CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP018018	Kosakonia radicincitans DSM 16656 plasmid pKrDSM16656S, complete sequence	0 crisprs	NA	0	0
NZ_CP018017	Kosakonia radicincitans DSM 16656 plasmid pKrDSM16656L, complete sequence	0 crisprs	DinG	0	20
NZ_CP018016	Kosakonia radicincitans DSM 16656 chromosome, complete genome	2 crisprs	cas3,csa3,DEDDh,DinG	1	16

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 2235

Salmonella_phage(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172745723.1\|705_1191_-	hypothetical protein	NA	NA	NA	NA
WP_007372313.1\|1230_2235_-	peptide transporter	A0A1B0V750	Salmonella_phage	3.0e-18	27.2

DBSCAN-SWA_2

6114 : 6957

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372307.1\|6114_6957_-	HNH endonuclease	G0X580	Salmonella_phage	1.8e-16	39.5

DBSCAN-SWA_3

16153 : 17708

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372289.1\|16153_16771_-	hypothetical protein	A0A076G6Q2	Escherichia_phage	4.1e-63	53.4
WP_007372288.1\|16840_17395_-	hypothetical protein	NA	NA	NA	NA
WP_016241558.1\|17549_17708_-	hypothetical protein	A0A2P1JU39	Erwinia_phage	1.7e-05	58.3

DBSCAN-SWA_4

21457 : 30097

Escherichia_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032155220.1\|21457_21655_-	restriction alleviation protein, Lar family	A0A0U2QQP4	Escherichia_phage	2.6e-11	48.4
WP_007372278.1\|21677_22373_-	hypothetical protein	NA	NA	NA	NA
WP_016241560.1\|22503_22695_-	hypothetical protein	NA	NA	NA	NA
WP_024196081.1\|22876_23272_-	hypothetical protein	NA	NA	NA	NA
WP_007372277.1\|23298_23463_-	hypothetical protein	NA	NA	NA	NA
WP_024196082.1\|23544_23967_-	hypothetical protein	NA	NA	NA	NA
WP_016241561.1\|24054_24375_-	hypothetical protein	NA	NA	NA	NA
WP_016241562.1\|24395_26468_-	ATP-dependent DNA helicase DinG	A0A127AW80	Bacillus_phage	1.7e-44	24.4
WP_007372274.1\|26562_26856_-	hypothetical protein	NA	NA	NA	NA
WP_016241563.1\|26868_27174_-	hypothetical protein	NA	NA	NA	NA
WP_007372272.1\|27328_27601_-	hypothetical protein	A0A192YCJ5	Morganella_phage	1.5e-09	37.2
WP_007372271.1\|27715_27991_-	hypothetical protein	NA	NA	NA	NA
WP_007372270.1\|28065_28542_-	hypothetical protein	NA	NA	NA	NA
WP_007372269.1\|28577_29036_-	hypothetical protein	NA	NA	NA	NA
WP_007372268.1\|29144_29411_-	hypothetical protein	NA	NA	NA	NA
WP_007372267.1\|29503_30097_-	hypothetical protein	J9Q753	Salmonella_phage	1.4e-07	34.5

DBSCAN-SWA_5

53910 : 55031

Leptospira_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085950818.1\|53910_55031_-\|transposase	IS3-like element ISSen4 family transposase	S5WIU1	Leptospira_phage	1.7e-51	42.8

DBSCAN-SWA_6

60444 : 65056

Rhizobium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372241.1\|60444_61524_-	AAA family ATPase	L7TKP0	Rhizobium_phage	3.2e-26	36.4
WP_007372240.1\|61583_61961_-	hypothetical protein	NA	NA	NA	NA
WP_007372239.1\|62332_63442_-	YqaJ viral recombinase family protein	A8HP48	Thalassomonas_phage	7.6e-07	30.1
WP_007372238.1\|63499_65056_-	recombinase RecT	F1C5B8	Cronobacter_phage	6.2e-31	36.4

DBSCAN-SWA_7

89764 : 96348

Pseudomonas_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372217.1\|89764_91240_-	UvrD-helicase domain-containing protein	A0A1S5R1M3	Pseudomonas_phage	6.0e-44	32.6
WP_007372216.1\|91415_91703_+	DUF1294 domain-containing protein	NA	NA	NA	NA
WP_007372215.1\|91751_92087_-	hypothetical protein	NA	NA	NA	NA
WP_016241591.1\|92348_92921_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	2.6e-19	32.7
WP_007372214.1\|92956_93166_-	hypothetical protein	NA	NA	NA	NA
WP_007372213.1\|93707_95036_-	hypothetical protein	NA	NA	NA	NA
WP_007372212.1\|95268_96348_-	restriction endonuclease	A0A1P8CWV0	Bacillus_phage	9.0e-05	23.8

DBSCAN-SWA_8

106218 : 112710

Shigella_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087121881.1\|106218_107365_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.1e-146	92.2
WP_016241518.1\|107518_107944_-	hypothetical protein	NA	NA	NA	NA
WP_099531012.1\|107957_108233_-	hypothetical protein	NA	NA	NA	NA
WP_009652923.1\|108519_108834_-	hypothetical protein	NA	NA	NA	NA
WP_007372199.1\|109697_110660_+	plasmid stabilization protein	A0A222YXF2	Escherichia_phage	9.6e-59	41.1
WP_009652914.1\|110673_111060_+	plasmid stability protein	NA	NA	NA	NA
WP_007372197.1\|111086_111491_-	FCD domain-containing protein	NA	NA	NA	NA
WP_024196074.1\|111525_111855_+	acid-activated periplasmic chaperone HdeB	NA	NA	NA	NA
WP_007372195.1\|111906_112710_-	aquaporin	M1HJ75	Acanthocystis_turfacea_Chlorella_virus	2.1e-14	31.5

DBSCAN-SWA_9

132702 : 145079

Salmonella_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000019445.1\|132702_133683_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
WP_032951328.1\|133728_134121_-	hypothetical protein	NA	NA	NA	NA
WP_009654999.1\|134135_134891_-	hypothetical protein	NA	NA	NA	NA
WP_007372173.1\|135044_136754_-	DUF4942 domain-containing protein	A0A059VA49	Pseudomonas_phage	3.9e-63	31.0
WP_032951326.1\|136945_137530_-	hypothetical protein	NA	NA	NA	NA
WP_107224802.1\|137749_138869_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.1e-50	42.4
WP_007372172.1\|138896_139247_-	hypothetical protein	NA	NA	NA	NA
WP_032951323.1\|139236_139719_-	hypothetical protein	NA	NA	NA	NA
WP_032951321.1\|139816_140245_-	HNH endonuclease	C6ZR29	Salmonella_phage	5.8e-56	75.7
WP_007372169.1\|140263_140749_-	hypothetical protein	NA	NA	NA	NA
WP_007372168.1\|140862_141741_-	hypothetical protein	NA	NA	NA	NA
WP_007372167.1\|141752_142736_-	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	1.1e-73	46.5
WP_007372166.1\|142722_142953_-	hypothetical protein	NA	NA	NA	NA
WP_007372165.1\|142949_143771_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	E5G6L8	Salmonella_phage	3.4e-65	48.9
WP_071532006.1\|143921_145079_-	DNA polymerase III subunit beta	R9TRR6	Rhizobium_phage	1.2e-15	23.5

DBSCAN-SWA_10

155002 : 156073

unidentified_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372151.1\|155002_156073_-	phosphoadenosine phosphosulfate reductase family protein	H7BVI4	unidentified_phage	6.5e-40	28.4

DBSCAN-SWA_11

159478 : 199258

Stx2-converting_phage(23.08%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_107224802.1\|159478_160599_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.1e-50	42.4
WP_008786797.1\|160854_161256_-	hypothetical protein	Q1MVE8	Enterobacteria_phage	3.5e-47	69.9
WP_007372145.1\|161804_162296_+	hypothetical protein	NA	NA	NA	NA
WP_000217395.1\|162381_162873_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001333498.1\|163043_163301_-	helix-turn-helix domain-containing protein	A0A2I7S995	Vibrio_phage	8.3e-18	65.7
WP_127649377.1\|163589_163970_-	hypothetical protein	NA	NA	NA	NA
WP_007372144.1\|164282_165173_-	DNA replication protein	NA	NA	NA	NA
WP_009652912.1\|165322_166588_-	translesion error-prone DNA polymerase V subunit UmuC	A0A1W6JNT0	Morganella_phage	9.8e-144	60.6
WP_008786793.1\|166587_167004_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.0e-36	54.7
WP_007372141.1\|167257_167761_+	hypothetical protein	NA	NA	NA	NA
WP_001567660.1\|168119_169142_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_081120970.1\|171734_172439_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	2.6e-138	99.1
WP_007372135.1\|173384_173552_-	hypothetical protein	A0A0P0ZEB3	Stx2-converting_phage	6.0e-09	89.2
WP_000612626.1\|173600_173948_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_007372134.1\|173944_174349_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	1.6e-68	97.8
WP_007372130.1\|175996_176176_-	hypothetical protein	A0A1B2IAL0	Erwinia_phage	6.8e-11	60.7
WP_007372127.1\|177295_177595_+	propanediol utilization microcompartment protein PduA	NA	NA	NA	NA
WP_007372126.1\|177594_178410_+	propanediol utilization microcompartment protein PduB	NA	NA	NA	NA
WP_035942271.1\|178434_180978_+	glycyl radical protein	NA	NA	NA	NA
WP_035942514.1\|181116_182037_+	glycyl-radical enzyme activating protein	NA	NA	NA	NA
WP_007372122.1\|182071_182899_+	aquaporin	NA	NA	NA	NA
WP_007372121.1\|182970_183261_+	BMC domain-containing protein	NA	NA	NA	NA
WP_007372120.1\|183288_184155_+	BMC domain-containing protein	NA	NA	NA	NA
WP_007372119.1\|184159_184795_+	phosphate propanoyltransferase	NA	NA	NA	NA
WP_050998913.1\|184808_185288_+	microcompartment protein PduM	NA	NA	NA	NA
WP_007372117.1\|185292_185571_+	EutN/CcmL family microcompartment protein	NA	NA	NA	NA
WP_007372116.1\|185603_186113_+	heme-binding protein	NA	NA	NA	NA
WP_007372115.1\|186109_187504_+	aldehyde dehydrogenase EutE	NA	NA	NA	NA
WP_007372114.1\|187519_188632_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_007372113.1\|188991_189852_+	PocR ligand-binding domain-containing protein	NA	NA	NA	NA
WP_172745716.1\|190225_191453_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	3.5e-146	81.7
WP_007372384.1\|191481_191640_-	hypothetical protein	A0A0N7C1X7	Escherichia_phage	3.7e-08	56.0
WP_001300563.1\|193454_194567_-\|transposase	IS4-like element IS421 family transposase	NA	NA	NA	NA
WP_007372383.1\|194647_194851_-	hypothetical protein	NA	NA	NA	NA
WP_001567660.1\|195173_196196_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_007372381.1\|196219_199258_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	9.1e-297	53.8

DBSCAN-SWA_12

206927 : 207632

Escherichia_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067855.1\|206927_207632_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_13

214577 : 221370

Stx2-converting_phage(75.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001201739.1\|214577_214961_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.1e-13	36.3
WP_000609174.1\|214957_215305_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.7e-59	95.7
WP_001000409.1\|215354_216890_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	2.0e-260	87.7
WP_001141269.1\|217455_217731_-	formaldehyde-responsive transcriptional repressor FrmR	NA	NA	NA	NA
WP_000765646.1\|218095_218527_-	DUF488 domain-containing protein	NA	NA	NA	NA
WP_000038427.1\|218718_221370_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	2.1e-156	33.8

DBSCAN-SWA_14

225720 : 229427

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000842119.1\|225720_226830_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	1.8e-32	30.3
WP_001120775.1\|226888_227164_-	formaldehyde-responsive transcriptional repressor FrmR	NA	NA	NA	NA
WP_000103071.1\|227450_229427_+	excinuclease ABC subunit UvrB	A7WKH8	Acidianus_filamentous_virus	7.1e-08	39.0

DBSCAN-SWA_15

240669 : 241497

Clostridium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000981293.1\|240669_241497_+	ParA family protein	J9QE36	Clostridium_phage	2.0e-12	27.4

DBSCAN-SWA_16

244978 : 249106

Macacine_betaherpesvirus(33.33%)

integrase,transposase

attL 233867:233880|attR 258015:258028

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
233867:233880	attL	NA	NA	NA	NA
WP_000174662.1\|244978_245743_+\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	1.9e-25	52.4
WP_007372351.1\|245762_246857_+	hypothetical protein	NA	NA	NA	NA
WP_071532009.1\|246990_247890_+	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|247780_248485_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_050998928.1\|248509_249106_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	1.2e-38	47.1
258015:258028	attR	NA	NA	NA	NA

DBSCAN-SWA_17

254994 : 256608

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372347.1\|254994_256608_-	HNH endonuclease	A0A1S6KZY3	Salmonella_phage	2.2e-07	37.0

DBSCAN-SWA_18

261896 : 268455

Salmonella_phage(75.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008786567.1\|261896_262763_-	hypothetical protein	J9Q7H0	Salmonella_phage	8.4e-46	37.2
WP_016241546.1\|263335_263584_-	hypothetical protein	NA	NA	NA	NA
WP_007372338.1\|264545_265628_+	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	1.1e-79	56.5
WP_007372337.1\|267156_267876_-	HNH endonuclease	G0X580	Salmonella_phage	2.2e-07	39.5
WP_016241550.1\|268029_268455_-	hypothetical protein	A0A0K1YBA5	Cronobacter_phage	1.6e-26	42.8

DBSCAN-SWA_19

274699 : 276539

Salmonella_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372330.1\|274699_274945_-	hypothetical protein	S4TRP7	Salmonella_phage	2.8e-07	44.4
WP_008786574.1\|274993_275653_-	hypothetical protein	NA	NA	NA	NA
WP_007372328.1\|275714_276539_-	hypothetical protein	A6N3G8	Burkholderia_virus	1.9e-18	61.1

DBSCAN-SWA_20

281567 : 288521

Escherichia_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008786580.1\|281567_282986_-	replicative DNA helicase	O80281	Escherichia_phage	4.3e-188	73.6
WP_007372320.1\|282994_283363_-	hypothetical protein	NA	NA	NA	NA
WP_007372319.1\|283359_283881_-	hypothetical protein	NA	NA	NA	NA
WP_007372318.1\|284054_285230_-	ParB/RepB/Spo0J family partition protein	A0A088FQX6	Escherichia_phage	6.5e-17	31.3
WP_016241554.1\|285388_286075_-	hypothetical protein	NA	NA	NA	NA
WP_007372317.1\|286095_286845_-	hypothetical protein	NA	NA	NA	NA
WP_007372316.1\|286846_287164_-	hypothetical protein	NA	NA	NA	NA
WP_172745716.1\|287292_288521_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	3.5e-146	81.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP018016

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018016_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018016_1

3200535-3200653

Orphan

Consensus_repeat	Method
TCCCCGTTTTCAGGGATACCCATCCCCATTTTCGGG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP018016_1

>merge|NZ_CP018016|1|3200535-3200653|PILER-CR
TCCCCGTTTTCAGGGATACCTCTCCCTGTTTTCGGGGATAGTTTTCCCCGTTTTCAGGGATGGTTGATGGTTCATTTTCACTATCCCCGTTTTCAGGGATATCCATCCCCATTTTCGGG

>NZ_CP018016|1|1|3200535-3200653|PILER-CR
TCCCCGTTTTCAGGGATACCTCTCCCTGTTTTCGGG	GATAGTTT
TCCCCGTTTTCAGGGATGGTTGATGGTTCATTTTCA	CTATCCCCGTTTTCAGGGAT
ATCCATCCCCATTTTCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018016.1\|WP_007374672.1\|3203489_3204314_+\|DUF3037-domain-containing-protein	unknown	unknown	gnl\|CDD\|378608
NZ_CP018016.1\|WP_035943366.1\|3202659_3203493_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377920
NZ_CP018016.1\|WP_007374678.1\|3199415_3200153_-\|replication-P-family-protein	unknown	unknown	gnl\|CDD\|369163
NZ_CP018016.1\|WP_145954144.1\|3196901_3199175_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018016.1\|WP_035943365.1\|3204356_3204539_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018016.1\|WP_145954146.1\|3205032_3205326_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018016.1\|WP_145954145.1\|3201895_3202582_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225484
NZ_CP018016.1\|WP_007374680.1\|3195581_3196748_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018016.1\|WP_007374686.1\|3191986_3193048_-\|site-specific-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|223931
NZ_CP018016.1\|WP_007374685.1\|3193197_3193389_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|334770
NZ_CP018016.1\|WP_145954143.1\|3194834_3195431_-\|DUF1367-family-protein	unknown	unknown	gnl\|CDD\|369209
NZ_CP018016.1\|WP_007374668.1\|3205817_3206105_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018016.1\|WP_081120796.1\|3206237_3209171_+\|PD-(D/E)XK-nuclease-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|236615
NZ_CP018016.1\|WP_007374684.1\|3193558_3194245_-\|antitermination-protein	unknown	unknown	gnl\|CDD\|368843
NZ_CP018016.1\|WP_007374687.1\|3191317_3191641_-\|phage-holin,-lambda-family	unknown	unknown	gnl\|CDD\|273709
NZ_CP018016.1\|WP_007374665.1\|3209180_3210260_+\|recombinase-RecT	unknown	unknown	gnl\|CDD\|367688
NZ_CP018016.1\|WP_007374683.1\|3194348_3194642_-\|DUF1364-domain-containing-protein	unknown	unknown	gnl\|CDD\|377777
NZ_CP018016.1\|WP_172745721.1\|3194634_3194835_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018016.1\|WP_007374675.1\|3201560_3201785_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|374243
NZ_CP018016.1\|WP_035943368.1\|3201219_3201540_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|336083

Protein	Function_ID	Function_description	E-value
NZ_CP018016.1\|WP_007374672.1\|3203489_3204314_+\|DUF3037-domain-containing-protein	gnl\|CDD\|378608	pfam11236, DUF3037, Protein of unknown function (DUF3037). This bacterial family of proteins has no known function.	0.000421623
NZ_CP018016.1\|WP_035943366.1\|3202659_3203493_+\|hypothetical-protein	gnl\|CDD\|377920	pfam07804, HipA_C, HipA-like C-terminal domain. The members of this family are similar to a region close to the C-terminus of the HipA protein expressed by various bacterial species. This protein is known to be involved in high-frequency persistence to the lethal effects of inhibition of either DNA or peptidoglycan synthesis. When expressed alone, it is toxic to bacterial cells, but it is usually tightly associated with HipB, and the HipA-HipB complex may be involved in autoregulation of the hip operon. The hip proteins may be involved in cell division control and may interact with cell division genes or their products.	0.00126362
NZ_CP018016.1\|WP_007374678.1\|3199415_3200153_-\|replication-P-family-protein	gnl\|CDD\|369163	pfam06992, Phage_lambda_P, Replication protein P. This family consists of several Bacteriophage lambda replication protein P like proteins. The bacteriophage lambda P protein promoters replication of the phage chromosome by recruiting a key component of the cellular replication machinery to the viral origin. Specifically, P protein delivers one or more molecules of Escherichia coli DnaB helicase to a nucleoprotein structure formed by the lambda O initiator at the lambda replication origin.	9.58831e-78
NZ_CP018016.1\|WP_007374687.1\|3191317_3191641_-\|phage-holin,-lambda-family	gnl\|CDD\|273709	TIGR01594, Uncharacterized_protein_HI_1416, phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions].	1.31277e-34
NZ_CP018016.1\|WP_081120796.1\|3206237_3209171_+\|PD-(D/E)XK-nuclease-like-domain-containing-protein	gnl\|CDD\|236615	PRK09709, PRK09709, exodeoxyribonuclease VIII.	2.85785e-78
NZ_CP018016.1\|WP_145954145.1\|3201895_3202582_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	1.294e-27
NZ_CP018016.1\|WP_007374686.1\|3191986_3193048_-\|site-specific-DNA-methyltransferase	gnl\|CDD\|223931	COG0863, COG0863, DNA modification methylase [DNA replication, recombination, and repair].	3.05546e-22
NZ_CP018016.1\|WP_007374675.1\|3201560_3201785_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|374243	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	1.27107e-22
NZ_CP018016.1\|WP_145954143.1\|3194834_3195431_-\|DUF1367-family-protein	gnl\|CDD\|369209	pfam07105, DUF1367, Protein of unknown function (DUF1367). This family consists of several highly conserved, hypothetical phage proteins of around 200 residues in length. The function of this family is unknown. Some proteins are annotated as IrsA (intracellular response to stress).	3.94519e-110
NZ_CP018016.1\|WP_007374685.1\|3193197_3193389_-\|hypothetical-protein	gnl\|CDD\|334770	pfam01978, TrmB, Sugar-specific transcriptional regulator TrmB. One member of this family, TrmB, has been shown to be a sugar-specific transcriptional regulator of the trehalose/maltose ABC transporter in Thermococcus litoralis.	0.00685396
NZ_CP018016.1\|WP_007374684.1\|3193558_3194245_-\|antitermination-protein	gnl\|CDD\|368843	pfam06323, Phage_antiter_Q, Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Phage 82 gene Q encodes a phage-specific positive regulator of late gene expression, thought, by analogy to the corresponding gene of phage lambda, to be a transcription antiterminator.	3.71289e-106
NZ_CP018016.1\|WP_007374665.1\|3209180_3210260_+\|recombinase-RecT	gnl\|CDD\|367688	pfam03837, RecT, RecT family. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to RecT.	1.78356e-35
NZ_CP018016.1\|WP_007374683.1\|3194348_3194642_-\|DUF1364-domain-containing-protein	gnl\|CDD\|377777	pfam07102, DUF1364, Protein of unknown function (DUF1364). This family consists of several bacterial and phage proteins of around 95 residues in length. The function of this family is unknown.	1.47127e-46
NZ_CP018016.1\|WP_035943368.1\|3201219_3201540_-\|hypothetical-protein	gnl\|CDD\|336083	pfam05269, Phage_CII, Bacteriophage CII protein. This family consists of several phage CII regulatory proteins. CII plays a key role in the lysis-lysogeny decision in bacteriophage lambda and related phages.	9.7238e-05

>NZ_CP018016.1|WP_007374678.1|3199415_3200153_-|replication-P-family-protein
MKNISEQIHNLDRENFRRVAHGLPEVQDDNAPVRQQQVAEVFNSLFSQLRATFPAAIANFRTQDEFDEFRRQWLLAFSENGITTLAQVAAGMRVARQQEKPFLPSPGQFVAWCRAEECAAVGLPDQAALMDLFYRYCRTRGSYPDAESFPWPGKIDGKNTSQSSANYWIVTTLYQQMLASGLSDAEVRRKAGEELAAMALRIRRGEELPEPIARLPVMGRKPLSREQNMSKVKEIRMKFGFKGGN
>NZ_CP018016.1|WP_145954144.1|3196901_3199175_-|hypothetical-protein
MITSRFRLALEQLKRSDWETFERLASIFLASEFSSIRTVASASGDDGRDAELFSPEGEPTVMIQYSVTEGWKNKVRETLKRLRETRPNTQILIYLTNQEIGAKADDLKIAARKSGISLDVRDKNWFLERVLGNDAREKAAEELAILKVDPLLASKGLTDKKSSELSQDEAVTAATFLALQWQDDNRDKGLTKLAFEALVRASLIDTDTENRMKRCDIHSKIHQFLPSHPAEVVSKYIDSALRRLTKKTIKHWESLDEFCLAHEEIVRYKEFRARSILSESTLLEAMRHIMDNIKSMYKSIPIENEDLIIKTLRNISQKVLLERSQAFALAVQSGSLSELADNDFTTVIINELNDVKLPRIKELDWIQVMRTGVRMILTSNNGVIQEYLRSLSDSFTLLAFLKKTPDVQKVVEKMFSTGNIWLDTTIVLPLIADTLLDEYDSDVGRFTRMIDAARDVGFKLYVTPGVVEEIERHMNRAKTCAQMINGKWQGSVPFLLERFIVSGRSRASFAQWLENFRGDVRPLEDISIYLSEVFKINIRSLEDESQNASHELRHALEQIWGERYKHRQEKYGAVLDDMAVARLIAHDVECYSGVIGLRNKQASSPFGYNEWWLTVDKQAFDLKEKLKTRMSDRVPDSPVMSADFMVNYLAFGPSRRKVDKNKESHLPVLMIMGNTSYLTPELLKEAERLREQYSEMPERIIRRHVRDYLDGAKSKIGPVSHLGLNGKELDEIDESLQLASPSINVIDKQFYNSNSKI
>NZ_CP018016.1|WP_007374680.1|3195581_3196748_+|hypothetical-protein
MAFWNESDNIEINKITTYLEREFPNQDYEKYILSEIDDNTFIDATLIKSWSHFQYLFKFELDNLNEFTPFNQKHLQNRAKPTLDILKTDKEHFLSYLMRVIHEYYFWNPVREELPDIISSDILTRLSSLTKKKSYTAQFSWIENSMATAITRDLINSEDFISIRAIAKDVANYKKIITSHKEKSTTEYIETVKNLSETLEESIEKTNSTKSELADYDAKLEGYKAKYNFVLLSKSFNNLHIRKSEELNKAKKLTWRFTMALALPPSFAFFNHIYNWFPSGEGFSSLSFYLPILTFEILIFYFMRLYYSEVRALNTQLLQIDHRLSLCEFIHDYIEKKNADKDNKESWDLFESLIFSPIQITPDNIPSVLDGANAVAELAGKVMAKSKP
>NZ_CP018016.1|WP_145954143.1|3194834_3195431_-|DUF1367-family-protein
MMAQLQLINHSGILIPATPETRDFLHSKCKLGAVLSADIKLVRNPAFHRRFFALLNLGFEYWEPTGGAISSNERRLVTGYAKFLASYGGNEAALMDAAEQYLAQVANRRITNGISLCKSFDAYRAWVTVEAGHYDAIELPDGTLRKHPRSIAFGNMDETEFQQLYKSALDVLWRWILSSSFSSQQEAENAASQLMSFA
>NZ_CP018016.1|WP_172745721.1|3194634_3194835_-|hypothetical-protein
MMTRKSWFQHTECSTQQADELVEQYRRRGVEVERSLNPDLITWTVSARLPEQRNGKRGRPWGGRLG
>NZ_CP018016.1|WP_007374683.1|3194348_3194642_-|DUF1364-domain-containing-protein
MADLRKAARGRECTVRIPGICNGNPETSVLAHYRLAGTCGTGIKPDDTQAAIACSCCHDVIDGRVQTEYSRDELRLMHAEGVMRTLAIWKKGGLVKT
>NZ_CP018016.1|WP_007374684.1|3193558_3194245_-|antitermination-protein
MTANLSYIRQQLITAMADLSGATKGQLLAWLENAQFDTNTYRRKKPRIYDEETEKWITLLNPPIQGRQSLAKGSSIALVKPVEFATASWRRAVLSVEEHQKAWLLWNYGENIRFEYQVEITRWAWTEFTVQLDGKKIAGKTLGRLRALIWLAAQDVKSELAGSAVYQYKDLALLVGVEEKNWSKTFTAHWLAMRTIFLRLDQASLLSLSKTRSKQMATNYQHSVAKVD
>NZ_CP018016.1|WP_007374685.1|3193197_3193389_-|hypothetical-protein
MLKQQDMTETARAVLSALTLSPATAGEVAEAVHISHERCQLILTQLVMAGLSHYQFGYYKRLQ
>NZ_CP018016.1|WP_007374686.1|3191986_3193048_-|site-specific-DNA-methyltransferase
MKNTVKISSIELINADCLHYIQTLPDNSIDLIVTDPPYFKVKPNGWDNQWKGDEDYLKWLDGCLAQFWRVLKPSGSIYLFCGHRLAADIELMMRRRFSVLNHIIWAKPSGRWNGCNKESLRAYFPATERVLFAEHYLGPYRPKDDGYERKGTELKQSLMAPLIEYFQGARASLGVTSKEISAATGKKNMVSHWFGSSQWQLPGEADYQKLQALFTRIATEKHQRSELIQPHHQLVATYHSLNRKYCELVDEYKSLRRHFAVTAAVPYTDVWTYKPVQFYPGKHSCEKPADMLRDIINASSRPGDILADFFMGSGSMIKEALALGRSAIGVELETDRFNQTVSEVSAQASRDAE
>NZ_CP018016.1|WP_007374687.1|3191317_3191641_-|phage-holin,-lambda-family
MKMPYKQDFIAALLAAKEQGIGAMLAFAMAYLRGRYNGGPIMKTLIDATMCAMIAWFARDLLDFFGLAKNLSYIASVFIGYVGTDFIGGFIKRFAARKAGGDDANQQ
>NZ_CP018016.1|WP_035943368.1|3201219_3201540_-|hypothetical-protein
MHNAIARKLEPPILKPLEIESILLNRLASVGQKNYAEQIGISESTVSKRKADSHFSEMARELSALGLQVVPPEAVVVSRDYLTSVETLADIGLRAERARPGPLGWD
>NZ_CP018016.1|WP_007374675.1|3201560_3201785_-|helix-turn-helix-domain-containing-protein
MNLVIQRALQIVGSQKRLADICDVSQPAVHKWLNGGSVSPEKVNAIVKATNGEIKAHEIRPDLPELFPHPDNAA
>NZ_CP018016.1|WP_145954145.1|3201895_3202582_+|helix-turn-helix-domain-containing-protein
MKTFSERLSAAMTAAGLSQAQLAELVGVSQPAVQKMASGKTNGSRKMVELSHALGVRPEWLSTGSGPMRHDGQQSAEPPVHRGDIYRLEVLNLSVSAGPGVVNSEFIEVLRSMEYAPEDARMMFDGRKADQIRIINVRGDSMSGTIEPGDLLFVDISVKNFDGDGIYAFLYDDTAHVKRLQKMKDKLLVISDNKIYSPWDPIEKDEMNRVLIFGKVIGSMPQTYRKHG
>NZ_CP018016.1|WP_035943366.1|3202659_3203493_+|hypothetical-protein
MLNNNPSEDGRQSPTEPQPLFGLEIEEWTPPNGSTGHLRSFAIANDGLEYAIKSLEDGQASSLNVYSPELVPAAEWFCSKLAEACGLPSPPCRILLEPVSNQYVFGSRIDLAAYRGALEIPQWRNLLVNSNVQMRKQLWSIYAFDQFIYNVDRHINNYLYVTNRQQSVAIQAFDFSMSGLAMGWPNRTGVLLLPEDSKTTLVWSIIKAVIGSDPEYHKSAENLLSKLSSMDISIIQGILNAMPDTWLPVLRRDALLTWWDSEEKQDRIDIIDKEVKS
>NZ_CP018016.1|WP_007374672.1|3203489_3204314_+|DUF3037-domain-containing-protein
MNKFSFSIIKLISDPIRAETINVGVLVETEHGLDIRLLKTEQKIKAVSENFNLSLIEDFTSEIEWLYDLTPDIKTLSKLFKTGSIQLSEPGMFVLREQTAYDKKVELLMKEYVQPCFSSERTKQNKRIITELKQEFSRAGILGKTHDDLWNHRVVYNFPIAEDEGIYAELLLKNGAYHLTETLDLRGDSTKQKMGDSALKAITISKAKNVFDGKVSSFVVYAANCLSEEKAGLRQLNLIEGYADNVFNLLSEQDMAKYFDHMFTAAGKSLKFTN
>NZ_CP018016.1|WP_035943365.1|3204356_3204539_-|hypothetical-protein
MRLLKGLLFVFGVMLLGASFKLEQGGDSPFGAFVCYGFFAGSVMIGWSEVKAFVRELGGK
>NZ_CP018016.1|WP_145954146.1|3205032_3205326_-|hypothetical-protein
MKSVTKPCPICGEAATSFKHVSKVVNISGNQPTIREVPSVVYVCDEHGWFMLSEQINDFVITSTDPSVKKRLAELVKVRFVPEQEQPLSLKAIESLD
>NZ_CP018016.1|WP_007374668.1|3205817_3206105_+|hypothetical-protein
MQIITAQTEIKVINQDVALFNCEKKVSGVIHTPSSKEVTVILDGGYVLGKFDCAHCAVKAIALLALSISDADKAMFGSYRNYKREFTERVLQQVH
>NZ_CP018016.1|WP_081120796.1|3206237_3209171_+|PD-(D/E)XK-nuclease-like-domain-containing-protein
MEFFYLIKATQKSGKPSAVVWFSAKTEARAKLQVQVILEDNEIATGRGHDYQLPVLTNFPVVDDLPAEEAIDFTWCDRYSLTDDGRTWLKITSQATTDTQDTESTEGAVNEAADPVSSPAETSPLQTNTHSDVTEDDDENTLYPVVKLRLPQRIIAQYLSDKMRHHVTQSQRVEIGAMEMDSDNNHVQNLLLAARNIPGIDNLTTHELWKLTSAIKSVFPEEKRHELAVMVQFILAWSDTHHIDRGLLVKEWAAGKRIPAIQRTDTGTNAGGGNATDRNPDYEHTLDTLDIEIAAATMPMDFDIYNIPGSVHRRAKDIVAAKESPFKEWSAALRKTPGILDFSRAAIFALIRSATENVHHFPVSLQTYINANLTEHQHDKPTDETLAAARQIDSAAVVAGVIQGAEPVESLDKLATEFAVVGKAAAEATRASVSETTGQPEVKKLGGGMFSIDGLIGNTTQTNVQENAEDVQMEKTFQIEDQNTAALPGGESVDLAGTQTDTLSTHDIMAAAAPLMAAAVAGPESTQPLQDEVQQHAADATPEPEYPAFFEPGRYEGLPNNVYHAANGISSTQVKDARVSLMYFNARHVAKTIAREQSKVLDMGNLVHALALQPENLLAEFSIEPEIPKGAFTTTATIRAFIDEYNAGLPPQLSTDDIKALLETHNATLPAQLPLGTSVDETGQSYMSLPAEYQRIEEGQKQTATAMKACIKEYNATLPAPVKTSGSRDTLLEQLALIHPNLVAQEAQKPAPLKVSGQKADLIQAVKSVNPDAVFADELLDAWRENPEDKILVTRQQMATATAIQSALLAHPTAGKFLTHPGRAVEVSYFGFDDETGLEIRVRPDLEIDMGGIRVGVDLKTISMWNVKQPALRAKLHREIIDRDYHLSAAMYMNTAALDQFFWIFVNKDEGYHWIAIVEASPELIELGALEYQTTMRAIANAFDTGEWPAPVTEDYADELTDYDLRRLESLRALANA
>NZ_CP018016.1|WP_007374665.1|3209180_3210260_+|recombinase-RecT
MENTNVAVTDQSAIVNSNIALFDSQYLNAISAFAQMMSQGAATVPRHLQGNAADCMAVAMQAAQWQMNPFAVAQKTHLINGVLGYEAQLVNAVISRSGVLASRFEYEWYGPWEKVIGRFNIKKGEKGEYRVPGWSMADEEGIGIIIRARLKGEEQYRELDLLLAQARVRNSTLWADDPRQQLAYLAVKRWARLFCPDVILGVYTPDELEDRQERVINPDPAPRVSVQEITESEPQNQTVIDNTDGQETKAEAFRARIDAAETLEAATAVGNQINEAKAALGTALFTELKNKATRRYHLVNNRNKVEAAINSLPSPGEPGAAEQFAAVERTLSAAKRHLGDDLYEKYSITLTDMKPEYVG

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Crispr_ID: NZ_CP018016_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018016_2

5289479-5289644

Orphan

Consensus_repeat	Method
GACTGAGTCCGGATTCCGGACTC	CRT

3 spacers

The CRISPR arrays of NZ_CP018016_2

>merge|NZ_CP018016|2|5289479-5289644|CRT
GTTACAGTCCGGATTCCGGACTCCGGTGTAAGTCGTTGATTTCAGACTGAGTCCTGATTCCGGACTCTGTGTTTTATCCACTGACGGGGTACTGAGTCCGTTTTCCGGACTCAGTGATTCCGGGATGTTTTTGGTGCTTTTTTGACTGAGTCCGGATTCCGGACTC

>NZ_CP018016|2|1|5289479-5289644|CRT
GTTACAGTCCGGATTCCGGACTC	CGGTGTAAGTCGTTGATTTCA
GACTGAGTCCTGATTCCGGACTC	TGTGTTTTATCCACTGACGGGG
TACTGAGTCCGTTTTCCGGACTC	AGTGATTCCGGGATGTTTTTGGTGCTTTTTT
GACTGAGTCCGGATTCCGGACTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018016.1\|WP_007372584.1\|5283913_5284198_-\|DUF1778-domain-containing-protein	unknown	unknown	gnl\|CDD\|226860
NZ_CP018016.1\|WP_007372563.1\|5302620_5303595_-\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|225132
NZ_CP018016.1\|WP_007372572.1\|5292266_5293973_-\|ParB-family-protein	unknown	unknown	gnl\|CDD\|213858
NZ_CP018016.1\|WP_035943483.1\|5295333_5296218_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|224113
NZ_CP018016.1\|WP_007372562.1\|5303599_5304385_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270421
NZ_CP018016.1\|WP_007372585.1\|5283440_5283923_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP018016.1\|WP_007372575.1\|5290599_5291199_-\|DUF2857-domain-containing-protein	unknown	unknown	gnl\|CDD\|378591
NZ_CP018016.1\|WP_007372586.1\|5281921_5283208_-\|TcpQ-domain-containing-protein	unknown	unknown	gnl\|CDD\|163460
NZ_CP018016.1\|WP_007372576.1\|5290369_5290600_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018016.1\|WP_007372573.1\|5292016_5292274_-\|TraR/DksA-C4-type-zinc-finger-protein	unknown	unknown	gnl\|CDD\|222775
NZ_CP018016.1\|WP_007372587.1\|5281476_5281920_-\|type-IV-pilus-biogenesis-protein-PilM	unknown	unknown	gnl\|CDD\|369356
NZ_CP018016.1\|WP_007372582.1\|5284929_5285421_-\|DUF3577-domain-containing-protein	unknown	unknown	gnl\|CDD\|371899
NZ_CP018016.1\|WP_074169179.1\|5278500_5279715_-\|type-4b-pilus-protein-PilO2	unknown	unknown	gnl\|CDD\|369114
NZ_CP018016.1\|WP_007372564.1\|5301795_5302608_-\|ribokinase	unknown	unknown	gnl\|CDD\|238915
NZ_CP018016.1\|WP_007372574.1\|5291283_5292027_-\|DUF2786-domain-containing-protein	unknown	unknown	gnl\|CDD\|378525
NZ_CP018016.1\|WP_007372571.1\|5293969_5295334_-\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP018016.1\|WP_007372579.1\|5288083_5288806_-\|TIGR03761-family-integrating-conjugative-element-protein	unknown	unknown	gnl\|CDD\|274771
NZ_CP018016.1\|WP_007372588.1\|5279783_5281457_-\|PilN-family-type-IVB-pilus-formation-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274177
NZ_CP018016.1\|WP_007372583.1\|5284353_5284854_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|236362
NZ_CP018016.1\|WP_007372580.1\|5286053_5288066_-\|DNA-topoisomerase-III	unknown	unknown	gnl\|CDD\|236078

Protein	Function_ID	Function_description	E-value
NZ_CP018016.1\|WP_007372584.1\|5283913_5284198_-\|DUF1778-domain-containing-protein	gnl\|CDD\|226860	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown].	5.96838e-20
NZ_CP018016.1\|WP_007372563.1\|5302620_5303595_-\|SIS-domain-containing-protein	gnl\|CDD\|225132	COG2222, AgaS, Predicted phosphosugar isomerases [Cell envelope biogenesis, outer membrane].	5.86277e-78
NZ_CP018016.1\|WP_007372572.1\|5292266_5293973_-\|ParB-family-protein	gnl\|CDD\|213858	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein. Members of this protein family carry the ParB-type nuclease domain and are found in integrating conjugative elements (ICE) in the same class as PFGI-1 of Pseudomonas fluorescens Pf-5.	2.01578e-142
NZ_CP018016.1\|WP_007372562.1\|5303599_5304385_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270421	cd13703, PBP2_HisJ_LAO, Substrate binding domain of ABC-type histidine- and lysine/arginine/ornithine transporters; the type 2 periplasmic-binding protein fold. This subgroup includes the periplasmic-binding proteins, HisJ and LAO, that serve as initial receptors in the ABC transport of histidine and lysine-arginine-ornithine amino acids. They are belong to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.12921e-124
NZ_CP018016.1\|WP_007372585.1\|5283440_5283923_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	0.00382623
NZ_CP018016.1\|WP_007372575.1\|5290599_5291199_-\|DUF2857-domain-containing-protein	gnl\|CDD\|378591	pfam11198, DUF2857, Protein of unknown function (DUF2857). This is a bacterial family of uncharacterized proteins.	3.09237e-67
NZ_CP018016.1\|WP_007372586.1\|5281921_5283208_-\|TcpQ-domain-containing-protein	gnl\|CDD\|163460	TIGR03748, conj_PilL, conjugative transfer region protein, TIGR03748 family. This model describes the conserved N-terminal region of a variable length protein family associated with laterally transfered regions flanked by markers of conjugative plasmid integration and/or transposition. Most members of the family have the lipoprotein signal peptide motif. A member of the family from a pathogenicity island in Salmonella enterica serovar Dublin strain was designated PilL for nomenclature consistency with a neighboring gene for the pilin structural protein PilS. However, the species distribution of this protein family tracks much better with markers of conjugal transfer than with markers of PilS-like pilin structure. [Mobile and extrachromosomal element functions, Plasmid functions].	6.59331e-55
NZ_CP018016.1\|WP_035943483.1\|5295333_5296218_-\|AAA-family-ATPase	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	5.20467e-20
NZ_CP018016.1\|WP_007372573.1\|5292016_5292274_-\|TraR/DksA-C4-type-zinc-finger-protein	gnl\|CDD\|222775	PHA00080, PHA00080, DksA-like zinc finger domain containing protein.	6.17926e-12
NZ_CP018016.1\|WP_007372587.1\|5281476_5281920_-\|type-IV-pilus-biogenesis-protein-PilM	gnl\|CDD\|369356	pfam07419, PilM, PilM. This family contains the bacterial protein PilM (approximately 150 residues long). PilM is an inner membrane protein that has been predicted to function as a component of the pilin transport apparatus and thin-pilus basal body.	1.81612e-24
NZ_CP018016.1\|WP_007372582.1\|5284929_5285421_-\|DUF3577-domain-containing-protein	gnl\|CDD\|371899	pfam12101, DUF3577, Protein of unknown function (DUF3577). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 143 to 307 amino acids in length.	1.92784e-61
NZ_CP018016.1\|WP_074169179.1\|5278500_5279715_-\|type-4b-pilus-protein-PilO2	gnl\|CDD\|369114	pfam06864, PAP_PilO, Pilin accessory protein (PilO). This family consists of several enterobacterial PilO proteins. The function of PilO is unknown although it has been suggested that it is a cytoplasmic protein in the absence of other Pil proteins, but PilO protein is translocated to the outer membrane in the presence of other Pil proteins. Alternatively, PilO protein may form a complex with other Pil protein(s). PilO has been predicted to function as a component of the pilin transport apparatus and thin-pilus basal body. This family does not seem to be related to pfam04350.	9.9978e-55
NZ_CP018016.1\|WP_007372564.1\|5301795_5302608_-\|ribokinase	gnl\|CDD\|238915	cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like. Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown.	1.90791e-87
NZ_CP018016.1\|WP_007372574.1\|5291283_5292027_-\|DUF2786-domain-containing-protein	gnl\|CDD\|378525	pfam10979, DUF2786, Protein of unknown function (DUF2786). This family of proteins has no known function.	3.71702e-10
NZ_CP018016.1\|WP_007372571.1\|5293969_5295334_-\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP018016.1\|WP_007372579.1\|5288083_5288806_-\|TIGR03761-family-integrating-conjugative-element-protein	gnl\|CDD\|274771	TIGR03761, ICE_PFL4669, integrating conjugative element protein, PFL_4669 family. Members of this protein family, such as PFL4669, are found in integrating conjugative elements (ICE) of the PFGI-1 class as in Pseudomonas fluorescens.	1.95706e-90
NZ_CP018016.1\|WP_007372588.1\|5279783_5281457_-\|PilN-family-type-IVB-pilus-formation-outer-membrane-protein	gnl\|CDD\|274177	TIGR02520, putative_Type_IV_pilus_protein, type IVB pilus formation outer membrane protein, R64 PilN family. Several related protein families encode outer membrane pore proteins for type II secretion, type III secretion, and type IV pilus formation. This protein family appears to encode a secretin for pilus formation, although it is quite different from PilQ. Members include the PilN lipoprotein of the plasmid R64 thin pilus, a type IV pilus. Scoring between the trusted and noise cutoffs are examples of bundle-forming pilus B (bfpB). [Cell envelope, Surface structures, Protein fate, Protein and peptide secretion and trafficking].	4.10371e-122
NZ_CP018016.1\|WP_007372583.1\|5284353_5284854_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|236362	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional.	5.62478e-91
NZ_CP018016.1\|WP_007372580.1\|5286053_5288066_-\|DNA-topoisomerase-III	gnl\|CDD\|236078	PRK07726, PRK07726, DNA topoisomerase 3.	0

>NZ_CP018016.1|WP_007372579.1|5288083_5288806_-|TIGR03761-family-integrating-conjugative-element-protein
MADKQVTKTGSLQSEMTIALHTNYAIGLWLGRKREKQEDNTPVKHGIIGMPQFFVRATLINQDSLNNNPWADEAMYRLEEKLRSATETMTGLIKQLDEEMSMLPTGITLTEVTSVEPLDIHVFTRTPLGYRCVFLLVGFDQFAKKVLQASHYGLITRNGRDNYLSEGGRLLRQIYGTVLSYRRVDATRLDAAENNEVWQKACQEAGEPDRAVLLGEKRSAFSPPVNEASVNLLRLRYQTV
>NZ_CP018016.1|WP_007372580.1|5286053_5288066_-|DNA-topoisomerase-III
MRLYICEKPSQGRDLAGVLGATRRGDGFLTGSGVTVTWAVGHLLETAPPEAYGQQFGKPWSLSALPILPAPWQVVVKKETQDQFKVIERLLRQVDDVVIATDADREGEVIARELLEYCRWEGPVQRLWLSALDELSIRAALQDLRPGQATLGMYHAGLGRARADWLIGMNLSRLYTLRAAEAGFDGVVSVGRVQTPTLALVVRRDREIAAFVPKPFWQVKALISAGGLTFPAQWVPAKVYTDEEKRCVHQNIAQQVAQLCRQAGHAVVTESDTKREKAAAPLAFSQGTLQQACGRLWDMSPQQVLDTAQSLYEKHKATTYPRTDCGYLPESMREEISGVLDAIGRTDPECAPVLARLDRTFVSRIWNDKKITAHHGIIPTRNAFQLSALTETERNVYMLIRRNYLAQFLPLHESDFTRLQFDIGGQLFRATGRTEVIKGWKVLFENAGDNEVDDGDEADVALPPLAQNDRCAVTGAEVVQLMTRPPAHYTFATLIGAMMNAAAFVTDVALRKVLKDNAGLGTEATRAGIVEQLLNRHFIVRKGSKIMATELGADVIDALPPQLTEPGMTALWEQALDEVAAGRMSLDDFLQRQAGWTRNLVSQGTQQQVRIRIPPTPACPLCGGKTRLRRGEKGEFWSCQHYPECKGVINIGGTRKKRPRRAKSPESKKN
>NZ_CP018016.1|WP_007372582.1|5284929_5285421_-|DUF3577-domain-containing-protein
MTATTTTPASTGSASASQKKEFFNLNVNGIGYLSSIRRVQGGNGEFTCAVINALTGPTDNASYTRFDVTIAGAETTKLINRCQKAVDEEEKVLIGFVLSGLKADVFTLQTGDHAGESRPSLKARLIKVEFIKKGQDVVYQAPNASQTPESGSSAQKEYDPNSF
>NZ_CP018016.1|WP_007372583.1|5284353_5284854_-|single-stranded-DNA-binding-protein
MSARGVNKVILVGHLGQDPEVRYMPDSTAVTTLSVATSETWRDKQTGENRENTEWHRVVLFGKLAEVAGEYLRKGSQVYIEGQLRTRKWTDTNGIERWTTEVRVGVNGTMQMLGGGRNNSTNTSGNNAQSGQQGGWGQPQQPQQTPSAPQNPQNEPPMDFDDDIPF
>NZ_CP018016.1|WP_007372584.1|5283913_5284198_-|DUF1778-domain-containing-protein
MQTPVRKSVRDKQINIRATDEERAVIDYAASLVNKNRTDFIIERAVHEAQNIILDQRVFVLDDARYQAFIRQLEAPVQNVEGRQRLMDVKPEWK
>NZ_CP018016.1|WP_007372585.1|5283440_5283923_-|GNAT-family-N-acetyltransferase
MEINVTAPALLTEEHVLHPFDCGNAVLDDWLRRRALKNQHLNASRTFVICPEGTARVVGYYSLATGSVSHVDLSRSLRQNMPDPVPVVLLGRLAVDVSTQGNNFGKWLLNDAVMRVSNLADQVGIKAIMVHAIDERAKAFYEYFGFVQSPVAANTLFYKI
>NZ_CP018016.1|WP_007372586.1|5281921_5283208_-|TcpQ-domain-containing-protein
MAVPSRRVATGAALLACSVIQAGCSSAVSDPAPFANGRYQQPTRFDDIYRNRAPDVVRYDRYTLVSTRPDDAQRDPLNQIVDITMPAQLVKTVGEGFRYLLLESGYSLCSATTSAFSELLSRPLPAVQRDIGPVRLSEALQIVAGPAWRLKVDDVNREICFELRDQYRSFAAPLPAPVSLVSQHAPVSLPPVIQPARTGGAAGTVNAVPRNPFTGDTSINSTPGTVQKPVLTAQNQSVPSPVLTVAKTPAAQKSAALSPAGRPPVPPPAVAPKAASSQKTPVTAVHPVTVQPATVNAARQTVPVRPVTSLPPAPPVSGQTASSFIPGAPVTPQPVGQTWRAEPGSTLKETLTGWASKATCSNGGNWVVIWPVSLDYRIDAPLVFHGNFESVLVQVFDLYRKAEKPLFAEANRIQCLISVSDTPTGGGH
>NZ_CP018016.1|WP_007372587.1|5281476_5281920_-|type-IV-pilus-biogenesis-protein-PilM
MGYALPVFVFCLVIALMAGDAQRHSAEHVRLSLQQTLPDQLATDMLRTADAVNNWRHGRTVADGTVTPAQAGIVPAPDSRIQTVIQGGRLWVWVPATDGVYAALRTQSVTSALALTVSGGRLRMADGTDMNLSLPSGVTEGSIVYLN
>NZ_CP018016.1|WP_007372588.1|5279783_5281457_-|PilN-family-type-IVB-pilus-formation-outer-membrane-protein
MPRLPFCLTALVAALALSSCSLNEISKMDKEASGQADTAQRVLQSRQTLTQPTVVWSDKPWVNLQPVTPVISTPDEKNLPACQITINRPEGISLPELGQRITALCGIRVSITPDAFAALSSISTGSVVTSQMNGQLPAPDDNGRVPLSQMGTTSAQPVSVQSSPSLIRGLKYQGDIRGLLDMAASGLGLSWRSDSSGVYFYQQDTRTFQLVILNTKVNSSASINSGSGNQLGSGGGTSGGTTGDISSNQKTDYGMNSDLYDDIKKTVEQMVTPKSGRFWLSSATGTLSVTDTPDVLNRIGRYIEYQNKVLSRQVQLNIQIVSVNQTRNEQMGLDWGLVYKSLQNVGASLTGSMANASSSAASAGISILDTASGNAAKFSGSSLLIHALSEQGNVSMALNQTDPTANLTPVAYQLSKSTGMLTSSSSTATANVGVTSTMTTTNVTTGLFMTMLPFIQENGDVQLQFAFSYTSPPDIKSFVSRDGNTRNDTADTSTEGLARKVNLRSGQTLVLTGSEQQNVSADKQGTFTPGNFILGGGQTGSRGRTTLVIMITPVLLR
>NZ_CP018016.1|WP_074169179.1|5278500_5279715_-|type-4b-pilus-protein-PilO2
MAGLHWAPQHSALRVRLRGRASPDTHCVTAGRGSASMAGVVSPGRVRHRLYALAVAFQLSEGGNAWGIYRLSRDEDLWVFFAASGGQLSVMGDVTGTRAFIESAAQNFLRFNDADAPGLRCAATAEDGRDATTLTDRLSGAQLRRCRLRKRLAPMSLILPAVVLTLATAAGVYWHDTVQQQADQDAAMEAFRSRVAPKHDKPALPARAPHPWASQPPVSVLLSNCWLTREPVFASVAGWRFTDGECVPEGLRLRFVATPGSTVEDFSRRARELLGHAAVFNLQEGGKNGDVFIPFRKYLAGEYTDEALPGADAQLMRFISHLQRRNLDVKFTEVKPPAVAPGQEKNTPVQDWREFTFSVSSRLQPERLLQDFDAAGLRLTSVSITMSPQGQFGYTMKGSIYAQN
>NZ_CP018016.1|WP_007372576.1|5290369_5290600_-|hypothetical-protein
MEMGDFSPRQQVSPAVRRRAQQLFRAACGGQKVFRRLTMNGYLKIDVGPCWRILSKDGGRQWWLMDHETYNREIRR
>NZ_CP018016.1|WP_007372575.1|5290599_5291199_-|DUF2857-domain-containing-protein
MSQHNLSQATTAILSSLLMDVKNGNIRRCESLGMSVEEIRALSHLSLDELHYLSQSHVSVLDVTLNHENFWLMLNQARNEQKRFMMIDRALELGGSMELIDRYFGLSPSEVSARRRLMGIESRQGRTQALTEPQDAALWAEWKAAGLSSPDSHQALEAMMLAAEQLGLSLTAVWSRVCQWCREANAAGRRAEIPVRKEA
>NZ_CP018016.1|WP_007372574.1|5291283_5292027_-|DUF2786-domain-containing-protein
MSDNAKITARIRRLMALGTRNSNPHEAARAVALAQRLMQRHGLTPDMLSLSDVSESVCFSLTSDAEKVPAWLSSLATVVCMATGCRCWFGWHIHVSPQGVSSVRRSLHFYGFSERPEVALYIYTVLQRQLRAATDVHMAGYRNRRILLRTRRRRADQFREGWVSGVWQVLQSFSPSGEENAVLQRWLAQRHAGEPLEDMAVRSAGKCRGDRTARVAGFFAGRDTDLHHGLSGAQASRQITAGGHAHD
>NZ_CP018016.1|WP_007372573.1|5292016_5292274_-|TraR/DksA-C4-type-zinc-finger-protein
MSDDLNDEMAQASTALFIQHGIDAIRAKVNSATPSKAFCECCGAAIPVARQLAVPGVELCAGCQEVKEMKNRHRADGGRGMRHVG
>NZ_CP018016.1|WP_007372572.1|5292266_5293973_-|ParB-family-protein
MSNVRNLNLGAAMLQRGKTPAQGDAVPAAVPLPVSEMAMVLTLDQLRPNPDNPRKSRNPHFDEIKASIRACGLVQVPKVTRDPDGEDVYIFSDGGNTRYQILCELWQETGDERFYRVHTIFKPWPGRLKCLVGHLAENEVRGDLSYIDKAFGVHSARAIQEELMGRPVTLRELSDLLNLEGYPIDYSTISRMEDTIKYLWPCIPNLLNSGLARLQVLSLLRIRSQAGKVWSQFAHESSPQCSFDQVFEASCQGFDDPDSYAYETFRDEFIGQLVKALPHPSLNYDRWMIELDPREQKRREQFGEPPPLPVLTPPQEKAAGREPPEPQVTVLPPDTASETPVTGLRSGTLTTPGRPEPAPELPADAELPVNALMTAGSEPRREVQNDLFGGRPVISGETADPDSISLPDFSPDTLMSAFGEENASPAASVSSVAFAATGLEPVSDIWHIPALQDDIEHLQDMAYRLVFEIAEAMGCADNVREDKNPQSAGFAVSETGSEFVLFLAGLSGSLPNRQFNMFMFCLNFFGSQSPADMAVFDDITVVKTMRLIRVIRRLRELQRLAAKGGENV
>NZ_CP018016.1|WP_007372571.1|5293969_5295334_-|replicative-DNA-helicase
MSQQKQNPTVLFSRDAEQSVLGGLMLDNECWDEVALLVSIDDFYYHVHRTIFREMTRLISRGKPIDLITLAESIESQGTNVLDQMGGFAYLAELSKNTPSAANIRAYCEIVSKYSQARQLARIGADITENVQKPGADIPAVMEEAEQKITRLAERAEPEQAHTLIDGMDRLLTELERRCNTPDGITGAATGFKEFDDLTSGLQAGDLVLVAARPSMGKTAFLISLLLNHMMKAPDSRGQFYSLEQPEEQILMRMVSSLSSLELQRLKSGLMDDEDWARVSEAYKICTEDFNARLVIDDTSGLTPQMLRIRARRNARRYGAPSIIGLDYLQLMRSPEQENRTQEIAEISRSLKALAKEMACPVVALSQLNRSLESRQDKRPNNGDLRDSGALEQDADVIVFIYRDEVYHENTEDKGIAEIIISKQRQGPTGTIRLQYEGCFTRFSDIAGRPGRSA
>NZ_CP018016.1|WP_035943483.1|5295333_5296218_-|AAA-family-ATPase
MVAKPKIIPVVSTKGGEGKSTQSANLAGFLADAGIKTLLLDGDHAQPTASSIFPLEYEAPCGLYELLMQTADLSDPDNLISRTSIENLDVIVSNDPRNFLPTAMLNAADGRVRLRNALSHPLFSQYGVIIVDSQGSRSVMSELIILASTGTMVGVAKPILPDVREFMRGTVALMEELLPYSAFGIQLPDTKLLINCMDYDNLSVESLAQVKTIVEEKRYSIHADKIHIDLLNTCIYDLTIYVMGHVKGIPVHRLEKNTSRKSDSAFTSMYQLACELFPEWKDKFDALANAGEVE
>NZ_CP018016.1|WP_007372564.1|5301795_5302608_-|ribokinase
MKVIGIGDNVVDKYEHRRVRYPGGNALNFSVYAAMLDASAAYLGIFGNDAAADHVMRTLAKFGIDTRHCRQVAGENGYARLTIEQGERVFLDSNLGGVRQTESMDFILQKMDWLNDFSLIHTSSYSYIDAQLPALATLSGWLSYDFSDDFVIAQALPLCRWLDAAFFSCAEWSLVETRELLVQAVRAGSGLAVATRGEQGALLFDGKNWYQQEPETVTPVDTLGAGDAFITAFLLHLRQHGNIAAALQAAAHFAARICLVDGAFGEGEAY
>NZ_CP018016.1|WP_007372563.1|5302620_5303595_-|SIS-domain-containing-protein
MQTQSIITSLMSSHFQDKPLRQVFLVACGGSLVDMYPAHYFLNEQSENLRSWMMTANEFVHAAPRALGASSLVIVCSHGGNTPESVAAAQLAKKRGAATITLTHNAEAELLQWADHNLLYKWGDDTLVTENPMALILSLCVDMLHQVEGFAEWQAFQHGFAQIDTVIRQARAKVATRCAAFAERYQHESLFYVLSSGASYGHAYGFAICSLMEMQRLDAASIHSGEFFHGPFEVTDNHVPFILLMNEGRTRALDQRAQAFLNRYNDKTEVVDARELGLNALPASVVDYFNPVLFYSIMCDYRAALADIRQHPLSTRRYMGVVDY
>NZ_CP018016.1|WP_007372562.1|5303599_5304385_-|ABC-transporter-substrate-binding-protein
MKIKKAIAGLASAIAMLGCIHTAVAADQLRFGIDPTFPPFESKNANGQLIGFDIDLGNAICAEMKVQCSWVQNSFDGLIPALQAKKFDAILSSLSITDERKKAISFSDKLFNTPAFLVTAKGSSLTPTAASLKGKRIGVQQGSVFESYANKYWRNAGVEVVAYPDAESVYADLINGRLDGTLDDAVVITEALLSKPQGQNFTLIQPQVKDDEIFGPGTGIGLRQDDKDLQARFNKAIAAIRANGTYDRLAKKYFNFNIYGD

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP018016_2	2.3\|5289591\|31\|NZ_CP018016\|CRT	5289591-5289621	31	LR135896	uncultured phage genomic DNA containing rbcL region region	68325-68355	5	0.839

1. spacer 2.3|5289591|31|NZ_CP018016|CRT matches to LR135896 (uncultured phage genomic DNA containing rbcL region region) position: , mismatch: 5, identity: 0.839

agtga-ttccgggatgtttttggtgctttttt	CRISPR spacer
-ttgacttccgggttgttttttgtgcttttct	Protospacer
  *** ******* ******* ********.*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

597613 : 675205

Escherichia_phage(34.09%)

holin,capsid,plate,integrase,terminase,tRNA,head,lysis,portal,tail

attL 617548:617568|attR 685269:685289

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007369973.1\|597613_598012_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_007369974.1\|598013_598316_-	DUF883 domain-containing protein	NA	NA	NA	NA
WP_007369975.1\|598355_598724_-	DUF1090 domain-containing protein	NA	NA	NA	NA
WP_007369976.1\|598871_599258_-	EnvZ/OmpR regulon moderator MzrA	NA	NA	NA	NA
WP_007369977.1\|599263_599926_-	DedA family protein	NA	NA	NA	NA
WP_007369978.1\|600261_601038_-	transcriptional regulator ExuR	NA	NA	NA	NA
WP_007369979.1\|601169_602468_-	MFS transporter	NA	NA	NA	NA
WP_007369981.1\|602933_604346_+	glucuronate isomerase	NA	NA	NA	NA
WP_007369982.1\|604363_605851_+	altronate dehydratase	NA	NA	NA	NA
WP_007369983.1\|605971_606523_+	YgjV family protein	NA	NA	NA	NA
WP_007369984.1\|606534_607503_-	TerC family protein	A0A291LBC5	Escherichia_phage	8.8e-36	35.1
WP_007369985.1\|607748_608747_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_007369986.1\|608841_610023_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_035887889.1\|610219_611035_+	methionine-binding protein	NA	NA	NA	NA
WP_007369989.1\|611043_612051_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	2.3e-34	38.2
WP_007369990.1\|612043_612721_+	ABC transporter permease	NA	NA	NA	NA
WP_007369991.1\|612737_613196_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_007369992.1\|613198_613960_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_007369993.1\|613997_615191_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
WP_007369994.1\|615227_615842_-	YitT family protein	NA	NA	NA	NA
WP_007369995.1\|616093_616573_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_007369996.1\|616642_617134_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_007369997.1\|617204_618332_+	23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG	NA	NA	NA	NA
617548:617568	attL	NA	NA	NA	NA
WP_007369998.1\|618423_620445_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
WP_035887873.1\|620600_622175_-	autoinducer-2 kinase	NA	NA	NA	NA
WP_007370001.1\|622314_623202_+	3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase	NA	NA	NA	NA
WP_007370002.1\|623198_623492_+	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase	NA	NA	NA	NA
WP_172745712.1\|623579_624959_-	putrescine aminotransferase	A0A1V0SKB7	Klosneuvirus	7.6e-33	28.2
WP_071921575.1\|625390_626911_+	PAS domain-containing methyl-accepting chemotaxis protein	A0A1B0V854	Salmonella_phage	1.3e-33	51.9
WP_035887869.1\|627358_628921_+	MCP four helix bundle domain-containing protein	NA	NA	NA	NA
WP_007370008.1\|628917_629439_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_007370009.1\|629674_630445_+	siderophore-interacting protein	NA	NA	NA	NA
WP_007370010.1\|630480_631650_-	hypothetical protein	NA	NA	NA	NA
WP_007370011.1\|631891_632611_-	SDR family oxidoreductase	M1NMS3	Moumouvirus	5.4e-06	35.7
WP_007370012.1\|632709_633102_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_007370013.1\|633141_634080_-	hypothetical protein	NA	NA	NA	NA
WP_172745713.1\|634896_636585_-	ATP-binding protein	NA	NA	NA	NA
WP_007370015.1\|636705_637725_-\|integrase	tyrosine-type recombinase/integrase	F1BUS9	Erwinia_phage	3.3e-118	62.9
WP_035942017.1\|637733_638339_-	helix-turn-helix domain-containing protein	A0A218M4J1	Erwinia_phage	7.7e-30	32.6
WP_034911927.1\|638428_638665_+	hypothetical protein	NA	NA	NA	NA
WP_007370018.1\|638699_639209_+	phage regulatory CII family protein	Q6K1F8	Salmonella_virus	3.5e-76	82.2
WP_071531968.1\|639216_639408_+	DUF2724 domain-containing protein	Q6K1F7	Salmonella_virus	4.7e-18	63.6
WP_007370020.1\|639371_639710_+	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	1.2e-45	82.1
WP_007370021.1\|639777_640005_+	DUF2732 domain-containing protein	F1BUS3	Erwinia_phage	2.9e-22	72.0
WP_007370022.1\|640004_640226_+	TraR/DksA family transcriptional regulator	A0A0M4S5Q7	Salmonella_phage	1.6e-25	78.1
WP_007370023.1\|640226_642437_+	replication endonuclease	A0A218M4H2	Erwinia_phage	0.0e+00	83.8
WP_035942020.1\|642583_642772_+	hypothetical protein	A0A1S6L006	Salmonella_phage	4.8e-23	90.3
WP_081120689.1\|643055_643766_-	hypothetical protein	NA	NA	NA	NA
WP_007370026.1\|643837_644092_+	hypothetical protein	NA	NA	NA	NA
WP_007370027.1\|644346_645333_+	DGQHR domain-containing protein	NA	NA	NA	NA
WP_007370028.1\|645329_646298_+	hypothetical protein	NA	NA	NA	NA
WP_007370029.1\|646364_647393_-\|portal	phage portal protein	Q6K1J0	Salmonella_virus	2.9e-162	80.4
WP_007370030.1\|647392_649162_-\|terminase	terminase ATPase subunit family protein	A0A0F7LCK3	Escherichia_phage	6.7e-300	85.4
WP_007370031.1\|649339_650200_+\|capsid	GPO family capsid scaffolding protein	S4TP53	Salmonella_phage	1.7e-110	72.4
WP_007370032.1\|650233_651388_+\|capsid	phage major capsid protein, P2 family	A0A0M4R4W2	Salmonella_phage	2.4e-128	62.3
WP_081120691.1\|651391_652150_+\|terminase	terminase endonuclease subunit	Q94MJ2	Enterobacteria_phage	6.4e-82	67.3
WP_081120692.1\|652247_652754_+\|head	head completion/stabilization protein	M1SNN6	Escherichia_phage	4.1e-69	75.6
WP_007370036.1\|652753_652957_+\|tail	tail protein X	Q858W3	Yersinia_virus	1.9e-25	83.6
WP_007370037.1\|652947_653184_+\|holin	holin	A0A218M4L5	Erwinia_phage	2.0e-10	50.8
WP_007370038.1\|653167_653677_+	lysozyme	A0A218M4K3	Erwinia_phage	7.6e-71	79.6
WP_081120694.1\|653673_654105_+\|lysis	LysB family phage lysis regulatory protein	O80310	Escherichia_phage	2.1e-42	67.2
WP_007370042.1\|654194_654662_+\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	5.1e-66	80.0
WP_007370043.1\|654654_655107_+	phage virion morphogenesis protein	O80313	Escherichia_phage	2.7e-48	66.7
WP_007370044.1\|655163_656516_+	DUF4062 domain-containing protein	NA	NA	NA	NA
WP_007370045.1\|656591_657227_+\|plate	phage baseplate assembly protein V	U5N3F0	Enterobacteria_phage	1.1e-98	86.7
WP_007370046.1\|657223_657568_+	GPW/gp25 family protein	A0A0F7LDQ1	Escherichia_phage	5.2e-39	69.6
WP_007370047.1\|657572_658481_+\|plate	baseplate assembly protein	A0A0F7LCJ3	Escherichia_phage	3.0e-134	80.8
WP_035942029.1\|658473_659004_+\|tail	phage tail protein I	Q37841	Escherichia_phage	2.2e-89	85.1
WP_007370049.1\|659014_660580_+\|tail	phage tail protein	Q37842	Escherichia_phage	2.2e-89	77.6
WP_007370050.1\|660582_661089_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	3.2e-13	29.3
WP_007370051.1\|661114_661969_-	benzoate transporter	A0A0N9QAD0	Chrysochromulina_ericina_virus	1.9e-26	32.1
WP_007370052.1\|662239_663430_+\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	4.2e-205	89.6
WP_007370053.1\|663443_663962_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.8e-88	91.9
WP_007370054.1\|664023_664299_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	3.3e-36	86.8
WP_007370055.1\|664331_664451_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	2.0e-14	87.2
WP_081120695.1\|664443_666885_+\|tail	phage tail tape measure protein	S4TP64	Salmonella_phage	2.9e-253	73.2
WP_007370059.1\|666900_667377_+\|tail	phage tail protein	O64315	Escherichia_phage	3.0e-61	72.0
WP_007370060.1\|667376_668543_+	phage late control D family protein	A0A218M4J7	Erwinia_phage	3.5e-164	77.8
WP_071531970.1\|668691_668910_+	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	1.2e-30	81.7
WP_007370061.1\|669256_669763_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_007370062.1\|669820_671665_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-34	33.7
WP_007370063.1\|671822_673568_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.1e-73	37.9
WP_001144069.1\|673738_673954_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_007370064.1\|674191_675205_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	4.5e-107	58.9
685269:685289	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1286375 : 1351319

Erwinia_phage(28.21%)

holin,plate,integrase,tRNA,transposase,tail

attL 1310193:1310210|attR 1352313:1352330

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085949497.1\|1286375_1287523_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.3e-147	92.6
WP_035942391.1\|1287626_1287932_+	hypothetical protein	NA	NA	NA	NA
WP_007370697.1\|1288613_1289096_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
WP_035942114.1\|1289215_1289692_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_007370699.1\|1289681_1289975_+	RnfH family protein	NA	NA	NA	NA
WP_007370700.1\|1290035_1290377_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_007370701.1\|1290525_1292187_-	DNA repair protein RecN	NA	NA	NA	NA
WP_007370702.1\|1292273_1293164_-	NAD(+) kinase	NA	NA	NA	NA
WP_007370704.1\|1293286_1293883_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_035888378.1\|1293924_1295211_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_007370706.1\|1295229_1296018_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_007370707.1\|1296186_1297548_+	signal recognition particle protein	NA	NA	NA	NA
WP_007370708.1\|1297940_1298189_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_007370709.1\|1298207_1298756_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_007370710.1\|1298786_1299554_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_002914145.1\|1299597_1299945_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_071531981.1\|1300100_1300292_-	ogr/Delta-like zinc finger family protein	Q37973	Salmonella_virus	1.3e-20	71.9
WP_007370712.1\|1300366_1301509_-	late control protein D	Q7Y4C6	Escherichia_virus	7.3e-106	52.9
WP_007370713.1\|1301505_1301967_-\|tail	phage tail protein	A0A0F7LBX3	Escherichia_phage	5.6e-49	64.1
WP_007370714.1\|1301963_1303676_-\|tail	phage tail tape measure protein	S4TP64	Salmonella_phage	1.1e-28	38.8
WP_061493592.1\|1303668_1303788_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	7.5e-14	87.2
WP_007370715.1\|1303820_1304102_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	2.7e-30	79.5
WP_007370716.1\|1304164_1304683_-\|tail	phage major tail tube protein	Q858V0	Yersinia_virus	4.5e-87	90.1
WP_007370717.1\|1304695_1305877_-\|tail	phage tail sheath protein	S4TRX2	Salmonella_phage	1.3e-201	88.3
WP_007370719.1\|1306005_1306599_-\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	1.6e-43	49.7
WP_007370720.1\|1306598_1307678_-\|tail	phage tail protein	M1TAS6	Escherichia_phage	2.8e-115	48.1
WP_007370721.1\|1307875_1308472_-\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	4.9e-61	56.9
WP_007370722.1\|1308471_1309530_-\|tail	phage tail protein	A0A2I8TVA9	Erwinia_phage	3.4e-105	57.6
WP_007370723.1\|1309684_1310635_-\|tail	phage tail protein	A0A2I8TVA9	Erwinia_phage	1.4e-78	77.2
1310193:1310210	attL	NA	NA	NA	NA
WP_007370724.1\|1310789_1311398_-\|tail	phage tail protein I	A0A218M4J3	Erwinia_phage	4.5e-86	76.0
WP_007370725.1\|1311390_1312299_-\|plate	baseplate assembly protein	A0A218M4K5	Erwinia_phage	5.2e-131	79.8
WP_007370726.1\|1312303_1312651_-	GPW/gp25 family protein	A0A0F7LDQ1	Escherichia_phage	2.8e-40	73.0
WP_035888404.1\|1312647_1313283_-\|plate	phage baseplate assembly protein V	A0A0F7LDY9	Escherichia_phage	4.4e-92	80.1
WP_079517515.1\|1313370_1313838_-\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	1.3e-48	60.8
WP_007370731.1\|1313933_1314359_-	hypothetical protein	A0A218M4K2	Erwinia_phage	1.1e-27	53.8
WP_007370732.1\|1314355_1314865_-	lysozyme	A0A218M4K3	Erwinia_phage	1.5e-66	75.6
WP_007370733.1\|1314848_1315070_-\|holin	holin	A0A218M4L5	Erwinia_phage	2.9e-11	43.8
WP_035888416.1\|1315060_1315264_-\|tail	tail protein X	Q858W3	Yersinia_virus	3.5e-19	66.7
WP_035888419.1\|1315462_1315648_-	hypothetical protein	A0A0M5M1G5	Salmonella_phage	6.0e-10	55.7
WP_007370736.1\|1315719_1317693_-	replication endonuclease	A0A218M4H2	Erwinia_phage	1.2e-265	72.2
WP_007370737.1\|1317693_1317915_-	TraR/DksA family transcriptional regulator	Q6K1F5	Salmonella_virus	6.9e-21	69.0
WP_007370738.1\|1317914_1318142_-	DUF2732 family protein	A0A218M4I9	Erwinia_phage	4.2e-05	40.0
WP_007370739.1\|1318209_1318548_-	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	1.6e-37	67.6
WP_007370740.1\|1318586_1318964_-	hypothetical protein	A0A0M4R4X7	Salmonella_phage	6.0e-41	69.2
WP_007370742.1\|1319079_1319928_+	phage repressor protein CI	Q6K1G0	Salmonella_virus	4.8e-94	61.7
WP_007370743.1\|1319934_1320984_+\|integrase	site-specific integrase	A0A0M4S6G4	Salmonella_phage	8.7e-154	73.9
WP_007370744.1\|1321172_1321583_+	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_007370745.1\|1321645_1323010_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_007370746.1\|1323190_1324261_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.1e-90	51.5
WP_007370747.1\|1324270_1325392_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_007370748.1\|1325458_1326331_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_007370749.1\|1326327_1327488_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_007370750.1\|1327735_1328074_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_007370751.1\|1328339_1329077_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_007370752.1\|1329208_1330189_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_007370753.1\|1330185_1330917_+	polyphenol oxidase	NA	NA	NA	NA
WP_007370754.1\|1331046_1333620_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	1.9e-125	34.6
WP_007370758.1\|1339331_1340630_+	MFS transporter	Q6JIH2	Burkholderia_virus	6.9e-44	31.5
WP_035888232.1\|1340626_1340950_-	YfiM family lipoprotein	NA	NA	NA	NA
WP_007370760.1\|1340995_1342351_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_007370761.1\|1342464_1345125_-	protein lysine acetyltransferase	NA	NA	NA	NA
WP_007370762.1\|1345157_1345856_-	DTW domain-containing protein	NA	NA	NA	NA
WP_007370763.1\|1345925_1346345_-	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	2.0e-13	41.5
WP_007370764.1\|1346551_1347649_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_007370765.1\|1347694_1348384_-	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	4.6e-55	51.4
WP_007370766.1\|1348696_1349080_+	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	3.1e-32	71.8
WP_007370767.1\|1349123_1350452_-	ATP-dependent RNA helicase SrmB	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.3e-42	30.4
WP_007370768.1\|1350581_1351319_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
1352313:1352330	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1550656 : 1617604

Tetraselmis_virus(20.0%)

holin,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007370955.1\|1550656_1552198_+\|holin	choline-sulfatase	A0A2P0VMN7	Tetraselmis_virus	4.3e-08	21.3
WP_035942148.1\|1552200_1553145_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_081120721.1\|1553451_1554540_+	YncE family protein	NA	NA	NA	NA
WP_035942151.1\|1554591_1556805_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_007370960.1\|1556801_1557701_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_007370961.1\|1557797_1558322_+	N-acetyltransferase	NA	NA	NA	NA
WP_007370962.1\|1558332_1559736_-	glutamine synthetase	NA	NA	NA	NA
WP_007370964.1\|1560025_1560286_+	DUF2534 family protein	NA	NA	NA	NA
WP_007370966.1\|1560573_1562514_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_007370967.1\|1562528_1562915_-	VOC family protein	NA	NA	NA	NA
WP_007370968.1\|1563060_1564458_+	phenylalanine transporter	NA	NA	NA	NA
WP_007370969.1\|1564665_1565535_+	DMT family transporter	NA	NA	NA	NA
WP_007370970.1\|1565523_1566321_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
WP_007370971.1\|1566386_1567805_-	MFS transporter	NA	NA	NA	NA
WP_007370972.1\|1567913_1568786_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_007370973.1\|1568760_1569147_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_007370974.1\|1569136_1569727_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_007370975.1\|1569919_1571020_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_007370976.1\|1571058_1571400_+	RamA family antibiotic efflux transcriptional regulator	NA	NA	NA	NA
WP_007370977.1\|1571438_1571831_-	putative DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_035889037.1\|1571832_1572192_-	putative DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_007370979.1\|1572814_1575004_+	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
WP_007370980.1\|1575046_1576234_-	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA
WP_007370982.1\|1576588_1577827_+	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_007370984.1\|1577903_1578224_-	DUF2502 domain-containing protein	NA	NA	NA	NA
WP_007370985.1\|1578346_1579345_-	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA
WP_007370986.1\|1579525_1581181_+	indolepyruvate decarboxylase	NA	NA	NA	NA
WP_007370987.1\|1581184_1582420_-	ion channel protein	NA	NA	NA	NA
WP_007370988.1\|1582598_1583564_+	glucokinase	NA	NA	NA	NA
WP_007370989.1\|1583560_1584289_-	response regulator transcription factor	A0A2R2ZGH8	Clostridioides_phage	1.9e-14	26.4
WP_145954129.1\|1584301_1585984_-	histidine kinase	NA	NA	NA	NA
WP_007370991.1\|1586371_1587613_+	alanine transaminase	NA	NA	NA	NA
WP_099458783.1\|1587662_1587734_-	membrane protein YpdK	NA	NA	NA	NA
WP_007370992.1\|1588306_1589830_+	histidine ammonia-lyase	A0A1V0S940	Catovirus	5.8e-82	36.9
WP_007370993.1\|1589926_1590574_+	hypothetical protein	NA	NA	NA	NA
WP_007370994.1\|1591158_1591656_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_035889044.1\|1591690_1593238_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_007370996.1\|1593256_1594594_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_007370997.1\|1594590_1595244_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_007370998.1\|1595343_1596972_+	OmpA family protein	NA	NA	NA	NA
WP_007370999.1\|1596977_1597469_+	type VI secretion system effector Hcp	NA	NA	NA	NA
WP_035942155.1\|1597636_1600285_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	3.2e-96	33.1
WP_007371002.1\|1600286_1600892_+	DUF2778 domain-containing protein	NA	NA	NA	NA
WP_007371003.1\|1600888_1601116_+	hypothetical protein	NA	NA	NA	NA
WP_007371004.1\|1601196_1603737_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_007371005.1\|1603738_1605748_+	lipase family protein	A0A1M7XUB5	Cedratvirus	1.4e-06	31.7
WP_035942156.1\|1605740_1606508_+	hypothetical protein	NA	NA	NA	NA
WP_071531985.1\|1607374_1607641_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_007371007.1\|1607644_1608805_+	hypothetical protein	NA	NA	NA	NA
WP_081120722.1\|1608791_1612205_+	type VI secretion protein VasK	NA	NA	NA	NA
WP_007371009.1\|1612204_1613800_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_007371010.1\|1613820_1615584_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_007371011.1\|1615538_1616642_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_035942160.1\|1616616_1617159_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_007371013.1\|1617151_1617604_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_4

1814122 : 1822506

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007371200.1\|1814122_1815070_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	8.1e-10	26.6
WP_007371201.1\|1815053_1815791_+	ABC transporter permease	NA	NA	NA	NA
WP_007371202.1\|1815765_1815879_-	protein YohO	NA	NA	NA	NA
WP_007371203.1\|1815937_1816669_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	1.2e-82	73.9
WP_007371204.1\|1816889_1818578_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	3.2e-259	84.7
WP_007371205.1\|1818571_1819291_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_007371206.1\|1819343_1819820_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.9e-63	78.8
WP_007371207.1\|1819947_1820403_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	9.9e-30	44.9
WP_007371208.1\|1820472_1822506_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.5e-53	27.6

DBSCAN-SWA_5

1895973 : 1906520

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007371271.1\|1895973_1897389_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	1.9e-18	32.6
WP_007371272.1\|1897575_1898469_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	1.3e-44	41.2
WP_007371273.1\|1898868_1899951_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.0e-101	54.2
WP_007371274.1\|1899953_1900853_+	dTDP-4-dehydrorhamnose reductase	A0A140G5S3	Enterobacteria_phage	7.0e-27	33.3
WP_007371275.1\|1900901_1901780_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.5e-106	64.1
WP_007371276.1\|1901782_1902331_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	3.2e-51	56.2
WP_007371277.1\|1902337_1903312_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_007371278.1\|1903328_1904102_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_007371279.1\|1904105_1905185_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	4.0e-13	23.5
WP_007371280.1\|1905206_1906520_+	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	2.8e-53	35.4

DBSCAN-SWA_6

2030872 : 2072422

Enterobacteria_phage(41.03%)

holin,integrase,terminase,protease,portal,tail

attL 2030731:2030790|attR 2074096:2074157

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2030731:2030790	attL	NA	NA	NA	NA
WP_071531992.1\|2030872_2031901_-\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	2.7e-91	53.3
WP_007371405.1\|2031833_2032118_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_007371406.1\|2032188_2034315_-	exonuclease	K7PJT5	Enterobacteria_phage	4.1e-94	41.8
WP_007371407.1\|2034455_2034812_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_007371408.1\|2034846_2035032_-	DUF1482 family protein	NA	NA	NA	NA
WP_050998925.1\|2035298_2035796_+	hypothetical protein	NA	NA	NA	NA
WP_035942205.1\|2036136_2036523_-	helix-turn-helix domain-containing protein	A0A0M4R5D1	Salmonella_phage	5.1e-35	57.1
WP_035942207.1\|2036624_2036870_+	helix-turn-helix domain-containing protein	A0A0M4QX15	Salmonella_phage	2.3e-17	53.2
WP_007371411.1\|2036854_2037409_+	hypothetical protein	NA	NA	NA	NA
WP_007371412.1\|2037464_2038268_+	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	9.5e-52	46.0
WP_007371413.1\|2038270_2039011_+	ATP-binding protein	S4TNF5	Salmonella_phage	2.0e-96	70.4
WP_035942209.1\|2039030_2039471_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_050998890.1\|2039464_2039776_+	hypothetical protein	NA	NA	NA	NA
WP_172745714.1\|2039867_2040020_+	hypothetical protein	NA	NA	NA	NA
WP_007371416.1\|2040092_2040296_+	hypothetical protein	K7PLX1	Enterobacteria_phage	2.3e-15	66.1
WP_145954131.1\|2041332_2041869_+	hypothetical protein	NA	NA	NA	NA
WP_007371419.1\|2042747_2042942_+	hypothetical protein	H6WRY8	Salmonella_phage	8.5e-15	58.7
WP_007371420.1\|2042938_2043307_+	RusA family crossover junction endodeoxyribonuclease	K7P6W0	Enterobacteria_phage	6.5e-40	64.0
WP_007371421.1\|2043291_2044344_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	5.7e-105	54.3
WP_035942215.1\|2044359_2044752_+	DUF1133 family protein	U5P0A5	Shigella_phage	4.2e-45	70.8
WP_145954132.1\|2044767_2045118_-	collagen-like protein	NA	NA	NA	NA
WP_007371423.1\|2045412_2046474_+	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	7.6e-174	81.7
WP_007371424.1\|2046614_2046938_+\|holin	phage holin, lambda family	Q5G8R5	Enterobacteria_phage	1.5e-40	78.3
WP_145954133.1\|2046918_2047362_+	glycoside hydrolase family protein	A0A0M4R365	Salmonella_phage	1.3e-55	76.5
WP_007371426.1\|2047358_2047904_+	hypothetical protein	K7PHH7	Enterobacteria_phage	1.3e-47	64.6
WP_081120734.1\|2048025_2048937_+	hypothetical protein	NA	NA	NA	NA
WP_007371428.1\|2049518_2050007_+	DUF1441 family protein	K7PJY2	Enterobacterial_phage	4.3e-71	87.0
WP_007371429.1\|2050006_2052115_+\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	0.0e+00	83.9
WP_007371430.1\|2052111_2052327_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.5e-25	80.0
WP_035942216.1\|2052323_2053826_+\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	1.6e-246	83.0
WP_035942219.1\|2053770_2055783_+\|protease	Clp protease ClpP	K7PKX4	Enterobacterial_phage	9.3e-306	77.3
WP_007371433.1\|2055863_2056187_+	DUF2190 family protein	K7PJY3	Enterobacterial_phage	8.3e-23	54.3
WP_007371434.1\|2056179_2056455_+	DNA breaking-rejoining protein	K7PH55	Enterobacterial_phage	2.0e-17	53.8
WP_007371435.1\|2056464_2057016_+\|tail	phage tail protein	K7P7A8	Enterobacteria_phage	1.6e-58	75.5
WP_035942221.1\|2057012_2057411_+\|tail	phage tail protein	A0A0K2FIF4	Enterobacteria_phage	1.5e-37	57.6
WP_007371437.1\|2057421_2058156_+\|tail	phage tail protein	M9NYX0	Enterobacteria_phage	3.6e-74	73.6
WP_007371438.1\|2058191_2058599_+\|tail	phage minor tail protein G	M9NZD7	Enterobacteria_phage	4.0e-14	39.9
WP_007371439.1\|2058607_2058916_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.4e-24	56.4
WP_007371440.1\|2058896_2061398_+\|tail	phage tail tape measure protein	K7PKR0	Enterobacteria_phage	9.0e-149	39.9
WP_007371441.1\|2061400_2061748_+\|tail	phage tail protein	K7PJT2	Enterobacteria_phage	8.3e-37	67.0
WP_007371442.1\|2061744_2062500_+\|tail	phage minor tail protein L	K7PKU0	Enterobacteria_phage	9.4e-126	84.1
WP_071531994.1\|2063308_2063713_+	hypothetical protein	A0A286S1N7	Klebsiella_phage	1.4e-19	42.2
WP_007371444.1\|2063756_2064356_+\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	8.9e-79	77.4
WP_035942428.1\|2064556_2064739_+	hypothetical protein	NA	NA	NA	NA
WP_007371446.1\|2064788_2067974_+	host specificity protein J	O64335	Escherichia_phage	0.0e+00	82.1
WP_035942223.1\|2067973_2068276_+	hypothetical protein	K7PJS1	Enterobacterial_phage	1.6e-39	76.5
WP_035942224.1\|2068276_2068951_+	hypothetical protein	O64337	Escherichia_phage	3.6e-84	69.3
WP_007371449.1\|2069059_2069296_+	hypothetical protein	K7PLZ0	Enterobacterial_phage	1.0e-17	56.4
WP_007371450.1\|2069352_2070573_+\|tail	tail fiber domain-containing protein	S4TSP4	Salmonella_phage	5.5e-51	61.9
WP_007371451.1\|2070731_2071154_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	5.0e-36	58.9
WP_007371452.1\|2071156_2072422_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	5.4e-211	84.6
2074096:2074157	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2293983 : 2373064

Ralstonia_phage(20.0%)

plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007371687.1\|2293983_2294553_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_007371688.1\|2294555_2296427_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_007371689.1\|2296423_2297467_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_007371690.1\|2297511_2300124_+	type VI secretion system ATPase TssH	A0A248SJW6	Salicola_phage	8.4e-81	31.1
WP_007371691.1\|2300150_2301587_+	protein kinase	M1HXR9	Acanthocystis_turfacea_Chlorella_virus	3.6e-09	27.3
WP_007371692.1\|2301676_2302117_+	DcrB-related protein	NA	NA	NA	NA
WP_081120738.1\|2302175_2304431_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	8.3e-45	28.3
WP_007371695.1\|2304446_2304824_+	hypothetical protein	NA	NA	NA	NA
WP_050998894.1\|2305275_2305479_+	hypothetical protein	NA	NA	NA	NA
WP_007371697.1\|2305568_2305955_+	DUF3592 domain-containing protein	NA	NA	NA	NA
WP_081120739.1\|2306178_2308719_+	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_081120741.1\|2308715_2309801_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_007371700.1\|2309797_2310403_+	DUF3540 domain-containing protein	NA	NA	NA	NA
WP_007371701.1\|2310412_2310805_+	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_081120742.1\|2310899_2313479_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	6.6e-46	28.7
WP_107146662.1\|2313552_2313990_+	hypothetical protein	NA	NA	NA	NA
WP_007371706.1\|2314100_2314529_+	DcrB-related protein	NA	NA	NA	NA
WP_079517792.1\|2314542_2318970_+	PAAR/RHS domain-containing protein	A0A2H4JFP5	uncultured_Caudovirales_phage	1.6e-28	48.3
WP_079517793.1\|2318979_2319318_+	hypothetical protein	NA	NA	NA	NA
WP_007371709.1\|2319372_2319783_+	RHS domain-containing protein	A0A2H4JFP5	uncultured_Caudovirales_phage	8.4e-20	46.8
WP_081120744.1\|2319982_2320285_+	hypothetical protein	NA	NA	NA	NA
WP_007371710.1\|2320364_2320544_+	hypothetical protein	NA	NA	NA	NA
WP_007371712.1\|2321184_2322834_-	fumarate hydratase	NA	NA	NA	NA
WP_007371713.1\|2322885_2324397_-	anion permease	NA	NA	NA	NA
WP_081120747.1\|2325034_2327812_+	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	1.1e-70	32.1
WP_007371715.1\|2327976_2328939_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_007371716.1\|2328919_2329639_-	two-component system response regulator DcuR	NA	NA	NA	NA
WP_035942242.1\|2329635_2331252_-	two-component system sensor histidine kinase DcuS	NA	NA	NA	NA
WP_007371718.1\|2331428_2332343_+	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_007371719.1\|2332624_2334277_+	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_007371723.1\|2336077_2336776_+	glutamine amidotransferase	A0A2K9L2L9	Tupanvirus	7.3e-08	26.7
WP_007371725.1\|2337003_2337831_+	nitrogenase iron protein	NA	NA	NA	NA
WP_007371726.1\|2337875_2339447_+	nitrogenase iron-iron protein, alpha chain	NA	NA	NA	NA
WP_007371727.1\|2339443_2339788_+	Fe-only nitrogenase subunit delta	NA	NA	NA	NA
WP_007371728.1\|2339799_2341188_+	Fe-only nitrogenase subunit beta	NA	NA	NA	NA
WP_007371729.1\|2341231_2341654_+	hypothetical protein	NA	NA	NA	NA
WP_139201275.1\|2341686_2342145_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_007371731.1\|2342157_2342769_+	iron only nitrogenase AnfO family protein	NA	NA	NA	NA
WP_158262945.1\|2345039_2345843_+\|protease	serine protease	NA	NA	NA	NA
WP_007371734.1\|2345874_2347611_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_007371735.1\|2347884_2349405_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_035942243.1\|2349432_2350464_+	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	3.0e-34	28.1
WP_007371737.1\|2350505_2351390_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_007371738.1\|2351473_2351827_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_007371739.1\|2351866_2352877_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_007371741.1\|2352955_2353936_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_007371742.1\|2354113_2354323_+	hypothetical protein	NA	NA	NA	NA
WP_007371743.1\|2354668_2356852_-	catalase/peroxidase HPI	NA	NA	NA	NA
WP_007371744.1\|2357173_2357962_-	hypothetical protein	NA	NA	NA	NA
WP_007371745.1\|2358504_2359059_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_007371746.1\|2359580_2362091_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.7e-83	34.1
WP_007371747.1\|2362110_2365539_-	hypothetical protein	NA	NA	NA	NA
WP_007371748.1\|2365545_2366166_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_007371749.1\|2366162_2367524_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_007371750.1\|2367525_2368155_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_007371751.1\|2368154_2369207_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_035888596.1\|2369213_2369513_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_007371753.1\|2369512_2369959_-	hypothetical protein	NA	NA	NA	NA
WP_007371754.1\|2369969_2372108_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_007371755.1\|2372122_2373064_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_8

3129979 : 3195431

Pectobacterium_phage(53.33%)

holin,plate,integrase,terminase,head,transposase,tail

attL 3148720:3148735|attR 3168055:3168070

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007369221.1\|3129979_3130414_-\|transposase	IS200/IS605 family transposase	Q331U4	Clostridium_botulinum_C_phage	6.8e-20	39.2
WP_007374756.1\|3130564_3131200_-	riboflavin synthase	A0A1V0SE20	Indivirus	1.1e-23	35.9
WP_007374754.1\|3131512_3132886_+	MdtK family multidrug efflux MATE transporter	NA	NA	NA	NA
WP_007374753.1\|3133284_3134340_-	NAD(P)-dependent alcohol dehydrogenase	A0A2K9L7I1	Tupanvirus	1.1e-84	43.4
WP_007374752.1\|3134521_3135244_-	amino acid ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.1e-06	34.1
WP_007374751.1\|3135230_3135995_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_035889233.1\|3136064_3136832_-	basic amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_007374749.1\|3137004_3137796_+	inositol monophosphatase family protein	NA	NA	NA	NA
WP_007374747.1\|3138303_3139716_+	pyruvate kinase PykF	NA	NA	NA	NA
WP_007374746.1\|3140025_3140262_+	major outer membrane lipoprotein	NA	NA	NA	NA
WP_007374745.1\|3140332_3141343_-	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_007374744.1\|3141438_3141855_-	cysteine desulfuration protein SufE	NA	NA	NA	NA
WP_035889231.1\|3141869_3143090_-	cysteine desulfurase SufS	Q2XUY6	environmental_halophage	1.7e-92	41.4
WP_007374742.1\|3143086_3144358_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_007374741.1\|3144332_3145079_-	Fe-S cluster assembly ATPase SufC	A0A1V0SE00	Indivirus	1.1e-06	24.3
WP_007374740.1\|3145096_3146581_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_007374739.1\|3146589_3146946_-	Fe-S cluster assembly scaffold SufA	A0A2H4N7N5	Lake_Baikal_phage	7.0e-15	38.5
WP_007374737.1\|3147504_3148290_+	alpha/beta fold hydrolase	NA	NA	NA	NA
3148720:3148735	attL	NA	NA	NA	NA
WP_007374735.1\|3149067_3149805_+	EAL domain-containing protein	NA	NA	NA	NA
WP_035889223.1\|3149807_3150164_-	hypothetical protein	NA	NA	NA	NA
WP_007374733.1\|3150227_3151142_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	4.8e-76	53.1
WP_007374732.1\|3151354_3151765_-	1,4-dihydroxy-2-naphthoyl-CoA hydrolase	NA	NA	NA	NA
WP_007374731.1\|3151761_3154818_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_007374729.1\|3155026_3156136_+	AI-2E family transporter YdiK	NA	NA	NA	NA
WP_007374728.1\|3156446_3156635_-	hypothetical protein	NA	NA	NA	NA
WP_007374726.1\|3156766_3156967_-	hypothetical protein	NA	NA	NA	NA
WP_007374724.1\|3157225_3159598_-	glycoside hydrolase family 3 C-terminal domain-containing protein	NA	NA	NA	NA
WP_007374723.1\|3159594_3161004_-	MFS transporter	NA	NA	NA	NA
WP_007374722.1\|3161372_3162464_+\|integrase	site-specific integrase	S5MDN5	Escherichia_phage	1.7e-112	54.7
WP_035943398.1\|3162557_3162980_-	hypothetical protein	K7P834	Enterobacteria_phage	1.1e-35	54.7
WP_007374721.1\|3163122_3163797_-	hypothetical protein	NA	NA	NA	NA
WP_035943396.1\|3163800_3165864_-\|tail	tail fiber protein	H9C1B7	Pectobacterium_phage	3.7e-172	51.0
WP_007374718.1\|3165926_3168389_-	discoidin domain-containing protein	H9C1B5	Pectobacterium_phage	6.7e-205	51.4
3168055:3168070	attR	NA	NA	NA	NA
WP_007374717.1\|3168390_3169293_-	DUF2612 domain-containing protein	H9C1B4	Pectobacterium_phage	3.7e-105	66.0
WP_007374716.1\|3169279_3170494_-\|plate	baseplate J/gp47 family protein	H9C1B3	Pectobacterium_phage	1.5e-162	71.8
WP_007374715.1\|3170493_3170844_-	hypothetical protein	H9C1B2	Pectobacterium_phage	8.6e-50	80.2
WP_007374714.1\|3170905_3171508_-	hypothetical protein	H9C1B1	Pectobacterium_phage	8.9e-79	65.6
WP_007374713.1\|3171504_3172395_-	hypothetical protein	H9C1B0	Pectobacterium_phage	3.3e-146	79.7
WP_007374712.1\|3172387_3172678_-	hypothetical protein	H9C1A9	Pectobacterium_phage	9.7e-39	78.1
WP_007374711.1\|3172674_3173319_-	hypothetical protein	H9C1A8	Pectobacterium_phage	2.3e-72	73.4
WP_007374710.1\|3173321_3175019_-	glycoside hydrolase family 104 protein	H9C1A7	Pectobacterium_phage	1.1e-179	59.4
WP_007374709.1\|3175189_3175450_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5NR91	Burkholderia_phage	4.6e-08	39.5
WP_035943390.1\|3175522_3175894_+	transcriptional regulator	NA	NA	NA	NA
WP_007374706.1\|3176091_3176478_-	hypothetical protein	H9C1A4	Pectobacterium_phage	5.8e-39	64.2
WP_007374705.1\|3176477_3176882_-	hypothetical protein	H9C1A3	Pectobacterium_phage	5.8e-66	95.5
WP_007374704.1\|3176888_3178043_-	DUF3383 family protein	H9C1A2	Pectobacterium_phage	3.1e-197	88.5
WP_007374703.1\|3178051_3178576_-	hypothetical protein	H9C1A1	Pectobacterium_phage	3.4e-82	83.3
WP_007374702.1\|3178575_3178995_-	hypothetical protein	H9C1A0	Pectobacterium_phage	5.8e-69	84.3
WP_007374701.1\|3178997_3179465_-	hypothetical protein	H9C199	Pectobacterium_phage	1.8e-63	79.4
WP_035943388.1\|3179461_3179872_-	DUF4054 domain-containing protein	H9C198	Pectobacterium_phage	6.8e-62	87.5
WP_007374699.1\|3179913_3180267_-	hypothetical protein	H9C197	Pectobacterium_phage	1.1e-20	44.4
WP_007374698.1\|3180269_3181220_-	DUF2184 domain-containing protein	H9C196	Pectobacterium_phage	6.2e-151	84.4
WP_007374697.1\|3181234_3181753_-	hypothetical protein	H9C195	Pectobacterium_phage	1.2e-52	68.3
WP_007374696.1\|3181752_3182952_-	DUF2213 domain-containing protein	H9C194	Pectobacterium_phage	1.3e-148	82.5
WP_035943386.1\|3182970_3183720_-\|head	phage head morphogenesis protein	H9C193	Pectobacterium_phage	8.8e-100	74.3
WP_007374694.1\|3183769_3185161_-	DUF1073 domain-containing protein	H9C192	Pectobacterium_phage	4.9e-213	78.4
WP_007374693.1\|3185163_3186804_-\|terminase	phage terminase large subunit	H9C191	Pectobacterium_phage	5.4e-304	89.6
WP_081120792.1\|3187036_3188059_-\|terminase	terminase small subunit	Q5QF76	Pseudomonas_virus	3.9e-34	41.6
WP_007374691.1\|3188197_3188716_-	hypothetical protein	NA	NA	NA	NA
WP_035943383.1\|3188855_3189152_-	hypothetical protein	NA	NA	NA	NA
WP_007374690.1\|3189719_3189935_+	hypothetical protein	NA	NA	NA	NA
WP_007374689.1\|3190360_3190897_-	hypothetical protein	K7PHH7	Enterobacteria_phage	3.7e-52	66.0
WP_145954142.1\|3190893_3191337_-	glycoside hydrolase family protein	A0A0M4R365	Salmonella_phage	1.9e-57	78.5
WP_007374687.1\|3191317_3191641_-\|holin	phage holin, lambda family	Q5G8R5	Enterobacteria_phage	1.7e-39	77.4
WP_007374686.1\|3191986_3193048_-	site-specific DNA-methyltransferase	Q8SBE2	Shigella_phage	1.9e-172	81.2
WP_007374685.1\|3193197_3193389_-	hypothetical protein	Q8SBE3	Shigella_phage	2.0e-16	68.3
WP_007374684.1\|3193558_3194245_-	antitermination protein	I6PDF8	Cronobacter_phage	1.7e-62	54.4
WP_007374683.1\|3194348_3194642_-	DUF1364 domain-containing protein	E5AGG0	Erwinia_phage	7.0e-37	72.2
WP_172745721.1\|3194634_3194835_-	hypothetical protein	K7PJT9	Enterobacteria_phage	9.7e-14	68.4
WP_145954143.1\|3194834_3195431_-	DUF1367 family protein	S4TTI0	Salmonella_phage	5.9e-91	82.4

DBSCAN-SWA_9

3205817 : 3217444

Salmonella_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007374668.1\|3205817_3206105_+	hypothetical protein	H6WRX2	Salmonella_phage	7.6e-28	57.9
WP_081120796.1\|3206237_3209171_+	PD-(D/E)XK nuclease-like domain-containing protein	K7PJT5	Enterobacteria_phage	2.4e-262	55.2
WP_007374665.1\|3209180_3210260_+	recombinase RecT	H6WRX0	Salmonella_phage	2.2e-99	52.6
WP_007374664.1\|3210300_3210480_+	hypothetical protein	G8C7S7	Escherichia_phage	9.9e-10	63.3
WP_007374663.1\|3210466_3210730_+	DUF4060 family protein	K7PHF4	Enterobacteria_phage	9.7e-22	70.7
WP_007374662.1\|3210828_3211083_+	pyocin activator PrtN family protein	A0A1W6JP35	Morganella_phage	1.3e-18	54.8
WP_007374661.1\|3211240_3213619_-	phosphoenolpyruvate synthase	A0A1V0SGR7	Hokovirus	1.7e-173	36.6
WP_035886099.1\|3213949_3214783_+	kinase/pyrophosphorylase	NA	NA	NA	NA
WP_007374658.1\|3214945_3215254_-	hypothetical protein	NA	NA	NA	NA
WP_007374657.1\|3215561_3215789_-	hypothetical protein	NA	NA	NA	NA
WP_007374656.1\|3216397_3217444_+	3-deoxy-7-phosphoheptulonate synthase AroH	S4W5F1	Pandoravirus	6.1e-83	48.0

DBSCAN-SWA_10

3492483 : 3501543

Burkholderia_phage(28.57%)

transposase,integrase

attL 3487490:3487505|attR 3505794:3505809

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3487490:3487505	attL	NA	NA	NA	NA
WP_007374361.1\|3492483_3493716_-	type II restriction endonuclease	E5E3X4	Burkholderia_phage	1.2e-74	39.9
WP_007374360.1\|3493809_3495246_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	6.4e-107	51.4
WP_035943290.1\|3495527_3495893_-	plasmid stabilization protein	A0A222YWJ6	Escherichia_phage	1.6e-14	43.0
WP_007374358.1\|3495898_3496855_-	recombinase	A0A222YXF2	Escherichia_phage	2.6e-128	70.1
WP_007374356.1\|3497350_3497569_-	AlpA family phage regulatory protein	A0A1V0E8E5	Vibrio_phage	2.8e-06	41.7
WP_085949497.1\|3498264_3499412_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.3e-147	92.6
WP_145954147.1\|3499492_3500194_+	hypothetical protein	NA	NA	NA	NA
WP_035943286.1\|3500340_3501543_-\|integrase	tyrosine-type recombinase/integrase	A0A077KET4	Ralstonia_phage	4.7e-55	37.4
3505794:3505809	attR	NA	NA	NA	NA

DBSCAN-SWA_11

3601210 : 3611470

Salmonella_phage(33.33%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035943266.1\|3601210_3601573_+	GtrA family protein	B9UDL8	Salmonella_phage	1.8e-42	75.0
WP_007374255.1\|3601569_3602511_+	glycosyltransferase family 2 protein	A8CG95	Salmonella_phage	1.7e-156	88.2
WP_081120817.1\|3602507_3603995_+	hypothetical protein	NA	NA	NA	NA
WP_007374252.1\|3604033_3606436_-\|tail	phage T7 tail fiber family protein	A0A0F6TJC8	Escherichia_coli_O157_typing_phage	2.1e-86	50.7
WP_007374251.1\|3606531_3606771_-	DUF1378 family protein	NA	NA	NA	NA
WP_007374250.1\|3606767_3607298_-	hypothetical protein	K7P6W1	Enterobacteria_phage	4.7e-31	57.4
WP_035943258.1\|3607294_3607825_-	lysozyme	K7PLY1	Enterobacteria_phage	9.6e-85	82.9
WP_007374248.1\|3607799_3608159_-	hypothetical protein	NA	NA	NA	NA
WP_007374247.1\|3608194_3608545_+	hypothetical protein	NA	NA	NA	NA
WP_007374246.1\|3608545_3611470_-	hypothetical protein	W6MWW8	Pseudomonas_phage	3.3e-195	40.5

DBSCAN-SWA_12

3621138 : 3644925

Pectobacterium_phage(27.27%)

integrase,head,tail

attL 3611938:3611952|attR 3645018:3645032

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3611938:3611952	attL	NA	NA	NA	NA
WP_007374236.1\|3621138_3622134_-	hypothetical protein	W6MW28	Pseudomonas_phage	8.3e-106	59.6
WP_007374235.1\|3622144_3622879_-	hypothetical protein	NA	NA	NA	NA
WP_007374234.1\|3622865_3623189_-	hypothetical protein	NA	NA	NA	NA
WP_007374233.1\|3623188_3624856_-\|head,tail	head-tail connector protein	A0A221SAN2	Ralstonia_phage	1.1e-102	38.5
WP_007374232.1\|3624855_3626253_-	hypothetical protein	A0A0E3JIA1	Rhodoferax_phage	8.5e-56	36.5
WP_007374231.1\|3626337_3626790_-	DNA-packaging protein	I6S1J2	Salmonella_phage	8.5e-50	67.9
WP_007374230.1\|3626796_3627096_-	hypothetical protein	NA	NA	NA	NA
WP_007374229.1\|3627109_3627313_-	hypothetical protein	NA	NA	NA	NA
WP_007374228.1\|3627373_3627889_-	DUF2829 domain-containing protein	A0A1B0VMG3	Pseudomonas_phage	7.2e-45	58.5
WP_007374227.1\|3627924_3628209_-	hypothetical protein	G8C7W3	Escherichia_phage	8.6e-32	75.5
WP_007374226.1\|3628205_3628562_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_007374225.1\|3628549_3628852_-	DUF968 domain-containing protein	A0A1I9KFA7	Aeromonas_phage	2.4e-24	53.7
WP_007374224.1\|3628862_3629459_-	DUF1367 family protein	H9C173	Pectobacterium_phage	1.0e-79	70.7
WP_035943255.1\|3629526_3629718_-	hypothetical protein	NA	NA	NA	NA
WP_007374223.1\|3629845_3630013_-	hypothetical protein	NA	NA	NA	NA
WP_145954166.1\|3630079_3630319_-	DUF4752 family protein	K7PHN1	Enterobacterial_phage	1.8e-19	53.3
WP_007374221.1\|3630359_3631493_-	hypothetical protein	Q71TI5	Escherichia_phage	1.1e-05	65.0
WP_007374220.1\|3631489_3631669_-	hypothetical protein	NA	NA	NA	NA
WP_007374219.1\|3631671_3632493_-	ead/Ea22-like family protein	A0A2H4N7C3	Pectobacterium_phage	8.6e-24	69.9
WP_007374218.1\|3632485_3632680_-	hypothetical protein	NA	NA	NA	NA
WP_007374217.1\|3632672_3632897_-	hypothetical protein	NA	NA	NA	NA
WP_007374216.1\|3632893_3633382_-	hypothetical protein	K7PHA5	Enterobacterial_phage	4.8e-22	46.9
WP_007374214.1\|3633503_3633749_-	hypothetical protein	NA	NA	NA	NA
WP_007374213.1\|3633752_3634439_-	hypothetical protein	NA	NA	NA	NA
WP_035943250.1\|3634481_3635873_-	AAA family ATPase	Q76H51	Enterobacteria_phage	8.3e-104	47.0
WP_007374211.1\|3635869_3637246_-	hypothetical protein	A0A067ZIA1	Vibrio_phage	7.4e-28	53.9
WP_007374210.1\|3637248_3637470_-	hypothetical protein	H9C163	Pectobacterium_phage	1.4e-10	47.9
WP_007374209.1\|3637488_3637935_-	hypothetical protein	H9C162	Pectobacterium_phage	2.6e-27	51.8
WP_035943249.1\|3637998_3638202_-	Cro/Cl family transcriptional regulator	K7PHK4	Enterobacteria_phage	2.3e-07	46.6
WP_081120820.1\|3638280_3638682_+	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	1.1e-37	59.0
WP_007374207.1\|3638774_3639131_-	hypothetical protein	NA	NA	NA	NA
WP_145954167.1\|3639562_3639802_+	hypothetical protein	NA	NA	NA	NA
WP_007374205.1\|3639814_3640003_+	hypothetical protein	NA	NA	NA	NA
WP_081120822.1\|3640020_3642276_+	hypothetical protein	H9C157	Pectobacterium_phage	3.1e-108	35.4
WP_007374203.1\|3642272_3642713_+	hypothetical protein	A4KWU0	Enterobacteria_phage	3.7e-66	76.0
WP_007374202.1\|3642723_3643284_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	7.6e-48	57.6
WP_035943246.1\|3643286_3643469_+	hypothetical protein	NA	NA	NA	NA
WP_007374199.1\|3643680_3643905_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_007374198.1\|3643905_3644925_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	9.2e-92	53.2
3645018:3645032	attR	NA	NA	NA	NA

DBSCAN-SWA_13

4141757 : 4149888

uncultured_Caudovirales_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007373725.1\|4141757_4142012_+	DUF1471 domain-containing protein	A0A1B2IB27	Erwinia_phage	6.1e-05	49.1
WP_007373724.1\|4142115_4142472_+	helix-turn-helix domain-containing protein	D0R0F8	Streptococcus_phage	3.2e-07	36.9
WP_007373722.1\|4142715_4143054_+	hypothetical protein	NA	NA	NA	NA
WP_007373721.1\|4143337_4144465_+	porin OmpC	Q1MVN1	Enterobacteria_phage	8.5e-99	51.3
WP_007373720.1\|4144675_4144930_+	DUF1471 domain-containing protein	A0A1B2ICL8	Erwinia_phage	9.4e-06	49.1
WP_007373719.1\|4145016_4145442_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.9e-51	70.7
WP_007373718.1\|4145454_4146744_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	2.0e-168	72.3
WP_007373717.1\|4146787_4147108_-	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	7.7e-21	48.0
WP_007373716.1\|4147282_4148689_-	heavy metal sensor histidine kinase	NA	NA	NA	NA
WP_007373715.1\|4148700_4149393_-	heavy metal response regulator transcription factor	W8CYM9	Bacillus_phage	5.5e-32	34.2
WP_007373714.1\|4149555_4149888_-	helix-turn-helix domain-containing protein	D0R0F8	Streptococcus_phage	6.1e-05	29.5

DBSCAN-SWA_14

5210764 : 5222026

Stx2-converting_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372668.1\|5210764_5212273_-	DNA mismatch repair protein MutS	A0A076FGT9	Aureococcus_anophage	1.2e-07	24.6
WP_007372667.1\|5212269_5213808_-	DNA mismatch repair protein MutS	NA	NA	NA	NA
WP_035942995.1\|5214856_5215246_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.1e-28	57.0
WP_007372664.1\|5215327_5216617_-	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	3.7e-122	53.7
WP_007372662.1\|5217061_5217454_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.3e-54	83.8
WP_031594183.1\|5217450_5217798_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.1e-60	95.7
WP_081120870.1\|5217847_5219386_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	4.2e-274	92.4
WP_007372658.1\|5219517_5220426_-	DHH family phosphoesterase	NA	NA	NA	NA
WP_074167171.1\|5220868_5222026_+	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	4.6e-124	65.1

DBSCAN-SWA_15

5233142 : 5240266

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372641.1\|5233142_5233496_+	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	2.6e-22	47.2
WP_007372640.1\|5233552_5234032_+	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	1.7e-35	52.6
WP_007372639.1\|5234054_5234420_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_007372638.1\|5234443_5236210_+	arsenical pump-driving ATPase	NA	NA	NA	NA
WP_007372637.1\|5236250_5237540_+	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	2.5e-171	72.8
WP_007372636.1\|5237597_5238026_+	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.8e-49	70.7
WP_007372635.1\|5238098_5238608_+	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	6.5e-22	37.8
WP_050998929.1\|5238732_5239245_+	tyrosine-protein phosphatase	NA	NA	NA	NA
WP_007372633.1\|5239543_5240266_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.0e-97	72.6

DBSCAN-SWA_16

5629018 : 5711094

Escherichia_phage(27.91%)

holin,plate,capsid,integrase,terminase,tRNA,head,transposase,protease,lysis,portal,tail

attL 5674026:5674068|attR 5708312:5708354

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007369203.1\|5629018_5630119_+\|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	A0A2K5B251	Erysipelothrix_phage	6.1e-17	26.4
WP_007369204.1\|5630156_5630522_-	YijD family membrane protein	NA	NA	NA	NA
WP_035889190.1\|5630521_5631175_-	HTH-type transcriptional repressor FabR	NA	NA	NA	NA
WP_035889188.1\|5631370_5632771_+	Si-specific NAD(P)(+) transhydrogenase	NA	NA	NA	NA
WP_007369207.1\|5632753_5633671_-	DNA-binding transcriptional regulator OxyR	NA	NA	NA	NA
WP_007369208.1\|5633932_5635306_-	argininosuccinate lyase	NA	NA	NA	NA
WP_090398622.1\|5635423_5636200_-	acetylglutamate kinase	NA	NA	NA	NA
WP_007369210.1\|5636210_5637215_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_007369211.1\|5637383_5638535_+	acetylornithine deacetylase	NA	NA	NA	NA
WP_007369212.1\|5638799_5641451_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
WP_007369213.1\|5641545_5642397_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_007369214.1\|5642614_5643277_+	fructose-6-phosphate aldolase	M4SLG0	Cyanophage	1.4e-29	34.4
WP_007369215.1\|5643288_5644392_+	glycerol dehydrogenase	NA	NA	NA	NA
WP_007369216.1\|5644477_5645368_-	methylenetetrahydrofolate reductase	NA	NA	NA	NA
WP_007369218.1\|5645573_5648006_-	bifunctional aspartate kinase/homoserine dehydrogenase II	NA	NA	NA	NA
WP_007369219.1\|5648008_5649169_-	cystathionine gamma-synthase	NA	NA	NA	NA
WP_007369220.1\|5649432_5649750_+	met regulon transcriptional regulator MetJ	NA	NA	NA	NA
WP_007369221.1\|5649831_5650266_-\|transposase	IS200/IS605 family transposase	Q331U4	Clostridium_botulinum_C_phage	6.8e-20	39.2
WP_139201294.1\|5650438_5650648_-	hypothetical protein	NA	NA	NA	NA
WP_007369223.1\|5650683_5650896_-	50S ribosomal protein L31	NA	NA	NA	NA
WP_007369224.1\|5651103_5653296_+	primosomal protein N'	NA	NA	NA	NA
WP_007369225.1\|5653420_5654446_+	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA
WP_035941935.1\|5654539_5655541_+	cell division protein FtsN	NA	NA	NA	NA
WP_007369227.1\|5655633_5656164_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_007369228.1\|5656173_5657505_+	HslU--HslV peptidase ATPase subunit	W6AS21	Erwinia_phage	7.1e-44	29.7
WP_007369229.1\|5657571_5658501_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_007369230.1\|5658593_5659079_+	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_007369231.1\|5659250_5659496_-	septal ring assembly protein ZapB	NA	NA	NA	NA
WP_007369232.1\|5659922_5660771_+	aquaporin family protein	M1HWZ0	Paramecium_bursaria_Chlorella_virus	7.5e-15	28.4
WP_007369233.1\|5660792_5662301_+	glycerol kinase GlpK	NA	NA	NA	NA
WP_007369234.1\|5662402_5663413_+	class II fructose-bisphosphatase	NA	NA	NA	NA
WP_007369235.1\|5663509_5664256_+	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
WP_007369236.1\|5664256_5664676_-	DUF805 domain-containing protein	NA	NA	NA	NA
WP_007369237.1\|5664788_5665388_+	YiiQ family protein	NA	NA	NA	NA
WP_007369238.1\|5665495_5666263_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_007369239.1\|5666403_5667708_-	anion permease	NA	NA	NA	NA
WP_007369240.1\|5667781_5668540_-	CDP-diacylglycerol diphosphatase	NA	NA	NA	NA
WP_007369241.1\|5668664_5669654_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_007369242.1\|5669802_5670765_-	6-phosphofructokinase	NA	NA	NA	NA
WP_007369243.1\|5670964_5671849_-	CDF family cation-efflux transporter FieF	NA	NA	NA	NA
WP_007369244.1\|5672013_5673813_-	alkaline phosphatase family protein	NA	NA	NA	NA
5674026:5674068	attL	NA	NA	NA	NA
WP_071531956.1\|5674173_5674392_-	DNA-binding transcriptional regulator	S4TNZ3	Salmonella_phage	2.7e-33	88.9
WP_007369245.1\|5674472_5675624_-	phage late control D family protein	S4TRX8	Salmonella_phage	2.7e-164	76.8
WP_007369246.1\|5675623_5676100_-\|tail	phage tail protein	O64315	Escherichia_phage	8.7e-61	72.0
WP_081120898.1\|5676115_5678557_-\|tail	phage tail tape measure protein	S4TP64	Salmonella_phage	5.7e-241	70.5
WP_071531957.1\|5678549_5678669_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	3.3e-14	87.2
WP_007369251.1\|5678701_5678977_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	1.1e-36	87.9
WP_007369252.1\|5679038_5679557_-\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	8.2e-89	92.4
WP_007369253.1\|5679569_5680760_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	1.9e-205	89.9
WP_007369254.1\|5681164_5681458_+	chorismate mutase	NA	NA	NA	NA
WP_035941943.1\|5681462_5682272_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_007369256.1\|5682368_5682983_+	LysE family translocator	NA	NA	NA	NA
WP_007369257.1\|5683060_5684299_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_007369258.1\|5684759_5685197_-\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	4.4e-19	39.4
WP_007369259.1\|5685199_5686585_-\|tail	phage tail protein	F1BUP1	Erwinia_phage	4.3e-100	75.6
WP_007369260.1\|5686581_5687193_-\|tail	phage tail protein I	A0A218M4J3	Erwinia_phage	6.5e-93	83.1
WP_007369261.1\|5687185_5688094_-\|plate	baseplate assembly protein	A0A218M4K5	Erwinia_phage	7.5e-130	78.8
WP_007369262.1\|5688098_5688443_-	GPW/gp25 family protein	A0A0F7LDQ1	Escherichia_phage	1.0e-39	71.3
WP_007369263.1\|5688439_5689075_-\|plate	phage baseplate assembly protein V	U5N3F0	Enterobacteria_phage	1.1e-98	85.8
WP_007369264.1\|5689140_5689593_-	phage virion morphogenesis protein	O80313	Escherichia_phage	5.0e-50	69.4
WP_007369265.1\|5689585_5690053_-\|tail	phage tail protein	Q7Y4E0	Escherichia_virus	3.0e-66	80.6
WP_035941946.1\|5690142_5690565_-\|lysis	LysB family phage lysis regulatory protein	A0A218M4K2	Erwinia_phage	5.5e-43	69.9
WP_007369268.1\|5690564_5690996_-	hypothetical protein	A0A218M4L6	Erwinia_phage	1.9e-38	53.1
WP_007369269.1\|5690992_5691505_-	lysozyme	A0A218M4K3	Erwinia_phage	3.0e-75	81.2
WP_007369270.1\|5691488_5691725_-\|holin	holin	A0A218M4L5	Erwinia_phage	1.5e-10	51.7
WP_007369271.1\|5691715_5691919_-\|tail	tail protein X	A0A0F7LCN2	Escherichia_phage	8.6e-26	83.6
WP_007369272.1\|5691918_5692425_-\|head	head completion/stabilization protein	M1SNN6	Escherichia_phage	1.9e-61	80.6
WP_007369273.1\|5692522_5693281_-\|terminase	terminase endonuclease subunit	Q94MI7	Enterobacteria_phage	3.7e-82	67.3
WP_007369274.1\|5693284_5694457_-\|capsid	phage major capsid protein, P2 family	A0A0M4R4W2	Salmonella_phage	3.1e-128	61.6
WP_007369275.1\|5694493_5695351_-\|capsid	GPO family capsid scaffolding protein	A0A0M3UL81	Salmonella_phage	4.5e-108	75.8
WP_007369276.1\|5695528_5697298_+\|terminase	terminase ATPase subunit family protein	A0A0M4RE51	Salmonella_phage	5.7e-299	84.7
WP_007369277.1\|5697297_5698335_+\|portal	phage portal protein	Q6K1J0	Salmonella_virus	9.4e-161	77.9
WP_007369279.1\|5698690_5698945_-	hypothetical protein	NA	NA	NA	NA
WP_035942302.1\|5699323_5700034_+	hypothetical protein	NA	NA	NA	NA
WP_007369282.1\|5700458_5701490_-	histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	NA	NA	NA	NA
WP_007369283.1\|5701501_5702119_-	hypothetical protein	NA	NA	NA	NA
WP_035941951.1\|5702415_5704698_-	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	0.0e+00	82.3
WP_007369285.1\|5704687_5704963_-	DUF5405 family protein	M1TAP2	Escherichia_phage	4.4e-33	75.8
WP_035941954.1\|5704959_5705184_-	TraR/DksA C4-type zinc finger protein	S4TRY6	Salmonella_phage	4.7e-25	78.4
WP_035941957.1\|5705197_5705485_-	DUF5405 family protein	Q7Y4C1	Escherichia_virus	3.8e-27	71.6
WP_007369287.1\|5705484_5705709_-	DUF2732 family protein	Q7Y4C2	Escherichia_virus	1.5e-26	83.8
WP_007369288.1\|5705772_5706273_-	hypothetical protein	M1SV55	Escherichia_phage	2.2e-75	81.3
WP_007369289.1\|5706442_5706715_-	hypothetical protein	Q1JS20	Enterobacteria_phage	2.7e-43	91.1
WP_035942304.1\|5706850_5707144_+	helix-turn-helix transcriptional regulator	Q1JS21	Enterobacteria_phage	4.7e-33	73.2
WP_007369290.1\|5707213_5708194_+\|integrase	tyrosine-type recombinase/integrase	S4TP66	Salmonella_phage	2.2e-167	88.3
WP_007369291.1\|5708379_5708874_-	cell-envelope stress modulator CpxP	NA	NA	NA	NA
5708312:5708354	attR	NA	NA	NA	NA
WP_035889119.1\|5709025_5709724_+	envelope stress response regulator transcription factor CpxR	Q6XM27	Feldmannia_irregularis_virus	3.1e-06	30.3
WP_007369293.1\|5709720_5711094_+	envelope stress sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	4.2e-15	24.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018017

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP018016

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection