.1|2992016_2992706_-|flagellar-basal-body-L-ring-protein-FlgH
MKQVRLLPSATVRAACAVAVAALAGCAQIPRDPIIQQPMTAQPPMPIAMQAPGSIFNPGFAGRPLFEDQRPRNVGDILTIVIAENINATKSSGANTNRQGNTDFNVPTAAFLGGLFAKANLSATGANKFAATGGASAANTFNGTITVTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISGANSVYSTQVADARIEYSAKGYINEAETMGWLQRFFLNLAPW
>NC_017920.1|WP_014723817.1|3002388_3003189_+|helix-turn-helix-transcriptional-regulator
MDSDIMRIGQRIRRLRREAKKTLLEVATEAHLSVGFLSQVERNLTGISLSSLVNVANALKVPLGTLIDQPRQAQPDSHAGRREPYALDAASQWYERLSTTFDGSQINALKVRMMEGYRSEWVAHGGDEFVYVLAGRVCYTIGKRDYPLSAGDSLHFDARKRHRVANVGDGPAELIAVGTLPLFDDGAELGSAAMKIRLLAREAGATPGEPRVSRRESVSNGVRADDEPAASAAATPTRGSTQPAGGKPRAAAGKGRVAAARARTKQ
>NC_017920.1|WP_014723818.1|3003507_3004749_-|multifunctional-CCA-addition/repair-protein
MNIYAVGGAIRDALLGVPVQDRDYVVVGATPEQMAAQGFRPVGKDFPVFLHPDTQEEYALARTERKTAAGYHGFQFYYAPDVTLDEDLARRDLTINAMARELSPDGTLIGPVIDPFDGQADLRARVFRHVSDAFVEDPVRILRIARFAARFADFTVADETLALMRRMVDAGEADALVPERVWQEIARGLMEATPSRMFDVLRECGALARVLPEVDALWGVPQRADYHPEVDTGVHVMMVVDYAAKQGYSLPVRFAALTHDLGKATTPADVLPRHVGHEGRSVELIKPLCERLRVPNECRDLALVVAREHCNLHRVMEMGAAALVRLFERSDALRKPARFAEMLQACESDARGRLGLDTQPYPQAERLRVALVAARSVDAGAIARGIGNDAMQIKDAVHRARIDAVKQALAIAE
>NC_017920.1|WP_011886270.1|3004745_3005393_-|glutathione-S-transferase-family-protein
MKLVIGDKNYSSWSMRPWLLLAHFGIPFDEIAIELRRDDTAARIREYSPTGKVPCLIDDHGFAIWDSLAIAETLAERYPQFPMWPADPLDRAHARCISAEMHAGFTALRTEMVMNVRASAPGRGATPDALADVARIDTLWGACLAASGGPFLFGEFGIADAMYAPVVMRFNTYAPELSPEAAGYAARVTALPAVQRWIEGARRETNVIAEYESTP
>NC_017920.1|WP_041493911.1|3005448_3006417_-|complex-I-NDUFA9-subunit-family-protein
MERQTVALLGGTGFIGSRLVNALIEAGKHVRVATRRREHARHLQMLPIEIVELDALDARTLTGFVAGAHAAVNLIGVLHGGRGSPYGPGFERAHVAVPAALGAACAQAGVRRVLHMSALGADSNGPSMYQRSKGDGEAALRAAAASAAAGPLALTIFRPSVVFGPGDAFLNTFANLQRTLPVLPLAMPDARFQPVFVGDVVRAFVNTLDLAAAHGKTYELGGPTVYTLEQLVRYCGTLVGRHARIVRLPDALAQLQARVFECLPGEPVITRDNLASMSQPNVLSGPLAPELGLTPASLESIAPAYLGAAAQRSRFDWFRARR
>NC_017920.1|WP_041493912.1|3006578_3008531_-|lytic-transglycosylase-domain-containing-protein
MSNSLFRVYRAVALTLSAAALVAGTSACAAPGDDTLAGDDQIFVQLREAARRNDAAKAAQLASMIPNYPVPSYVEYFQIKPQLFDSTGRARVDAPDAPVQSFLQRYDGQAIADRLRNDYLLVLGARHDWRGFDDQYKRFVLDDDTQVKCYALESRAARGENVADAARALLVEPKYYGDACVDLITALTVNQQFTSDDVWQQARLAFEQNYTTLGGKIVDALGPRPAGFDQATSAPPLYLARGVGADAASHQLALIALGRMARNDPDAAAGMLTSLAGSLTKREQAIAWGAIGYQAAIKRSALASDWYAKSANAPLSNPGYEWRTRAALLAGNWPMVRWSIEQMPPSLRSDPAWIYWHARALKQSGDTLQANQEFEQVAGQYNFYGQLAGEELGQRTSVPPRTKVSDAEIDAMSKIPGFALAQRFYGLNLRLEGNREWNWPLRGMTDRQLLAAAAYGKRVELLDRTVNTADRTKAEHDFTLRYPSPYRDIVERYAQSTGLDVEWAYGLIRQESRFITNARSSVGAGGLMQLMPATAQLVAKKLGMGTITRAQMHDIDTNIQLGTWYLADIYNNFDSSPVLATAGYNAGPGRPRQWRQVLTRPVEGAIFAETIPFNETREYVKNVLSNTVYYAALFEGKPQSLKKRLGTISP
>NC_017920.1|WP_046423598.1|3008539_3009148_+|5-formyltetrahydrofolate-cyclo-ligase
MEHEVSESIACNPVPNPKVALRRTLSGARRDAASQPAANAALEARLRGLLERLAPRTVGFYWPLPGEFDARDAVLAWAAAGPGRRAALPVIGEKHTPLAFHAWDAHTPMREGHHRIPEPASGIAVVPDLLLIPCVGFDLQRYRLGYGGGYYDRTLAAWPGDTLPVTVGIAYDACRVDALPAEAHDLAMGWIVTDRALYPDAG
>NC_017920.1|WP_014723821.1|3009213_3009726_-|winged-helix-DNA-binding-protein
MKRSPTKIVSSEHLVSESSVELSELEYGLIMAGNAFNRWMVRCMSAAGAKDMTAVEVSLLHHVSHRERKKKLADICFVLNIEDTHVATYALKKLIARGYVKSEKSGKEVFFFATDAGRALCMKYREVREHCLIETLKDSGLTNEQIGDAAQLLRNASGLYDTAARAAASL
>NC_017920.1|WP_014723822.1|3009874_3010531_+|5-oxoprolinase-subunit-PxpB
MTQPRIYPLGDAALVCEMPAPATLDCQRRVWAVAEAARAWPDVIDVVPGMNNLTIVFDALASTAESLTPALRDAWDSADVAPVPGRDVEIPVEYGGAAGPDLAAVAAHTGLSADEVVARHAGGEYVVFFVGFQPGFAYLGGLDPALHTPRRAAPRLEVPAGSVGIGGAQTGIYPATAPGGWQLIGRTSQVLFDPARPQPTLLLPGDRVHFTIAGVDAT
>NC_017920.1|WP_014723823.1|3010527_3011595_+|biotin-dependent-carboxyltransferase-family-protein
MTQKTAPGTIEVVRAGPLSTVQDLGRRGMRHLGVAQGGALDGLALEVGNRLVGNRPDAAAVEITIGPAAFRFTRATRIAITGTEFGATLDGKPVYSWWSLPVDAGQTLVLPAAKRGMRGYLCIAGGIDVLPVLGSRSTDLAARFGGLGGRALRDGDRLPVGVPPAGAGCLASDAPEFGVKAPAWCAFVRVDEPPRRHRPAHAPWAMPVRVLPGPDYASFSAESQQALWDEEWLVTANSNRMGYRLAGAELVRERPVELLSHAVLPGTIQVPPNGQPIVLMHDAQTTGGYPKIGTVIRADLWKLAQARLNLPIRFVRSTPEAARAALNAERAYLRQIDVAIEMREETRRRAQSRAA
>NC_017920.1|WP_011886277.1|3011650_3012415_+|5-oxoprolinase-subunit-PxpA
MEIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGANAMRDCVRWAVQKGVSIGAHPSFHDPENFGRKEMQLPPGDIYAGVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDPTIADAVVSAIHDFDPSLSVFGLANSVFVAAARHAGLVAIEEVFADRGYRADGTLVPRSQPGALIDDEDAVLARTLDMVRERQVRAVTGEWVPLNAQTVCLHGDGPHALAFAKRIRAALETAGIDVIAPGALQAGEDA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_017920_2	2.3\|3001276\|18\|NC_017920\|CRT	3001276-3001293	18	NC_017920.1	236728-236745	1	0.944
NC_017920_2	2.3\|3001276\|18\|NC_017920\|CRT	3001276-3001293	18	NC_017920.1	379260-379277	1	0.944
NC_017920_2	2.3\|3001276\|18\|NC_017920\|CRT	3001276-3001293	18	NC_017921.1	1314441-1314458	1	0.944
NC_017920_2	2.5\|3001360\|18\|NC_017920\|CRT	3001360-3001377	18	NC_017920.1	236728-236745	1	0.944
NC_017920_2	2.5\|3001360\|18\|NC_017920\|CRT	3001360-3001377	18	NC_017920.1	571234-571251	1	0.944
NC_017920_2	2.5\|3001360\|18\|NC_017920\|CRT	3001360-3001377	18	NC_017920.1	2835591-2835608	1	0.944
NC_017920_2	2.5\|3001360\|18\|NC_017920\|CRT	3001360-3001377	18	NC_017920.1	1439031-1439048	1	0.944
NC_017920_2	2.5\|3001360\|18\|NC_017920\|CRT	3001360-3001377	18	NC_017920.1	2126952-2126969	1	0.944

1. spacer 2.3|3001276|18|NC_017920|CRT matches to position: 236728-236745, mismatch: 1, identity: 0.944

tcgtcgtgtcgctcgtcg	CRISPR spacer
tcgccgtgtcgctcgtcg	Protospacer
***.**************

2. spacer 2.3|3001276|18|NC_017920|CRT matches to position: 379260-379277, mismatch: 1, identity: 0.944

tcgtcgtgtcgctcgtcg	CRISPR spacer
tcgtcgtgccgctcgtcg	Protospacer
********.*********

3. spacer 2.3|3001276|18|NC_017920|CRT matches to position: 1314441-1314458, mismatch: 1, identity: 0.944

tcgtcgtgtcgctcgtcg	CRISPR spacer
tcggcgtgtcgctcgtcg	Protospacer
*** **************

4. spacer 2.5|3001360|18|NC_017920|CRT matches to position: 236728-236745, mismatch: 1, identity: 0.944

tcgccgtgtcgctcgccg	CRISPR spacer
tcgccgtgtcgctcgtcg	Protospacer
***************.**

5. spacer 2.5|3001360|18|NC_017920|CRT matches to position: 571234-571251, mismatch: 1, identity: 0.944

tcgccgtgtcgctcgccg	CRISPR spacer
tcggcgtgtcgctcgccg	Protospacer
*** **************

6. spacer 2.5|3001360|18|NC_017920|CRT matches to position: 2835591-2835608, mismatch: 1, identity: 0.944

tcgccgtgtcgctcgccg	CRISPR spacer
tcgccatgtcgctcgccg	Protospacer
*****.************

7. spacer 2.5|3001360|18|NC_017920|CRT matches to position: 1439031-1439048, mismatch: 1, identity: 0.944

tcgccgtgtcgctcgccg	CRISPR spacer
tcgcggtgtcgctcgccg	Protospacer
**** *************

8. spacer 2.5|3001360|18|NC_017920|CRT matches to position: 2126952-2126969, mismatch: 1, identity: 0.944

tcgccgtgtcgctcgccg	CRISPR spacer
tcgccgtgtcgctcaccg	Protospacer
**************.***

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	76719-76748	0	1.0
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	76731-76760	0	1.0
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	76719-76748	2	0.933
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	76731-76760	2	0.933
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	76707-76736	3	0.9
NC_017920_1	1.1\|1476594\|25\|NC_017920\|CRISPRCasFinder	1476594-1476618	25	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	119816-119840	4	0.84
NC_017920_1	1.1\|1476594\|25\|NC_017920\|CRISPRCasFinder	1476594-1476618	25	NZ_CP029209	Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence	484960-484984	4	0.84
NC_017920_1	1.1\|1476594\|25\|NC_017920\|CRISPRCasFinder	1476594-1476618	25	CP027110	Cronobacter sakazakii strain CS-09 plasmid pCsaCS09a, complete sequence	42167-42191	4	0.84
NC_017920_1	1.1\|1476594\|25\|NC_017920\|CRISPRCasFinder	1476594-1476618	25	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	253003-253027	4	0.84
NC_017920_1	1.1\|1476594\|25\|NC_017920\|CRISPRCasFinder	1476594-1476618	25	CP049261	Cronobacter sakazakii strain CS-09 plasmid pCsaCS09c, complete sequence	119875-119899	4	0.84
NC_017920_1	1.1\|1476594\|25\|NC_017920\|CRISPRCasFinder	1476594-1476618	25	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	354441-354465	4	0.84
NC_017920_1	1.1\|1476594\|25\|NC_017920\|CRISPRCasFinder	1476594-1476618	25	CP045779	Cronobacter sakazakii strain CFSAN068773 plasmid p1CFSAN068773, complete sequence	119456-119480	4	0.84
NC_017920_1	1.1\|1476594\|25\|NC_017920\|CRISPRCasFinder	1476594-1476618	25	NC_009780	Cronobacter sakazakii ATCC BAA-894 plasmid pESA3, complete sequence	41787-41811	4	0.84
NC_017920_1	1.1\|1476594\|25\|NC_017920\|CRISPRCasFinder	1476594-1476618	25	NZ_KY978630	Cronobacter sakazakii strain 505108 plasmid p505108-T6SS, complete sequence	42213-42237	4	0.84
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MH651167	Gordonia phage Angelique, complete genome	30482-30511	4	0.867
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	76707-76736	4	0.867
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NC_008703	Mycobacterium sp. KMS plasmid pMKMS01, complete sequence	296511-296540	4	0.867
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	MH651167	Gordonia phage Angelique, complete genome	30482-30511	4	0.867
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_LR134451	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence	98852-98881	4	0.867
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	384437-384466	4	0.867
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	267970-267999	4	0.867
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	105199-105228	4	0.867
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	430201-430230	4	0.867
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	665366-665395	4	0.867
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP004394	Celeribacter indicus strain P73 plasmid pP73A, complete sequence	97521-97550	4	0.867
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MN096378	Microbacterium phage MCubed, complete genome	29036-29065	5	0.833
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	1370896-1370925	5	0.833
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	386443-386472	5	0.833
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	481729-481758	5	0.833
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NC_009806	Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence	43872-43901	5	0.833
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	407627-407656	5	0.833
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	542622-542651	5	0.833
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP021128	Rhizobium sp. Kim5 plasmid pRetKim5d, complete sequence	212309-212338	5	0.833
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP029359	Azospirillum sp. CFH 70021 plasmid unnamed4	147310-147339	5	0.833
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NC_010311	Streptomyces sp. HK1 plasmid pSHK1, complete sequence	18928-18957	5	0.833
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	598228-598257	5	0.833
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	338752-338781	5	0.833
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP054616	Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence	584763-584792	5	0.833
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2118544-2118573	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	747947-747976	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	2113585-2113614	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP014942	Rhodococcus sp. BH4 plasmid, complete sequence	538396-538425	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_AP022334	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49b, complete sequence	82586-82615	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_AP014706	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence	19114-19143	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP015523	Sphingomonas sp. NIC1 plasmid unnamed2, complete sequence	447-476	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	531481-531510	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	394444-394473	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	113796-113825	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NC_014918	Mesorhizobium ciceri biovar biserrulae WSM1271 plasmid pMESCI01, complete sequence	265150-265179	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP048426	Rhizobium daejeonense strain KACC 13094 plasmid unnamed3, complete sequence	170193-170222	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	332800-332829	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MN062704	Gordonia phage JuJu, complete genome	20943-20972	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	472730-472759	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP017422	Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence	41297-41326	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP018784	Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence	414311-414340	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP013739	Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence	151240-151269	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP044976	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-1, complete sequence	205973-206002	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP039651	Azospirillum sp. TSA2s plasmid p1	264504-264533	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP037914	Sphingomonas sp. AAP5 plasmid p213, complete sequence	108269-108298	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	142322-142351	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	460089-460118	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MK894432	Microbacterium phage Finny, complete genome	29004-29033	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	32523-32552	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1860859-1860888	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5025953-5025982	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	218884-218913	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	394444-394473	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NC_009806	Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence	10420-10449	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP020716	Cnuibacter physcomitrellae strain XA(T) plasmid unnamed1, complete sequence	81897-81926	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	113796-113825	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	142322-142351	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	KR935213	Rhodobacter phage RcTitan, complete genome	10812-10841	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	MF140416	Mycobacterium phage LastHope, complete genome	41760-41789	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	MN234172	Mycobacterium phage ThulaThula, complete genome	11210-11239	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	MN062704	Gordonia phage JuJu, complete genome	20943-20972	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_LR134450	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence	189230-189259	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP015737	Shinella sp. HZN7 plasmid pShin-01, complete sequence	268052-268081	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	696615-696644	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	357470-357499	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	370727-370756	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP035710	Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence	90495-90524	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	AP018462	Mycobacterium phage D12 DNA, complete genome	19658-19687	6	0.8
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	AP018463	Mycobacterium phage PR DNA, complete genome	19635-19664	6	0.8
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NC_013860	Azospirillum sp. B510 plasmid pAB510f, complete sequence	210082-210111	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	218884-218913	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MH588544	Caulobacter phage CcrBL10, complete genome	166722-166751	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MN586028	Gordonia phage MelBins, complete genome	54516-54545	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_LR134458	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 16, complete sequence	31179-31208	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NC_012523	Rhodococcus opacus B4 plasmid pKNR, complete sequence	38740-38769	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NC_012797	Desulfovibrio magneticus RS-1 plasmid pDMC1, complete sequence	21423-21452	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	662543-662572	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	44496-44525	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP016488	Synechococcus sp. PCC 8807 plasmid unnamed5, complete sequence	17476-17505	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP037915	Sphingomonas sp. AAP5 plasmid p150, complete sequence	78003-78032	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP042332	Bosea sp. F3-2 plasmid pB32-1, complete sequence	146705-146734	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP042916	Rhodococcus qingshengii strain RL1 plasmid unnamed1, complete sequence	130614-130643	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	KY555145	Caulobacter phage Ccr29, complete genome	186138-186167	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	KY555143	Caulobacter phage Ccr2, complete genome	179285-179314	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MH616796	Microviridae sp. isolate ctbh024, complete genome	3464-3493	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	JQ807235	Environmental Halophage eHP-14, partial genome	28936-28965	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NC_019407	Caulobacter phage CcrMagneto, complete genome	178661-178690	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	AP013375	Uncultured Mediterranean phage uvMED DNA, complete genome, group G13, isolate: uvMED-CGR-U-MedDCM-OCT-S29-C4	8506-8535	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	KY555144	Caulobacter phage Ccr5, complete genome	178980-179009	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	KY555142	Caulobacter phage Ccr10, complete genome	178810-178839	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NC_019411	Caulobacter phage CcrSwift, complete genome	179414-179443	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	224243-224272	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP027930	Microbacterium sp. SGAir0570 plasmid pSGAir0570_2, complete sequence	25936-25965	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_LR134458	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 16, complete sequence	31179-31208	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NC_008010	Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence	77851-77880	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP016488	Synechococcus sp. PCC 8807 plasmid unnamed5, complete sequence	17476-17505	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	36554-36583	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	134246-134275	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	MH051255	Mycobacterium phage Leston, complete genome	59367-59396	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NC_024366	Mycobacterium phage OkiRoe, complete genome	60380-60409	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP013739	Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence	155210-155239	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	181498-181527	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	8707-8736	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP019037	Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence	61642-61671	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	353500-353529	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	595112-595141	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP021821	Sinorhizobium meliloti strain M162 plasmid accessoryA, complete sequence	117819-117848	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	458727-458756	7	0.767
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	MN096378	Microbacterium phage MCubed, complete genome	29036-29065	7	0.767
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NC_022125	Rhodococcus erythropolis CCM2595 plasmid pRECF1, complete sequence	8759-8788	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP015205	Rhodococcus sp. 008 plasmid pR8C2, complete sequence	51763-51792	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP025960	Rhodococcus qingshengii strain djl-6-2 plasmid pDJL1, complete sequence	29702-29731	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP040720	Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence	328275-328304	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP011297	Rhodococcus erythropolis strain BG43 plasmid pRLLBG43, complete sequence	92817-92846	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NZ_CP017300	Rhodococcus sp. YL-1 plasmid pYLC1, complete sequence	413658-413687	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NC_008010	Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence	77851-77880	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MK279875	Arthrobacter phage Riverdale, complete genome	11242-11271	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MK279876	Arthrobacter phage Rozby, complete genome	11242-11271	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MK112538	Arthrobacter phage Carpal, complete genome	11260-11289	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MK279880	Arthrobacter phage Savage2526, complete genome	11305-11334	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	KX621005	Arthrobacter phage Vallejo, complete genome	11243-11272	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MK279886	Arthrobacter phage TattModd, complete genome	11305-11334	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MK279896	Arthrobacter phage Zorro, complete genome	11259-11288	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MK279845	Arthrobacter phage Cholula, complete genome	11305-11334	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MK279892	Arthrobacter phage Wawa, complete genome	11280-11309	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NC_041943	Arthrobacter phage Korra, complete genome	11259-11288	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MG198782	Arthrobacter phage MeganNoll, complete genome	11311-11340	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MF140407	Arthrobacter phage Dino, complete genome	11259-11288	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	KU160662	Arthrobacter phage RAP15, complete genome	11311-11340	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	KU160649	Arthrobacter phage Immaculata, complete genome	11305-11334	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MK814749	Arthrobacter phage Scuttle, complete genome	11311-11340	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	NC_041940	Arthrobacter phage Glenn, complete genome	11311-11340	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MK279901	Arthrobacter phage Potatoes, complete genome	11305-11334	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MG198781	Arthrobacter phage Fluke, complete genome	11301-11330	8	0.733
NC_017920_2	2.1\|3001156\|30\|NC_017920\|CRT	3001156-3001185	30	MK112528	Arthrobacter phage Beethoven, complete genome	11253-11282	8	0.733
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	410960-410989	8	0.733
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1417556-1417585	8	0.733
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	854545-854574	8	0.733
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	958580-958609	8	0.733
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	618187-618216	8	0.733
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP026517	Deinococcus sp. NW-56 plasmid unnamed1, complete sequence	140193-140222	8	0.733
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_AP017657	Sphingobium cloacae strain JCM 10874 plasmid pSCLO_3, complete sequence	63617-63646	8	0.733
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	698801-698830	8	0.733
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	382202-382231	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	61834-61863	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	547067-547096	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	560088-560117	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1515228-1515257	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1156621-1156650	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1356847-1356876	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	563204-563233	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	991945-991974	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	662380-662409	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	722465-722494	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	219581-219610	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	938097-938126	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	568196-568225	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	88409-88438	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1650633-1650662	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	803761-803790	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	565657-565686	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1614836-1614865	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	575926-575955	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	561605-561634	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	478552-478581	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	1072635-1072664	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	560688-560717	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	581472-581501	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	507102-507131	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	564534-564563	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1427837-1427866	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	565662-565691	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	581472-581501	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	624655-624684	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	569100-569129	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	581470-581499	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	558606-558635	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	624655-624684	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	569100-569129	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	891482-891511	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	581472-581501	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	624655-624684	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP011274	Planctomyces sp. SH-PL62 plasmid pPL62-1, complete sequence	46960-46989	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	558634-558663	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	624659-624688	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	569100-569129	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	569100-569129	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	569100-569129	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	581472-581501	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1533377-1533406	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	581472-581501	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	558634-558663	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	575909-575938	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	575861-575890	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	610315-610344	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	567674-567703	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	567611-567640	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	581472-581501	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	558634-558663	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	624655-624684	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	657872-657901	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	581469-581498	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	558634-558663	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	558634-558663	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	581472-581501	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	569102-569131	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1505126-1505155	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	581472-581501	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	581472-581501	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1505126-1505155	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	MN813682	Microbacterium phage Matzah, complete genome	22690-22719	9	0.7
NC_017920_2	2.4\|3001312\|30\|NC_017920\|CRT	3001312-3001341	30	NC_023498	Mycobacterium phage Validus, complete genome	60859-60888	9	0.7

1. spacer 2.1|3001156|30|NC_017920|CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 0, identity: 1.0

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tcgtcgtggcggtcgtcgtggcggtcgtcg	Protospacer
******************************

2. spacer 2.1|3001156|30|NC_017920|CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 0, identity: 1.0

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tcgtcgtggcggtcgtcgtggcggtcgtcg	Protospacer
******************************

3. spacer 2.4|3001312|30|NC_017920|CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 2, identity: 0.933

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tcgtcgtggcggtcgtcgtggcggtcgtcg	Protospacer
***************.***********.**

4. spacer 2.4|3001312|30|NC_017920|CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 2, identity: 0.933

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tcgtcgtggcggtcgtcgtggcggtcgtcg	Protospacer
***************.***********.**

5. spacer 2.1|3001156|30|NC_017920|CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 3, identity: 0.9

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tcgtcgtggcggtcgtcgtggccgtcggag	Protospacer
********************** ****  *

6. spacer 1.1|1476594|25|NC_017920|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gcgagcgtcagcgcttcatcgccta	CRISPR spacer
gcgagcgtcagcgcttcgtcgcggc	Protospacer
*****************.****

7. spacer 1.1|1476594|25|NC_017920|CRISPRCasFinder matches to NZ_CP029209 (Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence) position: , mismatch: 4, identity: 0.84

gcgagcgtcagcgcttcatcgccta	CRISPR spacer
gccagcgtcagcgcttcatcgacac	Protospacer
** ****************** *

8. spacer 1.1|1476594|25|NC_017920|CRISPRCasFinder matches to CP027110 (Cronobacter sakazakii strain CS-09 plasmid pCsaCS09a, complete sequence) position: , mismatch: 4, identity: 0.84

gcgagcgtcagcgcttcatcgccta	CRISPR spacer
gcgagcgccagcgcttcttcgccgg	Protospacer
*******.********* ***** .

9. spacer 1.1|1476594|25|NC_017920|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 4, identity: 0.84

gcgagcgtcagcgcttcatcgccta	CRISPR spacer
ctgagcgtgagcgcttcatcgccaa	Protospacer
 .****** ************** *

10. spacer 1.1|1476594|25|NC_017920|CRISPRCasFinder matches to CP049261 (Cronobacter sakazakii strain CS-09 plasmid pCsaCS09c, complete sequence) position: , mismatch: 4, identity: 0.84

gcgagcgtcagcgcttcatcgccta	CRISPR spacer
gcgagcgccagcgcttcttcgccgg	Protospacer
*******.********* ***** .

11. spacer 1.1|1476594|25|NC_017920|CRISPRCasFinder matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 4, identity: 0.84

gcgagcgtcagcgcttcatcgccta	CRISPR spacer
ccgagcgtctgcgcgtcatcgcctt	Protospacer
 ******** **** *********

12. spacer 1.1|1476594|25|NC_017920|CRISPRCasFinder matches to CP045779 (Cronobacter sakazakii strain CFSAN068773 plasmid p1CFSAN068773, complete sequence) position: , mismatch: 4, identity: 0.84

gcgagcgtcagcgcttcatcgccta	CRISPR spacer
gcgagcgccagcgcttcttcgccgg	Protospacer
*******.********* ***** .

13. spacer 1.1|1476594|25|NC_017920|CRISPRCasFinder matches to NC_009780 (Cronobacter sakazakii ATCC BAA-894 plasmid pESA3, complete sequence) position: , mismatch: 4, identity: 0.84

gcgagcgtcagcgcttcatcgccta	CRISPR spacer
gcgagcgccagcgcttcttcgccgg	Protospacer
*******.********* ***** .

14. spacer 1.1|1476594|25|NC_017920|CRISPRCasFinder matches to NZ_KY978630 (Cronobacter sakazakii strain 505108 plasmid p505108-T6SS, complete sequence) position: , mismatch: 4, identity: 0.84

gcgagcgtcagcgcttcatcgccta	CRISPR spacer
gcgagcgccagcgcttcttcgccgg	Protospacer
*******.********* ***** .

15. spacer 2.1|3001156|30|NC_017920|CRT matches to MH651167 (Gordonia phage Angelique, complete genome) position: , mismatch: 4, identity: 0.867

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tactggtggcggtcgtcgtggcggtcgccg	Protospacer
*  * **********************.**

16. spacer 2.4|3001312|30|NC_017920|CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 4, identity: 0.867

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tcgtcgtggcggtcgtcgtggccgtcggag	Protospacer
***************.****** ****  *

17. spacer 2.4|3001312|30|NC_017920|CRT matches to NC_008703 (Mycobacterium sp. KMS plasmid pMKMS01, complete sequence) position: , mismatch: 4, identity: 0.867

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tcgtcgccgcggtcgccgtggcggtcgtgg	Protospacer
******. *******************. *

18. spacer 2.4|3001312|30|NC_017920|CRT matches to MH651167 (Gordonia phage Angelique, complete genome) position: , mismatch: 4, identity: 0.867

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tactggtggcggtcgtcgtggcggtcgccg	Protospacer
*  * **********.**************

19. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_LR134451 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence) position: , mismatch: 4, identity: 0.867

tcgtcg-tggcggtcgccgtggcggtcgccg	CRISPR spacer
-cgtcgacgacggtcgccgtggcgatcgccg	Protospacer
 ***** .*.**************.******

20. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 4, identity: 0.867

tcgtcgtggcggtcgccgtggcggtcgccg-	CRISPR spacer
tcgtcctgacggtcgccgtggcgg-cgctgt	Protospacer
***** **.*************** ***.*

21. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 4, identity: 0.867

tcgtcgtggcggtcgccgtggcggtcgccg-	CRISPR spacer
tcgtcctgacggtcgccgtggcgg-cgctgt	Protospacer
***** **.*************** ***.*

22. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 4, identity: 0.867

tcgtcgtggcggtcgccgtggcggtcgccg-	CRISPR spacer
tcgtcctgacggtcgccgtggcgg-cgctgt	Protospacer
***** **.*************** ***.*

23. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 4, identity: 0.867

tcgtcgtggcggtcgccgtggcggtcgccg-	CRISPR spacer
tcgtcctgacggtcgccgtggcgg-cgctgt	Protospacer
***** **.*************** ***.*

24. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 4, identity: 0.867

tcgtcgtggcggtcgccgtggcggtcgccg-	CRISPR spacer
tcgtcctgacggtcgccgtggcgg-cgctgt	Protospacer
***** **.*************** ***.*

25. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP004394 (Celeribacter indicus strain P73 plasmid pP73A, complete sequence) position: , mismatch: 4, identity: 0.867

tcgtcgt-ggcggtcgccgtggcggtcgccg	CRISPR spacer
-cgtcgcgggcggtggccgtggcggtcgcgg	Protospacer
 *****. ****** ************** *

26. spacer 2.1|3001156|30|NC_017920|CRT matches to MN096378 (Microbacterium phage MCubed, complete genome) position: , mismatch: 5, identity: 0.833

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
ccttcgtggcggtcttcgtggcggtcttgg	Protospacer
.* *********** *********** * *

27. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 5, identity: 0.833

--tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
ggccgt--tggcgctcgtcgtgacggtcgtcg	Protospacer
  .***  ***** ********.*********

28. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.833

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
acttggtggcggtcgccttggcggtggccg	Protospacer
 * * ************ ******* ****

29. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 5, identity: 0.833

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tcgtcgtgtcggtctccgtggcggtcagcc	Protospacer
******** ***** ***********. *

30. spacer 2.4|3001312|30|NC_017920|CRT matches to NC_009806 (Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence) position: , mismatch: 5, identity: 0.833

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tggcggtggcggtggccgtggcggtggccg	Protospacer
* *. ******** *********** ****

31. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 5, identity: 0.833

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tcttcgtggcggtcgccgtggcgccggtcg	Protospacer
** ******************** . *.**

32. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 5, identity: 0.833

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tcttcgtggcggtcgccgtggcgccggtcg	Protospacer
** ******************** . *.**

33. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP021128 (Rhizobium sp. Kim5 plasmid pRetKim5d, complete sequence) position: , mismatch: 5, identity: 0.833

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
acgctgtggcggtccccatggcggtcgccg	Protospacer
 **..********* **.************

34. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP029359 (Azospirillum sp. CFH 70021 plasmid unnamed4) position: , mismatch: 5, identity: 0.833

-tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
gccgccg-ggcggtcgccatggcggtcgccc	Protospacer
 .**.** **********.***********

35. spacer 2.4|3001312|30|NC_017920|CRT matches to NC_010311 (Streptomyces sp. HK1 plasmid pSHK1, complete sequence) position: , mismatch: 5, identity: 0.833

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tcgcattggcggtcgccgtcgccgtcgccg	Protospacer
***.  ************* ** *******

36. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 5, identity: 0.833

tcgtcgtggcggtcgccgtggcggtcgccg-	CRISPR spacer
tcgtcctgacggtcgccgtggcgg-cactgt	Protospacer
***** **.*************** *.*.*

37. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 5, identity: 0.833

--tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
ggtcg--gtggcggtcgcggtggcggtcagcg	Protospacer
  ***  *********** *********. **

38. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.833

tcgtc-gtggcggtcgccgtggcggtcgccg	CRISPR spacer
-cgtcggtggcggtcgccgtgacggtcaggg	Protospacer
 **** ***************.*****.  *

39. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tcgtcgttgcggtcgtcgtgccgggcagtg	Protospacer
******* ************ *** *. .*

40. spacer 2.1|3001156|30|NC_017920|CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
ccacggtggcgatcgtcgcggcggtcgtcg	Protospacer
.*.. ******.******.***********

41. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
ccacggtggcgatcgtcgcggcggtcgtcg	Protospacer
.*.. ******.******.***********

42. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP014942 (Rhodococcus sp. BH4 plasmid, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tccagtcggcggtcgtcgaggcggtcgtcg	Protospacer
**    .*********** ***********

43. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_AP022334 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49b, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tagcgatggcggtcgtcgcggcggtcgtca	Protospacer
* *. .************.**********.

44. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_AP014706 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
cctccggggcggtcgtcgtcgcggtcgtca	Protospacer
.* .** ************ *********.

45. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP015523 (Sphingomonas sp. NIC1 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tgatgctggcggtcgtcgtggcgctcggcg	Protospacer
* .*  ***************** *** **

46. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tggatgtggcggtcgtcggggcgggcgtca	Protospacer
* * .************* ***** ****.

47. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tcttcgtggcggtcgccgtggcgccgatcg	Protospacer
** ************.******* . .***

48. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tgggggcggcggtcgccgtggccgtcgtcg	Protospacer
* *  *.********.****** *******

49. spacer 2.1|3001156|30|NC_017920|CRT matches to NC_014918 (Mesorhizobium ciceri biovar biserrulae WSM1271 plasmid pMESCI01, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
cctacctggcggtcgtcgtggcgatggtcg	Protospacer
.*  * *****************.* ****

50. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP048426 (Rhizobium daejeonense strain KACC 13094 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tcgtcgtcgcggtcttcgtggcgggcctta	Protospacer
******* ****** ********* * *..

51. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tgatcggggcggtcgtcgtggtggtcgctg	Protospacer
* .*** **************.*****..*

52. spacer 2.1|3001156|30|NC_017920|CRT matches to MN062704 (Gordonia phage JuJu, complete genome) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tatttctggcggtcgccctggcggtcgtcg	Protospacer
*  *. *********.* ************

53. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcg--tggcggtcgtcgtggcggtcgtcg	CRISPR spacer
--gccggccggcggtcggcgtcgcggtcgtcg	Protospacer
  *.**  .******** *** **********

54. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP017422 (Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
ttgccgtggcgggtgtcgtggcggtcgcca	Protospacer
*.*.******** .*************.*.

55. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP018784 (Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
acttcgcggcggtcgtcgtcgcggtctccg	Protospacer
 * ***.************ ****** .**

56. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP013739 (Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtg--gcggtcgtcgtggcggtcgtcg	CRISPR spacer
--ggcgagatgcggtcctcgtggcggtcgtcc	Protospacer
  * ** *  ****** **************

57. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP044976 (Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-1, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tagtcgcggcggtcgtcgtggcgcacgcgg	Protospacer
* ****.****************  **. *

58. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP039651 (Azospirillum sp. TSA2s plasmid p1) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
acgcggcggcggtcgacgaggcggtcgtcg	Protospacer
 **. *.******** ** ***********

59. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP037914 (Sphingomonas sp. AAP5 plasmid p213, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
ccgtcgcgccggtcgtcgtggcgggtgccg	Protospacer
.*****.* *************** .*.**

60. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tcttcgtggcggtcgccgtggcgccgatcg	Protospacer
** ************.******* . .***

61. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcg--tggcggtcgtcgtggcggtcgtcg	CRISPR spacer
--gccggccggcggtcggcgtcgcggtcgtcg	Protospacer
  *.**  .******** *** **********

62. spacer 2.1|3001156|30|NC_017920|CRT matches to MK894432 (Microbacterium phage Finny, complete genome) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
ccttcgtggcggtcttcgcggcggtcttgg	Protospacer
.* *********** ***.******* * *

63. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccttgtcggtcgccgtggcggtcgccg	Protospacer
  ..* ** *********************

64. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tctcgacggcggtctccgtggcggtcgccg	Protospacer
** . ..******* ***************

65. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tactgctggccgtcgcggtggcggtcgccg	Protospacer
*  *  **** ***** *************

66. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tcgtcgtggcggtcgccgcggcggaatacc	Protospacer
******************.*****    *

67. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tcttcgtggcggtcgccgtggcgccgatcg	Protospacer
** ******************** . ..**

68. spacer 2.4|3001312|30|NC_017920|CRT matches to NC_009806 (Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
cggtcgtggcgctggccgtggcggtcggct	Protospacer
. ********* * ************* *

69. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP020716 (Cnuibacter physcomitrellae strain XA(T) plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tggccgtggctgtggccgtggcggtcgtgg	Protospacer
* *.****** ** *************. *

70. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tgggggcggcggtcgccgtggccgtcgtcg	Protospacer
* *  *.*************** ****.**

71. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tcttcgtggcggtcgccgtggcgccgatcg	Protospacer
** ******************** . ..**

72. spacer 2.4|3001312|30|NC_017920|CRT matches to KR935213 (Rhodobacter phage RcTitan, complete genome) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
ccgcaagggcggtcgccgtcgcggtcgccg	Protospacer
.**. . ************ **********

73. spacer 2.4|3001312|30|NC_017920|CRT matches to MF140416 (Mycobacterium phage LastHope, complete genome) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
acgtcgcggcggtcgccgcggcggtgaacg	Protospacer
 *****.***********.****** . **

74. spacer 2.4|3001312|30|NC_017920|CRT matches to MN234172 (Mycobacterium phage ThulaThula, complete genome) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggc--ggtcgccg	CRISPR spacer
gcgtcgcggcggtcgccgtggcgaggttgt--	Protospacer
 *****.***************  ***.*.

75. spacer 2.4|3001312|30|NC_017920|CRT matches to MN062704 (Gordonia phage JuJu, complete genome) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tatttctggcggtcgccctggcggtcgtcg	Protospacer
*  *. *********** *********.**

76. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_LR134450 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
ccgcggcggcggtcgccgtggccgacgccg	Protospacer
.**. *.*************** * *****

77. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP015737 (Shinella sp. HZN7 plasmid pShin-01, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tcggtcaggcgatcgccgtggccgtcgccg	Protospacer
*** .  ****.********** *******

78. spacer 2.4|3001312|30|NC_017920|CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg--	CRISPR spacer
acgtcgtcgcggtcgccatggcgg--gccagc	Protospacer
 ****** *********.******  ***.

79. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tcttcgtcgcggtcgccgtggcgccggtcg	Protospacer
** **** *************** . *.**

80. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tcttcgtcgcggtcgccgtggcgccggtcg	Protospacer
** **** *************** . *.**

81. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP035710 (Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
acgcccaggcggtagccggggcggtcgccg	Protospacer
 **.*  ****** **** ***********

82. spacer 2.4|3001312|30|NC_017920|CRT matches to AP018462 (Mycobacterium phage D12 DNA, complete genome) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tggtggtggcggtggccgtggcggtaacca	Protospacer
* ** ******** *********** .**.

83. spacer 2.4|3001312|30|NC_017920|CRT matches to AP018463 (Mycobacterium phage PR DNA, complete genome) position: , mismatch: 6, identity: 0.8

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tggtggtggcggtggccgtggcggtaacca	Protospacer
* ** ******** *********** .**.

84. spacer 2.1|3001156|30|NC_017920|CRT matches to NC_013860 (Azospirillum sp. B510 plasmid pAB510f, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tggcgctcgcggtcgtcttggcggtcgtct	Protospacer
* *.  * ********* ***********

85. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tcgtcgtggcggtcgccgcggcggaatacc	Protospacer
***************.**.*****    *

86. spacer 2.1|3001156|30|NC_017920|CRT matches to MH588544 (Caulobacter phage CcrBL10, complete genome) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
gcttcgaggcggtcgtcgtggcgctcggtc	Protospacer
 * *** **************** *** .

87. spacer 2.1|3001156|30|NC_017920|CRT matches to MN586028 (Gordonia phage MelBins, complete genome) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tcgtcgtgccggtcgtcgtggtcgccgcgc	Protospacer
******** ************. *.**.

88. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_LR134458 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 16, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
cggcggcgccggtcgtcgtggcggtcgccg	Protospacer
. *. *.* ******************.**

89. spacer 2.1|3001156|30|NC_017920|CRT matches to NC_012523 (Rhodococcus opacus B4 plasmid pKNR, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tcgtcgcggcggtcgtcgtggtgaagctag	Protospacer
******.**************.*.   * *

90. spacer 2.1|3001156|30|NC_017920|CRT matches to NC_012797 (Desulfovibrio magneticus RS-1 plasmid pDMC1, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
atgccgtgccggtcgtcgtggccgtcgccc	Protospacer
 .*.**** ************* ****.*

91. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
gggtcgcggcggtcgtcgcggcggtgatgg	Protospacer
  ****.***********.****** .* *

92. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
gggcggtcccggtcgtcgtggcgctcgtcg	Protospacer
  *. **  ************** ******

93. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP016488 (Synechococcus sp. PCC 8807 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
ttgtcgtggcgatcgccgtggcggtgatta	Protospacer
*.*********.***.********* .*..

94. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP037915 (Sphingomonas sp. AAP5 plasmid p150, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tttgcgtggccggcgtcgtggcggtcgcgg	Protospacer
*.  ****** * **************. *

95. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP042332 (Bosea sp. F3-2 plasmid pB32-1, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
ttcatgcggcgatcgtcgtggcgatcgtcg	Protospacer
*.  .*.****.***********.******

96. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP042916 (Rhodococcus qingshengii strain RL1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tccagtcggcggtcgtcgaggcagtcgtcg	Protospacer
**    .*********** ***.*******

97. spacer 2.1|3001156|30|NC_017920|CRT matches to KY555145 (Caulobacter phage Ccr29, complete genome) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtggcgcttgtcgtggcggtgcttg	Protospacer
  ********* *.***********  *.*

98. spacer 2.1|3001156|30|NC_017920|CRT matches to KY555143 (Caulobacter phage Ccr2, complete genome) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtggcgcttgtcgtggcggtgcttg	Protospacer
  ********* *.***********  *.*

99. spacer 2.1|3001156|30|NC_017920|CRT matches to MH616796 (Microviridae sp. isolate ctbh024, complete genome) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
tcgtcgtggccgtcgtcgtggtcgtggctc	Protospacer
********** **********. ** *..

100. spacer 2.1|3001156|30|NC_017920|CRT matches to JQ807235 (Environmental Halophage eHP-14, partial genome) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
cggtcgtggcggtcgtggtggcgatggccc	Protospacer
. ************** ******.* *.*

101. spacer 2.1|3001156|30|NC_017920|CRT matches to NC_019407 (Caulobacter phage CcrMagneto, complete genome) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtggcgcttgtcgtggcggtgcttg	Protospacer
  ********* *.***********  *.*

102. spacer 2.1|3001156|30|NC_017920|CRT matches to AP013375 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G13, isolate: uvMED-CGR-U-MedDCM-OCT-S29-C4) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aagtcgtggcggaagtcgtggcggtggcgg	Protospacer
  **********  *********** *. *

103. spacer 2.1|3001156|30|NC_017920|CRT matches to KY555144 (Caulobacter phage Ccr5, complete genome) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtggcgtttgtcgtggcggtgcttg	Protospacer
  ********* *.***********  *.*

104. spacer 2.1|3001156|30|NC_017920|CRT matches to KY555142 (Caulobacter phage Ccr10, complete genome) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtggcgcttgtcgtggcggtgcttg	Protospacer
  ********* *.***********  *.*

105. spacer 2.1|3001156|30|NC_017920|CRT matches to NC_019411 (Caulobacter phage CcrSwift, complete genome) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtggcgcttgtcgtggcggtgcttg	Protospacer
  ********* *.***********  *.*

106. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
gcctcgcggcggtcgccgtggcgggaggca	Protospacer
 * ***.*****************  * *.

107. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP027930 (Microbacterium sp. SGAir0570 plasmid pSGAir0570_2, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
ccgtcgtggccgtcgccgtggcgctcatgt	Protospacer
.********* ************ **..

108. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_LR134458 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 16, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
cggcggcgccggtcgtcgtggcggtcgccg	Protospacer
. *. *.* ******.**************

109. spacer 2.4|3001312|30|NC_017920|CRT matches to NC_008010 (Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
gggtcgtggcggtcgcggtggcggttcaca	Protospacer
  ************** ********.  *.

110. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP016488 (Synechococcus sp. PCC 8807 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
ttgtcgtggcgatcgccgtggcggtgatta	Protospacer
*.*********.************* ....

111. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
ggctggccgcgctcgccgtggcggtcgccg	Protospacer
   * *. *** ******************

112. spacer 2.4|3001312|30|NC_017920|CRT matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tgctgtcggcggtcgcggtcgcggtcgccg	Protospacer
*  *  .********* ** **********

113. spacer 2.4|3001312|30|NC_017920|CRT matches to MH051255 (Mycobacterium phage Leston, complete genome) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
gcgtcgtggcggttgcggtggcggtcatgt	Protospacer
 ************.** *********..

114. spacer 2.4|3001312|30|NC_017920|CRT matches to NC_024366 (Mycobacterium phage OkiRoe, complete genome) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
gcgtcgtggcggttgcggtggcggtcatgt	Protospacer
 ************.** *********..

115. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP013739 (Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
gtgacacggcggtcgacgtggcggtcgccc	Protospacer
 .* *..******** *************

116. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tgccggtggcggtcgccatggcggtggcct	Protospacer
*  . ************.******* ***

117. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
tcgtcgaggcggtggccgtggcggcgttgg	Protospacer
****** ****** **********.  . *

118. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP019037 (Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
gcatgccggcggcggccgtggcggtcgccg	Protospacer
 *.*  .*****. ****************

119. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
gcttcgtggcgatcgccgtggcgatcagct	Protospacer
 * ********.***********.**. *

120. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
gcttcgtggcgatcgccgtggcgatcagct	Protospacer
 * ********.***********.**. *

121. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP021821 (Sinorhizobium meliloti strain M162 plasmid accessoryA, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
accaccaggcgatcgccgtggtggtcgccg	Protospacer
 *  *  ****.*********.********

122. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
accaccaggcgatcgccgtggtggtcgccg	Protospacer
 *  *  ****.*********.********

123. spacer 2.4|3001312|30|NC_017920|CRT matches to MN096378 (Microbacterium phage MCubed, complete genome) position: , mismatch: 7, identity: 0.767

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
ccttcgtggcggtcttcgtggcggtcttgg	Protospacer
.* *********** .********** . *

124. spacer 2.1|3001156|30|NC_017920|CRT matches to NC_022125 (Rhodococcus erythropolis CCM2595 plasmid pRECF1, complete sequence) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
cgttggcatcggtcgtcgtggccgtcgtcg	Protospacer
.  * *.. ************* *******

125. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP015205 (Rhodococcus sp. 008 plasmid pR8C2, complete sequence) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
cgttggcatcggtcgtcgtggccgtcgtcg	Protospacer
.  * *.. ************* *******

126. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP025960 (Rhodococcus qingshengii strain djl-6-2 plasmid pDJL1, complete sequence) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
cgttggcatcggtcgtcgtggccgtcgtcg	Protospacer
.  * *.. ************* *******

127. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP040720 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
cggacgtggatgtcgtcgtggcggtcgctt	Protospacer
. * *****  ****************..

128. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP011297 (Rhodococcus erythropolis strain BG43 plasmid pRLLBG43, complete sequence) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
cgttggcatcggtcgtcgtggccgtcgtcg	Protospacer
.  * *.. ************* *******

129. spacer 2.1|3001156|30|NC_017920|CRT matches to NZ_CP017300 (Rhodococcus sp. YL-1 plasmid pYLC1, complete sequence) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
cgttggcatcggtcgtcgtggccgtcgtcg	Protospacer
.  * *.. ************* *******

130. spacer 2.1|3001156|30|NC_017920|CRT matches to NC_008010 (Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
gggtcgtggcggtcgcggtggcggttcaca	Protospacer
  *************. ********.  *.

131. spacer 2.1|3001156|30|NC_017920|CRT matches to MK279875 (Arthrobacter phage Riverdale, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

132. spacer 2.1|3001156|30|NC_017920|CRT matches to MK279876 (Arthrobacter phage Rozby, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

133. spacer 2.1|3001156|30|NC_017920|CRT matches to MK112538 (Arthrobacter phage Carpal, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

134. spacer 2.1|3001156|30|NC_017920|CRT matches to MK279880 (Arthrobacter phage Savage2526, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

135. spacer 2.1|3001156|30|NC_017920|CRT matches to KX621005 (Arthrobacter phage Vallejo, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

136. spacer 2.1|3001156|30|NC_017920|CRT matches to MK279886 (Arthrobacter phage TattModd, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

137. spacer 2.1|3001156|30|NC_017920|CRT matches to MK279896 (Arthrobacter phage Zorro, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

138. spacer 2.1|3001156|30|NC_017920|CRT matches to MK279845 (Arthrobacter phage Cholula, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

139. spacer 2.1|3001156|30|NC_017920|CRT matches to MK279892 (Arthrobacter phage Wawa, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

140. spacer 2.1|3001156|30|NC_017920|CRT matches to NC_041943 (Arthrobacter phage Korra, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

141. spacer 2.1|3001156|30|NC_017920|CRT matches to MG198782 (Arthrobacter phage MeganNoll, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

142. spacer 2.1|3001156|30|NC_017920|CRT matches to MF140407 (Arthrobacter phage Dino, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

143. spacer 2.1|3001156|30|NC_017920|CRT matches to KU160662 (Arthrobacter phage RAP15, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

144. spacer 2.1|3001156|30|NC_017920|CRT matches to KU160649 (Arthrobacter phage Immaculata, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

145. spacer 2.1|3001156|30|NC_017920|CRT matches to MK814749 (Arthrobacter phage Scuttle, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

146. spacer 2.1|3001156|30|NC_017920|CRT matches to NC_041940 (Arthrobacter phage Glenn, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

147. spacer 2.1|3001156|30|NC_017920|CRT matches to MK279901 (Arthrobacter phage Potatoes, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

148. spacer 2.1|3001156|30|NC_017920|CRT matches to MG198781 (Arthrobacter phage Fluke, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

149. spacer 2.1|3001156|30|NC_017920|CRT matches to MK112528 (Arthrobacter phage Beethoven, complete genome) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgtcgtggcggtcgtcg	CRISPR spacer
aggtcgtgccggtcgtggtggcggtgattt	Protospacer
  ****** ******* ******** .*.

150. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
gggcgccggcggtcgccgcggcggccgccg	Protospacer
  *.  .***********.*****.*****

151. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
cggtcgtgtcggtggccgtggcggtcaggc	Protospacer
. ****** **** ************.

152. spacer 2.4|3001312|30|NC_017920|CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
gcgtcgtggcggcggccgtggcggaacgca	Protospacer
 ***********. **********    *.

153. spacer 2.4|3001312|30|NC_017920|CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
gcgtcgtggcggcggccgtggcggaacgca	Protospacer
 ***********. **********    *.

154. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
gcaacgtggcggacgccgtcgcggtcgatc	Protospacer
 *. ******** ****** ******* .

155. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP026517 (Deinococcus sp. NW-56 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
cgctcgtggcgctcgccgtggcggtgggtc	Protospacer
.  ******** ************* * .

156. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_AP017657 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_3, complete sequence) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
acctgatggcgatcgccgtggcggtcgaat	Protospacer
 * * .*****.***************

157. spacer 2.4|3001312|30|NC_017920|CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 8, identity: 0.733

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
gccgggcttcggtcgccgtggcgggcgccg	Protospacer
 *   *.  *************** *****

158. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgctct	Protospacer
  ..********* ***********  .*

159. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

160. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

161. spacer 2.4|3001312|30|NC_017920|CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

162. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

163. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

164. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

165. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

166. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
aaaagcaggcggtcgccgcggcgatcgccg	Protospacer
  .    ***********.****.******

167. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

168. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

169. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

170. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

171. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

172. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

173. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

174. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

175. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

176. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

177. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

178. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

179. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

180. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
aaaggcaggcggtcgccgcggcgatcgccg	Protospacer
  .    ***********.****.******

181. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

182. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

183. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

184. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

185. spacer 2.4|3001312|30|NC_017920|CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

186. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

187. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

188. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

189. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

190. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

191. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

192. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

193. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

194. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
aaaggcaggcggtcgccgcggcgatcgccg	Protospacer
  .    ***********.****.******

195. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

196. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

197. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP011274 (Planctomyces sp. SH-PL62 plasmid pPL62-1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
ggcccgtcgtggtcgccgtggcggtcgatc	Protospacer
   .*** *.***************** .

198. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

199. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

200. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

201. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

202. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

203. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

204. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

205. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

206. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

207. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

208. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

209. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

210. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

211. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

212. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

213. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

214. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

215. spacer 2.4|3001312|30|NC_017920|CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

216. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

217. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

218. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

219. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

220. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

221. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

222. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

223. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

224. spacer 2.4|3001312|30|NC_017920|CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
agaccgtggcggtggccgtggcggtgttct	Protospacer
  ..********* ***********  .*

225. spacer 2.4|3001312|30|NC_017920|CRT matches to MN813682 (Microbacterium phage Matzah, complete genome) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
ggcctgcggcggtcgccgtggcgctcgcgt	Protospacer
   ..*.**************** ****

226. spacer 2.4|3001312|30|NC_017920|CRT matches to NC_023498 (Mycobacterium phage Validus, complete genome) position: , mismatch: 9, identity: 0.7

tcgtcgtggcggtcgccgtggcggtcgccg	CRISPR spacer
cgatcgtggcggttgcggtggcggtcatgt	Protospacer
. .**********.** *********..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

385606 : 422952

Pseudomonas_phage(22.22%)

protease,plate,integrase,transposase

attL 380300:380316|attR 409228:409244

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
380300:380316	attL	NA	NA	NA	NA
WP_014722317.1\|385606_386113_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	7.1e-21	52.0
WP_014722318.1\|386382_387600_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	8.7e-89	43.3
WP_014722319.1\|388217_391079_-	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	8.6e-71	35.6
WP_004556769.1\|391206_391533_-	hypothetical protein	NA	NA	NA	NA
WP_014722320.1\|391542_391890_-	hypothetical protein	NA	NA	NA	NA
WP_014722321.1\|391882_392095_-	hypothetical protein	NA	NA	NA	NA
WP_014722322.1\|392087_392390_-	hypothetical protein	NA	NA	NA	NA
WP_009964272.1\|392382_392559_-	hypothetical protein	NA	NA	NA	NA
WP_050991209.1\|392923_393226_-	hypothetical protein	NA	NA	NA	NA
WP_083854874.1\|393222_393441_-	AlpA family phage regulatory protein	E5E3Y1	Burkholderia_phage	7.8e-09	60.0
WP_148278533.1\|393557_394352_-	hypothetical protein	NA	NA	NA	NA
WP_148278534.1\|394561_395857_-	hypothetical protein	NA	NA	NA	NA
WP_085954460.1\|396001_397088_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.4e-42	35.2
WP_014722327.1\|397483_398059_+	recombinase family protein	A0A219Y912	Aeromonas_phage	7.1e-25	42.6
WP_148278535.1\|398243_399806_-	hypothetical protein	NA	NA	NA	NA
WP_148278536.1\|399932_400754_-	hypothetical protein	NA	NA	NA	NA
WP_014722329.1\|400836_400977_+	hypothetical protein	NA	NA	NA	NA
WP_014722330.1\|401004_401820_-	hypothetical protein	NA	NA	NA	NA
WP_148278537.1\|401993_402365_-	hypothetical protein	NA	NA	NA	NA
WP_148278538.1\|403583_403952_-	hypothetical protein	NA	NA	NA	NA
WP_148278539.1\|404003_404285_-	hypothetical protein	NA	NA	NA	NA
WP_014722334.1\|404607_405408_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_134206819.1\|405433_405730_-	hypothetical protein	NA	NA	NA	NA
WP_014722335.1\|405722_408902_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	1.9e-58	27.3
WP_014722336.1\|408952_413515_+	RHS domain-containing protein	A0A2H4JFP5	uncultured_Caudovirales_phage	1.2e-47	50.0
409228:409244	attR	NA	NA	NA	NA
WP_072465506.1\|413514_413898_+	DUF2750 domain-containing protein	NA	NA	NA	NA
WP_083854875.1\|414026_415295_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.0e-39	42.8
WP_014722338.1\|415494_415812_+	hypothetical protein	NA	NA	NA	NA
WP_011883100.1\|415904_416687_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_011883101.1\|416683_418030_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_172820452.1\|418132_418732_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_011883103.1\|419118_419754_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_011883104.1\|419808_420324_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_011883105.1\|420339_421830_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_011883106.1\|421900_422404_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_011883107.1\|422466_422952_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_2

716681 : 725832

Hokovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883357.1\|716681_718634_+	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	7.0e-149	50.1
WP_011883359.1\|718890_720027_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	2.2e-22	27.2
WP_014722487.1\|720031_722059_+	aminodeoxychorismate synthase component I	S4VT78	Pandoravirus	2.6e-53	35.1
WP_014722488.1\|722150_722966_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	3.7e-35	32.5
WP_014722489.1\|723013_723700_-	deoxynucleoside kinase	A0A0M3UL55	Enterococcus_phage	3.6e-07	29.5
WP_011883368.1\|723696_724239_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_014722490.1\|724272_725832_-	polynucleotide adenylyltransferase PcnB	A0A1B0V011	Roseobacter_phage	1.7e-17	27.6

DBSCAN-SWA_3

1001993 : 1010432

Bacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011883830.1\|1001993_1003394_+	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	2.5e-76	37.9
WP_011883831.1\|1003401_1004352_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	2.6e-16	28.5
WP_011883833.1\|1004415_1005408_+	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	5.9e-27	30.9
WP_011883835.1\|1005481_1005829_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_011883837.1\|1006034_1006937_+	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	4.8e-52	39.9
WP_014722685.1\|1007018_1008242_-	lytic murein transglycosylase B	NA	NA	NA	NA
WP_011883840.1\|1008412_1009336_+	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	1.3e-41	35.2
WP_014722686.1\|1009460_1010432_-	alpha/beta hydrolase	A7XCB7	Tanapox_virus	8.6e-23	28.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NC_017921

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1113434 : 1162210

Burkholderia_phage(88.64%)

plate,holin,head,portal,capsid,tail,tRNA,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014724653.1\|1113434_1116227_-	toprim domain-containing protein	A0A1S5NPU9	Burkholderia_phage	0.0e+00	97.0
WP_014724654.1\|1116229_1116484_-	hypothetical protein	E5E3T3	Burkholderia_phage	2.2e-31	90.2
WP_041494274.1\|1116480_1116843_-	hypothetical protein	E5E3T4	Burkholderia_phage	6.6e-53	85.8
WP_014724656.1\|1116848_1117166_-	hypothetical protein	NA	NA	NA	NA
WP_014724657.1\|1117170_1117365_-	hypothetical protein	K4NXL1	Burkholderia_phage	1.2e-21	84.1
WP_041494275.1\|1117408_1117603_-	hypothetical protein	A0A1S5NRN5	Burkholderia_phage	2.5e-30	95.3
WP_014724659.1\|1117607_1117802_-	hypothetical protein	A0A1S5NR87	Burkholderia_phage	1.5e-24	90.6
WP_006757081.1\|1117890_1118139_-	ogr/Delta-like zinc finger family protein	A0A1S5NNI9	Burkholderia_phage	2.6e-40	97.6
WP_017923636.1\|1118166_1118355_-	hypothetical protein	A4PE59	Ralstonia_virus	1.2e-10	64.9
WP_012327650.1\|1118383_1118575_-	hypothetical protein	E5E3U0	Burkholderia_phage	1.0e-12	67.3
WP_193373726.1\|1118591_1118819_-	hypothetical protein	A4JWR7	Burkholderia_virus	6.9e-08	52.3
WP_041494090.1\|1118894_1119386_+	helix-turn-helix transcriptional regulator	E5E3U2	Burkholderia_phage	1.1e-23	39.9
WP_014724663.1\|1119376_1119757_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014724664.1\|1120222_1121374_-	phage late control D family protein	A0A1S5NV58	Burkholderia_phage	3.6e-193	96.6
WP_006757087.1\|1121370_1121799_-\|tail	phage tail protein	A0A1S5NTH4	Burkholderia_phage	1.5e-72	97.2
WP_014724665.1\|1121812_1124575_-	hypothetical protein	E5E3P9	Burkholderia_phage	0.0e+00	87.2
WP_014724666.1\|1124571_1124691_-\|tail	GpE family phage tail protein	A0A1S5NR79	Burkholderia_phage	6.1e-16	100.0
WP_014724667.1\|1124690_1125002_-\|tail	phage tail assembly protein	A0A1S5NNH9	Burkholderia_phage	3.7e-44	91.3
WP_014724668.1\|1125033_1125543_-\|tail	phage major tail tube protein	E5E3Q2	Burkholderia_phage	1.2e-87	92.9
WP_014724669.1\|1125572_1126745_-\|tail	phage tail sheath protein	A0A1S5NNH8	Burkholderia_phage	9.2e-221	95.4
WP_041494091.1\|1126856_1127606_-	site-specific DNA-methyltransferase	A0A1S5NPU0	Burkholderia_phage	4.3e-139	95.6
WP_083854908.1\|1127583_1127766_-	Com family DNA-binding transcriptional regulator	A0A1S5NPS9	Burkholderia_phage	5.7e-29	100.0
WP_014724672.1\|1127915_1128254_-	hypothetical protein	A0A1S5NQ35	Burkholderia_phage	1.4e-25	57.1
WP_041494092.1\|1128313_1128742_-	hypothetical protein	R4JMH4	Burkholderia_phage	4.7e-58	76.6
WP_014724674.1\|1128738_1130346_-	hypothetical protein	A0A1S5NTG6	Burkholderia_phage	7.2e-59	40.6
WP_041494093.1\|1130351_1130903_-\|tail	phage tail protein I	A0A1S5NRL9	Burkholderia_phage	9.3e-99	96.7
WP_014724676.1\|1130895_1131801_-\|plate	baseplate J/gp47 family protein	A0A1S5NR72	Burkholderia_phage	6.5e-158	96.3
WP_014724677.1\|1131797_1132163_-	GPW/gp25 family protein	A0A1S5NNH3	Burkholderia_phage	1.3e-56	93.4
WP_041494094.1\|1132159_1132852_-\|plate	phage baseplate assembly protein V	A0A1S5NNH1	Burkholderia_phage	3.9e-94	81.9
WP_083854909.1\|1133087_1133771_-	hypothetical protein	NA	NA	NA	NA
WP_014724678.1\|1134032_1134482_-	phage virion morphogenesis protein	A0A1S5NPT5	Burkholderia_phage	3.4e-67	92.6
WP_014724679.1\|1134481_1134892_-\|tail	phage tail protein	E5E3R4	Burkholderia_phage	1.1e-69	93.4
WP_014724680.1\|1134888_1135380_-	hypothetical protein	A0A1S5NQ26	Burkholderia_phage	7.5e-76	95.7
WP_014724681.1\|1135376_1136177_-	DUF3380 domain-containing protein	A0A1S5NV50	Burkholderia_phage	8.4e-141	96.6
WP_014724682.1\|1136169_1136490_-\|holin	phage holin family protein	A0A1S5NTF8	Burkholderia_phage	7.9e-50	97.2
WP_014724683.1\|1136489_1136864_-\|holin	phage holin family protein	A0A1S5NRL1	Burkholderia_phage	1.3e-56	99.2
WP_012327677.1\|1136866_1137079_-\|tail	tail protein X	A0A1S5NR68	Burkholderia_phage	7.6e-33	95.7
WP_041494095.1\|1137078_1137561_-\|head	head completion/stabilization protein	A0A1S5NNA6	Burkholderia_phage	5.0e-80	91.9
WP_014724685.1\|1137665_1138352_-\|terminase	terminase endonuclease subunit	A0A1S5NNA5	Burkholderia_phage	7.7e-119	96.1
WP_014724686.1\|1138348_1139368_-\|capsid	phage major capsid protein, P2 family	A0A1S5NPT2	Burkholderia_phage	1.3e-175	90.6
WP_014724687.1\|1139404_1140223_-\|capsid	GPO family capsid scaffolding protein	A0A1S5NPS0	Burkholderia_phage	5.9e-134	90.8
WP_014724688.1\|1140367_1142134_+\|terminase	terminase ATPase subunit family protein	E5E3S6	Burkholderia_phage	0.0e+00	91.0
WP_014724689.1\|1142133_1143186_+\|portal	phage portal protein	A0A1S5NV43	Burkholderia_phage	9.8e-198	97.4
WP_041494096.1\|1144159_1146238_-	AAA family ATPase	NA	NA	NA	NA
WP_083854918.1\|1146915_1147005_+	AlpA family phage regulatory protein	E5E3Y1	Burkholderia_phage	9.5e-06	84.6
WP_011881578.1\|1147507_1147786_-	hypothetical protein	NA	NA	NA	NA
WP_011881579.1\|1148168_1148927_-	TIGR00730 family Rossman fold protein	A0A1D8KUT5	Synechococcus_phage	3.3e-22	35.3
WP_034194991.1\|1148928_1151682_+	DNA polymerase I	S5M8J1	Bacillus_phage	3.3e-67	28.8
WP_014724692.1\|1151959_1153294_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_014724693.1\|1153655_1154531_+	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_014724694.1\|1154580_1155450_-	sulfurtransferase	NA	NA	NA	NA
WP_014724695.1\|1155567_1156674_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_011881587.1\|1156944_1157238_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_011881588.1\|1157234_1158119_+	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_014724697.1\|1158199_1160104_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_011881590.1\|1160226_1161036_+	GTP cyclohydrolase I FolE2	NA	NA	NA	NA
WP_014724698.1\|1161169_1162210_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.9e-93	52.3

DBSCAN-SWA_2

1934541 : 2000960

Escherichia_phage(25.0%)

plate,transposase,integrase,tRNA

attL 1973927:1973943|attR 2007535:2007551

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011881759.1\|1934541_1935354_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_011881758.1\|1935353_1937501_-	hypothetical protein	NA	NA	NA	NA
WP_034195019.1\|1938008_1939130_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_014725192.1\|1939462_1940530_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
WP_011881755.1\|1940603_1941254_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_011881754.1\|1941321_1941468_-	entericidin A/B family lipoprotein	NA	NA	NA	NA
WP_014725194.1\|1941471_1942881_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
WP_011881752.1\|1943480_1944695_-	sel1 repeat family protein	NA	NA	NA	NA
WP_148278590.1\|1944770_1946588_-	phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein	NA	NA	NA	NA
WP_041494180.1\|1946611_1947640_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	6.2e-72	44.1
WP_011881749.1\|1947636_1948410_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.6e-80	57.2
WP_146125851.1\|1951362_1951800_+	hypothetical protein	NA	NA	NA	NA
WP_014725198.1\|1951860_1952511_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_011881747.1\|1952557_1953574_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_014725199.1\|1953636_1955451_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_041494181.1\|1955467_1959004_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_041494182.1\|1959003_1960293_-	hypothetical protein	NA	NA	NA	NA
WP_014725202.1\|1960313_1962290_-	DUF3274 domain-containing protein	A0A077K801	Ralstonia_phage	5.8e-50	28.0
WP_083854912.1\|1962297_1963197_-	hypothetical protein	NA	NA	NA	NA
WP_041494183.1\|1963581_1966065_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	1.6e-09	30.7
WP_011881736.1\|1966255_1967677_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_081057467.1\|1967733_1969080_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_041494184.1\|1969076_1969739_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_011882424.1\|1969751_1970183_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_014725210.1\|1970420_1971608_-	porin	NA	NA	NA	NA
WP_148278591.1\|1971764_1971953_+	hypothetical protein	NA	NA	NA	NA
WP_041494185.1\|1972366_1973749_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_014725212.1\|1973775_1974543_-	ABC transporter permease subunit	NA	NA	NA	NA
1973927:1973943	attL	NA	NA	NA	NA
WP_014725213.1\|1974539_1975274_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_041494186.1\|1975279_1976083_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_014725215.1\|1976446_1977025_-	LysE family translocator	NA	NA	NA	NA
WP_014725216.1\|1977074_1978598_-	threonine ammonia-lyase, biosynthetic	NA	NA	NA	NA
WP_014725217.1\|1978632_1980207_-	gamma-glutamyltransferase	NA	NA	NA	NA
WP_041494187.1\|1980203_1981040_-	thioesterase	NA	NA	NA	NA
WP_011882430.1\|1981052_1981676_-	LysE family translocator	NA	NA	NA	NA
WP_041494188.1\|1981741_1982320_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_041494189.1\|1982316_1983222_-	alpha/beta hydrolase	A0A286MQU8	Mycobacterium_phage	1.2e-05	31.8
WP_011882433.1\|1983218_1983455_-	phosphopantetheine-binding protein	NA	NA	NA	NA
WP_014725222.1\|1983544_1984468_-	chlorinating enzyme	NA	NA	NA	NA
WP_034195170.1\|1984497_1984755_-	acyl carrier protein	NA	NA	NA	NA
WP_041494190.1\|1984687_1986289_-	amino acid adenylation domain-containing protein	A0A2K9L3I8	Tupanvirus	5.4e-38	26.7
WP_083854913.1\|1986371_1987238_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_011882438.1\|1987277_1988087_-	hypothetical protein	NA	NA	NA	NA
WP_011882439.1\|1988687_1989590_+	GHMP kinase	NA	NA	NA	NA
WP_011882440.1\|1989599_1990604_+	pyridoxal-phosphate dependent enzyme	A0A1W6JHY1	Lactococcus_phage	2.3e-18	29.7
WP_014725226.1\|1990607_1993190_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_014725227.1\|1993186_1993999_+	formyl transferase	NA	NA	NA	NA
WP_011882443.1\|1993999_1994602_+	LysE family translocator	NA	NA	NA	NA
WP_014725228.1\|1994633_1995590_+	hypothetical protein	NA	NA	NA	NA
WP_041494191.1\|1995601_1996477_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_041494192.1\|1997131_1998829_-	MCP four helix bundle domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	2.0e-19	29.8
WP_014725232.1\|1999043_2000234_-	EAL domain-containing protein	NA	NA	NA	NA
WP_081333197.1\|2000765_2000960_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
2007535:2007551	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NC_017923

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_017923_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017923_1

21368-21453

Orphan

Consensus_repeat	Method
GTGGTTTGCCTGACATTTCCGTGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_017923_1

>merge|NC_017923|1|21368-21453|CRISPRCasFinder
GTGGTTTGCCTGACATTTCCGTGGTTAGTCAGGCTTTTTCGTGGCCTCGTCGGGCGGTTTCGTGGTTTGCCTGACATTTTCGTGGT

>NC_017923|1|1|21368-21453|CRISPRCasFinder
GTGGTTTGCCTGACATTTCCGTGGT	TAGTCAGGCTTTTTCGTGGCCTCGTCGGGCGGTTTC
GTGGTTTGCCTGACATTTTCGTGGT

Protein	Signature genes	Signature genes Name	Protein_function
NC_017923.1\|WP_148278635.1\|17730_18048_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374591
NC_017923.1\|WP_041494505.1\|17394_17664_+\|transcriptional-regulator	unknown	unknown	unknown
NC_017923.1\|WP_083854937.1\|24021_24426_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378971
NC_017923.1\|WP_041494496.1\|24520_24739_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379262
NC_017923.1\|WP_014726306.1\|18400_18583_-\|hypothetical-protein	unknown	unknown	unknown
NC_017923.1\|WP_014726312.1\|26876_27527_+\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381613
NC_017923.1\|WP_041494493.1\|19870_20557_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|349760
NC_017923.1\|WP_041494494.1\|21541_22339_+\|replication-initiation-protein	unknown	unknown	gnl\|CDD\|376444
NC_017923.1\|WP_041494491.1\|18093_18351_-\|hypothetical-protein	unknown	unknown	unknown
NC_017923.1\|WP_014726314.1\|27889_28273_+\|VirB3-family-type-IV-secretion-system-protein	unknown	unknown	gnl\|CDD\|368285
NC_017923.1\|WP_041494495.1\|23052_23994_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|236645
NC_017923.1\|WP_148278634.1\|15857_16484_-\|hypothetical-protein	unknown	unknown	unknown
NC_017923.1\|WP_148278636.1\|18654_18879_-\|DUF3717-domain-containing-protein	unknown	unknown	gnl\|CDD\|378869
NC_017923.1\|WP_083854938.1\|28287_30780_+\|transporter	unknown	unknown	gnl\|CDD\|273346
NC_017923.1\|WP_050991275.1\|16616_17072_+\|antirestriction-protein	unknown	unknown	gnl\|CDD\|377006
NC_017923.1\|WP_050991276.1\|22621_22999_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236645
NC_017923.1\|WP_014726313.1\|27660_27885_+\|hypothetical-protein	unknown	unknown	unknown
NC_017923.1\|WP_148278637.1\|20558_20948_+\|hypothetical-protein	unknown	unknown	unknown
NC_017923.1\|WP_041494492.1\|18890_19484_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376266
NC_017923.1\|WP_014726311.1\|24735_26880_+\|topoisomerase-DNA-binding-C4-zinc-finger-domain-containing-protein	unknown	unknown	gnl\|CDD\|236078

Protein	Function_ID	Function_description	E-value
NC_017923.1\|WP_148278635.1\|17730_18048_-\|hypothetical-protein	gnl\|CDD\|374591	pfam16509, KORA, TrfB plasmid transcriptional repressor. KORA is a family of Gram-negative bacterial proteins that act as global repressors of genes involved in plasmid replication, conjugative transfer and stable inheritance in the IncP group of plasmids. KORA operates as a symmetric dimer, and contacts the DNA via the helix-turn-helix region at the N-terminus.	5.15355e-18
NC_017923.1\|WP_083854937.1\|24021_24426_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|378971	pfam12844, HTH_19, Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain. This family contains many example antitoxins from bacterial toxin-antitoxin systems. These antitoxins are likely to be DNA-binding domains.	1.65424e-08
NC_017923.1\|WP_041494496.1\|24520_24739_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	4.04992e-05
NC_017923.1\|WP_014726312.1\|26876_27527_+\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381613	cd16892, LT_VirB1-like, VirB1-like subfamily. This subfamily includes VirB1 protein, one of twelve proteins making up type IV secretion systems (T4SS). T4SS are macromolecular assemblies generally composed of VirB1-11 and VirD4 proteins, and are used by bacteria to transport material across their membranes. VirB1 acts as a lytic transglycosylase (LT), and is important with respect to piercing the peptidoglycan layer in the periplasm. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).	6.7586e-77
NC_017923.1\|WP_041494493.1\|19870_20557_+\|ParA-family-protein	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	1.73582e-22
NC_017923.1\|WP_041494494.1\|21541_22339_+\|replication-initiation-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	5.76334e-54
NC_017923.1\|WP_148278636.1\|18654_18879_-\|DUF3717-domain-containing-protein	gnl\|CDD\|378869	pfam12512, DUF3717, Protein of unknown function (DUF3717). This family of proteins is found in bacteria. Proteins in this family are typically between 75 and 117 amino acids in length. There is a conserved AIN sequence motif. There are two completely conserved residues (L and Y) that may be functionally important.	0.00130086
NC_017923.1\|WP_014726314.1\|27889_28273_+\|VirB3-family-type-IV-secretion-system-protein	gnl\|CDD\|368285	pfam05101, VirB3, Type IV secretory pathway, VirB3-like protein. This family includes the Type IV secretory pathway VirB3 protein, that is found associated with bacterial inner and outer membranes. The family also includes the conjugal transfer protein TrbD family that contains a nucleotide binding motif and may provide energy for the export of DNA or the export of other Trb proteins.	1.17979e-06
NC_017923.1\|WP_041494495.1\|23052_23994_+\|PAS-domain-S-box-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	3.2184e-79
NC_017923.1\|WP_014726311.1\|24735_26880_+\|topoisomerase-DNA-binding-C4-zinc-finger-domain-containing-protein	gnl\|CDD\|236078	PRK07726, PRK07726, DNA topoisomerase 3.	0
NC_017923.1\|WP_083854938.1\|28287_30780_+\|transporter	gnl\|CDD\|273346	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family. Type IV secretion systems are found in Gram-negative pathogens. They export proteins, DNA, or complexes in different systems and are related to plasmid conjugation systems. This model represents related ATPases that include VirB4 in Agrobacterium tumefaciens (DNA export) CagE in Helicobacter pylori (protein export) and plasmid TraB (conjugation).	7.5646e-142
NC_017923.1\|WP_050991275.1\|16616_17072_+\|antirestriction-protein	gnl\|CDD\|377006	pfam03230, Antirestrict, Antirestriction protein. This family includes various protein that are involved in antirestriction. The ArdB protein efficiently inhibits restriction by members of the three known families of type I systems of E. coli.	3.5183e-38
NC_017923.1\|WP_050991276.1\|22621_22999_+\|hypothetical-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	2.97669e-13
NC_017923.1\|WP_041494492.1\|18890_19484_-\|hypothetical-protein	gnl\|CDD\|376266	pfam18847, LPD29, Large polyvalent protein associated domain 29. This is an alpha and beta fold domain with conserved polar residues that is found in polyvalent proteins of conjugative elements.	3.02878e-30

>NC_017923.1|WP_148278637.1|20558_20948_+|hypothetical-protein
MAERKNPLDLSGFTPRPAAATSRPAPEVVEQISQEIGFPSRQPAGQVAVDGSKAAAAVARPGSTTGSQATDNRRRTGRNIQKGVKLTAQGVVDLEAEARYLDAPFGEVLERGIAAIRKLREMGIEDYYP
>NC_017923.1|WP_041494493.1|19870_20557_+|ParA-family-protein
MPVVVVVSPKGGVGKTTSALVLADQLARSTDVAVIDADPNKPIAMWAAGGAKPDRMTIISDADEENIIDKIEAAAAQAPFVIVDLEGTAAKIVILAVSQADLIIIPMQGSQLDASQASRALKVVEQQEKMSRRKVPYGVLLTRTSPIIRTRTMKHISSTFKEAGISLFDTELNEREAFKAMFSFALPLANLDPNDVSNLDKAIINAEEFTAEVVTKLREGMSPSQEVA
>NC_017923.1|WP_041494492.1|18890_19484_-|hypothetical-protein
MAIQYFTCAQTAALIRKALKEAFPGVKFAVRSHTYSGGASISVSWTDGPNVAQVDDVATRFKGAYFDGSIDYKGSVYHMMGGQQVRFGADYVNTRRDHSPEAIERAIDTVFRRLRGNFRDAGIARPTVDDFTHGRLWNVQLMSGGRDSVQAEIDNVLWKHSDRLKVAKSPTAGSVFVTHDDGYSRTNGAGMSAVAAH
>NC_017923.1|WP_148278636.1|18654_18879_-|DUF3717-domain-containing-protein
MPVFSVGQVKQAVKYWRAREAVAKRGQLGPRASALVDLCDRMAARRIRKIKSSGLTQQQAEALEIALYQQDLPL
>NC_017923.1|WP_014726306.1|18400_18583_-|hypothetical-protein
MTVLIEEKTDVHHDDVRQPIKIPRRDWMRLPENHRDVQNEQLYVLSSVSRRPAFVRAVLI
>NC_017923.1|WP_041494491.1|18093_18351_-|hypothetical-protein
MSTIKRINQLEIEVGNIVHAYGARFEIFEIHTYAERDENLIAMGRDKVVAAVGKWIDGRIEPGYFGPDKNFNFQGNAGVSLMIEC
>NC_017923.1|WP_148278635.1|17730_18048_-|hypothetical-protein
MAKRLTESEFERLLPHLHRVKDRTRQVLREVLVNGRTQNAVALEVGITRKAVNQMVSAAWEKYLEHGSTPAGWVTGTVTLPADLMEIVRDMEQKARERLAAEQHE
>NC_017923.1|WP_041494505.1|17394_17664_+|transcriptional-regulator
MSNEYRLEIRPECLQPAKYWAEPTGPEIQEVVKRAGLSSRAAEAFLGLSAKSDGRTIRKWISGEAPISYAAWALLCDVAGLGIIWRDES
>NC_017923.1|WP_050991275.1|16616_17072_+|antirestriction-protein
MARRFVEADNRRKTVEANENKVLSELVVEELRLKFLPLHFGTRYLQGESFLYDWASRLSPEYTRGYWHFFNLSNGGFYAAPEMKGPVEVVYPLNYYDGKMGVEAFGIVVTLYALCHMAEIYGDDRYIARYHALRAFALQHPEQAEIFRAID
>NC_017923.1|WP_148278634.1|15857_16484_-|hypothetical-protein
MNKRELRARELSLKFPANRDELLAIALDAVRELHAAVVADDAAAAEVASDRYDAVVWRLNGDTFFGCRVGAGEIIEQHCRAEAGHIPMWGQAGEFLINVSGVRSIVEVDEGFGRFRVFFKFHAVDVNKQFISETGFRSHFEVFQSGQTVDEVAEAIFAAFLAKGRTMIDPDRREDLECKNASKWPWLATTEEAAVAHVETTGQFAFGF
>NC_017923.1|WP_041494494.1|21541_22339_+|replication-initiation-protein
MSENELAEIERPESYERSVTVRNELVRRIQRMKLSEKRLLALAIAKCNPKPKLFLHRATAIDPTIGAAPGWTVRITAQEFMEAYPQIDPKHAYVDLKKAAADLWECEVEWDDEKLERGKKVKVRRKVRWIYEEVDTHTPGWIELKFSPSIAPYLLGIEKEFTRYKLRHAADLRSMYSWRLLEMMAQYRDTGVLMIDYDEFCEAMGAPESCVKDAGQLRRRVIEPAVKELQEKNSLSIDWEAVKLAGRKITGFKFRFNKDPQGRLF
>NC_017923.1|WP_050991276.1|22621_22999_+|hypothetical-protein
MNFMEVNAYLSLRFGAANPFWTLTDDSKVIRLGSAPHAVDVSSELDTHQLQRIKSLGDQVANVHCSVRFAGEHVPVYLVGKRVGERKWRGVVSAYPNFVPTDAMIDALAEQGPNNVINFPRRKVV
>NC_017923.1|WP_041494495.1|23052_23994_+|PAS-domain-S-box-protein
MNGKRAAFQELDDYLGTSSPVWKFSSASDELVLSREGGPNEPSLRVRLSAQQAEEIRRLTGVTTVLIHAVKIFRKDVELHLVGKKINGAEWAGVAAVLRDSEAVAKNSMQALAFAEQVVSEVNSIVVVLDRAGTIHRFNRMAEEYTGYKEESVIGENAQELFMSPDEGRSSRSNIARFFEQGRSYDVERVIETREGSRPFLFRNRFITAEQSADPGFIVCSGVELAGATSVEAIVRRDDQLSPVSESYALEVMHRIMDWASMVDGARALLAGLEDGSVDPRSLAHAKRIVASAVRDAYGLYEDIDARLSSSAR
>NC_017923.1|WP_083854937.1|24021_24426_-|helix-turn-helix-transcriptional-regulator
MENSKQGRTPFGERLLRARRKRGLSQKQVEMHVGIAQSNLAELELKGTTSGFTVSLALLYGVNPFWLALGKGTMDGTSPAPEWLESLTSDELELVRKFADILIAARKTKADLAAADAALTLKAPESRGGPRKAK
>NC_017923.1|WP_041494496.1|24520_24739_+|helix-turn-helix-domain-containing-protein
MNWQTIVVTLTNRAAGGWTQLELAKLCECGQSTISDLARGATEQPGADLALRLLELHGELAVRHGGVEDTGK
>NC_017923.1|WP_014726311.1|24735_26880_+|topoisomerase-DNA-binding-C4-zinc-finger-domain-containing-protein
MKRLIIGEKPSIVASVVAVLPGTPIKKGPVTQVGDDYLVPLAGHALEQAMPDEYLPDDLPINANGNKLWRASDLPIIPGSADWILHPKAKLQANISAIESLLNEVDEVVHLGDPDAEGQLLVDQLLEFLGNTKPVRRLLINDPHEKKVRDALANLRDNNEAQFRGWHMWAKARSRYDWLFGLNFTRAATLRAQELGYDGGPLTVGSVQTPMLKLVVDRDRAIENFKAIPFYALAATVVHENGTFEASWKPKDDQPGLDDAGRLVDGDIAKELVGRLSGKVAAVVEYEREPRKTAPPLPLALNELTIAGVRQFGYTGAQVLEAAQTLYDKYKVTSYPRTENRFLSEVQHQDAPAILAAIVKNVPELAPLVERADTSIKSKAFNDKKMEGNPHYGLVPTELIADLSALTDIERNVYELVVRSYVAMFYPHAVDSETKIELTIDGERFATSGKTPVSPGWRAVYKSDDDEPANTQADGNKQLLPLMQRGDAAKCSVCEAQPRKTSAPERYDEALLLAAMRNLYKFVDDAAAKERLKPKSGDDDGAVAGIGTPATRATIIAEARERGLLRPYKASKTKLESSEAARGLIDALPGAVKDPVMAGLFKLSLDAVASGEMTFDTFMERTTVFVTKIVQMLRTASMNLPVAPTVPCPKCKTGLLRQRKSEKGPFWGCSNFRSEPSCDAAYPDANGQPNFKPPAKRGMLRGFSKPGIGKKVTA
>NC_017923.1|WP_014726312.1|26876_27527_+|lytic-transglycosylase-domain-containing-protein
MMDFAILAQQCAPNVHPTTLQALVQAESGFNPFAIGVVGGHLKRQPKTLDEAVVTARALDAQGLNFSMGLGQVNKANLRRYGLTYETVFDMCSNLKAGSGILHDCYTRAVPAVGKTAAIGAALSCYYSGNFSRGFKADFKGTSYVQRVAANVAQTGPTAGVVPPIPVVLDSVPVKRSAVRQRGAASAAGEAKNDSRAAENSEPKAESWDAFGDFIK
>NC_017923.1|WP_014726313.1|27660_27885_+|hypothetical-protein
MAGGLDSGTGAVTNFKIWFYGVVGVGASIYLLYKAAECWGERASWTEFGKAVAWVAAAGGTAVLAPWAWNLFVN
>NC_017923.1|WP_014726314.1|27889_28273_+|VirB3-family-type-IV-secretion-system-protein
MAGKTKEKYSAYAGLGRVANWKGIPFMPLLLVAVGSVVTAFAGALILQSPGGLLFGFLGIPVLLFFREICKTDDQALRILSLEIRCVLARRNWLKFGKTLTLSPIRYGRTLAVYRRPFRRETRVQSH
>NC_017923.1|WP_083854938.1|28287_30780_+|transporter
MKPRISSDFGVIPATEEWLPKIGRPVTPRVTNFEDGRAMVNLRLTGIPFESASDELLTNLYDNLSGTYAGLGRDHGNRLSLWTTFSRRKVRFGQEYSFQSTFLQQFADKYLQRFRNGDYFENSFWLSLVLKYEDFDDGIRTIEQIGDEAFKSLRDYDPEYLEVYDKNGIQFSNAYRFLGGLINGEETAVPVTAAPAYEAIPDSWLHFGYDLLVIRSDTGEKYATCFDLKDFPESGWGQLNPLLTLPAEFTITQSFGCMNAHEADKALGSQANKLASAGDRATHQIQEIEEARGYVSSGELAFGDYHGALVVYGDTAKQAKENGELVKVRSKGECGVGWVKATLSAPFTFFSQVPGARTKPRPMPKTSRNLASTFCLHDYSAGKSRGNAIGDGSAVIPLQTQSKKLYSFNYHATREDETNIGEKVAGHTLIFGSTGVGKTALQLAIESFFMRFDPMLFGLDYGRGMEIWFRTVGGTYIPLKRGEPTGCAPLADLEDTPANRQFLYDLVNTCARNEDGTLSAQDKKDIKGAVDTVMDLDDPRLRTFSRLLESIPELDGNSLYLRLARWCHAGDGSLAWVFDNPARSMIDVTKLRRVCFDVTQFLVEGYEPSEPLFAYLLYMKSLMQAGGGLMCTIIEEFWAALKFRMTWEMMEKALASGRKEGEFVVLVSQQPEQAMKSHIFPQIRSLTATKIFLPDPESSFEVYRQVNMTEKEHVEFVKLSKTSRTFLVKQSNQSAFATMDLYGFDDEMVVLSGTPENSALMHEVIKETSEDPDIWLPLLQDRVFERKVRTKLRLEYGPDESVWLPKLDEAIRKRAAEREQRRESMRLQAA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_017923_1	1.1\|21393\|36\|NC_017923\|CRISPRCasFinder	21393-21428	36	NC_017923	Burkholderia sp. KJ006 plasmid pKJ006, complete sequence	21393-21428	0	1.0

1. spacer 1.1|21393|36|NC_017923|CRISPRCasFinder matches to NC_017923 (Burkholderia sp. KJ006 plasmid pKJ006, complete sequence) position: , mismatch: 0, identity: 1.0

tagtcaggctttttcgtggcctcgtcgggcggtttc	CRISPR spacer
tagtcaggctttttcgtggcctcgtcgggcggtttc	Protospacer
************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_017922

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_017920

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NC_017921

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NC_017923

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection