CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_017490	Lactococcus garvieae Lg2, complete genome	1 crisprs	cas3,csa3,DEDDh,DinG	0	0	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_017490_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017490_1

432502-432581

Orphan

Consensus_repeat	Method
CCCGCTCCTATCACGCCAACAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_017490_1

>merge|NC_017490|1|432502-432581|CRISPRCasFinder
CCCGCTCCTATCACGCCAACAGTCCCGGTAATTCCGAGTCATCCTCTTCCTGTAAATCCCGTTCCTATCACGCCAACAGT

>NC_017490|1|1|432502-432581|CRISPRCasFinder
CCCGCTCCTATCACGCCAACAGT	CCCGGTAATTCCGAGTCATCCTCTTCCTGTAAAT
CCCGTTCCTATCACGCCAACAGT

Protein	Signature genes	Signature genes Name	Protein_function
NC_017490.1\|WP_014024341.1\|431525_432200_+\|hypothetical-protein	unknown	unknown	unknown
NC_017490.1\|WP_004259148.1\|430914_431340_+\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|234796
NC_017490.1\|WP_014024343.1\|433140_434058_+\|L-2-hydroxyisocaproate-dehydrogenase	unknown	unknown	gnl\|CDD\|133427
NC_017490.1\|WP_014024339.1\|426433_426961_+\|F0F1-ATP-synthase-subunit-delta	unknown	unknown	gnl\|CDD\|235593
NC_017490.1\|WP_004259125.1\|437293_437836_+\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|237628
NC_017490.1\|WP_004259135.1\|434171_434876_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NC_017490.1\|WP_014024338.1\|423943_424720_+\|esterase-family-protein	unknown	unknown	gnl\|CDD\|223700
NC_017490.1\|WP_172796625.1\|424924_425131_+\|F0F1-ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|172066
NC_017490.1\|WP_004259114.1\|440463_441165_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NC_017490.1\|WP_004259170.1\|427026_428535_+\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|236448
NC_017490.1\|WP_014024345.1\|435678_436083_+\|hypothetical-protein	unknown	unknown	unknown
NC_017490.1\|WP_004259176.1\|425185_425899_+\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|235617
NC_017490.1\|WP_004259173.1\|425912_426419_+\|F0F1-ATP-synthase-subunit-B	unknown	unknown	gnl\|CDD\|180240
NC_017490.1\|WP_014024340.1\|428546_429428_+\|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl\|CDD\|235535
NC_017490.1\|WP_004259151.1\|429487_430897_+\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|236447
NC_017490.1\|WP_014024347.1\|439888_440287_+\|Spx/MgsR-family-RNA-polymerase-binding-regulatory-protein	unknown	unknown	gnl\|CDD\|239330
NC_017490.1\|WP_004259123.1\|437912_439739_+\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NC_017490.1\|WP_014024346.1\|436222_437260_+\|heat-inducible-transcriptional-repressor-HrcA	unknown	unknown	gnl\|CDD\|224338
NC_017490.1\|WP_014024344.1\|434859_435645_+\|D-alanyl-D-alanine-carboxypeptidase-family-protein	unknown	unknown	gnl\|CDD\|367124
NC_017490.1\|WP_004259111.1\|441161_442088_+\|1-phosphofructokinase	unknown	unknown	gnl\|CDD\|274804

Protein	Function_ID	Function_description	E-value
NC_017490.1\|WP_014024344.1\|434859_435645_+\|D-alanyl-D-alanine-carboxypeptidase-family-protein	gnl\|CDD\|367124	pfam02557, VanY, D-alanyl-D-alanine carboxypeptidase.	7.13829e-44
NC_017490.1\|WP_004259148.1\|430914_431340_+\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|234796	PRK00571, atpC, F0F1 ATP synthase subunit epsilon; Validated.	1.23399e-41
NC_017490.1\|WP_014024343.1\|433140_434058_+\|L-2-hydroxyisocaproate-dehydrogenase	gnl\|CDD\|133427	cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	5.4224e-117
NC_017490.1\|WP_014024339.1\|426433_426961_+\|F0F1-ATP-synthase-subunit-delta	gnl\|CDD\|235593	PRK05758, PRK05758, F0F1 ATP synthase subunit delta; Validated.	4.88628e-40
NC_017490.1\|WP_004259111.1\|441161_442088_+\|1-phosphofructokinase	gnl\|CDD\|274804	TIGR03828, pfkB, 1-phosphofructokinase. This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688).	4.214e-123
NC_017490.1\|WP_004259125.1\|437293_437836_+\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|237628	PRK14156, PRK14156, heat shock protein GrpE; Provisional.	7.90484e-78
NC_017490.1\|WP_014024338.1\|423943_424720_+\|esterase-family-protein	gnl\|CDD\|223700	COG0627, COG0627, Predicted esterase [General function prediction only].	2.92602e-53
NC_017490.1\|WP_004259173.1\|425912_426419_+\|F0F1-ATP-synthase-subunit-B	gnl\|CDD\|180240	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated.	2.29811e-45
NC_017490.1\|WP_004259114.1\|440463_441165_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.15231e-74
NC_017490.1\|WP_004259135.1\|434171_434876_+\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	2.85035e-48
NC_017490.1\|WP_014024340.1\|428546_429428_+\|F0F1-ATP-synthase-subunit-gamma	gnl\|CDD\|235535	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated.	3.28039e-139
NC_017490.1\|WP_014024346.1\|436222_437260_+\|heat-inducible-transcriptional-repressor-HrcA	gnl\|CDD\|224338	COG1420, HrcA, Transcriptional regulator of heat shock gene [Transcription].	1.36492e-96
NC_017490.1\|WP_004259176.1\|425185_425899_+\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|235617	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated.	1.43699e-63
NC_017490.1\|WP_172796625.1\|424924_425131_+\|F0F1-ATP-synthase-subunit-C	gnl\|CDD\|172066	PRK13466, PRK13466, F0F1 ATP synthase subunit C; Provisional.	3.72385e-19
NC_017490.1\|WP_004259170.1\|427026_428535_+\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|236448	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated.	0
NC_017490.1\|WP_004259151.1\|429487_430897_+\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|236447	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated.	0
NC_017490.1\|WP_014024347.1\|439888_440287_+\|Spx/MgsR-family-RNA-polymerase-binding-regulatory-protein	gnl\|CDD\|239330	cd03032, ArsC_Spx, Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.	2.68961e-34
NC_017490.1\|WP_004259123.1\|437912_439739_+\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0

>NC_017490.1|WP_014024341.1|431525_432200_+|hypothetical-protein
MGKEESVALEHCQELMEKVETIEDKLHQLEVIKIEFRQEIQNKINYRSALLSFSFPVLILAFYIINDFSFIHGQGQLDRSALETFLITFMLSFSLWALGIFLNDIFKKIFWSKTLPMGRKALVKQLFPKYNQKSQWLIESLEELLACETLTNTELPERYMNIKSLSYIIEVLKVKDAQTLREAVELLELEIKNIRVEQSLLAEPSIRRAQEAIASRHAFKQGAE
>NC_017490.1|WP_004259148.1|430914_431340_+|F0F1-ATP-synthase-subunit-epsilon
MSENVMAIQVITPAGVIYDHHATYILAHTIGGDMGILPNMISTIAGLQISELKVRRPDDVKHVDYIAVNGGIIEVKDSMITVIADSAERNRDIDVPRAERAKLRAEKELEEAKAAHKTDEAKRAEVALHRAINRLNVSKHN
>NC_017490.1|WP_004259151.1|429487_430897_+|F0F1-ATP-synthase-subunit-beta
MSSGKITQVIGPVVDVEFASGATLPEINNALIVYKDVDGVKTKIVLEVALELGDGAVRTIAMESTDGLTRGLEVLDTGKAISVPVGQETLGRVFNVLGDAIDGGEAFAENAERSPIHKKAPSFDELSTANEILVTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEKQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTKQGSVTSIQAIYVPADDYTDPAPATAFAHLDATTNLERRLTQMGIYPAVDPLASSSRALTPEIVGEEHYAVAMEVQRVLQRYKELQDIIAILGMDELSDDEKVLVNRARRIQFFLSQNFNVAETFTGVPGSYVPIEKTVEDFKAILDGKYDSIPEDAFRGVGPIEDVLEKAKKMGY
>NC_017490.1|WP_014024340.1|428546_429428_+|F0F1-ATP-synthase-subunit-gamma
MGASLSEIKSKIASTEKTSHITGAMQMVSAAKLQKSEKIAKTYQVYADKVRQVTTDLVAADRGPSKNPMMTKRPVKKTGYLVITSDRGLVGGYNSNILKSVMNKLREKHQGPEEYCILALGGTGADFFRSRNVELSYELRGLTDQPSFEEVREIVRQAVSRYQNEEFDQLYVCYNHHINSLTSEARMQKMLPITFDESEDSAEEAPVSLVSFELEPSREAILDQLLPQYAESMIYGAIVDAKTAEHAAGMSAMRTATDNAKTVINDLTIQYNRARQAAITQEITEIVAGASAL
>NC_017490.1|WP_004259170.1|427026_428535_+|F0F1-ATP-synthase-subunit-alpha
MAIKANEISSLIKQQIENFTPDFEVAETGVVTYVGDGIARAYGLENAMSGELVEFDNGVYGMAQNLDSTDVGIIVLGDFLSIREGDTVKRTGKIMEIQVGEELIGRVVNALGQPVDGLGDINTGKTRPVEAPASGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAIDAILNQKGKDIICIYVAIGQKESTVRTQVEALRKLGAMDYTIVVTASASQPSPLLYIAPYAGAAMGEEFMYNGKHVLVVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAQLSDDLGGGSMTALPFIETQAGDISAYIATNVISITDGQIFLENDLFYSGIRPAIDAGSSVSRVGGAAQIKAMKKVAGTLRLDLASFRELEAFTQFGSDLDEATQAKLNRGRRTVEVLKQPLHKPLAVEKQVLILYALTHGHLDDVPVEDILDFEEKMFDFFDVNYAELLQVITDTKDLPDEAKLDDAIKAFKKTTNYVK
>NC_017490.1|WP_014024339.1|426433_426961_+|F0F1-ATP-synthase-subunit-delta
MTTVNSQKYSKALLEVAEEKSQLEVILSEVNELTQLFKEDDLASFFGTEVYSTAAKSEVIDSIKENSSPLMKNFLDTVRANGRLADLAEILAEIKNTADDMFRIADVEVISSVKLTETQIEKFVALAKSKFDLNEVTIVNTVDEKIVGGFIVNSRGKIIDASVKSQLAKIAKEIL
>NC_017490.1|WP_004259173.1|425912_426419_+|F0F1-ATP-synthase-subunit-B
MLTTLLETAPNTVLGNIIVVSGAFIILLILVRKFAWGAITGIFEERANKINNDITTAELSKKEAETLLAQRENELAGSKEEAANIIQTANDTAKQNRANILATANEEAANVKKRAQEDIEQERKEALSSVKGDVADISVQIAEKLIGQSLDSQAQSELIDSYIAKLGE
>NC_017490.1|WP_004259176.1|425185_425899_+|F0F1-ATP-synthase-subunit-A
MESTWTFNVGPVTFDGVILYMTALTVLIVFGLIYWASRNMQLKPTGKQNVLEWVVDFINGIGRENLGAKESPKYALMSFTLFSFLLISNIIGLVTKITAPGDISLWRSPTANSTVDLTLAVLVIVLANTLGVKQFGFKGYIKNAFWKEPKAMLPMTIMEEFTNALSMGLRLYGNIFAGEVLLGIIAGMIDSGWFILPVTWILAMAWIAFSIFISSLQAYVFVLLTNLYISHKILAEH
>NC_017490.1|WP_172796625.1|424924_425131_+|F0F1-ATP-synthase-subunit-C
MSIEALKAVAIGISALGAAIGDGLIVSAFINAVARQPEMEGKLRGSMFLGVAFAEGTFFIALAMAFLF
>NC_017490.1|WP_014024338.1|423943_424720_+|esterase-family-protein
MAIINIEYYSEVLGMNRKFNVIYPEASKTGVKDGNDIPVLYLLHGMSGNEDSWLIRTGIDRLIRHSQLAIVMPSTDLGFYTNTNYGMRYFDAIAKELPQVVHNFFPNLSNKREKNFIAGLSMGGYGAFKLALATENFSYAASLSGALDMTDLKEQSAENQAYWTGIFGDLDHFNESENSILYLAEHHTGEKPKLYSWCGEQDYLISGNNRAAQLLEEKGFDLRYEKAPGTHEWYYWTKQIETVLKWLPIDYKEEERLS
>NC_017490.1|WP_014024343.1|433140_434058_+|L-2-hydroxyisocaproate-dehydrogenase
MRKVGIIGLGNVGAMIAQMIVQAGYVDELVLIDKNTAKSKAEAFDMLDAASLLNSHTQITVGDYPDLSDAEVVISALGHIKALDAQDRFQELKINTPMVKAVADEINASGFNGVFLIVTNPNDVIAQLYSQALNLPKNQVFGTGTYLDSARLHRYIAEEAGVDARSVSGYMLGEHGDSQFAAWSTVNIGGVPFEKTAAINNFDLEKIENSARHGGFVVYEGKGYTNFAIAAASVSLMNLILSDAKAAVVCSHYDAELDAYLSTPALVGRDGAKAYPGFIESISKEEADKLKDSAREIQEKIKKFS
>NC_017490.1|WP_004259135.1|434171_434876_+|histidine-phosphatase-family-protein
MVEIYLVRHGKTMFNTIGRAQGWSDTPLTAEGERGAMELGLGFKAKGLKFDRAYSSDSGRTIQTMGFILEYSENKDIPYKMDKRIREWCFGSFDGGYDGELFDGVLPIIFAEKGLQESGKFPSDEELARAIYEVDTAGWAETWEELSGRIMSGFSDMATEAEAAGAKNIVIVSHGMTIASYIKMLRPDKERPHNLDNGSVTHLTFENGKFEVGDIGSMEYRKLGAEIVKNAKKN
>NC_017490.1|WP_014024344.1|434859_435645_+|D-alanyl-D-alanine-carboxypeptidase-family-protein
MQRRTKKRKLKKGRVIGSFIILLAFIGLCVFAVSKLKPQVTKQRAESSQTSSSSSTAESKTTDLPEARRSDWNLVLVNRENPKEELSPELTTVGNVQVDQRIADSLVKFWAAAQAIDPAEHLISAYRSVAYQEQLFNTYVENERVGAAGSVNNTGQPISREQAETNVKTYSQPACSSEHQTGLAVDMSTVDALNQSPEEVVAQVKKIAPDYGFVLRFPEGGKASTGVDYEDWHFRYVGVDNAKYMTKHNLTLEEYLKLLPQ
>NC_017490.1|WP_014024345.1|435678_436083_+|hypothetical-protein
MLNKAYLILYANIALFLYTLMIMAQRLLASPNTFTTVFQNTSRTITGFINKTLAPVAQWQNVIEILLVFLLILLILRFFNVGLWILEIAAVLILVDWGYQYLMHQQNLALLFPLAVMLVSLFSIRFIAKEVGFI
>NC_017490.1|WP_014024346.1|436222_437260_+|heat-inducible-transcriptional-repressor-HrcA
MITERQQQILDLIVSLYAKEHTPVGSKALLEQIKASSATIRNDMKALENLGLIQKEHTSSGRVPSISGYKYFVENVLRLEEFTQNDLFQIMKSFDGEFYRLSDLFERASEVLSRLTGLTSFVLNVPQKEQVLQSFELVTLDNHSMLTVMTLTTGELRTNQFVLPKSMSEHDLQVFTRLIKERLVGKKVLDVHYALRTDIPQIVQRYFKTTGDVLELFESVFADLFTEHLTSSGREYVFDFATDNLSELYKILSDDARMAQEIRELTSTDEMRSVVIDNMSYFANLTLISQKFVIPYRGLGTLTVIGPVEQDYQKTLSTLDLLAKVLSMKLMDYYRYLDGNHYEIS
>NC_017490.1|WP_004259125.1|437293_437836_+|nucleotide-exchange-factor-GrpE
MAEENKEELKKNDQEEEVVEELTEEALEDIVEEEVSELDAAVAKAEEWENKFLRISAEIQNIQRRANEERASILKYRSQDLAKKILPSLDNLERALAVEGLTEDVKKGLEMTRESLINALKEEGVTEVQADGAFDPNFHMAVQTVPADDEHPADHVVQVFQKGYQIHDRILRPAMVVVAQ
>NC_017490.1|WP_004259123.1|437912_439739_+|molecular-chaperone-DnaK
MSKIIGIDLGTTNSAVAVLEGTEAKIIPNPEGNRTTPSVVAFKNGEIQVGDAAKRQAVTNPDTIISIKSKMGTSEKVSAGGKEYTPQEISAMILQNLKATAEAYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGMDKQDKDEKILVFDLGGGTFDVSILELGDGVFDVLSTAGNNKLGGDDFDQAIIDYMVAEFKKENGIDLSQDKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAGAAGPLHLEMTLTRAKFDELTASLVEATREPVRQALSDAGLSTSDIDEVLLVGGSTRIPAVVDLVQKETGKTPNKSVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGSVFTKLIERNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAADNKSLGRFQLTDIPAAPRGVPQIEVTFDIDKNGIVSVKAKDLGTQKEQTIVIKSNSGLSDEEIDKMMKDAEANADADAKRKEEVDTRNEADALVFQTEKTIKELEGKVDEAEVKKAEDAKEELKKALEGEDIADIKAKSEALSEIAQNLAVKLYEQASAEQAAAEGQEAGSEEGPKDDNTVDGDFEEVK
>NC_017490.1|WP_014024347.1|439888_440287_+|Spx/MgsR-family-RNA-polymerase-binding-regulatory-protein
MLKIYTISSNQETKEAERWLYAHKVKFIEVDLLKELVSTEEILRIVSLTEHGVEEIVETETRAYTRLNLNFKDLKLEDFMELLEENATLLKVPLMLDEKQLQIGFDEDKMQRFLEKPSKKVTDLEQQEMHTG
>NC_017490.1|WP_004259114.1|440463_441165_+|DeoR/GlpR-transcriptional-regulator
MLATERKEKIMSLLKEQRTATLEELSTITQASVSTLRRDLNELEEENVLRRVHGGAELQQDLSEELSIFEKSSKNVQEKEKIAALAFEKIKEGDIIYLDAGTTVAPLCHLLNQSGKRVTIVTNSISHLPKLTSENLIVYLLGGRVKRQTDAIIGSSAIAQLSTYRFNLAFIGANAFDEELGAMTPDSEEAAIKTQAIRQSRTSYLLLDSSKIGQTSFIKFAESDQIKLITEKL
>NC_017490.1|WP_004259111.1|441161_442088_+|1-phosphofructokinase
MIYTVTLNPALDYFMDFDQAELGQVNRATETRMLPGGKGIVESRMMSLLKVENTALGFLGGFPGKFIQDYLENIGSQSDFTPIAGTTRINTKIKVNAQEETSFDAAGPDLSDAEIQAFLSKFDKLKNDDIVVFAGTIPKILGEDFYEVLIEKVKARGAQFAIDVDGQKLLKTLKHEPLIIKPNREELEEIYSVKFEVKEDIIPYGQKLLAEGAQNVMISMAGDGALLFTGKETYFAAPIKGELKNSIGAGDSTVAGFLAEWSRSQDALAAFKQGVACGTAKVFSEDMPSESFLKECFEKVTIEKINED

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

271093 : 280840

Streptococcus_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014024245.1\|271093_271483_+	single-stranded DNA-binding protein	A0A1X9I6R5	Streptococcus_phage	1.0e-22	41.2
WP_014024246.1\|271540_272071_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA
WP_003133888.1\|272187_272469_+	co-chaperone GroES	A0A221S386	uncultured_virus	9.4e-15	48.9
WP_003133890.1\|272497_274123_+	chaperonin GroEL	A0A219YK78	uncultured_virus	8.1e-159	58.0
WP_003133892.1\|274174_274987_-	MBL fold metallo-hydrolase	A0A2H4J3R0	uncultured_Caudovirales_phage	1.9e-31	36.9
WP_014024247.1\|274983_276402_-	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	9.6e-31	32.8
WP_003133894.1\|276394_277096_-	response regulator transcription factor	W8CYM9	Bacillus_phage	8.1e-39	38.8
WP_014570927.1\|277306_277936_+	dTMP kinase	M1PSC7	Streptococcus_phage	3.8e-72	63.6
WP_003133898.1\|277961_278825_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	1.7e-67	45.5
WP_003133900.1\|278837_279611_+	stage 0 sporulation family protein	NA	NA	NA	NA
WP_016171014.1\|279635_279977_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	1.7e-13	38.9
WP_014024249.1\|279973_280840_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	2.3e-104	66.6

DBSCAN-SWA_2

332462 : 342077

Bacillus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003133969.1\|332462_333299_+	DegV family protein	A0A0N9SI50	Staphylococcus_phage	4.4e-15	39.1
WP_014024287.1\|333285_334116_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_014024288.1\|334105_334690_+	YpmS family protein	NA	NA	NA	NA
WP_003133973.1\|334807_335083_+	HU family DNA-binding protein	A7KV42	Bacillus_phage	5.4e-23	68.5
WP_035000182.1\|335328_336474_+	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	2.0e-31	29.2
WP_014024290.1\|336543_337464_-	cysteine synthase A	A0A1X9I5F1	Streptococcus_phage	3.9e-110	67.4
WP_014024291.1\|337647_338580_+	LysM peptidoglycan-binding domain-containing protein	Q5ILA5	Bacillus_phage	5.2e-09	34.0
WP_014024292.1\|338680_339307_-	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	3.4e-49	46.9
WP_014570929.1\|339310_341395_-	penicillin-binding protein	NA	NA	NA	NA
WP_003133979.1\|341426_342077_-	Holliday junction resolvase RecU	A0A1C8E9C3	Bacillus_phage	9.8e-23	35.5

DBSCAN-SWA_3

559119 : 570024

Streptococcus_phage(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014024421.1\|559119_559470_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	3.2e-28	55.7
WP_014024422.1\|559500_560361_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	3.2e-90	60.3
WP_014024423.1\|560590_562579_+\|tRNA	methionine--tRNA ligase	A0A1V0S905	Catovirus	1.8e-59	32.0
WP_014024424.1\|562610_563456_-	SDR family NAD(P)-dependent oxidoreductase	A0A0K0KVL6	Prochlorococcus_phage	4.9e-06	29.2
WP_004258747.1\|563586_563826_+	DUF2829 domain-containing protein	A8AT88	Listeria_phage	3.6e-07	37.0
WP_014024425.1\|563818_564538_+	3-oxoacyl-ACP reductase	A0A0N9R355	Chrysochromulina_ericina_virus	9.2e-14	25.9
WP_004258738.1\|564705_565215_+	QueT transporter family protein	E7DN70	Pneumococcus_phage	9.1e-08	31.1
WP_014024426.1\|565269_566055_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_016170985.1\|566207_566990_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_004258727.1\|567107_567533_+	universal stress protein	NA	NA	NA	NA
WP_014024428.1\|567660_570024_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	6.2e-83	49.6

DBSCAN-SWA_4

902111 : 914649

Lactococcus_phage(87.5%)

integrase,holin

attL 902091:902110|attR 909399:909418

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
902091:902110	attL	NA	NA	NA	NA
WP_014024683.1\|902111_903248_-\|integrase	site-specific integrase	Q9AZR0	Lactococcus_phage	3.6e-97	45.1
WP_014024684.1\|903403_903976_-	hypothetical protein	NA	NA	NA	NA
WP_014024685.1\|905539_905770_+\|holin	holin	A0A182BQ79	Lactococcus_phage	1.5e-26	85.5
WP_014024686.1\|905771_906521_+	CHAP domain-containing protein	A0A182BQ78	Lactococcus_phage	1.7e-132	98.8
WP_014024687.1\|907047_907344_+	hypothetical protein	Q9AZG1	Lactococcus_phage	2.3e-40	83.7
WP_014024688.1\|907355_908282_+	DUF4065 domain-containing protein	Q9AZG0	Lactococcus_phage	1.6e-106	62.7
WP_016170921.1\|908991_909204_+	hypothetical protein	A0A182BQ74	Lactococcus_phage	1.5e-33	100.0
WP_004257605.1\|910939_911521_+	transglycosylase	E0YIP1	Lactococcus_phage	8.2e-29	61.4
909399:909418	attR	NA	NA	NA	NA
WP_014024690.1\|911892_914649_+	cation-transporting P-type ATPase	M1HM40	Paramecium_bursaria_Chlorella_virus	7.0e-78	28.7

DBSCAN-SWA_5

1092464 : 1164284

Lactococcus_phage(91.3%)

integrase,capsid,holin,tRNA,portal,protease,head,terminase,tail

attL 1120580:1120602|attR 1160830:1160852

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014024777.1\|1092464_1093808_+\|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	NA	NA	NA	NA
WP_014024776.1\|1093880_1094102_-	hypothetical protein	NA	NA	NA	NA
WP_014024775.1\|1094172_1095234_-	tyrosine recombinase XerS	NA	NA	NA	NA
WP_014024771.1\|1097097_1097481_-	cupin domain-containing protein	NA	NA	NA	NA
WP_014024770.1\|1097680_1098118_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_014024769.1\|1098258_1099263_-	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	2.8e-61	43.3
WP_014024765.1\|1099828_1100071_-	D-alanine--poly(phosphoribitol) ligase subunit DltC	NA	NA	NA	NA
WP_014024764.1\|1100095_1101310_-	D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA	NA	NA	NA
WP_014024763.1\|1101309_1102812_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	A0A2K9L3I8	Tupanvirus	3.2e-40	28.3
WP_080567130.1\|1102824_1102959_-	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA
WP_014024762.1\|1103011_1103953_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_014024761.1\|1104116_1105373_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	5.6e-107	53.3
WP_014024760.1\|1105388_1106195_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	6.6e-45	43.1
WP_004256982.1\|1110429_1110864_-	universal stress protein	NA	NA	NA	NA
WP_014024861.1\|1111109_1111535_-	universal stress protein	NA	NA	NA	NA
WP_004256974.1\|1111701_1111911_+	hypothetical protein	NA	NA	NA	NA
WP_014024862.1\|1112096_1112528_+	DUF1398 family protein	NA	NA	NA	NA
WP_014024865.1\|1112930_1113806_-	cation transporter	NA	NA	NA	NA
WP_014024866.1\|1114021_1114765_+	hypothetical protein	NA	NA	NA	NA
WP_014024867.1\|1114846_1115194_-	YxeA family protein	NA	NA	NA	NA
WP_014024868.1\|1115310_1115661_-	YxeA family protein	NA	NA	NA	NA
WP_014024869.1\|1116028_1116568_+	DUF1440 domain-containing protein	NA	NA	NA	NA
WP_014024870.1\|1116993_1117674_-	CHAP domain-containing protein	NA	NA	NA	NA
WP_014024872.1\|1118559_1119297_+	hypothetical protein	NA	NA	NA	NA
1120580:1120602	attL	NA	NA	NA	NA
WP_016170921.1\|1120929_1121142_-	hypothetical protein	A0A182BQ74	Lactococcus_phage	1.5e-33	100.0
WP_165706963.1\|1121532_1121679_-\|holin	bacteriophage holin	A0A1B1IM92	Lactococcus_phage	6.6e-12	87.5
WP_014024875.1\|1121978_1122170_-	hypothetical protein	A0A182BQ75	Lactococcus_phage	8.6e-28	100.0
WP_014024877.1\|1122422_1122605_+	hypothetical protein	A0A182BQ76	Lactococcus_phage	2.8e-28	100.0
WP_158308674.1\|1123411_1123738_-	hypothetical protein	A0A182BQ77	Lactococcus_phage	2.5e-51	99.0
WP_014024879.1\|1123734_1123989_-	hypothetical protein	A0A182BQ72	Lactococcus_phage	1.4e-36	100.0
WP_014024880.1\|1124434_1125184_-	CHAP domain-containing protein	A0A182BQ78	Lactococcus_phage	2.4e-134	100.0
WP_014024881.1\|1125185_1125416_-\|holin	holin	A0A182BQ79	Lactococcus_phage	4.5e-31	100.0
WP_014024882.1\|1125428_1125650_-	hemolysin XhlA family protein	A0A182BQ80	Lactococcus_phage	7.9e-33	100.0
WP_014024883.1\|1125672_1126584_-	hypothetical protein	A0A182BQ81	Lactococcus_phage	2.9e-129	100.0
WP_014024884.1\|1126555_1126720_-	hypothetical protein	A0A182BQ82	Lactococcus_phage	1.9e-20	100.0
WP_014024885.1\|1126703_1129259_-	hypothetical protein	A0A182BQ83	Lactococcus_phage	0.0e+00	100.0
WP_014024886.1\|1129268_1129634_-	hypothetical protein	A0A182BQ84	Lactococcus_phage	4.9e-64	100.0
WP_014024887.1\|1129647_1134429_-	transglycosylase SLT domain-containing protein	A0A182BQ85	Lactococcus_phage	0.0e+00	100.0
WP_014024888.1\|1134445_1134820_-	hypothetical protein	A0A172LN91	Lactococcus_phage	6.8e-61	100.0
WP_014024889.1\|1134843_1135248_-	hypothetical protein	A0A182BQ86	Lactococcus_phage	6.2e-68	100.0
WP_014024890.1\|1135321_1135747_-	hypothetical protein	A0A182BQ87	Lactococcus_phage	3.6e-74	100.0
WP_014024891.1\|1135759_1136122_-	hypothetical protein	A0A182BQ88	Lactococcus_phage	3.9e-61	100.0
WP_014024892.1\|1136121_1136670_-	hypothetical protein	A0A182BQ89	Lactococcus_phage	6.0e-98	100.0
WP_014024893.1\|1136653_1137007_-	hypothetical protein	A0A182BQ90	Lactococcus_phage	4.6e-59	100.0
WP_014024894.1\|1136987_1137320_-\|head,tail	phage head-tail connector protein	A0A182BQ91	Lactococcus_phage	1.7e-55	100.0
WP_014024895.1\|1137340_1138459_-	Ig-like domain-containing protein	A0A182BQ73	Lactococcus_phage	1.5e-180	100.0
WP_016170918.1\|1138471_1139128_-	DUF4355 domain-containing protein	A0A182BQ92	Lactococcus_phage	7.0e-93	100.0
WP_014024897.1\|1139242_1139500_-	hypothetical protein	A0A182BQ93	Lactococcus_phage	8.3e-42	100.0
WP_014024898.1\|1139563_1140091_-	hypothetical protein	A0A182BQ94	Lactococcus_phage	3.4e-98	100.0
WP_014024899.1\|1140123_1141221_-\|capsid	minor capsid protein	A0A172LN92	Lactococcus_phage	3.3e-204	100.0
WP_014024900.1\|1141226_1141514_-\|protease	ribosomal-processing cysteine protease Prp	A0A182BQ95	Lactococcus_phage	1.3e-48	100.0
WP_016170917.1\|1141514_1141676_-	hypothetical protein	NA	NA	NA	NA
WP_014024901.1\|1141632_1143141_-\|portal	phage portal protein	A0A182BQ97	Lactococcus_phage	2.5e-255	100.0
WP_014024902.1\|1143149_1144385_-\|terminase	PBSX family phage terminase large subunit	A0A182BQ98	Lactococcus_phage	2.8e-244	100.0
WP_014024903.1\|1144374_1144887_-\|terminase	terminase small subunit	A0A182BQ99	Lactococcus_phage	2.7e-84	100.0
WP_014024904.1\|1145409_1145832_-	DUF722 domain-containing protein	A0A182BQA1	Lactococcus_phage	2.7e-58	100.0
WP_014024905.1\|1146454_1146676_-	hypothetical protein	A0A182BQA2	Lactococcus_phage	4.8e-38	100.0
WP_014024906.1\|1146672_1146966_-	hypothetical protein	A0A182BQA3	Lactococcus_phage	7.0e-53	100.0
WP_014024907.1\|1147011_1147704_-	hypothetical protein	A0A172LN93	Lactococcus_phage	4.0e-131	100.0
WP_016170916.1\|1147690_1148059_-	hypothetical protein	A0A182BQA4	Lactococcus_phage	2.2e-64	100.0
WP_014024909.1\|1148061_1148439_-	hypothetical protein	A0A182BQA5	Lactococcus_phage	2.9e-67	100.0
WP_014024910.1\|1148442_1148670_-	helix-turn-helix transcriptional regulator	A0A182BQA6	Lactococcus_phage	5.6e-34	100.0
WP_014024911.1\|1148795_1149146_+	winged helix-turn-helix domain-containing protein	A0A182BQA7	Lactococcus_phage	3.0e-42	100.0
WP_014024913.1\|1149179_1149716_-	DUF1642 domain-containing protein	A0A182BQA8	Lactococcus_phage	2.8e-100	100.0
WP_014024914.1\|1149708_1149903_-	hypothetical protein	A0A182BQA9	Lactococcus_phage	1.0e-28	100.0
WP_014024915.1\|1149880_1150060_-	hypothetical protein	A0A182BQB0	Lactococcus_phage	9.8e-26	100.0
WP_014024916.1\|1150059_1150404_-	hypothetical protein	A0A182BQB1	Lactococcus_phage	6.5e-58	100.0
WP_016170915.1\|1150396_1150774_-	hypothetical protein	A0A182BQB2	Lactococcus_phage	2.8e-62	100.0
WP_016170913.1\|1151137_1151377_-	DUF1031 family protein	A0A182BQB3	Lactococcus_phage	1.8e-38	100.0
WP_014024918.1\|1151363_1151768_-	RusA family crossover junction endodeoxyribonuclease	A0A182BQB4	Lactococcus_phage	1.1e-72	100.0
WP_014024919.1\|1151764_1151914_-	hypothetical protein	A0A182BQB5	Lactococcus_phage	1.4e-17	100.0
WP_014024920.1\|1151897_1152140_-	hypothetical protein	A0A182BQB6	Lactococcus_phage	6.6e-41	100.0
WP_016170912.1\|1152126_1152936_-	helix-turn-helix domain-containing protein	A0A182BQB7	Lactococcus_phage	2.4e-143	100.0
WP_016170911.1\|1152935_1153262_-	HNH endonuclease	A0A182BQB8	Lactococcus_phage	1.0e-57	100.0
WP_014024923.1\|1153365_1153872_-	single-stranded DNA-binding protein	A0A182BQB9	Lactococcus_phage	4.1e-93	100.0
WP_014024924.1\|1153871_1154588_-	AAA family ATPase	A0A182BQC0	Lactococcus_phage	1.5e-133	100.0
WP_014024925.1\|1154590_1155079_-	siphovirus Gp157 family protein	A0A182BQC1	Lactococcus_phage	5.2e-85	100.0
WP_014024926.1\|1155162_1155318_-	hypothetical protein	A0A172LN95	Lactococcus_phage	5.7e-22	100.0
WP_014024927.1\|1155420_1155918_+	hypothetical protein	A0A182BQC2	Lactococcus_phage	2.5e-87	100.0
WP_016170910.1\|1155895_1156129_-	hypothetical protein	A0A182BQC3	Lactococcus_phage	8.0e-36	100.0
WP_004256852.1\|1156272_1156566_-	hypothetical protein	A0A182BQC4	Lactococcus_phage	2.3e-48	100.0
WP_014024929.1\|1156578_1157298_-	phage antirepressor Ant	A0A182BQC5	Lactococcus_phage	1.9e-131	100.0
WP_014024930.1\|1157316_1157460_-	hypothetical protein	A0A182BQC6	Lactococcus_phage	7.1e-19	100.0
WP_014024931.1\|1157567_1157774_-	hypothetical protein	A0A182BQC7	Lactococcus_phage	5.8e-30	100.0
WP_014024932.1\|1158048_1158393_+	helix-turn-helix domain-containing protein	A0A182BQC8	Lactococcus_phage	4.5e-59	100.0
WP_014024933.1\|1158404_1158797_+	hypothetical protein	A0A182BQC9	Lactococcus_phage	1.4e-69	100.0
WP_014024934.1\|1158895_1159474_+	hypothetical protein	A0A182BQD0	Lactococcus_phage	6.2e-61	100.0
WP_014024935.1\|1159598_1160681_+\|integrase	site-specific integrase	A0A172LN96	Lactococcus_phage	1.0e-205	100.0
WP_014024936.1\|1161234_1161984_-	hypothetical protein	NA	NA	NA	NA
1160830:1160852	attR	NA	NA	NA	NA
WP_004256835.1\|1161980_1162868_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.8e-26	37.6
WP_004256834.1\|1163074_1163410_-	putative DNA-binding protein	NA	NA	NA	NA
WP_004256833.1\|1163585_1164284_+	response regulator transcription factor	Q6XM27	Feldmannia_irregularis_virus	9.9e-05	24.8

DBSCAN-SWA_6

1186284 : 1196577

Prochlorococcus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014024956.1\|1186284_1187835_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	2.9e-73	46.0
WP_014024957.1\|1187875_1188418_-	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	3.7e-15	31.2
WP_014024958.1\|1188414_1189428_-	phosphoribosylformylglycinamidine cyclo-ligase	M4QRQ6	Synechococcus_phage	1.2e-62	42.4
WP_014024959.1\|1189420_1190836_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.8e-54	32.7
WP_014024960.1\|1190820_1193037_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	6.1e-157	42.0
WP_014024961.1\|1193033_1193714_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_014024962.1\|1193713_1193956_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_014024963.1\|1194011_1194728_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SEW9	Cyanophage	9.1e-46	45.4
WP_014024964.1\|1194832_1195258_-	ASCH domain-containing protein	NA	NA	NA	NA
WP_016170904.1\|1195274_1195736_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014024966.1\|1195737_1196577_-	thymidylate synthase	A0A249XZR6	Enterococcus_phage	5.8e-84	57.8

DBSCAN-SWA_7

1309772 : 1320391

Bacillus_virus(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014025051.1\|1309772_1312256_-	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	3.2e-98	34.3
WP_014570984.1\|1312301_1312763_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004258278.1\|1312764_1313586_-	3'-5' exonuclease	A0A0K2SUJ2	Clostridium_phage	1.5e-20	34.9
WP_014025053.1\|1313621_1315559_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	1.8e-125	42.9
WP_014025054.1\|1315787_1316426_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_016170892.1\|1316533_1316752_+	glutaredoxin-like protein NrdH	C3U2K9	Lactococcus_phage	1.5e-12	45.1
WP_004258293.1\|1316748_1317168_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2R3ZXT9	Staphylococcus_phage	1.1e-06	28.7
WP_014025056.1\|1317221_1319390_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	1.1e-248	59.0
WP_014025057.1\|1319404_1320391_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	1.0e-116	66.2

DBSCAN-SWA_8

1741220 : 1787043

Lactococcus_phage(35.71%)

bacteriocin,integrase,tRNA,protease,head

attL 1769743:1769769|attR 1783274:1783300

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003133290.1\|1741220_1742009_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_014025411.1\|1742198_1742735_+	energy-coupled thiamine transporter ThiT	NA	NA	NA	NA
WP_014025412.1\|1742747_1743227_+\|tRNA	aminoacyl-tRNA deacylase	NA	NA	NA	NA
WP_003133283.1\|1743335_1743695_+	DUF3397 domain-containing protein	NA	NA	NA	NA
WP_003133281.1\|1743767_1743983_-	hypothetical protein	A0A223LEC3	Bacillus_phage	9.1e-10	46.8
WP_003133278.1\|1744029_1745295_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_014025413.1\|1745526_1746246_+	hypothetical protein	NA	NA	NA	NA
WP_014571002.1\|1746337_1748431_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.2e-48	30.6
WP_003133270.1\|1748484_1750218_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.5e-30	25.2
WP_014025415.1\|1750535_1751750_+	cation transporter	NA	NA	NA	NA
WP_003133267.1\|1751751_1752210_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_014025416.1\|1752304_1753498_+	tetracycline resistance MFS efflux pump	NA	NA	NA	NA
WP_003133264.1\|1753509_1754049_-	folate family ECF transporter S component	NA	NA	NA	NA
WP_014025417.1\|1754347_1756888_-	M1 family metallopeptidase	A0A0P0IY26	Acinetobacter_phage	8.7e-67	25.7
WP_014025418.1\|1757122_1757923_+	hypothetical protein	NA	NA	NA	NA
WP_014025419.1\|1757932_1758409_+	effector binding domain-containing protein	NA	NA	NA	NA
WP_003133260.1\|1758444_1759464_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	4.4e-62	41.8
WP_014025420.1\|1759465_1759900_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA
WP_017371110.1\|1759889_1760426_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA
WP_014025421.1\|1760409_1761120_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_014025423.1\|1761542_1761773_+	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA
WP_014025424.1\|1761893_1763582_+	ribonuclease J	NA	NA	NA	NA
WP_014025425.1\|1763700_1764162_+	VanZ family protein	NA	NA	NA	NA
WP_014025426.1\|1764175_1765210_-	adenosine deaminase	NA	NA	NA	NA
WP_016171059.1\|1765388_1766192_-	hypothetical protein	NA	NA	NA	NA
WP_014025428.1\|1766275_1766710_-	SprT family protein	NA	NA	NA	NA
WP_014025429.1\|1766690_1768823_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
WP_014025430.1\|1768919_1769531_+	nitroreductase family protein	NA	NA	NA	NA
1769743:1769769	attL	NA	NA	NA	NA
WP_003133243.1\|1769775_1770966_-\|integrase	site-specific integrase	A0A1X9I6A9	Streptococcus_phage	3.9e-86	44.2
WP_003133241.1\|1771288_1772179_-	Abi family protein	NA	NA	NA	NA
WP_003133240.1\|1772236_1772548_-\|bacteriocin	bacteriocin immunity protein	Q9AZK7	Lactococcus_phage	6.8e-14	47.0
WP_003133238.1\|1772569_1772806_-	hypothetical protein	NA	NA	NA	NA
WP_014025431.1\|1772871_1773162_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003133234.1\|1773499_1773748_-	hypothetical protein	NA	NA	NA	NA
WP_003133232.1\|1774249_1774951_-	hypothetical protein	Q9AZN3	Lactococcus_phage	3.2e-19	73.2
WP_003133230.1\|1775102_1775324_+	transcriptional regulator	NA	NA	NA	NA
WP_003133229.1\|1775531_1776230_+	hypothetical protein	NA	NA	NA	NA
WP_016171062.1\|1776302_1776596_+	hypothetical protein	NA	NA	NA	NA
WP_016171063.1\|1776595_1776778_+	DUF1655 domain-containing protein	Q9AZH6	Lactococcus_phage	1.9e-16	71.7
WP_003133227.1\|1777071_1777353_+	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	5.9e-09	36.7
WP_016171065.1\|1777551_1777740_+	hypothetical protein	NA	NA	NA	NA
WP_014025434.1\|1777739_1778069_+	HTH domain-containing protein	Q9AZI7	Lactococcus_phage	3.1e-25	56.2
WP_016171066.1\|1778065_1779775_+	hypothetical protein	R9QPR8	Lactococcus_phage	2.7e-157	52.2
WP_014025436.1\|1780255_1781119_+	hypothetical protein	NA	NA	NA	NA
WP_014025437.1\|1781175_1781355_+	hypothetical protein	NA	NA	NA	NA
WP_003133222.1\|1781486_1781675_+	hypothetical protein	NA	NA	NA	NA
WP_035000265.1\|1781697_1781913_+	hypothetical protein	NA	NA	NA	NA
WP_014025438.1\|1781920_1782433_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.4e-16	34.0
WP_016171067.1\|1782794_1783088_+	hypothetical protein	NA	NA	NA	NA
WP_003133217.1\|1783396_1784008_-	30S ribosomal protein S4	NA	NA	NA	NA
1783274:1783300	attR	NA	NA	NA	NA
WP_014571003.1\|1784210_1785566_-	amino acid permease	NA	NA	NA	NA
WP_014025440.1\|1785834_1786284_-	hypothetical protein	NA	NA	NA	NA
WP_014025441.1\|1786398_1787043_-\|bacteriocin	putative bacteriocin export ABC transporter	G9BWD6	Planktothrix_phage	3.2e-18	31.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage