| NC_017742.1|WP_000583023.1|72628_73141_-|urease-accessory-protein-UreE |
gnl|CDD|237322 |
PRK13261, ureE, urease accessory protein UreE; Provisional.
|
7.82819e-47 |
| NC_017742.1|WP_014662310.1|46107_48360_-|carbamoyltransferase-HypF |
gnl|CDD|272929 |
TIGR00143, Carbamoyltransferase_HypF, [NiFe] hydrogenase maturation protein HypF. A previously described regulatory effect of HypF mutatation is attributable to loss of activity of a regulatory hydrogenase. A zinc finger-like region CXXCX(18)CXXCX(24)CXXCX(18)CXXC region further supported the regulatory hypothesis. However, more recent work (PUBMED:11375153) shows the direct effect is on the activity of expressed hydrogenases with nickel/iron centers, rather than on expression. [Protein fate, Protein modification and repair].
|
0 |
| NC_017742.1|WP_000515263.1|71834_72605_-|urease-accessory-protein-UreF |
gnl|CDD|223900 |
COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones].
|
6.41293e-94 |
| NC_017742.1|WP_000827172.1|48356_49349_-|AguA-family-protein |
gnl|CDD|225505 |
COG2957, COG2957, Peptidylarginine deiminase and related enzymes [Amino acid transport and metabolism].
|
0 |
| NC_017742.1|WP_000238762.1|71206_71806_-|urease-accessory-protein-UreG |
gnl|CDD|129208 |
TIGR00101, Urease_accessory_protein_UreG, urease accessory protein UreG. This model represents UreG, a GTP hydrolase that acts in the assembly of the nickel metallocenter of urease. It is found only in urease-positive species, although some urease-positive species (e.g. Bacillus subtilis) lack this protein. A similar protein, hypB, is an accessory protein for expression of hydrogenase, which also uses nickel. [Central intermediary metabolism, Nitrogen metabolism].
|
1.6612e-140 |
| NC_017742.1|WP_000374110.1|67103_67523_+|SMI1/KNR4-family-protein |
gnl|CDD|214864 |
smart00860, SMI1_KNR4, SMI1 / KNR4 family. Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation.
|
3.77298e-07 |
| NC_017742.1|WP_000961414.1|50076_50634_-|DNA-cytosine-methyltransferase |
gnl|CDD|223348 |
COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair].
|
3.47509e-19 |
| NC_017742.1|WP_001169377.1|56080_59638_-|aldehyde-dehydrogenase-family-protein |
gnl|CDD|143443 |
cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
|
0 |
| NC_017742.1|WP_000852741.1|65646_67134_+|HNH-endonuclease |
gnl|CDD|379604 |
pfam14414, WHH, A nuclease of the HNH/ENDO VII superfamily with conserved WHH. WHH is a predicted nuclease of the HNH/ENDO VII superfamily of the treble clef fold. The name is derived from the conserved motif WHH. It is found in bacterial polymorphic toxin systems and functions as a toxin module. WHH is the shortest version of HNH nuclease families. Like AHH and LHH, the WHH nuclease contains 4 conserved histidines of which the first one is predicted to bind a metal-ion and other three ones are involved in activation of water molecule for hydrolysis.
|
9.01524e-10 |
| NC_017742.1|WP_000614637.1|49400_50099_-|site-specific-DNA-methyltransferase |
gnl|CDD|334588 |
pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.
|
9.21106e-57 |
| NC_017742.1|WP_000898415.1|52050_54525_-|adenine/cytosine-DNA-methyltransferase |
gnl|CDD|223348 |
COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair].
|
3.2165e-63 |
| NC_017742.1|WP_000510306.1|54563_56054_-|sodium/proline-symporter-PutP |
gnl|CDD|273981 |
TIGR02121, Osmoregulated_proline_transporter, sodium/proline symporter. This family consists of the sodium/proline symporter (proline permease) from a number of Gram-negative and Gram-positive bacteria and from the archaeal genus Methanosarcina. Using the related pantothenate permease as an outgroup, candidate sequences from Bifidobacterium longum and several from archaea are found to be outside the clade defined by known proline permeases. These sequences, scoring between 570 and -40, define the range between trusted and noise cutoff scores. [Transport and binding proteins, Amino acids, peptides and amines].
|
0 |
| NC_017742.1|WP_000240553.1|62374_64795_+|hypothetical-protein |
gnl|CDD|212667 |
cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family. HSP70 (70-kDa heat shock protein) family chaperones assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some HSP70 family members are not chaperones but instead, function as NEFs to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle, some may function as both chaperones and NEFs.
|
1.24025e-06 |
| NC_017742.1|WP_001099369.1|70409_71207_-|urease-accessory-protein-UreD |
gnl|CDD|223899 |
COG0829, UreH, Urease accessory protein UreH [Posttranslational modification, protein turnover, chaperones].
|
3.9867e-101 |
| NC_017742.1|WP_000378841.1|45106_46105_-|hydrogenase-expression/formation-protein-HypE |
gnl|CDD|273984 |
TIGR02124, Hydrogenase_expression/formation_protein_HypE, hydrogenase expression/formation protein HypE. This family contains HypE (or HupE), a protein required for expression of catalytically active hydrogenase in many systems. It appears to be an accessory protein involved in maturation rather than a regulatory protein involved in expression. HypE shows considerable homology to the thiamine-monophosphate kinase ThiL (TIGR01379) and other enzymes.
|
2.93486e-176 |
