CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP015923	Salmonella enterica subsp. enterica serovar Newport str. Levine 1 chromosome, complete genome	3 crisprs	PD-DExK,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,cas14j,RT	0	19	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015923_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015923_1

588643-588743

Orphan

Consensus_repeat	Method
GCTTCAGTGGCGAACGTCGTGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015923_1

>merge|NZ_CP015923|1|588643-588743|CRISPRCasFinder
GCTTCAGTGGCGAACGTCGTGAAGGCGGTCGTAATTTCAGCGGCGAACGTCGTGAAGGCGGTCGTGGTGATGGTCGTCGCTTCAGCGGCGAACGTCGTGAA

>NZ_CP015923|1|1|588643-588743|CRISPRCasFinder
GCTTCAGTGGCGAACGTCGTGAA	GGCGGTCGTAATTTCAGCGGCGAACGTCGTGAAGGCGGTCGTGGTGATGGTCGTC
GCTTCAGCGGCGAACGTCGTGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015923.1\|WP_000089674.1\|581999_582944_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235333
NZ_CP015923.1\|WP_010723222.1\|586840_586921_+\|protein-YrbN	unknown	unknown	gnl\|CDD\|380282
NZ_CP015923.1\|WP_000928379.1\|594583_594901_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|178979
NZ_CP015923.1\|WP_001031038.1\|577172_578675_+\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|236410
NZ_CP015923.1\|WP_000802069.1\|585850_586735_+\|lipoprotein-NlpI	unknown	unknown	gnl\|CDD\|236875
NZ_CP015923.1\|WP_000884721.1\|593575_594100_+\|SCP2-domain-containing-protein	unknown	unknown	gnl\|CDD\|225696
NZ_CP015923.1\|WP_000133064.1\|578699_581378_+\|translation-initiation-factor-IF-2	unknown	unknown	gnl\|CDD\|235401
NZ_CP015923.1\|WP_000130411.1\|590291_591299_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182505
NZ_CP015923.1\|WP_001670767.1\|583605_585741_+\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NZ_CP015923.1\|WP_001532495.1\|596010_596646_+\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187560
NZ_CP015923.1\|WP_000105461.1\|576692_577145_+\|ribosome-maturation-factor-RimP	unknown	unknown	gnl\|CDD\|234627
NZ_CP015923.1\|WP_000207657.1\|574721_576065_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235434
NZ_CP015923.1\|WP_014343907.1\|591476_592373_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|237968
NZ_CP015923.1\|WP_001040200.1\|581598_582000_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP015923.1\|WP_000224381.1\|588956_590201_+\|tryptophan-permease	unknown	unknown	gnl\|CDD\|182492
NZ_CP015923.1\|WP_000421309.1\|592363_593359_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP015923.1\|WP_000908562.1\|594093_594597_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695
NZ_CP015923.1\|WP_000037599.1\|595361_595880_-\|protein/nucleic-acid-deglycase	unknown	unknown	gnl\|CDD\|153228
NZ_CP015923.1\|WP_000059465.1\|583094_583364_+\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP015923.1\|WP_000380404.1\|594938_595382_+\|YhbP-family-protein	unknown	unknown	gnl\|CDD\|235127

Protein	Function_ID	Function_description	E-value
NZ_CP015923.1\|WP_000089674.1\|581999_582944_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235333	PRK05033, truB, tRNA pseudouridine synthase B; Provisional.	0
NZ_CP015923.1\|WP_010723222.1\|586840_586921_+\|protein-YrbN	gnl\|CDD\|380282	NF033440, small_YrbN, protein YrbN. YrbN, a small protein of only 26 amino acids, is found in at least these genera: Escherichia, Salmonella, Enterobacter, Klebsiella, and Yersinia. It is known to be expressed in E. coli.	1.66225e-08
NZ_CP015923.1\|WP_000928379.1\|594583_594901_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	4.3214e-44
NZ_CP015923.1\|WP_001031038.1\|577172_578675_+\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|236410	PRK09202, nusA, transcription elongation factor NusA; Validated.	0
NZ_CP015923.1\|WP_000802069.1\|585850_586735_+\|lipoprotein-NlpI	gnl\|CDD\|236875	PRK11189, PRK11189, lipoprotein NlpI; Provisional.	0
NZ_CP015923.1\|WP_000884721.1\|593575_594100_+\|SCP2-domain-containing-protein	gnl\|CDD\|225696	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism].	1.82299e-84
NZ_CP015923.1\|WP_000133064.1\|578699_581378_+\|translation-initiation-factor-IF-2	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0
NZ_CP015923.1\|WP_000130411.1\|590291_591299_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|182505	PRK10508, PRK10508, luciferase-like monooxygenase.	0
NZ_CP015923.1\|WP_001670767.1\|583605_585741_+\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NZ_CP015923.1\|WP_001532495.1\|596010_596646_+\|NAD(P)H-binding-protein	gnl\|CDD\|187560	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs. Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	5.29768e-69
NZ_CP015923.1\|WP_000105461.1\|576692_577145_+\|ribosome-maturation-factor-RimP	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	4.39218e-79
NZ_CP015923.1\|WP_000207657.1\|574721_576065_-\|argininosuccinate-synthase	gnl\|CDD\|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0
NZ_CP015923.1\|WP_014343907.1\|591476_592373_-\|U32-family-peptidase	gnl\|CDD\|237968	PRK15447, PRK15447, putative protease; Provisional.	0
NZ_CP015923.1\|WP_001040200.1\|581598_582000_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	9.5207e-53
NZ_CP015923.1\|WP_000224381.1\|588956_590201_+\|tryptophan-permease	gnl\|CDD\|182492	PRK10483, PRK10483, tryptophan permease; Provisional.	0
NZ_CP015923.1\|WP_000421309.1\|592363_593359_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	3.77757e-116
NZ_CP015923.1\|WP_000908562.1\|594093_594597_+\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	7.2703e-63
NZ_CP015923.1\|WP_000037599.1\|595361_595880_-\|protein/nucleic-acid-deglycase	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	5.12939e-86
NZ_CP015923.1\|WP_000059465.1\|583094_583364_+\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	7.70279e-54
NZ_CP015923.1\|WP_000380404.1\|594938_595382_+\|YhbP-family-protein	gnl\|CDD\|235127	PRK03467, PRK03467, hypothetical protein; Provisional.	1.36854e-99

>NZ_CP015923.1|WP_010723222.1|586840_586921_+|protein-YrbN
MKIADQFHDELCRLAAINFEAHVLHG
>NZ_CP015923.1|WP_000802069.1|585850_586735_+|lipoprotein-NlpI
MKPFLRWCFVATALTLAGCSNSAWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPYRSLWLYLVEQKLNEKQAKEALKARFEKSDKEQWGWNIVEFYLGDISEATLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDDLAESDQQ
>NZ_CP015923.1|WP_001670767.1|583605_585741_+|polyribonucleotide-nucleotidyltransferase
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQVVIQAINDLVKEAGKPRWDWQPEAVNDALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIEQLIAEDETLDANELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPASEQAE
>NZ_CP015923.1|WP_000059465.1|583094_583364_+|30S-ribosomal-protein-S15
MSLSTEATAKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTALIERLGLRR
>NZ_CP015923.1|WP_000089674.1|581999_582944_+|tRNA-pseudouridine(55)-synthase-TruB
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVTFSAEQLASALETFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYIRTIIDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEHLQTLVAQAEQQGVPAAQLLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTGAPLKGLVRVTEGEDDKFIGMGEIDDEGRVAPRRLVVEYPA
>NZ_CP015923.1|WP_001040200.1|581598_582000_+|30S-ribosome-binding-factor-RbfA
MAKEFGRPQRVAQEMQKEIAIILQREIKDPRLGMMTTVSGVEMSRDLAYAKVFVTFLNDQDEAAVKNGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTNVVKHDEERRVNPDDSKED
>NZ_CP015923.1|WP_000133064.1|578699_581378_+|translation-initiation-factor-IF-2
MTDVTLKALAAERQVSVDRLVQQFADAGIRKSADDSVSAQEKQTLLAHLNREAVSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARREAEEQAKREAQQKAEREAAEQAKREAAEKAKREAAEKDKVSNQQTDDMTKTAQAEKARRENEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTATPEPVEDTSDYHVTTSQHARQAEDENDREVEGGRGRGRNAKAARPAKKGKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIESESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRVGDMIEVFEIIEIQRTIA
>NZ_CP015923.1|WP_001031038.1|577172_578675_+|transcription-termination/antitermination-protein-NusA
MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVEIDRKSGDFDTFRRWLIVEEVTMPTKEITLEAARFEDESLNVGDYVEDQIESVTFDRITTQTAKQVIVQKVREAERAMVVDQFRDQEGEIVTGVVKKVNRDNISLEIKSEGMAGNAEAVILREDMLPRENFRPGDRIRGVLYAVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIEIFTKYLDIDEEFATVLVEEGFSTLEELAYVPMKELLEIDGLDEPTVEALRERAKNALATLAQDQEASLGDNKPADDLLNLEGLDRDMAFKLAARGVCTLEDLADQGIDDLADIEGLTDEKAGELIMAARNICWFGDEA
>NZ_CP015923.1|WP_000105461.1|576692_577145_+|ribosome-maturation-factor-RimP
MSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF
>NZ_CP015923.1|WP_000207657.1|574721_576065_-|argininosuccinate-synthase
MTTILKHLPAGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEFLNSSVKIVNPIMGVKFWDESVKIPAEVVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHSHGRQLGKLLYQGRWFDSQALMLRDGLQRWVASQITGEVTLELRRGNDYSILNTVSDNLTYKPERLTMEKGDSVFSPDDRIGQLTMRNLDITDTREKLFGYAKAGLLTASSATGLPQVENLENKGK
>NZ_CP015923.1|WP_000224381.1|588956_590201_+|tryptophan-permease
MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALVFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNIVNGISIAFVLYILTYAYISASGSILHHTFAEMSLNVPARAAGFAFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVTPTTLFNVAESHASYTPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPRTIVKCLIYGTLLALVLYSVWLLGTMGNIPRPEFIGIAQKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAMGRFKTALLTFLPPMIGGLLYPNGFLYAIGYAGLAATIWAAIVPALLARKSRERFGSPKFRVWGGKPMIVLILLFGVGNALVHILSSFNLLPVYQ
>NZ_CP015923.1|WP_000130411.1|590291_591299_-|LLM-class-flavin-dependent-oxidoreductase
MTDKTIPFSALDLAPIPEGASAKEAFTHSLDLARLAEKRGYHRYWLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQPTMRALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPGYGEQVPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRTQFKPSARLEKPYAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIENMETFWSPSEQYGVQQALSMSLVGDKAKVRHGLESILRETQADEIMVNGQIFDHQARLHSFDLAMDVKQELLG
>NZ_CP015923.1|WP_014343907.1|591476_592373_-|U32-family-peptidase
MAVRGAMKYSLGPVLYYWPKETLEDFYQQAAKSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAASGKQVVLSTLALVQASSELSELKRYVDNGDFLLEASDLGVVNLCAERKLPFVAGHALNCYNAVTLRRLLKEGMVRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRDVLSQENQQVFVLNGIQTMSGYVYNLGNELTSMQGLVDIVRLSPLGTETFAMLDAFRANENGGAPLPLAAHSDCNGYWKRLAGLELQA
>NZ_CP015923.1|WP_000421309.1|592363_593359_-|U32-family-peptidase
MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAIRFYHRNFDVHRVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNDVLIDRYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKAAPQNFVPQRDWMETLGAMSEGTQTTLGAYHRKWQ
>NZ_CP015923.1|WP_000884721.1|593575_594100_+|SCP2-domain-containing-protein
MLDKLRSRLVHAGPSLMSVPVKLTPFALKRQVLEQVLSWQFRQALADGELEFLEGRWLSIHVRDIDLKWYTTVENEKLIVSQQADADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRVMLLQLADFVEAGMKNSPETKQTSVGEPC
>NZ_CP015923.1|WP_000908562.1|594093_594597_+|N-acetyltransferase
MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVVGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRFGFELAAHYDLHCRWPGTESAFQVHRLAEDALEGVTGLVEYHDHFNRF
>NZ_CP015923.1|WP_000928379.1|594583_594901_-|GIY-YIG-nuclease-family-protein
MLMATMTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVGDRSLALRIEYRIKQLTKRQKERLVTEREAFEALLSSLQTPVLKND
>NZ_CP015923.1|WP_000380404.1|594938_595382_+|YhbP-family-protein
MDTLTAIGRWLAKQHVVTWCVHHEGELWCANAFYLFDAQNVALYLLTDDKTRHAQMSGACAPVAGTVNGQPKTVARIRGVQFKGEIRRLEGQESDAARKAYLRRFPVARVLPAPVWEIRLDEIKFTDNTLGFGKKLHWLRDSRAQQA
>NZ_CP015923.1|WP_000037599.1|595361_595880_-|protein/nucleic-acid-deglycase
MSKKIAVLITDEFEDSEFTSPAAEFRQAGHEVITIEKEAGKTVKGKKGEASVTIDKAIDDVRPDEFDALLLPGGHSPDYLRGDSRFVDFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLPAFNREALRLLGA
>NZ_CP015923.1|WP_001532495.1|596010_596646_+|NAD(P)H-binding-protein
MSQVLITGATGLVGGHLLRMLINTPQVSAIAAPTRRPLTDIVGVYNPHDPQLTDALAQVTDPVDIVFCCLGTTRREAGSKAAFIHADYTLVVDTALTGRRLGAQHMVVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPRLTIARPSMLLGDRTTRRVNETLFAPLFRLLPGNWKSIDARDVARAMLAEALAPAQEGVTILTSSQLREKAG

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Crispr_ID: NZ_CP015923_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015923_2

936038-937256

TypeI-E

I-E

Consensus_repeat	Method
TGTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGAAT	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR

19 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_CP015923_2

>merge|NZ_CP015923|2|936038-937256|PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR
TGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGCGTATTTCGATTGTCTGGACATTTCGTACGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAGAATATGATTTATATAGAACCAATGAACTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGCGTGTGTTGTTGAGGATCAGTCTGGAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGGCCATGTTCTTTTCCCTCTAAAAAATCCGGTGTTCCCCGCGCCAGCGGGGATAAACCCGTTGCTCAAAAAACTGAACGAGGGTAACTACCGTGTTCCCCGCGCCAGCGGGGATAAACCGATTGTGTTGTCGCCGCTAGTGGCTTGGGTTAAGTGTTCCCCGCGCCAGCGGGGATAAACCGAATATCCACTTAAACACAACCATTATTCGCTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTTCTCACCGCGCCAGCGGGGATAAACCGCCGGCATCAGCGCCGATCCGTTCATAGTGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTCCGTCAGGTTGGATCGGATGGCATTCCGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCTTTCATTGCGCAGGGTATGCAGTCGGTTTCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCAGCGCGGTATTGAGGCCGGGGACCGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGAACAGGAACAGGAAAAAAAAGATTTGTCCGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGACGTTTTAACAGGGTAATATTTACTTAATTATGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTACTTTATTATCTCTCGCATAGACCCGGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTACTTTATTATCTCTCGCATAGACCCGGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGTCATTTTAAAGAATCCCGTTAAACAACACGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGTTATGCGCAAAAATTAATTCATATTATAGTGTTCCCCGCGCCAGCAGGGATAAACCGGACGAGTTCTGGAAATGGTTAGCTGATAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTCATCGGCAGCGTCACGCAATATGAAGATGTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP015923|2|1|936038-936189|PILER-CR
TGTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCGTATTTCGATTGTCTGGACATTTCGTA
CGTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGAATATGATTTATATAGAACCAATGAAC
TGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGCGTGTGTTGTTGAGGATCAGTCTGGAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGGCCATGTTCTTTTCCCTCTAAAAAATCCGGTGTTCCCCGCGCCAGCGGGGATAAACCCGTT	GCTCAAAAAACTGAACGAGGGTAACTACCGTGT
TCCCCGCGCCAGCGGGGATAAACCGATTGTGT	TGTCGCCGCTAGTGGCTTGGGTTAAGTGT
TCCCCGCGCCAGCGGGGATAAACCGAATATCCACTTAAACACAACCATTATTCGCTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTTCTCACCGCGCCAGCGGGGATAAACCGCCGGCATCAGCGCCGATCCGTTCATAGTGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCCGTCAGGTTGGATCGGATGGCATTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTTCATTGCGCAGGGTATGCAGTCGGTTTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCAGCGCGGTATTGAGGCCGGGGACCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGGAACAGGAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTTTTAACAGGGTAATATTTACTTAATTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTACTTTATTATCTCTCGCATAGACCCGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTACTTTATTATCTCTCGCATAGACCCGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTCATTTTAAAGAATCCCGTTAAACAACAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA


>NZ_CP015923|2|2|936039-937256|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCGTATTTCGATTGTCTGGACATTTCGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGAATATGATTTATATAGAACCAATGAACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGCGTGTGTTGTTGAGGATCAGTCTGGAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGCCATGTTCTTTTCCCTCTAAAAAATCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCC	GTTGCTCAAAAAACTGAACGAGGGTAACTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGTGTTGTCGCCGCTAGTGGCTTGGGTTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATATCCACTTAAACACAACCATTATTCGCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTTCTCACCGCGCCAGCGGGGATAAACCGCCGGCATCAGCGCCGATCCGTTCATAGTGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCCGTCAGGTTGGATCGGATGGCATTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTTCATTGCGCAGGGTATGCAGTCGGTTTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCAGCGCGGTATTGAGGCCGGGGACCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGGAACAGGAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTTTTAACAGGGTAATATTTACTTAATTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTACTTTATTATCTCTCGCATAGACCCGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTACTTTATTATCTCTCGCATAGACCCGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTCATTTTAAAGAATCCCGTTAAACAACAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTCATCGGCAGCGTCACGCAATATGAAGAT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP015923|2|1|936039-937256|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCGTATTTCGATTGTCTGGACATTTCGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGAATATGATTTATATAGAACCAATGAACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGCGTGTGTTGTTGAGGATCAGTCTGGAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGCCATGTTCTTTTCCCTCTAAAAAATCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCC	GTTGCTCAAAAAACTGAACGAGGGTAACTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGTGTTGTCGCCGCTAGTGGCTTGGGTTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATATCCACTTAAACACAACCATTATTCGCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTTCTCACCGCGCCAGCGGGGATAAACCGCCGGCATCAGCGCCGATCCGTTCATAGTGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCCGTCAGGTTGGATCGGATGGCATTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTTCATTGCGCAGGGTATGCAGTCGGTTTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCAGCGCGGTATTGAGGCCGGGGACCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGGAACAGGAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTTTTAACAGGGTAATATTTACTTAATTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTACTTTATTATCTCTCGCATAGACCCGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTACTTTATTATCTCTCGCATAGACCCGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTCATTTTAAAGAATCCCGTTAAACAACAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTCATCGGCAGCGTCACGCAATATGAAGAT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP015923|2|2|936283-936436|PILER-CR
	TTGCGTATTTCGATTGTCTGGACATTTCGTA
CGTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGAATATGATTTATATAGAACCAATGAAC
TGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGCGTGTGTTGTTGAGGATCAGTCTGGAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGGCCATGTTCTTTTCCCTCTAAAAAATCCGGTGTTCCCCGCGCCAGCGGGGATAAACCCGTT	GCTCAAAAAACTGAACGAGGGTAACTACCGTGT
TCCCCGCGCCAGCGGGGATAAACCGATTGTGT	TGTCGCCGCTAGTGGCTTGGGTTAAGTGT
TCCCCGCGCCAGCGGGGATAAACCGAATATCCACTTAAACACAACCATTATTCGCTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTTCTCACCGCGCCAGCGGGGATAAACCGCCGGCATCAGCGCCGATCCGTTCATAGTGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCCGTCAGGTTGGATCGGATGGCATTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTTCATTGCGCAGGGTATGCAGTCGGTTTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCAGCGCGGTATTGAGGCCGGGGACCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGGAACAGGAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTTTTAACAGGGTAATATTTACTTAATTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTACTTTATTATCTCTCGCATAGACCCGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTACTTTATTATCTCTCGCATAGACCCGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTCATTTTAAAGAATCCCGTTAAACAACAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA


>NZ_CP015923|2|3|936557-937195|PILER-CR
	TTGCGTATTTCGATTGTCTGGACATTTCGTA
CGTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGAATATGATTTATATAGAACCAATGAAC
TGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGCGTGTGTTGTTGAGGATCAGTCTGGAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGGCCATGTTCTTTTCCCTCTAAAAAATCCGGTGTTCCCCGCGCCAGCGGGGATAAACCCGTT	GCTCAAAAAACTGAACGAGGGTAACTACCGTGT
TCCCCGCGCCAGCGGGGATAAACCGATTGTGT	TGTCGCCGCTAGTGGCTTGGGTTAAGTGT
TCCCCGCGCCAGCGGGGATAAACCGAATATCCACTTAAACACAACCATTATTCGCTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTTCTCACCGCGCCAGCGGGGATAAACCGCCGGCATCAGCGCCGATCCGTTCATAGTGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCCGTCAGGTTGGATCGGATGGCATTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTTCATTGCGCAGGGTATGCAGTCGGTTTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCAGCGCGGTATTGAGGCCGGGGACCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGGAACAGGAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTTTTAACAGGGTAATATTTACTTAATTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTACTTTATTATCTCTCGCATAGACCCGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTACTTTATTATCTCTCGCATAGACCCGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTCATTTTAAAGAATCCCGTTAAACAACAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015923.1\|WP_000186400.1\|923022_925779_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP015923.1\|WP_000210863.1\|931916_933554_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP015923.1\|WP_000480218.1\|929502_929859_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|226136
NZ_CP015923.1\|WP_001199961.1\|935070_935742_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP015923.1\|WP_000029526.1\|949186_949735_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP015923.1\|WP_000210924.1\|939024_940824_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP015923.1\|WP_001290655.1\|940823_942536_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP015923.1\|WP_000226839.1\|927183_929433_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP015923.1\|WP_000036734.1\|933636_934935_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP015923.1\|WP_000210449.1\|930888_931689_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP015923.1\|WP_001208002.1\|937353_938151_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP015923.1\|WP_000029747.1\|944955_947619_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP015923.1\|WP_001145544.1\|943558_944512_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP015923.1\|WP_000368586.1\|947630_949190_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP015923.1\|WP_000206421.1\|949748_950807_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP015923.1\|WP_000080405.1\|942611_943346_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP015923.1\|WP_000706493.1\|921836_922979_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
NZ_CP015923.1\|WP_000046856.1\|925836_927132_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP015923.1\|WP_001532579.1\|929824_930121_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP015923.1\|WP_000108313.1\|938238_938601_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264

Protein	Function_ID	Function_description	E-value
NZ_CP015923.1\|WP_000186400.1\|923022_925779_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP015923.1\|WP_000210863.1\|931916_933554_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP015923.1\|WP_000480218.1\|929502_929859_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20
NZ_CP015923.1\|WP_001199961.1\|935070_935742_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP015923.1\|WP_000029526.1\|949186_949735_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.80691e-33
NZ_CP015923.1\|WP_000210924.1\|939024_940824_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP015923.1\|WP_001290655.1\|940823_942536_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP015923.1\|WP_000226839.1\|927183_929433_+\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP015923.1\|WP_000036734.1\|933636_934935_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP015923.1\|WP_000210449.1\|930888_931689_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.52469e-158
NZ_CP015923.1\|WP_001208002.1\|937353_938151_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	5.39566e-102
NZ_CP015923.1\|WP_000029747.1\|944955_947619_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP015923.1\|WP_001145544.1\|943558_944512_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP015923.1\|WP_000368586.1\|947630_949190_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	5.17383e-173
NZ_CP015923.1\|WP_000206421.1\|949748_950807_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	9.1402e-138
NZ_CP015923.1\|WP_000080405.1\|942611_943346_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.61797e-139
NZ_CP015923.1\|WP_000706493.1\|921836_922979_+\|glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	0
NZ_CP015923.1\|WP_000046856.1\|925836_927132_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP015923.1\|WP_001532579.1\|929824_930121_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	1.63617e-13
NZ_CP015923.1\|WP_000108313.1\|938238_938601_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58

>NZ_CP015923.1|WP_001199961.1|935070_935742_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP015923.1|WP_000036734.1|933636_934935_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP015923.1|WP_000210863.1|931916_933554_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP015923.1|WP_000210449.1|930888_931689_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP015923.1|WP_001532579.1|929824_930121_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRMVKLTPKASEDLENIWHYGWQHFGEIQADRYINHLSEIFSIMSANNIGTPRPELGEYIYALPFKRHIIYFIQSVTEVIVIRILSQNQDAGKHVNWL
>NZ_CP015923.1|WP_000480218.1|929502_929859_+|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>NZ_CP015923.1|WP_000226839.1|927183_929433_+|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNIQAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGGVNPRQ
>NZ_CP015923.1|WP_000046856.1|925836_927132_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLEALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVVGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>NZ_CP015923.1|WP_000186400.1|923022_925779_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>NZ_CP015923.1|WP_000706493.1|921836_922979_+|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATVGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLTADVSVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR
>NZ_CP015923.1|WP_001208002.1|937353_938151_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRGPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP015923.1|WP_000108313.1|938238_938601_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP015923.1|WP_000210924.1|939024_940824_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLAATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDELGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP015923.1|WP_001290655.1|940823_942536_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP015923.1|WP_000080405.1|942611_943346_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP015923.1|WP_001145544.1|943558_944512_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NZ_CP015923.1|WP_000029747.1|944955_947619_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSARKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMEKTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCVAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRADKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYTSGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDCAACGYSANEGLIGMMGE
>NZ_CP015923.1|WP_000368586.1|947630_949190_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVNLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRSALKEAWFANAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP015923.1|WP_000029526.1|949186_949735_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKADWHVTALAITAVLAAHIKFIDERQSFATQLGQKKSGDNPVMSKLRFSRLSAVKNPDELLRHLRRAVQLLDGSVNLISLADDIFRWCQEQDDLLNHHRRQQRPTEFLRIRWALEYYQAGDNEQD
>NZ_CP015923.1|WP_000206421.1|949748_950807_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILIESGIDAKKAVEYVKNIANYFGKVKAEKKPKDELTNAETGQLVHISPAEFEGVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLAEKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICINKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA

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Crispr_ID: NZ_CP015923_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015923_3

953503-954324

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
TGTTCCCCGCGCCAGCGGGGATAAAC	PILER-CR

13 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP015923_3

>merge|NZ_CP015923|3|953503-954324|CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGCCAGCCTGTAGCGTGGGGGCGTTGGGTAGCCTGTGTTCCCCGCGCCAGCGGGGATAAACCGCATCTTTTACGCATGTTGATGTGCGTTCAAATGTGTTCCCCGCGCCAGCGGGGATAAACCGAAATCGTCAATAAAATTATTGGCGCGCCATCCGTGTTCCCCGCGCCAGCGGGGATAAACCGATAATTTGCTGAACTACGTCCGTATTGAGCTGGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGCCGGAGCCTAAAGACGGGGAGCCGCGTTTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGGGTGATAACCGCCTCGCTGAACGCTACGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAGTGAAAAATTGCGGTTCGTCCTCCTCATCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGACTAACGAAAGATTAAACCAGCGCATTGAGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCATTCGCTCAATAGCGGCCCGCGTGGCGGTGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGATTATGTCCTCTAAAGACTGGCTAATCACGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCGCCCTGCGTGATTTTGAAAATCTGGTGGAGTGTTCCCCGCGCCAGCGGGGATAAGCCGTTGAATACGTCGCGATACCAGTCACTCCGGAAGTCTTCCCCGCGCTAGCGGGGATAAACCGAGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAAATGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP015923|3|3|953503-954324|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCTGTAGCGTGGGGGCGTTGGGTAGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATCTTTTACGCATGTTGATGTGCGTTCAAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATCGTCAATAAAATTATTGGCGCGCCATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATAATTTGCTGAACTACGTCCGTATTGAGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCCGGAGCCTAAAGACGGGGAGCCGCGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGGTGATAACCGCCTCGCTGAACGCTACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTGAAAAATTGCGGTTCGTCCTCCTCATCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTAACGAAAGATTAAACCAGCGCATTGAGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTCGCTCAATAGCGGCCCGCGTGGCGGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATTATGTCCTCTAAAGACTGGCTAATCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGCCCTGCGTGATTTTGAAAATCTGGTGGA
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	TTGAATACGTCGCGATACCAGTCACTCCGGAA
GTCTTCCCCGCGCTAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP015923|3|2|953503-954324|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCTGTAGCGTGGGGGCGTTGGGTAGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATCTTTTACGCATGTTGATGTGCGTTCAAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATCGTCAATAAAATTATTGGCGCGCCATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATAATTTGCTGAACTACGTCCGTATTGAGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCCGGAGCCTAAAGACGGGGAGCCGCGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGGTGATAACCGCCTCGCTGAACGCTACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTGAAAAATTGCGGTTCGTCCTCCTCATCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTAACGAAAGATTAAACCAGCGCATTGAGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTCGCTCAATAGCGGCCCGCGTGGCGGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATTATGTCCTCTAAAGACTGGCTAATCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGCCCTGCGTGATTTTGAAAATCTGGTGGA
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	TTGAATACGTCGCGATACCAGTCACTCCGGAA
GTCTTCCCCGCGCTAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP015923|3|4|953504-954322|PILER-CR
TGTTCCCCGCGCCAGCGGGGATAAAC	CGCCAGCCTGTAGCGTGGGGGCGTTGGGTAGCCTG
TGTTCCCCGCGCCAGCGGGGATAAAC	CGCATCTTTTACGCATGTTGATGTGCGTTCAAATG
TGTTCCCCGCGCCAGCGGGGATAAAC	CGAAATCGTCAATAAAATTATTGGCGCGCCATCCG
TGTTCCCCGCGCCAGCGGGGATAAAC	CGATAATTTGCTGAACTACGTCCGTATTGAGCTGG
TGTTCCCCGCGCCAGCGGGGATAAAC	CGTGGCCGGAGCCTAAAGACGGGGAGCCGCGTTTG
TGTTCCCCGCGCCAGCGGGGATAAAC	CGGGGGGTGATAACCGCCTCGCTGAACGCTACGCG
TGTTCCCCGCGCCAGCGGGGATAAAC	CGAGTGAAAAATTGCGGTTCGTCCTCCTCATCGTG
TGTTCCCCGCGCCAGCGGGGATAAAC	CGACTAACGAAAGATTAAACCAGCGCATTGAGTTG
TGTTCCCCGCGCCAGCGGGGATAAAC	CGCATTCGCTCAATAGCGGCCCGCGTGGCGGTGAG
TGTTCCCCGCGCCAGCGGGGATAAAC	CGGGGATTATGTCCTCTAAAGACTGGCTAATCACG
TGTTCCCCGCGCCAGCGGGGATAAAC	CGCGCGCCCTGCGTGATTTTGAAAATCTGGTGGAG
TGTTCCCCGCGCCAGCGGGGATAAGC	CGTTGAATACGTCGCGATACCAGTCACTCCGGAAG
TCTTCCCCGCGCTAGCGGGGATAAAC	CGAGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAAA
TGTTCCCCGCGTCAGCGGGGATAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015923.1\|WP_000029526.1\|949186_949735_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP015923.1\|WP_000144835.1\|952192_953113_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP015923.1\|WP_000517480.1\|959149_959461_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP015923.1\|WP_000080405.1\|942611_943346_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP015923.1\|WP_001173663.1\|957979_958585_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP015923.1\|WP_001537530.1\|958635_958959_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP015923.1\|WP_000741650.1\|959479_960190_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP015923.1\|WP_001145544.1\|943558_944512_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP015923.1\|WP_001221537.1\|961695_962457_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP015923.1\|WP_000206421.1\|949748_950807_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP015923.1\|WP_000281481.1\|951545_952196_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP015923.1\|WP_000029747.1\|944955_947619_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP015923.1\|WP_001092256.1\|956553_957993_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP015923.1\|WP_001219244.1\|960189_960669_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP015923.1\|WP_000368586.1\|947630_949190_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP015923.1\|WP_000372381.1\|955635_956544_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP015923.1\|WP_000490481.1\|954338_955385_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP015923.1\|WP_000085110.1\|950817_951564_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP015923.1\|WP_000134246.1\|960665_961715_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP015923.1\|WP_001518648.1\|953112_953406_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930

Protein	Function_ID	Function_description	E-value
NZ_CP015923.1\|WP_000029526.1\|949186_949735_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.80691e-33
NZ_CP015923.1\|WP_000144835.1\|952192_953113_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.09819e-157
NZ_CP015923.1\|WP_000517480.1\|959149_959461_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP015923.1\|WP_000080405.1\|942611_943346_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.61797e-139
NZ_CP015923.1\|WP_001173663.1\|957979_958585_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP015923.1\|WP_001537530.1\|958635_958959_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.31009e-48
NZ_CP015923.1\|WP_000741650.1\|959479_960190_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.67998e-119
NZ_CP015923.1\|WP_001145544.1\|943558_944512_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP015923.1\|WP_001221537.1\|961695_962457_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	7.64916e-147
NZ_CP015923.1\|WP_000206421.1\|949748_950807_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	9.1402e-138
NZ_CP015923.1\|WP_000281481.1\|951545_952196_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	6.2871e-76
NZ_CP015923.1\|WP_000029747.1\|944955_947619_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP015923.1\|WP_001092256.1\|956553_957993_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP015923.1\|WP_001219244.1\|960189_960669_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_CP015923.1\|WP_000368586.1\|947630_949190_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	5.17383e-173
NZ_CP015923.1\|WP_000372381.1\|955635_956544_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP015923.1\|WP_000490481.1\|954338_955385_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP015923.1\|WP_000085110.1\|950817_951564_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.38373e-47
NZ_CP015923.1\|WP_000134246.1\|960665_961715_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP015923.1\|WP_001518648.1\|953112_953406_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62

>NZ_CP015923.1|WP_001518648.1|953112_953406_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP015923.1|WP_000144835.1|952192_953113_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIKPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP015923.1|WP_000281481.1|951545_952196_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTICKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLRETSVDAYRQQQIHREKSRQMIQFSSVDYTGVLVLNDPVLFLQRLAQGYGKSRAFGCGMMMIKPGDDA
>NZ_CP015923.1|WP_000085110.1|950817_951564_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLEGNAADVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP015923.1|WP_000206421.1|949748_950807_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILIESGIDAKKAVEYVKNIANYFGKVKAEKKPKDELTNAETGQLVHISPAEFEGVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLAEKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICINKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>NZ_CP015923.1|WP_000029526.1|949186_949735_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKADWHVTALAITAVLAAHIKFIDERQSFATQLGQKKSGDNPVMSKLRFSRLSAVKNPDELLRHLRRAVQLLDGSVNLISLADDIFRWCQEQDDLLNHHRRQQRPTEFLRIRWALEYYQAGDNEQD
>NZ_CP015923.1|WP_000368586.1|947630_949190_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVNLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRSALKEAWFANAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP015923.1|WP_000029747.1|944955_947619_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSARKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMEKTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCVAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRADKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYTSGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDCAACGYSANEGLIGMMGE
>NZ_CP015923.1|WP_001145544.1|943558_944512_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NZ_CP015923.1|WP_000080405.1|942611_943346_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP015923.1|WP_000490481.1|954338_955385_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP015923.1|WP_000372381.1|955635_956544_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDHFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP015923.1|WP_001092256.1|956553_957993_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP015923.1|WP_001173663.1|957979_958585_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP015923.1|WP_001537530.1|958635_958959_+|DUF3561-family-protein
MRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP015923.1|WP_000517480.1|959149_959461_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP015923.1|WP_000741650.1|959479_960190_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLYDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP015923.1|WP_001219244.1|960189_960669_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP015923.1|WP_000134246.1|960665_961715_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP015923.1|WP_001221537.1|961695_962457_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015923_3	3.5\|953776\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953776-953807	32	NZ_CP027613	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence	89096-89127	4	0.875
NZ_CP015923_3	3.5\|953776\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953776-953807	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	37931-37962	4	0.875
NZ_CP015923_3	3.5\|953776\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953776-953807	32	CP051275	Salmonella phage SW-37, complete genome	24498-24529	4	0.875
NZ_CP015923_3	3.5\|953776\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953776-953807	32	MW013502	Salmonella virus L cI-40 13-am43, complete genome	22995-23026	4	0.875
NZ_CP015923_3	3.5\|953776\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953776-953807	32	MN098327	Klebsiella phage Mulock, complete genome	37856-37887	4	0.875
NZ_CP015923_3	3.5\|953776\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953776-953807	32	NC_004348	Enterobacteria phage ST64T, complete genome	6181-6212	4	0.875
NZ_CP015923_3	3.5\|953776\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953776-953807	32	MW013503	Salmonella virus L cII-101, complete genome	22995-23026	4	0.875
NZ_CP015923_3	3.5\|953776\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953776-953807	32	NC_018275	Salmonella phage vB_SemP_Emek, complete genome	23161-23192	4	0.875
NZ_CP015923_3	3.5\|953776\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953776-953807	32	NC_042346	Salmonella virus BTP1 genome assembly, chromosome: BTP1	21878-21909	4	0.875
NZ_CP015923_3	3.5\|953776\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953776-953807	32	AY052766	Salmonella typhimurium bacteriophage ST64T, complete genome	6181-6212	4	0.875
NZ_CP015923_3	3.5\|953776\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953776-953807	32	MF188997	Salmonella phage vB_SalP_PM43, complete genome	6181-6212	4	0.875
NZ_CP015923_3	3.18\|953774\|35\|NZ_CP015923\|PILER-CR	953774-953808	35	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	37929-37963	5	0.857
NZ_CP015923_3	3.18\|953774\|35\|NZ_CP015923\|PILER-CR	953774-953808	35	CP051275	Salmonella phage SW-37, complete genome	24496-24530	5	0.857
NZ_CP015923_3	3.18\|953774\|35\|NZ_CP015923\|PILER-CR	953774-953808	35	MW013502	Salmonella virus L cI-40 13-am43, complete genome	22994-23028	5	0.857
NZ_CP015923_3	3.18\|953774\|35\|NZ_CP015923\|PILER-CR	953774-953808	35	NC_004348	Enterobacteria phage ST64T, complete genome	6180-6214	5	0.857
NZ_CP015923_3	3.18\|953774\|35\|NZ_CP015923\|PILER-CR	953774-953808	35	MW013503	Salmonella virus L cII-101, complete genome	22994-23028	5	0.857
NZ_CP015923_3	3.18\|953774\|35\|NZ_CP015923\|PILER-CR	953774-953808	35	NC_018275	Salmonella phage vB_SemP_Emek, complete genome	23160-23194	5	0.857
NZ_CP015923_3	3.18\|953774\|35\|NZ_CP015923\|PILER-CR	953774-953808	35	AY052766	Salmonella typhimurium bacteriophage ST64T, complete genome	6180-6214	5	0.857
NZ_CP015923_3	3.18\|953774\|35\|NZ_CP015923\|PILER-CR	953774-953808	35	MF188997	Salmonella phage vB_SalP_PM43, complete genome	6180-6214	5	0.857
NZ_CP015923_3	3.5\|953776\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953776-953807	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	11202-11233	6	0.812
NZ_CP015923_3	3.5\|953776\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953776-953807	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	115172-115203	6	0.812
NZ_CP015923_3	3.18\|953774\|35\|NZ_CP015923\|PILER-CR	953774-953808	35	NC_042346	Salmonella virus BTP1 genome assembly, chromosome: BTP1	21877-21911	6	0.829
NZ_CP015923_3	3.18\|953774\|35\|NZ_CP015923\|PILER-CR	953774-953808	35	NZ_CP027613	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence	89094-89128	6	0.829
NZ_CP015923_3	3.18\|953774\|35\|NZ_CP015923\|PILER-CR	953774-953808	35	MN098327	Klebsiella phage Mulock, complete genome	37854-37888	6	0.829
NZ_CP015923_2	2.23\|936380\|29\|NZ_CP015923\|PILER-CR	936380-936408	29	NZ_CP049908	Hymenobacter sp. HDW8 plasmid p_unnamed1, complete sequence	128317-128345	7	0.759
NZ_CP015923_2	2.23\|936380\|29\|NZ_CP015923\|PILER-CR	936380-936408	29	NZ_CP037921	Hymenobacter sp. 17J36-26 plasmid unnamed1, complete sequence	39704-39732	7	0.759
NZ_CP015923_3	3.3\|953654\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953654-953685	32	NZ_CP050083	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence	24085-24116	7	0.781
NZ_CP015923_3	3.18\|953774\|35\|NZ_CP015923\|PILER-CR	953774-953808	35	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	11201-11235	7	0.8
NZ_CP015923_3	3.18\|953774\|35\|NZ_CP015923\|PILER-CR	953774-953808	35	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	115171-115205	7	0.8
NZ_CP015923_2	2.2\|936129\|31\|NZ_CP015923\|PILER-CR	936129-936159	31	NC_011255	Borrelia recurrentis A1 plasmid pl35, complete sequence	27907-27937	8	0.742
NZ_CP015923_2	2.2\|936129\|31\|NZ_CP015923\|PILER-CR	936129-936159	31	NC_011249	Borrelia duttonii Ly plasmid pl36, complete sequence	31226-31256	8	0.742
NZ_CP015923_2	2.2\|936129\|31\|NZ_CP015923\|PILER-CR	936129-936159	31	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	360900-360930	8	0.742
NZ_CP015923_2	2.2\|936129\|31\|NZ_CP015923\|PILER-CR	936129-936159	31	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	234035-234065	8	0.742
NZ_CP015923_2	2.6\|936251\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	936251-936282	32	NZ_CP042626	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-11, complete sequence	1117-1148	8	0.75
NZ_CP015923_3	3.1\|953532\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953532-953563	32	NZ_CP032319	Hymenobacter oligotrophus strain sh-6 plasmid unnamed2, complete sequence	4010-4041	8	0.75
NZ_CP015923_3	3.4\|953715\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953715-953746	32	NZ_CP032703	Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence	17112-17143	8	0.75
NZ_CP015923_3	3.6\|953837\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953837-953868	32	NC_016907	Gordonia polyisoprenivorans VH2 plasmid p174, complete sequence	64697-64728	8	0.75
NZ_CP015923_3	3.6\|953837\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953837-953868	32	NZ_CP010858	Marinovum algicola DG 898 plasmid pMaD3	3485-3516	8	0.75
NZ_CP015923_2	2.3\|936068\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	936068-936099	32	MT711528	Escherichia phage vB_EcoS_fTaEco03, complete genome	12261-12292	9	0.719
NZ_CP015923_2	2.3\|936068\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	936068-936099	32	MT711525	Escherichia phage vB_EcoS_fKuEco01, complete genome	11823-11854	9	0.719
NZ_CP015923_2	2.3\|936068\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	936068-936099	32	GU196278	Escherichia phage K1H, complete genome	12039-12070	9	0.719
NZ_CP015923_2	2.3\|936068\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	936068-936099	32	NC_027993	Escherichia phage K1G, complete genome	13924-13955	9	0.719
NZ_CP015923_2	2.3\|936068\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	936068-936099	32	MT711527	Escherichia phage vB_EcoS_fTaEco01, complete genome	11822-11853	9	0.719
NZ_CP015923_2	2.4\|936129\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	936129-936160	32	NC_011255	Borrelia recurrentis A1 plasmid pl35, complete sequence	27906-27937	9	0.719
NZ_CP015923_2	2.4\|936129\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	936129-936160	32	NC_011249	Borrelia duttonii Ly plasmid pl36, complete sequence	31225-31256	9	0.719
NZ_CP015923_2	2.4\|936129\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	936129-936160	32	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	360899-360930	9	0.719
NZ_CP015923_2	2.4\|936129\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	936129-936160	32	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	234035-234066	9	0.719
NZ_CP015923_2	2.14\|936769\|32\|NZ_CP015923\|CRISPRCasFinder,CRT,PILER-CR	936769-936800	32	MN694645	Marine virus AFVG_250M761, complete genome	31050-31081	9	0.719
NZ_CP015923_3	3.1\|953532\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953532-953563	32	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	264920-264951	9	0.719
NZ_CP015923_3	3.3\|953654\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953654-953685	32	NZ_CP031397	Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence	50720-50751	9	0.719
NZ_CP015923_3	3.3\|953654\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953654-953685	32	NZ_CP019854	Borreliella burgdorferi plasmid lp54, complete sequence	50432-50463	9	0.719
NZ_CP015923_3	3.3\|953654\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953654-953685	32	NZ_CP019765	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence	50432-50463	9	0.719
NZ_CP015923_3	3.3\|953654\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953654-953685	32	NC_011784	Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence	50419-50450	9	0.719
NZ_CP015923_3	3.3\|953654\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953654-953685	32	NZ_CP017218	Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence	3209-3240	9	0.719
NZ_CP015923_3	3.3\|953654\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953654-953685	32	NC_013130	Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence	50566-50597	9	0.719
NZ_CP015923_3	3.3\|953654\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953654-953685	32	NC_013129	Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence	49711-49742	9	0.719
NZ_CP015923_3	3.3\|953654\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953654-953685	32	NC_001857	Borreliella burgdorferi B31 plasmid lp54, complete sequence	50439-50470	9	0.719
NZ_CP015923_3	3.5\|953776\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953776-953807	32	NZ_CP022925	Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B	25058-25082	9	0.719
NZ_CP015923_3	3.12\|954203\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	954203-954234	32	NZ_CP050096	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence	151458-151489	9	0.719
NZ_CP015923_3	3.12\|954203\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	954203-954234	32	NZ_CP050102	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence	132694-132725	9	0.719
NZ_CP015923_3	3.12\|954203\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	954203-954234	32	NZ_CP050107	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence	169943-169974	9	0.719
NZ_CP015923_3	3.12\|954203\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	954203-954234	32	NZ_CP050112	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence	169942-169973	9	0.719
NZ_CP015923_3	3.12\|954203\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	954203-954234	32	NZ_CP048285	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248a, complete sequence	30547-30578	9	0.719
NZ_CP015923_2	2.1\|936068\|31\|NZ_CP015923\|PILER-CR	936068-936098	31	MT711528	Escherichia phage vB_EcoS_fTaEco03, complete genome	12262-12292	10	0.677
NZ_CP015923_2	2.1\|936068\|31\|NZ_CP015923\|PILER-CR	936068-936098	31	MT711525	Escherichia phage vB_EcoS_fKuEco01, complete genome	11824-11854	10	0.677
NZ_CP015923_2	2.1\|936068\|31\|NZ_CP015923\|PILER-CR	936068-936098	31	GU196278	Escherichia phage K1H, complete genome	12040-12070	10	0.677
NZ_CP015923_2	2.1\|936068\|31\|NZ_CP015923\|PILER-CR	936068-936098	31	NC_027993	Escherichia phage K1G, complete genome	13925-13955	10	0.677
NZ_CP015923_2	2.1\|936068\|31\|NZ_CP015923\|PILER-CR	936068-936098	31	MT711527	Escherichia phage vB_EcoS_fTaEco01, complete genome	11823-11853	10	0.677
NZ_CP015923_2	2.6\|936251\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	936251-936282	32	LR026976	Bacillus pumilus isolate 1 genome assembly, plasmid: p576	23626-23657	10	0.688
NZ_CP015923_2	2.6\|936251\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	936251-936282	32	NC_022882	Bacillus thuringiensis YBT-1518 plasmid pBMB0233, complete sequence	54509-54540	10	0.688
NZ_CP015923_2	2.15\|936830\|32\|NZ_CP015923\|CRISPRCasFinder,CRT,PILER-CR	936830-936861	32	KF751793	Campylobacter phage CJIE4-1, complete genome	18118-18149	10	0.688
NZ_CP015923_2	2.21\|937196\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	937196-937227	32	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	146919-146950	10	0.688
NZ_CP015923_3	3.1\|953532\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953532-953563	32	NZ_CP006373	Aureimonas sp. AU20 plasmid pAU20f, complete sequence	26111-26142	10	0.688
NZ_CP015923_3	3.2\|953593\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953593-953624	32	CP009871	Pantoea sp. PSNIH2 plasmid pPSP-cd6, complete sequence	51629-51660	10	0.688
NZ_CP015923_3	3.6\|953837\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953837-953868	32	NC_005262	Burkholderia cepacia phage Bcep22, complete genome	17206-17237	10	0.688
NZ_CP015923_3	3.6\|953837\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953837-953868	32	NZ_CP015746	Shinella sp. HZN7 plasmid pShin-10, complete sequence	61466-61497	10	0.688
NZ_CP015923_3	3.6\|953837\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953837-953868	32	NZ_CP019446	Kosakonia cowanii JCM 10956 = DSM 18146 strain 888-76 plasmid p888-76-1, complete sequence	17753-17784	10	0.688
NZ_CP015923_3	3.6\|953837\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	953837-953868	32	NZ_CP032923	Agrobacterium tumefaciens strain 1D1108 plasmid pAt1D1108a, complete sequence	101360-101391	10	0.688
NZ_CP015923_3	3.9\|954020\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	954020-954051	32	NC_019957	Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence	63429-63460	10	0.688
NZ_CP015923_3	3.13\|954264\|32\|NZ_CP015923\|CRISPRCasFinder,CRT	954264-954295	32	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	47822-47853	11	0.656

1. spacer 3.5|953776|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP027613 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggagagccgcgcct	Protospacer
*********** ********.********..*

2. spacer 3.5|953776|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggcgagccgcggct	Protospacer
*********** ******** ******** .*

3. spacer 3.5|953776|32|NZ_CP015923|CRISPRCasFinder,CRT matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggtgagccgcggct	Protospacer
*********** ******** ******** .*

4. spacer 3.5|953776|32|NZ_CP015923|CRISPRCasFinder,CRT matches to MW013502 (Salmonella virus L cI-40 13-am43, complete genome) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggcgagccgcggct	Protospacer
*********** ******** ******** .*

5. spacer 3.5|953776|32|NZ_CP015923|CRISPRCasFinder,CRT matches to MN098327 (Klebsiella phage Mulock, complete genome) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggagagccgcgcct	Protospacer
*********** ********.********..*

6. spacer 3.5|953776|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NC_004348 (Enterobacteria phage ST64T, complete genome) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggcgagccgcggct	Protospacer
*********** ******** ******** .*

7. spacer 3.5|953776|32|NZ_CP015923|CRISPRCasFinder,CRT matches to MW013503 (Salmonella virus L cII-101, complete genome) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggcgagccgcggct	Protospacer
*********** ******** ******** .*

8. spacer 3.5|953776|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NC_018275 (Salmonella phage vB_SemP_Emek, complete genome) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggcgagccgcggct	Protospacer
*********** ******** ******** .*

9. spacer 3.5|953776|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NC_042346 (Salmonella virus BTP1 genome assembly, chromosome: BTP1) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggcgagccgcggct	Protospacer
*********** ******** ******** .*

10. spacer 3.5|953776|32|NZ_CP015923|CRISPRCasFinder,CRT matches to AY052766 (Salmonella typhimurium bacteriophage ST64T, complete genome) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggcgagccgcggct	Protospacer
*********** ******** ******** .*

11. spacer 3.5|953776|32|NZ_CP015923|CRISPRCasFinder,CRT matches to MF188997 (Salmonella phage vB_SalP_PM43, complete genome) position: , mismatch: 4, identity: 0.875

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggcgagccgcggct	Protospacer
*********** ******** ******** .*

12. spacer 3.18|953774|35|NZ_CP015923|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.857

cgtggccggagcctaaagacggggagccgcgtttg	CRISPR spacer
agtggccggagccgaaagacggcgagccgcggctg	Protospacer
 ************ ******** ******** .**

13. spacer 3.18|953774|35|NZ_CP015923|PILER-CR matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 5, identity: 0.857

cgtggccggagcctaaagacggggagccgcgtttg	CRISPR spacer
agtggccggagccgaaagacggtgagccgcggctg	Protospacer
 ************ ******** ******** .**

14. spacer 3.18|953774|35|NZ_CP015923|PILER-CR matches to MW013502 (Salmonella virus L cI-40 13-am43, complete genome) position: , mismatch: 5, identity: 0.857

cgtggccggagcctaaagacggggagccgcgtttg	CRISPR spacer
agtggccggagccgaaagacggcgagccgcggctg	Protospacer
 ************ ******** ******** .**

15. spacer 3.18|953774|35|NZ_CP015923|PILER-CR matches to NC_004348 (Enterobacteria phage ST64T, complete genome) position: , mismatch: 5, identity: 0.857

cgtggccggagcctaaagacggggagccgcgtttg	CRISPR spacer
agtggccggagccgaaagacggcgagccgcggctg	Protospacer
 ************ ******** ******** .**

16. spacer 3.18|953774|35|NZ_CP015923|PILER-CR matches to MW013503 (Salmonella virus L cII-101, complete genome) position: , mismatch: 5, identity: 0.857

cgtggccggagcctaaagacggggagccgcgtttg	CRISPR spacer
agtggccggagccgaaagacggcgagccgcggctg	Protospacer
 ************ ******** ******** .**

17. spacer 3.18|953774|35|NZ_CP015923|PILER-CR matches to NC_018275 (Salmonella phage vB_SemP_Emek, complete genome) position: , mismatch: 5, identity: 0.857

cgtggccggagcctaaagacggggagccgcgtttg	CRISPR spacer
agtggccggagccgaaagacggcgagccgcggctg	Protospacer
 ************ ******** ******** .**

18. spacer 3.18|953774|35|NZ_CP015923|PILER-CR matches to AY052766 (Salmonella typhimurium bacteriophage ST64T, complete genome) position: , mismatch: 5, identity: 0.857

cgtggccggagcctaaagacggggagccgcgtttg	CRISPR spacer
agtggccggagccgaaagacggcgagccgcggctg	Protospacer
 ************ ******** ******** .**

19. spacer 3.18|953774|35|NZ_CP015923|PILER-CR matches to MF188997 (Salmonella phage vB_SalP_PM43, complete genome) position: , mismatch: 5, identity: 0.857

cgtggccggagcctaaagacggggagccgcgtttg	CRISPR spacer
agtggccggagccgaaagacggcgagccgcggctg	Protospacer
 ************ ******** ******** .**

20. spacer 3.5|953776|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
gtgccggagccgaaagacggcgagccgcggct	Protospacer
  ********* ******** ******** .*

21. spacer 3.5|953776|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
gtgccggagccgaaagacggcgagccgcggct	Protospacer
  ********* ******** ******** .*

22. spacer 3.18|953774|35|NZ_CP015923|PILER-CR matches to NC_042346 (Salmonella virus BTP1 genome assembly, chromosome: BTP1) position: , mismatch: 6, identity: 0.829

cgtggccggagcctaaagacggggagccgcgtttg	CRISPR spacer
agtggccggagccgaaagacggcgagccgcggcta	Protospacer
 ************ ******** ******** .*.

23. spacer 3.18|953774|35|NZ_CP015923|PILER-CR matches to NZ_CP027613 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.829

cgtggccggagcctaaagacggggagccgcgtttg	CRISPR spacer
aatggccggagccgaaagacggagagccgcgcctg	Protospacer
 .*********** ********.********..**

24. spacer 3.18|953774|35|NZ_CP015923|PILER-CR matches to MN098327 (Klebsiella phage Mulock, complete genome) position: , mismatch: 6, identity: 0.829

cgtggccggagcctaaagacggggagccgcgtttg	CRISPR spacer
aatggccggagccgaaagacggagagccgcgcctg	Protospacer
 .*********** ********.********..**

25. spacer 2.23|936380|29|NZ_CP015923|PILER-CR matches to NZ_CP049908 (Hymenobacter sp. HDW8 plasmid p_unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

gtgttgtcgccgctagtggcttgggttaa	CRISPR spacer
ggattgtcgccgctagtggcatggagaga	Protospacer
* .***************** ***.  .*

26. spacer 2.23|936380|29|NZ_CP015923|PILER-CR matches to NZ_CP037921 (Hymenobacter sp. 17J36-26 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

gtgttgtcgccgctagtggcttgggttaa	CRISPR spacer
ggattgtcgccgctagtggcatggagaga	Protospacer
* .***************** ***.  .*

27. spacer 3.3|953654|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 7, identity: 0.781

aaatcgtcaataaaattattggcgc--gccatcc	CRISPR spacer
ggatcgtcaatgaatttattggcgctggctat--	Protospacer
..*********.** **********  **.**

28. spacer 3.18|953774|35|NZ_CP015923|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.8

cgtggccggagcctaaagacggggagccgcgtttg	CRISPR spacer
cagtgccggagccgaaagacggcgagccgcggctg	Protospacer
*.  ********* ******** ******** .**

29. spacer 3.18|953774|35|NZ_CP015923|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.8

cgtggccggagcctaaagacggggagccgcgtttg	CRISPR spacer
cagtgccggagccgaaagacggcgagccgcggctg	Protospacer
*.  ********* ******** ******** .**

30. spacer 2.2|936129|31|NZ_CP015923|PILER-CR matches to NC_011255 (Borrelia recurrentis A1 plasmid pl35, complete sequence) position: , mismatch: 8, identity: 0.742

gcagaatatgatttatatagaaccaatgaac	CRISPR spacer
aaaaaatatgatttatatagaaataatttat	Protospacer
. *.****************** .***  *.

31. spacer 2.2|936129|31|NZ_CP015923|PILER-CR matches to NC_011249 (Borrelia duttonii Ly plasmid pl36, complete sequence) position: , mismatch: 8, identity: 0.742

gcagaatatgatttatatagaaccaatgaac	CRISPR spacer
aaaaaatatgatttatatagaaataatttat	Protospacer
. *.****************** .***  *.

32. spacer 2.2|936129|31|NZ_CP015923|PILER-CR matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 8, identity: 0.742

gcagaatatgatttatatagaaccaatgaac	CRISPR spacer
caccaataggatttatattgaaccaataatc	Protospacer
    **** ********* ********.* *

33. spacer 2.2|936129|31|NZ_CP015923|PILER-CR matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 8, identity: 0.742

gcagaatatgatttatatagaaccaatgaac	CRISPR spacer
caccaataggatttatattgaaccaataatc	Protospacer
    **** ********* ********.* *

34. spacer 2.6|936251|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP042626 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-11, complete sequence) position: , mismatch: 8, identity: 0.75

cgggccatgttcttttccctctaaaaaatccg	CRISPR spacer
ataaacatgattttttccctctaaaaaatccc	Protospacer
  .. **** *.*******************

35. spacer 3.1|953532|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP032319 (Hymenobacter oligotrophus strain sh-6 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ccagcctg--tagcgtgggggcgttgggtagcct	CRISPR spacer
--ggtgtggccagcgtggtagcgttgggtagcct	Protospacer
  .*. **  .******* .**************

36. spacer 3.4|953715|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP032703 (Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ataatttgctgaactacgtccgtattgagctg--	CRISPR spacer
aacgtttgctgaactttgtccgtatt--gccgac	Protospacer
*  .*********** .*********  **.*

37. spacer 3.6|953837|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NC_016907 (Gordonia polyisoprenivorans VH2 plasmid p174, complete sequence) position: , mismatch: 8, identity: 0.75

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
cggggtgatcaccgcctcgcggaaggtcttgc	Protospacer
 ******** ********** *** *.. .**

38. spacer 3.6|953837|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP010858 (Marinovum algicola DG 898 plasmid pMaD3) position: , mismatch: 8, identity: 0.75

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
cgtggtgatcaccggctcgctgaacggcctgc	Protospacer
 * ****** **** *********** . .**

39. spacer 2.3|936068|32|NZ_CP015923|CRISPRCasFinder,CRT matches to MT711528 (Escherichia phage vB_EcoS_fTaEco03, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgtatttcgattgtctggacatt-tcgtac	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttaca-	Protospacer
*****.******** ********... *...*

40. spacer 2.3|936068|32|NZ_CP015923|CRISPRCasFinder,CRT matches to MT711525 (Escherichia phage vB_EcoS_fKuEco01, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgtatttcgattgtctggacatt-tcgtac	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttaca-	Protospacer
*****.******** ********... *...*

41. spacer 2.3|936068|32|NZ_CP015923|CRISPRCasFinder,CRT matches to GU196278 (Escherichia phage K1H, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgtatttcgattgtctggacatt-tcgtac	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttaca-	Protospacer
*****.******** ********... *...*

42. spacer 2.3|936068|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NC_027993 (Escherichia phage K1G, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgtatttcgattgtctggacatt-tcgtac	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttaca-	Protospacer
*****.******** ********... *...*

43. spacer 2.3|936068|32|NZ_CP015923|CRISPRCasFinder,CRT matches to MT711527 (Escherichia phage vB_EcoS_fTaEco01, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgtatttcgattgtctggacatt-tcgtac	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttaca-	Protospacer
*****.******** ********... *...*

44. spacer 2.4|936129|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NC_011255 (Borrelia recurrentis A1 plasmid pl35, complete sequence) position: , mismatch: 9, identity: 0.719

gcagaatatgatttatatagaaccaatgaact	CRISPR spacer
aaaaaatatgatttatatagaaataatttata	Protospacer
. *.****************** .***  *.

45. spacer 2.4|936129|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NC_011249 (Borrelia duttonii Ly plasmid pl36, complete sequence) position: , mismatch: 9, identity: 0.719

gcagaatatgatttatatagaaccaatgaact	CRISPR spacer
aaaaaatatgatttatatagaaataatttata	Protospacer
. *.****************** .***  *.

46. spacer 2.4|936129|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 9, identity: 0.719

gcagaatatgatttatatagaaccaatgaact	CRISPR spacer
caccaataggatttatattgaaccaataatcc	Protospacer
    **** ********* ********.* *.

47. spacer 2.4|936129|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 9, identity: 0.719

gcagaatatgatttatatagaaccaatgaact	CRISPR spacer
caccaataggatttatattgaaccaataatcc	Protospacer
    **** ********* ********.* *.

48. spacer 2.14|936769|32|NZ_CP015923|CRISPRCasFinder,CRT,PILER-CR matches to MN694645 (Marine virus AFVG_250M761, complete genome) position: , mismatch: 9, identity: 0.719

aacaggaacaggaaaaaaaagatttgtccggt	CRISPR spacer
tacagtaacaggaaaaaaaggattaatgatgc	Protospacer
 **** *************.**** .*   *.

49. spacer 3.1|953532|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

ccagcctgtagcgtgggggcgttgggtagcct	CRISPR spacer
cggccctgtagcggaggggcgttgggtcccgg	Protospacer
* . ********* .************  *

50. spacer 3.3|953654|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP031397 (Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

51. spacer 3.3|953654|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP019854 (Borreliella burgdorferi plasmid lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

52. spacer 3.3|953654|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP019765 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

53. spacer 3.3|953654|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NC_011784 (Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

54. spacer 3.3|953654|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP017218 (Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

55. spacer 3.3|953654|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NC_013130 (Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

56. spacer 3.3|953654|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NC_013129 (Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

57. spacer 3.3|953654|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NC_001857 (Borreliella burgdorferi B31 plasmid lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

58. spacer 3.5|953776|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP022925 (Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B) position: , mismatch: 9, identity: 0.719

tggccggagcctaaagacggggagccgcgttt	CRISPR spacer
tggccggagccgaaagacggggaac-------	Protospacer
*********** ***********.*

59. spacer 3.12|954203|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP050096 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **

60. spacer 3.12|954203|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP050102 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **

61. spacer 3.12|954203|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP050107 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **

62. spacer 3.12|954203|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP050112 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **

63. spacer 3.12|954203|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP048285 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248a, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **

64. spacer 2.1|936068|31|NZ_CP015923|PILER-CR matches to MT711528 (Escherichia phage vB_EcoS_fTaEco03, complete genome) position: , mismatch: 10, identity: 0.677

ttgcgtatttcgattgtctggacatttcgta	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttac	Protospacer
*****.******** ********... .

65. spacer 2.1|936068|31|NZ_CP015923|PILER-CR matches to MT711525 (Escherichia phage vB_EcoS_fKuEco01, complete genome) position: , mismatch: 10, identity: 0.677

ttgcgtatttcgattgtctggacatttcgta	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttac	Protospacer
*****.******** ********... .

66. spacer 2.1|936068|31|NZ_CP015923|PILER-CR matches to GU196278 (Escherichia phage K1H, complete genome) position: , mismatch: 10, identity: 0.677

ttgcgtatttcgattgtctggacatttcgta	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttac	Protospacer
*****.******** ********... .

67. spacer 2.1|936068|31|NZ_CP015923|PILER-CR matches to NC_027993 (Escherichia phage K1G, complete genome) position: , mismatch: 10, identity: 0.677

ttgcgtatttcgattgtctggacatttcgta	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttac	Protospacer
*****.******** ********... .

68. spacer 2.1|936068|31|NZ_CP015923|PILER-CR matches to MT711527 (Escherichia phage vB_EcoS_fTaEco01, complete genome) position: , mismatch: 10, identity: 0.677

ttgcgtatttcgattgtctggacatttcgta	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttac	Protospacer
*****.******** ********... .

69. spacer 2.6|936251|32|NZ_CP015923|CRISPRCasFinder,CRT matches to LR026976 (Bacillus pumilus isolate 1 genome assembly, plasmid: p576) position: , mismatch: 10, identity: 0.688

cgggccatgttcttttccctctaaaaaatccg	CRISPR spacer
ctctttttgatcttttcactctaaaaaatctc	Protospacer
*   .. ** ******* ************.

70. spacer 2.6|936251|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NC_022882 (Bacillus thuringiensis YBT-1518 plasmid pBMB0233, complete sequence) position: , mismatch: 10, identity: 0.688

cgggccatgttcttttccctctaaaaaatccg	CRISPR spacer
aaacacgagttcttttcgctgtaaaaaatcca	Protospacer
 ..  *. ********* ** **********.

71. spacer 2.15|936830|32|NZ_CP015923|CRISPRCasFinder,CRT,PILER-CR matches to KF751793 (Campylobacter phage CJIE4-1, complete genome) position: , mismatch: 10, identity: 0.688

acgttttaacagggtaatatttacttaattat	CRISPR spacer
ttgcattagcagtgtaatatttacttaaagca	Protospacer
 .*. ***.*** ***************

72. spacer 2.21|937196|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cgttcatcggcagcgtcacgcaatatgaagat	CRISPR spacer
acatcatcggcatcgtcacgccatatccggca	Protospacer
   ********* ******** ****  .*

73. spacer 3.1|953532|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP006373 (Aureimonas sp. AU20 plasmid pAU20f, complete sequence) position: , mismatch: 10, identity: 0.688

ccagcctgtagcgtgggggcgttgggtagcct	CRISPR spacer
gaacgtcttagcgtcggggcgttgggtcgcca	Protospacer
  *  .. ****** ************ ***

74. spacer 3.2|953593|32|NZ_CP015923|CRISPRCasFinder,CRT matches to CP009871 (Pantoea sp. PSNIH2 plasmid pPSP-cd6, complete sequence) position: , mismatch: 10, identity: 0.688

catcttttacgcatgttgatgtgcgttcaaat	CRISPR spacer
ccgattttacgcatgttgctgcgcgttgccgg	Protospacer
*   ************** **.*****   .

75. spacer 3.6|953837|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NC_005262 (Burkholderia cepacia phage Bcep22, complete genome) position: , mismatch: 10, identity: 0.688

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
ctcggtgataacggccttgctgaacgcggtcg	Protospacer
   ********* ****.********* ..

76. spacer 3.6|953837|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP015746 (Shinella sp. HZN7 plasmid pShin-10, complete sequence) position: , mismatch: 10, identity: 0.688

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
cagcccttgaaccgccaggctgaacgctacgc	Protospacer
 .*  .   *******  **************

77. spacer 3.6|953837|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP019446 (Kosakonia cowanii JCM 10956 = DSM 18146 strain 888-76 plasmid p888-76-1, complete sequence) position: , mismatch: 10, identity: 0.688

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
tgatgtgataaccacatcgctgaacgccttca	Protospacer
 *. *********.* ***********. .

78. spacer 3.6|953837|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NZ_CP032923 (Agrobacterium tumefaciens strain 1D1108 plasmid pAt1D1108a, complete sequence) position: , mismatch: 10, identity: 0.688

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
ttcaccggcaaccgcatcgctgtacgctacgc	Protospacer
   . .*..****** ****** *********

79. spacer 3.9|954020|32|NZ_CP015923|CRISPRCasFinder,CRT matches to NC_019957 (Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence) position: , mismatch: 10, identity: 0.688

cattcgctcaatagcggcccgcgtggcggtga	CRISPR spacer
agcgcgctcaatagcggaccgcgcggcaacgg	Protospacer
 .. ************* *****.***...*.

80. spacer 3.13|954264|32|NZ_CP015923|CRISPRCasFinder,CRT matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

aggggcgttccgcagtcggcaagggctgaaaa	CRISPR spacer
tcgggcatcccgcagtcggcaagggtgcggcg	Protospacer
  ****.*.****************.  .. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1118717 : 1124530

Enterobacteria_phage(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000783714.1\|1118717_1121051_-	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	0.0e+00	83.1
WP_000743149.1\|1121065_1121386_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_001216599.1\|1121382_1121610_-	hypothetical protein	NA	NA	NA	NA
WP_000980355.1\|1121606_1122164_-	ash family protein	Q7M2A7	Enterobacteria_phage	9.3e-30	66.7
WP_000556587.1\|1122160_1122427_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
WP_000194694.1\|1122967_1123705_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	3.1e-81	65.3
WP_000984211.1\|1123701_1123947_+	ogr/Delta-like zinc finger family protein	Q7M294	Enterobacteria_phage	6.3e-31	76.5
WP_000210077.1\|1123963_1124530_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	2.9e-55	62.2

DBSCAN-SWA_2

1183541 : 1291839

107

Salmonella_phage(36.21%)

holin,terminase,portal,protease,tail,transposase,tRNA,lysis,integrase

attL 1169179:1169195|attR 1278048:1278064

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1169179:1169195	attL	NA	NA	NA	NA
WP_000183635.1\|1183541_1184222_-\|tRNA	tRNA-uridine aminocarboxypropyltransferase	NA	NA	NA	NA
WP_001098732.1\|1184294_1184714_-	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	1.2e-16	40.6
WP_000997374.1\|1184917_1185955_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_000179978.1\|1186070_1186760_-	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	49.5
WP_000627811.1\|1187078_1187462_+	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
WP_000188410.1\|1187523_1188111_-	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_024133293.1\|1188213_1189113_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000219174.1\|1189130_1190465_-	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.6e-43	29.7
WP_000083347.1\|1190594_1191332_+\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
WP_000989186.1\|1191316_1192939_-	L-aspartate oxidase	NA	NA	NA	NA
WP_014344135.1\|1193202_1193367_+	rpoE leader peptide RseD	NA	NA	NA	NA
WP_000003307.1\|1193363_1193939_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
WP_001168374.1\|1193970_1194621_+	anti-sigma-E factor RseA	NA	NA	NA	NA
WP_000812017.1\|1194620_1195577_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
WP_000589049.1\|1195573_1196053_+	SoxR-reducing system protein RseC	NA	NA	NA	NA
WP_001007939.1\|1196549_1197779_+\|integrase	site-specific integrase	H6WRW7	Salmonella_phage	2.9e-233	94.4
WP_001670787.1\|1197756_1198041_-	excisionase Xis	H6WRW8	Salmonella_phage	3.1e-42	86.2
WP_001237031.1\|1198081_1198321_-	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
WP_077248255.1\|1198363_1199521_-	recombinase RecT	S4TTE8	Salmonella_phage	3.9e-216	99.5
WP_000017125.1\|1199483_1202411_-	PD-(D/E)XK nuclease-like domain-containing protein	S4TNL0	Salmonella_phage	0.0e+00	99.3
WP_001539619.1\|1202537_1202888_-	hypothetical protein	S4TSN6	Salmonella_phage	1.1e-60	97.4
WP_000917562.1\|1202909_1203068_-	hypothetical protein	H6WRX3	Salmonella_phage	9.0e-23	98.1
WP_000950426.1\|1203524_1204187_-	hypothetical protein	NA	NA	NA	NA
WP_000356948.1\|1204186_1204573_-	hypothetical protein	NA	NA	NA	NA
WP_001111772.1\|1204565_1205405_-	AAA family ATPase	A0A1X9IGI7	Lactococcus_phage	1.5e-31	33.3
WP_000660736.1\|1205463_1205859_-	helix-turn-helix domain-containing protein	K7PM35	Enterobacteria_phage	1.9e-37	61.4
WP_000643689.1\|1205958_1206201_+	helix-turn-helix domain-containing protein	A0A0M4QX15	Salmonella_phage	2.1e-23	64.1
WP_010835408.1\|1206160_1206535_+	hypothetical protein	S4TTD7	Salmonella_phage	1.9e-63	98.4
WP_000024044.1\|1206626_1207511_+	replication protein	K7PGT1	Enterobacteria_phage	1.3e-46	47.2
WP_000801764.1\|1207507_1208203_+	hypothetical protein	G8C7U6	Escherichia_phage	2.1e-55	45.4
WP_000664368.1\|1208216_1208915_+	DUF550 domain-containing protein	A0A0M4RTV1	Salmonella_phage	2.1e-63	85.7
WP_000877757.1\|1209022_1209655_+	hypothetical protein	NA	NA	NA	NA
WP_001217669.1\|1209897_1210131_+	DinI family protein	H6WRY5	Salmonella_phage	5.6e-37	100.0
WP_014343878.1\|1210247_1210496_+	hypothetical protein	A0A0U2C0C8	Salmonella_phage	1.6e-42	100.0
WP_000929791.1\|1210530_1211133_+	DUF1367 family protein	S4TTI0	Salmonella_phage	2.8e-109	99.0
WP_001096550.1\|1211341_1211953_+	recombination protein NinG	A0A0M4RU10	Salmonella_phage	1.2e-91	99.0
WP_000801757.1\|1211949_1212090_+	YlcG family protein	A0A0M5M7B2	Salmonella_phage	7.2e-08	78.9
WP_001097241.1\|1212086_1212764_+	antitermination protein	I6PDF8	Cronobacter_phage	7.7e-63	54.0
WP_000211410.1\|1213036_1213600_+	ORF6N domain-containing protein	A0A0P0ZC44	Stx2-converting_phage	7.6e-56	92.2
WP_000657897.1\|1214106_1214295_+	hypothetical protein	NA	NA	NA	NA
WP_001110783.1\|1214509_1215196_-\|protease	type III secretion system effector protease GogA	Q9MBM2	Phage_Gifsy-1	9.4e-133	100.0
WP_001574216.1\|1215471_1215801_+\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
WP_000984581.1\|1215784_1216237_+	lysozyme	A0A0M4R365	Salmonella_phage	5.1e-79	97.3
WP_001533543.1\|1216254_1216707_+\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	2.9e-66	92.7
WP_000669690.1\|1216942_1217344_-	PPC domain-containing protein	NA	NA	NA	NA
WP_001102153.1\|1217630_1218176_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
WP_000623091.1\|1218147_1220079_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	6.3e-259	65.7
WP_000201415.1\|1220062_1220266_+	gpW family protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
WP_000831821.1\|1220262_1221843_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	9.6e-189	62.8
WP_001189503.1\|1221832_1223329_+	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	8.1e-97	52.2
WP_072610223.1\|1225605_1226199_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	1.0e-74	75.4
WP_000479607.1\|1228642_1229038_+\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.3e-30	56.5
WP_010989052.1\|1229034_1229373_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-31	62.4
WP_000372072.1\|1229344_1232440_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	6.1e-280	62.3
WP_000447369.1\|1232442_1232772_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.3e-42	70.4
WP_001152689.1\|1232781_1233480_+\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	5.5e-104	76.3
WP_000662739.1\|1233486_1234224_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.2e-129	85.0
WP_000246126.1\|1234121_1234769_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.1e-89	77.7
WP_000514917.1\|1234830_1238193_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	79.7
WP_000178853.1\|1238231_1238474_+	hypothetical protein	NA	NA	NA	NA
WP_001144691.1\|1238527_1240900_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A0K2FIZ6	Escherichia_phage	1.1e-90	65.6
WP_000593433.1\|1240896_1241721_+	macro domain-containing protein	A0A0M4QWS3	Salmonella_phage	1.2e-145	92.0
WP_000143154.1\|1241710_1242289_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	3.6e-93	88.9
WP_010989049.1\|1242385_1242613_-	phage virulence factor PagK family protein	NA	NA	NA	NA
WP_001738443.1\|1242719_1242932_+	helix-turn-helix domain-containing protein	S4TTF2	Salmonella_phage	3.8e-08	90.6
WP_001526383.1\|1243684_1243804_+\|transposase	transposase	NA	NA	NA	NA
WP_001542312.1\|1244516_1244654_-	hypothetical protein	NA	NA	NA	NA
WP_010989047.1\|1245102_1246596_-	type III secretion effector GogB	Q9MBM1	Phage_Gifsy-1	3.4e-260	100.0
WP_000790154.1\|1247000_1248800_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	7.2e-23	24.9
WP_000002559.1\|1248816_1249791_+	signal peptidase I	NA	NA	NA	NA
WP_001068341.1\|1250064_1250745_+	ribonuclease III	A0A2K9L5P0	Tupanvirus	7.4e-21	31.8
WP_000102230.1\|1250741_1251647_+	GTPase Era	NA	NA	NA	NA
WP_000399384.1\|1251658_1252387_+	DNA repair protein RecO	NA	NA	NA	NA
WP_000818964.1\|1252398_1253130_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_000986043.1\|1253129_1253510_+	holo-ACP synthase	NA	NA	NA	NA
WP_001196290.1\|1253621_1253882_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	1.4e-17	52.3
WP_001022468.1\|1253919_1254846_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	3.0e-09	24.4
WP_001276365.1\|1254961_1256158_+	OFA family MFS transporter	NA	NA	NA	NA
WP_000684036.1\|1256179_1257097_+	oxidoreductase	NA	NA	NA	NA
WP_000995705.1\|1257135_1257984_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_001048531.1\|1258099_1258993_+	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_000361663.1\|1259003_1260365_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_000253558.1\|1260368_1261004_+	phosphatidylglycerophosphatase C	NA	NA	NA	NA
WP_001134566.1\|1261028_1261580_+\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA
WP_000734248.1\|1261630_1263175_-	membrane-bound lytic murein transglycosylase MltF	NA	NA	NA	NA
WP_001667771.1\|1263175_1263406_-	hypothetical protein	NA	NA	NA	NA
WP_000970048.1\|1263430_1267318_+	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	6.1e-128	57.6
WP_001670672.1\|1267822_1269253_+	two component system sensor histidine kinase QseE/GlrK	W8CYF6	Bacillus_phage	2.0e-15	26.1
WP_001054239.1\|1269254_1270019_+	two-component system QseEF-associated lipoprotein QseG	NA	NA	NA	NA
WP_000625591.1\|1270015_1271353_+	two-component system response regulator GlrR	W8CYM9	Bacillus_phage	1.8e-10	29.2
WP_000717694.1\|1271429_1271768_+	nitrogen regulatory protein P-II	NA	NA	NA	NA
WP_000856793.1\|1271816_1273277_-	dipeptide permease DtpD	A0A0P0IY73	Acinetobacter_phage	1.7e-46	28.8
WP_001100652.1\|1273332_1275477_-	lysine decarboxylase CadA	NA	NA	NA	NA
WP_000100008.1\|1275559_1276891_-	cadaverine/lysine antiporter	NA	NA	NA	NA
WP_001187133.1\|1277251_1278793_-	lysine decarboxylation/transport transcriptional activator CadC	NA	NA	NA	NA
1278048:1278064	attR	NA	NA	NA	NA
WP_000883145.1\|1278974_1280165_-	NO-inducible flavohemoprotein	NA	NA	NA	NA
WP_000919176.1\|1280489_1281743_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	7.8e-101	53.2
WP_001173729.1\|1281938_1283078_+	3-phenylpropionate MFS transporter	NA	NA	NA	NA
WP_000982964.1\|1283072_1284350_-	stationary phase inducible protein CsiE	NA	NA	NA	NA
WP_000805728.1\|1284475_1285114_+	DUF1007 family protein	NA	NA	NA	NA
WP_000111025.1\|1285104_1286091_+	nickel/cobalt transporter	NA	NA	NA	NA
WP_000020685.1\|1286091_1287105_-	sulfite reductase subunit C	NA	NA	NA	NA
WP_000017587.1\|1287115_1287934_-	anaerobic sulfite reductase subunit B	NA	NA	NA	NA
WP_000985209.1\|1287937_1288981_-	anaerobic sulfite reductase subunit A	NA	NA	NA	NA
WP_000174944.1\|1289162_1290041_-	alpha/beta hydrolase	A0A1C9C5K3	Heterosigma_akashiwo_virus	3.5e-15	24.7
WP_000553467.1\|1290185_1290989_-	inositol-1-monophosphatase	NA	NA	NA	NA
WP_000940032.1\|1291107_1291839_+\|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	NA	NA	NA	NA

DBSCAN-SWA_3

1708697 : 1717868

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569165.1\|1708697_1709645_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8
WP_000824855.1\|1709628_1710360_+	ABC transporter permease	NA	NA	NA	NA
WP_001261696.1\|1710340_1710448_-	protein YohO	NA	NA	NA	NA
WP_001240418.1\|1710507_1711239_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_000272850.1\|1711461_1713147_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
WP_000598637.1\|1713143_1713863_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000950413.1\|1713909_1714377_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_001265355.1\|1714433_1714964_-	YehR family lipoprotein	NA	NA	NA	NA
WP_000703137.1\|1715135_1715594_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_000195330.1\|1715834_1717868_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_4

1792366 : 1802873

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001111836.1\|1792366_1793770_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	26.5
WP_000981469.1\|1793947_1794841_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_000697840.1\|1795217_1796303_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-102	53.9
WP_001023659.1\|1796302_1797202_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.1e-30	36.0
WP_000857530.1\|1797249_1798128_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.1e-107	64.8
WP_000973714.1\|1798128_1798680_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.0e-52	58.0
WP_000018224.1\|1798685_1799660_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
WP_000648783.1\|1799675_1800449_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_000565902.1\|1800453_1801533_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	1.3e-16	24.5
WP_000126352.1\|1801559_1802873_+	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1

DBSCAN-SWA_5

1899414 : 1906680

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000394197.1\|1899414_1899834_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
WP_000457666.1\|1899836_1901105_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	1.3e-225	91.7
WP_000187976.1\|1901559_1901772_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	5.1e-21	70.0
WP_024131109.1\|1901782_1901971_+	hypothetical protein	NA	NA	NA	NA
WP_001080683.1\|1902228_1903440_-	porin OmpC	Q1MVN1	Enterobacteria_phage	1.3e-108	56.0
WP_000107430.1\|1904089_1904389_+	membrane protein	NA	NA	NA	NA
WP_000377048.1\|1904480_1905176_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.1e-07	27.1
WP_001157313.1\|1905249_1906680_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_6

2668150 : 2710278

Salmonella_phage(17.39%)

holin,tail,lysis,head,plate,integrase

attL 2659799:2659813|attR 2708965:2708979

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2659799:2659813	attL	NA	NA	NA	NA
WP_000143157.1\|2668150_2668735_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	2.8e-85	82.2
WP_000772814.1\|2668734_2670186_-\|tail	tail fiber protein	E5G6P0	Salmonella_phage	1.2e-41	69.6
WP_001181747.1\|2670175_2670778_-	DUF2612 domain-containing protein	A0A2R3UAM9	Myoviridae_environmental_samples	3.3e-33	38.9
WP_001293658.1\|2670779_2672021_-\|plate	baseplate J/gp47 family protein	A0A077KGW9	Edwardsiella_phage	1.2e-101	49.9
WP_001191865.1\|2672017_2672374_-	hypothetical protein	A0A077KCA1	Edwardsiella_phage	1.6e-19	49.1
WP_000068499.1\|2672386_2673064_-	oxidoreductase	A0A077KAY0	Edwardsiella_phage	5.4e-32	36.4
WP_000122818.1\|2673044_2673914_-	hypothetical protein	A0A077KC17	Edwardsiella_phage	9.1e-32	32.7
WP_000890115.1\|2673910_2674213_-	hypothetical protein	A0A077K9U4	Edwardsiella_phage	7.0e-24	49.5
WP_000010345.1\|2674212_2674923_-	hypothetical protein	A0A077KGW3	Edwardsiella_phage	8.5e-28	34.6
WP_000741783.1\|2674919_2677091_-	transglycosylase SLT domain-containing protein	A0A0M4REK7	Salmonella_phage	1.1e-49	67.1
WP_000386822.1\|2677074_2677254_-	hypothetical protein	NA	NA	NA	NA
WP_000101346.1\|2677298_2677703_-	hypothetical protein	H9C0W7	Aeromonas_phage	1.8e-19	44.8
WP_000016413.1\|2677702_2678149_-	hypothetical protein	Q2NPD1	Xanthomonas_phage	4.8e-21	39.7
WP_001122279.1\|2678149_2679634_-	DUF3383 domain-containing protein	A0A077KGV4	Edwardsiella_phage	5.8e-95	40.4
WP_000094503.1\|2679614_2680160_-	hypothetical protein	NA	NA	NA	NA
WP_001048639.1\|2680144_2680510_-	hypothetical protein	A0A077KAW7	Edwardsiella_phage	3.0e-21	40.5
WP_000247615.1\|2680506_2681091_-	hypothetical protein	H9C0W2	Aeromonas_phage	3.2e-17	31.7
WP_000537612.1\|2681084_2681531_-	DUF4054 domain-containing protein	A0A068CGG9	Acinetobacter_phage	1.8e-15	43.1
WP_000829562.1\|2681536_2681884_-	hypothetical protein	A0A1X9SFA9	Acinetobacter_phage	2.1e-08	35.4
WP_001031914.1\|2681887_2682916_-	hypothetical protein	A0A219YBB0	Aeromonas_phage	8.7e-82	48.4
WP_001091402.1\|2682915_2683398_-	hypothetical protein	K4HYQ5	Acinetobacter_phage	5.8e-20	41.2
WP_000587352.1\|2683399_2684746_-	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	1.1e-68	36.5
WP_000552015.1\|2684742_2685432_-\|head	head morphogenesis protein	H9C0V1	Aeromonas_phage	1.0e-57	48.7
WP_000266182.1\|2685472_2686993_-	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	2.6e-106	43.9
WP_001130802.1\|2686992_2688612_-	hypothetical protein	A0A0M5M1R6	Salmonella_phage	1.9e-261	81.2
WP_001118124.1\|2688614_2689244_-	hypothetical protein	A0A0M3ULJ9	Salmonella_phage	1.3e-107	97.6
WP_001288297.1\|2689308_2689722_-	hypothetical protein	NA	NA	NA	NA
WP_001533411.1\|2690022_2690211_-	DUF826 domain-containing protein	NA	NA	NA	NA
WP_086010415.1\|2690368_2690872_-\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	5.8e-55	78.5
WP_001208107.1\|2691189_2691729_-	lysozyme	S5MQK2	Escherichia_phage	5.7e-77	74.1
WP_001533331.1\|2691706_2692009_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_001533418.1\|2692258_2692726_+	DUF2441 domain-containing protein	NA	NA	NA	NA
WP_000690097.1\|2692737_2692956_-	hypothetical protein	NA	NA	NA	NA
WP_000658040.1\|2693109_2693298_-	hypothetical protein	NA	NA	NA	NA
WP_000155182.1\|2693540_2694092_-	ORF6N domain-containing protein	A0A0P0ZDQ5	Stx2-converting_phage	1.3e-55	94.8
WP_000211400.1\|2694354_2694666_-	ORF6N domain-containing protein	A0A0N7C203	Escherichia_phage	6.5e-41	74.4
WP_000639983.1\|2694931_2695486_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	5.7e-64	65.3
WP_000926968.1\|2695482_2695779_-	DUF1364 family protein	K7P7Q1	Enterobacteria_phage	1.6e-36	81.3
WP_000784711.1\|2695760_2695955_-	hypothetical protein	S4TNP0	Salmonella_phage	7.9e-13	61.5
WP_000940757.1\|2695951_2696551_-	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	2.9e-98	83.9
WP_000911593.1\|2696614_2696863_-	hypothetical protein	NA	NA	NA	NA
WP_001597144.1\|2697113_2697269_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.2e-14	84.3
WP_000687967.1\|2697472_2697745_-	hypothetical protein	NA	NA	NA	NA
WP_000533386.1\|2697741_2698137_-	DUF977 family protein	A0A088CBK9	Shigella_phage	3.7e-17	37.0
WP_162010736.1\|2698148_2698691_-	replication protein	A0A0U2JGJ0	Escherichia_phage	2.9e-68	73.9
WP_000729543.1\|2698602_2699610_-	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	5.1e-127	69.3
WP_024159654.1\|2699656_2700151_-	hypothetical protein	NA	NA	NA	NA
WP_001033909.1\|2700137_2700392_-	helix-turn-helix transcriptional regulator	K7PKH4	Enterobacteria_phage	1.2e-16	59.4
WP_001224472.1\|2700488_2700914_+	helix-turn-helix domain-containing protein	K7PH71	Enterobacterial_phage	1.2e-13	56.3
WP_024133274.1\|2701357_2701537_-	hypothetical protein	NA	NA	NA	NA
WP_000613376.1\|2701967_2702252_+	hypothetical protein	K7PGY4	Enterobacteria_phage	5.1e-08	53.2
WP_000023731.1\|2702801_2705492_+	exodeoxyribonuclease VIII	Q9QF34	Lambdoid_phage	1.1e-115	74.9
WP_001126032.1\|2705484_2706315_+	recombination protein RecT	A0A1P8DTF2	Proteus_phage	1.0e-104	72.0
WP_001033922.1\|2706350_2706671_+	hypothetical protein	A0A222YY67	Escherichia_phage	1.8e-33	59.2
WP_000066251.1\|2706663_2706996_+	hypothetical protein	S4TNP2	Salmonella_phage	8.8e-20	81.8
WP_000069466.1\|2706992_2707496_+	hypothetical protein	A0A075B8H2	Enterobacteria_phage	6.0e-36	92.3
WP_000089141.1\|2707545_2707782_+	excisionase	NA	NA	NA	NA
WP_000741322.1\|2707771_2708914_+\|integrase	phage integrase Arm DNA-binding domain-containing protein	O21929	Phage_21	2.0e-172	79.7
WP_000444507.1\|2709027_2710278_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	90.7
2708965:2708979	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2858609 : 2961653

Enterobacteria_phage(30.0%)

holin,terminase,protease,tail,transposase,capsid,lysis,tRNA,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000938188.1\|2858609_2859290_+\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	1.6e-84	72.4
WP_000374046.1\|2859928_2860588_+\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	2.7e-44	52.4
WP_000904446.1\|2860674_2861004_+	sulfurtransferase TusE	NA	NA	NA	NA
WP_000072884.1\|2861000_2861282_-	acylphosphatase	NA	NA	NA	NA
WP_000548081.1\|2861330_2862110_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_000859416.1\|2862135_2862684_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_000140480.1\|2862898_2864110_+	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_000561983.1\|2864167_2864485_+	heat shock protein HspQ	NA	NA	NA	NA
WP_001537782.1\|2864529_2864943_-	CoA-binding protein	NA	NA	NA	NA
WP_000847736.1\|2865116_2865779_+	DUF2057 family protein	NA	NA	NA	NA
WP_000424187.1\|2865873_2866332_+	methylglyoxal synthase	NA	NA	NA	NA
WP_000420505.1\|2866367_2868422_-	DNA helicase IV	A7KV33	Bacillus_phage	8.5e-20	27.6
WP_001261222.1\|2868545_2868992_+	YccF domain-containing protein	NA	NA	NA	NA
WP_000950881.1\|2869010_2871164_+	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_001202375.1\|2871150_2871756_-	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_000288732.1\|2871972_2872482_+	cell division inhibitor SulA	NA	NA	NA	NA
WP_022630818.1\|2872838_2873891_+	porin OmpA	NA	NA	NA	NA
WP_000877172.1\|2873962_2874415_-	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_000156459.1\|2874600_2876361_+\|protease	Lon protease family protein	NA	NA	NA	NA
WP_000227928.1\|2876429_2876948_+	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
WP_001537784.1\|2877047_2877215_-	ribosome modulation factor	NA	NA	NA	NA
WP_000759136.1\|2877470_2878034_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_000433414.1\|2878030_2879671_-	intermembrane transport protein PqiB	NA	NA	NA	NA
WP_000333152.1\|2879675_2880929_-	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA
WP_000053051.1\|2880943_2882851_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	5.4e-53	29.8
WP_001086485.1\|2882863_2884972_-	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
WP_000224076.1\|2885070_2886180_+	YcbX family protein	NA	NA	NA	NA
WP_001220671.1\|2886176_2886719_-	cell division protein ZapC	NA	NA	NA	NA
WP_000193785.1\|2888101_2890714_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	6.3e-20	22.6
WP_000497441.1\|2891140_2891332_+	DinI-like family protein	S4TNM0	Salmonella_phage	6.2e-26	95.2
WP_001525490.1\|2891602_2892289_+	hypothetical protein	NA	NA	NA	NA
WP_010989011.1\|2892273_2892573_+	hypothetical protein	NA	NA	NA	NA
WP_000334547.1\|2892641_2893268_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.4e-66	63.2
WP_001533476.1\|2893915_2894884_-	SPI-2 type III secretion system effector SseI	Q9MBL9	Phage_Gifsy-2	7.9e-194	99.7
WP_000143167.1\|2895359_2895941_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.7e-95	89.5
WP_072610225.1\|2895940_2898379_-\|tail	prophage tail fiber N-terminal domain-containing protein	A0A0K2FIZ6	Escherichia_phage	4.1e-90	63.4
WP_000178853.1\|2898432_2898675_-	hypothetical protein	NA	NA	NA	NA
WP_000514917.1\|2898713_2902076_-	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	79.7
WP_000246126.1\|2902137_2902785_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.1e-89	77.7
WP_000662739.1\|2902682_2903420_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.2e-129	85.0
WP_001152689.1\|2903426_2904125_-\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	5.5e-104	76.3
WP_000447369.1\|2904134_2904464_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.3e-42	70.4
WP_000372072.1\|2904466_2907562_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	6.1e-280	62.3
WP_010989052.1\|2907533_2907872_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-31	62.4
WP_000479607.1\|2907868_2908264_-\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.3e-30	56.5
WP_000971954.1\|2908314_2909061_-	Ig-like domain-containing protein	A0A291AWU6	Escherichia_phage	1.9e-99	76.9
WP_000033885.1\|2909068_2909470_-\|tail	tail protein	Q9G0F3	Phage_Gifsy-1	8.1e-52	100.0
WP_000817263.1\|2909578_2910709_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q9G0F2	Phage_Gifsy-1	9.2e-218	100.0
WP_000677089.1\|2910757_2911336_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.7e-82	80.2
WP_000083294.1\|2911363_2911747_-\|head,tail	head-tail joining protein	A0A0K2FJB7	Enterobacteria_phage	9.2e-29	55.6
WP_000201486.1\|2911757_2912117_-	DNA-packaging protein FI	NA	NA	NA	NA
WP_000522566.1\|2912174_2913203_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.7e-114	61.1
WP_000011260.1\|2913257_2913605_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	9.2e-20	52.7
WP_001189503.1\|2913617_2915114_-	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	8.1e-97	52.2
WP_000201415.1\|2916679_2916883_-	gpW family protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
WP_000623083.1\|2916866_2918798_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.4e-258	65.6
WP_001102152.1\|2918769_2919315_-\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.9e-56	79.9
WP_000669689.1\|2919600_2920002_+	PPC domain-containing protein	NA	NA	NA	NA
WP_001673842.1\|2920190_2920682_-\|lysis	lysis protein	S4TNN7	Salmonella_phage	9.6e-55	74.2
WP_001533556.1\|2921143_2921359_-\|holin	class II holin family protein	A5LH82	Enterobacteria_phage	2.2e-08	47.5
WP_000029436.1\|2921536_2922076_+	DUF2441 domain-containing protein	NA	NA	NA	NA
WP_000690098.1\|2922087_2922306_-	hypothetical protein	NA	NA	NA	NA
WP_000658040.1\|2922459_2922648_-	hypothetical protein	NA	NA	NA	NA
WP_001533567.1\|2923023_2923710_+	PipA/GogA/GtgA family type III secretion system effector	Q9MBM0	Phage_Gifsy-2	1.1e-130	98.2
WP_000764542.1\|2923841_2924639_-	antitermination protein	H6WRZ1	Salmonella_phage	9.8e-150	98.5
WP_024134429.1\|2924628_2924775_-	YlcG family protein	H6WRZ0	Salmonella_phage	4.3e-19	100.0
WP_001096565.1\|2924771_2925413_-	recombination protein NinG	S4TSR3	Salmonella_phage	3.7e-115	98.6
WP_001241015.1\|2925415_2925622_-	hypothetical protein	S4TNP0	Salmonella_phage	1.5e-30	85.3
WP_000929790.1\|2925621_2926224_-	DUF1367 family protein	S4TTI0	Salmonella_phage	7.5e-110	99.5
WP_000911593.1\|2926286_2926535_-	hypothetical protein	NA	NA	NA	NA
WP_001237395.1\|2927223_2929203_-	MBL fold metallo-hydrolase	A0A2P0VMX1	Tetraselmis_virus	1.9e-162	46.3
WP_000529512.1\|2929599_2930730_+	GGDEF domain-containing protein	NA	NA	NA	NA
WP_000089415.1\|2931016_2931412_-	DUF977 family protein	A0A088CBK9	Shigella_phage	9.8e-18	38.8
WP_157872077.1\|2931425_2931968_-	replication protein	A0A0U2JGJ0	Escherichia_phage	7.1e-67	74.8
WP_000729539.1\|2931879_2932887_-	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	1.2e-123	67.8
WP_001533160.1\|2932933_2933428_-	hypothetical protein	NA	NA	NA	NA
WP_001033911.1\|2933414_2933669_-	helix-turn-helix transcriptional regulator	K7PKH4	Enterobacteria_phage	5.3e-17	60.9
WP_001574209.1\|2933767_2934166_+	helix-turn-helix domain-containing protein	K7PH19	Enterobacteria_phage	1.2e-18	56.0
WP_072610226.1\|2934872_2937800_+	PD-(D/E)XK nuclease-like domain-containing protein	S4TNL0	Salmonella_phage	0.0e+00	91.8
WP_001539618.1\|2937762_2938920_+	recombinase RecT	S4TTE8	Salmonella_phage	1.6e-217	100.0
WP_001237031.1\|2938962_2939202_+	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
WP_000065276.1\|2939242_2939491_+	excisionase family protein	S4TND0	Salmonella_phage	4.7e-42	100.0
WP_001262306.1\|2939535_2940828_+	DUF3596 domain-containing protein	S4TSP2	Salmonella_phage	1.0e-252	99.8
WP_000191404.1\|2941022_2942225_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
WP_000893192.1\|2942305_2943739_-	sodium:alanine symporter family protein	NA	NA	NA	NA
WP_000544861.1\|2943984_2945199_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA
WP_000762343.1\|2945515_2945977_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_000117867.1\|2946177_2947578_+\|tRNA	asparagine--tRNA ligase	A0A2K9V902	Bandra_megavirus	4.5e-81	35.8
WP_000462663.1\|2949459_2950650_+	aspartate transaminase	NA	NA	NA	NA
WP_001109471.1\|2950711_2951359_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_000357052.1\|2951386_2951935_-	YcbK family protein	A0A0K1LKR7	Rhodobacter_phage	1.2e-05	33.7
WP_000925891.1\|2952194_2954039_-	L,D-transpeptidase	NA	NA	NA	NA
WP_000572733.1\|2954383_2958850_-	chromosome partition protein MukB	NA	NA	NA	NA
WP_000060027.1\|2958849_2959554_-	chromosome partition protein MukE	NA	NA	NA	NA
WP_001288828.1\|2959534_2960857_-	chromosome partition protein MukF	NA	NA	NA	NA
WP_001154028.1\|2960849_2961653_-\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA

DBSCAN-SWA_8

3012132 : 3019444

Ralstonia_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001531374.1\|3012132_3012510_+	hypothetical protein	A0A077KET4	Ralstonia_phage	1.7e-19	40.2
WP_001117984.1\|3012671_3012869_+	hypothetical protein	NA	NA	NA	NA
WP_000934064.1\|3013081_3015358_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
WP_000520789.1\|3015388_3015709_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
WP_000447499.1\|3016031_3016253_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_000125877.1\|3016382_3018329_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	2.0e-39	43.1
WP_001202482.1\|3018325_3019444_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	8.1e-09	39.8

DBSCAN-SWA_9

3382279 : 3423539

Salmonella_phage(42.86%)

holin,tail,head,integrase

attL 3381971:3382016|attR 3423554:3423599

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3381971:3382016	attL	NA	NA	NA	NA
WP_000108377.1\|3382279_3384169_-	hypothetical protein	S4TVJ1	Salmonella_phage	4.2e-159	50.4
WP_001114045.1\|3384226_3386665_-	hypothetical protein	A0A1B1W274	Salmonella_phage	0.0e+00	66.2
WP_001278433.1\|3386639_3387098_-	C40 family peptidase	A0A1W6DXT0	Salmonella_phage	5.6e-49	60.5
WP_001142699.1\|3387090_3387561_-	hypothetical protein	R9TPR6	Aeromonas_phage	2.1e-59	73.1
WP_001274291.1\|3387560_3388064_-	hypothetical protein	F1C5F0	Cronobacter_phage	1.2e-65	68.9
WP_000046199.1\|3388066_3390580_-\|tail	phage tail length tape measure family protein	A0A173GC04	Salmonella_phage	3.3e-215	63.2
WP_001207359.1\|3390579_3391269_-	hypothetical protein	G0ZNE7	Cronobacter_phage	4.6e-55	52.9
WP_001262462.1\|3391327_3392086_-	immunoglobulin domain-containing protein	F1C5E5	Cronobacter_phage	1.1e-54	63.4
WP_000188851.1\|3392157_3392541_-	hypothetical protein	F1C5E4	Cronobacter_phage	4.6e-36	58.3
WP_000501025.1\|3392537_3392963_-	hypothetical protein	R9TPP7	Aeromonas_phage	2.4e-25	43.3
WP_001276815.1\|3392964_3393321_-	hypothetical protein	G0ZNE2	Cronobacter_phage	9.7e-33	62.4
WP_000968548.1\|3393491_3393767_-	hypothetical protein	NA	NA	NA	NA
WP_000235014.1\|3393766_3394147_-	hypothetical protein	F1C5E2	Cronobacter_phage	1.2e-28	53.2
WP_001229819.1\|3394149_3394377_-	hypothetical protein	NA	NA	NA	NA
WP_000964204.1\|3394387_3395482_-	hypothetical protein	F1C5E1	Cronobacter_phage	7.0e-122	63.4
WP_001029956.1\|3395493_3395922_-	hypothetical protein	F1C5E0	Cronobacter_phage	1.6e-42	61.5
WP_000828206.1\|3395926_3397312_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	1.1e-148	58.5
WP_001027974.1\|3397381_3397891_-	hypothetical protein	NA	NA	NA	NA
WP_024133265.1\|3397931_3398936_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	3.8e-114	68.4
WP_001295004.1\|3398862_3400332_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	5.8e-148	56.8
WP_000801674.1\|3400344_3401817_-	hypothetical protein	A0A1W6JNY3	Morganella_phage	1.5e-252	83.5
WP_000042457.1\|3401816_3402419_-	hypothetical protein	A0A077KBY7	Edwardsiella_phage	3.2e-76	76.6
WP_001280566.1\|3402422_3402641_-	hypothetical protein	NA	NA	NA	NA
WP_001532917.1\|3402903_3403281_-	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	2.8e-14	41.5
WP_001167372.1\|3403277_3403715_-	lysozyme	Q5G8R3	Enterobacteria_phage	2.2e-74	97.9
WP_000738703.1\|3403698_3404025_-\|holin	phage holin, lambda family	Q5G8R5	Enterobacteria_phage	1.7e-52	100.0
WP_000947775.1\|3404249_3404768_-	HNH endonuclease	A0A1V0E5R7	Salmonella_phage	1.2e-58	67.4
WP_001047573.1\|3405103_3405868_-	antitermination protein	Q5G8R6	Enterobacteria_phage	2.5e-142	99.2
WP_000219139.1\|3405864_3406044_-	hypothetical protein	A0A0M4QWY9	Salmonella_phage	2.7e-23	98.3
WP_000149882.1\|3406024_3406228_-	phage NinH family protein	I6RSQ6	Salmonella_phage	7.2e-33	100.0
WP_000036319.1\|3406224_3406449_-	hypothetical protein	I6R0N9	Salmonella_phage	1.8e-37	98.6
WP_001108076.1\|3406445_3407057_-	recombination protein NinG	A0A2H5BFK3	Salmonella_phage	1.1e-95	96.6
WP_000950972.1\|3407049_3407226_-	protein ninF	G9L691	Escherichia_phage	2.2e-25	98.2
WP_001532927.1\|3407218_3407560_-	DUF2591 family protein	Q76H72	Enterobacteria_phage	2.1e-64	100.0
WP_001254224.1\|3407562_3407739_-	NinE family protein	K7PH28	Enterobacteria_phage	5.1e-27	98.3
WP_001250039.1\|3407735_3408146_-	recombination protein NinB	A0A0P0ZCW6	Stx2-converting_phage	2.0e-69	96.3
WP_000238250.1\|3408153_3408360_-	hypothetical protein	K7PMD7	Enterobacterial_phage	6.9e-31	97.1
WP_001248401.1\|3408432_3409809_-	AAA family ATPase	Q76H51	Enterobacteria_phage	1.1e-249	98.0
WP_000067073.1\|3409805_3410621_-	replication protein	A0A075B8J2	Enterobacteria_phage	6.7e-146	95.6
WP_001125981.1\|3410613_3410760_-	DUF2740 family protein	A0A075B8K7	Enterobacteria_phage	1.5e-19	100.0
WP_001103492.1\|3410794_3411076_-	hypothetical protein	Q76H54	Enterobacteria_phage	4.3e-44	100.0
WP_000182204.1\|3411186_3411402_-	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	1.3e-32	100.0
WP_000712403.1\|3411512_3412202_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.3e-126	100.0
WP_001532928.1\|3412365_3413445_+	hypothetical protein	A0A192Y6S0	Salmonella_phage	1.5e-193	100.0
WP_000834172.1\|3413590_3413794_-	hypothetical protein	A0A2H5BFH9	Salmonella_phage	3.3e-25	95.5
WP_000216185.1\|3414172_3414475_+	hypothetical protein	B8K1E6	Salmonella_phage	1.7e-46	94.0
WP_001066178.1\|3414487_3415075_-	superinfection exclusion B family protein	A0A192Y7Z0	Salmonella_phage	7.1e-97	94.3
WP_000159516.1\|3415267_3416251_+	hypothetical protein	Q5G8T6	Enterobacteria_phage	2.9e-74	80.4
WP_000983400.1\|3416461_3416596_+	hypothetical protein	K7PHK2	Enterobacteria_phage	1.4e-08	68.2
WP_001191777.1\|3416580_3416733_+	host cell division inhibitory peptide Kil	NA	NA	NA	NA
WP_000604103.1\|3416817_3417126_+	hypothetical protein	A0A0M3ULC7	Salmonella_phage	3.6e-52	97.0
WP_001532863.1\|3417122_3417944_+	PD-(D/E)XK nuclease-like domain-containing protein	A0A0M5M5Y6	Salmonella_phage	7.2e-156	99.3
WP_000366151.1\|3417943_3418513_+	hypothetical protein	A0A0M4RD07	Salmonella_phage	2.1e-101	100.0
WP_000650384.1\|3418512_3418827_+	hypothetical protein	A0A0M4R304	Salmonella_phage	7.7e-50	99.0
WP_001214774.1\|3418843_3419014_+	DUF2737 family protein	A0A220NQV6	Salmonella_phage	5.1e-24	98.2
WP_000665857.1\|3419010_3419397_+	hypothetical protein	A0A0U2BZT9	Salmonella_phage	1.4e-16	89.6
WP_000065084.1\|3419505_3419865_+	Eaf protein	T1SA95	Salmonella_phage	1.7e-61	94.1
WP_000065098.1\|3419861_3420425_+	ead/Ea22-like family protein	A0A1R3Y5T1	Salmonella_virus	7.7e-24	41.7
WP_000252687.1\|3420424_3420640_+	hypothetical protein	NA	NA	NA	NA
WP_000208020.1\|3420643_3421351_+	DUF551 domain-containing protein	A0A2H4FNA9	Salmonella_phage	4.7e-87	71.4
WP_000509005.1\|3421666_3421933_+	hypothetical protein	A0A1V0E5L9	Salmonella_phage	4.9e-45	96.6
WP_001532862.1\|3422375_3423539_+\|integrase	site-specific integrase	B9UDL9	Salmonella_phage	1.6e-225	99.0
3423554:3423599	attR	NA	NA	NA	NA

DBSCAN-SWA_10

4422565 : 4467340

Burkholderia_phage(36.36%)

tRNA,holin,tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001182219.1\|4422565_4423564_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_001039337.1\|4423651_4424962_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_000416272.1\|4425208_4425724_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_001030592.1\|4425823_4426033_-	CsbD family protein	NA	NA	NA	NA
WP_001575282.1\|4426054_4426168_-	hypothetical protein	NA	NA	NA	NA
WP_001128118.1\|4426164_4427490_-	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_000646079.1\|4427668_4428277_-	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_000002900.1\|4428385_4428754_-	diacylglycerol kinase	NA	NA	NA	NA
WP_000017360.1\|4428924_4431345_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_000455249.1\|4431443_4432316_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_000019231.1\|4432329_4432827_-	chorismate lyase	NA	NA	NA	NA
WP_000782497.1\|4433007_4433925_-	maltose operon protein MalM	NA	NA	NA	NA
WP_000973642.1\|4434088_4435447_-	maltoporin	NA	NA	NA	NA
WP_000179176.1\|4435535_4436645_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
WP_000695414.1\|4437005_4438196_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_000382573.1\|4438327_4439872_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_001252085.1\|4439886_4440777_+	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_000982749.1\|4440942_4441353_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_000750804.1\|4441495_4443592_-	YjbH domain-containing protein	NA	NA	NA	NA
WP_000977968.1\|4443591_4444329_-	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_123220402.1\|4444325_4444994_-	YjbF family lipoprotein	NA	NA	NA	NA
WP_001541297.1\|4445027_4445270_-	outer membrane protein	NA	NA	NA	NA
WP_000790042.1\|4445713_4447363_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_000136394.1\|4447707_4449057_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_000615248.1\|4449187_4449535_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
WP_001226439.1\|4450111_4450399_+\|holin	putative holin	Q6QIC8	Burkholderia_phage	3.0e-16	48.1
WP_001203711.1\|4450401_4451007_+	lytic transglycosylase domain-containing protein	Q5ZQZ1	Pseudomonas_phage	9.3e-60	59.4
WP_000777266.1\|4451019_4451334_+	membrane protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
WP_000449399.1\|4451493_4451949_+	Gp37 family protein	NA	NA	NA	NA
WP_000875314.1\|4451945_4452143_+	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
WP_000729853.1\|4452132_4453560_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.4e-194	70.9
WP_000907494.1\|4453559_4454084_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
WP_001003635.1\|4454135_4454453_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001185654.1\|4454412_4454541_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_001262490.1\|4454637_4456989_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	5.8e-65	30.3
WP_000271425.1\|4456988_4457942_+\|tail	phage tail protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
WP_001269716.1\|4457941_4458151_+\|tail	tail protein X	A4JWL2	Burkholderia_virus	9.8e-17	60.3
WP_000818150.1\|4458138_4459182_+	phage late control D family protein	A4JWL3	Burkholderia_virus	3.8e-77	45.9
WP_000679389.1\|4459191_4459914_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
WP_000593182.1\|4460241_4460604_+	GtrA family protein	I1TED9	Salmonella_phage	1.2e-43	70.8
WP_000703628.1\|4460600_4461530_+	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	7.9e-151	84.1
WP_001095009.1\|4461529_4463077_+	hypothetical protein	B9UDL6	Salmonella_phage	1.5e-48	29.9
WP_001093501.1\|4463240_4463600_+	GPW/gp25 family protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
WP_000951731.1\|4463590_4464706_+\|plate	baseplate J/gp47 family protein	Q6QI99	Burkholderia_phage	9.0e-101	52.0
WP_000359499.1\|4464698_4465331_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.6e-24	56.4
WP_000368203.1\|4465333_4466815_+\|tail	tail fiber protein	A0A0M3ULF6	Salmonella_phage	1.3e-51	51.7
WP_001177097.1\|4466824_4467340_+\|tail	tail fiber assembly protein	A0A0U2QV64	Escherichia_phage	3.4e-34	41.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015923

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection