CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_017576	Streptococcus gallolyticus subsp. gallolyticus ATCC 43143, complete genome	2 crisprs	DEDDh,cas3,csa3,csm6,WYL,csn2,cas2,cas1,cas9,DinG	0	36	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_017576_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017576_1

1477224-1477919

TypeII

Consensus_repeat	Method
TGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CRISPRCasFinder
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CRT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	PILER-CR
TGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	PILER-CR

10 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NC_017576_1

>merge|NC_017576|1|1477224-1477919|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
TTAGTTACGGTTACTTAAATCTTGAGAGTACAAAAACGGTAGAACAGCAATTGTACAACCTTGACCAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACGTAACGTCCGAATCATTGGGGTCTGGAAAGGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTCTAAACTTTTTAGATGAAACAGCTAGACTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACACAAACTATAGTTTAACAGCTAAGGAAGTTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTTAAGTCGCCACATATTAACGCCTGCTGAAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTGACAATTGAAAACGCAAACGAGCAAATATGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTTGAATAAATGGTTTCAAAAGCATTATCATGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACAAAATGGGTGGGGCTATTCCTAGCCAAATTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTTATAAAAACGTACATCTTCATTACGTCGTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACCAGACCGCATTTCATTCCAAAGCGGTGGTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC

>NC_017576|1|1|1477224-1477919|CRISPRCasFinder
TTAGTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GGTAGAACAGCAATTGTACAACCTTGACC
AGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GTAACGTCCGAATCATTGGGGTCTGGAAA
GGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TCTAAACTTTTTAGATGAAACAGCTAGAC
TGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACAAACTATAGTTTAACAGCTAAGGAAGT
TGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTAAGTCGCCACATATTAACGCCTGCTGA
AGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TGACAATTGAAAACGCAAACGAGCAAATA
TGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTGAATAAATGGTTTCAAAAGCATTATCA
TGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AAAATGGGTGGGGCTATTCCTAGCCAAAT
TGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTATAAAAACGTACATCTTCATTACGTCG
TGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CAGACCGCATTTCATTCCAAAGCGGTGG
TGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC

>NC_017576|1|1|1477225-1477919|CRT
TAGTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GGTAGAACAGCAATTGTACAACCTTGACCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GTAACGTCCGAATCATTGGGGTCTGGAAAG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TCTAAACTTTTTAGATGAAACAGCTAGACT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACAAACTATAGTTTAACAGCTAAGGAAGTT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTAAGTCGCCACATATTAACGCCTGCTGAA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TGACAATTGAAAACGCAAACGAGCAAATAT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTGAATAAATGGTTTCAAAAGCATTATCAT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AAAATGGGTGGGGCTATTCCTAGCCAAATT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTATAAAAACGTACATCTTCATTACGTCGT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CAGACCGCATTTCATTCCAAAGCGGTGGT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC

>NC_017576|1|1|1477291-1477524|PILER-CR
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GTAACGTCCGAATCATTGGGGTCTGGAAAG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TCTAAACTTTTTAGATGAAACAGCTAGACT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACAAACTATAGTTTAACAGCTAAGGAAGTT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTTAAGTCGCCACATATTAACGCCTGCTGAAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTGACAATTGAAAACGCAAACGAGCAAATATGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTGAATAAATGGTTTCAAAAGCATTATCA
TGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AAAATGGGTGGGGCTATTCCTAGCCAAAT
TGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTATAAAAACGTACATCTTCATTACGTCG
TGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CAGACCGCATTTCATTCCAAAGCGGTGG


>NC_017576|1|2|1477620-1477919|PILER-CR
	GTAACGTCCGAATCATTGGGGTCTGGAAAG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TCTAAACTTTTTAGATGAAACAGCTAGACT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACAAACTATAGTTTAACAGCTAAGGAAGTT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTTAAGTCGCCACATATTAACGCCTGCTGAAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTGACAATTGAAAACGCAAACGAGCAAATATGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTGAATAAATGGTTTCAAAAGCATTATCA
TGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AAAATGGGTGGGGCTATTCCTAGCCAAAT
TGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTATAAAAACGTACATCTTCATTACGTCG
TGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CAGACCGCATTTCATTCCAAAGCGGTGG
TGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_017576.1\|WP_012962158.1\|1468267_1468729_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NC_017576.1\|WP_012962172.1\|1487251_1487917_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NC_017576.1\|WP_012962160.1\|1469438_1470809_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|225174
NC_017576.1\|WP_012962170.1\|1483936_1484353_-\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NC_017576.1\|WP_012962156.1\|1465640_1466246_-\|transglutaminase-family-protein	unknown	unknown	gnl\|CDD\|224224
NC_017576.1\|WP_012962166.1\|1477983_1479033_-\|CRISPR-associated-protein-Cas7	csn2	cd12217_csn2_CAS-II-A	gnl\|CDD\|213410
NC_017576.1\|WP_012962171.1\|1486575_1486956_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|374224
NC_017576.1\|WP_014620183.1\|1479029_1479353_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NC_017576.1\|WP_012962164.1\|1473728_1475012_-\|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|235037
NC_017576.1\|WP_012962161.1\|1470918_1472352_-\|LCP-family-protein	unknown	unknown	gnl\|CDD\|224235
NC_017576.1\|WP_012962163.1\|1473259_1473736_-\|shikimate-kinase	unknown	unknown	gnl\|CDD\|234654
NC_017576.1\|WP_012962169.1\|1480438_1483831_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|273840
NC_017576.1\|WP_012962159.1\|1468758_1469277_-\|hypothetical-protein	unknown	unknown	unknown
NC_017576.1\|WP_014620182.1\|1475233_1477069_-\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NC_017576.1\|WP_012962162.1\|1472438_1473263_-\|prephenate-dehydratase	unknown	unknown	gnl\|CDD\|237013
NC_017576.1\|WP_012962168.1\|1479354_1480266_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NC_017576.1\|WP_009854536.1\|1486967_1487156_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NC_017576.1\|WP_009854538.1\|1487903_1488248_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NC_017576.1\|WP_012962157.1\|1467347_1468235_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NC_017576.1\|WP_014620188.1\|1488244_1489111_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851

Protein	Function_ID	Function_description	E-value
NC_017576.1\|WP_012962158.1\|1468267_1468729_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.1315e-10
NC_017576.1\|WP_012962172.1\|1487251_1487917_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	2.99246e-116
NC_017576.1\|WP_012962160.1\|1469438_1470809_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	1.0745e-179
NC_017576.1\|WP_012962170.1\|1483936_1484353_-\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	1.43302e-77
NC_017576.1\|WP_012962156.1\|1465640_1466246_-\|transglutaminase-family-protein	gnl\|CDD\|224224	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism].	2.82155e-16
NC_017576.1\|WP_012962166.1\|1477983_1479033_-\|CRISPR-associated-protein-Cas7	gnl\|CDD\|213410	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. This family of Csn2 proteins includes Stu0660, the proteins are larger than other (canonical) Csn2 proteins as they have an additional alpha-helical C-terminal domain. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.54678e-150
NC_017576.1\|WP_012962171.1\|1486575_1486956_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	2.52181e-16
NC_017576.1\|WP_012962157.1\|1467347_1468235_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	3.41318e-10
NC_017576.1\|WP_012962164.1\|1473728_1475012_-\|3-phosphoshikimate-1-carboxyvinyltransferase	gnl\|CDD\|235037	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	0
NC_017576.1\|WP_012962161.1\|1470918_1472352_-\|LCP-family-protein	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	6.80408e-55
NC_017576.1\|WP_012962163.1\|1473259_1473736_-\|shikimate-kinase	gnl\|CDD\|234654	PRK00131, aroK, shikimate kinase; Reviewed.	4.94558e-59
NC_017576.1\|WP_012962169.1\|1480438_1483831_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|273840	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.	0
NC_017576.1\|WP_014620182.1\|1475233_1477069_-\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NC_017576.1\|WP_012962162.1\|1472438_1473263_-\|prephenate-dehydratase	gnl\|CDD\|237013	PRK11898, PRK11898, prephenate dehydratase; Provisional.	1.39141e-151
NC_017576.1\|WP_012962168.1\|1479354_1480266_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	7.18224e-124
NC_017576.1\|WP_009854536.1\|1486967_1487156_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	8.16808e-15
NC_017576.1\|WP_009854538.1\|1487903_1488248_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.71482e-48
NC_017576.1\|WP_014620183.1\|1479029_1479353_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.44988e-29
NC_017576.1\|WP_014620188.1\|1488244_1489111_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.36369e-129

>NC_017576.1|WP_014620182.1|1475233_1477069_-|elongation-factor-4
MDIQELKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFSYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRQEIEDVIGLDASEAVLASAKAGIGIEEILEQIVEYVPAPAGDVEAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQLMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYIAASIKTVADTRVGDTVTLAENPAEAPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVNTTDGEMLEVSNPSEFPDPTKVASIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDENRVNVIYQIPLAEIVFDFFDKLKSSTHGYASFDYEISEYRKSKLVKMDILLNGDKVDALSFIVHNEFAYERGKLIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDNSKK
>NC_017576.1|WP_012962164.1|1473728_1475012_-|3-phosphoshikimate-1-carboxyvinyltransferase
MKLLTNVSQLKGTLRVPGDKSISHRSIMFGSLAKGTTTVHDILRGEDVLSTMQVFRDLGVDIQDDGNIVTITGVGFDGLKAPKNKLDMGNSGTSIRLISGVLAGQDFTVEMFGDDSLSKRPMDRVTIPLRQMGVEVSGQTDRDLPPLTMRGSKALKPIHYQLPVASAQVKSALIFAALQADGESVIIEKEKTRNHTEDMIVQFGGAIDVNGKEIRIKGGQEFTGQDVVVPGDISSAAFWLVAGLIVPNAKVTLENVGINETRTGIIDVIKEMGGKMTISNVDEIAKSATITVETSELHGVEIGGEIIPRLIDELPIIALLATQANGTTIIRDAEELKVKETDRIQVVADALNAMGADITPTDDGMIIKGKTPLHGAKVNTFGDHRIGMMTAIAALLVSDGDVELERAEAINTSYPSFFNDLEVLSRG
>NC_017576.1|WP_012962163.1|1473259_1473736_-|shikimate-kinase
MARIIIGFMGSGKSTISSLLDENYIDMDALITERIGMSIADFFAKEGEAKFREIESQVLAELADSDQVISTGGGVVINPINREILAKNPETIYLKSDFETLYDRIEHDTENIRPLFVNNSKEAFKEIFDGRQEMYEAAANRIIDVAGKTPEEIVEEIG
>NC_017576.1|WP_012962162.1|1472438_1473263_-|prephenate-dehydratase
MKVGYLGPSGSFTHNVAVKAFPEANRMPFANITEVIKSYEEGFVDYAIIPVENSIEGSVHETLDYLFHQAEIEAIAEIIQPIKQQLLATTQTKKIEKIFSHPQAIAQGKKYIKAHYPAAKIEMTASTAYAARFIAEHPEENFAAIAPVAAAKEYGLEIIAKDIQEMDENYTRFWVLGHQKRSFDLAKLNQKVSLALTLPDNLPGALYKALSVFAWRGIDLTKIESRPLKTALGEYFFIVDVENKNDTLVSFALEELSVLGIDYKILGRYDVYKL
>NC_017576.1|WP_012962161.1|1470918_1472352_-|LCP-family-protein
MARSNLSRHEELRYEYLLSNLEYLSAREKQEFDYLYNKKQASEISEPPRSQPSSAYNDNYYDDYYDDAYDNQVDYYDDDNWTSQGLPKYPEEKKQPKRSFRRTSEQQAEILPTYQDNYDEAFYQELEPVTPKKAKKSKKKRRKIRIKRLLKLLGFLVILVMVGMIYMFFKGVNDVSSGETNYTAAVTETFNGEDSDDGTNILILGSDQRITQGSSDARTDTIMVMNIGNSDEKIKLVSFMRDTLVNIDGVSYNAYSNDQKLNVAFNIGEQDDNQGAELMRQTLKDNFDINIKYYVMVDFETFAEAIDTLFPNGVEIDAKFGTVDGQAVSSVEVPDDLNMQADGTVPNQTIEVGTQKMDGRTLLNYARFRKDDDGDYGRTQRQQQVISAIVNQIKDPSKLFTGSAAIGKIYALTSTNVSYPFLLKEGLSVITSGQNGIEQTTIPAEGDWTDDYDMYGGLGIAIDFDKYQEELKELGLR
>NC_017576.1|WP_012962160.1|1469438_1470809_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MLSKNAIVDAEITDLSHEGAGVAKVDGFVFFVENALPGEKIKMRVLKVKKNIGFGKVEEYVTVSEHRNQDLNVDYLRTGIADFGHLAYAEQLKFKRKQVMDNLYKTAGISDVEVAETLGMAHPYAYRNKAQVPVRRVNGQLETGFFRKHSHDLMPISDYYIQNKEIDRLINFTRDLLRRFDLKPYDEKGQTGLIRNLVVRRGHYSGEMMLVFVTTRPKIFRIEQIIEKIVVEFPTVKSIVQNINDKNTNAIFGNEFKTLYGKDTIVDSMLGNQYEISARSFYQVNTEMAERLYQTAIDFSDLTPEDIVIDAYSGIGTIGLSFAKNVKAVYGVEVIEEAVEDAKRNAALNGITNAHYVADSAEHAMATWSKDGIKPSVILVDPPRKGLTENFIKASVAMQPEKITYISCNPATMARDIKLYQELGYKLQKVQPVDLFPNTHHVEAVSLLVRADGTAK
>NC_017576.1|WP_012962159.1|1468758_1469277_-|hypothetical-protein
MGLLDFFKKKKRLTSSDVLDDESYIKEIRHCSQEAWHQYDVLLAARGYGWKGMLDWASYMSKADLMNISTITYSSLPGSKEIECIESFRQNENDFFKMQELKDEQSSLATGGESKTLKVPIKIVWFNQTRTLRFFTLFLDDEKLMERYIETMIRRTFLTEDAMKLAKSGKID
>NC_017576.1|WP_012962158.1|1468267_1468729_-|GNAT-family-N-acetyltransferase
MKLKEIIDYTEKQDITRFVLEALPEWFGIPEAREHYIKESTKCPFIAAYDKKHLVGFVYLKETGRDTVELFVMGVLKEYHRQGVGKALVLKAKEIATEKGYTFLQVKTVQMGKYDSYDSTNRFYLSLGFKEFEVFPTLWDDCNPCQIYVMALE
>NC_017576.1|WP_012962157.1|1467347_1468235_-|CPBP-family-intramembrane-metalloprotease
MNKGYSRKEVQRYLLWTFALAWLMQIVVAIVYHMGNTLFVQLLLSIMMFTPLFGVLLTKHHLKGLGWKFQFKGNAKVFLITWFAPLLLTVLGAILYFMIFPKQFDLSGQYYVASYNGKEALAQLQAKGISYPLLVLINTFACITYAPVINAMLAIGEEVGWRGFLYPQLKAKYGKNKGRLLGGIIWGIWHWPIIGLIGYEYGTDYLGFPIVGMLIFCIFTVTSGVLCDWVYEKSKSIWFPAICHGAINAVTNLPLMVCIVNTGAMTLLGPALIGIVSGIPLFILAMFLFFKTKQT
>NC_017576.1|WP_012962156.1|1465640_1466246_-|transglutaminase-family-protein
MNQAYLEATKYVDYDHPKIQQQARQLKKESSDEIDLVKNTFQFVRDKISHSWDVQDSRVTVSASDCLREGVGICWAKANLVAALLRANGIPSGFSYQRLILGSTPDTGYCIHALNTAYLDSLGKWLRLDARGNKKNVHAEFSLDEEKLAFYPNAEGEIDYHDNHANPDQGLMTVLEHSTDAIDMYLHHLPDSLSNDIKELK
>NC_017576.1|WP_012962166.1|1477983_1479033_-|CRISPR-associated-protein-Cas7
MRLHFTHPYKDNLDINFGQFTQIIGQNQQLKYYMWQIFMWYFDGKKYSEEDLSLFNQEEPEILCEGKSLKRNSFSVISISDIQDLLEQMSYKRGTVACDFLKLHLNTVDVMTEVDEINDKLDKISLTVNHNLDLSIKDVTYHTESCVVTSEQLLSKYFQPYFNYQGRNISFEFVDNETKVMFLLKMLQERLSNDTNNILLIFKNMDDYLDYSSFITICKTITQMTEKFPNFYCTIFPSNESYLYVTKETIEHVTIVSDFIESLFDLDFMYERFIGRYPSNNIPSKSEFLILLQKNASYLFSDQISYISLGISDMVAIKILNSLYQYDKSVVYPIPKIDPLEISFLKDRD
>NC_017576.1|WP_014620183.1|1479029_1479353_-|CRISPR-associated-endonuclease-Cas2
MRYAAMRLLCFFDLPMETAQEKRVYRNFRKELIANGFEMLQFSVYYRTCPNRSFANKFYKRLQQSNLPAGNVRLLAVTEKQFSEMTLIVGGETKQEEVVSDNKLVVI
>NC_017576.1|WP_012962168.1|1479354_1480266_-|type-II-CRISPR-associated-endonuclease-Cas1
MTWRVVHVNQSEKMRLKLDNIVIKKLGEEYTIPLSDISIIVAEGGDTVVTLRLLSALSKYNIALIVCDNQHLPTGIYHAPNGHSRAYKRLQKQLEWSQEQKDKLWQIVTYFKINNQQDVLSIFERDIDAIQLLADYKDNIELGDKTNREGHAAKVYFNELFGKQFTRVTQQEADVINAGLNYGYAIFRAQMARIIEGYGLNPLVGIFHRNEYNQFNLVDDLMEPFRQIVDVWVYQNLRDKEYLKYEYRLNLTNLLNAKIKYGNENCTVTGAMDKYVQGFIKCIDKKDTSKFFCPVVSSLELES
>NC_017576.1|WP_012962169.1|1480438_1483831_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MTNGKILGLDIGIASVGVGIIEAKTGKVVHANSRLFSAANAENNAERRGFRGSRRLNRRKKHRVKRVRDLFEKYEIVTDFRNLNLNPYELRVKGLTEQLTNEELFAALRTISKRRGISYLDDAEDDSTGSTDYAKSIDENRRLLKTKTPGQIQLERLEKYGQLRGNFTVYDENGEAHRLINVFSTSDYEKEARKILETQADYNKKITAEFIDDYVEILTQKRKYYHGPGNEKSRTDYGRFRTDGTTLENIFGILIGKCSFYPDEYRASKASYTAQEYNFLNDLNNLKVPTETGKLSTEQKEALVEFAKSTATLGPAKLLKEIAKILDCKVDEIKGYREDDKGKPDLHTFEPYRKLKFNLDSVNIDDLSREVLDKLADILTLNTEREGIEDAIRHNLPNQFTEGQISEIIKVRKSQSTAFNKGWHSFSAKLMNELIPELYATSDEQMTILTRLEKFKVNKKSSKNTKTIDEKEVTDEIYNPVVAKSVRQTIKIINAAVKKYGDFDKIVIEMPRDKNADDEKKFIDKRNKENKKEKDDALKRAAYLYNGTDKLPDEVFHGNKQLETKIRLWYQQGERCLYSGKPIPIQELVHNSNNFEIDHILPLSLSFDDSLANKVLVYAWTNQEKGQKTPYQVIDSMDAAWSFREMKDYVLKQKGLGKKKRDYLLTTENIDKIEVKKKFIERNLVDTRYASRVVLNSLQSALRELGKDTKISVIRGQFTSQLRRKWKIDKSRETYHHHAVDALIIAASSQLKLWEKQDNPMFVDYGNNQVVDKQTGEILSVSDDEYKELVFQPPYQGFVNMISSKGFEDEILFSYQVDSKYNRKVSDATIYSTRKAKIGKDKKEETYVLGKIKDIYSQNGFDTFIKKYNKDKTQFLMYQKDPLTWENVIEVILRDYPTTKKSEDGKNDVKCNPFEEYRRENGLVCKYSKKGKGTPIKSLKYYDKKLGNCIDITPEGSKNEVVLQSLNPWRADVYFNPETLKYELLGLKYSDLSFEKGTGKYHISQEKYDVIKEKEGIGKKSEFKFTLYRNDLILIKDTASGEQEIYRFLSRTMPNVKHYAELKPYDKEKFDNVQELVEALGEADKVGRCIKGLNKSNLSIYKVRTDVLGNKYFVKKEGDKPKLDFKNNKK
>NC_017576.1|WP_012962170.1|1483936_1484353_-|nucleoside-diphosphate-kinase
MEKTFFMIKPDGVKRGLVGEVLHRIERRGFTIEKLEMRMATPELLEKHYVDLVDRPFFPLIVDFMTSGPVITGVMSGNEVITSWRTMMGATNPKEALPGTIRGDYAQAPDEGGATFNIVHGSDSSESVEREIALWFGE
>NC_017576.1|WP_012962171.1|1486575_1486956_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MLKSYPAIFHKEGDGSFWVEFPGFGGGTEGDDVEEAMKNAREMLESSLAAYLDEGLELPKVVNMSELSVEDGFITLIQADPSPYLKSTKAIRKNVTVPEWLVRLADRENVNYSEVLTQALEKKLQL
>NC_017576.1|WP_009854536.1|1486967_1487156_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MPLTGRELAKLAVLKGWKEVRVKGSHHQFKKDGVPYILTIPIHGNKVLGVGLEKKILKDIGL
>NC_017576.1|WP_012962172.1|1487251_1487917_-|type-II-A-CRISPR-associated-protein-Csn2
MMKINFPILDEPIEILDATILTVEDVTVFSNLVRQFYSYSEECDLKLFDKKLRSLKVSELLLVTDIFGFDVNSQSMLKLIHADLESQLNDKPEVKSMIEQLANTITELLSYECLENELDLEYDEITILELIKALGVKIETQSDTIFEKCFEILQVYNYLSKKKLLIFVNSGAYLTKNEMEKLIEYIKLSNQKVLFLEPRRLYDFPQYVLDSDYFLIAENMN
>NC_017576.1|WP_009854538.1|1487903_1488248_-|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTETAEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNSANKAMIDRLQANNPKKGSITLLTVTEKQFARMIYLNGERNTSVANSDRRLVFLGEDYSDEN
>NC_017576.1|WP_014620188.1|1488244_1489111_-|type-II-CRISPR-associated-endonuclease-Cas1
MGWRTVIVNEHSKLSYKNNHLIFKDAYHTEMIHLEEIDILLLETTNIVLTTMLIERLVERNILIIFCDEKRLPTAMLTPYYGRHDSSLQLTNQIAWDDDVKCDVWTTIIAQKILNQSMYLGECSFFEKSQSIMELYHGLEPFDPSNREGHSARIYFNTLFGNDFSREQDNDINAGLDYGYTLLLSMFARELVVCGCMTQFGLKHANQFNQFNLASDIMEPFRPIVDRIVYENRNASFVKIKRELFTMFDETYSYNHKEMFLNNIVSDYTKKVVKALNHGGKGVPEFRI

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Crispr_ID: NC_017576_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017576_2

1484496-1486444

TypeII

II-A

Consensus_repeat	Method
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	CRISPRCasFinder
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	CRT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	PILER-CR

29 spacers

cas9,cas1,cas2,csn2

The CRISPR arrays of NC_017576_2

>merge|NC_017576|2|1484496-1486444|CRISPRCasFinder,CRT,PILER-CR
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTTAACAGTTAGTTTATTATTAACAATATTAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACCGTGTGCCATAAGATTGGTGTTGAGGTGTTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTGACCAGCAGTTAGTTTATCCTGTTTTGTGGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACACCCCATGACGAATTATATCCCTCATTACTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACGTAAGTTTATCCCATACTCTAAATTTTGGTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAATGTTTGCAAGAGGTTAACACCTGCTTGTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTTATTTTTTATGTCGCTGTCAATGTTAGCTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAGATGAAGATTTCCCTTTACCACCACTTAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACACTCAATTTGAAGTTGAATGTTGCCAAGTGGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTTGAACTCAAACAGACATTTGAAGAATGGTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTTGAACTCAAACAGACATTTGAAGAATGGTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTTGAACTCAAACAGACATTTGAAGAATGGTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTGTATAAAAGCTTTAACACTAACGTTGTTTGTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAAGTCGCCACCAGAGTTAAAAGTTTTAGCTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAGAGCTGAAATGTAGTTAAATGATTTTCCGGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACGCGTTTTAAGCTCTTGCATATAATCTTCTGGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACGATAGATGCATCGCCAACCGCCCAAGTTAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACGTGCATCGTTGATAAATTGCGTTTGTTGATGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTATGGTTACCACACCTCTGATGATTGTGCTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTAGTCAGTAGCTCCTTTTTTGTTATTATTTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAAATTAATTTTCACAGTAAAAACCTACAGCGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACGCCGCTTTCTGAACTTCGACACGTACAGCTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACACCTCCGCCAATCAATGTGCCTAGTGGTTTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACACTCTAATAGCCAAAGTACGGTCATTTGATGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACACAATTCATGTTTTTAACCTGAAAATCAGCGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAGGTGAGGTTGATAATATTGAAACAATCAAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACTAACGACCTTTGATTTCTGTCAATTGACCTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACAGTGTATTTAGTCGGATCCGTGCTAGCAGTGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACGTAAAAGATACCTTTTGAGTAACTGTTTCAGTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

>NC_017576|2|2|1484496-1486444|CRISPRCasFinder
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTAACAGTTAGTTTATTATTAACAATATTA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	CGTGTGCCATAAGATTGGTGTTGAGGTGTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TGACCAGCAGTTAGTTTATCCTGTTTTGTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACCCCATGACGAATTATATCCCTCATTACT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GTAAGTTTATCCCATACTCTAAATTTTGGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AATGTTTGCAAGAGGTTAACACCTGCTTGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTATTTTTTATGTCGCTGTCAATGTTAGCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGATGAAGATTTCCCTTTACCACCACTTAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACTCAATTTGAAGTTGAATGTTGCCAAGTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTGAACTCAAACAGACATTTGAAGAATGGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTGAACTCAAACAGACATTTGAAGAATGGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTGAACTCAAACAGACATTTGAAGAATGGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TGTATAAAAGCTTTAACACTAACGTTGTT
TGTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAGTCGCCACCAGAGTTAAAAGTTTTAGCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGAGCTGAAATGTAGTTAAATGATTTTCCG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GCGTTTTAAGCTCTTGCATATAATCTTCTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GATAGATGCATCGCCAACCGCCCAAGTTAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GTGCATCGTTGATAAATTGCGTTTGTTGAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TATGGTTACCACACCTCTGATGATTGTGCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAGTCAGTAGCTCCTTTTTTGTTATTATTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAATTAATTTTCACAGTAAAAACCTACAGC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GCCGCTTTCTGAACTTCGACACGTACAGCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACCTCCGCCAATCAATGTGCCTAGTGGTTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACTCTAATAGCCAAAGTACGGTCATTTGAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACAATTCATGTTTTTAACCTGAAAATCAGC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGGTGAGGTTGATAATATTGAAACAATCAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAACGACCTTTGATTTCTGTCAATTGACCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGTGTATTTAGTCGGATCCGTGCTAGCAGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GTAAAAGATACCTTTTGAGTAACTGTTTCA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

>NC_017576|2|2|1484496-1486444|CRT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTAACAGTTAGTTTATTATTAACAATATTA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	CGTGTGCCATAAGATTGGTGTTGAGGTGTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TGACCAGCAGTTAGTTTATCCTGTTTTGTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACCCCATGACGAATTATATCCCTCATTACT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GTAAGTTTATCCCATACTCTAAATTTTGGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AATGTTTGCAAGAGGTTAACACCTGCTTGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTATTTTTTATGTCGCTGTCAATGTTAGCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGATGAAGATTTCCCTTTACCACCACTTAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACTCAATTTGAAGTTGAATGTTGCCAAGTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTGAACTCAAACAGACATTTGAAGAATGGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTGAACTCAAACAGACATTTGAAGAATGGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTGAACTCAAACAGACATTTGAAGAATGGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TGTATAAAAGCTTTAACACTAACGTTGTT
TGTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAGTCGCCACCAGAGTTAAAAGTTTTAGCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGAGCTGAAATGTAGTTAAATGATTTTCCG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GCGTTTTAAGCTCTTGCATATAATCTTCTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GATAGATGCATCGCCAACCGCCCAAGTTAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GTGCATCGTTGATAAATTGCGTTTGTTGAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TATGGTTACCACACCTCTGATGATTGTGCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAGTCAGTAGCTCCTTTTTTGTTATTATTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAATTAATTTTCACAGTAAAAACCTACAGC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GCCGCTTTCTGAACTTCGACACGTACAGCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACCTCCGCCAATCAATGTGCCTAGTGGTTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACTCTAATAGCCAAAGTACGGTCATTTGAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACAATTCATGTTTTTAACCTGAAAATCAGC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGGTGAGGTTGATAATATTGAAACAATCAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAACGACCTTTGATTTCTGTCAATTGACCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGTGTATTTAGTCGGATCCGTGCTAGCAGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GTAAAAGATACCTTTTGAGTAACTGTTTCA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

>NC_017576|2|3|1484826-1486444|PILER-CR
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AATGTTTGCAAGAGGTTAACACCTGCTTGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTATTTTTTATGTCGCTGTCAATGTTAGCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGATGAAGATTTCCCTTTACCACCACTTAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACTCAATTTGAAGTTGAATGTTGCCAAGTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTGAACTCAAACAGACATTTGAAGAATGGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTGAACTCAAACAGACATTTGAAGAATGGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TTGAACTCAAACAGACATTTGAAGAATGGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TGTATAAAAGCTTTAACACTAACGTTGTT
TGTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAGTCGCCACCAGAGTTAAAAGTTTTAGCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGAGCTGAAATGTAGTTAAATGATTTTCCG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GCGTTTTAAGCTCTTGCATATAATCTTCTG
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GATAGATGCATCGCCAACCGCCCAAGTTAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GTGCATCGTTGATAAATTGCGTTTGTTGAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TATGGTTACCACACCTCTGATGATTGTGCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAGTCAGTAGCTCCTTTTTTGTTATTATTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AAATTAATTTTCACAGTAAAAACCTACAGC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GCCGCTTTCTGAACTTCGACACGTACAGCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACCTCCGCCAATCAATGTGCCTAGTGGTTT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACTCTAATAGCCAAAGTACGGTCATTTGAT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	ACAATTCATGTTTTTAACCTGAAAATCAGC
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGGTGAGGTTGATAATATTGAAACAATCAA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	TAACGACCTTTGATTTCTGTCAATTGACCT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	AGTGTATTTAGTCGGATCCGTGCTAGCAGT
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	GTAAAAGATACCTTTTGAGTAACTGTTTCA
GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_017576.1\|WP_012962172.1\|1487251_1487917_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NC_017576.1\|WP_009854541.1\|1493794_1493965_-\|hypothetical-protein	unknown	unknown	unknown
NC_017576.1\|WP_013643276.1\|1493966_1494662_-\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NC_017576.1\|WP_012962170.1\|1483936_1484353_-\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NC_017576.1\|WP_012962176.1\|1494636_1495410_-\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NC_017576.1\|WP_012962166.1\|1477983_1479033_-\|CRISPR-associated-protein-Cas7	csn2	cd12217_csn2_CAS-II-A	gnl\|CDD\|213410
NC_017576.1\|WP_012962171.1\|1486575_1486956_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|374224
NC_017576.1\|WP_012962162.1\|1472438_1473263_-\|prephenate-dehydratase	unknown	unknown	gnl\|CDD\|237013
NC_017576.1\|WP_012962161.1\|1470918_1472352_-\|LCP-family-protein	unknown	unknown	gnl\|CDD\|224235
NC_017576.1\|WP_012962177.1\|1495469_1496093_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|240029
NC_017576.1\|WP_012962163.1\|1473259_1473736_-\|shikimate-kinase	unknown	unknown	gnl\|CDD\|234654
NC_017576.1\|WP_012962169.1\|1480438_1483831_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|273840
NC_017576.1\|WP_014620182.1\|1475233_1477069_-\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NC_017576.1\|WP_012962164.1\|1473728_1475012_-\|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|235037
NC_017576.1\|WP_012962168.1\|1479354_1480266_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NC_017576.1\|WP_009854536.1\|1486967_1487156_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NC_017576.1\|WP_009854538.1\|1487903_1488248_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NC_017576.1\|WP_014620183.1\|1479029_1479353_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NC_017576.1\|WP_014620188.1\|1488244_1489111_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NC_017576.1\|WP_012962174.1\|1489110_1493226_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044

Protein	Function_ID	Function_description	E-value
NC_017576.1\|WP_012962172.1\|1487251_1487917_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	2.99246e-116
NC_017576.1\|WP_013643276.1\|1493966_1494662_-\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	2.10334e-66
NC_017576.1\|WP_012962170.1\|1483936_1484353_-\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	1.43302e-77
NC_017576.1\|WP_012962176.1\|1494636_1495410_-\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.09682e-129
NC_017576.1\|WP_012962166.1\|1477983_1479033_-\|CRISPR-associated-protein-Cas7	gnl\|CDD\|213410	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. This family of Csn2 proteins includes Stu0660, the proteins are larger than other (canonical) Csn2 proteins as they have an additional alpha-helical C-terminal domain. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.54678e-150
NC_017576.1\|WP_012962171.1\|1486575_1486956_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	2.52181e-16
NC_017576.1\|WP_012962162.1\|1472438_1473263_-\|prephenate-dehydratase	gnl\|CDD\|237013	PRK11898, PRK11898, prephenate dehydratase; Provisional.	1.39141e-151
NC_017576.1\|WP_012962161.1\|1470918_1472352_-\|LCP-family-protein	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	6.80408e-55
NC_017576.1\|WP_012962177.1\|1495469_1496093_-\|NUDIX-hydrolase	gnl\|CDD\|240029	cd04672, Nudix_Hydrolase_14, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	2.56275e-57
NC_017576.1\|WP_012962163.1\|1473259_1473736_-\|shikimate-kinase	gnl\|CDD\|234654	PRK00131, aroK, shikimate kinase; Reviewed.	4.94558e-59
NC_017576.1\|WP_012962169.1\|1480438_1483831_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|273840	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.	0
NC_017576.1\|WP_014620182.1\|1475233_1477069_-\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NC_017576.1\|WP_012962164.1\|1473728_1475012_-\|3-phosphoshikimate-1-carboxyvinyltransferase	gnl\|CDD\|235037	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	0
NC_017576.1\|WP_012962168.1\|1479354_1480266_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	7.18224e-124
NC_017576.1\|WP_009854536.1\|1486967_1487156_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	8.16808e-15
NC_017576.1\|WP_009854538.1\|1487903_1488248_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.71482e-48
NC_017576.1\|WP_014620183.1\|1479029_1479353_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.44988e-29
NC_017576.1\|WP_014620188.1\|1488244_1489111_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.36369e-129
NC_017576.1\|WP_012962174.1\|1489110_1493226_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0

>NC_017576.1|WP_012962170.1|1483936_1484353_-|nucleoside-diphosphate-kinase
MEKTFFMIKPDGVKRGLVGEVLHRIERRGFTIEKLEMRMATPELLEKHYVDLVDRPFFPLIVDFMTSGPVITGVMSGNEVITSWRTMMGATNPKEALPGTIRGDYAQAPDEGGATFNIVHGSDSSESVEREIALWFGE
>NC_017576.1|WP_012962169.1|1480438_1483831_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MTNGKILGLDIGIASVGVGIIEAKTGKVVHANSRLFSAANAENNAERRGFRGSRRLNRRKKHRVKRVRDLFEKYEIVTDFRNLNLNPYELRVKGLTEQLTNEELFAALRTISKRRGISYLDDAEDDSTGSTDYAKSIDENRRLLKTKTPGQIQLERLEKYGQLRGNFTVYDENGEAHRLINVFSTSDYEKEARKILETQADYNKKITAEFIDDYVEILTQKRKYYHGPGNEKSRTDYGRFRTDGTTLENIFGILIGKCSFYPDEYRASKASYTAQEYNFLNDLNNLKVPTETGKLSTEQKEALVEFAKSTATLGPAKLLKEIAKILDCKVDEIKGYREDDKGKPDLHTFEPYRKLKFNLDSVNIDDLSREVLDKLADILTLNTEREGIEDAIRHNLPNQFTEGQISEIIKVRKSQSTAFNKGWHSFSAKLMNELIPELYATSDEQMTILTRLEKFKVNKKSSKNTKTIDEKEVTDEIYNPVVAKSVRQTIKIINAAVKKYGDFDKIVIEMPRDKNADDEKKFIDKRNKENKKEKDDALKRAAYLYNGTDKLPDEVFHGNKQLETKIRLWYQQGERCLYSGKPIPIQELVHNSNNFEIDHILPLSLSFDDSLANKVLVYAWTNQEKGQKTPYQVIDSMDAAWSFREMKDYVLKQKGLGKKKRDYLLTTENIDKIEVKKKFIERNLVDTRYASRVVLNSLQSALRELGKDTKISVIRGQFTSQLRRKWKIDKSRETYHHHAVDALIIAASSQLKLWEKQDNPMFVDYGNNQVVDKQTGEILSVSDDEYKELVFQPPYQGFVNMISSKGFEDEILFSYQVDSKYNRKVSDATIYSTRKAKIGKDKKEETYVLGKIKDIYSQNGFDTFIKKYNKDKTQFLMYQKDPLTWENVIEVILRDYPTTKKSEDGKNDVKCNPFEEYRRENGLVCKYSKKGKGTPIKSLKYYDKKLGNCIDITPEGSKNEVVLQSLNPWRADVYFNPETLKYELLGLKYSDLSFEKGTGKYHISQEKYDVIKEKEGIGKKSEFKFTLYRNDLILIKDTASGEQEIYRFLSRTMPNVKHYAELKPYDKEKFDNVQELVEALGEADKVGRCIKGLNKSNLSIYKVRTDVLGNKYFVKKEGDKPKLDFKNNKK
>NC_017576.1|WP_012962168.1|1479354_1480266_-|type-II-CRISPR-associated-endonuclease-Cas1
MTWRVVHVNQSEKMRLKLDNIVIKKLGEEYTIPLSDISIIVAEGGDTVVTLRLLSALSKYNIALIVCDNQHLPTGIYHAPNGHSRAYKRLQKQLEWSQEQKDKLWQIVTYFKINNQQDVLSIFERDIDAIQLLADYKDNIELGDKTNREGHAAKVYFNELFGKQFTRVTQQEADVINAGLNYGYAIFRAQMARIIEGYGLNPLVGIFHRNEYNQFNLVDDLMEPFRQIVDVWVYQNLRDKEYLKYEYRLNLTNLLNAKIKYGNENCTVTGAMDKYVQGFIKCIDKKDTSKFFCPVVSSLELES
>NC_017576.1|WP_014620183.1|1479029_1479353_-|CRISPR-associated-endonuclease-Cas2
MRYAAMRLLCFFDLPMETAQEKRVYRNFRKELIANGFEMLQFSVYYRTCPNRSFANKFYKRLQQSNLPAGNVRLLAVTEKQFSEMTLIVGGETKQEEVVSDNKLVVI
>NC_017576.1|WP_012962166.1|1477983_1479033_-|CRISPR-associated-protein-Cas7
MRLHFTHPYKDNLDINFGQFTQIIGQNQQLKYYMWQIFMWYFDGKKYSEEDLSLFNQEEPEILCEGKSLKRNSFSVISISDIQDLLEQMSYKRGTVACDFLKLHLNTVDVMTEVDEINDKLDKISLTVNHNLDLSIKDVTYHTESCVVTSEQLLSKYFQPYFNYQGRNISFEFVDNETKVMFLLKMLQERLSNDTNNILLIFKNMDDYLDYSSFITICKTITQMTEKFPNFYCTIFPSNESYLYVTKETIEHVTIVSDFIESLFDLDFMYERFIGRYPSNNIPSKSEFLILLQKNASYLFSDQISYISLGISDMVAIKILNSLYQYDKSVVYPIPKIDPLEISFLKDRD
>NC_017576.1|WP_014620182.1|1475233_1477069_-|elongation-factor-4
MDIQELKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFSYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRQEIEDVIGLDASEAVLASAKAGIGIEEILEQIVEYVPAPAGDVEAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQLMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYIAASIKTVADTRVGDTVTLAENPAEAPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVNTTDGEMLEVSNPSEFPDPTKVASIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDENRVNVIYQIPLAEIVFDFFDKLKSSTHGYASFDYEISEYRKSKLVKMDILLNGDKVDALSFIVHNEFAYERGKLIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDNSKK
>NC_017576.1|WP_012962164.1|1473728_1475012_-|3-phosphoshikimate-1-carboxyvinyltransferase
MKLLTNVSQLKGTLRVPGDKSISHRSIMFGSLAKGTTTVHDILRGEDVLSTMQVFRDLGVDIQDDGNIVTITGVGFDGLKAPKNKLDMGNSGTSIRLISGVLAGQDFTVEMFGDDSLSKRPMDRVTIPLRQMGVEVSGQTDRDLPPLTMRGSKALKPIHYQLPVASAQVKSALIFAALQADGESVIIEKEKTRNHTEDMIVQFGGAIDVNGKEIRIKGGQEFTGQDVVVPGDISSAAFWLVAGLIVPNAKVTLENVGINETRTGIIDVIKEMGGKMTISNVDEIAKSATITVETSELHGVEIGGEIIPRLIDELPIIALLATQANGTTIIRDAEELKVKETDRIQVVADALNAMGADITPTDDGMIIKGKTPLHGAKVNTFGDHRIGMMTAIAALLVSDGDVELERAEAINTSYPSFFNDLEVLSRG
>NC_017576.1|WP_012962163.1|1473259_1473736_-|shikimate-kinase
MARIIIGFMGSGKSTISSLLDENYIDMDALITERIGMSIADFFAKEGEAKFREIESQVLAELADSDQVISTGGGVVINPINREILAKNPETIYLKSDFETLYDRIEHDTENIRPLFVNNSKEAFKEIFDGRQEMYEAAANRIIDVAGKTPEEIVEEIG
>NC_017576.1|WP_012962162.1|1472438_1473263_-|prephenate-dehydratase
MKVGYLGPSGSFTHNVAVKAFPEANRMPFANITEVIKSYEEGFVDYAIIPVENSIEGSVHETLDYLFHQAEIEAIAEIIQPIKQQLLATTQTKKIEKIFSHPQAIAQGKKYIKAHYPAAKIEMTASTAYAARFIAEHPEENFAAIAPVAAAKEYGLEIIAKDIQEMDENYTRFWVLGHQKRSFDLAKLNQKVSLALTLPDNLPGALYKALSVFAWRGIDLTKIESRPLKTALGEYFFIVDVENKNDTLVSFALEELSVLGIDYKILGRYDVYKL
>NC_017576.1|WP_012962161.1|1470918_1472352_-|LCP-family-protein
MARSNLSRHEELRYEYLLSNLEYLSAREKQEFDYLYNKKQASEISEPPRSQPSSAYNDNYYDDYYDDAYDNQVDYYDDDNWTSQGLPKYPEEKKQPKRSFRRTSEQQAEILPTYQDNYDEAFYQELEPVTPKKAKKSKKKRRKIRIKRLLKLLGFLVILVMVGMIYMFFKGVNDVSSGETNYTAAVTETFNGEDSDDGTNILILGSDQRITQGSSDARTDTIMVMNIGNSDEKIKLVSFMRDTLVNIDGVSYNAYSNDQKLNVAFNIGEQDDNQGAELMRQTLKDNFDINIKYYVMVDFETFAEAIDTLFPNGVEIDAKFGTVDGQAVSSVEVPDDLNMQADGTVPNQTIEVGTQKMDGRTLLNYARFRKDDDGDYGRTQRQQQVISAIVNQIKDPSKLFTGSAAIGKIYALTSTNVSYPFLLKEGLSVITSGQNGIEQTTIPAEGDWTDDYDMYGGLGIAIDFDKYQEELKELGLR
>NC_017576.1|WP_012962171.1|1486575_1486956_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MLKSYPAIFHKEGDGSFWVEFPGFGGGTEGDDVEEAMKNAREMLESSLAAYLDEGLELPKVVNMSELSVEDGFITLIQADPSPYLKSTKAIRKNVTVPEWLVRLADRENVNYSEVLTQALEKKLQL
>NC_017576.1|WP_009854536.1|1486967_1487156_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MPLTGRELAKLAVLKGWKEVRVKGSHHQFKKDGVPYILTIPIHGNKVLGVGLEKKILKDIGL
>NC_017576.1|WP_012962172.1|1487251_1487917_-|type-II-A-CRISPR-associated-protein-Csn2
MMKINFPILDEPIEILDATILTVEDVTVFSNLVRQFYSYSEECDLKLFDKKLRSLKVSELLLVTDIFGFDVNSQSMLKLIHADLESQLNDKPEVKSMIEQLANTITELLSYECLENELDLEYDEITILELIKALGVKIETQSDTIFEKCFEILQVYNYLSKKKLLIFVNSGAYLTKNEMEKLIEYIKLSNQKVLFLEPRRLYDFPQYVLDSDYFLIAENMN
>NC_017576.1|WP_009854538.1|1487903_1488248_-|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTETAEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNSANKAMIDRLQANNPKKGSITLLTVTEKQFARMIYLNGERNTSVANSDRRLVFLGEDYSDEN
>NC_017576.1|WP_014620188.1|1488244_1489111_-|type-II-CRISPR-associated-endonuclease-Cas1
MGWRTVIVNEHSKLSYKNNHLIFKDAYHTEMIHLEEIDILLLETTNIVLTTMLIERLVERNILIIFCDEKRLPTAMLTPYYGRHDSSLQLTNQIAWDDDVKCDVWTTIIAQKILNQSMYLGECSFFEKSQSIMELYHGLEPFDPSNREGHSARIYFNTLFGNDFSREQDNDINAGLDYGYTLLLSMFARELVVCGCMTQFGLKHANQFNQFNLASDIMEPFRPIVDRIVYENRNASFVKIKRELFTMFDETYSYNHKEMFLNNIVSDYTKKVVKALNHGGKGVPEFRI
>NC_017576.1|WP_012962174.1|1489110_1493226_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MTEKNYSIGLDIGTNSVGWAVITDDYKVPAKKMKVLGNTDKKYIKKNLLGALLFDNGETAEATRLKRTARRRYTRRKNRLRYLQEIFAEEMAKVDESFFYRLDESFLTTDDKDFERHPIFGNKADEIKYHQEFPTIYHLRKHLADSHEKADLRLIYLALAHMIKFRGHFLIEGELNAENTDVQKLFEAFVEVYDRTFDDSNLSEITVDASSILTEKFSKSRRLENLIKHYPTEKKNTLFGNLVALALGLQPNFKTSFKLSEDAKLQFSKDTYEEDLEELIGKIGDEYADLFTSAKNLYDAILLSGILTVADNTTKAPLSASMIKRYNEHQVDLKKLKEFIKNNASDKYDEIFNDKDKNGYAGYIENGVKQDEFYKYLKTTLSKIDGSDYFLDKIEREDFLRKQRTFDNGSIPHQIHLQEMHAILRRQGEHYAFLKENQAKIEKILTFRIPYYVGPLARKNSRFAWAEYHSDEKITPWNFDEIIDKEKSAEKFITRMTLNDLYLPEEKVLPKHSLVYETYTVYNELTKVKYVNEQGKSNFFDANMKQEIFEHVFKENRKVTKDKFLNYLNKEFPEYRIQDLIGLDKENKSFNASLGTYHDLKKILDKSFLDDKTNETIIEDIIQTLTLFEDRDMIRQRLQKYSDIFTPQQLKKLERRHYTGWGRLSYKLINGIRNKENGKSILDYLIDDGYANRNFMQLISDDTLPFKQIIKDAQIIGDIDDVTSVVRELPGSPAIKKGILQSVKIVDELVKVMGHNPDNIVIEMARENQTTNRGRNQSQQRLKKLQDSLKELGSNILNEEKPSYIEGKVENNHLQDDRLFLYYIQNGKDMYTGDELDIDHLSDYDIDHIIPQAFIKDDSIDNRVLTSSAKNRGKSDDVPSLDIVHDRKADWIRLYKSGLISKRKFDNLTKAERGGLTENDKAGFIKRQLVETRQITKHVAQILDSRFNTERDENDKVIRNVKVITLKSNLVSQFRKDFKFYKVREINDYHHAHDAYLNAVVGTALLKKYPKLAPEFVYGEYKKYDIRKFITSSGDKATAKYFFYSNLMNFFKRVIRYSNGKVVVRPVIECSKDTGEIAWNKQTDFEKVRRVLSYPQVNIVKKVETQTGGFSKESILPKGNSDKLIPRKTKKFRWDTPKYGGFDSPNIAYSVFVIADVEKGKAKKLKTVKELVGISIMERSSFEENPVVFLEKKGYQNVQEDNLIKLPKYSLFEFEGGRRRLLASASELQKGNEVVLSRHLVELLYHAHRVNSFNNSEHLKYVSEHKKEFGEVLSCVENFAKSYVDVEKNLGKIRAVADKIDTFSIEDISISFVNLLTLTALGAPADFNFLGEKIPRKRYTSTKECLNATLIHQSITGLYETRIDLSKLGEE
>NC_017576.1|WP_009854541.1|1493794_1493965_-|hypothetical-protein
MSLAWYYWLLFAVSWLFAILLWIKSTTIPQKWLKALFVICGLIAFALPFFWGWLVS
>NC_017576.1|WP_013643276.1|1493966_1494662_-|TIGR01906-family-membrane-protein
MNGILMKNKLWTFSTWLWLLALAVLVAIYGAWLIYPLEVDWLKLTLQVTITKDDLLKNFNILMTYLTNPLSHTLSMPDFPSSTDGLKHFRDVKHLFHLAQAVFVVMLYPSWRFWKNSRAEKSLFLHQRAFTLAAVLPVLIAVAGLLIGFDQFFTLFHEVLFPGDSTWLFNPATDPIIWVLPEEFFLHCFIIFFVTYEVIMIGLVVIARRQLAKRLQDQQKHPKTIKVERND
>NC_017576.1|WP_012962176.1|1494636_1495410_-|TIGR01457-family-HAD-type-hydrolase
MTYKGYLIDLDGTIYKGKNRIPAGERFIQRLQERNIPYVLVTNNTTRTPEKVQEMLATQFNVHTPLETIYTATMATIDYMNDMNRGKTVYVIGETGLKTAIAEAGYVEDTENPAYVVVGLDTQLTYEMLAVATLAIQKGAVFIGTNPDLNIPTERGLMPGAGSINKLLETATRVQPVFIGKPNAIIMNKALDVLGVKREEAIMVGDNYLTDIMAGIQNDIATLLVTTGFTKPEEVPTLPVKPDHVLASLDEWNFDEK
>NC_017576.1|WP_012962177.1|1495469_1496093_-|NUDIX-hydrolase
MTVDDKKWVDWLVRLQSLAQAGLAYGRDKYDIERFKEIREISVAMMAELSQLPAQKVADLFANETGYQTPKIDTRAAIFQDDKILLVQEANGKWALPGGWCDVDQSVAENTLKEAKEEAGLDVELERVIAIQDREKHNQPVSAHKICKIFSLCHAKGGHFTKNLETIASGYFACDNLPELAKSKTTKEQIAMCFTAYYDENWKTLID

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP046625	Streptococcus sp. CNU G3 plasmid p1_CUN_G3, complete sequence	26276-26304	0	1.0
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP046625	Streptococcus sp. CNU G3 plasmid p1_CUN_G3, complete sequence	26276-26305	0	1.0
NC_017576_2	2.16\|1485521\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485521-1485550	30	MK448709	Streptococcus phage Javan231, complete genome	20980-21009	0	1.0
NC_017576_2	2.16\|1485521\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485521-1485550	30	MK448710	Streptococcus phage Javan233, complete genome	20980-21009	0	1.0
NC_017576_2	2.16\|1485521\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485521-1485550	30	MK448707	Streptococcus phage Javan227, complete genome	23177-23206	0	1.0
NC_017576_2	2.18\|1485653\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485653-1485682	30	MK448879	Streptococcus phage Javan226, complete genome	7540-7569	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MH937495	Streptococcus phage CHPC1045, complete genome	1646-1675	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MF580775	Streptococcus phage V2, complete genome	1830-1859	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MH937496	Streptococcus phage CHPC1046, complete genome	1633-1662	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MF580762	Streptococcus phage 9B4, complete genome	1830-1859	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MH937458	Streptococcus phage CHPC572, complete genome	1681-1710	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MH937493	Streptococcus phage CHPC1041, complete genome	1724-1753	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MF580760	Streptococcus phage 7T, complete genome	1594-1623	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MH892379	Streptococcus phage SWK3, complete genome	2300-2329	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MH892359	Streptococcus phage SW10, complete genome	2538-2567	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	KY705263	Streptococcus phage P7133, complete genome	1852-1881	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MH892356	Streptococcus phage SW21, complete genome	2326-2355	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MF580763	Streptococcus phage 16B8, complete genome	1611-1640	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MH892358	Streptococcus phage SW9, complete genome	2327-2356	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MF580772	Streptococcus phage R1, complete genome	1830-1859	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MF580764	Streptococcus phage 31B4, complete genome	1830-1859	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MH937497	Streptococcus phage CHPC1048, complete genome	1656-1685	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MF580759	Streptococcus phage 7A5, complete genome	1830-1859	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MH892352	Streptococcus phage SW1, complete genome	2229-2258	0	1.0
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MH892380	Streptococcus phage SWK4, complete genome	2300-2329	0	1.0
NC_017576_1	1.10\|1477855\|28\|NC_017576\|CRISPRCasFinder,PILER-CR	1477855-1477882	28	MK448878	Streptococcus phage Javan224, complete genome	31966-31993	1	0.964
NC_017576_1	1.20\|1477855\|29\|NC_017576\|CRT	1477855-1477883	29	MK448878	Streptococcus phage Javan224, complete genome	31966-31994	1	0.966
NC_017576_2	2.10\|1485126\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485126-1485155	30	MK448890	Streptococcus phage Javan264, complete genome	4467-4496	1	0.967
NC_017576_2	2.11\|1485192\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485192-1485221	30	MK448890	Streptococcus phage Javan264, complete genome	4467-4496	1	0.967
NC_017576_2	2.12\|1485258\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485258-1485287	30	MK448890	Streptococcus phage Javan264, complete genome	4467-4496	1	0.967
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MG708274	Streptococcus phage vB_SthS_VA214, complete genome	35367-35396	1	0.967
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	KY705256	Streptococcus phage P3681, complete genome	3244-3273	1	0.967
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MH937461	Streptococcus phage CHPC642, complete genome	1716-1745	1	0.967
NC_017576_2	2.18\|1485653\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485653-1485682	30	MK448874	Streptococcus phage Javan206, complete genome	6195-6224	2	0.933
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	KY705288	Streptococcus phage P9901, complete genome	1614-1643	2	0.933
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MH892381	Streptococcus phage SWK5, complete genome	2535-2564	2	0.933
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MH892382	Streptococcus phage SWK6, complete genome	2409-2438	2	0.933
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP015352	Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence	128483-128511	4	0.862
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MF417900	Uncultured Caudovirales phage clone 8AX_1, partial genome	4172-4201	4	0.867
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MF417899	Uncultured Caudovirales phage clone 7S_8, partial genome	37772-37801	4	0.867
NC_017576_2	2.17\|1485587\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485587-1485616	30	MK448878	Streptococcus phage Javan224, complete genome	24506-24535	4	0.867
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP015352	Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence	128482-128511	5	0.833
NC_017576_1	1.18\|1477723\|30\|NC_017576\|CRT	1477723-1477752	30	NZ_CP046714	Nostoc sp. ATCC 53789 plasmid pNsp_k, complete sequence	11321-11350	5	0.833
NC_017576_1	1.20\|1477855\|29\|NC_017576\|CRT	1477855-1477883	29	NZ_CP031226	Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence	50641-50669	5	0.828
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	MG969413	UNVERIFIED: Salmonella phage GE_vB_N8, complete genome	15902-15931	5	0.833
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	MK415403	CrAssphage ES_ALL_000190F, complete genome	27953-27982	5	0.833
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	MK415410	CrAssphage YS1-2_2437, complete genome	29527-29556	5	0.833
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	MT774386	CrAssphage cr110_1, complete genome	76229-76258	5	0.833
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	MT774383	CrAssphage cr11_1, complete genome	92099-92128	5	0.833
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MH542234	Staphylococcus phage Terranova, complete genome	137438-137467	5	0.833
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MK448675	Streptococcus phage Javan129, complete genome	15498-15527	5	0.833
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MK449012	Streptococcus phage Javan94, complete genome	10209-10238	5	0.833
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MK448676	Streptococcus phage Javan131, complete genome	17867-17896	5	0.833
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MK448673	Streptococcus phage Javan119, complete genome	12114-12143	5	0.833
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MK448750	Streptococcus phage Javan393, complete genome	13902-13931	5	0.833
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	NZ_CP014917	Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-2, complete sequence	23799-23828	5	0.833
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	NZ_CP016798	Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-1, complete sequence	29010-29039	5	0.833
NC_017576_2	2.7\|1484928\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1484928-1484957	30	MK249191	Blackfly microvirus SF02 isolate 125, complete genome	3435-3464	5	0.833
NC_017576_2	2.16\|1485521\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485521-1485550	30	MN694164	Marine virus AFVG_250M1189, complete genome	24121-24150	5	0.833
NC_017576_2	2.27\|1486247\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486247-1486276	30	NZ_CP048281	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence	653402-653431	5	0.833
NC_017576_2	2.27\|1486247\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486247-1486276	30	NZ_CP022565	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence	764242-764271	5	0.833
NC_017576_1	1.3\|1477393\|29\|NC_017576\|CRISPRCasFinder	1477393-1477421	29	NZ_CP016859	Staphylococcus aureus subsp. aureus strain 1971.C01 plasmid p1971.C01b, complete sequence	4660-4688	6	0.793
NC_017576_1	1.3\|1477393\|29\|NC_017576\|CRISPRCasFinder	1477393-1477421	29	CP013960	Staphylococcus aureus strain V605 plasmid pV605, complete sequence	14756-14784	6	0.793
NC_017576_1	1.3\|1477393\|29\|NC_017576\|CRISPRCasFinder	1477393-1477421	29	NZ_LT571450	Staphylococcus epidermidis isolate BPH0662 plasmid 2	24643-24671	6	0.793
NC_017576_1	1.3\|1477393\|29\|NC_017576\|CRISPRCasFinder	1477393-1477421	29	NC_013374	Staphylococcus epidermidis plasmid SAP045A, complete sequence	13483-13511	6	0.793
NC_017576_1	1.3\|1477393\|29\|NC_017576\|CRISPRCasFinder	1477393-1477421	29	NZ_KY465818	Staphylococcus aureus subsp. aureus strain CC1 plasmid p140355, complete sequence	14572-14600	6	0.793
NC_017576_1	1.3\|1477393\|29\|NC_017576\|CRISPRCasFinder	1477393-1477421	29	NZ_KU882686	Staphylococcus lugdunensis strain Tlug63N-4 plasmid pT63N, complete sequence	14780-14808	6	0.793
NC_017576_1	1.3\|1477393\|29\|NC_017576\|CRISPRCasFinder	1477393-1477421	29	NZ_CP033813	Staphylococcus haemolyticus strain FDAARGOS_517 plasmid unnamed2	10830-10858	6	0.793
NC_017576_1	1.3\|1477393\|29\|NC_017576\|CRISPRCasFinder	1477393-1477421	29	NZ_LR027871	Staphylococcus aureus strain BPH2019 isolate BPH2019 plasmid 2	12234-12262	6	0.793
NC_017576_1	1.3\|1477393\|29\|NC_017576\|CRISPRCasFinder	1477393-1477421	29	NC_010279	Staphylococcus aureus plasmid pV030-8, complete sequence	24442-24470	6	0.793
NC_017576_1	1.3\|1477393\|29\|NC_017576\|CRISPRCasFinder	1477393-1477421	29	NZ_CP014118	Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed1, complete sequence	149-177	6	0.793
NC_017576_1	1.3\|1477393\|29\|NC_017576\|CRISPRCasFinder	1477393-1477421	29	NZ_CP031887	Staphylococcus aureus strain CFSAN082783 plasmid pMRSA_24, complete sequence	22065-22093	6	0.793
NC_017576_1	1.3\|1477393\|29\|NC_017576\|CRISPRCasFinder	1477393-1477421	29	NZ_CP029661	Staphylococcus aureus strain AR_0228 plasmid unnamed1, complete sequence	3202-3230	6	0.793
NC_017576_1	1.4\|1477459\|29\|NC_017576\|CRISPRCasFinder	1477459-1477487	29	MN131137	Aeromonas phage D6, complete genome	165962-165990	6	0.793
NC_017576_1	1.4\|1477459\|29\|NC_017576\|CRISPRCasFinder	1477459-1477487	29	MK838116	Aeromonas phage LAh10, complete genome	112242-112270	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP041625	Escherichia coli O157:H7 strain ATCC 43888 plasmid p35K_like, complete sequence	13620-13648	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP028594	Escherichia coli strain 150 plasmid pTA150-2, complete sequence	23150-23178	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP020924	Salmonella enterica subsp. enterica strain 16A242 plasmid unnamed2, complete sequence	27003-27031	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP028605	Escherichia coli strain 144 plasmid pTA144-2, complete sequence	25598-25626	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP038307	Escherichia coli O157:H7 strain SS NE 1040-1 plasmid pNE1040-3, complete sequence	21441-21469	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP038311	Escherichia coli O157:H7 strain Show KS 470-1 plasmid pKS470-3, complete sequence	23169-23197	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP038303	Escherichia coli O157:H7 strain SS TX 313-1 plasmid pTX313-2, complete sequence	24806-24834	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP038337	Escherichia coli O157:H7 strain LSU61 plasmid pLSU61-2, complete sequence	22299-22327	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_AP018807	Escherichia coli strain E2863 plasmid pE2863-5, complete sequence	27013-27041	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP025752	Escherichia coli strain CV839-06 plasmid pCV839-06-p2, complete sequence	47350-47378	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP015284	Streptococcus salivarius strain ATCC 25975 plasmid, complete sequence	29222-29250	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP022051	Escherichia coli O157 strain FDAARGOS_293 plasmid unnamed1, complete sequence	5467-5495	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP038317	Escherichia coli O157:H7 strain NE92 plasmid pNE92-2, complete sequence	26119-26147	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_MG904994	Escherichia coli strain 14OD0056 plasmid p14ODV, complete sequence	22390-22418	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP042629	Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-2, complete sequence	25660-25688	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP038409	Escherichia coli O157:H7 strain 86-24 plasmid p86-24-2, complete sequence	3087-3115	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	781-809	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP038367	Escherichia coli O157:H7 strain F6667 plasmid pF6667-2, complete sequence	27222-27250	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP007599	Salmonella enterica subsp. enterica serovar Enteritidis str. 77-1427 plasmid pCFSAN000111_01, complete sequence	39174-39202	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	30236-30264	6	0.793
NC_017576_1	1.7\|1477657\|29\|NC_017576\|CRISPRCasFinder,PILER-CR	1477657-1477685	29	NZ_CP015845	Escherichia coli O157:H7 strain FRIK2455 plasmid p35K, complete sequence	6787-6815	6	0.793
NC_017576_1	1.10\|1477855\|28\|NC_017576\|CRISPRCasFinder,PILER-CR	1477855-1477882	28	NZ_CP031226	Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence	50641-50668	6	0.786
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	CP033536	Acinetobacter pittii strain 2012N21-164 plasmid p2012N21-164-1, complete sequence	32768-32797	6	0.8
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	CP033532	Acinetobacter pittii strain 2014S07-126 plasmid p2014S07-126-2, complete sequence	56236-56265	6	0.8
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	NZ_CP026087	Acinetobacter pittii strain WCHAP005069 plasmid p1_005069, complete sequence	48286-48315	6	0.8
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	NC_025173	Acinetobacter pittii strain MS32 plasmid pMS32-1, complete sequence	53543-53572	6	0.8
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	NC_010404	Acinetobacter baumannii AYE plasmid p3ABAYE, complete sequence	53528-53557	6	0.8
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	NZ_CP010369	Acinetobacter nosocomialis strain 6411 plasmid p6411-89.111kb, complete sequence	87433-87462	6	0.8
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	NZ_CP027251	Acinetobacter pittii strain WCHAP100020 plasmid p1_100020, complete sequence	16153-16182	6	0.8
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	NZ_CP043054	Acinetobacter pittii strain AP43 plasmid pAP43-2, complete sequence	2865-2894	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	KX532239	Staphylococcus phage StAP1, complete genome	128399-128428	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	LC492751	Staphylococcus phage KSAP7 genomic DNA, compelete genome	114967-114996	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	LC492752	Staphylococcus phage KSAP11 genomic DNA, compelete genome	115324-115353	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	AP019522	Staphylococcal phage MR003 DNA, complete genome	12742-12771	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	NC_007021	Staphylococcus phage Twort, complete genome	106286-106315	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	NC_022090	Staphylococcus phage vB_SauM_Remus, complete genome	111567-111596	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	KP881332	Staphylococcus phage Stau2, complete genome	114976-115005	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MT080595	UNVERIFIED: Staphylococcus phage vB_SauM_EW41, partial genome	102945-102974	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MT151386	Staphylococcus virus Twort, complete genome	18109-18138	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	NC_020877	Staphylococcus phage vB_SauM_Romulus, complete genome	108256-108285	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MK449000	Streptococcus phage Javan64, complete genome	6448-6477	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	AP019561	Staphylococcus phage SP197 DNA, complete genome	5439-5468	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	NC_007051	Staphylococcus phage 2638A, complete genome	32452-32481	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	JX194239	Staphylococcus phage SA11, complete genome	10967-10996	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MK450538	Staphylococcus phage vB_SpsS_QT1, complete genome	34364-34393	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MK075005	Staphylococcus phage phiSP119-2, partial genome	12996-13025	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MK075002	Staphylococcus phage phiSP38-1, complete genome	14950-14979	6	0.8
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	AY954954	Bacteriophage 2638A, complete genome	32452-32481	6	0.8
NC_017576_2	2.7\|1484928\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1484928-1484957	30	NZ_CP035950	'Catharanthus roseus' aster yellows phytoplasma strain De Villa plasmid unnamed1, complete sequence	494-523	6	0.8
NC_017576_2	2.22\|1485917\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485917-1485946	30	MG945913	UNVERIFIED: Microviridae sp. isolate 8824-1602, partial genome	1627-1656	6	0.8
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	NZ_CP009650	Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence	131479-131508	6	0.8
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	NZ_CP028104	Fusobacterium varium ATCC 27725 plasmid pFvar_27725, complete sequence	25524-25553	6	0.8
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	NZ_CP007625	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	96289-96318	6	0.8
NC_017576_1	1.1\|1477261\|29\|NC_017576\|CRISPRCasFinder	1477261-1477289	29	NZ_CP025540	Vibrio harveyi strain 345 plasmid p345-67, complete sequence	65725-65753	7	0.759
NC_017576_1	1.4\|1477459\|29\|NC_017576\|CRISPRCasFinder	1477459-1477487	29	NC_031070	Bacillus phage Nemo, complete genome	69249-69277	7	0.759
NC_017576_1	1.4\|1477459\|29\|NC_017576\|CRISPRCasFinder	1477459-1477487	29	MF288919	Bacillus phage AaronPhadgers, complete genome	68959-68987	7	0.759
NC_017576_1	1.4\|1477459\|29\|NC_017576\|CRISPRCasFinder	1477459-1477487	29	NC_031024	Bacillus phage Belinda, complete genome	69497-69525	7	0.759
NC_017576_1	1.4\|1477459\|29\|NC_017576\|CRISPRCasFinder	1477459-1477487	29	MH638311	Bacillus phage OmnioDeoPrimus, complete genome	69183-69211	7	0.759
NC_017576_1	1.4\|1477459\|29\|NC_017576\|CRISPRCasFinder	1477459-1477487	29	MF288918	Bacillus phage Bubs, complete genome	69278-69306	7	0.759
NC_017576_1	1.5\|1477525\|29\|NC_017576\|CRISPRCasFinder	1477525-1477553	29	MN856003	Bacteriophage sp. isolate 1, complete genome	39145-39173	7	0.759
NC_017576_1	1.6\|1477591\|29\|NC_017576\|CRISPRCasFinder	1477591-1477619	29	MN078104	Bacteroides phage Barc2635, complete genome	26665-26693	7	0.759
NC_017576_1	1.6\|1477591\|29\|NC_017576\|CRISPRCasFinder	1477591-1477619	29	FJ008913	Bacteroides phage B40-8 culture-collection ATCC:51477-B1, complete genome	31064-31092	7	0.759
NC_017576_1	1.6\|1477591\|29\|NC_017576\|CRISPRCasFinder	1477591-1477619	29	NC_011222	Bacteroides phage B40-8, complete genome	31064-31092	7	0.759
NC_017576_1	1.6\|1477591\|29\|NC_017576\|CRISPRCasFinder	1477591-1477619	29	NC_016770	Bacteroides phage B124-14, complete genome	39445-39473	7	0.759
NC_017576_1	1.6\|1477591\|29\|NC_017576\|CRISPRCasFinder	1477591-1477619	29	HE608841	Bacteroides phage B124-14 complete genome	39445-39473	7	0.759
NC_017576_1	1.6\|1477591\|29\|NC_017576\|CRISPRCasFinder	1477591-1477619	29	MT630433	Bacteroides phage vB_BfrS_23, complete genome	41719-41747	7	0.759
NC_017576_1	1.11\|1477261\|30\|NC_017576\|CRT	1477261-1477290	30	NZ_CP025540	Vibrio harveyi strain 345 plasmid p345-67, complete sequence	65725-65754	7	0.767
NC_017576_1	1.13\|1477393\|30\|NC_017576\|CRT,PILER-CR	1477393-1477422	30	NZ_KY465818	Staphylococcus aureus subsp. aureus strain CC1 plasmid p140355, complete sequence	14572-14601	7	0.767
NC_017576_1	1.13\|1477393\|30\|NC_017576\|CRT,PILER-CR	1477393-1477422	30	NZ_KU882686	Staphylococcus lugdunensis strain Tlug63N-4 plasmid pT63N, complete sequence	14780-14809	7	0.767
NC_017576_1	1.13\|1477393\|30\|NC_017576\|CRT,PILER-CR	1477393-1477422	30	NZ_CP033813	Staphylococcus haemolyticus strain FDAARGOS_517 plasmid unnamed2	10830-10859	7	0.767
NC_017576_1	1.13\|1477393\|30\|NC_017576\|CRT,PILER-CR	1477393-1477422	30	NZ_LR027871	Staphylococcus aureus strain BPH2019 isolate BPH2019 plasmid 2	12234-12263	7	0.767
NC_017576_1	1.13\|1477393\|30\|NC_017576\|CRT,PILER-CR	1477393-1477422	30	NC_010279	Staphylococcus aureus plasmid pV030-8, complete sequence	24442-24471	7	0.767
NC_017576_1	1.13\|1477393\|30\|NC_017576\|CRT,PILER-CR	1477393-1477422	30	NZ_CP014118	Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed1, complete sequence	149-178	7	0.767
NC_017576_1	1.13\|1477393\|30\|NC_017576\|CRT,PILER-CR	1477393-1477422	30	NZ_CP031887	Staphylococcus aureus strain CFSAN082783 plasmid pMRSA_24, complete sequence	22065-22094	7	0.767
NC_017576_1	1.13\|1477393\|30\|NC_017576\|CRT,PILER-CR	1477393-1477422	30	NZ_CP029661	Staphylococcus aureus strain AR_0228 plasmid unnamed1, complete sequence	3202-3231	7	0.767
NC_017576_1	1.13\|1477393\|30\|NC_017576\|CRT,PILER-CR	1477393-1477422	30	NZ_CP016859	Staphylococcus aureus subsp. aureus strain 1971.C01 plasmid p1971.C01b, complete sequence	4659-4688	7	0.767
NC_017576_1	1.13\|1477393\|30\|NC_017576\|CRT,PILER-CR	1477393-1477422	30	CP013960	Staphylococcus aureus strain V605 plasmid pV605, complete sequence	14755-14784	7	0.767
NC_017576_1	1.13\|1477393\|30\|NC_017576\|CRT,PILER-CR	1477393-1477422	30	NZ_LT571450	Staphylococcus epidermidis isolate BPH0662 plasmid 2	24642-24671	7	0.767
NC_017576_1	1.13\|1477393\|30\|NC_017576\|CRT,PILER-CR	1477393-1477422	30	NC_013374	Staphylococcus epidermidis plasmid SAP045A, complete sequence	13482-13511	7	0.767
NC_017576_1	1.14\|1477459\|30\|NC_017576\|CRT,PILER-CR	1477459-1477488	30	MN131137	Aeromonas phage D6, complete genome	165961-165990	7	0.767
NC_017576_1	1.14\|1477459\|30\|NC_017576\|CRT,PILER-CR	1477459-1477488	30	MK838116	Aeromonas phage LAh10, complete genome	112241-112270	7	0.767
NC_017576_1	1.15\|1477525\|30\|NC_017576\|CRT	1477525-1477554	30	MN856003	Bacteriophage sp. isolate 1, complete genome	39144-39173	7	0.767
NC_017576_1	1.16\|1477591\|30\|NC_017576\|CRT	1477591-1477620	30	NC_016770	Bacteroides phage B124-14, complete genome	39444-39473	7	0.767
NC_017576_1	1.16\|1477591\|30\|NC_017576\|CRT	1477591-1477620	30	HE608841	Bacteroides phage B124-14 complete genome	39444-39473	7	0.767
NC_017576_1	1.16\|1477591\|30\|NC_017576\|CRT	1477591-1477620	30	MT630433	Bacteroides phage vB_BfrS_23, complete genome	41718-41747	7	0.767
NC_017576_1	1.16\|1477591\|30\|NC_017576\|CRT	1477591-1477620	30	MN078104	Bacteroides phage Barc2635, complete genome	26665-26694	7	0.767
NC_017576_1	1.16\|1477591\|30\|NC_017576\|CRT	1477591-1477620	30	FJ008913	Bacteroides phage B40-8 culture-collection ATCC:51477-B1, complete genome	31064-31093	7	0.767
NC_017576_1	1.16\|1477591\|30\|NC_017576\|CRT	1477591-1477620	30	NC_011222	Bacteroides phage B40-8, complete genome	31064-31093	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP046399	Bacillus sp. A260 plasmid unnamed11, complete sequence	63290-63319	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP041625	Escherichia coli O157:H7 strain ATCC 43888 plasmid p35K_like, complete sequence	13620-13649	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP028594	Escherichia coli strain 150 plasmid pTA150-2, complete sequence	23150-23179	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP020924	Salmonella enterica subsp. enterica strain 16A242 plasmid unnamed2, complete sequence	27003-27032	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP028605	Escherichia coli strain 144 plasmid pTA144-2, complete sequence	25598-25627	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP038307	Escherichia coli O157:H7 strain SS NE 1040-1 plasmid pNE1040-3, complete sequence	21441-21470	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP038311	Escherichia coli O157:H7 strain Show KS 470-1 plasmid pKS470-3, complete sequence	23169-23198	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP038303	Escherichia coli O157:H7 strain SS TX 313-1 plasmid pTX313-2, complete sequence	24806-24835	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP038337	Escherichia coli O157:H7 strain LSU61 plasmid pLSU61-2, complete sequence	22299-22328	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_AP018807	Escherichia coli strain E2863 plasmid pE2863-5, complete sequence	27013-27042	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP025752	Escherichia coli strain CV839-06 plasmid pCV839-06-p2, complete sequence	47350-47379	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP015284	Streptococcus salivarius strain ATCC 25975 plasmid, complete sequence	29222-29251	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP022051	Escherichia coli O157 strain FDAARGOS_293 plasmid unnamed1, complete sequence	5467-5496	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP038317	Escherichia coli O157:H7 strain NE92 plasmid pNE92-2, complete sequence	26119-26148	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_MG904994	Escherichia coli strain 14OD0056 plasmid p14ODV, complete sequence	22390-22419	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP042629	Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-2, complete sequence	25659-25688	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP038409	Escherichia coli O157:H7 strain 86-24 plasmid p86-24-2, complete sequence	3086-3115	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	780-809	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP038367	Escherichia coli O157:H7 strain F6667 plasmid pF6667-2, complete sequence	27221-27250	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP007599	Salmonella enterica subsp. enterica serovar Enteritidis str. 77-1427 plasmid pCFSAN000111_01, complete sequence	39173-39202	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	30235-30264	7	0.767
NC_017576_1	1.17\|1477657\|30\|NC_017576\|CRT	1477657-1477686	30	NZ_CP015845	Escherichia coli O157:H7 strain FRIK2455 plasmid p35K, complete sequence	6786-6815	7	0.767
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	MK448939	Streptococcus phage Javan440, complete genome	419-448	7	0.767
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	MK448758	Streptococcus phage Javan433, complete genome	419-448	7	0.767
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	MK448759	Streptococcus phage Javan439, complete genome	419-448	7	0.767
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	MK448757	Streptococcus phage Javan427, complete genome	419-448	7	0.767
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	MK448912	Streptococcus phage Javan340, complete genome	419-448	7	0.767
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	KY065449	Streptococcus phage IPP5, complete genome	419-448	7	0.767
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	MH552532	Siphoviridae sp. isolate ctbf3, complete genome	44148-44177	7	0.767
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	NZ_CP014913	Lactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-1, complete sequence	44023-44052	7	0.767
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	116278-116307	7	0.767
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	NZ_CP014925	Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-1, complete sequence	1106-1135	7	0.767
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	KY065496	Streptococcus phage IPP60, complete genome	14945-14974	7	0.767
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MK448754	Streptococcus phage Javan411, complete genome	13395-13424	7	0.767
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MK448929	Streptococcus phage Javan400, complete genome	13395-13424	7	0.767
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MK448854	Streptococcus phage Javan146, complete genome	13590-13619	7	0.767
NC_017576_2	2.7\|1484928\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1484928-1484957	30	NZ_CP049117	Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed2, complete sequence	37629-37658	7	0.767
NC_017576_2	2.7\|1484928\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1484928-1484957	30	NZ_CP035035	Pantoea ananatis strain NN08200 plasmid unnamed1, complete sequence	3600-3629	7	0.767
NC_017576_2	2.13\|1485324\|29\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485324-1485352	29	NZ_CP014792	Borrelia hermsii HS1 isolate Browne Mountain plasmid lpB58, complete sequence	52063-52091	7	0.759
NC_017576_2	2.20\|1485785\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485785-1485814	30	NC_009897	Rickettsia massiliae MTU5 plasmid pRMA, complete sequence	2537-2566	7	0.767
NC_017576_2	2.20\|1485785\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485785-1485814	30	NZ_CP013135	Rickettsia rhipicephali strain HJ#5 plasmid pHJ52 sequence	1632-1661	7	0.767
NC_017576_2	2.20\|1485785\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485785-1485814	30	NC_017055	Rickettsia rhipicephali str. 3-7-female6-CWPP plasmid pMCC_1, complete sequence	1815-1844	7	0.767
NC_017576_2	2.20\|1485785\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485785-1485814	30	MN694211	Marine virus AFVG_250M746, complete genome	24410-24439	7	0.767
NC_017576_2	2.20\|1485785\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485785-1485814	30	NC_015418	Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence	64411-64440	7	0.767
NC_017576_2	2.21\|1485851\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485851-1485880	30	LC487410	Vibrio phage KIT04 DNA, complete genome	5555-5584	7	0.767
NC_017576_2	2.23\|1485983\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485983-1486012	30	NC_009926	Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence	275177-275206	7	0.767
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	MN855855	Bacteriophage sp. isolate 263, complete genome	7303-7332	7	0.767
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	HM596271	Leuconostoc phage phiMH1, partial genome	16227-16256	7	0.767
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	CP053577	Salmonella enterica strain 2012K-0845 plasmid unnamed2, complete sequence	209343-209372	7	0.767
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	NZ_CP022492	Salmonella enterica subsp. enterica serovar Saintpaul strain SA20031783 plasmid unnamed1, complete sequence	99169-99198	7	0.767
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	NZ_CP019182	Salmonella enterica subsp. enterica serovar Inverness str. ATCC 10720 plasmid pATCC10720, complete sequence	82568-82597	7	0.767
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	NZ_CP019193	Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 plasmid pATCC10717, complete sequence	168771-168800	7	0.767
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	CP053403	Salmonella enterica strain 2010K-2057 plasmid unnamed1, complete sequence	69320-69349	7	0.767
NC_017576_2	2.25\|1486115\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486115-1486144	30	NZ_CP024166	Salmonella enterica subsp. enterica serovar Gaminara strain CFSAN070644 plasmid pCFSAN024441_01, complete sequence	41305-41334	7	0.767
NC_017576_2	2.28\|1486313\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486313-1486342	30	DQ079872	Coliphage NC35, complete genome	4672-4701	7	0.767
NC_017576_2	2.29\|1486379\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486379-1486408	30	AY682195	Lactobacillus plantarum bacteriophage LP65, complete genome	61291-61320	7	0.767
NC_017576_2	2.29\|1486379\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486379-1486408	30	NC_006565	Lactobacillus phage LP65, complete genome	61291-61320	7	0.767
NC_017576_1	1.4\|1477459\|29\|NC_017576\|CRISPRCasFinder	1477459-1477487	29	NC_021529	Vibrio phage nt-1, complete genome	74206-74234	8	0.724
NC_017576_1	1.6\|1477591\|29\|NC_017576\|CRISPRCasFinder	1477591-1477619	29	NZ_CP019641	Planococcus sp. Y42 plasmid unnamed1, complete sequence	127830-127858	8	0.724
NC_017576_1	1.14\|1477459\|30\|NC_017576\|CRT,PILER-CR	1477459-1477488	30	NC_031070	Bacillus phage Nemo, complete genome	69249-69278	8	0.733
NC_017576_1	1.14\|1477459\|30\|NC_017576\|CRT,PILER-CR	1477459-1477488	30	MF288919	Bacillus phage AaronPhadgers, complete genome	68959-68988	8	0.733
NC_017576_1	1.14\|1477459\|30\|NC_017576\|CRT,PILER-CR	1477459-1477488	30	NC_031024	Bacillus phage Belinda, complete genome	69497-69526	8	0.733
NC_017576_1	1.14\|1477459\|30\|NC_017576\|CRT,PILER-CR	1477459-1477488	30	MH638311	Bacillus phage OmnioDeoPrimus, complete genome	69183-69212	8	0.733
NC_017576_1	1.14\|1477459\|30\|NC_017576\|CRT,PILER-CR	1477459-1477488	30	MF288918	Bacillus phage Bubs, complete genome	69278-69307	8	0.733
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	NZ_CP007649	Lactobacillus salivarius strain JCM1046 plasmid pLMP1046, complete sequence	47711-47740	8	0.733
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	NZ_CP015323	Bacillus filamentosus strain Hbe603 plasmid pBEH1, complete sequence	32121-32150	8	0.733
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	MT074456	Salmonella phage polluks, complete genome	8188-8217	8	0.733
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	NZ_CP037437	Lactobacillus plantarum strain EM plasmid pEM8, complete sequence	21048-21077	8	0.733
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	LR217706	Candidatus Erwinia sp. (ex Cinara spp.) strain ErCisplendens/pseudotsugae genome assembly, plasmid: pBioThi	1372-1401	8	0.733
NC_017576_2	2.3\|1484664\|30\|NC_017576\|CRISPRCasFinder,CRT	1484664-1484693	30	MN940411	Staphylococcus phage f2b1, partial genome	4937-4966	8	0.733
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MK448739	Streptococcus phage Javan363, complete genome	6339-6368	8	0.733
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MK448901	Streptococcus phage Javan306, complete genome	11239-11268	8	0.733
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	GQ478085	Enterococcus phage phiFL2B, complete genome	11878-11907	8	0.733
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MF417967	Uncultured Caudovirales phage clone 3S_16, partial genome	10058-10087	8	0.733
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	MK448830	Streptococcus phage Javan73, complete genome	13883-13912	8	0.733
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	KY065463	Streptococcus phage IPP22, complete genome	11536-11565	8	0.733
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	NC_013643	Enterococcus phage phiFL2A, complete genome	11288-11317	8	0.733
NC_017576_2	2.7\|1484928\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1484928-1484957	30	CP015514	Vibrio vulnificus strain FORC_036 plasmid unnamed, complete sequence	501300-501329	8	0.733
NC_017576_2	2.8\|1484994\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1484994-1485023	30	NZ_CP035513	Haematobacter massiliensis strain OT1 plasmid pOT1-3, complete sequence	277763-277792	8	0.733
NC_017576_2	2.10\|1485126\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485126-1485155	30	MN694003	Marine virus AFVG_250M677, complete genome	2843-2872	8	0.733
NC_017576_2	2.10\|1485126\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485126-1485155	30	MT133560	Pseudomonas phage fnug, complete genome	10729-10758	8	0.733
NC_017576_2	2.10\|1485126\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485126-1485155	30	MN871489	UNVERIFIED: Pseudomonas phage PaZh_1, complete genome	26060-26089	8	0.733
NC_017576_2	2.11\|1485192\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485192-1485221	30	MN694003	Marine virus AFVG_250M677, complete genome	2843-2872	8	0.733
NC_017576_2	2.11\|1485192\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485192-1485221	30	MT133560	Pseudomonas phage fnug, complete genome	10729-10758	8	0.733
NC_017576_2	2.11\|1485192\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485192-1485221	30	MN871489	UNVERIFIED: Pseudomonas phage PaZh_1, complete genome	26060-26089	8	0.733
NC_017576_2	2.12\|1485258\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485258-1485287	30	MN694003	Marine virus AFVG_250M677, complete genome	2843-2872	8	0.733
NC_017576_2	2.12\|1485258\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485258-1485287	30	MT133560	Pseudomonas phage fnug, complete genome	10729-10758	8	0.733
NC_017576_2	2.12\|1485258\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485258-1485287	30	MN871489	UNVERIFIED: Pseudomonas phage PaZh_1, complete genome	26060-26089	8	0.733
NC_017576_2	2.16\|1485521\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485521-1485550	30	NZ_CP013227	Staphylococcus aureus strain UTSW MRSA 55 plasmid UTSW55_1, complete sequence	5685-5714	8	0.733
NC_017576_2	2.20\|1485785\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485785-1485814	30	NZ_CP012421	Rickettsia amblyommatis strain Ac37 plasmid pRAMAC18, complete sequence	9201-9230	8	0.733
NC_017576_2	2.20\|1485785\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485785-1485814	30	NC_017029	Rickettsia amblyommatis str. GAT-30V plasmid pMCE_2, complete sequence	10671-10700	8	0.733
NC_017576_2	2.20\|1485785\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485785-1485814	30	NC_013938	Candidatus Rickettsia amblyommii AaR/SC plasmid pRAM18, complete sequence	9362-9391	8	0.733
NC_017576_2	2.20\|1485785\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485785-1485814	30	NZ_CP015014	Rickettsia amblyommatis isolate An13 plasmid unnamed_3, complete sequence	9790-9819	8	0.733
NC_017576_2	2.21\|1485851\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485851-1485880	30	NZ_CP041396	Bacteroides ovatus strain 3725 D1 iv plasmid unnamed1, complete sequence	114184-114213	8	0.733
NC_017576_2	2.22\|1485917\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485917-1485946	30	MF288922	Bacillus phage Janet, complete genome	82164-82193	8	0.733
NC_017576_2	2.22\|1485917\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485917-1485946	30	NC_024216	Bacillus phage CAM003, complete genome	80971-81000	8	0.733
NC_017576_2	2.22\|1485917\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485917-1485946	30	KJ489400	Bacillus phage Hoody T, complete genome	80809-80838	8	0.733
NC_017576_2	2.22\|1485917\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485917-1485946	30	NC_024207	Bacillus phage Evoli, complete genome	80699-80728	8	0.733
NC_017576_2	2.22\|1485917\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1485917-1485946	30	MF498901	Bacillus phage Anthony, complete genome	81533-81562	8	0.733
NC_017576_2	2.28\|1486313\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486313-1486342	30	NC_023559	Oenococcus phage phi9805, complete genome	29107-29136	8	0.733
NC_017576_1	1.14\|1477459\|30\|NC_017576\|CRT,PILER-CR	1477459-1477488	30	NC_021529	Vibrio phage nt-1, complete genome	74206-74235	9	0.7
NC_017576_1	1.16\|1477591\|30\|NC_017576\|CRT	1477591-1477620	30	NZ_CP019641	Planococcus sp. Y42 plasmid unnamed1, complete sequence	127829-127858	9	0.7
NC_017576_2	2.1\|1484532\|30\|NC_017576\|CRISPRCasFinder,CRT	1484532-1484561	30	MT497067	Flavobacterium phage vB_Fsp_elemo14-1A, partial genome	385-414	9	0.7
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	KP735928	Staphylococcus phage IME-SA4, complete genome	38776-38805	9	0.7
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	KY779848	Staphylococcus phage qdsa001, complete genome	10471-10500	9	0.7
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	KY653129	Staphylococcus phage IME1365_01, complete genome	13969-13998	9	0.7
NC_017576_2	2.5\|1484796\|30\|NC_017576\|CRISPRCasFinder,CRT	1484796-1484825	30	JN192400	Staphylococcus phage vB_SepiS-phiIPLA5, complete genome	40570-40599	10	0.667
NC_017576_2	2.7\|1484928\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1484928-1484957	30	MK448969	Streptococcus phage Javan514, complete genome	22353-22382	10	0.667
NC_017576_2	2.7\|1484928\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1484928-1484957	30	MK448972	Streptococcus phage Javan520, complete genome	20479-20508	10	0.667
NC_017576_2	2.7\|1484928\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1484928-1484957	30	MK448774	Streptococcus phage Javan487, complete genome	19466-19495	10	0.667
NC_017576_2	2.7\|1484928\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1484928-1484957	30	MK448773	Streptococcus phage Javan485, complete genome	22352-22381	10	0.667
NC_017576_2	2.26\|1486181\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486181-1486210	30	NZ_CP045608	Bacillus cereus strain SB1 plasmid p2, complete sequence	158891-158920	10	0.667
NC_017576_2	2.26\|1486181\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486181-1486210	30	NZ_CP009691	Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence	185196-185225	10	0.667
NC_017576_2	2.26\|1486181\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486181-1486210	30	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	152003-152032	10	0.667
NC_017576_2	2.26\|1486181\|30\|NC_017576\|CRISPRCasFinder,CRT,PILER-CR	1486181-1486210	30	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	483245-483274	10	0.667

1. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP046625 (Streptococcus sp. CNU G3 plasmid p1_CUN_G3, complete sequence) position: , mismatch: 0, identity: 1.0

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
ttgaataaatggtttcaaaagcattatca	Protospacer
*****************************

2. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP046625 (Streptococcus sp. CNU G3 plasmid p1_CUN_G3, complete sequence) position: , mismatch: 0, identity: 1.0

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
ttgaataaatggtttcaaaagcattatcat	Protospacer
******************************

3. spacer 2.16|1485521|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MK448709 (Streptococcus phage Javan231, complete genome) position: , mismatch: 0, identity: 1.0

gcgttttaagctcttgcatataatcttctg	CRISPR spacer
gcgttttaagctcttgcatataatcttctg	Protospacer
******************************

4. spacer 2.16|1485521|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MK448710 (Streptococcus phage Javan233, complete genome) position: , mismatch: 0, identity: 1.0

gcgttttaagctcttgcatataatcttctg	CRISPR spacer
gcgttttaagctcttgcatataatcttctg	Protospacer
******************************

5. spacer 2.16|1485521|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MK448707 (Streptococcus phage Javan227, complete genome) position: , mismatch: 0, identity: 1.0

gcgttttaagctcttgcatataatcttctg	CRISPR spacer
gcgttttaagctcttgcatataatcttctg	Protospacer
******************************

6. spacer 2.18|1485653|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MK448879 (Streptococcus phage Javan226, complete genome) position: , mismatch: 0, identity: 1.0

gtgcatcgttgataaattgcgtttgttgat	CRISPR spacer
gtgcatcgttgataaattgcgtttgttgat	Protospacer
******************************

7. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MH937495 (Streptococcus phage CHPC1045, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

8. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MF580775 (Streptococcus phage V2, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

9. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MH937496 (Streptococcus phage CHPC1046, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

10. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MF580762 (Streptococcus phage 9B4, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

11. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MH937458 (Streptococcus phage CHPC572, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

12. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MH937493 (Streptococcus phage CHPC1041, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

13. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MF580760 (Streptococcus phage 7T, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

14. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MH892379 (Streptococcus phage SWK3, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

15. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MH892359 (Streptococcus phage SW10, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

16. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to KY705263 (Streptococcus phage P7133, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

17. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MH892356 (Streptococcus phage SW21, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

18. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MF580763 (Streptococcus phage 16B8, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

19. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MH892358 (Streptococcus phage SW9, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

20. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MF580772 (Streptococcus phage R1, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

21. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MF580764 (Streptococcus phage 31B4, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

22. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MH937497 (Streptococcus phage CHPC1048, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

23. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MF580759 (Streptococcus phage 7A5, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

24. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MH892352 (Streptococcus phage SW1, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

25. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MH892380 (Streptococcus phage SWK4, complete genome) position: , mismatch: 0, identity: 1.0

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacctgaaaatcagc	Protospacer
******************************

26. spacer 1.10|1477855|28|NC_017576|CRISPRCasFinder,PILER-CR matches to MK448878 (Streptococcus phage Javan224, complete genome) position: , mismatch: 1, identity: 0.964

cagaccgcatttcattccaaagcggtgg	CRISPR spacer
cagaccgcatttcattccaaagtggtgg	Protospacer
**********************.*****

27. spacer 1.20|1477855|29|NC_017576|CRT matches to MK448878 (Streptococcus phage Javan224, complete genome) position: , mismatch: 1, identity: 0.966

cagaccgcatttcattccaaagcggtggt	CRISPR spacer
cagaccgcatttcattccaaagtggtggt	Protospacer
**********************.******

28. spacer 2.10|1485126|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MK448890 (Streptococcus phage Javan264, complete genome) position: , mismatch: 1, identity: 0.967

ttgaactcaaacagacatttgaagaatggt	CRISPR spacer
ttgaactcaagcagacatttgaagaatggt	Protospacer
**********.*******************

29. spacer 2.11|1485192|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MK448890 (Streptococcus phage Javan264, complete genome) position: , mismatch: 1, identity: 0.967

ttgaactcaaacagacatttgaagaatggt	CRISPR spacer
ttgaactcaagcagacatttgaagaatggt	Protospacer
**********.*******************

30. spacer 2.12|1485258|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MK448890 (Streptococcus phage Javan264, complete genome) position: , mismatch: 1, identity: 0.967

ttgaactcaaacagacatttgaagaatggt	CRISPR spacer
ttgaactcaagcagacatttgaagaatggt	Protospacer
**********.*******************

31. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MG708274 (Streptococcus phage vB_SthS_VA214, complete genome) position: , mismatch: 1, identity: 0.967

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacttgaaaatcagc	Protospacer
******************.***********

32. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to KY705256 (Streptococcus phage P3681, complete genome) position: , mismatch: 1, identity: 0.967

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacttgaaaatcagc	Protospacer
******************.***********

33. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MH937461 (Streptococcus phage CHPC642, complete genome) position: , mismatch: 1, identity: 0.967

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acaattcatgtttttaacttgaaaatcagc	Protospacer
******************.***********

34. spacer 2.18|1485653|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MK448874 (Streptococcus phage Javan206, complete genome) position: , mismatch: 2, identity: 0.933

gtgcatcgttgataaattgcgtttgttgat	CRISPR spacer
gtgcatcgttgataaattgcgtttgttgtc	Protospacer
**************************** .

35. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to KY705288 (Streptococcus phage P9901, complete genome) position: , mismatch: 2, identity: 0.933

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
gcagttcatgtttttaacctgaaaatcagc	Protospacer
.**.**************************

36. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MH892381 (Streptococcus phage SWK5, complete genome) position: , mismatch: 2, identity: 0.933

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acagttcatgtttttaacttgaaaatcagc	Protospacer
***.**************.***********

37. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MH892382 (Streptococcus phage SWK6, complete genome) position: , mismatch: 2, identity: 0.933

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
acagttcatgtttttaacttgaaaatcagc	Protospacer
***.**************.***********

38. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP015352 (Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence) position: , mismatch: 4, identity: 0.862

--ttgaataaatggtttcaaaagcattatca	CRISPR spacer
tgttga--aaatggattcaatagcattatca	Protospacer
  ****  ****** ***** **********

39. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MF417900 (Uncultured Caudovirales phage clone 8AX_1, partial genome) position: , mismatch: 4, identity: 0.867

gtaagtttatcccatactctaaattttggt	CRISPR spacer
ttatttttatcccatactctaaatttaggt	Protospacer
 **  ********************* ***

40. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MF417899 (Uncultured Caudovirales phage clone 7S_8, partial genome) position: , mismatch: 4, identity: 0.867

gtaagtttatcccatactctaaattttggt	CRISPR spacer
ttatttttatcccatactctaaatttaggt	Protospacer
 **  ********************* ***

41. spacer 2.17|1485587|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MK448878 (Streptococcus phage Javan224, complete genome) position: , mismatch: 4, identity: 0.867

gatagatgcatcgccaaccgcccaagttaa	CRISPR spacer
aatagaagcatcaccaaccgcccaagttag	Protospacer
.***** *****.****************.

42. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP015352 (Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence) position: , mismatch: 5, identity: 0.833

--ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
tgttga--aaatggattcaatagcattatcaa	Protospacer
  ****  ****** ***** **********

43. spacer 1.18|1477723|30|NC_017576|CRT matches to NZ_CP046714 (Nostoc sp. ATCC 53789 plasmid pNsp_k, complete sequence) position: , mismatch: 5, identity: 0.833

aaaatgg--gtggggctattcctagccaaatt	CRISPR spacer
--agtggctgtgggactactcctagccaaatt	Protospacer
  *.***  *****.***.*************

44. spacer 1.20|1477855|29|NC_017576|CRT matches to NZ_CP031226 (Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence) position: , mismatch: 5, identity: 0.828

cagaccgcatttcattccaaagcggtggt--	CRISPR spacer
caggccgcatctcattccaaagc--tgattg	Protospacer
***.******.************  **.*

45. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to MG969413 (UNVERIFIED: Salmonella phage GE_vB_N8, complete genome) position: , mismatch: 5, identity: 0.833

ttaacagttagtttattatta-acaatatta	CRISPR spacer
ttaatagttagtttattattacccgctatt-	Protospacer
****.****************  *. ****

46. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to MK415403 (CrAssphage ES_ALL_000190F, complete genome) position: , mismatch: 5, identity: 0.833

---ttaacagttagtttattattaacaatatta	CRISPR spacer
aatttacca---agtttattattaacattatta	Protospacer
   *** **   *************** *****

47. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to MK415410 (CrAssphage YS1-2_2437, complete genome) position: , mismatch: 5, identity: 0.833

---ttaacagttagtttattattaacaatatta	CRISPR spacer
aatttacca---agtttattattaacattatta	Protospacer
   *** **   *************** *****

48. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to MT774386 (CrAssphage cr110_1, complete genome) position: , mismatch: 5, identity: 0.833

---ttaacagttagtttattattaacaatatta	CRISPR spacer
aatttaa---tttgtttattattaataatatta	Protospacer
   ****   ** ************.*******

49. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to MT774383 (CrAssphage cr11_1, complete genome) position: , mismatch: 5, identity: 0.833

---ttaacagttagtttattattaacaatatta	CRISPR spacer
aatttaa---tttgtttattattaataatatta	Protospacer
   ****   ** ************.*******

50. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MH542234 (Staphylococcus phage Terranova, complete genome) position: , mismatch: 5, identity: 0.833

gtaagtttatcccatactctaaattttggt	CRISPR spacer
ttttctttatcccatactctaaatttaggt	Protospacer
 *   ********************* ***

51. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 5, identity: 0.833

gtaagtttatcccatactctaaattttggt	CRISPR spacer
cttgattcatcccatactctaaattttggt	Protospacer
 * ..**.**********************

52. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MK449012 (Streptococcus phage Javan94, complete genome) position: , mismatch: 5, identity: 0.833

gtaagtttatcccatactctaaattttggt	CRISPR spacer
ttttctttatcccacactctaaattttggt	Protospacer
 *   *********.***************

53. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 5, identity: 0.833

gtaagtttatcccatactctaaattttggt	CRISPR spacer
cttgattcatcccatactctaaattttggt	Protospacer
 * ..**.**********************

54. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 5, identity: 0.833

gtaagtttatcccatactctaaattttggt	CRISPR spacer
ttttctttatcccacactctaaattttggt	Protospacer
 *   *********.***************

55. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MK448750 (Streptococcus phage Javan393, complete genome) position: , mismatch: 5, identity: 0.833

gtaagtttatcccatactctaaattttggt	CRISPR spacer
gtttttttatcccatactctaaacttcggt	Protospacer
**   ******************.**.***

56. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to NZ_CP014917 (Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-2, complete sequence) position: , mismatch: 5, identity: 0.833

gtaagtttatcccatactctaaattttggt	CRISPR spacer
gtagtgttgtcccacactctaaattttggt	Protospacer
***.  **.*****.***************

57. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to NZ_CP016798 (Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-1, complete sequence) position: , mismatch: 5, identity: 0.833

gtaagttt-atcccatactctaaattttggt	CRISPR spacer
-tgcgtttcgtcccacactctaaattttggt	Protospacer
 *. **** .*****.***************

58. spacer 2.7|1484928|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MK249191 (Blackfly microvirus SF02 isolate 125, complete genome) position: , mismatch: 5, identity: 0.833

ttattttttatgtcgctgtcaatgttagct--	CRISPR spacer
ttattttttaggtcggtgtcaa--ttagcata	Protospacer
********** **** ******  *****

59. spacer 2.16|1485521|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MN694164 (Marine virus AFVG_250M1189, complete genome) position: , mismatch: 5, identity: 0.833

gcgttttaagctcttgcatataatcttctg	CRISPR spacer
tcgtttttagctcttgcatataatcctgta	Protospacer
 ****** *****************.* *.

60. spacer 2.27|1486247|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048281 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence) position: , mismatch: 5, identity: 0.833

-taacgacctttgatttctgtcaattgacct	CRISPR spacer
ataac-atatttgatatctgtcaattgaccg	Protospacer
 **** *. ****** **************

61. spacer 2.27|1486247|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 5, identity: 0.833

taacgac--ctttgatttctgtcaattgacct	CRISPR spacer
--acgacgtatttgatatctgtcaattgaccg	Protospacer
  *****   ****** **************

62. spacer 1.3|1477393|29|NC_017576|CRISPRCasFinder matches to NZ_CP016859 (Staphylococcus aureus subsp. aureus strain 1971.C01 plasmid p1971.C01b, complete sequence) position: , mismatch: 6, identity: 0.793

tctaaactttttagatgaaacagctagac	CRISPR spacer
tctaaacttttttgatgaaccagagacaa	Protospacer
************ ****** ***  * *

63. spacer 1.3|1477393|29|NC_017576|CRISPRCasFinder matches to CP013960 (Staphylococcus aureus strain V605 plasmid pV605, complete sequence) position: , mismatch: 6, identity: 0.793

tctaaactttttagatgaaacagctagac	CRISPR spacer
tctaaacttttttgatgaaccagagacaa	Protospacer
************ ****** ***  * *

64. spacer 1.3|1477393|29|NC_017576|CRISPRCasFinder matches to NZ_LT571450 (Staphylococcus epidermidis isolate BPH0662 plasmid 2) position: , mismatch: 6, identity: 0.793

tctaaactttttagatgaaacagctagac	CRISPR spacer
tctaaacttttttgatgaaccagagacaa	Protospacer
************ ****** ***  * *

65. spacer 1.3|1477393|29|NC_017576|CRISPRCasFinder matches to NC_013374 (Staphylococcus epidermidis plasmid SAP045A, complete sequence) position: , mismatch: 6, identity: 0.793

tctaaactttttagatgaaacagctagac	CRISPR spacer
tctaaacttttttgatgaaccagagacaa	Protospacer
************ ****** ***  * *

66. spacer 1.3|1477393|29|NC_017576|CRISPRCasFinder matches to NZ_KY465818 (Staphylococcus aureus subsp. aureus strain CC1 plasmid p140355, complete sequence) position: , mismatch: 6, identity: 0.793

tctaaactttttagatgaaacagctagac	CRISPR spacer
tctaaacttttttgatgaaccagagacaa	Protospacer
************ ****** ***  * *

67. spacer 1.3|1477393|29|NC_017576|CRISPRCasFinder matches to NZ_KU882686 (Staphylococcus lugdunensis strain Tlug63N-4 plasmid pT63N, complete sequence) position: , mismatch: 6, identity: 0.793

tctaaactttttagatgaaacagctagac	CRISPR spacer
tctaaacttttttgatgaaccagagacaa	Protospacer
************ ****** ***  * *

68. spacer 1.3|1477393|29|NC_017576|CRISPRCasFinder matches to NZ_CP033813 (Staphylococcus haemolyticus strain FDAARGOS_517 plasmid unnamed2) position: , mismatch: 6, identity: 0.793

tctaaactttttagatgaaacagctagac	CRISPR spacer
tctaaacttttttgatgaaccagagacaa	Protospacer
************ ****** ***  * *

69. spacer 1.3|1477393|29|NC_017576|CRISPRCasFinder matches to NZ_LR027871 (Staphylococcus aureus strain BPH2019 isolate BPH2019 plasmid 2) position: , mismatch: 6, identity: 0.793

tctaaactttttagatgaaacagctagac	CRISPR spacer
tctaaacttttttgatgaaccagagacaa	Protospacer
************ ****** ***  * *

70. spacer 1.3|1477393|29|NC_017576|CRISPRCasFinder matches to NC_010279 (Staphylococcus aureus plasmid pV030-8, complete sequence) position: , mismatch: 6, identity: 0.793

tctaaactttttagatgaaacagctagac	CRISPR spacer
tctaaacttttttgatgaaccagagacaa	Protospacer
************ ****** ***  * *

71. spacer 1.3|1477393|29|NC_017576|CRISPRCasFinder matches to NZ_CP014118 (Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.793

tctaaactttttagatgaaacagctagac	CRISPR spacer
tctaaacttttttgatgaaccagagacaa	Protospacer
************ ****** ***  * *

72. spacer 1.3|1477393|29|NC_017576|CRISPRCasFinder matches to NZ_CP031887 (Staphylococcus aureus strain CFSAN082783 plasmid pMRSA_24, complete sequence) position: , mismatch: 6, identity: 0.793

tctaaactttttagatgaaacagctagac	CRISPR spacer
tctaaacttttttgatgaaccagagacaa	Protospacer
************ ****** ***  * *

73. spacer 1.3|1477393|29|NC_017576|CRISPRCasFinder matches to NZ_CP029661 (Staphylococcus aureus strain AR_0228 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.793

tctaaactttttagatgaaacagctagac	CRISPR spacer
tctaaacttttttgatgaaccagagacaa	Protospacer
************ ****** ***  * *

74. spacer 1.4|1477459|29|NC_017576|CRISPRCasFinder matches to MN131137 (Aeromonas phage D6, complete genome) position: , mismatch: 6, identity: 0.793

acaaactatagtttaacagctaaggaagt	CRISPR spacer
atcacttatagcgtaacagctaaggaagt	Protospacer
*. * .*****. ****************

75. spacer 1.4|1477459|29|NC_017576|CRISPRCasFinder matches to MK838116 (Aeromonas phage LAh10, complete genome) position: , mismatch: 6, identity: 0.793

acaaactatagtttaacagctaaggaagt	CRISPR spacer
atcacttatagcgtaacagctaaggaagt	Protospacer
*. * .*****. ****************

76. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP041625 (Escherichia coli O157:H7 strain ATCC 43888 plasmid p35K_like, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

77. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP028594 (Escherichia coli strain 150 plasmid pTA150-2, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

78. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP020924 (Salmonella enterica subsp. enterica strain 16A242 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

79. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP028605 (Escherichia coli strain 144 plasmid pTA144-2, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

80. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP038307 (Escherichia coli O157:H7 strain SS NE 1040-1 plasmid pNE1040-3, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

81. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP038311 (Escherichia coli O157:H7 strain Show KS 470-1 plasmid pKS470-3, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

82. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP038303 (Escherichia coli O157:H7 strain SS TX 313-1 plasmid pTX313-2, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

83. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP038337 (Escherichia coli O157:H7 strain LSU61 plasmid pLSU61-2, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

84. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_AP018807 (Escherichia coli strain E2863 plasmid pE2863-5, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

85. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP025752 (Escherichia coli strain CV839-06 plasmid pCV839-06-p2, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

86. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP015284 (Streptococcus salivarius strain ATCC 25975 plasmid, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
tttcatcaatggtttccaaagcattattt	Protospacer
**  ** ********* **********.

87. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP022051 (Escherichia coli O157 strain FDAARGOS_293 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

88. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP038317 (Escherichia coli O157:H7 strain NE92 plasmid pNE92-2, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

89. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_MG904994 (Escherichia coli strain 14OD0056 plasmid p14ODV, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

90. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP042629 (Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-2, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

91. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP038409 (Escherichia coli O157:H7 strain 86-24 plasmid p86-24-2, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

92. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagca-ttatca	CRISPR spacer
gacgataaatggtttcaaaatcatttatc-	Protospacer
   .**************** ** *****

93. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP038367 (Escherichia coli O157:H7 strain F6667 plasmid pF6667-2, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

94. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP007599 (Salmonella enterica subsp. enterica serovar Enteritidis str. 77-1427 plasmid pCFSAN000111_01, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

95. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

96. spacer 1.7|1477657|29|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP015845 (Escherichia coli O157:H7 strain FRIK2455 plasmid p35K, complete sequence) position: , mismatch: 6, identity: 0.793

ttgaataaatggtttcaaaagcattatca	CRISPR spacer
atttatgaatggtttcaaaagcaatatga	Protospacer
 *  **.**************** *** *

97. spacer 1.10|1477855|28|NC_017576|CRISPRCasFinder,PILER-CR matches to NZ_CP031226 (Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence) position: , mismatch: 6, identity: 0.786

cagaccgcatttcattccaaagcggtgg	CRISPR spacer
caggccgcatctcattccaaagctgatt	Protospacer
***.******.************ *

98. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to CP033536 (Acinetobacter pittii strain 2012N21-164 plasmid p2012N21-164-1, complete sequence) position: , mismatch: 6, identity: 0.8

ttaac--agttagtttattattaacaatatta	CRISPR spacer
--aattgaatcagtttatttttaacaatatta	Protospacer
  **.  *.*.******** ************

99. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to CP033532 (Acinetobacter pittii strain 2014S07-126 plasmid p2014S07-126-2, complete sequence) position: , mismatch: 6, identity: 0.8

ttaac--agttagtttattattaacaatatta	CRISPR spacer
--aattgaatcagtttatttttaacaatatta	Protospacer
  **.  *.*.******** ************

100. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to NZ_CP026087 (Acinetobacter pittii strain WCHAP005069 plasmid p1_005069, complete sequence) position: , mismatch: 6, identity: 0.8

ttaac--agttagtttattattaacaatatta	CRISPR spacer
--aattgaatcagtttatttttaacaatatta	Protospacer
  **.  *.*.******** ************

101. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to NC_025173 (Acinetobacter pittii strain MS32 plasmid pMS32-1, complete sequence) position: , mismatch: 6, identity: 0.8

ttaac--agttagtttattattaacaatatta	CRISPR spacer
--aattgaatcagtttatttttaacaatatta	Protospacer
  **.  *.*.******** ************

102. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to NC_010404 (Acinetobacter baumannii AYE plasmid p3ABAYE, complete sequence) position: , mismatch: 6, identity: 0.8

ttaac--agttagtttattattaacaatatta	CRISPR spacer
--aattgaatcagtttatttttaacaatatta	Protospacer
  **.  *.*.******** ************

103. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to NZ_CP010369 (Acinetobacter nosocomialis strain 6411 plasmid p6411-89.111kb, complete sequence) position: , mismatch: 6, identity: 0.8

ttaac--agttagtttattattaacaatatta	CRISPR spacer
--aattgaatcagtttatttttaacaatatta	Protospacer
  **.  *.*.******** ************

104. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to NZ_CP027251 (Acinetobacter pittii strain WCHAP100020 plasmid p1_100020, complete sequence) position: , mismatch: 6, identity: 0.8

ttaac--agttagtttattattaacaatatta	CRISPR spacer
--aattgaatcagtttatttttaacaatatta	Protospacer
  **.  *.*.******** ************

105. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to NZ_CP043054 (Acinetobacter pittii strain AP43 plasmid pAP43-2, complete sequence) position: , mismatch: 6, identity: 0.8

ttaac--agttagtttattattaacaatatta	CRISPR spacer
--aattgaatcagtttatttttaacaatatta	Protospacer
  **.  *.*.******** ************

106. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to KX532239 (Staphylococcus phage StAP1, complete genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
gattctttatcccatgctctaaatttcggt	Protospacer
*    **********.**********.***

107. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to LC492751 (Staphylococcus phage KSAP7 genomic DNA, compelete genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
gattctttatcccatgctctaaatttcggt	Protospacer
*    **********.**********.***

108. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to LC492752 (Staphylococcus phage KSAP11 genomic DNA, compelete genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
gattctttatcccatgctctaaatttcggt	Protospacer
*    **********.**********.***

109. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to AP019522 (Staphylococcal phage MR003 DNA, complete genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
gattctttatcccatgctctaaatttcggt	Protospacer
*    **********.**********.***

110. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to NC_007021 (Staphylococcus phage Twort, complete genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
tttcttttatcccacactctaaatttcggt	Protospacer
 *   *********.***********.***

111. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to NC_022090 (Staphylococcus phage vB_SauM_Remus, complete genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
gattctttatcccatgctctaaatttcggt	Protospacer
*    **********.**********.***

112. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to KP881332 (Staphylococcus phage Stau2, complete genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
gattctttatcccatgctctaaatttcggt	Protospacer
*    **********.**********.***

113. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MT080595 (UNVERIFIED: Staphylococcus phage vB_SauM_EW41, partial genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
gattctttatcccatgctctaaatttcggt	Protospacer
*    **********.**********.***

114. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MT151386 (Staphylococcus virus Twort, complete genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
tttcttttatcccacactctaaatttcggt	Protospacer
 *   *********.***********.***

115. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to NC_020877 (Staphylococcus phage vB_SauM_Romulus, complete genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
gattctttatcccatgctctaaatttcggt	Protospacer
*    **********.**********.***

116. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MK449000 (Streptococcus phage Javan64, complete genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
tgagttttatcccacgctctaaattttggt	Protospacer
  *. *********..**************

117. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to AP019561 (Staphylococcus phage SP197 DNA, complete genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
cttcttttatcccatgctctaaatttgggt	Protospacer
 *   **********.********** ***

118. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to NC_007051 (Staphylococcus phage 2638A, complete genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
tcagttttatcccatgctctaaatttgggt	Protospacer
 .*. **********.********** ***

119. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to JX194239 (Staphylococcus phage SA11, complete genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
gattctttatcccatgctctaaatttcggt	Protospacer
*    **********.**********.***

120. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MK450538 (Staphylococcus phage vB_SpsS_QT1, complete genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
tcagttttatcccatgctctaaatttgggt	Protospacer
 .*. **********.********** ***

121. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MK075005 (Staphylococcus phage phiSP119-2, partial genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
tcagttttatcccatgctctaaatttgggt	Protospacer
 .*. **********.********** ***

122. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MK075002 (Staphylococcus phage phiSP38-1, complete genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
tcagttttatcccatgctctaaatttgggt	Protospacer
 .*. **********.********** ***

123. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to AY954954 (Bacteriophage 2638A, complete genome) position: , mismatch: 6, identity: 0.8

gtaagtttatcccatactctaaattttggt	CRISPR spacer
tcagttttatcccatgctctaaatttgggt	Protospacer
 .*. **********.********** ***

124. spacer 2.7|1484928|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035950 ('Catharanthus roseus' aster yellows phytoplasma strain De Villa plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

ttattttttatgtcgctgtcaatg---ttagct	CRISPR spacer
ttatttttgatttcgctgtcaatacactta---	Protospacer
******** ** ***********.   ***

125. spacer 2.22|1485917|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MG945913 (UNVERIFIED: Microviridae sp. isolate 8824-1602, partial genome) position: , mismatch: 6, identity: 0.8

gccgctttctgaacttcgacacgtacagct	CRISPR spacer
gacgctttctgaacttcgagacgcctatct	Protospacer
* ***************** ***. .* **

126. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009650 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence) position: , mismatch: 6, identity: 0.8

acaattcatgtttttaacctgaaaat-cagc	CRISPR spacer
ggcattcatgattttaacctaaaaatgcag-	Protospacer
.  ******* *********.***** ***

127. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028104 (Fusobacterium varium ATCC 27725 plasmid pFvar_27725, complete sequence) position: , mismatch: 6, identity: 0.8

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
atattcaaggtttttaccctgaaaatcagc	Protospacer
*.* *. * ******* *************

128. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007625 (Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

acaattcatgtttttaacctgaaaat-cagc	CRISPR spacer
ggcattcatgattttaacctaaaaatgcag-	Protospacer
.  ******* *********.***** ***

129. spacer 1.1|1477261|29|NC_017576|CRISPRCasFinder matches to NZ_CP025540 (Vibrio harveyi strain 345 plasmid p345-67, complete sequence) position: , mismatch: 7, identity: 0.759

ggtagaacagcaattgtacaaccttgacc	CRISPR spacer
gatagaacagcaatggtacaaccaaaggc	Protospacer
*.************ ********  .. *

130. spacer 1.4|1477459|29|NC_017576|CRISPRCasFinder matches to NC_031070 (Bacillus phage Nemo, complete genome) position: , mismatch: 7, identity: 0.759

acaaactatagtttaacagctaaggaagt	CRISPR spacer
acacactctagtttaacagctaaccctgc	Protospacer
*** *** ***************    *.

131. spacer 1.4|1477459|29|NC_017576|CRISPRCasFinder matches to MF288919 (Bacillus phage AaronPhadgers, complete genome) position: , mismatch: 7, identity: 0.759

acaaactatagtttaacagctaaggaagt	CRISPR spacer
acacactctagtttaacagctaaccccgc	Protospacer
*** *** ***************    *.

132. spacer 1.4|1477459|29|NC_017576|CRISPRCasFinder matches to NC_031024 (Bacillus phage Belinda, complete genome) position: , mismatch: 7, identity: 0.759

acaaactatagtttaacagctaaggaagt	CRISPR spacer
acacactctagtttaacagctaaccccgc	Protospacer
*** *** ***************    *.

133. spacer 1.4|1477459|29|NC_017576|CRISPRCasFinder matches to MH638311 (Bacillus phage OmnioDeoPrimus, complete genome) position: , mismatch: 7, identity: 0.759

acaaactatagtttaacagctaaggaagt	CRISPR spacer
acacactctagtttaacagctaaccctgc	Protospacer
*** *** ***************    *.

134. spacer 1.4|1477459|29|NC_017576|CRISPRCasFinder matches to MF288918 (Bacillus phage Bubs, complete genome) position: , mismatch: 7, identity: 0.759

acaaactatagtttaacagctaaggaagt	CRISPR spacer
acacactctagtttaacagctaaccctgc	Protospacer
*** *** ***************    *.

135. spacer 1.5|1477525|29|NC_017576|CRISPRCasFinder matches to MN856003 (Bacteriophage sp. isolate 1, complete genome) position: , mismatch: 7, identity: 0.759

ttaagtcgccacatattaacgcctgctga	CRISPR spacer
cccattcgccacatataaacacctgctgc	Protospacer
.. * *********** ***.*******

136. spacer 1.6|1477591|29|NC_017576|CRISPRCasFinder matches to MN078104 (Bacteroides phage Barc2635, complete genome) position: , mismatch: 7, identity: 0.759

tgacaattgaaaacgcaaacgagcaaata	CRISPR spacer
tcccggttgaaaatgcaaacgagcaaaat	Protospacer
*  *..*******.*************

137. spacer 1.6|1477591|29|NC_017576|CRISPRCasFinder matches to FJ008913 (Bacteroides phage B40-8 culture-collection ATCC:51477-B1, complete genome) position: , mismatch: 7, identity: 0.759

tgacaattgaaaacgcaaacgagcaaata	CRISPR spacer
tcccggttgaaaatgcaaacgagcaaaat	Protospacer
*  *..*******.*************

138. spacer 1.6|1477591|29|NC_017576|CRISPRCasFinder matches to NC_011222 (Bacteroides phage B40-8, complete genome) position: , mismatch: 7, identity: 0.759

tgacaattgaaaacgcaaacgagcaaata	CRISPR spacer
tcccggttgaaaatgcaaacgagcaaaat	Protospacer
*  *..*******.*************

139. spacer 1.6|1477591|29|NC_017576|CRISPRCasFinder matches to NC_016770 (Bacteroides phage B124-14, complete genome) position: , mismatch: 7, identity: 0.759

tgacaattgaaaacgcaaacgagcaaata	CRISPR spacer
tcccggttgaaaatgcaaacgagcaaaat	Protospacer
*  *..*******.*************

140. spacer 1.6|1477591|29|NC_017576|CRISPRCasFinder matches to HE608841 (Bacteroides phage B124-14 complete genome) position: , mismatch: 7, identity: 0.759

tgacaattgaaaacgcaaacgagcaaata	CRISPR spacer
tcccggttgaaaatgcaaacgagcaaaat	Protospacer
*  *..*******.*************

141. spacer 1.6|1477591|29|NC_017576|CRISPRCasFinder matches to MT630433 (Bacteroides phage vB_BfrS_23, complete genome) position: , mismatch: 7, identity: 0.759

tgacaattgaaaacgcaaacgagcaaata	CRISPR spacer
tcccggttgaaaatgcaaacgagcaaaat	Protospacer
*  *..*******.*************

142. spacer 1.11|1477261|30|NC_017576|CRT matches to NZ_CP025540 (Vibrio harveyi strain 345 plasmid p345-67, complete sequence) position: , mismatch: 7, identity: 0.767

ggtagaacagcaattgtacaaccttgacca	CRISPR spacer
gatagaacagcaatggtacaaccaaaggca	Protospacer
*.************ ********  .. **

143. spacer 1.13|1477393|30|NC_017576|CRT,PILER-CR matches to NZ_KY465818 (Staphylococcus aureus subsp. aureus strain CC1 plasmid p140355, complete sequence) position: , mismatch: 7, identity: 0.767

tctaaactttttagatgaaacagctagact	CRISPR spacer
tctaaacttttttgatgaaccagagacaaa	Protospacer
************ ****** ***  * *

144. spacer 1.13|1477393|30|NC_017576|CRT,PILER-CR matches to NZ_KU882686 (Staphylococcus lugdunensis strain Tlug63N-4 plasmid pT63N, complete sequence) position: , mismatch: 7, identity: 0.767

tctaaactttttagatgaaacagctagact	CRISPR spacer
tctaaacttttttgatgaaccagagacaaa	Protospacer
************ ****** ***  * *

145. spacer 1.13|1477393|30|NC_017576|CRT,PILER-CR matches to NZ_CP033813 (Staphylococcus haemolyticus strain FDAARGOS_517 plasmid unnamed2) position: , mismatch: 7, identity: 0.767

tctaaactttttagatgaaacagctagact	CRISPR spacer
tctaaacttttttgatgaaccagagacaaa	Protospacer
************ ****** ***  * *

146. spacer 1.13|1477393|30|NC_017576|CRT,PILER-CR matches to NZ_LR027871 (Staphylococcus aureus strain BPH2019 isolate BPH2019 plasmid 2) position: , mismatch: 7, identity: 0.767

tctaaactttttagatgaaacagctagact	CRISPR spacer
tctaaacttttttgatgaaccagagacaaa	Protospacer
************ ****** ***  * *

147. spacer 1.13|1477393|30|NC_017576|CRT,PILER-CR matches to NC_010279 (Staphylococcus aureus plasmid pV030-8, complete sequence) position: , mismatch: 7, identity: 0.767

tctaaactttttagatgaaacagctagact	CRISPR spacer
tctaaacttttttgatgaaccagagacaaa	Protospacer
************ ****** ***  * *

148. spacer 1.13|1477393|30|NC_017576|CRT,PILER-CR matches to NZ_CP014118 (Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tctaaactttttagatgaaacagctagact	CRISPR spacer
tctaaacttttttgatgaaccagagacaaa	Protospacer
************ ****** ***  * *

149. spacer 1.13|1477393|30|NC_017576|CRT,PILER-CR matches to NZ_CP031887 (Staphylococcus aureus strain CFSAN082783 plasmid pMRSA_24, complete sequence) position: , mismatch: 7, identity: 0.767

tctaaactttttagatgaaacagctagact	CRISPR spacer
tctaaacttttttgatgaaccagagacaaa	Protospacer
************ ****** ***  * *

150. spacer 1.13|1477393|30|NC_017576|CRT,PILER-CR matches to NZ_CP029661 (Staphylococcus aureus strain AR_0228 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tctaaactttttagatgaaacagctagact	CRISPR spacer
tctaaacttttttgatgaaccagagacaaa	Protospacer
************ ****** ***  * *

151. spacer 1.13|1477393|30|NC_017576|CRT,PILER-CR matches to NZ_CP016859 (Staphylococcus aureus subsp. aureus strain 1971.C01 plasmid p1971.C01b, complete sequence) position: , mismatch: 7, identity: 0.767

tctaaactttttagatgaaacagctagact	CRISPR spacer
tctaaacttttttgatgaaccagagacaaa	Protospacer
************ ****** ***  * *

152. spacer 1.13|1477393|30|NC_017576|CRT,PILER-CR matches to CP013960 (Staphylococcus aureus strain V605 plasmid pV605, complete sequence) position: , mismatch: 7, identity: 0.767

tctaaactttttagatgaaacagctagact	CRISPR spacer
tctaaacttttttgatgaaccagagacaaa	Protospacer
************ ****** ***  * *

153. spacer 1.13|1477393|30|NC_017576|CRT,PILER-CR matches to NZ_LT571450 (Staphylococcus epidermidis isolate BPH0662 plasmid 2) position: , mismatch: 7, identity: 0.767

tctaaactttttagatgaaacagctagact	CRISPR spacer
tctaaacttttttgatgaaccagagacaaa	Protospacer
************ ****** ***  * *

154. spacer 1.13|1477393|30|NC_017576|CRT,PILER-CR matches to NC_013374 (Staphylococcus epidermidis plasmid SAP045A, complete sequence) position: , mismatch: 7, identity: 0.767

tctaaactttttagatgaaacagctagact	CRISPR spacer
tctaaacttttttgatgaaccagagacaaa	Protospacer
************ ****** ***  * *

155. spacer 1.14|1477459|30|NC_017576|CRT,PILER-CR matches to MN131137 (Aeromonas phage D6, complete genome) position: , mismatch: 7, identity: 0.767

acaaactatagtttaacagctaaggaagtt	CRISPR spacer
atcacttatagcgtaacagctaaggaagtg	Protospacer
*. * .*****. ****************

156. spacer 1.14|1477459|30|NC_017576|CRT,PILER-CR matches to MK838116 (Aeromonas phage LAh10, complete genome) position: , mismatch: 7, identity: 0.767

acaaactatagtttaacagctaaggaagtt	CRISPR spacer
atcacttatagcgtaacagctaaggaagtg	Protospacer
*. * .*****. ****************

157. spacer 1.15|1477525|30|NC_017576|CRT matches to MN856003 (Bacteriophage sp. isolate 1, complete genome) position: , mismatch: 7, identity: 0.767

ttaagtcgccacatattaacgcctgctgaa	CRISPR spacer
cccattcgccacatataaacacctgctgca	Protospacer
.. * *********** ***.******* *

158. spacer 1.16|1477591|30|NC_017576|CRT matches to NC_016770 (Bacteroides phage B124-14, complete genome) position: , mismatch: 7, identity: 0.767

tgacaattgaaaacgcaaacgagcaaatat	CRISPR spacer
tcccggttgaaaatgcaaacgagcaaaatt	Protospacer
*  *..*******.*************  *

159. spacer 1.16|1477591|30|NC_017576|CRT matches to HE608841 (Bacteroides phage B124-14 complete genome) position: , mismatch: 7, identity: 0.767

tgacaattgaaaacgcaaacgagcaaatat	CRISPR spacer
tcccggttgaaaatgcaaacgagcaaaatt	Protospacer
*  *..*******.*************  *

160. spacer 1.16|1477591|30|NC_017576|CRT matches to MT630433 (Bacteroides phage vB_BfrS_23, complete genome) position: , mismatch: 7, identity: 0.767

tgacaattgaaaacgcaaacgagcaaatat	CRISPR spacer
tcccggttgaaaatgcaaacgagcaaaatt	Protospacer
*  *..*******.*************  *

161. spacer 1.16|1477591|30|NC_017576|CRT matches to MN078104 (Bacteroides phage Barc2635, complete genome) position: , mismatch: 7, identity: 0.767

tgacaattgaaaacgcaaacgagcaaatat	CRISPR spacer
tcccggttgaaaatgcaaacgagcaaaatt	Protospacer
*  *..*******.*************  *

162. spacer 1.16|1477591|30|NC_017576|CRT matches to FJ008913 (Bacteroides phage B40-8 culture-collection ATCC:51477-B1, complete genome) position: , mismatch: 7, identity: 0.767

tgacaattgaaaacgcaaacgagcaaatat	CRISPR spacer
tcccggttgaaaatgcaaacgagcaaaatt	Protospacer
*  *..*******.*************  *

163. spacer 1.16|1477591|30|NC_017576|CRT matches to NC_011222 (Bacteroides phage B40-8, complete genome) position: , mismatch: 7, identity: 0.767

tgacaattgaaaacgcaaacgagcaaatat	CRISPR spacer
tcccggttgaaaatgcaaacgagcaaaatt	Protospacer
*  *..*******.*************  *

164. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP046399 (Bacillus sp. A260 plasmid unnamed11, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
tttgggtaatggcttcaaaagaattatcat	Protospacer
** ..  *****.******** ********

165. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP041625 (Escherichia coli O157:H7 strain ATCC 43888 plasmid p35K_like, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

166. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP028594 (Escherichia coli strain 150 plasmid pTA150-2, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

167. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP020924 (Salmonella enterica subsp. enterica strain 16A242 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

168. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP028605 (Escherichia coli strain 144 plasmid pTA144-2, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

169. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP038307 (Escherichia coli O157:H7 strain SS NE 1040-1 plasmid pNE1040-3, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

170. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP038311 (Escherichia coli O157:H7 strain Show KS 470-1 plasmid pKS470-3, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

171. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP038303 (Escherichia coli O157:H7 strain SS TX 313-1 plasmid pTX313-2, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

172. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP038337 (Escherichia coli O157:H7 strain LSU61 plasmid pLSU61-2, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

173. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_AP018807 (Escherichia coli strain E2863 plasmid pE2863-5, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

174. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP025752 (Escherichia coli strain CV839-06 plasmid pCV839-06-p2, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

175. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP015284 (Streptococcus salivarius strain ATCC 25975 plasmid, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
tttcatcaatggtttccaaagcattattta	Protospacer
**  ** ********* **********.

176. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP022051 (Escherichia coli O157 strain FDAARGOS_293 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

177. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP038317 (Escherichia coli O157:H7 strain NE92 plasmid pNE92-2, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

178. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_MG904994 (Escherichia coli strain 14OD0056 plasmid p14ODV, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

179. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP042629 (Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-2, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

180. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP038409 (Escherichia coli O157:H7 strain 86-24 plasmid p86-24-2, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

181. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagca-ttatcat	CRISPR spacer
gacgataaatggtttcaaaatcatttatcg-	Protospacer
   .**************** ** *****.

182. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP038367 (Escherichia coli O157:H7 strain F6667 plasmid pF6667-2, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

183. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP007599 (Salmonella enterica subsp. enterica serovar Enteritidis str. 77-1427 plasmid pCFSAN000111_01, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

184. spacer 1.17|1477657|30|NC_017576|CRT matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

185. spacer 1.17|1477657|30|NC_017576|CRT matches to NZ_CP015845 (Escherichia coli O157:H7 strain FRIK2455 plasmid p35K, complete sequence) position: , mismatch: 7, identity: 0.767

ttgaataaatggtttcaaaagcattatcat	CRISPR spacer
atttatgaatggtttcaaaagcaatatgag	Protospacer
 *  **.**************** *** *

186. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to MK448939 (Streptococcus phage Javan440, complete genome) position: , mismatch: 7, identity: 0.767

ttaacagttagtttattattaacaatatta	CRISPR spacer
tgaacagtttgttttttattaacaacgaca	Protospacer
* ******* **** **********.. .*

187. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to MK448758 (Streptococcus phage Javan433, complete genome) position: , mismatch: 7, identity: 0.767

ttaacagttagtttattattaacaatatta	CRISPR spacer
tgaacagtttgttttttattaacaacgaca	Protospacer
* ******* **** **********.. .*

188. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to MK448759 (Streptococcus phage Javan439, complete genome) position: , mismatch: 7, identity: 0.767

ttaacagttagtttattattaacaatatta	CRISPR spacer
tgaacagtttgttttttattaacaacgaca	Protospacer
* ******* **** **********.. .*

189. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to MK448757 (Streptococcus phage Javan427, complete genome) position: , mismatch: 7, identity: 0.767

ttaacagttagtttattattaacaatatta	CRISPR spacer
tgaacagtttgttttttattaacaacgaca	Protospacer
* ******* **** **********.. .*

190. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to MK448912 (Streptococcus phage Javan340, complete genome) position: , mismatch: 7, identity: 0.767

ttaacagttagtttattattaacaatatta	CRISPR spacer
tgaacagtttgttttttattaacaacgaca	Protospacer
* ******* **** **********.. .*

191. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to KY065449 (Streptococcus phage IPP5, complete genome) position: , mismatch: 7, identity: 0.767

ttaacagttagtttattattaacaatatta	CRISPR spacer
tgaacagtttgttttttattaacaacgaca	Protospacer
* ******* **** **********.. .*

192. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to MH552532 (Siphoviridae sp. isolate ctbf3, complete genome) position: , mismatch: 7, identity: 0.767

ttaacagttagtttattattaacaatatta	CRISPR spacer
aaaccttttagtttattataaactatatta	Protospacer
  * *  ************ *** ******

193. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to NZ_CP014913 (Lactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-1, complete sequence) position: , mismatch: 7, identity: 0.767

gtaagtttatcccatactctaaattttggt	CRISPR spacer
tgttctttgtcccacactctaaattttggt	Protospacer
     ***.*****.***************

194. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 7, identity: 0.767

gtaagtttatcccatactctaaattttggt	CRISPR spacer
cgtagtttatcccatactttaatttttgac	Protospacer
   ***************.*** *****..

195. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to NZ_CP014925 (Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-1, complete sequence) position: , mismatch: 7, identity: 0.767

gtaagtttatcccatactctaaattttggt	CRISPR spacer
tgttctttgtcccacactctaaattttggt	Protospacer
     ***.*****.***************

196. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to KY065496 (Streptococcus phage IPP60, complete genome) position: , mismatch: 7, identity: 0.767

gtaagtttatcccatactctaaattttggt	CRISPR spacer
cctatttttacccatactctaaattttgga	Protospacer
 . * ***  *******************

197. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MK448754 (Streptococcus phage Javan411, complete genome) position: , mismatch: 7, identity: 0.767

gtaagtttatcccatactctaaattttggt	CRISPR spacer
tgattcttatcccaagctctaaattttggt	Protospacer
  *  .******** .**************

198. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MK448929 (Streptococcus phage Javan400, complete genome) position: , mismatch: 7, identity: 0.767

gtaagtttatcccatactctaaattttggt	CRISPR spacer
tgattcttatcccaagctctaaattttggt	Protospacer
  *  .******** .**************

199. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 7, identity: 0.767

gtaagtttatcccatactctaaattttggt	CRISPR spacer
ttgctcttatcccatgccctaaattttggt	Protospacer
 *.  .*********.*.************

200. spacer 2.7|1484928|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049117 (Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

ttattttttatgtcgctgtcaatgttagct	CRISPR spacer
ttgttttttatgtcgccgtcaatgccgttt	Protospacer
**.*************.*******... .*

201. spacer 2.7|1484928|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035035 (Pantoea ananatis strain NN08200 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ttattttttatgtcgctgtcaatgttagct	CRISPR spacer
ttgttttttatgtcgccgtcaatgccgttt	Protospacer
**.*************.*******... .*

202. spacer 2.13|1485324|29|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014792 (Borrelia hermsii HS1 isolate Browne Mountain plasmid lpB58, complete sequence) position: , mismatch: 7, identity: 0.759

tgtataaaagctttaacactaacgttgtt	CRISPR spacer
aataaaaaagctttaaaactaacgtttag	Protospacer
 .** *********** *********

203. spacer 2.20|1485785|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NC_009897 (Rickettsia massiliae MTU5 plasmid pRMA, complete sequence) position: , mismatch: 7, identity: 0.767

tagtcagtagctccttttttgttattattt	CRISPR spacer
tttacagaagctccttttttgttattagaa	Protospacer
*   *** *******************

204. spacer 2.20|1485785|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013135 (Rickettsia rhipicephali strain HJ#5 plasmid pHJ52 sequence) position: , mismatch: 7, identity: 0.767

tagtcagtagctccttttttgttattattt	CRISPR spacer
tttacagaagctccttttttgttattagaa	Protospacer
*   *** *******************

205. spacer 2.20|1485785|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NC_017055 (Rickettsia rhipicephali str. 3-7-female6-CWPP plasmid pMCC_1, complete sequence) position: , mismatch: 7, identity: 0.767

tagtcagtagctccttttttgttattattt	CRISPR spacer
tttacagaagctccttttttgttattagaa	Protospacer
*   *** *******************

206. spacer 2.20|1485785|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MN694211 (Marine virus AFVG_250M746, complete genome) position: , mismatch: 7, identity: 0.767

tagtcagtagctccttttttgttattattt	CRISPR spacer
tagtcagtaactcctttttttttagctaat	Protospacer
*********.********** *** .   *

207. spacer 2.20|1485785|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NC_015418 (Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence) position: , mismatch: 7, identity: 0.767

tagtcagtagctccttttttgttattattt	CRISPR spacer
aagatagtagtttcttttttgttattataa	Protospacer
 ** .*****.*.***************

208. spacer 2.21|1485851|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to LC487410 (Vibrio phage KIT04 DNA, complete genome) position: , mismatch: 7, identity: 0.767

aaattaattttcacagtaaaaacctacagc	CRISPR spacer
aaatcaattttcatagtaaaaaccctcgct	Protospacer
****.********.**********. *. .

209. spacer 2.23|1485983|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NC_009926 (Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence) position: , mismatch: 7, identity: 0.767

acctccgccaatcaatgtgcctagtggttt	CRISPR spacer
acctccgccaatcattttgcctagagagcc	Protospacer
************** * ******* *. ..

210. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MN855855 (Bacteriophage sp. isolate 263, complete genome) position: , mismatch: 7, identity: 0.767

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
aatattcatgtttttaacaagaaaatcgtt	Protospacer
*  ***************  *******. .

211. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to HM596271 (Leuconostoc phage phiMH1, partial genome) position: , mismatch: 7, identity: 0.767

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
aatattcatgtttttaacaagaaaatcgtt	Protospacer
*  ***************  *******. .

212. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to CP053577 (Salmonella enterica strain 2012K-0845 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
gggattcatgtttttcccctgaaaatacgc	Protospacer
. .************  *********  **

213. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022492 (Salmonella enterica subsp. enterica serovar Saintpaul strain SA20031783 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
gggattcatgtttttcccctgaaaatacgc	Protospacer
. .************  *********  **

214. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019182 (Salmonella enterica subsp. enterica serovar Inverness str. ATCC 10720 plasmid pATCC10720, complete sequence) position: , mismatch: 7, identity: 0.767

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
gggattcatgtttttcccctgaaaatacgc	Protospacer
. .************  *********  **

215. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019193 (Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 plasmid pATCC10717, complete sequence) position: , mismatch: 7, identity: 0.767

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
gggattcatgtttttcccctgaaaatacgc	Protospacer
. .************  *********  **

216. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to CP053403 (Salmonella enterica strain 2010K-2057 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
gggattcatgtttttcccctgaaaatacgc	Protospacer
. .************  *********  **

217. spacer 2.25|1486115|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024166 (Salmonella enterica subsp. enterica serovar Gaminara strain CFSAN070644 plasmid pCFSAN024441_01, complete sequence) position: , mismatch: 7, identity: 0.767

acaattcatgtttttaacctgaaaatcagc	CRISPR spacer
gggattcatgtttttcccctgaaaatacgc	Protospacer
. .************  *********  **

218. spacer 2.28|1486313|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to DQ079872 (Coliphage NC35, complete genome) position: , mismatch: 7, identity: 0.767

agtgtatttagtcggatccgtgctagcagt	CRISPR spacer
atcgatattagtcggctgcgtgctagcagt	Protospacer
* .*   ******** * ************

219. spacer 2.29|1486379|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to AY682195 (Lactobacillus plantarum bacteriophage LP65, complete genome) position: , mismatch: 7, identity: 0.767

gtaaaagataccttttgagtaactgtttca	CRISPR spacer
acagtagctaccttttcagtaactgtttct	Protospacer
..*. ** ******** ************

220. spacer 2.29|1486379|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NC_006565 (Lactobacillus phage LP65, complete genome) position: , mismatch: 7, identity: 0.767

gtaaaagataccttttgagtaactgtttca	CRISPR spacer
acagtagctaccttttcagtaactgtttct	Protospacer
..*. ** ******** ************

221. spacer 1.4|1477459|29|NC_017576|CRISPRCasFinder matches to NC_021529 (Vibrio phage nt-1, complete genome) position: , mismatch: 8, identity: 0.724

acaaactatagtttaacagctaaggaagt	CRISPR spacer
gcaaactttagtttaacagctatcacttt	Protospacer
.****** **************  .   *

222. spacer 1.6|1477591|29|NC_017576|CRISPRCasFinder matches to NZ_CP019641 (Planococcus sp. Y42 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.724

tgacaattgaaaacgcaaacgagcaaata	CRISPR spacer
ccgaaagtgaaaacgaaaacgagcaaaac	Protospacer
. . ** ******** ***********

223. spacer 1.14|1477459|30|NC_017576|CRT,PILER-CR matches to NC_031070 (Bacillus phage Nemo, complete genome) position: , mismatch: 8, identity: 0.733

acaaactatagtttaacagctaaggaagtt	CRISPR spacer
acacactctagtttaacagctaaccctgcg	Protospacer
*** *** ***************    *.

224. spacer 1.14|1477459|30|NC_017576|CRT,PILER-CR matches to MF288919 (Bacillus phage AaronPhadgers, complete genome) position: , mismatch: 8, identity: 0.733

acaaactatagtttaacagctaaggaagtt	CRISPR spacer
acacactctagtttaacagctaaccccgcg	Protospacer
*** *** ***************    *.

225. spacer 1.14|1477459|30|NC_017576|CRT,PILER-CR matches to NC_031024 (Bacillus phage Belinda, complete genome) position: , mismatch: 8, identity: 0.733

acaaactatagtttaacagctaaggaagtt	CRISPR spacer
acacactctagtttaacagctaaccccgcg	Protospacer
*** *** ***************    *.

226. spacer 1.14|1477459|30|NC_017576|CRT,PILER-CR matches to MH638311 (Bacillus phage OmnioDeoPrimus, complete genome) position: , mismatch: 8, identity: 0.733

acaaactatagtttaacagctaaggaagtt	CRISPR spacer
acacactctagtttaacagctaaccctgcg	Protospacer
*** *** ***************    *.

227. spacer 1.14|1477459|30|NC_017576|CRT,PILER-CR matches to MF288918 (Bacillus phage Bubs, complete genome) position: , mismatch: 8, identity: 0.733

acaaactatagtttaacagctaaggaagtt	CRISPR spacer
acacactctagtttaacagctaaccctgcg	Protospacer
*** *** ***************    *.

228. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to NZ_CP007649 (Lactobacillus salivarius strain JCM1046 plasmid pLMP1046, complete sequence) position: , mismatch: 8, identity: 0.733

ttaacagttagtttattattaacaatatta	CRISPR spacer
ttaacaggtagtttattattaatggttaat	Protospacer
******* **************...*

229. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to NZ_CP015323 (Bacillus filamentosus strain Hbe603 plasmid pBEH1, complete sequence) position: , mismatch: 8, identity: 0.733

ttaacagttagtttattattaacaatatta	CRISPR spacer
gggttatttcgtttattattaacaatattt	Protospacer
  . .* ** *******************

230. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to MT074456 (Salmonella phage polluks, complete genome) position: , mismatch: 8, identity: 0.733

ttaacagttagtttattattaacaatatta	CRISPR spacer
ttaacagttaatttattattacccgcttat	Protospacer
**********.********** * .. *

231. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to NZ_CP037437 (Lactobacillus plantarum strain EM plasmid pEM8, complete sequence) position: , mismatch: 8, identity: 0.733

ttaacagttagtttattattaacaatatta	CRISPR spacer
tggacatttagttttttattaacaatgacg	Protospacer
* .*** ******* ***********. ..

232. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to LR217706 (Candidatus Erwinia sp. (ex Cinara spp.) strain ErCisplendens/pseudotsugae genome assembly, plasmid: pBioThi) position: , mismatch: 8, identity: 0.733

ttaacagttagtttattattaacaatatta	CRISPR spacer
gatattattaatttattattaataatatta	Protospacer
   *. .***.***********.*******

233. spacer 2.3|1484664|30|NC_017576|CRISPRCasFinder,CRT matches to MN940411 (Staphylococcus phage f2b1, partial genome) position: , mismatch: 8, identity: 0.733

tgaccagcagttagtttatcctgttttgtg	CRISPR spacer
agatcagcagttagtttaccctgtaccaag	Protospacer
 **.**************.***** ... *

234. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MK448739 (Streptococcus phage Javan363, complete genome) position: , mismatch: 8, identity: 0.733

gtaagtttatcccatactctaaattttggt	CRISPR spacer
cgcgctttatcccacgctctaaattttgga	Protospacer
   . *********..*************

235. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MK448901 (Streptococcus phage Javan306, complete genome) position: , mismatch: 8, identity: 0.733

gtaagtttatcccatactctaaattttggt	CRISPR spacer
cgcgttctatcccacgctctaaattttggt	Protospacer
   . *.*******..**************

236. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to GQ478085 (Enterococcus phage phiFL2B, complete genome) position: , mismatch: 8, identity: 0.733

gtaagtttatcccatactctaaattttggt	CRISPR spacer
tctcgcttatcccacgctctaaattttgga	Protospacer
 .  *.********..*************

237. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MF417967 (Uncultured Caudovirales phage clone 3S_16, partial genome) position: , mismatch: 8, identity: 0.733

gtaagtttatcccatactctaaattttggt	CRISPR spacer
ttcgtggtatcccacgctctaaattttggt	Protospacer
 * .   *******..**************

238. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to MK448830 (Streptococcus phage Javan73, complete genome) position: , mismatch: 8, identity: 0.733

gtaagtttatcccatactctaaattttggt	CRISPR spacer
ttttctttgtcccatgctctaaattttgta	Protospacer
 *   ***.******.************

239. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to KY065463 (Streptococcus phage IPP22, complete genome) position: , mismatch: 8, identity: 0.733

gtaagtttatcccatactctaaattttggt	CRISPR spacer
cgcgctctatcccacactctaaatttcggt	Protospacer
   . *.*******.***********.***

240. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to NC_013643 (Enterococcus phage phiFL2A, complete genome) position: , mismatch: 8, identity: 0.733

gtaagtttatcccatactctaaattttggt	CRISPR spacer
tctcgcttatcccacgctctaaattttgga	Protospacer
 .  *.********..*************

241. spacer 2.7|1484928|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to CP015514 (Vibrio vulnificus strain FORC_036 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

ttattttttatgtcgctgtcaatgttagct	CRISPR spacer
acattttttatgtggctctcaatgttttac	Protospacer
 .*********** *** ********   .

242. spacer 2.8|1484994|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035513 (Haematobacter massiliensis strain OT1 plasmid pOT1-3, complete sequence) position: , mismatch: 8, identity: 0.733

agatgaagatttccctttaccaccacttaa	CRISPR spacer
tgatggggatttccctttaccaccatgcgc	Protospacer
 ****..******************. ..

243. spacer 2.10|1485126|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MN694003 (Marine virus AFVG_250M677, complete genome) position: , mismatch: 8, identity: 0.733

ttgaactcaaacagacatttgaagaatggt	CRISPR spacer
atgaactcaaacagagatttgaaaatgaac	Protospacer
 ************** *******.*  ...

244. spacer 2.10|1485126|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MT133560 (Pseudomonas phage fnug, complete genome) position: , mismatch: 8, identity: 0.733

ttgaactcaaacagacatttgaagaatggt	CRISPR spacer
atgaactcaaacagacttttgatcagatga	Protospacer
 *************** *****  *.  *

245. spacer 2.10|1485126|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MN871489 (UNVERIFIED: Pseudomonas phage PaZh_1, complete genome) position: , mismatch: 8, identity: 0.733

ttgaactcaaacagacatttgaagaatggt	CRISPR spacer
atgaactcaaacagacttttgatcagatga	Protospacer
 *************** *****  *.  *

246. spacer 2.11|1485192|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MN694003 (Marine virus AFVG_250M677, complete genome) position: , mismatch: 8, identity: 0.733

ttgaactcaaacagacatttgaagaatggt	CRISPR spacer
atgaactcaaacagagatttgaaaatgaac	Protospacer
 ************** *******.*  ...

247. spacer 2.11|1485192|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MT133560 (Pseudomonas phage fnug, complete genome) position: , mismatch: 8, identity: 0.733

ttgaactcaaacagacatttgaagaatggt	CRISPR spacer
atgaactcaaacagacttttgatcagatga	Protospacer
 *************** *****  *.  *

248. spacer 2.11|1485192|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MN871489 (UNVERIFIED: Pseudomonas phage PaZh_1, complete genome) position: , mismatch: 8, identity: 0.733

ttgaactcaaacagacatttgaagaatggt	CRISPR spacer
atgaactcaaacagacttttgatcagatga	Protospacer
 *************** *****  *.  *

249. spacer 2.12|1485258|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MN694003 (Marine virus AFVG_250M677, complete genome) position: , mismatch: 8, identity: 0.733

ttgaactcaaacagacatttgaagaatggt	CRISPR spacer
atgaactcaaacagagatttgaaaatgaac	Protospacer
 ************** *******.*  ...

250. spacer 2.12|1485258|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MT133560 (Pseudomonas phage fnug, complete genome) position: , mismatch: 8, identity: 0.733

ttgaactcaaacagacatttgaagaatggt	CRISPR spacer
atgaactcaaacagacttttgatcagatga	Protospacer
 *************** *****  *.  *

251. spacer 2.12|1485258|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MN871489 (UNVERIFIED: Pseudomonas phage PaZh_1, complete genome) position: , mismatch: 8, identity: 0.733

ttgaactcaaacagacatttgaagaatggt	CRISPR spacer
atgaactcaaacagacttttgatcagatga	Protospacer
 *************** *****  *.  *

252. spacer 2.16|1485521|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013227 (Staphylococcus aureus strain UTSW MRSA 55 plasmid UTSW55_1, complete sequence) position: , mismatch: 8, identity: 0.733

gcgttttaagctcttgcatataatcttctg	CRISPR spacer
cacctttaacatcttgcatataatcttcaa	Protospacer
   .*****  ***************** .

253. spacer 2.20|1485785|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012421 (Rickettsia amblyommatis strain Ac37 plasmid pRAMAC18, complete sequence) position: , mismatch: 8, identity: 0.733

tagtcagtagctccttttttgttattattt	CRISPR spacer
tttacagaatctccttttttgttattagaa	Protospacer
*   *** * *****************

254. spacer 2.20|1485785|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NC_017029 (Rickettsia amblyommatis str. GAT-30V plasmid pMCE_2, complete sequence) position: , mismatch: 8, identity: 0.733

tagtcagtagctccttttttgttattattt	CRISPR spacer
tttacagaatctccttttttgttattagaa	Protospacer
*   *** * *****************

255. spacer 2.20|1485785|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NC_013938 (Candidatus Rickettsia amblyommii AaR/SC plasmid pRAM18, complete sequence) position: , mismatch: 8, identity: 0.733

tagtcagtagctccttttttgttattattt	CRISPR spacer
tttacagaatctccttttttgttattagaa	Protospacer
*   *** * *****************

256. spacer 2.20|1485785|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015014 (Rickettsia amblyommatis isolate An13 plasmid unnamed_3, complete sequence) position: , mismatch: 8, identity: 0.733

tagtcagtagctccttttttgttattattt	CRISPR spacer
tttacagaatctccttttttgttattagaa	Protospacer
*   *** * *****************

257. spacer 2.21|1485851|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041396 (Bacteroides ovatus strain 3725 D1 iv plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aaattaattttcacagtaaaaacctacagc	CRISPR spacer
aaataaattttcacagtaaaatcaaatgag	Protospacer
**** **************** *  *...

258. spacer 2.22|1485917|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MF288922 (Bacillus phage Janet, complete genome) position: , mismatch: 8, identity: 0.733

gccgctttctgaacttcgacacgtacagct	CRISPR spacer
tactctttctgaacttctacacgtagatta	Protospacer
  * ************* ******* * .

259. spacer 2.22|1485917|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NC_024216 (Bacillus phage CAM003, complete genome) position: , mismatch: 8, identity: 0.733

gccgctttctgaacttcgacacgtacagct	CRISPR spacer
tactctttctgaacttccacacgtagatta	Protospacer
  * ************* ******* * .

260. spacer 2.22|1485917|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to KJ489400 (Bacillus phage Hoody T, complete genome) position: , mismatch: 8, identity: 0.733

gccgctttctgaacttcgacacgtacagct	CRISPR spacer
tactctttctgaacttccacacgtagatta	Protospacer
  * ************* ******* * .

261. spacer 2.22|1485917|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NC_024207 (Bacillus phage Evoli, complete genome) position: , mismatch: 8, identity: 0.733

gccgctttctgaacttcgacacgtacagct	CRISPR spacer
tactctttctgaacttccacacgtagatta	Protospacer
  * ************* ******* * .

262. spacer 2.22|1485917|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MF498901 (Bacillus phage Anthony, complete genome) position: , mismatch: 8, identity: 0.733

gccgctttctgaacttcgacacgtacagct	CRISPR spacer
tactctttctgaacttccacacgtagatta	Protospacer
  * ************* ******* * .

263. spacer 2.28|1486313|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NC_023559 (Oenococcus phage phi9805, complete genome) position: , mismatch: 8, identity: 0.733

agtgtatttagtcggatccgtgctagcagt	CRISPR spacer
aacatatttagccggatccgtgctatcgac	Protospacer
*...*******.************* *...

264. spacer 1.14|1477459|30|NC_017576|CRT,PILER-CR matches to NC_021529 (Vibrio phage nt-1, complete genome) position: , mismatch: 9, identity: 0.7

acaaactatagtttaacagctaaggaagtt	CRISPR spacer
gcaaactttagtttaacagctatcactttg	Protospacer
.****** **************  .   *

265. spacer 1.16|1477591|30|NC_017576|CRT matches to NZ_CP019641 (Planococcus sp. Y42 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

tgacaattgaaaacgcaaacgagcaaatat	CRISPR spacer
ccgaaagtgaaaacgaaaacgagcaaaacc	Protospacer
. . ** ******** ***********  .

266. spacer 2.1|1484532|30|NC_017576|CRISPRCasFinder,CRT matches to MT497067 (Flavobacterium phage vB_Fsp_elemo14-1A, partial genome) position: , mismatch: 9, identity: 0.7

ttaacagttagtttattattaacaatatta	CRISPR spacer
agtgttgttactttattattaataatattt	Protospacer
   .. **** ***********.******

267. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to KP735928 (Staphylococcus phage IME-SA4, complete genome) position: , mismatch: 9, identity: 0.7

gtaagtttatcccatactctaaattttggt	CRISPR spacer
aactctttatcccatgctctaaattttaag	Protospacer
.    **********.***********..

268. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to KY779848 (Staphylococcus phage qdsa001, complete genome) position: , mismatch: 9, identity: 0.7

gtaagtttatcccatactctaaattttggt	CRISPR spacer
gattctttatcccatgctctaaatttaatc	Protospacer
*    **********.********** . .

269. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to KY653129 (Staphylococcus phage IME1365_01, complete genome) position: , mismatch: 9, identity: 0.7

gtaagtttatcccatactctaaattttggt	CRISPR spacer
tcttctttatcccacactctaaatttaaat	Protospacer
 .   *********.*********** ..*

270. spacer 2.5|1484796|30|NC_017576|CRISPRCasFinder,CRT matches to JN192400 (Staphylococcus phage vB_SepiS-phiIPLA5, complete genome) position: , mismatch: 10, identity: 0.667

gtaagtttatcccatactctaaattttggt	CRISPR spacer
tcgtctttatcccatgctctaaatttcata	Protospacer
 ..  **********.**********..

271. spacer 2.7|1484928|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MK448969 (Streptococcus phage Javan514, complete genome) position: , mismatch: 10, identity: 0.667

ttattttttatgtcgctgtcaatgttagct	CRISPR spacer
aagaagtttatggcgctgtcaatgttactg	Protospacer
  .   ****** ************** .

272. spacer 2.7|1484928|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 10, identity: 0.667

ttattttttatgtcgctgtcaatgttagct	CRISPR spacer
aagaagtttatggcgctgtcaatgttactg	Protospacer
  .   ****** ************** .

273. spacer 2.7|1484928|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 10, identity: 0.667

ttattttttatgtcgctgtcaatgttagct	CRISPR spacer
aagaagtttatggcgctgtcaatgttactg	Protospacer
  .   ****** ************** .

274. spacer 2.7|1484928|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 10, identity: 0.667

ttattttttatgtcgctgtcaatgttagct	CRISPR spacer
aagaagtttatggcgctgtcaatgttactg	Protospacer
  .   ****** ************** .

275. spacer 2.26|1486181|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045608 (Bacillus cereus strain SB1 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.667

aggtgaggttgataatattgaaacaatcaa	CRISPR spacer
ctcatcatttgaaaatattgaaacaatcag	Protospacer
      . **** ****************.

276. spacer 2.26|1486181|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 10, identity: 0.667

aggtgaggttgataatattgaaacaatcaa	CRISPR spacer
ctcatcatttgaaaatattgaaacaatcag	Protospacer
      . **** ****************.

277. spacer 2.26|1486181|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.667

aggtgaggttgataatattgaaacaatcaa	CRISPR spacer
ctcatcatttgaaaatattgaaacaatcag	Protospacer
      . **** ****************.

278. spacer 2.26|1486181|30|NC_017576|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 10, identity: 0.667

aggtgaggttgataatattgaaacaatcaa	CRISPR spacer
ctcatcatttgaaaatattgaaacaatcag	Protospacer
      . **** ****************.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1328201 : 1340747

Bacillus_phage(33.33%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012962071.1\|1328201_1328612_-	peptide deformylase	A0A2I7QLT9	Vibrio_phage	3.4e-13	39.8
WP_012962072.1\|1328608_1329118_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012962073.1\|1329384_1330734_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_009854399.1\|1330980_1331478_+	DUF308 domain-containing protein	NA	NA	NA	NA
WP_012962074.1\|1331534_1332026_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.3e-46	62.3
WP_193379166.1\|1332038_1332755_-	7-carboxy-7-deazaguanine synthase QueE	E7DN68	Pneumococcus_phage	1.8e-62	47.1
WP_012962076.1\|1332744_1333191_-	6-carboxytetrahydropterin synthase QueD	J9PV91	Bacillus_phage	1.3e-42	57.7
WP_012962077.1\|1333190_1333844_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	1.2e-60	53.8
WP_012962078.1\|1334084_1335854_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.4e-57	30.1
WP_012962079.1\|1335856_1337596_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.6e-38	26.4
WP_012962080.1\|1337673_1339545_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	3.0e-64	31.8
WP_012962081.1\|1339541_1340747_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	1.2e-42	48.5

DBSCAN-SWA_2

1643549 : 1661072

Streptococcus_phage(100.0%)

integrase

attL 1641580:1641601|attR 1669978:1669999

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1641580:1641601	attL	NA	NA	NA	NA
WP_001291561.1\|1643549_1644767_-\|integrase	tyrosine-type recombinase/integrase	A0A1S5SEW7	Streptococcus_phage	3.7e-233	100.0
WP_000814511.1\|1644848_1645052_-	excisionase	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
WP_000857133.1\|1645512_1645743_-	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	2.7e-36	100.0
WP_000804885.1\|1645739_1646162_-	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	2.5e-72	100.0
WP_001227347.1\|1646666_1647020_+	helix-turn-helix domain-containing protein	A0A1S5SFA6	Streptococcus_phage	1.3e-58	100.0
WP_000336323.1\|1647079_1647247_-	cysteine-rich KTR domain-containing protein	D0R0F6	Streptococcus_phage	1.6e-14	68.0
WP_000691749.1\|1647365_1649285_-	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	99.4
WP_001814923.1\|1649300_1649417_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA
WP_001224318.1\|1649661_1650594_-	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	3.1e-171	99.4
WP_000769868.1\|1650590_1651592_-	lysozyme family protein	A0A1S5SEZ8	Streptococcus_phage	5.0e-191	100.0
WP_000804748.1\|1651588_1653766_-	membrane protein	A0A1S5SF30	Streptococcus_phage	0.0e+00	100.0
WP_000331160.1\|1653768_1656216_-	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	100.0
WP_000506270.1\|1656199_1656706_-	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	8.6e-91	100.0
WP_000342539.1\|1656680_1657178_-	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
WP_001009056.1\|1657294_1657516_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
WP_000398284.1\|1657558_1658764_-	replication initiation factor domain-containing protein	A0A1S5SEX3	Streptococcus_phage	2.8e-233	100.0
WP_000879507.1\|1658786_1658939_-	hypothetical protein	NA	NA	NA	NA
WP_000813488.1\|1658941_1660327_-	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	1.1e-265	100.0
WP_000985015.1\|1660355_1660742_-	YdcP family protein	A0A1S5SF96	Streptococcus_phage	3.0e-64	100.0
WP_000420682.1\|1660757_1661072_-	YdcP family protein	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0
1669978:1669999	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1782902 : 1798799

Streptococcus_phage(76.92%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012962367.1\|1782902_1783739_-	aldo/keto reductase	A0A1V0SDE7	Indivirus	4.5e-28	32.3
WP_013643326.1\|1783751_1784573_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_012962369.1\|1784677_1785550_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_009854745.1\|1785686_1786043_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	8.0e-35	59.1
WP_009854746.1\|1786055_1786541_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.1e-42	52.8
WP_012962370.1\|1786599_1786827_-	hypothetical protein	NA	NA	NA	NA
WP_012962371.1\|1786927_1788106_-	3-phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	2.3e-179	80.9
WP_003065991.1\|1788151_1788700_-	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	8.8e-57	57.9
WP_014620233.1\|1788770_1789862_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	2.1e-174	82.0
WP_014620234.1\|1789997_1790636_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_003066000.1\|1790767_1791109_-	P-II family nitrogen regulator	NA	NA	NA	NA
WP_012962373.1\|1791165_1792401_-	ammonium transporter	NA	NA	NA	NA
WP_009854752.1\|1792800_1793667_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	8.5e-115	72.2
WP_003066006.1\|1793673_1793994_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	1.5e-29	61.3
WP_009854753.1\|1793986_1794787_-	signal peptidase II	NA	NA	NA	NA
WP_012962374.1\|1794783_1795659_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	8.7e-75	50.7
WP_012962375.1\|1795669_1796305_-	dTMP kinase	M1PSC7	Streptococcus_phage	2.8e-70	66.2
WP_012962376.1\|1796491_1797151_-	CBS domain-containing protein	M1NSC5	Streptococcus_phage	2.5e-74	65.1
WP_012962377.1\|1797324_1798035_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-16	27.0
WP_012962378.1\|1798034_1798799_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.2e-17	25.2

DBSCAN-SWA_4

2018282 : 2060374

Moraxella_phage(20.0%)

tRNA,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012962502.1\|2018282_2019293_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.2e-61	41.0
WP_009854971.1\|2019302_2019743_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA
WP_012962504.1\|2019726_2020416_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_009854973.1\|2020596_2020827_+	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA
WP_009854974.1\|2020828_2022511_+	ribonuclease J	NA	NA	NA	NA
WP_043910886.1\|2022776_2023400_-	CHAP domain-containing protein	NA	NA	NA	NA
WP_012962506.1\|2023587_2025027_-	glutamate synthase subunit beta	NA	NA	NA	NA
WP_012962507.1\|2025028_2029546_-	glutamate synthase large subunit	NA	NA	NA	NA
WP_009854979.1\|2029723_2031070_-	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_009854980.1\|2031119_2031491_-	MerR family transcriptional regulator	Q9EYF2	Enterobacteria_phage	4.0e-05	35.8
WP_009854981.1\|2031579_2032116_-	aromatic acid exporter family protein	NA	NA	NA	NA
WP_009854982.1\|2032344_2033541_-	phosphoglycerate kinase	NA	NA	NA	NA
WP_004233286.1\|2033728_2034742_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_009854983.1\|2034946_2037025_-	elongation factor G	E4ZFJ7	Streptococcus_phage	9.7e-64	29.1
WP_003066535.1\|2037225_2037696_-	30S ribosomal protein S7	NA	NA	NA	NA
WP_009854984.1\|2037716_2038130_-	30S ribosomal protein S12	NA	NA	NA	NA
WP_012962508.1\|2038421_2039234_-	pur operon repressor	NA	NA	NA	NA
WP_009854986.1\|2039380_2040319_-	3'-5' exoribonuclease YhaM family protein	NA	NA	NA	NA
WP_012962509.1\|2040308_2041583_-	DNA recombination protein RmuC	NA	NA	NA	NA
WP_009854988.1\|2041584_2042214_-	thiamine diphosphokinase	NA	NA	NA	NA
WP_009854989.1\|2042206_2042869_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_009854990.1\|2042875_2043748_-	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
WP_009854991.1\|2045943_2046144_-	hypothetical protein	NA	NA	NA	NA
WP_012962511.1\|2046275_2047640_-	GHKL domain-containing protein	NA	NA	NA	NA
WP_012962512.1\|2047652_2048381_-	response regulator transcription factor	NA	NA	NA	NA
WP_009854994.1\|2048479_2048773_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_009854995.1\|2048823_2049051_-	hypothetical protein	NA	NA	NA	NA
WP_003066564.1\|2049320_2049632_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_009854997.1\|2049643_2049793_-	hypothetical protein	NA	NA	NA	NA
WP_009854998.1\|2049802_2050102_-	DUF3884 family protein	NA	NA	NA	NA
WP_009854999.1\|2050401_2050539_+	hypothetical protein	NA	NA	NA	NA
WP_012962514.1\|2050560_2051868_-	GHKL domain-containing protein	NA	NA	NA	NA
WP_009855001.1\|2051875_2052607_-	response regulator transcription factor	A0A1V0E029	Clostridioides_phage	1.5e-19	25.0
WP_009855002.1\|2052623_2052950_-	LytTR family transcriptional regulator	NA	NA	NA	NA
WP_009855003.1\|2053150_2053351_-	hypothetical protein	NA	NA	NA	NA
WP_009855005.1\|2053671_2054685_-\|bacteriocin	bacteriocin biosynthesis protein	NA	NA	NA	NA
WP_009855009.1\|2055742_2055940_-\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_009855010.1\|2055958_2056210_-\|bacteriocin	Blp family class II bacteriocin	NA	NA	NA	NA
WP_009855011.1\|2056456_2056714_+	hypothetical protein	NA	NA	NA	NA
WP_013643495.1\|2056820_2058968_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	1.6e-45	28.6
WP_013643496.1\|2058979_2060374_+\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA

DBSCAN-SWA_5

2181839 : 2191197

Streptococcus_phage(87.5%)

integrase

attL 2185292:2185307|attR 2191246:2191261

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012962601.1\|2181839_2183468_-	DNA primase	A0A1X9I717	Streptococcus_phage	1.1e-200	67.7
WP_012962602.1\|2183442_2183991_-	hypothetical protein	NA	NA	NA	NA
WP_012962603.1\|2184125_2184290_-	hypothetical protein	NA	NA	NA	NA
WP_012962604.1\|2184286_2184559_-	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	1.9e-20	54.7
WP_013643540.1\|2184561_2184903_-	hypothetical protein	NA	NA	NA	NA
WP_012962606.1\|2184914_2185109_-	hypothetical protein	NA	NA	NA	NA
WP_012962607.1\|2185112_2185343_-	hypothetical protein	NA	NA	NA	NA
2185292:2185307	attL	NA	NA	NA	NA
WP_012962608.1\|2185704_2185926_-	helix-turn-helix transcriptional regulator	X2KUC2	Streptococcus_phage	3.2e-10	48.5
WP_012962609.1\|2186073_2186466_+	helix-turn-helix transcriptional regulator	A0A1S5S7K7	Streptococcus_phage	1.5e-18	50.5
WP_013643541.1\|2186466_2186835_+	hypothetical protein	A0A2H4IZZ1	uncultured_Caudovirales_phage	5.4e-18	43.3
WP_012962611.1\|2187029_2187266_+	hypothetical protein	NA	NA	NA	NA
WP_012962612.1\|2187770_2188937_+\|integrase	site-specific integrase	A0A1X9I6A9	Streptococcus_phage	1.1e-144	66.4
WP_009855124.1\|2189062_2189890_+	hypothetical protein	M1PFV6	Streptococcus_phage	8.6e-32	61.7
WP_009855125.1\|2189919_2191197_+	toxic anion resistance protein	M1PLC8	Streptococcus_phage	3.5e-149	70.8
2191246:2191261	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2339304 : 2347441

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009855203.1\|2339304_2339958_-	transglycosylase SLT domain-containing protein	Q4Z8Z7	Staphylococcus_phage	6.4e-22	76.8
WP_009855204.1\|2340164_2340755_-	LysM peptidoglycan-binding domain-containing protein	A0A0E3XCL7	Enterococcus_phage	1.1e-20	76.9
WP_012962644.1\|2340887_2341685_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_009855206.1\|2341677_2342520_-	energy-coupling factor transporter ATPase	A0A2H4PQG7	Staphylococcus_phage	8.8e-16	28.5
WP_009855207.1\|2342495_2343338_-	energy-coupling factor transporter ATPase	W8CYL7	Bacillus_phage	1.3e-14	30.3
WP_009855208.1\|2343334_2343889_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_009855209.1\|2343898_2344843_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_009855210.1\|2344906_2346196_-	insulinase family protein	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	1.2e-19	31.2
WP_009855211.1\|2346196_2347441_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	7.2e-91	42.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_017576

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection