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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010978 Pelosinus fermentans JBW45 chromosome, complete genome 1 crisprs RT,cas3,csa3,DEDDh,cas4,DinG,WYL 0 1 5 0

Results visualization

1. NZ_CP010978
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010978_1 4067613-4067722 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP010978_1 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder 4067651-4067684 34 MH791411 UNVERIFIED: Escherichia phage Ecwhy_1, complete genome 201562-201595 7 0.794
NZ_CP010978_1 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder 4067651-4067684 34 MT446416 UNVERIFIED: Escherichia virus TH47, complete genome 348333-348366 7 0.794
NZ_CP010978_1 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder 4067651-4067684 34 MH494197 Escherichia phage CMSTMSU, complete genome 26615-26648 7 0.794
NZ_CP010978_1 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder 4067651-4067684 34 MH494197 Escherichia phage CMSTMSU, complete genome 381622-381655 7 0.794
NZ_CP010978_1 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder 4067651-4067684 34 MK327937 Escherichia phage vB_EcoM_G10400, complete genome 31053-31086 8 0.765
NZ_CP010978_1 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder 4067651-4067684 34 MT884006 Escherichia phage vb_EcoM_bov9_1, complete genome 30847-30880 8 0.765
NZ_CP010978_1 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder 4067651-4067684 34 MT884007 Escherichia phage vb_EcoM_bov10K1, complete genome 30847-30880 8 0.765
NZ_CP010978_1 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder 4067651-4067684 34 MF001359 Escherichia phage EC121, partial genome 30778-30811 8 0.765
NZ_CP010978_1 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder 4067651-4067684 34 LC465543 Shigella phage SfPhi01 DNA, complete sequence 51384-51417 8 0.765
NZ_CP010978_1 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder 4067651-4067684 34 KT184311 Enterobacteria phage GiZh, complete genome 81163-81196 8 0.765
NZ_CP010978_1 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder 4067651-4067684 34 NC_031085 Shigella phage SHBML-50-1, complete genome 32417-32450 8 0.765
NZ_CP010978_1 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder 4067651-4067684 34 MH791414 UNVERIFIED: Aeromonas phage Aswh_1, complete genome 189729-189762 9 0.735

1. spacer 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder matches to MH791411 (UNVERIFIED: Escherichia phage Ecwhy_1, complete genome) position: , mismatch: 7, identity: 0.794

ctttgaattcttcttcatgttcaatcctctctac	CRISPR spacer
ctttgaattcttcttcaagttccatgatcatttc	Protospacer
***************** **** **  ** .* *

2. spacer 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder matches to MT446416 (UNVERIFIED: Escherichia virus TH47, complete genome) position: , mismatch: 7, identity: 0.794

ctttgaattcttcttcatgttcaatcctctctac	CRISPR spacer
ctttgaattcttcttcaagttccatgatcatttc	Protospacer
***************** **** **  ** .* *

3. spacer 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder matches to MH494197 (Escherichia phage CMSTMSU, complete genome) position: , mismatch: 7, identity: 0.794

ctttgaattcttcttcatgttcaatcctctctac	CRISPR spacer
ctttgaattcttcttcaagttccatgatcatttc	Protospacer
***************** **** **  ** .* *

4. spacer 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder matches to MH494197 (Escherichia phage CMSTMSU, complete genome) position: , mismatch: 7, identity: 0.794

ctttgaattcttcttcatgttcaatcctctctac	CRISPR spacer
ctttgaattcttcttcaagttccatgatcatttc	Protospacer
***************** **** **  ** .* *

5. spacer 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder matches to MK327937 (Escherichia phage vB_EcoM_G10400, complete genome) position: , mismatch: 8, identity: 0.765

ctttgaattcttcttcatgttcaatcctctctac	CRISPR spacer
attttaattcatcttcatgttcaatccaagttcc	Protospacer
 *** ***** ****************   .* *

6. spacer 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder matches to MT884006 (Escherichia phage vb_EcoM_bov9_1, complete genome) position: , mismatch: 8, identity: 0.765

ctttgaattcttcttcatgttcaatcctctctac	CRISPR spacer
attttaattcatcttcatgttcaatccaagttcc	Protospacer
 *** ***** ****************   .* *

7. spacer 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder matches to MT884007 (Escherichia phage vb_EcoM_bov10K1, complete genome) position: , mismatch: 8, identity: 0.765

ctttgaattcttcttcatgttcaatcctctctac	CRISPR spacer
attttaattcatcttcatgttcaatccaagttcc	Protospacer
 *** ***** ****************   .* *

8. spacer 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder matches to MF001359 (Escherichia phage EC121, partial genome) position: , mismatch: 8, identity: 0.765

ctttgaattcttcttcatgttcaatcctctctac	CRISPR spacer
attttaattcatcttcatgttcaatccaagttcc	Protospacer
 *** ***** ****************   .* *

9. spacer 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder matches to LC465543 (Shigella phage SfPhi01 DNA, complete sequence) position: , mismatch: 8, identity: 0.765

ctttgaattcttcttcatgttcaatcctctctac	CRISPR spacer
attttaattcatcttcatgttcaatccaagttcc	Protospacer
 *** ***** ****************   .* *

10. spacer 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder matches to KT184311 (Enterobacteria phage GiZh, complete genome) position: , mismatch: 8, identity: 0.765

ctttgaattcttcttcatgttcaatcctctctac	CRISPR spacer
attttaattcatcttcatgttcaatccaagttcc	Protospacer
 *** ***** ****************   .* *

11. spacer 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder matches to NC_031085 (Shigella phage SHBML-50-1, complete genome) position: , mismatch: 8, identity: 0.765

ctttgaattcttcttcatgttcaatcctctctac	CRISPR spacer
attttaattcatcttcatgttcaatccaagttcc	Protospacer
 *** ***** ****************   .* *

12. spacer 1.1|4067651|34|NZ_CP010978|CRISPRCasFinder matches to MH791414 (UNVERIFIED: Aeromonas phage Aswh_1, complete genome) position: , mismatch: 9, identity: 0.735

ctttgaattcttcttcatgttcaatcctctctac	CRISPR spacer
agtcaaattctttttcatggtcaatcctctatct	Protospacer
  *..*******.****** ********** * .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 843304 : 850410 6 Escherichia_phage(33.33%) NA NA
DBSCAN-SWA_2 1819877 : 1840225 25 Brevibacillus_phage(15.38%) NA NA
DBSCAN-SWA_3 3314085 : 3324082 10 Synechococcus_phage(30.0%) NA NA
DBSCAN-SWA_4 4113136 : 4122822 13 Vibrio_phage(54.55%) tail,plate NA
DBSCAN-SWA_5 4472330 : 4540208 60 Streptococcus_phage(33.33%) transposase,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage