CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP012109	Myxococcus hansupus strain contaminant ex DSM 436 chromosome, complete genome	32 crisprs	csa3,cas3,DinG,RT,WYL,2OG_CAS,PD-DExK,Cas9_archaeal,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas6,cas8b3,cas7,cas5,cas1,cas2,DEDDh,cas8c,cas4	1	46	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP012109_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_1

272122-272234

Orphan

Consensus_repeat	Method
CGCTCCCTTCGCGCACCGGTTGCCTCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_1

>merge|NZ_CP012109|1|272122-272234|CRISPRCasFinder
CGCTCCCTTCGCGCACCGGTTGCCTCGGGGGCACGCTTCTCTCTGGGGCGGGCGCAGGGCCACGGGCCTCGTTTCGGAACGCGAGTCGCTCCTTTCGCGCACCGGTTGCCTCG

>NZ_CP012109|1|1|272122-272234|CRISPRCasFinder
CGCTCCCTTCGCGCACCGGTTGCCTCG	GGGGCACGCTTCTCTCTGGGGCGGGCGCAGGGCCACGGGCCTCGTTTCGGAACGCGAGT
CGCTCCTTTCGCGCACCGGTTGCCTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002633329.1\|275555_276113_-\|RNA-2',3'-cyclic-phosphodiesterase	unknown	unknown	gnl\|CDD\|274058
NZ_CP012109.1\|WP_002633338.1\|266131_267337_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380570
NZ_CP012109.1\|WP_044890577.1\|276279_277512_+\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NZ_CP012109.1\|WP_002633323.1\|279191_279866_+\|DUF4336-domain-containing-protein	unknown	unknown	gnl\|CDD\|372974
NZ_CP012109.1\|WP_049872216.1\|271130_271886_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044890576.1\|281339_281585_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002633336.1\|268256_269321_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119323
NZ_CP012109.1\|WP_044890533.1\|272716_274786_-\|putative-metal-binding-motif-containing-protein	unknown	unknown	gnl\|CDD\|338048
NZ_CP012109.1\|WP_021781433.1\|281817_282708_+\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|197318
NZ_CP012109.1\|WP_021781434.1\|274840_275458_-\|YiiX-family-permuted-papain-like-enzyme	unknown	unknown	gnl\|CDD\|236642
NZ_CP012109.1\|WP_002633340.1\|264955_265273_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044890532.1\|279846_280593_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|274678
NZ_CP012109.1\|WP_044890534.1\|269317_270202_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223488
NZ_CP012109.1\|WP_082282663.1\|262173_263625_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012109.1\|WP_002633334.1\|270198_270954_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP012109.1\|WP_002633343.1\|261766_262066_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002633337.1\|267336_268257_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223633
NZ_CP012109.1\|WP_002633325.1\|277582_279016_-\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236327
NZ_CP012109.1\|WP_044890531.1\|280664_281294_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002633341.1\|263679_264558_-\|YsnF/AvaK-domain-containing-protein	unknown	unknown	gnl\|CDD\|378207

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002633329.1\|275555_276113_-\|RNA-2',3'-cyclic-phosphodiesterase	gnl\|CDD\|274058	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase. This protein family consists of bacterial and archaeal proteins with two tandem copies of Pfam domain pfam02834. Members for which activity has been measured perform a reversible, ATP-independent 2'-5'-ligation of what is presumably a non-phyiological substrate: half-tRNA splice intermediates from an intron-containing yeast tRNA. The physiological substrate(s) in prokaryotes may include small 2'-5'-link-containing oligonucleotides, perhaps with regulatory or biosynthetic roles. [Transcription, RNA processing].	1.40306e-40
NZ_CP012109.1\|WP_002633338.1\|266131_267337_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380570	cd06347, PBP1_ABC_LivK_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems that are predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); however, its ligand specificity has not been determined experimentally.	3.79677e-166
NZ_CP012109.1\|WP_002633337.1\|267336_268257_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|223633	COG0559, LivH, Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism].	2.62074e-73
NZ_CP012109.1\|WP_002633323.1\|279191_279866_+\|DUF4336-domain-containing-protein	gnl\|CDD\|372974	pfam14234, DUF4336, Domain of unknown function (DUF4336).	1.9749e-16
NZ_CP012109.1\|WP_021781433.1\|281817_282708_+\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|197318	cd09084, EEP-2, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; uncharacterized family 2. This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds; their substrates range from nucleic acids to phospholipids and perhaps, proteins.	2.27735e-37
NZ_CP012109.1\|WP_002633336.1\|268256_269321_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	2.09317e-72
NZ_CP012109.1\|WP_044890533.1\|272716_274786_-\|putative-metal-binding-motif-containing-protein	gnl\|CDD\|338048	pfam11617, Cu-binding_MopE, Putative metal-binding motif. The seqeunce of structure 2vov is not matched in any other sequence either in UniProt or in NCBI (Sep2014). The model is of a short repeat not found on the G1UBC6 - 2vov - protein. The presence of conserved cysteine residues and the lack of hydrophobic residues suggests that this repeat might be a metal-binding site, perhaps for zinc or calcium ions.	3.32191e-11
NZ_CP012109.1\|WP_021781434.1\|274840_275458_-\|YiiX-family-permuted-papain-like-enzyme	gnl\|CDD\|236642	PRK10030, PRK10030, YiiX family permuted papain-like enzyme.	2.90102e-90
NZ_CP012109.1\|WP_002633325.1\|277582_279016_-\|proline--tRNA-ligase	gnl\|CDD\|236327	PRK08661, PRK08661, prolyl-tRNA synthetase; Provisional.	0
NZ_CP012109.1\|WP_044890532.1\|279846_280593_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|274678	TIGR03613, RutR, pyrimidine utilization regulatory protein R. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the TetR family of transcriptional regulators defined by the N-teminal model pfam00440 and the C-terminal model pfam08362 (YcdC-like protein, C-terminal region).	1.9707e-14
NZ_CP012109.1\|WP_044890534.1\|269317_270202_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223488	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	3.3051e-121
NZ_CP012109.1\|WP_082282663.1\|262173_263625_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.4375e-91
NZ_CP012109.1\|WP_002633334.1\|270198_270954_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	4.42795e-124
NZ_CP012109.1\|WP_044890577.1\|276279_277512_+\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	8.20212e-70
NZ_CP012109.1\|WP_002633341.1\|263679_264558_-\|YsnF/AvaK-domain-containing-protein	gnl\|CDD\|378207	pfam09557, DUF2382, Domain of unknown function (DUF2382). This entry describes an uncharacterized domain, sometimes found in association with a PRC-barrel domain pfam05239 which is also found in rRNA processing protein RimM and in a photosynthetic reaction centre complex protein). This domain is found in proteins from Bacillus subtilis, Deinococcus radiodurans, Nostoc sp. PCC 7120, Myxococcus xanthus, and several other species. The function is not known.	1.24945e-30

>NZ_CP012109.1|WP_049872216.1|271130_271886_+|hypothetical-protein
MPMSPLSRLVASLATLSLLSAACAGMQKPENQEASSTIEEVPNEGGDAVPAVQFNVLEAPEGFTVKLPPMETPIEPTRTEAALPKRTDKATLVTYSATKDGVSYIVNSVDYPEAFVATVPAEALINGGIQGIAQQVSGELKSSEDITLDGYPGKAYMLASPSGEVKGRSFLVGPRVYNLITVYNAAIGAPGADEFLNSLTLINPPPQVERPAPADADAGTDAGTDAAATDAAGGEDAGTAPDAGARKRRAK
>NZ_CP012109.1|WP_002633334.1|270198_270954_+|ABC-transporter-ATP-binding-protein
MSDAHVKTLGERQAFPPLLSVDGIKVHYGAIQALKGVSLTVGKGEVVALIGANGAGKTSTLRAVSGMLKPSAGRIQFNGHETTSMKAHQLVPRGMAHAPEGRGVFPNMSVQENLELGAYLRKDTAGIQADLEKSFTLFPVLKERRKQMAGTLSGGEQQMLAIARALLSKPQLLLLDEPSLGLAPQVTEAIFRTLREVNATGVSVLLVEQNAHLALNAAHYGYVLETGEVVMAGPGKALLESAEVRRAYLGE
>NZ_CP012109.1|WP_044890534.1|269317_270202_+|ABC-transporter-ATP-binding-protein
MSALVQETKAEAGAPMLQADGVSIQFGGLKALTDFNLTVRQGDLLGLIGPNGAGKSTAFNVLTGVYQPTQGEVRVAGQRVNGWLPHQINHLGLARTFQNIRLFRALTALDNVKVACRAQGALHPEGVGLGAKVKGAFANYRDWWRALLLTPRFQHEERELTRQAEHLLEVMGLFHRRDEEARNLPYGEQRRLEIARALGTQPKVLLLDEPAAGMNTREKADLMVLIRKLRDDFNLGVLVIEHDMKLVMGICEFITVLDHGETIARGAPAQVRNDRKVIEAYLGDSYLESHGGAA
>NZ_CP012109.1|WP_002633336.1|268256_269321_+|branched-chain-amino-acid-ABC-transporter-permease
METPAIPAPEAGSAVPASLRGILPVMLALPVLALFQWLMSDAPFASYLLSVVGVNIILAVSLNIVNGMTGQFSIGHAGFMAVGAYIAGVMSLNLKEVALSFLPVAASDQVFFVASLLVGGLAAALCGFLVGLPSLRLRGDYLAIVTLGFGEIIRVVVQNTDAFGRALGLSGIPQTSTPAMVYFWVFLTVLVARRITGSSHGRSLWAIREDEVAAEAMGVDTTGYKVRAFVISSFFAGIAGGLFAHFVPIINPGSFTFVKSMEIVVMVVLGGLGSTTGAIVAATFLTLLPEGLRSLFSVLGAEGSLAQRVDQIRMPVYGLLLVVLMLARPQGLFGTKEIWDVLPRWIPRKRKGLA
>NZ_CP012109.1|WP_002633337.1|267336_268257_+|branched-chain-amino-acid-ABC-transporter-permease
MAQLLQHLINGLAAGTIYALVALGYTMVYGVLKLINFAHGDVMMVGVYMGYATAFALGRDMRSSLLGVAVVFAVAMLGCALLGFIIERFAYRPLREKPRLTALITAIGISFALSYGFQLDIGFLPGAAPRAFPEVIEPVEWLVIGDRDVVVWNWQVISFGIAVTLMVGLQFLVFRTRFGRAMRAVSWDHRVAALMGIPTDRVIALTFMLSSALAAGAGLLYAIKDTSVSPLMGLYVGLKAFVAAVIGGIGHVPGAVIGGLVLGLVEEFVVGYAASTWRDAVAFGFLILVLLVKPGGLFGRVAAEKV
>NZ_CP012109.1|WP_002633338.1|266131_267337_+|ABC-transporter-substrate-binding-protein
MRRLAPMLLAALAVMAAACEKKTQPAPSGEGGSQAAQGQGAAPGGAPADANTILLGQVGSLTGGQATFGISTRNGIELALKEANAAGGVKGKKLAIRVYDNQSKPEEAAQAATRLITQDKVALILGDVASSNSLAMAEKAQAAGVPMITPSSTNPTVTDKGDYIFRVCFIDPFQGFVMAKFARENLKLNKVAVLQDNKSAYSIGLADVFTRKFTEMGGKVVAVESYSQGDTDYRAQLTAIRKSQPEGIYVPGYYSEVGIIARQAREVGLKVPLMGGDGWDSEKLFELGGSAISGSYFSNHYSPDNPDPRVQKFIADYKAAYGAVPDALAALGYDAARVAVAALERAKDLSGPAVRDAIAQTKDFPGVAGTVSLDANRNAVKSAVVLKVEDGKTQYVTTINP
>NZ_CP012109.1|WP_002633340.1|264955_265273_+|hypothetical-protein
MGGAAVGIGAHLVATGVHWLLRPGLRGPVVGVACASGLLGALVAGRLARRRARVPALALVSTSPPAAVCAPREEAEAPPRPSVERVLRRGPSGREQPWFETTAPA
>NZ_CP012109.1|WP_002633341.1|263679_264558_-|YsnF/AvaK-domain-containing-protein
MYQRSDIKEGMVVRSIDGEKLGKVFAVGEGEFHIEKGLFFPKDYLVRYSEISRIDGAEIILSHGKEMLSRLSDEGRADTLAGTGAGAGVGPGAVGLDTDRATARSRAGIDTSADTVSRGTYDTGYDTRLGKEARYGAGLDTDTAVGARGLHGREEDITIPVHKEEVDVLKRDVQAGEVRVHKDVVEEDQEIDVPVRRERVRVERRDVSPGRPAMNASFQEETVVVPLRAEEVEVQKRAVVSEEVVIHKDEIDEERHISEHVRREQVDVRTEGSDERPRTLNAPTDDPLKRGY
>NZ_CP012109.1|WP_082282663.1|262173_263625_+|serine/threonine-protein-kinase
MSVHRMADVILEDCLERGLDLDSGLDVFLTQCARLVHAPAGFVSLRGTRGPVVTRVLGEPGVDVQQAAFWQGIRKLDDGRTLFCTRLALGSLELGGLGLVAEGRFEDGGRMVMKLVEAIGEQLDTAVLGFLALTGGKSALERLDGLAADTPPPSRGHIGRYEVVTPLGTGGMAQVLVARTRGPEGLGRMVALKRILPHLSSDPSVVEQFLDEARIGLRLAHPNLVHVYDFGEAEGAYFIAMELVRGVDLERLIRAVRGPLEPAHAVAVVCQGLMGLQAAHSLLGEDGAPLELVHRDMSPHNLMVGFDGRVKVLDFGVAKARAQRTVTLPGIVKGKPLYMSPEQARGMKLDARSDLFSMGLILYQALTGVRAFEKPDELATMHAICDEALPSRPSHISRSLWSVLRTALAKRPEARFGSAEEMAERLADACRPASDSELVQLMLKHFPDRNREFERLERSPPAGPLGSADETPIMRPVRLKTPG
>NZ_CP012109.1|WP_002633343.1|261766_262066_+|hypothetical-protein
MDVTEGIVMSFITAMVVGVPLFGLTLRFCLKPLVEAFIRLKEVPQGGGVDVQLLRERVAYLERVMEAHGLIEDRVPLALRTGSPERLPAVSAVKDRERV
>NZ_CP012109.1|WP_044890533.1|272716_274786_-|putative-metal-binding-motif-containing-protein
MRRILVLLPLLALAGCKKDESPGAVKVTVNYSGFLPGCVLVKARDEASGRELSTPVPGKGSRPQGGSLVAAVIAPSDWGSSVRIEAFAHEQSCETGTPVVNSSALATLTPGESVPVTLSLQATDADGDGYVSVLTGGTDCNDNNAAIHPGAVELCNDVDDNCNGISDQVELSLGQSCTEGENCPGTRACGQDGGVICNAPAPVYAYPDRDQDGRGDMHAEAVAFCAGIGAGYVLGPADDCDDTNPSIRPGAPELCNGVDDNCDGNIDETFPLLGTACEAAGQCPGTQVCDAAQTGTTCEATIPPSNWYVDEDGDGFGSGTAVTTCVSPGAGYVNQGDDCNDGNPFTHPGATEICDGLDNNCDGTSDGPGVCPEAGASFVSRLVGAPERQWRSIVSETPGDVTVVGNMGGVAVLTPGSTTFQLSPAGSGCGNNDPGYNAVWTDMANLGRAHMGSSSSGLLRYFVRSENACTQAHQLNNVVQGLVGFRHNGELEIHGVTSTFANNQGVTFAWNGGTGAASLTFWPSTVAPLYDVHGRSRAALFAVGGFDTGNTRPRIYRYTDGNSPWQTEDVQSTISNLGKLLGVWVVNDKLAFAVGDFHSGSNSVVRWDGSRWSRMPFPNTYNESLTSVIAFGANSVYVTALNGRVYRYDGTQWQIIHENTSARFRDIAGTSPADLWIAGENGQIFHWPQ
>NZ_CP012109.1|WP_021781434.1|274840_275458_-|YiiX-family-permuted-papain-like-enzyme
MRWLIMLWVWLGAHDAVAAPREDLEARLQTGDIVLHTSRSAQSQPIQQATQSPLSHVGIVEVTEQGAWVVEAVQPVQRIRFSKWKARGVKGAILVLRPQALSEAQRQHAVAAAKAHLGKPYDWRFEWGDDAMYCSELVRKAYAQGAGVEYGKMERLDSLRVKGLEQQLRERYGKRVPSDLELVTPASIATDTRLDVVYSDFPSVR
>NZ_CP012109.1|WP_002633329.1|275555_276113_-|RNA-2',3'-cyclic-phosphodiesterase
MRLFTAVTLGDTVEARAAARMQHLRVLAPRARWVKVEGLHLTLVFLGDVDGARLPAIQEALTPVGTRHAPFALSVEGGGAFGDPEHPRVLWADVRGATDALKALQADTARVLQPLGFEPEHREYTAHLTLARAREPRGDPALRSCVQALSQTTLGEARVERLILFESKGGHYLPRWEVPLSREPG
>NZ_CP012109.1|WP_044890577.1|276279_277512_+|adenylate/guanylate-cyclase-domain-containing-protein
MPKRMQVDETLQKRLNGWRAQVGEWLNRVRVAGTASWWAVAWLDDWRVPSWALAAYVLLAFALWAGARRLPALGRRPALGVTLIDMPAVCALQWLSIQGSPAPGVTALLTLGVFISLVVIVALLTLSRRYVVIATLMAIGLEGWLLFQARLTPDTFLTGMVLVLTLAALAASFIGRQVMGLVKEVAQEELQRERLGRYFSPEVARQIAERGTDAGSGEHREVTLLFSDIRGFTSMSERMDSPHVVALLNEYLSRMVEVVFRHGGTLDKFIGDGILAYFGAPLELPGHPKAAVACGLAMLEALEALNAERERRGEEPLRIGIGIHTGRVVVGDVGSEQRREYTVIGDAVNLASRIEGLTKKVGVPMLVSGATQAQCAEAFQFEPAAPLPVAGKAEPVATFLPRGAAVRVAG
>NZ_CP012109.1|WP_002633325.1|277582_279016_-|proline--tRNA-ligase
MAEKLTPREKGFSEWYVDLVQKAKLADYSDVKGCMVIRPNGYALWENMQRVLDTKFKELGHKNAYFPLLIPESYLKKEAEHVEGFNPQLAVVTHAGGSKLEEPYVIRPTSETIINRSFAKWIQSYRDLPMLLNQWANVMRWEMRTRLFLRTTEFLWQEGHTCHETEEDAEKETRQMLEVYRAFAEDYMAMPVMTGQKSESERFAGALRTYSIEAMMQDKKALQAGTSHNLGQNFAKAFDTQFQGRDGKMHHVWQTSWGVSTRLIGGLIMTHSDDAGLIVPPKLAATHVVIIPIFGKASDAEKAQVLEKTNALAADLRKAGLGVVLDDDDSKSPGFKYNEHELIGTCLRIEVGPKDLAKNSCVMVRRDLRQKEFVSLDEAVSKAQAMLDAMQSDLFNKAKSFRDSHTFEVNSYEELKEKADQGFLLAHWNLDPKVEARIKEETGLTTRCRPFDLKQEPGKCVVTGESSPGRIVFSKAY
>NZ_CP012109.1|WP_002633323.1|279191_279866_+|DUF4336-domain-containing-protein
MFRQVAEGVYVFTVQFQMGVMDLGGRMTAVRLPDGGLWLHSPVRFSPEARAAVDALGPVRFLVAPNLMHHVSLGDWAEAYPDAKVAAPAGLRRKRSDLRIDVTLGDTAEAAWAPVLEQVFVQGMPKLDELLFFHRPSRTLLVTDLAFNIHQTGSWFTRLYLKMNRAWQRLSPTLLTRSLVKDREALRASLARVLAWDVERVVVCHGDVLEQGGQEAVRDALARL
>NZ_CP012109.1|WP_044890532.1|279846_280593_+|TetR-family-transcriptional-regulator
MPSPGSSGGGGRRAAPGRRRAPAVPAAPAPGVVASSSSEPSEREARKARRQEGRRQAILAAARAVLVQGGVLGLTLEAVAAEADLSKPSLFYYFRSKEDLVGALAVEGLAREVKVLEAAVVSAASGVEALAALVRARVDLYAEDLDGFRVVYLWPQLVGRQSEAHQARVLALSGQLNDVLEARLQADARAGRLAPGLQPRRLANVAWATAQGVLSLVAGLEHSGVGTRYTLSQLRDEACAVLLRSGGR
>NZ_CP012109.1|WP_044890531.1|280664_281294_+|hypothetical-protein
MRSFLASLGVAGVVSACLVSGSALANSAGISGRSGRDGSSLTCAECHTGGGAAPTVTIEGPATLAPGATGNYSLIIRGGPAAGAGYNVAVSEAAATLTAGSGSRKLSGELTHSTIRRFSNGEARFDFTMVAPATAGRVTLFGAGNSVNDNGTEQGDSSATTTLEVNVTGGGSGGGDGDGNDDGGCAAAGGVPLLGAALVLLSTRLRRRR
>NZ_CP012109.1|WP_044890576.1|281339_281585_-|hypothetical-protein
MAALPVALIPLGLRSYRSRRRARRPAPLRSAVGLGLVSLAILRLAGDSRLKSRLPTNWRQRLPSFDAFLPEEFTASVASGH
>NZ_CP012109.1|WP_021781433.1|281817_282708_+|endonuclease/exonuclease/phosphatase-family-protein
MRLRHLLPVLFLMGPLACATGPGHRAATVTDAAVQRAPGELRVMTFNIQSGARGLERVAQVIRAAVPDVVALQEVDVGSTRAKGLDQTAELSRLTGLKYRAHFRTTDLFGGAYGIALLSRFPLEALAQYPLPVPSGAEPRTLAHAVMEVDGREVSVYLTHLIRRPFNGNTRMRQSAYVARLLAQDTRPKLLMGDLNDGPDSRSTRLLRRGLRDVVAETGSVGGTYPLPAFLPTLRIDYVLACDSFTPVASRVLRVDVSDHYPVVADLRLKLDAVAKRDGPAVAESDAAGRITGAAP

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Crispr_ID: NZ_CP012109_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_2

368899-368989

Orphan

Consensus_repeat	Method
GAGACCCGCCGCACGACGATGCCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_2

>merge|NZ_CP012109|2|368899-368989|CRISPRCasFinder
GAGACCCGCCGCACGACGATGCCCGTGCGGCCGGAGACGCGTTCGGCCGAGCGCCTCGCCAAGGAAGACACCCGCCGCACGACGATGCCCG

>NZ_CP012109|2|2|368899-368989|CRISPRCasFinder
GAGACCCGCCGCACGACGATGCCCG	TGCGGCCGGAGACGCGTTCGGCCGAGCGCCTCGCCAAGGAA
GACACCCGCCGCACGACGATGCCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002633241.1\|370541_372791_+\|fused-MFS/spermidine-synthase	unknown	unknown	gnl\|CDD\|223498
NZ_CP012109.1\|WP_044890517.1\|359514_360600_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP012109.1\|WP_044890565.1\|363153_363657_+\|Rieske-2Fe-2S-domain-containing-protein	unknown	unknown	gnl\|CDD\|239550
NZ_CP012109.1\|WP_044890515.1\|373315_374281_+\|HPr-kinase/phosphorylase	unknown	unknown	gnl\|CDD\|235459
NZ_CP012109.1\|WP_044890514.1\|375963_376641_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044890566.1\|361025_362360_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368653
NZ_CP012109.1\|WP_049872444.1\|382379_383792_-\|fibronectin-type-III-domain-containing-protein	unknown	unknown	gnl\|CDD\|365830
NZ_CP012109.1\|WP_144429694.1\|376664_377639_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002633251.1\|356981_358598_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368175
NZ_CP012109.1\|WP_002633252.1\|354877_357010_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP012109.1\|WP_002633242.1\|369684_370467_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP012109.1\|WP_144429696.1\|384197_385604_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_144429695.1\|380607_382014_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002633245.1\|363800_365492_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NZ_CP012109.1\|WP_002633240.1\|372803_373154_-\|histidine-triad-nucleotide-binding-protein	unknown	unknown	gnl\|CDD\|238607
NZ_CP012109.1\|WP_002633250.1\|358612_359518_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238564
NZ_CP012109.1\|WP_002633238.1\|374277_375141_+\|RNase-adapter-RapZ	unknown	unknown	gnl\|CDD\|235450
NZ_CP012109.1\|WP_082282664.1\|353902_354577_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238017
NZ_CP012109.1\|WP_044890518.1\|353697_353994_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002633247.1\|362356_363121_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380178

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002633241.1\|370541_372791_+\|fused-MFS/spermidine-synthase	gnl\|CDD\|223498	COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism].	9.9181e-08
NZ_CP012109.1\|WP_044890517.1\|359514_360600_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	2.53273e-68
NZ_CP012109.1\|WP_044890565.1\|363153_363657_+\|Rieske-2Fe-2S-domain-containing-protein	gnl\|CDD\|239550	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes. The Rieske domain can be divided into two subdomains, with an incomplete six-stranded, antiparallel beta-barrel at one end, and an iron-sulfur cluster binding subdomain at the other. The Rieske iron-sulfur center contains a [2Fe-2S] cluster, which is involved in electron transfer, and is liganded to two histidine and two cysteine residues present in conserved sequences called Rieske motifs. In RO systems, the N-terminal Rieske domain of the alpha subunit acts as an electron shuttle that accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron in the alpha subunit C-terminal domain to be used for catalysis.	9.30961e-14
NZ_CP012109.1\|WP_044890515.1\|373315_374281_+\|HPr-kinase/phosphorylase	gnl\|CDD\|235459	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional.	1.02634e-147
NZ_CP012109.1\|WP_044890566.1\|361025_362360_+\|hypothetical-protein	gnl\|CDD\|368653	pfam05887, Trypan_PARP, Procyclic acidic repetitive protein (PARP). This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.	9.37537e-05
NZ_CP012109.1\|WP_049872444.1\|382379_383792_-\|fibronectin-type-III-domain-containing-protein	gnl\|CDD\|365830	pfam00041, fn3, Fibronectin type III domain.	0.00720543
NZ_CP012109.1\|WP_002633251.1\|356981_358598_+\|hypothetical-protein	gnl\|CDD\|368175	pfam04885, Stig1, Stigma-specific protein, Stig1. This family represents the Stig1 cysteine rich plant protein. The STIG1 gene is developmentally regulated and expressed specifically in the stigmatic secretory zone.	3.32314e-13
NZ_CP012109.1\|WP_002633252.1\|354877_357010_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.04355e-49
NZ_CP012109.1\|WP_002633242.1\|369684_370467_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	1.55655e-90
NZ_CP012109.1\|WP_002633245.1\|363800_365492_+\|FHA-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	2.90317e-33
NZ_CP012109.1\|WP_002633240.1\|372803_373154_-\|histidine-triad-nucleotide-binding-protein	gnl\|CDD\|238607	cd01276, PKCI_related, Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides. The members of this subgroup have a conserved HxHxHxx motif (x is a hydrophobic residue) that is a signature for this family. No enzymatic activity has been reported however, for PKCI and its related members.	1.49491e-54
NZ_CP012109.1\|WP_002633250.1\|358612_359518_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238564	cd01144, BtuF, Cobalamin binding protein BtuF. These proteins have been shown to function as initial receptors in ABC transport of vitamin B12 (cobalamin) in eubacterial and some archaeal species. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).	2.83879e-43
NZ_CP012109.1\|WP_002633238.1\|374277_375141_+\|RNase-adapter-RapZ	gnl\|CDD\|235450	PRK05416, PRK05416, RNase adapter RapZ.	1.30124e-156
NZ_CP012109.1\|WP_082282664.1\|353902_354577_+\|FHA-domain-containing-protein	gnl\|CDD\|238017	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).	1.13272e-15
NZ_CP012109.1\|WP_002633247.1\|362356_363121_+\|hypothetical-protein	gnl\|CDD\|380178	NF033170, lipo_LIC13355, LIC_13355 family lipoprotein. Members of this family are lipoproteins found broadly in the genus Leptospira.	2.71024e-11

>NZ_CP012109.1|WP_002633245.1|363800_365492_+|FHA-domain-containing-protein
MWQIIINGPGYFDTSYDLPEGVTSLGRADENDIVLGGDLVSRRHARLYVDGDVLRIEDLGSRNGSRINGAPLQGSKQLVAGDSVALGENTLSVRQPNTVENAATEMVDLSAGGVVRFGHGQDVGGSVLLAKNVRDADVLRLLDNVGPVSFDDSFSSATSAPLPAASPRVGQETLVLLFRIAEALSSATTLSSFLDTTMDRLLERTEATTAVVLLRHSVGALVPAAVRHRGRLAQGEVPVSDAIVEESLRQGRAIAVGDVRDDRRFASRESVILYGVDRVLCIPIGTEPPYAGVLYVNTSAKGDSSVEVMLDACTAVAHLVATGVQKFAPRETGTVADRLRRDLERFHPPDVAERRAAEAQRQGGKLPGLEERNLTILHAELVGFSVLAMRIGAARATQMLNDFHARMSGIVYSFEATVEGFRGESLRALFGVPYAKGEDSVQAVRAALALRADWERAMSRRPLDERCELRIALHSTRALVGMIGAESRSDYTVVGEGVSVASWLAGTASPGQVLITGKVLATVGARFDVQPLGERLLRPPKDKVAAFEVIEEDVGQLTNPGLR
>NZ_CP012109.1|WP_044890565.1|363153_363657_+|Rieske-2Fe-2S-domain-containing-protein
MKGEVDRRAALRTLLEGTCALAVLGTGCGDGWREAIVLDPPDAGGPGASCDDAPVPGGPEDGWVEVPLADHPALQVPGGAAAVRIPQALLDVVIVHTSQGCYAALWRICTHGDCAVDWVPEDRVMECPCHGSRFSQDGQVLNGPATRPLATFQVVRRGASLFLRRPR
>NZ_CP012109.1|WP_002633247.1|362356_363121_+|hypothetical-protein
MSRRLGQRFPWGTALAVLLGTAACGDGASIVDEDAGTDPVQDDAGQPDGSTTLEPDAGLKPADPYADEVVSFTPGPSAGFGQDRFPDVVLGPPSGLGADTGSLDVLSLGRGGSIVLRFTDIAVVDGPGVDLLVFENPFHIAGGPNVYSERGIVSVSDDGVTWFAFPCATTDAAGGYPGCAGVAPVFANPANGISATDPAVAGGDGFDLATVGLSRARYVRIVDAGNNRYGGTSGGFDLDAVAVVNGVSLGSATP
>NZ_CP012109.1|WP_044890566.1|361025_362360_+|hypothetical-protein
MFATASLVLAVATTGCGSECVDAFDCRSENGAAPEGQQWSCVAEKCETRPIQQVPEEDAGTEPEPDSGTEPEPDAGTEPDAGTEPDAGTEPDAGTEPEPDAGTGLPCEVATHDPVLGTLQLGASFVAAGSAALPEDVLALATSPGPVYTVYAVRGSSMGVDLGMFSLGIWPELQTDGTKLFDVVSPADRAGTATVFSNGYLVNDGQRLFAGYTTSATGAPGSVAMYDLATPASSSYLSSQANYSAASFVSGATRMVLVNGFSLESTTDGMGIYGLVTSEEPFQTARLAQFPAGEAGASGFTAVADNGIAFLGYSSSVDYSNKGRVVAPVVLTAALSSGTPVDLGTQPEVVVGSDFNATSGFGNGVVVKRGGYDENWAFVSTDVSRYALSLGGEPSEVAIGERTPVLTFADQCTSVKQLSNMGPDLLVAIEDKNGQRLVRIQEAQ
>NZ_CP012109.1|WP_044890517.1|359514_360600_+|iron-ABC-transporter-permease
MSEPAASRRTHGGAGGFRASRAAMLFGGFFVLAVGCLAVAMRFGEQSISLAAALTEPDSTDAVIFWSLRLPRALLGAIVGAGLAASGATLQGLLRNPLADPFVLGVSGGAALGATLALAVGLATVGEVAPGLGGAMARLSAPALCSFLGAGAAILFVLSASRGPASRAPYAALLTGVVFNAFASAAITLVKTLSDPDRLGEILYWLAGALGYERGATLVLSALLQAVAIGVMWALSARLNLLSLGDDDAASLGVPVAATRRWLLLASSASVAGAVALTGLIGFVGLIVPHLLRLAFGPDQRLLVPLSALGGAAFLVLSDLLARLAFPLFGAEPPVGVVTALLGGPLFLALLRRRVRLGTSH
>NZ_CP012109.1|WP_002633250.1|358612_359518_+|ABC-transporter-substrate-binding-protein
MPMTTMTSRSRSGVPVLLVAVLCLFAGPVEAAEQATSSSLRTLGPPAPAKVRRVVTLAPSLSEMVLALGAGGTLVGVSRFDEAKAVAKLPRVGGFTDPSVEAVVALKPDLLLVQPGPGNQRPVEKMAELGVPVLLLPLHSVQDVLAALRAVGQALGKQTEADAIVSGIEATRARIREAAKKLPAPRVLFVYGFEPLVVAGPGSFADELLRDAGGINVAADAGSAYPVYSVERVVRARATVVVDAADVDVGKDKLRALPGVSGARWVDLPSLALLQPGPSLGQGLEELFRLLHPEGAGKGAP
>NZ_CP012109.1|WP_002633251.1|356981_358598_+|hypothetical-protein
MPRPHPLSPESFLPTLLLAATAALFFTGCPEEGAVCTSGLSVCGEACVDLRGDAANCGACGTTCGDGQTCEAGACGCRPGTESCGGACVATANDVANCGACGNACDAGLVCESGVCREGCSEGSLRCGDSCVDVRSDVLNCGACGTVCPDVQSCHEGRCGYDVVAACYTNGQLVGIQAGTDRLGPRRQFGSGVQTLASWDGYVLAADATASKLLQASAGALGTVVEEGSLGGVAGSPNDILVDPPYVYVVDSVNNTLQVLKREGPTQGAGLGLRTVTQVNLGANTSPQALAKWGTTLYVPLFGTGGSMFQFGNAVARVDISNPEQPRKVDTISLTGLDLKPFDGGTVLPLPYSVAATSTGVYVALTNLNPYNGYRPNGPGMLAKINPADGSVSAIDLGATDCLNAGYVEAVGDQLVVACLGESEYDEANGHSASSVRATGLVLVKDDAPVAAYALRVGCEPGTPGCHISVASRFAVSEGAVYLADTNAGRVFVVAVEDGRLVERRGFSSPQAVGPALEACPVDPRRPVSNAIDVTALN
>NZ_CP012109.1|WP_002633252.1|354877_357010_+|TonB-dependent-receptor
MRWTFLAGPVVCLALSLPRPAGAQPSEAEATPPSVDAAEEAPKPPTQAGTSAEDSPAPEATPAVDTSSADATPARTTVVRGRTPPPPESPERRDPTGAITVIDARERAGEARDTAELLVGSVGLAVQDSGGYGQSKSLVVRGASSNGVLVFLDGIPLNGAGGLSDLSLIPAALVERFEVLRGGAGARYGSGGLGGAVNIITRAPGPNLRTSGEVTYGSWNTALGHVAATGPLLGGQALVLVHGGRSDGDFAYDVDDLPAVDGNPPVTERRARNNAQGGGALLRYRRRLAGGSRLDALAELSVENRAIPGTVQNPQSTGDQELGRLALGLRWFGVLDGLGQGSARGFFRRDALEVTGRIPGAGGAQRHSVGGVELEGRRPLGEHQSLTVTVATSGESVTQAENAQAAAWWRASVMAMDELRLFDGVLDVVPSMRLERVGPYWLLSPKLGASVELGRGFGLRANAGQSHRAPSFLELYIRQGTLLPNPGLKPERALYADAAAMWRSGRVSREDETPRWSVTAGGFAALYENLIAYELYPPLMARPYNFDTARVWGLELEGEARPFPWLLASTGYTWLRTENRYGDPRFFGKDLPNRPRHKWVGRVRAGPDWLNGRAEVLYQSAQLINRTGSLDLPSRTLVSAGASSTFLHKPEVTVSVELKNLLDVRTFDFTGFPLPGRAVYVTLAMALEPGASSTATPPHEPHASPASPVP
>NZ_CP012109.1|WP_082282664.1|353902_354577_+|FHA-domain-containing-protein
MFLRIACPRTRSPTRAWCVKTRGHPTCRRPEWVFVPRAPHRIRATEGLAGLEPHAHVARVHPDSTGRVRVSKTAQCDTRTREVSWPVLLWELGASASRAGGAKPRVTDPIVLELRPRLGATASEVTLGRGAECDIVLAEPSVSRLHARFRREPHTGLWSVTDLESERGTYQDGVLILPGRPALLLCRSRLTLGNVELLFLQTYAAEQSVRASWTPSPVRLTRRR
>NZ_CP012109.1|WP_044890518.1|353697_353994_+|hypothetical-protein
MSRTVFAAQALRGGARWSVKQLLVVSLAAWGGGCAVEDPVARLRGADAGTGSFSDEDEEAQGVWLESGDVPPDCVPPDAEPDSGVVCEDAGTPDVPSP
>NZ_CP012109.1|WP_002633242.1|369684_370467_+|ABC-transporter-ATP-binding-protein
MEPLLSTRALVAGYGTRPILHGVECEVRPGELWAVLGPNGTGKSTLLRAVLGMGPWTRGEVRLLGQARGDWAPRALAQKVAWVPQTFESAEGFSGLELVLMGRSPHLGLWGLPSAGDVALAHEVMSELGIAHLAERSAEALSGGERRMLMLARGLVQRPELLLLDEPTAFLDVAHQVGALDRVRARVDAGLGAVAVLHDVNLAAAFATHVLLLRDGRVLARGPSVEVLERDALETLYGLPMETALAPSGARLFAPRAPPR
>NZ_CP012109.1|WP_002633241.1|370541_372791_+|fused-MFS/spermidine-synthase
MSRYAIAIFASAFLLFGVQPLVGRYSLPWYGGTPGVWTACMLFFQAVLLGGYAYSHGLASRLAPRTQARVHLGLLAVAVAVLGARALLSGSPVAPGPEWRPEGTAFAVPRLLAMLAATIGLPFFVLSTTGPLLQSWFARARPGRSPYPLYALSNAGSLLALLGYPFLLEPWVGRGAQAWAWSVGFVFFAGACAVCALEVMKQPAEAPAPATAATPVTATPVTEDAGRGESFASGAPPTVRATMKWLGLSTCASVLLLATTNQLTQDVAAGPFLWVLPLAVYLLTFILAFSRESFYSRTVYAVLLIASGAGVAHAQTQGPQSSLVLQLVAYSGALFAGSMVCHGELYRLRPAPRYLSAFYLWVSVGGVLGGLLISVLAPALFTAYWEYPLALGACCVVALAGMAKQAGEDATRTQRLQQVLRGAMLLLVAGHLTYTMAREQGRARFASRNFFGVVRVMEQSVGDPEHHRFSLLHGAITHGFQHVAPERKSVATTYYTPEAGLGLAIAEQRRLREALGQPPGLNVGVLGLGIGTSAALLQAGDTGRFYEIDPAVIALARGEGGYFSYLRDTPAKVELVEGDARISLERELEAGVRGFDVLALDTFSSDAVPVHLLTREAVALYRAHLAPHGVLVMHISNVHLDLVPLTLSHARALGLHAALVVNETKGDALRSNWMVLSPDREFSWGPTFTQATSRVRRLGLRSEPDFTWTDEKSSVLHVLRRGTGPAASVKDVEASSGPSAPVTAEPAAE
>NZ_CP012109.1|WP_002633240.1|372803_373154_-|histidine-triad-nucleotide-binding-protein
MSDCLFCKIRDGLIPAKVVYRDDECLAFEDINPQAPTHVLFIPRKHIATVNDISPEDRTVVGHLFTAAAKVAEERGHAAPSSGYRLVMNTHAHAGQTVFHIHLHLLAGRPLGWPPG
>NZ_CP012109.1|WP_044890515.1|373315_374281_+|HPr-kinase/phosphorylase
MKSIRISQLLEDHDYDLRLVLVAGRTGLPRTVVSSRIQKPGLALAGFTEHLHPHRVQVFGNTEISYLATLPEQRQVEALAQLFSEEELACVVVTKDLEIPQALVSACEGAGLALMKTPLLSSEFIMRVQTFLEEALTESSSLHGVLMDVFGVGILLLGKSGIGKSEIALDLVMRAHRLVADDIVDVTRRKGAVYGAGNPVIKHHMEIRGLGIINIKDLFGVAAVREQKKIELVIELQEWDPHQEYDRLGVEDRHLQIVGVDIPLSVVPVRPGRNMATIIEVAARNQLLKLQGHHSAREFAERLNRAIAEGAMRRTLGEEVE
>NZ_CP012109.1|WP_002633238.1|374277_375141_+|RNase-adapter-RapZ
MTAPAKQIVIITGMSGSGKSTAIRALEDSGFFCIDNLPVLLLPKLTELAGGGHFERMALVVDVREGVFLKDAPRILAEVRRAGHQVEVLFLDSSDDSLIRRFSETRRRHPLAPNGTVAEGIKAERQALRDLRELADQVIDSSTLNVHDLKRMVQARFSPEPAAGPSLSLMSFGYRYGVPPQADLVLDVRFLPNPYFVPELKGLTGKVPKVAAYVLDREETQQFLDKVVDLCRFLFPRYQKEGKAYLTVALGCTGGKHRSVAIAAELTRRLTDEDTRVQLWDRDIEKE
>NZ_CP012109.1|WP_044890514.1|375963_376641_+|hypothetical-protein
MADKDSVSFWGGGDASPSSPSWSPIMQVFKSAVGLCAVVSLAACGAPEEPVEQEALAQQSSTLVTGTTQGCTFTISAVPVPGAMPPRDELVVTRAASSTCAYGAGSVTLGTSYGTMHRALLANSHGVATAYSYKPTMSGSSMNRCQVNHIDPATLSIVRTHEIAVMYGTQHVQSCSLDQTDAGATLVVYGTKGGPLPGEVGNRPNYVATYYNFFTGTTPPVYYTY
>NZ_CP012109.1|WP_144429694.1|376664_377639_-|hypothetical-protein
MRQALSKFQSLTQPIQAAPIPKDARPPTELARPASAPASRPERDSFQETRPAPKGVPRLTVPDATGVSELPFMRDLAPENEAAQAQADKGWAPTASVIAQNSDTGCGEATLAFLSRASRSVTKGSLCEQQERASVRASTAAVTGPRSTSAKVEVNLDDGATPEEMSTALGGLGIEITGGFADFGAHATSQALKAGQFGMALVDSNAILNGALSPEQRRDGPGQLHWVTIDGINSNGTADTSDDLFRVKDPVNGEYWVSARDLEKAVQSAQQHHGSGGIFALENRTDVGSTSERDALAQLNRERTASFADKNGVGSKRLSLGESS
>NZ_CP012109.1|WP_144429695.1|380607_382014_-|hypothetical-protein
MLVTHTERFHTSVGIAIRSLDLSSNPPELLVRTSSGFTQFTGAPHAGGYRFLGVPQGEFYLKRGSSFVVTDERHVEVGQNFRGREDTVFSSAFDAEMAVNLTNVAPWEDPDGSFLGSRLQLVSGQLDFVAETYLWSATTPGMTHLNGYGLAYNLSNTFPTFDGLKQDGLYVNQFSSFQGAQLPTGAPLVGETISRSLELPFFDFDPGISSVFTLSGAMQSVPSESFSLEWRMGSYPAQALAIHPNATARAPSFTISPAPHSPASSSVGYAGEVLNFTLPAGANFTLTDQLAYGNPYPASWQMVGSAHYPFSLSETAPGASRARTRSGAIASWDTLDNLVASPIEPKLTPAGALAIDGIAATTQRQVSNSSPIITWTPPVTGAPNAYRVLLNRYNVSNASLWIQNQFYLPGTASELRLPAGVLAPGAVYALTVTAIDSPNSDVTREPFTVVEQLPLHMADTLSSFFTTP
>NZ_CP012109.1|WP_049872444.1|382379_383792_-|fibronectin-type-III-domain-containing-protein
MFVMNTMRYFTSVGVAVRGRDMSDNPPEILVPNGNTFTRITGTPYGGGYRFLNVPEREYYLKSWHTYIVTDERHVELGSNRLGRADTVRTDYFETPLELDLTNLAPWRQGGTYAQNSRLHFVSGNLGVAGAATLYDLVAQGATSMSTTNAEMYHYAGDTLPVFEAAKGDELYVTQLSGVSQGMMANGQALTAATIVRSLEFPALDFTANGATPLIINGAMQEVPLSNVSLEWRLGAYAAHASAVHPNAAPRTPTFSIEVSAHGPDEGWVGYSGEVFTAQLPQGASFTLAQNLKYGNPYPSHWRLLGSANYTYSTAEVLPVIGGAPRSMSGAISVTDYLDNLVISPIAPTLTPPRSLAIDGIPATSQRVVGNSSPVISWQPPANGAPTAYRVDLISHTSTHSGIIKGTFYLSGTESEVRIPAGTLESGTVYNVRVVAIDGPNAEVTREPHRSYDSLPMTTASAITSFFNTP
>NZ_CP012109.1|WP_144429696.1|384197_385604_-|hypothetical-protein
MNTERFFTAVGVAVRGKDMSANPPDILVRSGSTFTRIRGAPYAGGYRFLNVPEGEYYLKTGATTYVVTDERHVEIGRNRLGREDTVFSDLYSSPLHLNLTNLAPWNASNPYPNNSRLQLTSAEVEFFGEANIFDTVPNGETSLNTQNASFDSFVGEIPVFEAAKGDRMYVNQLTAVNQGYLPSGQLLTASTIVRSLEVPAFDFAPDGMTPLSISGAMQEVPLSNVSLEWRLGTYTPLASAVHPAAEPRAASIYIDASAHGPEEGWVGYAGEVFFASLPQRASFTLAQNLTYGNPFPSHWRLVGTVYHSYTTAEALPGVGGPPRTLRGGISTVDYLEDLVSSPITPTLTPPRSLAIDGIAATSQRVVGNSSPVISWQPPANGAPTAYRVQIQRFYPEYQNLLPHGAFYVAGTTTDVRLPPGFLTPGSVYFMKVAAIDSPHYEVTREPFSSYEKLPSTQAEAISSFFSTP

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Crispr_ID: NZ_CP012109_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_3

691761-691873

Orphan

Consensus_repeat	Method
AGTCCCCCCCGCGTATCAGCGCGCCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_3

>merge|NZ_CP012109|3|691761-691873|CRISPRCasFinder
ATTCACACCCGCGTATCGGCGTGCCTCCGCGGCTCGTCCCCCAAGTCCCCCCCGCGTATCAGCGCGCCTCCGCGCCCCAGGCCCCGAGTGCCCCCCGCTTATCCGCGCGCCTC

>NZ_CP012109|3|3|691761-691873|CRISPRCasFinder
ATTCACACCCGCGTATCGGCGTGCCTC	CGCGGCTCGTCCCCCAAGTCCCCCCCGCGTATCAGCGCGCCTCCGCGCCCCAGGCCCCG
AGTGCCCCCCGCTTATCCGCGCGCCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002636874.1\|695336_696767_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|100082
NZ_CP012109.1\|WP_002636872.1\|697946_699254_-\|glycoside-hydrolase-family-1-protein	unknown	unknown	gnl\|CDD\|225343
NZ_CP012109.1\|WP_002636881.1\|688778_689291_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|227915
NZ_CP012109.1\|WP_002636886.1\|682358_683108_-\|ChbG/HpnK-family-deacetylase	unknown	unknown	gnl\|CDD\|212114
NZ_CP012109.1\|WP_002636875.1\|694189_695254_-\|acyl-CoA-desaturase	unknown	unknown	gnl\|CDD\|239582
NZ_CP012109.1\|WP_002636866.1\|703989_705492_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
NZ_CP012109.1\|WP_002636887.1\|680479_682375_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP012109.1\|WP_002636873.1\|696862_697876_+\|tRNA-dihydrouridine-synthase-DusB	unknown	unknown	gnl\|CDD\|223120
NZ_CP012109.1\|WP_002636878.1\|691328_691508_-\|YjzC-family-protein	unknown	unknown	gnl\|CDD\|372942
NZ_CP012109.1\|WP_002636869.1\|699938_701396_+\|DUF814-domain-containing-protein	unknown	unknown	gnl\|CDD\|224212
NZ_CP012109.1\|WP_044889837.1\|683129_684149_-\|poly(3-hydroxybutyrate)-depolymerase	unknown	unknown	gnl\|CDD\|226040
NZ_CP012109.1\|WP_002636870.1\|699608_699842_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237855
NZ_CP012109.1\|WP_002636883.1\|686889_688179_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|235963
NZ_CP012109.1\|WP_002636882.1\|688222_688756_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|239315
NZ_CP012109.1\|WP_002636867.1\|702534_703968_+\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|223545
NZ_CP012109.1\|WP_002636880.1\|689518_690739_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP012109.1\|WP_044889746.1\|701512_702433_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237057
NZ_CP012109.1\|WP_144429488.1\|690819_691263_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_144429487.1\|684217_686710_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012109.1\|WP_044889836.1\|691904_693938_-\|chloride-channel-protein	unknown	unknown	gnl\|CDD\|238233

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002636874.1\|695336_696767_-\|hypothetical-protein	gnl\|CDD\|100082	cd06161, S2P-M50_SpoIVFB, SpoIVFB Site-2 protease (S2P), a zinc metalloprotease (MEROPS family M50B), regulates intramembrane proteolysis (RIP), and is involved in the pro-sigmaK pathway of bacterial spore formation. SpoIVFB (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) is one of 4 proteins involved in endospore formation; the others are SpoIVFA (sporulation protein, stage IV cell wall formation, F locus, promoter-proximal A), BofA (bypass-of-forespore A), and SpoIVB (sporulation protein, stage IV cell wall formation, B locus). SpoIVFB is negatively regulated by SpoIVFA and BofA and activated by SpoIVB. It is thought that SpoIVFB, SpoIVFA, and BofA are located in the mother-cell membrane that surrounds the forespore and that SpoIVB is secreted from the forespore into the space between the two where it activates SpoIVFB.	6.60981e-38
NZ_CP012109.1\|WP_002636872.1\|697946_699254_-\|glycoside-hydrolase-family-1-protein	gnl\|CDD\|225343	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].	1.19069e-86
NZ_CP012109.1\|WP_002636881.1\|688778_689291_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|227915	COG5628, COG5628, Predicted acetyltransferase [General function prediction only].	5.22463e-20
NZ_CP012109.1\|WP_002636886.1\|682358_683108_-\|ChbG/HpnK-family-deacetylase	gnl\|CDD\|212114	cd10803, YdjC_EF3048_like, Enterococcus faecalis EF3048 and similar proteins. This subfamily is represented by a putative cellobiose-phosphate cleavage protein EF3048 from Enterococcus faecalis v583. It is similar to Escherichia coli YdjC, a hypothetical protein encoded by the celG gene. EF3048 might function as a homodimer. Each of the monomers consists of a (beta/alpha)-barrel fold that forms an active homodimer. The molecular function of the EF3048 is unclear.	6.29914e-47
NZ_CP012109.1\|WP_002636875.1\|694189_695254_-\|acyl-CoA-desaturase	gnl\|CDD\|239582	cd03505, Delta9-FADS-like, The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide range of bacteria. These enzymes play essential roles in fatty acid metabolism and the regulation of cell membrane fluidity. Acyl-CoA desaturases are the enzymes involved in the CoA-bound desaturation of fatty acids. Mammalian stearoyl-CoA delta-9 desaturase is a key enzyme in the biosynthesis of monounsaturated fatty acids, and in yeast, the delta-9 acyl-CoA desaturase (OLE1) reaction accounts for all de nova unsaturated fatty acid production in Saccharomyces cerevisiae. These non-heme, iron-containing, ER membrane-bound enzymes are part of a three-component enzyme system involving cytochrome b5, cytochrome b5 reductase, and the delta-9 fatty acid desaturase. This complex catalyzes the NADH- and oxygen-dependent insertion of a cis double bond between carbons 9 and 10 of the saturated fatty acyl substrates, palmitoyl (16:0)-CoA or stearoyl (18:0)-CoA, yielding the monoenoic products palmitoleic (16:l) or oleic (18:l) acids, respectively. In cyanobacteria, the biosynthesis of unsaturated fatty acids is initiated by delta 9 acyl-lipid desaturase (DesC) which introduces the first double bond at the delta-9 position of a saturated fatty acid that has been esterified to a glycerolipid. This domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain the residues: HXXXXH, HXXHH, and H/QXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the rat stearoyl CoA delta-9 desaturase. Some eukaryotic (Fungi, Euglenozoa, Mycetozoa, Rhodophyta) desaturase domains have an adjacent C-terminal cytochrome b5-like domain.	1.6154e-63
NZ_CP012109.1\|WP_002636866.1\|703989_705492_-\|GAF-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	7.72297e-27
NZ_CP012109.1\|WP_002636887.1\|680479_682375_+\|GAF-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.18023e-47
NZ_CP012109.1\|WP_002636873.1\|696862_697876_+\|tRNA-dihydrouridine-synthase-DusB	gnl\|CDD\|223120	COG0042, COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis].	3.835e-111
NZ_CP012109.1\|WP_002636878.1\|691328_691508_-\|YjzC-family-protein	gnl\|CDD\|372942	pfam14168, YjzC, YjzC-like protein. The YjzC-like protein family includes the B. subtilis YjzC protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length.	0.000281822
NZ_CP012109.1\|WP_002636869.1\|699938_701396_+\|DUF814-domain-containing-protein	gnl\|CDD\|224212	COG1293, COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription].	3.22105e-36
NZ_CP012109.1\|WP_044889837.1\|683129_684149_-\|poly(3-hydroxybutyrate)-depolymerase	gnl\|CDD\|226040	COG3509, LpqC, Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism].	2.02027e-51
NZ_CP012109.1\|WP_002636870.1\|699608_699842_+\|hypothetical-protein	gnl\|CDD\|237855	PRK14900, valS, valyl-tRNA synthetase; Provisional.	2.71582e-05
NZ_CP012109.1\|WP_002636883.1\|686889_688179_+\|amidohydrolase-family-protein	gnl\|CDD\|235963	PRK07203, PRK07203, putative aminohydrolase SsnA.	2.28414e-105
NZ_CP012109.1\|WP_002636882.1\|688222_688756_+\|peroxiredoxin	gnl\|CDD\|239315	cd03017, PRX_BCP, Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides. The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein, Dot5p (for disrupter of telomere silencing protein 5), which functions as an alkyl-hydroperoxide reductase during post-diauxic growth.	4.41443e-35
NZ_CP012109.1\|WP_002636867.1\|702534_703968_+\|pyruvate-kinase	gnl\|CDD\|223545	COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism].	0
NZ_CP012109.1\|WP_002636880.1\|689518_690739_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	6.24504e-38
NZ_CP012109.1\|WP_044889746.1\|701512_702433_+\|hypothetical-protein	gnl\|CDD\|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.00426615
NZ_CP012109.1\|WP_144429487.1\|684217_686710_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	8.4146e-80
NZ_CP012109.1\|WP_044889836.1\|691904_693938_-\|chloride-channel-protein	gnl\|CDD\|238233	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl- ions across cell membranes, thereby regulating electrical excitation in skeletal muscle and the flow of salt and water across epithelial barriers. This domain is found in the halogen ions (Cl-, Br- and I-) transport proteins of the ClC family. The ClC channels are found in all three kingdoms of life and perform a variety of functions including cellular excitability regulation, cell volume regulation, membrane potential stabilization, acidification of intracellular organelles, signal transduction, transepithelial transport in animals, and the extreme acid resistance response in eubacteria. They lack any structural or sequence similarity to other known ion channels and exhibit unique properties of ion permeation and gating. Unlike cation-selective ion channels, which form oligomers containing a single pore along the axis of symmetry, the ClC channels form two-pore homodimers with one pore per subunit without axial symmetry. Although lacking the typical voltage-sensor found in cation channels, all studied ClC channels are gated (opened and closed) by transmembrane voltage. The gating is conferred by the permeating ion itself, acting as the gating charge. In addition, eukaryotic and some prokaryotic ClC channels have two additional C-terminal CBS (cystathionine beta synthase) domains of putative regulatory function.	5.03497e-102

>NZ_CP012109.1|WP_002636878.1|691328_691508_-|YjzC-family-protein
MAKRYKTGDICESTGRYTFDGYTDGTTSPPVTAEERIIPLSKGETFPPIKSSKKGAYWK
>NZ_CP012109.1|WP_144429488.1|690819_691263_-|hypothetical-protein
MSPDSSSMLRRVVRGFAAYDLVITLPFLTPWTADWLLRTFREVHLSLSLGGEPMPAFTLQHVFFVTLFGVLAVIWALVRILQPTALHGAIDTAGRVLVSTWMVLALVQGASQVIGSFLVMEAVGAVVQGVVLWSLRGRATLAPAPTS
>NZ_CP012109.1|WP_002636880.1|689518_690739_+|glycosyltransferase-family-4-protein
MNGRRKGIASEAEGRDTGAVPREGSRAPGNDVTPGRVRRVLMTADAVGDVWTYALELTRALAPHGVDVTLATMGGPLSQAQWAEARGIPNLVIEEGRFRLEWMEDPWEDVRSAGEWLLDLEHRLRPDVVHLNGYAHGALPWLRKPLVVGHACSLSWWRAVRGEGAPVNHARYREAVSEGLRAAGRVVTPSMDLLTSLQSHYGPLAGAEVIPHARRADRVPPRSEREPFILCVGSPWDEAKNIAALEAAAPRLGWPVKLAGDARHPSERKAEPRGLQWMGHLEPHVLAEWMSRASVFVLPARYAPFGLTALEAALSGCALVLSDLPSLREVWGDGAACFVPPDDVEALVETLEMLRKDPALRTRLALRARAWALTYTPRRMASQYLSVYARLAETENTVSPAGRSMH
>NZ_CP012109.1|WP_002636881.1|688778_689291_-|GNAT-family-N-acetyltransferase
MEILRATPSEHTLLRNLYPLYLHDLSEFGVEYSLDEQGRWRPDFLPTWLIPAPEVHPLLLRWEGRVVGFAFVGQSPFPYMTPGRDYRMSEFFILRSERRNGLGRRAARAVFDRFPGIWEMSQLPSNRAAIAFWRSVIDEYTGGAFQDTYIDGAPAQVFDSRRRAPLLEGR
>NZ_CP012109.1|WP_002636882.1|688222_688756_+|peroxiredoxin
MLVPLIVAGLFSGAIPQAGETAPDFTAKDTAGNVYTLSEMVKQGSVILAFFPKAFTGGCTKELKAYRDRYADVEKAQGQVLAISMDDAETLARFKADLKAPFAFIPDPEGQIVTAYDVKMPVVSVPKRYTFVVGEDRKILKVESGSDAIDPNGAIVACPLRKPAGTKPAEPKAPATK
>NZ_CP012109.1|WP_002636883.1|686889_688179_+|amidohydrolase-family-protein
MGTVLKGGYVVELEPALVERVDLRIEGERIVARGQDLTPLADDEVVALSGKLVFPGLVSAHHRLHTVLGRGMPRPSLETYQDILEKVVWPYENALDLDAVQVAACASGLEALQCGTTTVCDLHSSPKAISGSLTRVARGLHEVGVRGLLAYAVSDRMGAVGREEGLEETVAFAKKAKGRFRGQVGAAPSFTLGPDALTGLSEALKSLGTGGVHLPLAEDPLDERLCNENYGASPVSRLLEAGLLSPKSQLAHVGHLDWADLAQVIATGAWLVHTPRANQGLEVGYAPALKFGARATLGADGVSADLFAEAQAAYLRSREAGQPIDVLRYLANGHRMASQMFDASVGPMREGSIADLLILDYLPATPLTAENLAWHVVFGLGSRHVEAVMVDGVWRMWARRPLSVSPTVVAEQAREAASAVWARMAEAAK
>NZ_CP012109.1|WP_144429487.1|684217_686710_-|protein-kinase
MVLEQNPNQVGRYRLSARIATGGMAEVYLGRRIDDDGSRGPAVAVKRLMPHLASDRRVVQMFLNEARITAQVRHPNVVTIIELGMEGNEPFIAMELLEGRSFAELRQEAAEHGHRVPLGITLRVLVEACRGLDAAHRAVDEAGRPLRIVHRDFTPDNIHVGVNGAVKVIDFGIAKADALGSGTEPGVLKGKFFYMSPEMIAGKPVDHRADLFAAGVMLYEQLCGRRPFTGLTADEVVGRIAEGRPRPPTAFDPSVPNALELVCLTALAKEPGARFDSLESFIGAIEAIGGAAEIASAEQLAAYVDSLFPPDRDIKRLALRRARLADPSHGGTPPPQARPLLSAVEVPAAWPSIKRTTSPDAATVAGATRQGLAGAATPGAEEARAAEAGASAHGAGLAAQGASAHGHAAQHASASAHGAAAPHPATSTPGHAGRAPAISAYGHAAQHPSASAHGPAAPHPATSTPGHAGRAPASSAHGHAAQTSAPGPTARSQLDAAPSGTMQRERGASDSGISEGGPRRSRRVPLLAAVVAVGVIIAGAAWFFTRPTPPPAERLARAQSATTPGAKAAALQGLGSDERASAEDLSQAGALLLKAGAHAPALELAERFVTRFPQDIEGHLLAARAATELRQGKRAERAIETASTLAPKDLRPTLALAELRERQGDVPGALDALATAHKRTPRSAEVTPRYGRMLSQSGRLDEAATVLSTWTRANDDAASLAELGFVRFRQQRVDEAATLLKRALRKDDRLAVAHYYLGAVLFRQGDTSGAERSYVEADRLSPEDPRALASRCQLHAHTGNAAGVTEVKRALAERFPTRAEALAAECVPLK
>NZ_CP012109.1|WP_044889837.1|683129_684149_-|poly(3-hydroxybutyrate)-depolymerase
MRSHRPRLALVALLAGATACSSSSPARPDDPDSGVNLPVDEEPTVPERTACTGLTFGPGTYDWTVEHDGRTRHYRVHVPPGYDATRPTPAVLAFHGYGSNEREMEGLTRLSTLADTEGFLAVYPVGLSASEINGRGTDTTTRGWNADACCGPAFMAKVNDVGFVDTLLTDLDTRVCVDTRRTFATGLSNGGFFSYRLACERASRFAAIAPVAGMDGTEPCNPSRPVPVLHMHGTADSVIRYEGGNNLGPFGAPYPSAEESVRRFAERNGCTGPTVETYQQGDSTCTAATGCVPETATASLCTVQGGLHAWPGFAGYNNGTPNLDATREAWKFFQARPRP
>NZ_CP012109.1|WP_002636886.1|682358_683108_-|ChbG/HpnK-family-deacetylase
MTSPALIINADDLGYDPAVTRGILRAMREGVVSSATFMVNTPFSEAAAREARGLAIGLHLNLARGLPVWSGFPRELLGEDGGFVEARASHLPANVVEAESFAQLARLAGLLGQPATHVDVHKHLHLHAGVLEGLARAAKRVGAPVRSINVEMRRTLESHGVATNAHFLGDAGAEAYWTMERFESELAALPRDGVIELMCHPGYRPETLKSGYAAQREVELETFLHPRAREVLARAGVVPADFRVLTGGS
>NZ_CP012109.1|WP_002636887.1|680479_682375_+|GAF-domain-containing-protein
MPLPSDVEDAFSCLPLALVRVGPDLRVQWCEEGFTLKTGVALHAGGDLRDALERTRSLDGLERAIREGVPHTGHVITRGLRQVRVQVKPAAASETAGAWLVVESSGVDDEGAFSQAVQEIARSVGETLEVDSVCAAAVVALVRCAHVRRAEVFLCEEDGDLRRVAVSDLAGSEAPEASFDSQADPFRQALALRQAQLGIQRGYGDSMGSIFAAVPLCAPRRTVGLLLLYKEPGTSFSVRELDLWSAAANQLAVAVENARLLREAKAALQVREEFISIASHELKTPLTPLKLGLFTMERRLTAGHPVELATVLKSKRQVDRLVGLVEDLLDASRLDAGKLALDLAPLEVGQLVAEVVDHFRAAFERPFTVEVPRERVWVRGDRDRLEQVLVNLLENAHKYSASEEPIVVTVERFHNEARIHVKDHGIGIPGADQSQVFQRFYRARNVSHRNFGGLGLGLFISHSIARLHGGGLTMRSAEGQGSTFTLGLPRMAPHDVKRLPHRLLLLDEDRAQEAAAERVLLAEGFEVLTARDGAEALRRATHLPVDLIVLSTSATQGQTGVFLETFATLPRARPVPILLAGDERPWWAQEGSSLCPRPYRPEELLARVRNALSVERRPLGDLSMDLLSSRP
>NZ_CP012109.1|WP_044889836.1|691904_693938_-|chloride-channel-protein
MSRFFLATLQASNRLRLPGPSVLPVAGAVVGLYSGLAAGIFSNLIGLVSGVTFGAATLKETLRQDQFKALMEAFAAARWHPEYAFIGVPLASGALLLARFIEPGGPRDEVKRRLRLLALLTLGGLSLYYPLVALAALNSVFGHSHNLPEALPHLPWWLMLLAPTLGGMAVGRLLRDRPETHGHGVPEVVRAVKSGANALPADRGLLKLVASAITIGSGGSAGREGPIVYGGAAFASTVGRVLGFSRRELSILLACGAGAGISASFNAPIAGAVFAMEIILREFELRVFSPIILASVAGTLVSQGVMGESAMLRHVPYELVSGGEVLAYAGLGIGCGLLAFTFVQLLHGMEHYFHGHGKDRLSVWLGSKPLPLRAGLGGLCAGVLAFASPTVWGSGHDYINLAALGRLPFVFLITACLLKLVATAITIGSGGSGGTFFPAALIGAMAGGAFGTLVHYFFPESTGPSGAYALVGMGGAVAALTRGPLTGMMMLYELSGNHDIILPLMVTCTIASALCHYLTERKAPKVQSDSDLLDATPVRALAVQLTPVPAGTPLRALTDLLLTSEAGTLPVLDTVGQLYGTVQVEQLREVWRDESVYPLLVASDLARKLPALAPDSNLAHALHVMDHEDVDALPVTASPGSQTCGLLTRAAVRRFLFAQHAQAHAEGNYPVSPSEAR
>NZ_CP012109.1|WP_002636875.1|694189_695254_-|acyl-CoA-desaturase
MQTPSQALPAADERLNWLSSIPFFAVHLMCLFVFAVGAKPVDVAVCVGLYVLRMWGITAGFHRYFSHRAFKTGRVFQFILAFVGSMSAQKGVLWWAANHRHHHRHSDQAEDIHSPLQKGFWWSHVGWILSDKYNDTRMEGIKDFARFPELVWLNRFHLVPTVMLAVAVYFIGGFSMLVWGFFVSTTLLWHGTFTINSLSHIFGKRRYKTTDTSRNNWLLALVTLGEGWHNNHHYHQNTANQGWFWWEVDLSYYALKVLSWFKVVEGLRMPSEATKYAFRKYTEAERAELAAPTRFWGASGARAQFVATKAAGDAARAAGDAARAAGDKVREALTAAADHLPTSAPPPSAVLKRR
>NZ_CP012109.1|WP_002636874.1|695336_696767_-|hypothetical-protein
MFRFRLGSIPVEVHPSHLLVSGMLALGGIPERGTSTRWPFGSSAAESAGGHASAVAIYILSWMLIVFVSVLVHELGHALASRMFGYRPSIALAWMGGHTLPTDAPGPLPWKRDVLITAAGPFFGLMLGFASYAASQRFLEPPGLVFFLQTFAIANFFWAVLNMVPVLPLDGGRITTALATRVFGPRRGFMLAQGLAVLACVGLVLLGLVARQFILVIMFAMFGMQAFRALLASFQGGTAESAPLTGPLAEKLREAREALDAGRMDDARRLGASVLEAPEGLTPTLASHAHHLMGWIALKEGHGRKALDHFSQVQGLPVEPHAVAASFSLVGDDARAVEWWKQAWQTSSDRTVMHEYAGTLIRMGREAEAMKLPRVDPEAAFSCAERVLFIRGAYSEAAAVGEAALKHAPSATLAYDAACAYARARNVPDAMRLLRRATELGFNDGAYAASDEDLAPLHGYPAFEEWLTELRQSAAS
>NZ_CP012109.1|WP_002636873.1|696862_697876_+|tRNA-dihydrouridine-synthase-DusB
MPQLGPYNLPNPYILAPMAGVSEMPFRVLAFRLGAALCPTELVSSQGLMRANQRTLKYLRYDAEVERPYSLQIYGGEPEAMARAAVVGKEAGAQIIDINMGCPVKKVVKNGAGSGLLCDVPRAADIVRRIREATDLPVTCKIRSGWDAKSLNYLQVAGALQEAGCAGLAIHPRTREQGYSGQADWRVIADLKRHFPELPIIGNGDVKAPADAARMLETTGCDFVMIGRAALGNPWIFRELSGGPPATPRERSELVLAHFRSHLEFVGDPLGAVRSFRKQLAWYAHGLYGAASFRAEVNGLDAPEAVESCVRRFFAEAQVDLAGPGEEQDVDYRAALG
>NZ_CP012109.1|WP_002636872.1|697946_699254_-|glycoside-hydrolase-family-1-protein
MSATEQTFPEHFTFGVATAAYQVEGGIENDWAEWERAGRLKEPDARCGPAVDHWNRYEEDYALARAVGATAFRISLEWARIEPERGRFDEAALEAYRERLLKMKAHGLRPVVTLHHFTHPTWFHRETPWHEPASVDVFRRYAKRCAALLEGMDALVISFNEPMVLLLGGYLQGAIPPGIADGPTTMRAMENLVRSHVAAREELLSRLGRVELGISQNMLAFAPDRWWHPLDRALVRLGAQAYNHAFHEALATGKLRVTMPGVASTRVDIPGARDSVEFIGVNYYTRAHLRFVPRPPFIEFKYRDIHGRGLTDIGWEDWPEGFLQTLRDVKRYGKPVWITENGIDDRGGARRPHYLHSHLAQVLAARAQGVDVRGYLYWSLLDNFEWLEGWGPRFGLYHVDFDTLRRSPTPACDYFRAVATQRRLVPPDAVRPSSG
>NZ_CP012109.1|WP_002636870.1|699608_699842_+|hypothetical-protein
MAAKKKTAAKSATKKAAKTAKTAKAAKSAKKTTARKTAGKTATKKAAAKKTTRKAAKKAPARKRAPKAAAAPVTPES
>NZ_CP012109.1|WP_002636869.1|699938_701396_+|DUF814-domain-containing-protein
MSLRPVELEQVVAEVGARLTGAVAQKAWCPLPRLAYVELRVPGKSVLLCLCAEGDLSRVSIADDRFPTPGEPAPFQRWLRQELTGFKLQGARFLEPERVVILDFEREDIRRRLVLEVGAPGGLLLLSDNGRVLMLSGEGFGSRRNLYPGATWAPPEPPPPEALAKARSQPSRLAPEEADALPYAQAAERLLGARDKASRSETIRRRLAQPYRARLKRSSRTLEKVRAEAARGPEAEQHREVGELLAQNLFRLKRGATEAVLTAYTEEGVKEVRVTLDPKRTPKEEADWRFHQYRRLLRGVAQARHREAEMAREVAHAKQALEQIERMDDAALLSQAEVLQLPSSGEGAQEGRPFKEYVGHGGARIWVGRGAEDNDALTFKVARPWYLWLHARGVPGSHVVLPLEKGQEVVQEALLDAAHLALHHSGAKGEPRGEVSYVPAKFVRKVKGGAPGQVTFTREKTFVVRMEPERLERLLKSRHTEPAAP
>NZ_CP012109.1|WP_044889746.1|701512_702433_+|hypothetical-protein
MRGTMRSRVSPEPFRQTSLFPRGLSAATRAAESAAAPRPEGGPAAAVAPAPRPVAPPVPLPPRGLPLEEAPRILTRPPTREELWTRAESLAWRLSAELGMPVRLSVTDNRSTMVSFRRGSTVLALRLHHMFLDAPEPVVRAVADYAGRGHRTAGAILDEYIRGQQPRIRQMRRESDADLNPRGRCFDLQELYDATNREFFQDLIQARIGWGRMPPRRRRKSIRLGVYDHQTREIRIHPTLDSPEVPSFFVEFIVFHEMLHQLFPSTGRGGRRVHHPRAFRERERTFPHYAAALRWERENLGMLLRG
>NZ_CP012109.1|WP_002636867.1|702534_703968_+|pyruvate-kinase
MRRAKIVCTLGPASQSQEMLEALLENGMDVARLNFSHGSHEQHAENIAKLRAASLKVRKAVGILGDLQGPKIRTGRFVKGSTELKEGGTFHITTDETVPGTDEIVSTTYPLLAADVNPGDRILLDDGLLELKVLETDKQKLIRTQVIHGGTLKNNKGINLPGVAVRADALTPKDREDLIFGIKAGVDYIALSFVRQPSDLDTARQAMAEVGRTVPIIAKLEKPEAIARLDAILDKTDGVMVARGDLGVEIPPEEVPAVQKDIIRRSNLRGLPVIVATQMLNSMIDNPRPTRAEASDVANAVFDGADAVMLSGETASGKFPIESVQMMERIILAAESSARTTQSLMRVLETPLGLPHHFPDVIARVACEAAKASNASLIAAFTLSGVTARLLSHYRPTVPIVAFSPNQEVRRRLALLWGVVPRVLEPIQDTEAMVKRVEEELLARGLGQKGDRIVIVFGAPVGQPGKINSLRLHTIQG
>NZ_CP012109.1|WP_002636866.1|703989_705492_-|GAF-domain-containing-protein
MLAQPAPQPELNRRLAKLTSILDVAKAMSAERDLDLLLPLILFEATKVVEADRCSLFILDRERNELWSKVAQGSKNEIRLPVGSGVAGQVAQTGAVINIPDAYADARFNRSFDISSGYQTKTILCVPMRDAGGEVTGVIQALNKLGDASFNAEDEELLLALGAQAAGAIENALLHEDINRLFEGFVSASVVAIESRDPTTAGHSGRVADLTVAMAQALEHLSTGPYAHTRFSAGELQELRYASLLHDFGKVGVREPVLVKAEKLYPHELEGLRARFQLARKDLQLQSYRRRIEAVKVRGQANLAEIEAEEEERLARESGQLDEVMAFILSCNRPTVLAQGNFERLHELGGLRFVDAHGQAQPLLLPGEIQSLSIARGTLSPEERREIESHVEHTYRFLSQIPWTRTLRRVPEIAYAHHEKLDGTGYPRAEKDIPVQSRMMSICDIYDALTASDRPYKKAVPHTLALDILKRESDAGQLDPALYTVFIEADIPRRVLQGIK

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Crispr_ID: NZ_CP012109_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_4

845000-845092

Orphan

Consensus_repeat	Method
CGGCGGGTCGGAAGGCGGCGGCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_4

>merge|NZ_CP012109|4|845000-845092|CRISPRCasFinder
CGGCGGGTCGGAAGGCGGCGGCTGAATGCCCGTCGTGCCGGTTTGCGGATTCGGCGGCGTCGCGACGGCCTGCGGGTCGGAAGGCGGCGGCTG

>NZ_CP012109|4|4|845000-845092|CRISPRCasFinder
CGGCGGGTCGGAAGGCGGCGGCTG	AATGCCCGTCGTGCCGGTTTGCGGATTCGGCGGCGTCGCGACGGC
CTGCGGGTCGGAAGGCGGCGGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002635940.1\|837399_838047_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176860
NZ_CP012109.1\|WP_002635944.1\|842938_843763_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002635947.1\|846841_847528_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP012109.1\|WP_021781134.1\|841483_842857_+\|tail-fiber-domain-containing-protein	unknown	unknown	gnl\|CDD\|240612
NZ_CP012109.1\|WP_002635938.1\|833957_835025_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP012109.1\|WP_044889726.1\|850694_851615_+\|pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|107209
NZ_CP012109.1\|WP_002635941.1\|838171_839587_-\|L-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|273233
NZ_CP012109.1\|WP_002635950.1\|849649_850549_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP012109.1\|WP_049872228.1\|852332_853082_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002633459.1\|855766_856498_+\|glutathione-S-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|372593
NZ_CP012109.1\|WP_021781132.1\|851637_852177_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002635936.1\|831986_832166_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_144429494.1\|853078_853465_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044889814.1\|843777_844590_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002635949.1\|849142_849424_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002635939.1\|835026_837174_-\|catalase	unknown	unknown	gnl\|CDD\|236886
NZ_CP012109.1\|WP_044889727.1\|839803_841345_-\|DUF4041-domain-containing-protein	unknown	unknown	gnl\|CDD\|214947
NZ_CP012109.1\|WP_144429702.1\|854322_855708_+\|M1-family-metallopeptidase	unknown	unknown	gnl\|CDD\|341066
NZ_CP012109.1\|WP_002635948.1\|847587_848976_-\|ammonium-transporter	unknown	unknown	gnl\|CDD\|223083
NZ_CP012109.1\|WP_002635937.1\|832162_833875_+\|sodium:solute-symporter	unknown	unknown	gnl\|CDD\|271385

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002635940.1\|837399_838047_-\|SRPBCC-family-protein	gnl\|CDD\|176860	cd07818, SRPBCC_1, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	2.34606e-70
NZ_CP012109.1\|WP_002635938.1\|833957_835025_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.00459136
NZ_CP012109.1\|WP_002635939.1\|835026_837174_-\|catalase	gnl\|CDD\|236886	PRK11249, katE, hydroperoxidase II; Provisional.	0
NZ_CP012109.1\|WP_021781134.1\|841483_842857_+\|tail-fiber-domain-containing-protein	gnl\|CDD\|240612	cd12820, LbR_YadA-like, YadA-like, left-handed beta-roll. This group contains the collagen-binding domain virulence factor YadA an adhesion proteins of several Yersinia species, and related cell surface proteins, including Moraxella catarrhalis UspA-like proteins. The collagen-binding portion is found in the hydrophobic N-terminal region. YadA forms a matrix on the bacterial outer membrane, which mediates binding to collagen and epithelial cells. YadA inhibits the complement-activating pathway with the coating of the cell surface with factor H, which impedes C3b molecules. These domains form a left handed beta roll made up of a series of short repeated elements. UspA1 and UspA2 are part of a class of pathogenicity factors that act as cell surface adhesion molecules, in which N-terminal head and neck domains extend from the bacterial outer membrane. The UspA1 head domain of Moraxella catarrhalis, is formed from trimeric left-handed parallel beta-helices of 14-16 amino acid repeats. The UspA1 head domain connects to a neck region of large extended, charged loops that maybe be ligand binding, which is in turn connected to an extended coiled coil domain that tethers the head and neck region to the cell surface via a transmembrane region.	6.10783e-19
NZ_CP012109.1\|WP_002635950.1\|849649_850549_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	5.17369e-42
NZ_CP012109.1\|WP_044889726.1\|850694_851615_+\|pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|107209	cd06448, L-Ser-dehyd, Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.	1.02195e-121
NZ_CP012109.1\|WP_002635941.1\|838171_839587_-\|L-serine-ammonia-lyase	gnl\|CDD\|273233	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form. This enzyme is also called serine deaminase and L-serine dehydratase 1. L-serine ammonia-lyase converts serine into pyruvate in the gluconeogenesis pathway from serine. This enzyme is comprised of a single chain in Escherichia coli, Mycobacterium tuberculosis, and several other species, but has separate alpha and beta chains in Bacillus subtilis and related species. The beta and alpha chains are homologous to the N-terminal and C-terminal regions, respectively, but are rather deeply branched in a UPGMA tree. This enzyme requires iron and dithiothreitol for activation in vitro, and is a predicted 4Fe-4S protein. Escherichia coli Pseudomonas aeruginosa have two copies of this protein. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	0
NZ_CP012109.1\|WP_002633459.1\|855766_856498_+\|glutathione-S-transferase-domain-containing-protein	gnl\|CDD\|372593	pfam13409, GST_N_2, Glutathione S-transferase, N-terminal domain. This family is closely related to pfam02798.	1.43495e-07
NZ_CP012109.1\|WP_002635948.1\|847587_848976_-\|ammonium-transporter	gnl\|CDD\|223083	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism].	7.1572e-158
NZ_CP012109.1\|WP_044889727.1\|839803_841345_-\|DUF4041-domain-containing-protein	gnl\|CDD\|214947	smart00974, T5orf172, This entry represents the putative helicase A859L.	5.9737e-17
NZ_CP012109.1\|WP_144429702.1\|854322_855708_+\|M1-family-metallopeptidase	gnl\|CDD\|341066	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain. This family contains mostly bacterial and some archaeal M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.	5.79292e-38
NZ_CP012109.1\|WP_002635947.1\|846841_847528_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.03256e-14
NZ_CP012109.1\|WP_002635937.1\|832162_833875_+\|sodium:solute-symporter	gnl\|CDD\|271385	cd11494, SLC5sbd_NIS-like_u2, uncharacterized subgroup of the Na(+)/iodide (NIS) cotransporter subfamily; putative solute-binding domain. Proteins belonging to the same subfamily as this uncharacterized subgroup include i) NIS, which transports I-, and other anions including ClO4-, SCN-, and Br-, ii) SMVT, which transports biotin, pantothenic acid and lipoate, and iii) the Na(+)/monocarboxylate cotransporters, SMCT1 and 2. SMCT1 is a high-affinity transporter while SMCT2 is a low-affinity transporter. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.	3.61563e-148

>NZ_CP012109.1|WP_044889814.1|843777_844590_-|hypothetical-protein
MRNMVAVIVAAVTLGASQALAAAPVEAGKVYSGSEGEEVAVVPLTPRSDKKFLLRVKGTSSEFDNLVFPYEQNDWSTRSTEQFNYSTQWRGRKYTALHVRDTRYELYVPGRQRPIRMTYDEKKTAALKAEEVYSAHQKQMKDGTLTKLMAFDRKGEESGHDKEYAASLLEMNNACGTSVSARIDWSSIDEDQLKELAISSFCGTPLTTLKDLCSASAIAKQTVQEKVKRVSCRFGSGLEPKIEADHVIWTTNREVSNQDKFANKYFKQNL
>NZ_CP012109.1|WP_002635944.1|842938_843763_-|hypothetical-protein
MRFQRFALAAMSFACTAAMAAEPIQPPWGKESNLGEKMMLEGTSVCTDGKGHFVALTPDDEDINAALYYGDGKQFVQVAHPGPYTSPTSFLDPRFFNKGSNPNFRGIDWRVMSEVEIDRKERTCKLRCGEKDIPLTMLEGEPAAEVLRKSTYLPNPQKFRPYALLRDTKGVYYFVDRGFHESEKKNYRVFIGPRGGLKAQKMTNVISDSEGEIFSTKRGDLRLLLDKAKPAMWIENTKRRHELRQVPVDENLPLIYNELGVYEGLRLGTPCDDQ
>NZ_CP012109.1|WP_021781134.1|841483_842857_+|tail-fiber-domain-containing-protein
MQGSRVFVALSCLTLAATGCGSEAPPAQNWEVGSGLRLGDDNVVSVAYGAGPGTVVEGNDPRLHDARPPLPGNEGYIQNGTQPQDASLSLAGTVSTKSGLFVDATAAVASPVPLLRVTNTHAAAPAWDALPVFKVDSGGGLLSRGEFVSGNGPLPMSSGVGTRLMWAPARGAFRAGTALDEWDDDNVGEYSWAGGNRTRASAYGAFSFGDQCAASGTVATCFGSANRASGTASFTSGASNIASGFASTAMGYTNTATGQGSVAIGYRVQAEGNYGVALGYRVSTGGRTGSFIWGDESTTTASTSTANNQFMIRAAGGVRLRTSSSLSTGCDLPAGSGVFSCTSDRNLKEDFRDVDGEALLAKVAGLPVASWRYKGEDGQVRHLGPVAQDFRAAFGLGTDDTSIGMLDIDGVNMAAIQALERRTRELHAKSAELDALKAELAALKASVAELKASLPRR
>NZ_CP012109.1|WP_044889727.1|839803_841345_-|DUF4041-domain-containing-protein
MQPAVWVLGAVSLLMSGLFLFTAVRLASVRKRFKPVLDVEAERQRVTAELERAKAESAHALAAERNRVAAELTRAREDADTAIRKAQAELLRVKEENERAISQERTRTQGELTRLREQAETAAREAEVRRQQAQVERSQLENAISRLSAELRPLEEEAVLRSYGLYKPIYNFSTSQKYEERLDDLREQQKTLLKDKKAAYCTAEWEVNGSKAEGRKQTERTLKLMLRAFNGEADACVAKVTYKNVKAMEARIQKAADAITELAKIQQCFIDARYVNLKLDELHLAHEYEEKRQQEKDEQRRIREQMREEETAQRELERARLEAEREARRDEEALRKARAEFEQSTGTQQQKLQERIAELERRLAEDLERQRAISQAQLTRTGHVYVISNIGSFGEDIFKLGMTRRLVPQDRIDELGDASVPFEFDVHAIIRTVDAPKLEAELHRTFAHRRVNRINERKEFFRASLDEIADAVRKHHGDFELTRVAEAAEYRKSLALTDEEQRTKEGTARRPAA
>NZ_CP012109.1|WP_002635941.1|838171_839587_-|L-serine-ammonia-lyase
MAVSVFDLFKIGIGPSSSHTVGPMRAARMFARKLADAGHVERLTKLKVELFGSLGATGKGHGSDKAVVLGLLGETPEGVDVESVPAVISRWRAEGRLALLGQREVTFRDGEHLVMHRRRSLPFHPNGMRFTATGPDGVELLSTVYYSVGGGFVVDDTAAAAGKDPLTKDTTPLPYPFQSAAALLAHCERERISFSSIMLANEKTWRDEAEIRAGLLRVWDVMQACVRRGCTSGGILPGGLKVERRAAGMYQKLISRPEAGLTNPLTVLDWVNLYALAVNEENAAGGRVVTAPTNGAAGIIPAVLHYYWRFVPGANEDGVVRFLLTAGAIGVLYKENASISGAEVGCQGEVGSACSMAAGALTEVMGGTPLQVENAAEIAMEHNLGLTCDPIGGLVQVPCIERNAMASVKAINATRMALSGDGRHFVSLDKVIRTMRDTGRDMKDKYKETARGGLAANVLEVANLSVGLPEC
>NZ_CP012109.1|WP_002635940.1|837399_838047_-|SRPBCC-family-protein
MLKKILAGLAAAILLFVGFVATRPGTFTYQRSAVLPVSADIAFPLVNDFHRWTEWSPWDGLDPQQKRTYSGPESGTGADYTWAGNDQIGEGRMTITDSKVNEQVTIRLEFIKPFAATNTTTFTFSAAEGGTQVVWAMSGENNFISKAMGLFMDMDAMIGKDFERGLATLKDVAVADAKKHAEAEATRAAEKARAEAEAAAQPAEGAPAVAAPATP
>NZ_CP012109.1|WP_002635939.1|835026_837174_-|catalase
MKTRKPSAKSRPTTLKVESLEPHRMHAEGKVLTTDQGIPISDTDNSLKAGVRGPTLLEDFHFREKMMRFDHERIPERAVHARGSGAHGYFQVYKSLEKYTQASFLTDPSLRTPVFVRFSTVGGSRGSADTVRDVRGFATKFYTEQGNFDLVGNNMPVFFIQDGIKFPDFVHSVKPEPHNEIPQASSAHDSLWDFVSLVPETSHMVMWLMSDRAIPRSYRMMEGFGVHTFRLVNAEGKAHLVKFHWKPLLGNHALAWDEAQKLSGKDPDFHRRDLWDAIEAGDFPEYELGLQILPEGDELKYGFDLLDATKLLPEELVPVQRVGKLTLNRNPDNFFAETEQVAFCVANVVPGIDFTNDPLMQARLFSYLDTQLTRLGGPNFAELPINKPVCPVTNHQQDGFGRHTIPTSRANYHPNTLGGGCPVLANPAMAFHHRQERVEGHKIRARSNSFSDHFSQATLFYKSLSKPEQEHVVAALEFEIGKVERVEIRERVVNQILVNIDPALAARVARAVGVEPPKATKPAKAPKASGKKGAPSVDTSPALSMENSPHDSIKTRKIAALVSDGFAGKELDGVRKALAERGATLEVVGPTLSPVTSLEGREERPLRTFANTSSVTYDAVYVPGGEKSVAALKRVPQAVDFVREAYIHCKALALSADAVLLLSAAGVDDLEPAPTKGVEAMRGVVRSAKTETKGFGQLFAEAIAKRHWERETPLA
>NZ_CP012109.1|WP_002635938.1|833957_835025_+|hypothetical-protein
MPDGNRRPGRPGRSDERHSSLDEDEDATRDIPLLTRPEETRMGPVEPRFEETRMGPVEPRFEETRMGVVDPLTEETLMEAEEEEALPLPRSEKPRARGKPSRAAPPPPPATEVQTEVMPQKLPAARAGGPPAKPTGWLAAGGDKRPSPPRASEAPASLGVVRLSPLEPLGAKVKAAEDEAPALRTMFANHSALLAEQLREALSKKMYGRGPHRVLRIDEPEGPSTAGGKLARQAISLVPRKGSGPSLTCGWVDVSKREAQLRNFEAVAKRYEVHHGEPLELAPEEYERFLNDVEAVLLQAVIKVRVIIPEEAAAVRVQGPAAGSRTKGVPPLWAGLLAALAFALGLLAGRMGTGG
>NZ_CP012109.1|WP_002635937.1|832162_833875_+|sodium:solute-symporter
MTGLDWLVLGGTIAFIVGWGLWKSRGAGTSEDYLRGGRDLKWPTIGLTVMATQASAITFLSVPGQAYEDGMRFVQFYFGLPIAMIIISAVFVPIYYRLNVITAYEYLESRFDLKTRLLGAFLFLIQRGLAAGITIYAPAIILSAILGWPLEPTVVGMGALVILYTVTGGAKAVSQTQKQQMVVMMGGMVVAAIVIVWRLPEHMSFGKAVDVAGAFGRMNVVSFDFDMSDRYNFWSGMTGGLFLSLSYFGTDQSQVGRYLSGRSVSESRLGLLFNGVLKIPMQFLILFVGILVFVFYQFSTPPLLFNETLRTRVQGTAQAGEYAALESKWEHVQTRKRAEVERYLAAVEAGDAVAGETSRSLLQNAEQEASAVRKEAKEMVVRALPGAETKDSDYIFITFVKRWLPSGLFGLLIAVILSAAMSSIASELTALGATTTVDFYRRVFHKNASDRHVLVASKLFTVFWGLVAVGFATFASLLDNLIQAVNILGSIFYGTVLGIFLVAFFVKHVRGHAVFAAAVVSQTAVIGLFFLSDVGYLWFNVIGCALVVALSLVAQVVLPRGETPAPAPGA
>NZ_CP012109.1|WP_002635936.1|831986_832166_+|hypothetical-protein
MSTAPNLTPREPTAEASAPRPELDDAPPLLGSWRNIYLLVMATFVAFVVVGWVLTEVYT
>NZ_CP012109.1|WP_002635947.1|846841_847528_+|GNAT-family-N-acetyltransferase
MPKAKTPNPPDSLEVRVRRIHRRDLNRTWEFLKLVFRDVNRETVEYQRPRSKRRFLEVYTSEWIEQLLYEVDGSIVGYSECAFEATGDDNWVNPRWFEKRGMRPLFVEELAVHPDYQGRGVGSFMLDQLQHLARTRGCTHLVLEVAENNESALAWYRTRSFYKLDAAIFLAQKVPGEPDLLPPRRLKRRQKATAETGAPTTGPMPEVVTVKVGAARKSRSTAARKKSG
>NZ_CP012109.1|WP_002635948.1|847587_848976_-|ammonium-transporter
MKKWLAVALLVGVGVAGLLVKPAEQVVRGEPINTADTAWILTATALVLLMTPGLSFFYGGMVRLKNVVSTLLQSFIAMAVISLLWVVVGFSLSFGDSFHGFIGDPRTFFMFSGVGGETHPDLAPTIPLMLFALFQLKFAIITPALITGAFAERVRFKAYLLFMVLFTLIIYAPLAHWTWHPQGFLRNWGVLDFAGGTVVHMSAGFAALAGALVLGRRQVHVENAAHTPANIPFVMLGTGMLWFGWFGFNAGSAMSASSLATLAFATTNTASAAAMLGWMAFDWLRGRKPSAMGACIGAVVGLVAVTPAAGFITVGQSIVVGLVASFVSNAAVHFKNRTSLDDTLDVFPCHGLGGVVGMVLTGVLAKDVGLIHGETRTFTMHMLALVLVSVFSFVGSYLLYKLVDRIVPLRVTREHEDEGLDLSQHGETVGESVIAPVPQPARTATTAVATEPARADNVPQPA
>NZ_CP012109.1|WP_002635949.1|849142_849424_-|hypothetical-protein
MRTKLTAVTLVASLFASSASAAITVRYYNRDSRGHTWPVVCSGVKTSVTFGKSQTASVTIQGSGPCSVKTDAGTVVLKGGEDLEIKDGRIQVK
>NZ_CP012109.1|WP_002635950.1|849649_850549_-|LysR-family-transcriptional-regulator
MRQVELRHLRYFVAVAEAGSMMAGARAVGIVQPALSRQIRELEEAIGTPLLIRRSTGITLTAAGASFLQDATRLLFELQGSRERALRSAAGQRGELRIGVLPNYFPLPVVSNVLKAFRKACPDVMLSIVPMLSAEQATAIARGELDGGIMAWRQDEAPHLSGIRLLRDRFVLAMLSTPGQRFRAPRQLAELTGAPFIWFDPLRSAAHHRFLFEQCRRAGFTPRIAQVGTDIPTLIGLVAAGMGYAFVPESTAPTCPRTVRLVALDELDGRFDVEFVYDGQADSPVVQQFLAALRATTNA
>NZ_CP012109.1|WP_044889726.1|850694_851615_+|pyridoxal-phosphate-dependent-enzyme
MPLHIQTPYIRSHAASLRLGQDVLLKLEAMQPSGSFKLRGVGAVCEARRAAGARRFVSSSGGNAGIAVAYAGRELGVPVLVVVPESTSARARDVLRHEGAELIVHGASWAEANAFAQSVLGAHDAFVHPFDDPVLWQGHATMIDEMAAAGPKPDAVVLAVGGGGLLCGVLEGLVRNGWSDVPVVAAETQGADCYARSVAQGRPVELAEITSVATSLGAKRPCDAAVAWATRHAVDNIVVSDAAAVAASLWFLDEHRILVEPACGAALAALDAASSALAAASRIAVIVCGGATATVEHLRALSRRER
>NZ_CP012109.1|WP_021781132.1|851637_852177_-|hypothetical-protein
MTQTHRLGCACGQVQLQVEGAPIVSVECCCDSCRAAGDRLQTLPTARPVMEPHGTTRFVLYRKDRVRFIEHAGRLKEFRLTPESKTRRVVATCCNTPVFLEFENGHWLSLYGCLWPEGTLPPLEMRTMTGDLPAGTTLPGEVPNGKWQQVSFFARLLGAWIRMGFRSPKVAVVNGQLHV
>NZ_CP012109.1|WP_049872228.1|852332_853082_-|hypothetical-protein
MREQPSFTKGREQLLAAGCAHPKWLTLEPEFFSVITWDDADNVLLAIQMFHPEAMRSSNSMEQVDVWLKAPPEWRPWLEDARRGEGLFADQRHDWARRLSPRELASVRARLTKLKPTARRKLIAETVYRARQAPLSAVDLVTEFFPEPKDGKLDLDTQWAWSDRVLYLRHTPLCRKAAEVVFREQWAPETEKALVFNLTQCGSFRGEGPPKHCVEHATPAACIQRWVEAQQEQERSANPAEREGSAPAE
>NZ_CP012109.1|WP_144429494.1|853078_853465_-|hypothetical-protein
MFAIMAQGSASAAKPNPAQRVLTWKVEGVPQSLTVLTADGPTLPSKEPDTHIDLLSVIGPMVATRFMHTWMGERGGYVTESMQVEYRGTYRFSLGGYLEETRQGGRVLEAILKLPNVPAKERCPPPSR
>NZ_CP012109.1|WP_144429702.1|854322_855708_+|M1-family-metallopeptidase
MGGMGACRCTGPLDASEAGLLEAQVCSAPGEGGALAACPRLCDAVGGQPAPPPLAGLARDIVATVLDVKLGSLRGTATIEVAESKAPGLSLRVDSLTITGVRGRCGGLQYTVKDGQLDIGVPAWASTVVVDYAFPASGNTDGYRHTGSTYTWPTFCRNLFPCHPSPDDGMRFSLRLGELPEGQTSVYPRKIEGDVPAYMLGWAVGAYSERSLGATRAGTQVSVWYLPGGESAAIEGTRHLRDAMDFFETTYGPYAFGDKVGSVSVDWGPKGQGGMEHHPYWHVAVQSMAERLMHHHEAAHGWYGNGVRIQCWEDFVLSEGTTDYLTARAVRATEGEAAEAKLWASRREDLEKAVAKRDTVALPDETCNAIDMSKHPLASQIPYLKGGLFFHELEQQVGTAALDRVLARFYGLHLGKSARMQQLLDFVKSETGQDPGPLAQGWLRGLGIPASTSVAAEPVSR
>NZ_CP012109.1|WP_002633459.1|855766_856498_+|glutathione-S-transferase-domain-containing-protein
MPQSPITLVGEAFSPWTQKARWALAYCGVAFAYQEYIPTLSEPLLRWRMRQWSGAVSVPVLLVGPQVVRGSWDIARYAAQRAGDERLGDFEAVAPWNQLGEAALAEARTRVVRRVLADPEALDEASAAVLPRPLRRPLRFIARDAARRLDRKYRHLVVPGSLRQALERTRAGLLAAGGDHLLGRFSYADVIMAVVLEAVAPAAQIEPPLGPATRRCWSDDALAGEFADLLQWRARLVAAHSAR

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Crispr_ID: NZ_CP012109_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_5

1288869-1289074

Orphan

Consensus_repeat	Method
CCTCCCCAGGCGAGCGCGGACCCGTTCGCGTCCATCGACCTTCACGGCGC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP012109_5

>merge|NZ_CP012109|5|1288869-1289074|PILER-CR
CCTCCCCAGGCGAGCGCGGACCCGTTCGCGTCCATCGACCTTCACGGCGCGCCGGGGCCCAAGCCCGCCCGGAGCAGCCCTCCCCAGGCGAGCGCGGACCCGTTCGCGTCCATCGACCTTCATGGCACCCCGGCGCCCAAGCCTGCCCGGAGCAGTCCCCCCCAGGCGAGCGCGGACCCGTTCGCGTCCATCGACCTTCACGGCGC

>NZ_CP012109|5|1|1288869-1289074|PILER-CR
CCTCCCCAGGCGAGCGCGGACCCGTTCGCGTCCATCGACCTTCACGGCGC	GCCGGGGCCCAAGCCCGCCCGGAGCAGC
CCTCCCCAGGCGAGCGCGGACCCGTTCGCGTCCATCGACCTTCATGGCAC	CCCGGCGCCCAAGCCTGCCCGGAGCAGT
CCCCCCCAGGCGAGCGCGGACCCGTTCGCGTCCATCGACCTTCACGGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002638867.1\|1291332_1292058_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176506
NZ_CP012109.1\|WP_044889634.1\|1283515_1284628_-\|ArsA-family-ATPase	unknown	unknown	gnl\|CDD\|223082
NZ_CP012109.1\|WP_002638872.1\|1297447_1298785_+\|glutamate--cysteine-ligase	unknown	unknown	gnl\|CDD\|130503
NZ_CP012109.1\|WP_002638863.1\|1286079_1286880_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP012109.1\|WP_021781104.1\|1280237_1280759_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP012109.1\|WP_044889674.1\|1285709_1286018_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002638871.1\|1296569_1297388_-\|EI24-domain-containing-protein	unknown	unknown	gnl\|CDD\|377798
NZ_CP012109.1\|WP_044889630.1\|1298798_1299467_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002638859.1\|1280889_1282083_-\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|320702
NZ_CP012109.1\|WP_002638864.1\|1286890_1287562_-\|polyhydroxyalkanoate-synthesis-regulator-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|369568
NZ_CP012109.1\|WP_044889635.1\|1278116_1278572_-\|Holliday-junction-resolvase-RuvX	unknown	unknown	gnl\|CDD\|335420
NZ_CP012109.1\|WP_002638861.1\|1284624_1285539_-\|ArsA-family-ATPase	unknown	unknown	gnl\|CDD\|349755
NZ_CP012109.1\|WP_082282904.1\|1299585_1301409_-\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|212667
NZ_CP012109.1\|WP_002638866.1\|1290244_1290997_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002638868.1\|1292061_1292958_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044889631.1\|1293128_1296359_-\|PDZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|274843
NZ_CP012109.1\|WP_044889673.1\|1290993_1291221_-\|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl\|CDD\|184862
NZ_CP012109.1\|WP_002638857.1\|1278773_1280231_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044889675.1\|1282140_1283283_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP012109.1\|WP_162492073.1\|1301539_1302865_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_044889634.1\|1283515_1284628_-\|ArsA-family-ATPase	gnl\|CDD\|223082	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning].	3.9922e-42
NZ_CP012109.1\|WP_002638872.1\|1297447_1298785_+\|glutamate--cysteine-ligase	gnl\|CDD\|130503	TIGR01436, Glutamate--cysteine_ligase_chloroplastic, glutamate--cysteine ligase, plant type. This model represents one of two highly dissimilar forms of glutamate--cysteine ligase (gamma-glutamylcysteine synthetase), an enzyme of glutathione biosynthesis. The other type is modeled by TIGR01434. This type is found in plants (with a probable transit peptide), root nodule and other bacteria, but not E. coli and closely related species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	1.09248e-115
NZ_CP012109.1\|WP_002638863.1\|1286079_1286880_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	8.17435e-53
NZ_CP012109.1\|WP_021781104.1\|1280237_1280759_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.21073e-13
NZ_CP012109.1\|WP_002638859.1\|1280889_1282083_-\|M48-family-metalloprotease	gnl\|CDD\|320702	cd07343, M48A_Zmpste24p_like, Peptidase M48 subfamily A, a type 1 CaaX endopeptidase. This family contains peptidase family M48 subfamily A which includes a number of well-characterized genes such as those found in humans (ZMPSTE24, also known as farnesylated protein-converting enzyme 1 or FACE-1 or Hs Ste24), Taenia solium metacestode (TsSte24p), Arabidopsis (AtSte24) and yeast (Ste24p). Ste24p contains the zinc metalloprotease motif (HEXXH), likely exposed on the cytoplasmic side. It is thought to be intimately associated with the endoplasmic reticulum (ER), regardless of whether its genes possess the conventional signal motif (KKXX) in the C-terminal. Proteins in this family proteolytically remove the C-terminal three residues of farnesylated proteins. Ste24p is involved in the post-translational processing of prelamin A to mature lamin A, a major component of the nuclear envelope. ZmpSte24 deficiency causes an accumulation of prelamin A leading to lipodystrophy and other disease phenotypes, while mutations in this gene or in that encoding its substrate, prelamin A, result in a series of human inherited diseases known as laminopathies, the most severe of which are Hutchinson Gilford progeria syndrome (HGPS) and restrictive dermopathy (RD) which arise due to unsuccessful maturation of prelamin A. Two forms of mandibuloacral dysplasia, a condition that causes a variety of abnormalities involving bone development, skin pigmentation, and fat distribution, are caused by mutations in two different genes; mutations in the LMNA gene, which normally provides instructions for making lamin A and lamin C, cause mandibuloacral dysplasia with A-type lipodystrophy (MAD-A), and mutations in the ZMPSTE24 gene cause mandibuloacral dysplasia with B-type lipodystrophy (MAD-B). Within cells, these genes are involved in maintaining the structure of the nucleus and may play a role in many cellular processes. Certain HIV protease inhibitors have been shown to inhibit the enzymatic activity of ZMPSTE24, but not enzymes involved in prelamin A processing.	8.0675e-61
NZ_CP012109.1\|WP_002638864.1\|1286890_1287562_-\|polyhydroxyalkanoate-synthesis-regulator-DNA-binding-domain-containing-protein	gnl\|CDD\|369568	pfam07879, PHB_acc_N, PHB/PHA accumulation regulator DNA-binding domain. This domain is found at the N-terminus of the Polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA. The invariant nature of this domain compared to the C-terminal pfam05233 domain(s) suggests that it contains the DNA-binding function.	1.08576e-30
NZ_CP012109.1\|WP_044889635.1\|1278116_1278572_-\|Holliday-junction-resolvase-RuvX	gnl\|CDD\|335420	pfam03652, RuvX, Holliday junction resolvase. This family of nucleases resolves the Holliday junction intermediates in genetic recombination.	1.68905e-63
NZ_CP012109.1\|WP_002638861.1\|1284624_1285539_-\|ArsA-family-ATPase	gnl\|CDD\|349755	cd02035, ArsA, Arsenical pump-driving ATPase ArsA. ArsA ATPase functions as an efflux pump located on the inner membrane of the cell. This ATP-driven oxyanion pump catalyzes the extrusion of arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents. The pump is composed of two subunits, the catalytic ArsA subunit and the membrane subunit ArsB, which are encoded by arsA and arsB genes, respectively. Arsenic efflux in bacteria is catalyzed by either ArsB alone or by ArsAB complex. The ATP-coupled pump, however, is more efficient. ArsA is composed of two homologous halves, A1 and A2, connected by a short linker sequence.	2.76e-40
NZ_CP012109.1\|WP_082282904.1\|1299585_1301409_-\|Hsp70-family-protein	gnl\|CDD\|212667	cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family. HSP70 (70-kDa heat shock protein) family chaperones assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some HSP70 family members are not chaperones but instead, function as NEFs to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle, some may function as both chaperones and NEFs.	6.35646e-103
NZ_CP012109.1\|WP_002638871.1\|1296569_1297388_-\|EI24-domain-containing-protein	gnl\|CDD\|377798	pfam07264, EI24, Etoposide-induced protein 2.4 (EI24). This family contains a number of eukaryotic etoposide-induced 2.4 (EI24) proteins approximately 350 residues long as well as bacterial CysZ proteins (formerly known as DUF540). In cells treated with the cytotoxic drug etoposide, EI24 is induced by p53. It has been suggested to play an important role in negative cell growth control.	3.15257e-13
NZ_CP012109.1\|WP_044889631.1\|1293128_1296359_-\|PDZ-domain-containing-protein	gnl\|CDD\|274843	TIGR03900, carboxyl-terminal_protease_family_protein, putative carboxyl-terminal-processing protease, deltaproteobacterial. This model describes a multidomain protein of about 1070 residues, restricted to the order Myxococcales in the Deltaproteobacteria. Members contain a PDZ domain (pfam00595), an S41 family peptidase domain (pfam03572), and an SH3 domain (pfam06347). A core region of this family, including PDZ and S41 regions, is described by TIGR00225, C-terminal processing peptidase, which recognizes the Prc protease. The species distribution of this family approximates that of largely Deltaproteobacterial C-terminal putative protein-sorting domain, TIGR03901, analogous to LPXTG and PEP-CTERM, but the co-occurrence may reflect shared restriction to the Myxococcales rather than a substrate/target relationship.	0
NZ_CP012109.1\|WP_002638867.1\|1291332_1292058_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176506	cd08563, GDPD_TtGDE_like, Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.	3.14604e-62
NZ_CP012109.1\|WP_044889673.1\|1290993_1291221_-\|twin-arginine-translocase-TatA/TatE-family-subunit	gnl\|CDD\|184862	PRK14860, tatA, twin arginine translocase protein A; Provisional.	1.07e-11
NZ_CP012109.1\|WP_044889675.1\|1282140_1283283_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	0.0034322

>NZ_CP012109.1|WP_002638864.1|1286890_1287562_-|polyhydroxyalkanoate-synthesis-regulator-DNA-binding-domain-containing-protein
MSEAEQAGAPNKEPKIIKRYTNRKLYDTVESRYVTLDEIAAMIKEGTEVRIVDNRTKEDLTSVTLAQIIFEEEKKKNQMPLSVLREIIRHPGESISGFIQKEVSPRVASIREEAESRLDKLLRRDENAPRAEGEAEEAPAEAPAETPDAAAAGLSPADLLKASQRAFEEWQRRIDERVKHVVENLTGNLPALGRDMATLTQRLEELEKKLAEVEQQKQPPKPE
>NZ_CP012109.1|WP_002638863.1|1286079_1286880_+|ParA-family-protein
MRRIAFINEKGGTCKTTLAVNTAAWLAKERGLRVLLVDLDTQGHAGKALGVDVRTLPRNVFHLLTDASVTFEDVVQRSALEGLDVLPAYKEMSDFPVVVASDARRAHRLADRLRAAEAAGYDAIVFDAPPSMGTTTRNILVAATEVVVPVALTYLALDGCAEVADTVRQVGEAEGRPDLRVTKVVPTLYRKTALATAILERLKAYFPDALAATPLGYDVKVDEAQSHGQTIWEYAPRSRGAQMLAAIAAELHGEPAPKRRRAARKA
>NZ_CP012109.1|WP_044889674.1|1285709_1286018_+|hypothetical-protein
MLKNNPVMKKLVETGEERIGKLAQQLLSNEKFVTAVQTLVSRSLAAKGTLDSALRTALSAANLPSTADLEQLRSKVDDLERLLSSVEGKVDTLLASKAPQKK
>NZ_CP012109.1|WP_002638861.1|1284624_1285539_-|ArsA-family-ATPase
MAGLLDKRLWIVSGKGGVGKSTVAAALALRSARAGKRTLVCEVNTQERVSRFLERPEAGPEIRLLEENLWAVNVRPQEAMREYGLMVLRFETLYKTVFENRLSRQFLRFIPSLQELVLLGKIMFHLQEKLPDGRWRFDTIVMDAPATGHAISFLSVPQVLIQTVPPGPMAREAQKMRDLLVDPSVTAAVLVALPEEMPVNEALELHAALRDKVSLRTHAAVLNQSFPERFTGADLEALQGHPELLAVAQAHHDRATQAVLAGTKLERNLHAPVYPVPRLFTPEFGRKAIEQVMEHLEPLVTGAK
>NZ_CP012109.1|WP_044889634.1|1283515_1284628_-|ArsA-family-ATPase
MSTPLAPALAGKRVLICVGSGGVGKTTAAAALALRASADGRSSLVCTIDPAKRLANSLGLTALGNAETRVPATALEPLGIQPRAPLYAMMLDMKQTWDELIARVASPEQRERILSNRFYQSLSTALAGSQEYISMEKLWELRRSSNYELIVLDTPPTAHALDFLDAPNRVLDFLDNDAAKFLLTPALKAGKLGMSLFNRGGYVMRGLAKFTGTEMLQELSNFLLAISSLNEGFRERARGVRQLLEDPNTGFVLVTSPHPERMDEAIHFHKMLKQHRMEVVSLVVNRVHPMPTPSLWEDAATLTPSRRAKVEETLREQQVMAEQDHAGIAQLQAACPGVPIVQVPRFAMDVHDISALWRTGRYLVGDESHG
>NZ_CP012109.1|WP_044889675.1|1282140_1283283_-|tetratricopeptide-repeat-protein
MPVRRWWWVAALGVAVSGCRTTGSAARDEASASATPRQEIQFDAVTVTADLELDKLNDEELFAAGTSAFAANEFQQAARYFGRLADFFPDSQHRRAALYNAGLSHQRLKEWEEAGHRFSELADPAKGQGDALDAAFRVAEVDYHLERFEQAAKALGTIAARADVPVNRRLEAQVQQGICQLESGAPETAETTLRKALSTYDALEDKGEVDDYFPAQAHFFMGELYRLHYDNVKLAPAKGVDKLSEDLNYKAELLLSAQGHYLRSIRVGNGYWATAAGAQIGAMYENLYEHMVNSPAPAELDASEAEIYRQELRKKVRVLLTKSINIYERTLETAERIGSQSTFVDRTRESLAKVKALLLADAEAEPATSAPSAPVSEPHT
>NZ_CP012109.1|WP_002638859.1|1280889_1282083_-|M48-family-metalloprotease
MEPLFTPEQLAEIHAYHQPYYIRAAVEPFVRLALLLLLLGVLVQPFYRLATAAAAGLERRLGFLRTAPVSRAFFSAMDRLWGEPGWGAAVIFALFTDLFVTLVYLPVDVWFSYTLEHRHGMSTQTPGTFAWDLLKGRLIAAFAIAALVIGLFGLARRLRHWWLVLGVPVALMLLVSSALDPYRGRIYFDQKPLAEGPVRERITGLMKQADIAFADVMVEETSVASRRLQAYFAGQGPTRTIVLNDVILKELSEDEVLAAVAHEAGHVQEPKWPARIASSLALVALLFALDRLLRLSASRGWFGTHRFADIRSLPLLSLLFFFVMVTARPISGAFSREREREADRYALRLTGDVDAFRRMLVKAARVNKMNPEPPRWVVLKGMSHPPIGERLASLPPP
>NZ_CP012109.1|WP_021781104.1|1280237_1280759_+|tetratricopeptide-repeat-protein
MGRVIKHEGAVAMRMQRGAVRNLKAFARGEMTWAEVEGMTFEEAKAIAQVGCDLAAAGRLEEARILFEGLVEGNPKDAAARAALGTVYQKLGKLEDAIAEYSAALEREPDNPVALANRGELYLRKGERQGFTDLANAVEADPHGETAGGRRARALVKAITLMAVEKMKEGAQP
>NZ_CP012109.1|WP_002638857.1|1278773_1280231_+|hypothetical-protein
MLDFLKGAANLLAGPMAGVVDFAGNALGLPPLITNSIKVAAGAATGNVMLAASGAMGAAQELSKNPPAKTEYRASSSSHAKTDNGYAPSSSASSSPILGPGSSPLDPKMLDYADALRVLEANFQQLDLVDGKQSGVLSKKDLKRIAADASLSPQLRDAAGFMVENTAFFERLDRQGPLARIGIFSPLYNLDTFTVKDLRRELTVVESEFAKYGRPTRPGGGGSPSVPGPGGGRPTPPPPTTGGTPGGGSTPGVDRVPPSTPSAVDPDLREYHDVLRILDANWDTFDTAAGVKDNRFTRDSLDAILASPAASSTLKRAAQFLKDHPAYFDRLEMAAGVGTRDGIVGRPDVTAALRQVDAERGGTNGSGGVRGTGGTSSNVRSIVDNPNMSIEDKIQAILMSISSDTDEEILDVMEQMANVRDQRATLGTGESDRKAGAKLESSMQELELRLQRLVEKRKAMFDLMSNMSSKFHEMAKTAISNLRSA
>NZ_CP012109.1|WP_044889635.1|1278116_1278572_-|Holliday-junction-resolvase-RuvX
MRTMGLDLGTKTIGVAVSDGLGLTAQGVTTVRRTSLKADLAALAAVASEYEVRHVVLGMPLNMDGSEGPRAEASRKFADTLAQSLDVTVELWDERLSTVAATRTLLEADVSRARRREVIDQVAAQFILQGWLDARRPADSDYHPDDYDPEP
>NZ_CP012109.1|WP_002638866.1|1290244_1290997_+|hypothetical-protein
MPTQEDARTVARFIHALSGGAEVRRKAAARELAWRDPLDSNELIGELISLSRAGWGPAACALSDFMAALAQESEHIPHVESLRRLANIQSLDTVADLFAQGPAKLEMDADAAARADANAFSQSLGHLKQQARLTKDPDTLSRLATVSNPTVLRNVLINPRLTEELVVRIAARRPARPEPLIEIWKSPRWSVRHAIRRALVFNPYLPPETGAKIVPLLNTGDLRELVANAALHPALRAQAARLLTGGEGTR
>NZ_CP012109.1|WP_044889673.1|1290993_1291221_-|twin-arginine-translocase-TatA/TatE-family-subunit
MLGLGLGEIIVLGFILLVVFSAARMGQLGNAVGKFVYSFRKASRGDDLVDAKPLPPARRSTSDAEFTEPEQPRRR
>NZ_CP012109.1|WP_002638867.1|1291332_1292058_+|glycerophosphodiester-phosphodiesterase
MLLLAHRGASADAPENTLEAFAEAARQGADGVELDAMLCGSGEVVVCHDERLERLARLPWEVRLTPWWKLQRADVGSPLGFAPARIPLLEEVLGALPPQFLVNIELKCERADDGGLAEQVARLVRKHGLAGRVVISSFNPLCLFRLAAAAPELRRGLLIDPDKSWAVQAYAVSPLVSSHSVHPFHEACTPERVAGWRASGLSVAAWTVDDAQRAHELERMGISYLITNRPGAVRQALHPAG
>NZ_CP012109.1|WP_002638868.1|1292061_1292958_-|hypothetical-protein
MRTFSRWLALAAWAAGASALAGPNDLEIARFGNPTGDNAVASADADFQAFARIMGAAITSVNLMPPETTGHSAWAINAELSVVSLPGSVNIPTQREQPSTVLIPSFHARKGLPFSLELGGRVGWVEESSQVVATGEVKWAANEGFTYLPDFGVRGHVTKLFGARDLSLTVMGLDFGVGKQFPLGGMVTLTPYGGLDLGFVGATSSRIDFNQDRSFDDTTGDDSREALTDTAVYRKVGFGSNINQRIYGGVRFIGGVLQLGAELSLTRTGSVSYQENGNTVERGLPAVFAFNTTLGLDF
>NZ_CP012109.1|WP_044889631.1|1293128_1296359_-|PDZ-domain-containing-protein
MNQMPRFLRRITAVAVLLGAWALVGNDRAPLPLTMGAAEAGQGSWDGSLPAAKGEKAPHDLNSLRVLTKVILYVKENYVDPKRVKPKEMMIASLEYVEKSVPDVLVDGNAETGKLNVNVNGKQREFDIAHVDSLWKMSFALKDVFDFLSKNMRPIEDTRDVEYAAVNGMLSTLDPHSVLLRPELYREMKLSTKGEFGGLGFVIQMREGNLTVVKVIPKTPAHRAGIQKDDRIKKIGEESTVNMDLNEAVSKLRGPVDSRITITVERDGWEKPRIMTLARAMISIESVQHKLLANNVGYIRLKNFQGNTTRDLEAALTQMRKQADAKGGFKGLVLDMRGNPGGLLEQAIQVSDTFLSSGTIVATVGLSDKLREEKRARPTEGEDTYPIAVLVNAGSASASEIVAGALKNLDRATIIGRQTFGKGSVQVLYDFPDDSALKLTIAKYLTPGDVSIQEVGIVPDIQLIPTRATDERVDVFAPRRSMGEADLDQHFGNPDSTTVAKKREDVLDREKPLVTLKYLKVDEKQAQATAKKEKEEGKAAPKTAANDKKHGDKDPLLDVDVAGSGEDLDDQLDAEAQEEIKEDFEVVFARDFVLRAPATTRKEQLKQGKTFIDQKRAEEETRINGAIAALGVDWSAGPTPKNVQMAVSMTPGPEAKIAAGEVMEMALTAENRGTEPLKRVRAWTESDNAFLDRREFLFGALAPGEKKTWKVKVRLPKDLTSRRDDVTVRFFDDNGVLPETRVAELNFVELPRPAFAFNWQVIDDCATCNGDGTVQRGETVSVLLDVTNAGTGPALDSFTQIKNGGDANIFIEKGRFKLGELKPGETKTARFQLEVKKGFKGDTFPLKLAIIDEPLEEFVMEKLELPVTDGAVATMEPKKGLVRLGDKVDLYGAPTQAARPVAKLSGTTVLASEAATKGFYRVELEKDRFAFVRSQDAKEVKSGKATAPKATLATNHRPPDIRLDVDPAAGGLVANGDKFTLSGVVTDPHGLLDVYVLVNDQKVYFKGVDPKGSEPNTLKFSTEFALKEGNNNVLVVAREDSDFASRRTLVIRRRPAEVAQKMAAQAGNPAGKQQQQ
>NZ_CP012109.1|WP_002638871.1|1296569_1297388_-|EI24-domain-containing-protein
MSPHSVLPHVAPEPRLSDFFQGLGLLGRAFSLILRDRRLFLLSALCAAVTAVALVGLVWLLWTYAPGALASVWARPESWYGRAAWSTVLILSSLVLWVVGANVVPPLLLAPLQDPLSEMTEEAWGGSPGAAFTLGGFLRGLVTGIAHTLARLFFLLAGLAILLPLHLIPGVGSVLWTVLGSLWTTMWMAGEFLAAPMTRHLYPFAEVRRMMRERRALCLGLGAGIYVLLWVPILNTFFLPVAIVAGTLLYGGLREARLLPPPPGASSTAALK
>NZ_CP012109.1|WP_002638872.1|1297447_1298785_+|glutamate--cysteine-ligase
MSLDLKRAASEPISSVDMLVAGFRAAEKPRGAHRLGLEHEKFIYPVGGAEPPTYEGAQGVGALLNRVSAAGYTPFRETPESPVIALQRGGATISLEPGGQLELSGSPFVTAREAHAENLTHLSEVSAAADALGLRLVFLGYRPFGTTAQMPWMPKTRYLIMRRTLPERGRLALNMMLMTSTGQVSLDWADEADCVRKTVVVARLAPLMNALYANSPIVEGKPSGYMSFRNRVWDEVDPTRCGYLPAFFDGSFSYQAYVEWALDAPLLFLRRNNEYLYPKMTFRQLLKDGFEGKPPDLNDWTDHLSTLFPEVRLKTVVEVRGADCVNPAMTGALAALWRGILYDATALEEAERLLPKLSYADHLAFHDTARREGLAGRMGTQEIHRLAAEMVAISRRGLERLDALDAPLLEPLAEVAASGRSPAQAVLEAWEKNPRPEALLDGFGR
>NZ_CP012109.1|WP_044889630.1|1298798_1299467_-|hypothetical-protein
MASFPVTDFPGRDAMRRSIVGGVATAALGMAGPAFAVEAQQVGERLRVEERPTVGIDARVGLGNFTGDLGRNTRVGPLFGITASAYPWEHGGVEVGYEGQRLPIRDERLRDDGRGEGVWRNNATLLAKAGPLIKEKWRPFVGVGVGLSYLNPSDGADAYYNNDWQTELPVAAGLDFRLGHLVAGARATYRFVGGEGLVRNPVTNADEKGSLFNGNVMIGGQF
>NZ_CP012109.1|WP_082282904.1|1299585_1301409_-|Hsp70-family-protein
MTQPSPGKEPTTPDAPATSTGDTTEPEAPRDEAGTRAPSAAAALPSRAEPEPTPAVALDADAPRNRRRALFEVPVPAPTSAPASPEVVLGIDLGTTQARVAFVRDGTPTLIPLPGTTATDLPALIAVNGSGDLVVGASAQLEGSRAPRRAVPGLKRLLGLKPRSPQLRWLAPLLPYPVTTDTNGDAAVEVRGRVISPTLFTAMLLRELKHAAATHLGRKPTRAVICAPTHFTDRQCAALREAATLAGLDAQRILIAPAAAALAYAHGRGLARKRVLVVDLGGGGLQVCVVQVTGDDLEVITTGGDATLGGMDFDGRIAEALASDLSEQGVPKPDHPLDWMPLRAAAESTKVALSTQEQVDVTLPSGTVPPFNRERVEALTADLAQRVTTVVRDVLDSNALSPQGLDAVLLVGGQSATPMVRRRLEESLGVSVREDVDAKNSVALGAALLGQGLLLAEVGKPAATVSEVLSSPLAVAERGGTLRRVLERNTRLPATKTLVVPCAPGPLEVALFQGTSAQANDAEYLGRLALNVERAGEVELHFALTADGALSLEATLPGVKRHAVPLGTEPLDDAAFDALIARSPWEPAPEPRPGGLLSGIKKLFGRR
>NZ_CP012109.1|WP_162492073.1|1301539_1302865_+|hypothetical-protein
MSVASPDSALRLAVDAGCFSSEPCETAAESVRAADVDVLATSSVSALTVAATAVGFSSERCEVVDAADAGVLATSSASALTLAETAGCFSSELREWRAEVAGAAGAGVSARSSESALTLAETAGCFSSELCEWGADVAGAADAGMLATSFVSALTLAATRGRCSSELCEWGADVAGTADASVSAALSVSALACAVTAGCCSSELCELGAEVAGAANADVLAAWPVSVLTLAVTAGCFSSDCCSMGAEVTGARDAGVAATSSVLTLSLVEGCFSSELRAMGAEVVGVLATSFVSALALAAPESSLSSDLCEMGAEAAGVVATSPVSALAPAAPEGSLSSDLCEMGAEEAGVVATSSVSALALAAPAGSLSSDLREMGAEVAGVVATSSVSALARAAPEACSSSELSERGRRATGVSEAGCSDEGTPMLAPAPTVEADCCSSE

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Crispr_ID: NZ_CP012109_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_6

1599417-1599524

Orphan

Consensus_repeat	Method
ATCGCTAAGCGACACGTCGTAATGGGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_6

>merge|NZ_CP012109|6|1599417-1599524|CRISPRCasFinder
ATCGCTAAGCGACACGTCGTAATGGGCGCACGGGTCAGCGCGCCTTGAGGTGCAGGGCGGCGCGAGTCGCCCAAGTCCCATCGCTAAGCGACACGTCGTATGGGCGCG

>NZ_CP012109|6|5|1599417-1599524|CRISPRCasFinder
ATCGCTAAGCGACACGTCGTAATGGGCGC	ACGGGTCAGCGCGCCTTGAGGTGCAGGGCGGCGCGAGTCGCCCAAGTCCC
ATCGCTAAGCGACACGTCGTATGGGCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_044889593.1\|1606252_1607359_+\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|224771
NZ_CP012109.1\|WP_002634323.1\|1603364_1603943_+\|FxsA-family-protein	unknown	unknown	gnl\|CDD\|377238
NZ_CP012109.1\|WP_002634312.1\|1608821_1609433_+\|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl\|CDD\|376889
NZ_CP012109.1\|WP_002634335.1\|1588254_1588992_+\|inorganic-pyrophosphatase	unknown	unknown	gnl\|CDD\|179080
NZ_CP012109.1\|WP_002634332.1\|1590792_1592238_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224405
NZ_CP012109.1\|WP_002634330.1\|1593490_1595992_+\|type-VI-secretion-system-tip-protein-VgrG	unknown	unknown	gnl\|CDD\|274542
NZ_CP012109.1\|WP_044889564.1\|1602755_1603289_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002634338.1\|1584746_1586489_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044889596.1\|1599595_1600711_-\|glycerate-kinase	unknown	unknown	gnl\|CDD\|376844
NZ_CP012109.1\|WP_002634328.1\|1598071_1599253_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_082282694.1\|1588998_1590183_-\|TonB-family-protein	unknown	unknown	gnl\|CDD\|367555
NZ_CP012109.1\|WP_002634321.1\|1603959_1605108_-\|acyltransferase	unknown	unknown	gnl\|CDD\|376607
NZ_CP012109.1\|WP_002634313.1\|1607982_1608825_+\|cytochrome-c	unknown	unknown	gnl\|CDD\|365823
NZ_CP012109.1\|WP_002634336.1\|1587520_1588258_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP012109.1\|WP_044889597.1\|1586519_1587524_+\|EF-P-lysine-aminoacylase-GenX	unknown	unknown	gnl\|CDD\|273090
NZ_CP012109.1\|WP_002634331.1\|1592249_1593227_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240363
NZ_CP012109.1\|WP_002634326.1\|1600925_1601414_-\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|308985
NZ_CP012109.1\|WP_044889563.1\|1607400_1607799_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002634325.1\|1601424_1602726_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|224017
NZ_CP012109.1\|WP_002634329.1\|1596040_1598059_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368185

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_044889593.1\|1606252_1607359_+\|c-type-cytochrome	gnl\|CDD\|224771	COG1858, MauG, Cytochrome c peroxidase [Inorganic ion transport and metabolism].	1.69773e-97
NZ_CP012109.1\|WP_002634323.1\|1603364_1603943_+\|FxsA-family-protein	gnl\|CDD\|377238	pfam04186, FxsA, FxsA cytoplasmic membrane protein. This is a bacterial family of cytoplasmic membrane proteins. It includes two transmembrane regions. The molecular function of FxsA is unknown, but in Escherichia coli its over-expression has been shown to alleviate the exclusion of phage T7 in those cells with an F plasmid.	1.79415e-37
NZ_CP012109.1\|WP_002634312.1\|1608821_1609433_+\|respiratory-nitrate-reductase-subunit-gamma	gnl\|CDD\|376889	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit. This family is the gamma subunit of the nitrate reductase enzyme, the gamma subunit is a b-type cytochrome that receives electrons from the quinone pool. It then transfers these via the iron-sulfur clusters of the beta subunit to the molybdenum cofactor found in the alpha subunit. The nitrate reductase enzyme, EC:1.7.99.4 catalyzes the conversion of nitrite to nitrate via the reduction of an acceptor. The nitrate reductase enzyme is composed of three subunits. Nitrate is the most widely used alternative electron acceptor after oxygen.	2.57107e-24
NZ_CP012109.1\|WP_002634335.1\|1588254_1588992_+\|inorganic-pyrophosphatase	gnl\|CDD\|179080	PRK00642, PRK00642, inorganic pyrophosphatase; Provisional.	1.19193e-130
NZ_CP012109.1\|WP_002634332.1\|1590792_1592238_+\|hypothetical-protein	gnl\|CDD\|224405	COG1488, PncB, Nicotinic acid phosphoribosyltransferase [Coenzyme metabolism].	1.20607e-32
NZ_CP012109.1\|WP_002634330.1\|1593490_1595992_+\|type-VI-secretion-system-tip-protein-VgrG	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	0
NZ_CP012109.1\|WP_002634326.1\|1600925_1601414_-\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|308985	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain. This family of proteins contains 8 conserved cysteines. It has in the past been annotated as being one of the complex of proteins of the flagellar Fli complex. However this was due to a mis-annotation of the original Salmonella LT2 Genbank entry of 'fliB'. With all its conserved cysteines it is possibly a domain that chelates iron or zinc ions.	0.00036612
NZ_CP012109.1\|WP_044889596.1\|1599595_1600711_-\|glycerate-kinase	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	9.03781e-157
NZ_CP012109.1\|WP_082282694.1\|1588998_1590183_-\|TonB-family-protein	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	5.25888e-05
NZ_CP012109.1\|WP_002634321.1\|1603959_1605108_-\|acyltransferase	gnl\|CDD\|376607	pfam01757, Acyl_transf_3, Acyltransferase family. This family includes a range of acyltransferase enzymes. This domain is found in many as yet uncharacterized C. elegans proteins and it is approximately 300 amino acids long.	9.22146e-17
NZ_CP012109.1\|WP_002634313.1\|1607982_1608825_+\|cytochrome-c	gnl\|CDD\|365823	pfam00034, Cytochrom_C, Cytochrome c. The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family.	1.36799e-16
NZ_CP012109.1\|WP_002634336.1\|1587520_1588258_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	4.22818e-62
NZ_CP012109.1\|WP_044889597.1\|1586519_1587524_+\|EF-P-lysine-aminoacylase-GenX	gnl\|CDD\|273090	TIGR00462, genX, EF-P lysine aminoacylase GenX. Many Gram-negative bacteria have a protein closely homologous to the C-terminal region of lysyl-tRNA synthetase (LysS). Multiple sequence alignment of these proteins with the homologous regions of collected LysS proteins shows that these proteins form a distinct set rather than just similar truncations of LysS. The protein is termed GenX after its designation in E. coli. Interestingly, genX often is located near a homolog of lysine-2,3-aminomutase. Its function is unknown. [Unknown function, General].	8.43105e-148
NZ_CP012109.1\|WP_002634331.1\|1592249_1593227_+\|hypothetical-protein	gnl\|CDD\|240363	PTZ00331, PTZ00331, alpha/beta hydrolase; Provisional.	1.8274e-05
NZ_CP012109.1\|WP_002634325.1\|1601424_1602726_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|224017	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only].	2.33617e-115
NZ_CP012109.1\|WP_002634329.1\|1596040_1598059_+\|hypothetical-protein	gnl\|CDD\|368185	pfam04909, Amidohydro_2, Amidohydrolase. These proteins are amidohydrolases that are related to pfam01979.	0.00514602

>NZ_CP012109.1|WP_002634328.1|1598071_1599253_+|hypothetical-protein
MDSKPTPNQAGGAAPGSKDPLLLTPGMPGPAAPSRLRSPFPWNKVALLTAIPEPDSVAVITLDDKLWRLKIEGNEVRRIELDDEYLEQASGGELHPLLPPSPTQLAYLQTRRLVIYDLKWQQAKTWSLAGTLEEVASRGGWVSTEPPVLAVELEDTTNFLTEDRIDFRLRTWRLNGDKRAQLGMLELGSVVGAVKWDAGAGLIAVQRPGAPLELYGPDLGKPQPEHPLALALRKLLVDGLTVQSLRLHHSLPVALVALGRDAVPKREEGKPPPEEPGIWRVSWEGSAVTARVARYASGESLSLGALSPEHDWVHYRVTDASGKNPHLYVQQVAAALKPPLALGPVPESGAALLWTGGATSLVMYDGTKDTLVQWKLAGAAPAKPPASTKPDGK
>NZ_CP012109.1|WP_002634329.1|1596040_1598059_+|hypothetical-protein
METYVVKDGDSPDAIAQKYGFKEWKLIYEHPDNGALRATRGANEIKADDRVLIPDLPENNISAGGPQALIATSGRPLVLPPVHFDAHMHIMSGNCTPMPAIVQMMKDKGLGWAIDTGTSRTAVNRLGWWVARVPFGLAPEIGDLSHRTTLRIGQEAVRLSNSLVVDEIRVAATGMGGATTYEVPATFRSYPSSKGHYEARKSYLGMSVVLTMDMDYCHLDGYQGEPVYSTESTEDGPRITYRWRTDSHKEGEKIVASSSEVDLHETWTRQMLHTARAAAENPFRLLPMYHFEPRRYIKSAKKETPFSKVVTASQAAPFLGFKMYSPQGYMPVERHSQVKGVLSWFFGECEKKDIPIMTHCTPAGFYTHERRFYLDNEPDEAIRKDAKYAPDREKLEAADKAIYQAREHLKEVEDSWVRRNIPLNVRRAKGAIEDAIEAREAVLNPGRMRYFYENYVHPEAWRPLLKSHPKLRLCLAHFASDGSFWNWRKGLTVTTDGQKIVYDKSWIGSIIELCNEYENFYTDISYLDLMDGEKWKLLADILKKHPWMLKKVMFGTDWYMITAEPVAYADWYSRTLRGLEFIQKELPTQVNLFTQFATVNPTRFYRLMEVAPKMKEGLKTLQGRLDIKGTPVDLLEDNFTTLMRLQSPLEQLDKAGGLASGPIHYTASSKPK
>NZ_CP012109.1|WP_002634330.1|1593490_1595992_+|type-VI-secretion-system-tip-protein-VgrG
MAASINPSAFKVQVGAHGVDALFVTGVSGTEALSHLFDFRVDFFARDGEPLDTTELVGKDALLTISIRDSAPRQVHGWVREVESLGMKTGRRRYRAHVVPKLWRLTQQHRSRIFQHKSVPEILKDVLGEAGVKTRQALSGTYASRDYCVQYRESDFAFISRLMEWEGIFYFFEHSEDGHTLVLGDKPSAHAPLPQGARLPLRPHLGKEVVDGEYLSSLELVHRLRPGAVHVKDFDFEKPSLDISGKANAPEGVTALELYEYPAGYVEPGVGKATSNVRSEAASMGGRTLSGQGVAPRLTPGFLLEVQAPEDGTFAGEYLVTEVTHSGTQPEVTPDSEALQGVYRNQYQLLPKAVPYRPRRLTPLPQIAGPQTATVVGPAGEEIHTDGHGRIKVQFHWDRAGKRDDKASCWVRVGQPWGGPAWGDVWLPRIGQEVVVRFLEGDPDRPLVAGAVYNGANTVPYGLPGEKTKSTRKSASSLGSDGFNEVRVEDATGQEEVFTHAQKDEDLLTENDKDQQVRGYEDLLVKKDRKRTVEGNQELRVGADDVSIVEKNQTLLVQGNRSSTTTQSHSEEVEGNQVMTVGGNLTGLVLQGAMENVGAAKATTIGGAYSVNVALAYNEATGGARALQVGAAHTEHVLGVRQETVAKDKTVDVGGGWDLRTKGQLTLTIGKDWDEDIGKKTGIFVTDVMAGLSKKFELKADTFSLIVGDNLILKMEKSGKVTFALKTLTVDGKEVKIKGAKVKMEAAGSLKSDKRKAEELEHLKDPDPLNVEFTLKDINGKPVKDQPFELHMPDGSIKKGNVDGSGKAVVEKVPPGDYRVVFPEMSGRINKGS
>NZ_CP012109.1|WP_002634331.1|1592249_1593227_+|hypothetical-protein
MRLPIPRFHDEARVSQLHLERGAEVAEEALRYAAEHRIRPAREDAVRVAAFGIDVQVAFCTPGASLFVPGAVEDTQRTLRWLYANLDRVTELVFSLDTHRAFHVFHPSWWRDAEGRPPPPLTAITAGDVRSGRWRATRFHEESLAYCEQLEASGRYVLTVWPFHAMLGGLSHALVPSMFEASLFHALVRDVPTHFELKGEHPLTENYSVLSPEVTEVKGQTVGAFNTRLFDHLMSFDRVYVFGQASSHCVLNTLLDLRRHIERTDPSKMGRVYILEDAMSPVPAPPLEPLPPSLDFPRLAREALSEFQAAGMRVVRTTDGVDVGT
>NZ_CP012109.1|WP_002634332.1|1590792_1592238_+|hypothetical-protein
MATSLLATDGYKFSMAEAGWPLRRETFYYSHRRGGLQVMPLDVAAFVQSLIPEPKAEDYDYLSRYDYEMGVGFKAAILRREKLSIRAIPKGALFYPREPILTISGPSALVSWMEPLLLQLNFRIQVATLGLSDRDALARALATVTCEEQKAIALETLDAVGVKGVSITVDSEGYAKRVTATVKELVDIVEDPARIFEVGLRAATCLEQHELALRSCKDAGVTRTSNVEGAAKLGMIPVGTMGHEHIQRYGSDDAAFRAMRERRPQRSSYLLDTFDTLTSGIPAAFQLIREEPGNNDSIRFDSGNKKLQYLYAVTLARDIGIRPVNILEDGLDAEATREFEALRRQVGWEPSAQFYGYGGHIVARTMDCPLTRDRVAAIYKLSRTGNTPVMKFGNELAEGKKSIPGEPVLFRRRHGSGPIGLVGQLGEAVPDGYFPLMESAPEAPSLVGALESAKEARVAYTAATQALVDDLHRRHFPQQQR
>NZ_CP012109.1|WP_082282694.1|1588998_1590183_-|TonB-family-protein
MSEPPARDTEPPATEALSESPARDTEPPATEVPSEPLARDTKPPATEVPSEPLARDTKPPATEALSEPLARDTEPPATEALSEPLARDTKPPATEALSEPLARDTAPTVSQPAPMDIPRVEPRPSDIPVAGSRLLLAARQLTPLSNGAQGPVAELDAGVADRHASPSTQALVEDIVSESVGRGRVDRGLVHPYYGQLGKALMKAWDADRSVKEHGLQGYFDMGMERGRAYSRVWMERAADYGASGSFAAKNGPGEDRRRPITTAGDPTLNARREMRQQMRQEFRTTRRALIRVVQDAQGQLLDVQLLEPSHQPEVDKEAIKDVRTAAEKLPPPPAEAVGGRARISSVWEFELIISISPPIPTFSFEFDEALGFIDTRLPLDRRIYKRVRLVEVR
>NZ_CP012109.1|WP_002634335.1|1588254_1588992_+|inorganic-pyrophosphatase
MKKPIQTTSQAHPWHGITPGEDAPEIVTAYIEIVPTDAVKYELDKESGILKLDRPQRFSSQCPTLYGFIPQTYCDELVAKRCAERTGRKDIKGDGDAMDICVLTEKVISNGNLLVRAIPIGGFRMVDGDEADDKIIAVLESDLVYGELQHIAQLPRALLDRLKHYFLTYKQIPGEGKRSVEIAEVYDQPEAIEVIKRSMKDYERIYGPQITTQARKTRVRGAAVEAKIAKPSKAKAKAARKSRAS
>NZ_CP012109.1|WP_002634336.1|1587520_1588258_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MIRKLLQTAFAGTAAVGITGVISPLVSALSLRDAKDADGLLTLWGRSVLGSAGVRHEAVGLENVPEDTNVVFVSNHQSHYDALVNFAHIRKHTRYVAKAELFRIPVFGPALRRAGNIPVERTGGSGDRARLSEAVTALRERVSVLFFAEGTRSTDGRLRPFKKGAATLAIQAGVPVVPLAVSGTRLILPKGGRAVRWGQRVTLMVGKPIPTQGLTMQDRDALTRQLEDAVAELYAEACRRSGDTP
>NZ_CP012109.1|WP_044889597.1|1586519_1587524_+|EF-P-lysine-aminoacylase-GenX
MPNLSQWRAARGRQSLYSALRRFFAAHGYLEVETPLLIPTPGMEPHINAFEAGFIPETDVGSARTLYLHTSPEYAMKRLLADGAGPLFQLCKVFRNGEVSPTHNPEFTMLEFYRPQADYHAIMDDLEGALAEAGRSATEGEPGADPAFFTRTPYERLTVRDAVLRATGVDIRLHSDGPSLKRAAEAAGVRTGDAQSFDDVFFHLFLQKVETGLGHERPTFLIEYPASMAALSRLKPGDSTVAERVELYAKGLELANGFSELTDPVEQRTRLMEEQELRRQLGRSVYPLDERFLDAVGRMPPSAGIAVGLDRILMLLLGVQRISDVLLFPAHEFV
>NZ_CP012109.1|WP_002634338.1|1584746_1586489_-|hypothetical-protein
MHPRIPLLLAFACCLSACPKGPPNDGRQSLTEKQQLQADVGAMATKAEALLENQSRLVWGFWTEGKHVDVAGTYTGHEALFTVESIRRIDRLRNLTDDAREVRALTALHSHFAGEYLSHALAEFNDAAANLEASLTFTVDGKELRYRDLERLLANERTAARRRAMYTAATPAIERLNQTLRRREERAEELVRELGFDSYEAFGSELRQSDLGRLSVLAEEILQATQAPYRVVMERLSQRELGMPFKDITRADIPRLFRAREVEDAFPKGESLLKAHGTLSGMNLDLSELTNVTIDARELKGKSSRPLALAVKVPSDVRISFRPGTGVLHQARVLHEFGHALHAAFTKETRFELARLGNPTVGEAYSALFEDLLEDPVWLEEHAGVSGEQRSQYLATSSAHKLYLIRRAAGRLLYQLELHRRVEADPKALYREIMSRSDDIPLKDVDVERYLVDQEDFFQSADSFRAWFLAGQLQAQLKARFGPAWWRAPQAGDFLKGLWAKGNALSAREVAQAIGEKGIEPDVLLLRLGTTLQVPMKLNLEGVEDAILPAAPGLEDFTQPPPAPGLEEFSAPQTPPAPKP
>NZ_CP012109.1|WP_044889596.1|1599595_1600711_-|glycerate-kinase
MISPRWLVAPQEFKGTLTAAEAAEAMAQGLRESSPEVVLDVAPLADGGPGTVDALLTGLRGERHSLVVRGPLGAPVEAHWALVENGRTAVVEMAAASGLSLLPPESRDARNASTYGTGELMRAALESGCERLIVGLGGSATTDAGTGALSALGFRFLDAAGQPLPPGGAALARLATVDASARHPRLGAVELLGATDVTSPLLGPDGAARLFGPQKGADAADVEALEAALAHVAGVLGETSAGWPGAGAAGGFGFGLLALAGARLVPGYELVSRALGLERRVLMADVVLTGEGRFDRQTSLGKGPGGIARLAREHGTPVVLFAGQVRRDEGLELDLFHEVVELASQARPGEDAATTLCEAAARWAAQRLKAR
>NZ_CP012109.1|WP_002634326.1|1600925_1601414_-|YkgJ-family-cysteine-cluster-protein
MRTRDDWDEEDDAPRGGTRERERALKEVRAVYRQADAAYAPYSCPASGECCQLAVTRRQPWLWQPEWELLSRGRPLPPPRADGGCPYLDATGLRCSVYADRPFGCRTFFCERIRGPARQPAEMVATLLERLERVSQRVAPSLKAPRPLLDWHAEAWRDAEKT
>NZ_CP012109.1|WP_002634325.1|1601424_1602726_-|class-I-SAM-dependent-methyltransferase
MPTSSKPPRPHRGASRPPAPPQGRGRPHARPEKPAPDRTEPELGPDGLPQVSLLRRGVERWQGGHPWIYRADLNGDPGLAGGEVVRVTDSRGWFLGKAFYSKHSKISLRWLSFDDVAVDADFFRERLLAAESLRKLALPGEKTYRLVHGEADGLPGLVVDRYGDFLSAQFLVPAMEQRKELIADLLQAQFNPRGIINRSDVGVRNLEGLVPEKGVLRGERPGPVSFDEGLVKMRADLLEGQKTGAFLDQRENHVMASQYAHGEALDCFSYVGGFALQLATRAKHVTAIEISEAASAQLRENAEANKLSNLDVVVANAFDFLRDAVDDGKRFDTIVLDPPSFAKNKDAIPAAVRGYKEINLRAMQLLRPGGILISASCTYHVDEQGFEDMLASAAADARRRVQIIERRGAGRDHPVLLNLRETRYLKCFVLRVL
>NZ_CP012109.1|WP_044889564.1|1602755_1603289_+|hypothetical-protein
MRYELLLQTMTPGTPYEAARVDALLSQKGATARPDGVRRWSFKHGDVEIGELREGGQVVATELRVPLSDRTDLVREVLAEAVKLATEAGARLVDPQLGRPLTTQDDSSVLEQYVRTARYAGEVAGMPDALGAGSYAMESSTTSTGFQLSGRFLLIAIGILVALYLVVDSMVGQLGGR
>NZ_CP012109.1|WP_002634323.1|1603364_1603943_+|FxsA-family-protein
MFRLLLITCIVLPILELYLLLAIGRQIGPLPTLAWVLVSGMVGAALSRRESRRVLRQAREAMARGQVPEEGLLSGVLVLAGGVLLIIPGVITDVTGLLLLLPPVRRLISARVRRTLERKMRDGSMHVTSFGGGAFGGGFHTSVGGPFPGGPVPRTPYTRAIEEDAGAPARRPQEPQAEVDAEFTEEGPGRRS
>NZ_CP012109.1|WP_002634321.1|1603959_1605108_-|acyltransferase
MRFRDVARVTAYAGDLVSQLGPSFTFQKRETRHPGLDGARGLAVLAMVVGHTLDALLAPAVRAHPWVQTYWTFRGITAPLFLLVSGWAVVAALGSRPTAARDTYGKRLRRALLLIFLGYLVHWPGWSAVRHMGWTEKMLTTVLTFDALQCIGFALLFGATLLALAPVRWGRTVVLVALAVALPLVSSTMWSLGEGLPGPLRQFIGSGGTSRFPFFPWASYFFAGALAAHLLNVLRPGWTQGLALVVLGGGLIWVMRGQEADWGPSSAWLVAYRVGQGLLVLGIVNLLPQRVSGTLAPLGRLSLWIYVLHLPIVYGWASYSGLSSRVGPTLGLLPALSIGVGLLLGCALVARIGSWIRDQARPWRTGSTTLQASVGSLGSRGG
>NZ_CP012109.1|WP_044889593.1|1606252_1607359_+|c-type-cytochrome
MFRNRWVSLLSLSALGAGSLVGCERTPPPAAPVAAPEPEKLPAPKPMSPEQLAHFFKPLPPRKDAPPPPEDTDAQVALGRMLYFEPRLSKNHDVSCNSCHGLTTFGVDNKALSDGHKGLKGTRNSPTVYNAAGHIAQFWDGRADTLEAQATGPILNPVEMAMPDEKRVLATLTSIPEYSKRFREAFPGDKKAVTMVNAARAIAAFERKLVTKSRFDAFVGGKHDALTEQEQRGLQLFATTGCTTCHNGPAVGGTSFQKLGLIEDYPGLKDAGRFDATQSEDDRGKFRVPTLLNVEKTGPYLHDGSVVELPQMVRLMAKHQLARTLTDPEVDDLVAFLKSLTGELPPAEFISAPELPPSTAKTPKADPS
>NZ_CP012109.1|WP_044889563.1|1607400_1607799_+|hypothetical-protein
MDRMLFHAHSGLRYLVLLAGILALAYFAFGLATKKPFDKLGRILGSAYSGLLQLQVLLGVGVLVTRFYYPALIGHIVMMVLAAGVAQATLSINRRKPQPAFVLPLVGVLVSIVFIIGGIMAIGRGVFTSTAM
>NZ_CP012109.1|WP_002634313.1|1607982_1608825_+|cytochrome-c
MRTHAQEGRPRGARRFVPIIPLLAALTAPEAAAQGAARGATLFTQRCATCHTVGEGDRVGPDLHGVMERRDEAWVTRFITSPGEVIDSGDAVATELLARFNGIRMPDQQLSPEERAALYAFFRDCTQKGLGGCKPSPAAKMGTDATPEEIARGRRLFEGTEALAKGGPACFGCHDVRGVGVAGGGTLGPNLTFTFARLGERGVRPALAKLDTPMMGALYAKAPLEEEEQYALKAFLADASRDGSKPRADRDFFYLGLVGALAVLGFMGVAFGAASKRGLS
>NZ_CP012109.1|WP_002634312.1|1608821_1609433_+|respiratory-nitrate-reductase-subunit-gamma
MSDTFFTVVPYVAAGVAVAGVARRWLSRAPASSPAPVAPWTSSGRAVVGGAAIVALNHALGLLAPRVMQAFNASPGRLFTLEAVSLIGGLLLTWGLAGLTLRRAREGQWGAAGLLGLLLLQALSGVFLAVSLRWGSAWYVHVVVPYLRSVFAFQPDATLLAQAPFIVQLHTLFGMVLLALAPFIRAQPIAAPLLVTPREETAG

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Crispr_ID: NZ_CP012109_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_7

1830938-1831032

Orphan

Consensus_repeat	Method
CCTCGGTGTTGGAGTCCCCGGGCACCAGCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_7

>merge|NZ_CP012109|7|1830938-1831032|CRISPRCasFinder
CCTCGGTGTTGGAGTCCCCGGGCACCAGCGGCGTCGGGCCCACGCAGCCCGCCACCGTGTCGTCCTCGGTGCTGGAGTCCCCGGGCACCAGCGGC

>NZ_CP012109|7|6|1830938-1831032|CRISPRCasFinder
CCTCGGTGTTGGAGTCCCCGGGCACCAGCGGC	GTCGGGCCCACGCAGCCCGCCACCGTGTCGT
CCTCGGTGCTGGAGTCCCCGGGCACCAGCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002634637.1\|1827681_1828335_+\|translation-elongation-factor-Ts	unknown	unknown	gnl\|CDD\|183447
NZ_CP012109.1\|WP_044889572.1\|1841420_1842506_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340838
NZ_CP012109.1\|WP_002634627.1\|1839132_1841373_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP012109.1\|WP_044889531.1\|1819195_1819993_+\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	unknown	unknown	gnl\|CDD\|223704
NZ_CP012109.1\|WP_002634642.1\|1820211_1821129_+\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
NZ_CP012109.1\|WP_021781064.1\|1832014_1832512_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|224973
NZ_CP012109.1\|WP_002634631.1\|1832701_1833367_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002634625.1\|1842514_1843117_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240289
NZ_CP012109.1\|WP_002634624.1\|1843113_1843614_-\|NADAR-family-protein	unknown	unknown	gnl\|CDD\|378035
NZ_CP012109.1\|WP_002634638.1\|1826549_1827524_+\|30S-ribosomal-protein-S2	unknown	unknown	gnl\|CDD\|235396
NZ_CP012109.1\|WP_044889529.1\|1831685_1832018_-\|iron-donor-protein-CyaY	unknown	unknown	gnl\|CDD\|274572
NZ_CP012109.1\|WP_044889574.1\|1821978_1823001_-\|23S-rRNA-(cytidine(2498)-2'-O)-methyltransferase-RlmM	unknown	unknown	gnl\|CDD\|236971
NZ_CP012109.1\|WP_002634636.1\|1828551_1829304_+\|UMP-kinase	unknown	unknown	gnl\|CDD\|234735
NZ_CP012109.1\|WP_002634628.1\|1838413_1839136_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP012109.1\|WP_002634629.1\|1837327_1838149_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133031
NZ_CP012109.1\|WP_002634635.1\|1829341_1829899_+\|ribosome-recycling-factor	unknown	unknown	gnl\|CDD\|178850
NZ_CP012109.1\|WP_002634639.1\|1823351_1826180_+\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NZ_CP012109.1\|WP_002634641.1\|1821228_1821936_-\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP012109.1\|WP_002634630.1\|1833389_1837169_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|235832
NZ_CP012109.1\|WP_002634644.1\|1817398_1819135_+\|DNA-repair-protein-RecN	unknown	unknown	gnl\|CDD\|223571

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002634637.1\|1827681_1828335_+\|translation-elongation-factor-Ts	gnl\|CDD\|183447	PRK12332, tsf, elongation factor Ts; Reviewed.	2.6452e-104
NZ_CP012109.1\|WP_044889572.1\|1841420_1842506_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340838	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.	1.20023e-96
NZ_CP012109.1\|WP_002634627.1\|1839132_1841373_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.60282e-32
NZ_CP012109.1\|WP_044889531.1\|1819195_1819993_+\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	3.03404e-78
NZ_CP012109.1\|WP_002634642.1\|1820211_1821129_+\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	8.96655e-47
NZ_CP012109.1\|WP_021781064.1\|1832014_1832512_-\|histidine-phosphatase-family-protein	gnl\|CDD\|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	6.09138e-21
NZ_CP012109.1\|WP_002634625.1\|1842514_1843117_+\|hypothetical-protein	gnl\|CDD\|240289	PTZ00144, PTZ00144, dihydrolipoamide succinyltransferase; Provisional.	0.000182334
NZ_CP012109.1\|WP_002634624.1\|1843113_1843614_-\|NADAR-family-protein	gnl\|CDD\|378035	pfam08719, DUF1768, Domain of unknown function (DUF1768). This is a domain of unknown function. It is alpha helical in structure. The GO annotation for this protein suggests it is involved in nematode larval development and has a positive regulation on growth rate.	2.48166e-78
NZ_CP012109.1\|WP_002634638.1\|1826549_1827524_+\|30S-ribosomal-protein-S2	gnl\|CDD\|235396	PRK05299, rpsB, 30S ribosomal protein S2; Provisional.	1.49153e-165
NZ_CP012109.1\|WP_044889529.1\|1831685_1832018_-\|iron-donor-protein-CyaY	gnl\|CDD\|274572	TIGR03421, FeS_CyaY, iron donor protein CyaY. Members of this protein family are the iron-sulfur cluster (FeS) metabolism protein CyaY, a homolog of eukaryotic frataxin. ISC is one of several bacterial systems for FeS assembly; we find by Partial Phylogenetic Profiling vs. the ISC system that CyaY most like work with the ISC system for FeS cluster biosynthesis. A study of of cyaY mutants in Salmonella enterica bears this out. Although the trusted cutoff is set low enough to include eukaryotic frataxin sequences, a narrower, exception-type model (TIGR03421) identifies identifies members of that specific set. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	4.41581e-33
NZ_CP012109.1\|WP_044889574.1\|1821978_1823001_-\|23S-rRNA-(cytidine(2498)-2'-O)-methyltransferase-RlmM	gnl\|CDD\|236971	PRK11760, PRK11760, putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase; Provisional.	6.3014e-49
NZ_CP012109.1\|WP_002634636.1\|1828551_1829304_+\|UMP-kinase	gnl\|CDD\|234735	PRK00358, pyrH, uridylate kinase; Provisional.	1.85819e-145
NZ_CP012109.1\|WP_002634628.1\|1838413_1839136_-\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	6.5789e-06
NZ_CP012109.1\|WP_002634629.1\|1837327_1838149_-\|glycosyltransferase	gnl\|CDD\|133031	cd04188, DPG_synthase, DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.	8.44574e-76
NZ_CP012109.1\|WP_002634635.1\|1829341_1829899_+\|ribosome-recycling-factor	gnl\|CDD\|178850	PRK00083, frr, ribosome recycling factor; Reviewed.	2.40981e-98
NZ_CP012109.1\|WP_002634639.1\|1823351_1826180_+\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NZ_CP012109.1\|WP_002634641.1\|1821228_1821936_-\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	0.000130983
NZ_CP012109.1\|WP_002634630.1\|1833389_1837169_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|235832	PRK06567, PRK06567, putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated.	2.44547e-173
NZ_CP012109.1\|WP_002634644.1\|1817398_1819135_+\|DNA-repair-protein-RecN	gnl\|CDD\|223571	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair].	0

>NZ_CP012109.1|WP_002634635.1|1829341_1829899_+|ribosome-recycling-factor
MSGDVVAELKGRIDKSLEGLRTDLTKVRTGRASTAILDGVRVDYYGTPTPLSGVASVNAPEPRLITIKPWEKSVLKEIEKALREANLGINPMNDGEMIRLPFPPLTEERRKDIAKQVKNKGEEFKVAIRNLRRDANEALKTQLKDKKITEDDHKRITETVQKQTDAGIAQVDDIVKKKEKEVMEV
>NZ_CP012109.1|WP_002634636.1|1828551_1829304_+|UMP-kinase
MSSDTTKPLPYKRVLLKLSGEALMGEGKYGIHPPTLMGIADEVIEVAQAGVEVALVIGGGNIFRGVAGATEGMDRASADYMGMLATCINCMAMQDALEKKGLHTRVLSAIKMEQIAEPYIRRRAVRHLEKGRVVIFAAGTGNPYFTTDTAASLRAMEINAQVILKATKVDGVYNADPKKDTTARRYRSLTYMDVLKQNLNVMDSTAISLCMDNKLPIIVFDLTLRGNIRRAVLADGDIGTLVGGSETVWA
>NZ_CP012109.1|WP_002634637.1|1827681_1828335_+|translation-elongation-factor-Ts
MAEVSAQMVKELRERTNAGMMDCKKALAESGGDFAKAEEWLRKKGIAKSAGKEGRVAAEGVVGTYVHGGRIGVIVEVNCETDFVARNPDFQELVKDVAMQIAAAGPKFVRREEVPTDNLDKEKDIQREILKQQGKPEAMLEKILVGKMEKYYEGVCLVDQLWVKDDKKKVGEMISERAAKIGEKVSVRRFVRYEVGEGIEKKKDDLAAEVAKTLGQA
>NZ_CP012109.1|WP_002634638.1|1826549_1827524_+|30S-ribosomal-protein-S2
METQDTQSQQQAMAAAGGITMRQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVVMARSAFRFVADITARGGSVLFVGTKKQAQDVIREEASRAGQFFVTSRWLGGTLTNFKTIKQGIDRLKGLEKMAEDGTFDRLPKKEVALLEREREKLEKNLGGVKEMSKLPRCVFVIDPKKEHIAIHEASRLGIPVIGLVDTNCDPDGIDFVIPGNDDAIRSIKLFTSKIAEACIEGAARYRASGAAERDEQEEREGRDDRGDRRDDRRGPRRGDRRDDRRDRGGDRGGERRGPLVEMKGAAAPVASEPAAEAAPEGEAAAE
>NZ_CP012109.1|WP_002634639.1|1823351_1826180_+|preprotein-translocase-subunit-SecA
MIEWTLKKLIGTKNERELKKAHSKVTRVNELETRMRALKDEDFVSETNRMRQEIQNGRSLDDLLFEAFALTREAARRVIGQRHYDVQLIGGMFLHEGCIAEMRTGEGKTLTATLPTYLNALSGRGVHVVTVNDYLARRDAEWMGRVYRFLGMTTGCVLHELNDKQRQESYRSDITYGQNNEFGFDYLRDNMKFRLQDYVQRELNFAIVDEVDSILIDEARTPLIISGPTEDSTDKYYRVDQVIPGLVPDQDYTLDEKHRSVSLTDDGIEKLQKRLGVGNLYDPGEIETLHHVDQALRAHTLYKRDKDYVVKDGEVVIVDEFTGRQMPGRRWSDGLHQAIEAKEGVKIENENQTLATVSFQNYFRMYSKLAGMTGTADTEAEEFAKIYNLDVRVIPTNRAPIRKDLQDVVYKTEREKFEAVAAEIEQLHKNGQPVLVGTVSIAKSEVVASFLKKRGIPHNVLNAKQHQREADIVAQAGRKGAVTISTNMAGRGTDILLGGNAEVLAKAAMGAPPEPPTTAPEGQPLDLTAYEQEMAAWEEKFKATKVRLEEETKKEREEVHNAGGLFIIGTERHESRRVDNQLRGRAGRQGDPGGSRFFLSLEDDLMRIFGSERIQGLMERLGMEEGEVIEHVWLSRAIEGAQKRVEGHNFDIRKNLLEYDDVMNQQRRTIYKLRRQVLASGAGIPLVEYEEDPKTRVKTRSERTLSWADFREMVLDATEDVIVSLTDTYAPTRGVEGWDIGALQQSVKETFNLEMNFEGVGNREELQEHIYKAAEKVFQAREEEFGENFMRFLQYNYLATIDRLWKDHLLAMDHLRQGIGLRGYGQKDPKQEYKKEGYQGFIQMLSAIKSQFVTQLMHVQPRSASSAAEEAARIQRQLAQQQKKAVEGRATADGKLDEGSVAAAARPAAATSNKPAVGRNDPCPCGSGRKYKKCHGATEASV
>NZ_CP012109.1|WP_044889574.1|1821978_1823001_-|23S-rRNA-(cytidine(2498)-2'-O)-methyltransferase-RlmM
MPASTLAARPGRWLWTCRAGFEAHLFEELAWAGAEPRLLGEALVESDAVAGQAPAFARVGHQVVATLTETAPEVVAEAAARAVLSASGRTPWVLQVFTPDTPRGNALAPFAESLEAAVAARLPAERRVEDAQRAREAGAVLFSLCVAPDGVTVVGAVTAREAVSLAPGGRRRMRRAGDAPSRAAMKLEEALDGLAFEPGRGDVCADLGAAPGGWTQRLVSRGAKVVAVDPARLMPELTGHARVKHVQESAFSYAPDEPVDWLFCDMAWRPLEVAQLLAKWGRRGWAQHLVANIKLPMKDKNPILLRVRHTLTQEGGWEGLTVRQLYHDRDEVTVTAHKLK
>NZ_CP012109.1|WP_002634641.1|1821228_1821936_-|diguanylate-cyclase
MPYALDDDTATALIALNPWVLSRSPQAPVQAAVEVLVQAEQARRGQPDAKTGAFQVPALTQGSLLKEEYDLSTHAHHDGWRVGAVIADVQGMINVNARFGFPTGDAVLRATVESLSAQYPGAKVVRIHADAFAALLVPTSQLTVSEHLAAPTRERLGQDVRRVLPPSTLDADVPAWTVSLLELTVDAPSHWQVLGTLLWAELERTHVMERTGRAQGLQRRRIRLDGAIPGPATLY
>NZ_CP012109.1|WP_002634642.1|1820211_1821129_+|M23-family-metallopeptidase
MAKKSFTLMVIPDHDAPVKRYTIQRSFFTQVGMGLMLVVGLGVGASIHYFQVAADASENRILREENLTLRSQLKSVRERIEHIGSTLDRVERFDQKLRAVTLLSDPQRNLAMGPTEPEAGTVAPATDTQFTQLTSTETPKALMGRLDRLSAEATRQEQSLQELQAYFQDQKSLLASTPSIWPARGWVTSDFGSRLDPYTADRVMHGGMDIAAPHGKEVFSPSDGTVVFAGLEGGYGNVLVIDHGYGIKTRYGHLSKMLVKAGDKVKRGMHIAAVGNTGRSTGPHLHYEVRVNGIGQNPRKFILEE
>NZ_CP012109.1|WP_044889531.1|1819195_1819993_+|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase
MSSTAGQTAASRLKIISAGLTDVGRKRNHNEDSFLIDDELQLYVVADGMGGHAGGGTASRIAVETIDKEMRRAREGKENPFLSVPNLQDSPIPEALRTAVERACLAIFTTAQEDARLSGMGTTVISLVVRDEHVFFAHVGDSRAYLIRGDLIQQISEDHSLVNEQIKAGMITPEEAKHSRYKNIITRSVGFEEEVQVDVMGLVSEPGDVFLLCSDGLANMMEDREIHEVVANTRTFDEVPQRLIDFANERGGDDNITVIVVRVEA
>NZ_CP012109.1|WP_002634644.1|1817398_1819135_+|DNA-repair-protein-RecN
MLLGLRISNVAVIEEVEVAFGAGLTVLTGETGAGKSILVDALGLLLGGRADADVIRAGCEEASVEGVFARTSALEARLEELGLPDLGEEVLVRRVLGRTGRGKAYVNGSLVTVGVLGKLTRGAVDIAGQHEHVSLFDSGLHRVLLDRYGNLETVLGAFFREYTGLREVDARMEALGGDEAKVRERAEFLRFQLDEIARLEPEAGEDARLDAERKRLGGAEKLKRHASEAELLVAGEEQSAVETVGRALGLVHDAVKCDATLEPVSQALSTALSELEEAQRRLNRYVEGLESDPSRLADVEERLDALKRLCRKHGTHLDGLLKKQGEIEVELGTLENRKEILEELAAERRKVEERARKAAAALTRARTASAVAFAAQVREGLGQLAMGKAAFEVRVTPSESLRPDGADDVEFFFSANPGEPPRALGKVASGGEASRLLLALKKALADSDGGGCYILDEADAGVSGAIADVVGRMIKDVSSHRQVLCITHLPQVAAYADAHLLIRKGLKGERTVSEVVVLEAGAERTRELARMMSGVEVTREALGAAEALVRSAHRALGSRARRESGPEGSPRGRLRRTA
>NZ_CP012109.1|WP_044889529.1|1831685_1832018_-|iron-donor-protein-CyaY
MMDEARYNQLTSAAFKRILAAADDLDPDTLEADSTGDMVTLTAASREKCIINTQRAVRQIWVAGRGQGIHFDYDAATGTWKDDKGRGLELMSFVAGVVRDISGVDLVYPG
>NZ_CP012109.1|WP_021781064.1|1832014_1832512_-|histidine-phosphatase-family-protein
MRLFLVRHGDADAEIPEGLGDEARALTAKARTGTAQHFGALAARMGPVGRILTSPLVRTVQTSQLLSIAAKFEGPLKVHRCLLPDMPVGAVEPVLNEFADENLVLVGHQPSMGALAAHLLGMQSFPKPVNPGTVIGLERVEGEATPAFKFLFYAAPGQQVLEVIQ
>NZ_CP012109.1|WP_002634631.1|1832701_1833367_+|hypothetical-protein
MRKVLWGLWVLMAFSGCKKAEEVSDPAAGAVGEQAPGVHDDAVVAGPYTVTKEKLDAYVGYQRRMLEVYGTLLKGLQNLGALVDAGTPEAMAAAREGLKVVEAKSKAEAEARKEAKLSEADVNGLAEVVTAVISQRQLGRTLQYEEELKKLEALQARLPPEQQQGMAEQVASMRAQVDAFQKLSDARRDYGDANVDIVLTREEDLIQNYQEMLRVFTGTRR
>NZ_CP012109.1|WP_002634630.1|1833389_1837169_-|FAD-dependent-oxidoreductase
MRALTDLLSEPAPVLTLGLPGFSFEDLYRPSRLRRLAERFDAQLAEEEPDLFQAFEAYRKSGGDSAHGAAESDLLIRVARHVSRFVTRLFRVEQELGRLSGNLKGELPLFDFKREFITRRVFRKGAPDRPTLAEYPSLDARMRLLLQLGFPEAIATGDLERGLAESVLSLMDLERLFSNALPAERKAEAEALRARWSALREVLLSSPEGKDAFGSSLVTQGDDASELQAVRALLSLADRWTYARALHPETKELFHAWPTHRIPKPLVFDQLVQLQRPDNDFPEATEGLAHHLRHRDGFKLTDRRGTSRDVMNEVDYCVLCHERQKDSCTKGFPAKDPVAEGHHYKKNPLGIPLNGCPLDERISEAHLLKREGNAVAALAMVTLDNPMCPGTGHRICNDCMKACIFQKQEPVNIPLAETATLTDVLELPWGFEIYGLLTRWNPLNVRRPYALPYVGRNVLVVGLGPAGYTLSHYLLNEGFGVTGVDGLKIEPFPDELVGRNGHVLQPIRDWSALTRELDERILEGFGGVSEYGITVRWDKNFLTLIHLTLARREGFRIFGGVRFGGTLTVEDAWELGFDHIAIAAGAGRPTIIGMKNNLIRGIRKASDFLMALQLSGAFKKDSLANLQVQLPALVIGGGLTGIDTATELMAYYPVQVEKALARHEKLVAQVGEEAVLARLDAEERVTYQTFLEHGRAVREERETAKAQGRAPDFIRLVRAWGGVSLVYRRGLTESPAYRLNHEEVTKALEEGIRFIERMSPVEALPDASGAVRALRFERMVTVDGKLKGSGQFFELPARTVCVAAGTSPNVTYEKEYPGTFQLDARGEYFQSHELVETDAGFSLAPVTAKEDPAAKTGFFTSYAKEGHFISFYGDNHPTYAGNVVKAMASAKDGHPQVARLYAKEVAALDFTDEVAQAAREAKRAEHFAKLDEAFTATVVAVNRLTPTIVEVVVRAPFAASHFLPGQFYRLQNFERNAPLVDGVRLTMEGLALTGAWVDKEKGLMGTIVLEMGSSSRLCAALKPGEPVVLMGPTGAPTEIGHNETVVLVGGGLGNAVLFSIARSLKAAGCRVVYFAGYRQKTDSFKHDEIEAGTDQIVWSVDTGDTIAPRRPQDSAFRGNVVQAMLAYAEGALGPAPVISLSEVDRIIAIGSDGMMRAVAEARHGVLQPHLKPGHEAIGSINSPMQCMMKEICAQCLQRHVDPVTGKETWVFSCYNQDQRLDQVDFVNLRQRLRGNTVMEKVADVYLAQLFKQAPHLKRI
>NZ_CP012109.1|WP_002634629.1|1837327_1838149_-|glycosyltransferase
MLAPSLSVTIPAYNEGQRLPRFVEELTRVFLERSAPPVEFVVVDDGSTAEHSELQRASVASAQARFTEANAPHQFTYVAAPRNQGKGSAIRLGWRHASAGVTWMAFLDADGAISAEEFLRLVELTTTPLAEKLDVLAGSRILMAGRRVVRNLHRHLQGRIFATLTDANFKLHFYDTQCGVKLVRADLLRPLLDVLQEQRWLLDVELLVLLKRQGARFLEVPIDWEDFGGSKVVPGLDAARMFWGLLQLRKRLERVSLPAPQGVLPSGSPHLHP
>NZ_CP012109.1|WP_002634628.1|1838413_1839136_-|hypothetical-protein
MKLLGRDIPARELIARIEERLRTRGLPTSEEVDVPPEGVEPRVEPLTFNLHALEENADATRALPLHTHRGGVGQAVLLAKWAFRKSCQVFINETLGRQRVFNGHVRDAYAQLSAEVIRLRREVETLRAQAASTSAGHAPLPKERPARREDAPATAPVPAERPAAPSTPVDDAVLPRPRENRPASAPAHQARPKKVSAPAGEVTPASAPRAKKGSAPSRPQPDGQPASARGGKKRRHKKGP
>NZ_CP012109.1|WP_002634627.1|1839132_1841373_-|glycosyltransferase-family-4-protein
MAIHQLIPSFVPGDATGQAALHLQLLLRRMGHAGALYADEVGPGLEGLAQPAARLRPEPDDLVLYHHGIASPLSSRLMHLPCRRGIVFHNISPARFYEGLPLSDALVAGRAQLAAMAPFADVAIGVSDFNAAELRVAGYRNVHTVPLFIEPERFSRASADAKMLEQLSGPGPVLLGVSRVMPHKRFEDLLALHREVLRLRPEARLLMVGGYEPGSRYFRMLKRQAQDLRGVSFLGRLNHAQLVAAYRSASLFVSMSEHEGFGVPLIEAMAAEVPVLAYAAAAVPETLGGAGVAFDQKRFAFLAELAVDLSEDLSLREPLIAGQTRRLEHFSASTAQAAFSKALETVLPRPAPRKAQAIPKRPRVALVVQRYGEVTGGAEKLAAQMAEHLAPHWDLTVLTTCAKNHLVWDNGFPPGPDEVNGIKVLRFPSTRVRNIRGFNGLSRQVFDKSIERLREEQWVAEQGPMCPGLLNHLATERDAYDGYLFFTYLYAPTVWGLPLVADRALVVPTTHDEAPVRFGIYRDVFERPRALLCLTPEEHTLIEKYFPQHAPTRVVGVGVDRPKADSTRFREKHGIHQHYLLYIGRQEPGKGVPELLEYHRALRERYADAPDLVLAGDTNMELSGEGVRYLGRIEEQDKHDALSGALAVVVPSRYESLSLLTLEAFAQSTPVLVNGRSDVLVGQVERSGAGRAYTDLESFIQGLREVGAERGPMGKRGLAYVKKQGWPQVVAAYREEMQRILEENRQ
>NZ_CP012109.1|WP_044889572.1|1841420_1842506_+|glycosyltransferase-family-4-protein
MGPIAYDATLWDEPTTGIGLYTRCLASALESLGVRLTRVGANVSGEAPRAKAGRTAWTLARLPRVLQSTGVPLYHAHGNFNLPLIRAPGMKYVLTVHDVIPLLMPETVSTAFRWQFRLWLSRSLLVADQVVCVSERTRQDLLALHPEVEPRTVVVPNGVDHVHAPELDATSRDFLRALALPKDYVLYAGSLDVRKNVDLVLDALERLRLRGRPVSLVLAGQSWFGAGRVESRISRLRSEGYEVRSLGYQSDAVFYELMRRAAVFVFPSRYEGFGLPPLEAMRLGTPTIVSNAGSLPEVCGDAALRVRPDDANGLARALERLLHSPDERRTLAEQGKAQAAKFTWKRTAEGTLAAYEAALRR
>NZ_CP012109.1|WP_002634625.1|1842514_1843117_+|hypothetical-protein
MRKRVWSGFVLCGLLVGCASRQDTGPAPMEAPSASAGDAQVSGEAPSSDAQAPVEAPPAEAKPVESASEEAPPTKDDTSPGALLPLVVTKSPEQKDSIGIYSMRVEGPVLTLGVSHGGGCAEHTYSLEWDGMLQQGVDGTPVANLVLVHDAHGDRCKAMLRARPRFDLSSVSKRFGAQFGKASGAVNLVIQDQAPVRYVF
>NZ_CP012109.1|WP_002634624.1|1843113_1843614_-|NADAR-family-protein
MSGAHSKRFTFFWRDQSPFSQWHRSAFEVDGARYVCAEQYMMAGKARLFGDTEVLAKILASESPKTHKALGRKVRHFDAAKWEQAREQIVYEGNRAKFTQNPALLEALLATAGTELVEASPMDRIWGVGLSEEDPRIQNPATWRGLNLLGKVLTKLREDLLAERAP

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Crispr_ID: NZ_CP012109_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_8

3709638-3709718

Orphan

Consensus_repeat	Method
CCCTGAGGACCCGCCGACGGGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_8

>merge|NZ_CP012109|8|3709638-3709718|CRISPRCasFinder
CCCTGAGGACCCGCCGACGGGCCGGAGGGCCGGTTCGGCGCACCCGGACCCTGGGGACCCTGAGGACCCGCCGACGGGCCG

>NZ_CP012109|8|7|3709638-3709718|CRISPRCasFinder
CCCTGAGGACCCGCCGACGGGCCG	GAGGGCCGGTTCGGCGCACCCGGACCCTGGGGA
CCCTGAGGACCCGCCGACGGGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002640738.1\|3710214_3711303_+\|leucine-rich-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|227223
NZ_CP012109.1\|WP_044889166.1\|3695971_3697336_-\|PQQ-dependent-sugar-dehydrogenase	unknown	unknown	gnl\|CDD\|369642
NZ_CP012109.1\|WP_144429540.1\|3698731_3699964_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002640735.1\|3712726_3714190_-\|glutamate-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|237213
NZ_CP012109.1\|WP_144429736.1\|3719709_3720510_+\|TonB-family-protein	unknown	unknown	gnl\|CDD\|367555
NZ_CP012109.1\|WP_002640746.1\|3700456_3702250_-\|DUF885-domain-containing-protein	unknown	unknown	gnl\|CDD\|377577
NZ_CP012109.1\|WP_002640732.1\|3718996_3719485_+\|8-oxo-dGTP-diphosphatase	unknown	unknown	gnl\|CDD\|239519
NZ_CP012109.1\|WP_082282743.1\|3706955_3707732_-\|carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|239398
NZ_CP012109.1\|WP_002640736.1\|3712200_3712617_-\|nucleoside-diphosphate-kinase-regulator	unknown	unknown	gnl\|CDD\|180236
NZ_CP012109.1\|WP_002640737.1\|3711368_3712130_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP012109.1\|WP_002640742.1\|3706020_3706695_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP012109.1\|WP_002640743.1\|3704869_3706024_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|273593
NZ_CP012109.1\|WP_044889168.1\|3702545_3703118_+\|DTW-domain-containing-protein	unknown	unknown	gnl\|CDD\|377168
NZ_CP012109.1\|WP_044889170.1\|3723961_3725431_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275359
NZ_CP012109.1\|WP_002640361.1\|3720582_3721926_+\|PepSY-domain-containing-protein	unknown	unknown	gnl\|CDD\|377164
NZ_CP012109.1\|WP_044889169.1\|3714193_3718765_-\|glutamate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|236968
NZ_CP012109.1\|WP_002640360.1\|3722021_3723737_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223587
NZ_CP012109.1\|WP_002640747.1\|3699969_3700434_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_158513088.1\|3703404_3704955_+\|glycosyltransferase-family-39-protein	unknown	unknown	gnl\|CDD\|379080
NZ_CP012109.1\|WP_044889167.1\|3697851_3698550_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|212030

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002640738.1\|3710214_3711303_+\|leucine-rich-repeat-domain-containing-protein	gnl\|CDD\|227223	COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown].	8.98831e-14
NZ_CP012109.1\|WP_044889166.1\|3695971_3697336_-\|PQQ-dependent-sugar-dehydrogenase	gnl\|CDD\|369642	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold.	8.07621e-175
NZ_CP012109.1\|WP_002640735.1\|3712726_3714190_-\|glutamate-synthase-subunit-beta	gnl\|CDD\|237213	PRK12810, gltD, glutamate synthase subunit beta; Reviewed.	0
NZ_CP012109.1\|WP_002640746.1\|3700456_3702250_-\|DUF885-domain-containing-protein	gnl\|CDD\|377577	pfam05960, DUF885, Bacterial protein of unknown function (DUF885). This family consists of several hypothetical bacterial proteins several of which are putative membrane proteins.	2.96461e-115
NZ_CP012109.1\|WP_002640732.1\|3718996_3719485_+\|8-oxo-dGTP-diphosphatase	gnl\|CDD\|239519	cd03427, MTH1, MutT homolog-1 (MTH1) is a member of the Nudix hydrolase superfamily. MTH1, the mammalian counterpart of MutT, hydrolyzes oxidized purine nucleoside triphosphates, such as 8-oxo-dGTP and 2-hydroxy-ATP, to monophosphates, thereby preventing the incorporation of such oxygen radicals during replication. This is an important step in the repair mechanism in genomic and mitochondrial DNA. Like other members of the Nudix family, it requires a divalent cation, such as Mg2+ or Mn2+, for activity, and contain the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as a metal binding and catalytic site. MTH1 is predominantly localized in the cytoplasm and mitochondria. Structurally, this enzyme adopts a similar fold to MutT despite low sequence similarity outside the conserved nudix motif. The most distinctive structural difference between MutT and MTH1 is the presence of a beta-hairpin, which is absent in MutT. This results in a much deeper and narrower substrate binding pocket. Mechanistically, MTH1 contains dual specificity for nucleotides that contain 2-OH-adenine bases and those that contain 8-oxo-guanine bases.	1.43689e-50
NZ_CP012109.1\|WP_044889167.1\|3697851_3698550_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|212030	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.	6.86018e-13
NZ_CP012109.1\|WP_002640736.1\|3712200_3712617_-\|nucleoside-diphosphate-kinase-regulator	gnl\|CDD\|180236	PRK05753, PRK05753, nucleoside diphosphate kinase regulator; Provisional.	2.37773e-56
NZ_CP012109.1\|WP_002640737.1\|3711368_3712130_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	2.54686e-41
NZ_CP012109.1\|WP_002640742.1\|3706020_3706695_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.23094e-85
NZ_CP012109.1\|WP_002640743.1\|3704869_3706024_-\|HAMP-domain-containing-protein	gnl\|CDD\|273593	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase. Members of this family contain a sensor histidine kinase domain (pfam00512) and a domain found in bacterial signal proteins (pfam00672). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc.	1.66032e-53
NZ_CP012109.1\|WP_044889168.1\|3702545_3703118_+\|DTW-domain-containing-protein	gnl\|CDD\|377168	pfam03942, DTW, DTW domain. This presumed domain is found in bacterial and eukaryotic proteins. Its function is unknown. The domain contains multiple conserved motifs including a DTXW motif that this domain has been named after.	2.76168e-38
NZ_CP012109.1\|WP_044889170.1\|3723961_3725431_+\|hypothetical-protein	gnl\|CDD\|275359	TIGR04566, hypothetical_protein_Q664_47920, outer membrane exchange protein TraA, N-terminal region. In Myxococcus xanthus, the protein pair TraA (MXAN_6895) and TraB (MXAN_6898) are required for contact-dependent exchange of outer membrane proteins. The C-terminal half of TrA consists largely of Cys-rich tandem repeats. This model describes the N-terminal region of TraA, and related protein MXAN_4924. This region is suggested to be similar to the lectin PA14. Members of this family are restricted to a subset of the Myxococcales, and so have a narrower species distribution than the MYXO-CTERM putative protein sorting signal (TIGR03901), which is universal in the Myxococcales. Note that TIGR04201 matches at least seven repeats in the C-terminal region of TraA. T [Protein fate, Protein and peptide secretion and trafficking].	1.64975e-149
NZ_CP012109.1\|WP_002640361.1\|3720582_3721926_+\|PepSY-domain-containing-protein	gnl\|CDD\|377164	pfam03929, PepSY_TM, PepSY-associated TM region. The PepSY_TM family is so named because it is an alignment of up to five transmembranes helices found in bacterial species some of which carry a nested PepSY domain, pfam03413.	6.2259e-51
NZ_CP012109.1\|WP_044889169.1\|3714193_3718765_-\|glutamate-synthase-large-subunit	gnl\|CDD\|236968	PRK11750, gltB, glutamate synthase subunit alpha; Provisional.	0
NZ_CP012109.1\|WP_002640360.1\|3722021_3723737_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	2.564e-158
NZ_CP012109.1\|WP_144429736.1\|3719709_3720510_+\|TonB-family-protein	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	1.60257e-16
NZ_CP012109.1\|WP_158513088.1\|3703404_3704955_+\|glycosyltransferase-family-39-protein	gnl\|CDD\|379080	pfam13231, PMT_2, Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.	5.00563e-26
NZ_CP012109.1\|WP_082282743.1\|3706955_3707732_-\|carbonic-anhydrase-family-protein	gnl\|CDD\|239398	cd03124, alpha_CA_prokaryotic_like, Carbonic anhydrase alpha, prokaryotic-like subfamily. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. Most alpha CAs are monomeric enzymes. The zinc ion is complexed by three histidines. This sub-family includes bacterial carbonic anhydrase alpha, as well as plant enzymes such as tobacco nectarin III and yam dioscorin and, carbonic anhydrases from molluscs, such as nacrein, which are part of the organic matrix layer in shells. Other members of this family may be involved in maintaining pH balance, in facilitating transport of carbon dioxide or carbonic acid, or in sensing carbon dioxide levels in the environment. Dioscorin is the major storage protein of yam tubers and may play a role as an antioxidant. Tobacco Nectarin may play a role in the maintenace of pH and oxidative balance in nectar. Mollusc nacrein may participate in calcium carbonate crystal formation of the nacreous layer. This subfamily also includes three alpha carbonic anhydrases from Chlamydomonas reinhardtii (CAH 1-3). CAHs1-2 are localized in the periplasmic space. CAH1 faciliates the movement of carbon dioxide across the plasma membrane when the medium is alkaline. CAH3 is localized to the thylakoid lumen and provides CO2 to Rubisco.	4.01311e-79

>NZ_CP012109.1|WP_082282743.1|3706955_3707732_-|carbonic-anhydrase-family-protein
MGLGILALAIVFPASVSAQTGVRAKSASPGPSWGYIDSVGPSHWGELPGADACSMGQHETPIPLVSALAEPQNGPAPSFYYRTSRVKMRHTGHTVEFAYDTGSEVRVGTKHYMLKSFHFHTPSEHVVDGMRHPMELHIVHESPDGEHLVVGVFMKVGMTNAALFQAFQNLPWTVNDEHAPRGALINVSNLLPRKTSYFQYRGSLTTPPCTEGVEWYVMRHPVELADAQIAAFQRLPYINPNNRPLQPINGRVIYLRDP
>NZ_CP012109.1|WP_002640742.1|3706020_3706695_-|response-regulator-transcription-factor
MSILIVEDESRVRAFIARGLQEEGFRVRESADGLQAQELLHTERFDLIVLDWMLPGLPGLELLRAMRAQGDNTPVLMLTAKDAVTDRILVLNAGADDYLVKPFSFEEMLARIRAILRRVVQRAGPLLSHADLTLDPSTRRVTRAGETIILTVREFALLQFLLEHAGEVVSRTRIVQAVWEHDFETFSNVVEVYIRYLRTKVDAPFKLKLIHTVRGVGYVLRSQK
>NZ_CP012109.1|WP_002640743.1|3704869_3706024_-|HAMP-domain-containing-protein
MRRPLTLRAHLTLFFASAVLGTLLLYGGAVTAILVWGEWRERLERHSAPAEATKQADEEGLFDEALQALGAMALTAPLAALGAAVLGSALARRAMAPLRDASERARAARASKLDLSLPVRGNGDEWDQLASTLNELLADARASFERIRAFTSDAAHEFRTPLTVILGETEVSLRRERTPEEYRRSLEIVFEETQRLARLVDELLQLARSDAGARVMNTEPLDLYALAREALEQTRRHVAAQARSLTLELVGATTPIHGNPILLTRLLENLLDNARRHARSHIRVEIITTGSEVLTTVSDDGVGVDAAFLPRLFERFARADVSRSTEGTGLGLALSRTIAEAHGGALAYQRRGEESHFTFRLPLSSGPAGEPVRSLPAIPGKTTT
>NZ_CP012109.1|WP_158513088.1|3703404_3704955_+|glycosyltransferase-family-39-protein
MARASVEISRVAGWRWVLWSSLGLVLLRLVYARQVELAPQEAYYWQYARHLDWSYLDHPPMCAWLMALSSFLLGDSEMALRLPAILSSAALSCILYSLGTRLYSPAVGLLTAIAANTTVLFGLGAVVMTPDVPLVLAWASVLRVLCELVLPDGRGPGRFGWRWSLVGLLCGLGLLSKYTAALLPMQVLLTALVTRRGREALCTAHPYVGFALTVLVFSPVFFWNHAHGWASFAFQTMGRAQTMDGFHGYLVGRYVGLQSVAVGPLLYLALLLTAGLLARQAWRGDARTRLLALASVPGVLLFTLVSPFHWVKMNWVAPAYLGLLVAAAGGAWKLRHQHLLRAYAGLSTGMGAVLMVAMYLMPLCSWIPFRERDNLVSGWRELATAVQRHLDSSGKPAPLVVGWGYKTASELAYYLEGRPETQSDSALGGDGLAYSYWLEQVPPARDAIIVADMRQPLRDAGSRLDMHCASVRELPPVTVHRGARVVTTFRLWSCQGWRAKSELARRQAHSTRADER
>NZ_CP012109.1|WP_044889168.1|3702545_3703118_+|DTW-domain-containing-protein
MSSRLASRPRCLRCNLSLHLCLCDAIPQVRTRTRILLLQHVMEIAKKSNTGRVAALALTNSKLIIHGSPSGDFDLELLSEPGTWLLYPDGPKAPPDAPPPRQLVVLDASWSQARRMTQRVPELRTLPRLALPAPEPGLLRLRETSHPSGMSTLDAVARAVAALEGPDVAEPLEQLAALRVQRIAACGTLF
>NZ_CP012109.1|WP_002640746.1|3700456_3702250_-|DUF885-domain-containing-protein
MIVLRSTSVLAAWLLLSPGCTASRPPPPSEPRDIPSARAMAPAQVALRAFVDAHLEEHFRRSPLAATSAGVHTYDGELRNFRPEERAEHLAYLKDRLAALPKAVDRAALPPLDKADYDILENHLRSRILELEVVRTWERNPNAYLGFASSAVFQLINRDYAPLEERMGSAVKRMGVVPEVFAAAQANLQNPPRLWTEIALEQVRGTRALYAQTLPQAFAKVKDAALQEAFKKEQARGLEAIDTYARFLKEDLLPRSKGEFAIGEETYRKKLQYDEGVTESIDSLLAWGRAEMKRSQEQFHEVAARLAPGKAPMDVYRELGKDHPAPAELVATTTATLEEIRQFLIDQRIITVPSEVRAQVAETPSFNRALSFASMSTPGPFETKATEAYYYVTPPDSAWNADQTTQHMSFYNRYALPLVSIHEAYPGHYVQFLWTNRVESKVRKLMGSGSFSEGWGLYTEQMMLDEGYGGTGVQADRLRLNQLALYLQRLARYVAGLSLHTRGMTYEQAVRLFEEEAYMTRINAEREARRGTSDPTYLVYALGKKLLMELREDAKAQWGKDFTLQRFHDQVVSYGYPPVPIVRRLMLGEDGVSSASP
>NZ_CP012109.1|WP_002640747.1|3699969_3700434_-|hypothetical-protein
MSALPRGLIIVCTIAAAACGGIRKDLGEDAYLRQQLYDYGYDIALDTLWETAKQMAESTRDESRSEDGVRTAVVAIRRASIGDETTLEVLLMRGWEEGGRSYVKFFKAEHGASFQPHDISAREVNTELDLLGRIVPADAAKVRQGASRAGQRAR
>NZ_CP012109.1|WP_144429540.1|3698731_3699964_+|hypothetical-protein
MLVAVLSGCRASYVRQTAQMRVLADVGQYDAALTELDSVAAREELDPLLVAVDRGGLLHRAGAWDASSRVWVRAAELADDHERVRLSEEFTGNIPWRMGSLERQTLHTLNALNYLQLGRPEDAAVEARLTNALTLQRHLEERHQIQMERHLHAIHFDEELRPYLVQSAIGLYVSGLAHELAGNEASAFIDYLAAWSITRSAPPGAPSRLTHLEPWLLSEARRLGRPELEALERAIPVPAASAREGESGALVVVVEAGKLPERCVIEDAKEARVWNVCPRPWRRGQARVETASGSWDTETVTSLENILLRRGSLGVSVDTTRKPNLWARAGALSLFVLMPPLGGYLLARSAVEHGTQMEQGWLSLPAEFQVARLSLPPGRHTVRVRRSGQEETREVDIVSGHPRVLVVPMH
>NZ_CP012109.1|WP_044889167.1|3697851_3698550_+|LysM-peptidoglycan-binding-domain-containing-protein
MSTSIRSNRSNGSSYKIQRGDTLSALAVRFKTSVKELARINNIANPDLIYAGANLRLPGSSGKAGGYSGKDSFDSGSSGGGARRSGGASGGGNVRSTGGVAPNGATPAMQRLADAGRRAAMSMGGYNSQGLCATGVSRAIQNAFGFKVWGNGNQIDDNLPRDKFKQVNMSLEEALKIPGLVLTWEKTSSRLGSIYGHTAITTGDGRSSASDFIEQNTTNNGRSGFKVFMPII
>NZ_CP012109.1|WP_044889166.1|3695971_3697336_-|PQQ-dependent-sugar-dehydrogenase
MRILSIPLIVATLLVGCSEDPRPKPPDSGVPQGDSGVDSGVPPEDSGVPDDDAGVPDDDAGVPDDDAGTPEEPLPTGPPVPQGPANVPEFDPAFPGQTRVPAIQSRTEITVTEIASGFRNPWAIAFLPDQRMLVTEKPTGSLYIVTPEGAKSPAVTGLPAVDGRGQGGLLDVEVGPDYAESGLIYWTYAEPRTGGNGLAVARARLVDGAQPRVENVQVIFQMMPTLESTLHSGGRLVFTPDGKLFVTLGERSILAGRVQAQDVRSHFGKVVRINPDGSVPDDNPYLNTPDAKPEIWSIGHRNILSAALDSQNRLWTVEMGPQGGDELNRPEAGKDYGWPTIGYGEEYSGAPIHESPRREGMEQPVYYWDPVISPSGMTIYTGNLFPEWRNNVFIGGLSARALVRLRMHNDRAVGEEHLLKDRNERIREVVQGPDGALYLLTDATNGKLLKVTPR
>NZ_CP012109.1|WP_002640738.1|3710214_3711303_+|leucine-rich-repeat-domain-containing-protein
MSKKTVSLATLWKRVEKKAVQVLGKGAAGKYPEALEPRVMPFSTGFDPAPLLPAEYVELVQALGYRWLTGTSSTLALLPPRWQVGLSQQTGVPDRQWDEVRTEREAGTHVHAFVMFAAHDIEDINGFAFGKSADSDALAVWNVEDSLPVEELGPFSTWLAEALEAMSESLDEAEEGATSEEPPDLAGASLPIKAKAKASAASKSPAALFDTFPRDSKELLFNGRKLGALPAVIGEFTELESLWMRTTGIQQVPPEVGRLSKLKKLDLSFNPELTELPAEIGDLESLESINLNRTGLKTLPDSLERLRRLTFVDLQSTPLTALPPVLFRMPWLRTLDLYWTTLPPEEIERFRRAVPGCKVGVN
>NZ_CP012109.1|WP_002640737.1|3711368_3712130_+|ParA-family-protein
MAFIAFSTIKGGVGKTTLCSHVAAALADAGRQVLLLDLDPQAHASLVLGLESREGPCVGDALGPRPKHTLAQVVVASPKRPGLFIAPAAPRMATQERELFQWGHRLQAIPRALKTLGWTPDVILADTPPSIGAYTEAVLASADLVVAPVPTGAFALQGLGEIETAWREVREQGGELVAVVNLWDRRTTATNEAMEGALSESSVPVLRSRIPRSESINQAGLGYEVVFDTSPQAAGVEELRALAHELGKRVGLR
>NZ_CP012109.1|WP_002640736.1|3712200_3712617_-|nucleoside-diphosphate-kinase-regulator
MTSEQPLIVTETDLERLRQVVDHNGGGRTAEFAEMLDAELTRARVVASAAVPPDVVTMNSKVVFEDEQSGERREVTLVYPRDASSDNGRISVLAPIGSALIGLSVGQSITWPLPGGRSKRLRIVAVPYQPEAAGHYHL
>NZ_CP012109.1|WP_002640735.1|3712726_3714190_-|glutamate-synthase-subunit-beta
MGKPTGFIEWERVHADKRDTTERLNDWREFALPLSADEAKRQAGRCMDCGVPFCHQGCPLGNLIPDFNEAVYRGRWREAYDLLSRTNGFPEMTGRLCPAPCEAACVLAIDRDPVTIEQMEKEISERAFAEGWVKARPPARRTGKTVGVVGSGPAGLAAAAQLNAAGHTVTVYERDARAGGLLRYGIPDFKLEKSVVDRRLALMEAEGITFVTGVDVGGAVSYREMRAKHDALVLALGARRPRELEVPGRELTGVIQAMTYLEHQNRLVSAHGEKDPALDAAGRHVVVLGGGDTGSDCLGTALRQGAKSVRQVELLPAPPAVRAEGNPWPRWPLIFRTSTSQEEGGERRFALMTKRLTGTEDGRLQALHAVEVELQPTAGALPRIIERPSSDVTFEVDMLVLAMGFTGPETGPLSEELGVKLSPRGTVQVDARFATSAEGVFCAGDASRGASLIVWALSDGREAAKACDAYLSGGRSVLPTRGADCAF
>NZ_CP012109.1|WP_044889169.1|3714193_3718765_-|glutamate-synthase-large-subunit
MSKSAFRPGRYGLYEPDTEHDACGVGFVAHLRGERSRGIVEDALELLNRLSHRAAAGRDPKTGDGAGILVQLPHRFFERESPNFSFALPPRRHYGVGQVFLPPEPEARAACEAAFEEVVVQEGQRVLGWRDVPVHPEHLGPVAREAAPVIRQIFVARRRVVPSAFERKLYRIRKLTENLIQARGADPSGRFHVASLSSETLVYKGLMLPADLPRFYSDLQQPDFVSALGLVHSRFSTNTFPTWELAQPFRFIAHNGEINTMRGNRNWMTARRGLLQTARLGGSLDALQPIIVPGKSDSAQFDNMVELLYLGGRPLPHALMMMIPEAWEGDTLMSDERRAFYEYSSALLEPWDGPAAIAFTDGQLIGATLDRNGLRPARYLVTEDDRIILASEMGVIDVPPSQVRRKGRLTPGRMLLVDTTEGRILEDEDVKRDITTRWPYRRWLQRNVYTFDNLPAVTAPVRLRGEELWRAQRAFGYTAEDVRSVLTPMAETGKEPVGSMGTDTPLAVLSDQAPSLFSYFHQLFAQVTNPPIDPLRESLVMTLATALGPESNTFEETPEQCHRLSLPGPILTNGQLARLAAINDEGMFETRRLSLLYPLDGGDGALEAAVEKLCSEAVEAVDAGASILLLSDRGVDAANAAIPALLAMSAVHQRLVRDGIRMYAGLLLETAEAREVHHFACLFAYGAAAVNPYLALDTLRALADGGELAVDAEKAQERFIKAVEEGLLKVMSKMGISTLQSYRGAQLFEAVGLQRSLVERHFTGTASRVEGVGLPELGREVKERHTRGFGAEADAEAGMLPVGGQYRWRRLGERHKWNPATIAKLQAAVRSNDAATFAEYSRLADDETRDHCNLRGLLEVVHEGRTPVPLDEVEPALSIARRFVTGAMSFGSISAEAHETLAIAMNRLGGRSNSGEGGEESRRFTPDENGDLRRSAIKQVASARFGVTTEYLVNADELQIKVAQGAKPGEGGQLPGHKVDERIARVRWSTPGVTLISPPPHHDIYSIEDLAQLIYDLQSVNPSARVSVKLVSEVGVGTIAAGVAKAGASCVVISGYEGGTGASPLSSIQHAGLPWELGLAETQQVLVHNGLRSRIRVQADGGMRTARDVLVAALLGAEEFGMATASLVAVGCIMLRKCHLNTCSAGIATQDAGLRERFQGKPEDVVNFFLLIAEDLRQRMAALGARTLEELVGRVDLLKQRPAVDHWKAKRVDLSSLLTAPAAPDSEPRHCIEPRIKDVSDHLDHQLLRDAGAVLDGGQPMLLNVPVANVHRAVGALLSGEIARRHGGQGLPDGRLHVRMKGSAGQSFGAFVVKGVTLELEGDANDYVGKGLSGGRIIVYPPQASRFTPEENVLVGNTALYGATAGEVYLRGLAGERFAVRNSGAQAVVEGVGDHGCEYMTGGAVVVLGPTGRNFAAGMSGGIAYVLDREQSFRQRCNLEMVELESLVDESEIWLVHGMVERHLHHTGSALARRVLDNWELMVPRFVKVMPTDYKRVLQARRAARRPPESTSAAPAQSAAGRA
>NZ_CP012109.1|WP_002640732.1|3718996_3719485_+|8-oxo-dGTP-diphosphatase
MPYTPIIGTLGYVMSPDGQRVLLIHRNARPDDAHFGKWNGLGGKMDRDEDVAACMRREIREEAGIECTQMVLRGTLSWPGFGKHGEDWLGFVFRIDRFEGTPLESNPEGSLSWVPVADISKLNLWDGDRHFLPLVFDADPRPFHGVMPYAGGKALRWSYSRF
>NZ_CP012109.1|WP_144429736.1|3719709_3720510_+|TonB-family-protein
MGESSATEGFFRRWSGASAVAVVLHAGVLVAAMSVSSEAPKRVVVEEPELVLLALAAPPPPPPAGGGALRQAPAKADVPRQARPRPTPRVVPAPVTRPEPEPVAEVKPETPPEPVVEPVSEPEPEVAQAPADTAAASAMGGVVGGVVGGVVGGTKGGIVGSMAVGGTGDALSLKQVMRPPTVVSAVTPEYPRLAKQRNIEGVVVVRVIVGTDGRVEPEHTKVMRSVPALDAAAIAAVNQWRFTPALGRSGRLARVIIDVPVNFSLK
>NZ_CP012109.1|WP_002640361.1|3720582_3721926_+|PepSY-domain-containing-protein
MRTFRNILFWIHLITGIAAGIVIGIMSFTGVVIAFEKQIIEWAERDIRTVQVPSPGAARLPVEDLVERVRAVRTDGQPTAVTVFPDPASSVIVNIGRGSVTFIHPYTGEVLGNGAEGVRGFFRWNVELHRWLVASGDNRPVGKAITGASNAVFLFLAISGLYLWWPRKWTLRAMRPSLWFRRGLKGKARDWNWHNVIGFWTLPVIIVLAGSGMVISYKWASNLVFTVMGSPAPTTQGPPGSGSVKVPAPTEPTPRKPLDELMAEARKTSPNWEYVVLRLGGGNARPAGAQAPGGKGQGGREGAPEAQVKAEGAPADVVPDAQGKRGRGKGDADGVDAVSFSVREKDAWPLFSSQQVSLNPFTGEVAKLEGYADYNSGRKARSWLRFLHTGEALGLIGQLVAAIASLGGVFLTYTGFALAWRRFFPRRRRATTEAKAEPVTAESERAA
>NZ_CP012109.1|WP_002640360.1|3722021_3723737_-|DEAD/DEAH-box-helicase
MKAPPTPAPSDATFESLGLKPALVEALSALGYEEPTPIQAAALPPLLGGKDLLGIAATGTGKTAAFALPLLNHVTPGACKPHTTSALVLVPTRELAMQVSEAIHRYGQKLGVSVLPLYGGQVIGQQLRVLKRGVDVVVATPGRALDHLRRGTLQLDDVRMVVLDEADEMLDMGFADDLEAILSGTPEDRQTALFSATLPPRIASIAERHLHEPVRVKIAREKVEQGEMPRVRQTAYVVPRAFKIATLGRLLDVESPTAAIIFCRTRTEVDDLTVSLNGRGWRAHALHGGMTQEQRDRVIKQLKSQGTDLLVATDVAARGLDIPRLSHVVNFDVPNAPEAYVHRIGRTGRAGREGVAITLVEPREHRLLRNIERVTGQRIEVATVPTVADMREKRQELLRESLRETLVAGEFDSLRSVVEGLASEFDPMDIAAAAVKLLHDAQDEGRDAEETEIPVVAPPQERKDRPGGKFGGPSGRSGPSERGPKSRGAPPTWDVTRLWIGAGRHAGMRPADLVGAIAGEAGVESSKIGAIQIGDTFSLVEVPESDANRIIAALKNATLRGKKVLVRKDRN
>NZ_CP012109.1|WP_044889170.1|3723961_3725431_+|hypothetical-protein
MRPLCMFLLLVWGLLIPLAAGAQVVVISGRPVAPLPGTPGVGLCSAARVSRSPAADFPQSQWAYIPGINAFLDADPGSRIDSVVQTPLDLSNNLNDGRTLSYGDFQGAVAGCPAGGCGFIYNDDLTSFATRLRGYLAVTSDMAGRSLQFGFYADESVSLTIIDGNQAHHPLINRPPTIGFPTWRAAKTVRFEQPGLYGVEVLYTNIGQHAALELSLRDGDGDLADFERQATTPPIIRLDAAGFVLMTPELFHQTESGWPSFPVSTECAQCNRQSANAPGNGGCEAGFRCNAAALCARCDSLNACGESCSPCGASAPYCVSQAEGFACAECRGDNDCWVTEECRVPTCSETGRCASNLAEDGTACRGGTCQQGECMRVDAGTPDAGEVDGGAHPDEDGGSANEDGGTSDDDGGSADEDGGSSAEEDGGSANADGGSTVDSGVPGGDAGAVDGGAEAPPASEAGCGCQGGPSALFPTSLLVLARVVRRGRR

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Crispr_ID: NZ_CP012109_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_9

4260443-4260547

Orphan

Consensus_repeat	Method
CGCCTCGGCCTCCTTCACGCGGAC	CRISPRCasFinder

1 spacers

2OG_CAS

The CRISPR arrays of NZ_CP012109_9

>merge|NZ_CP012109|9|4260443-4260547|CRISPRCasFinder
CGCCGCGCCCTGCTTCTCGATGGCGCCCGCCTCGGCCTCCTTCACGCGGACGTTGACCATGCCGAGCTTCTCCTGCGCCTGCGCGTCGGCCTCCTTCACGCGGAC

>NZ_CP012109|9|8|4260443-4260547|CRISPRCasFinder
CGCCGCGCCCTGCTTCTCGATGGC	GCCCGCCTCGGCCTCCTTCACGCGGACGTTGACCATGCCGAGCTTCTCCTGCGCCTG
CGCGTCGGCCTCCTTCACGCGGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002639638.1\|4264135_4265113_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|366359
NZ_CP012109.1\|WP_002639651.1\|4244960_4245455_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002639640.1\|4262027_4262789_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002639635.1\|4266414_4268091_-\|amidase	unknown	unknown	gnl\|CDD\|236161
NZ_CP012109.1\|WP_044890425.1\|4265282_4266008_+\|2OG-Fe(II)-oxygenase	2OG_CAS	-	gnl\|CDD\|379309
NZ_CP012109.1\|WP_002639636.1\|4266035_4266413_+\|DUF1330-domain-containing-protein	unknown	unknown	gnl\|CDD\|377765
NZ_CP012109.1\|WP_002639645.1\|4250852_4251341_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|372667
NZ_CP012109.1\|WP_002639642.1\|4254049_4259608_-\|DNA-repair-ATPase	unknown	unknown	gnl\|CDD\|378861
NZ_CP012109.1\|WP_002639644.1\|4251486_4253283_+\|von-Willebrand-factor-type-A-domain-containing-protein	unknown	unknown	gnl\|CDD\|238742
NZ_CP012109.1\|WP_002639653.1\|4242821_4243388_+\|DUF3105-domain-containing-protein	unknown	unknown	gnl\|CDD\|378632
NZ_CP012109.1\|WP_044890422.1\|4248246_4249698_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277344
NZ_CP012109.1\|WP_002639634.1\|4268166_4269225_+\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|366777
NZ_CP012109.1\|WP_002639643.1\|4253340_4254036_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226755
NZ_CP012109.1\|WP_044890426.1\|4269392_4274762_-\|myxosortase-dependent-M36-family-metallopeptidase	unknown	unknown	gnl\|CDD\|341059
NZ_CP012109.1\|WP_002639632.1\|4275365_4276310_-\|aromatic-alcohol-reductase	unknown	unknown	gnl\|CDD\|187569
NZ_CP012109.1\|WP_044890480.1\|4276949_4278881_-\|S1-RNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|237516
NZ_CP012109.1\|WP_002639646.1\|4249718_4250840_+\|DUF1624-domain-containing-protein	unknown	unknown	gnl\|CDD\|377915
NZ_CP012109.1\|WP_044890421.1\|4245633_4247040_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377885
NZ_CP012109.1\|WP_021781381.1\|4262966_4264106_+\|DNA-topoisomerase-IB	unknown	unknown	gnl\|CDD\|226099
NZ_CP012109.1\|WP_002639652.1\|4243398_4244949_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002639638.1\|4264135_4265113_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|366359	pfam00891, Methyltransf_2, O-methyltransferase. This family includes a range of O-methyltransferases. These enzymes utilize S-adenosyl methionine.	1.18815e-50
NZ_CP012109.1\|WP_002639636.1\|4266035_4266413_+\|DUF1330-domain-containing-protein	gnl\|CDD\|377765	pfam07045, DUF1330, Domain of unknown function (DUF1330). This family consists of several hypothetical bacterial proteins of around 90 residues in length. The function of this family is unknown.	9.05063e-06
NZ_CP012109.1\|WP_002639635.1\|4266414_4268091_-\|amidase	gnl\|CDD\|236161	PRK08137, PRK08137, amidase; Provisional.	0
NZ_CP012109.1\|WP_044890425.1\|4265282_4266008_+\|2OG-Fe(II)-oxygenase	gnl\|CDD\|379309	pfam13640, 2OG-FeII_Oxy_3, 2OG-Fe(II) oxygenase superfamily. This family contains members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily.	0.000113828
NZ_CP012109.1\|WP_002639645.1\|4250852_4251341_-\|VOC-family-protein	gnl\|CDD\|372667	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	3.44857e-37
NZ_CP012109.1\|WP_002639642.1\|4254049_4259608_-\|DNA-repair-ATPase	gnl\|CDD\|378861	pfam12458, DUF3686, ATPase involved in DNA repair. This domain family is found in bacteria, and is approximately 450 amino acids in length. There are two conserved sequence motifs: DVF and SPNGED.	0
NZ_CP012109.1\|WP_002639644.1\|4251486_4253283_+\|von-Willebrand-factor-type-A-domain-containing-protein	gnl\|CDD\|238742	cd01465, vWA_subgroup, VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the VWA domain in these proteins. The members do have a conserved MIDAS motif. The biochemical function however is not known.	1.52661e-58
NZ_CP012109.1\|WP_002639653.1\|4242821_4243388_+\|DUF3105-domain-containing-protein	gnl\|CDD\|378632	pfam11303, DUF3105, Protein of unknown function (DUF3105). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	1.59619e-33
NZ_CP012109.1\|WP_044890422.1\|4248246_4249698_+\|metallophosphoesterase	gnl\|CDD\|277344	cd07399, MPP_YvnB, Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	2.07441e-20
NZ_CP012109.1\|WP_002639634.1\|4268166_4269225_+\|patatin-like-phospholipase-family-protein	gnl\|CDD\|366777	pfam01734, Patatin, Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.	0.000991472
NZ_CP012109.1\|WP_002639643.1\|4253340_4254036_+\|hypothetical-protein	gnl\|CDD\|226755	COG4305, COG4305, Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism].	5.58164e-42
NZ_CP012109.1\|WP_002639632.1\|4275365_4276310_-\|aromatic-alcohol-reductase	gnl\|CDD\|187569	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs. PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	5.61621e-70
NZ_CP012109.1\|WP_044890480.1\|4276949_4278881_-\|S1-RNA-binding-domain-containing-protein	gnl\|CDD\|237516	PRK13806, rpsA, 30S ribosomal protein S1; Provisional.	1.53714e-113
NZ_CP012109.1\|WP_044890426.1\|4269392_4274762_-\|myxosortase-dependent-M36-family-metallopeptidase	gnl\|CDD\|341059	cd09596, M36, Peptidase M36 family, also known as fungalysin family. The M36 peptidase family, also known as fungalysin (elastinolytic metalloproteinase) family, includes endopeptidases from pathogenic fungi. Fungalysin can hydrolyze extracellular matrix proteins such as elastin and keratin, with a preference for cleavage on the amino side of hydrophobic residues with bulky side-chains. This family is similar to the M4 (thermolysin) family due to the presence of the HEXXH motif in the active site residues, as well as its fold prediction. Some of these enzymes also contain a protease-associated (PA) domain insert. The eukaryotic M36 and bacterial M4 families of metalloproteases also share a conserved domain in their propeptides called FTP (fungalysin/thermolysin propeptide). Aspergillus fumigatus causes the pulmonary disease aspergillosis by invading the lungs of immuno-compromised animals; it secretes fungalysin that possibly breaks down proteinaceous structural barriers. A solid lesion known as an aspergilloma can grow in a lung cavity, particularly following recovery from tuberculosis. Fungalysins are also found as multiple copies in the human and animal pathogenic fungi such as Microsporum canis, Trichophyton rubrum and T. mentagrophytes, which cause cutaneous infections.	4.98758e-42
NZ_CP012109.1\|WP_044890421.1\|4245633_4247040_-\|hypothetical-protein	gnl\|CDD\|377885	pfam07627, PSCyt3, Protein of unknown function (DUF1588). A region of similarity shared by several Rhodopirellula baltica cytochrome-like proteins that are predicted to be secreted. These proteins also match pfam07626 and pfam07624.	0.00053475
NZ_CP012109.1\|WP_021781381.1\|4262966_4264106_+\|DNA-topoisomerase-IB	gnl\|CDD\|226099	COG3569, COG3569, Topoisomerase IB [DNA replication, recombination, and repair].	1.49199e-75
NZ_CP012109.1\|WP_002639646.1\|4249718_4250840_+\|DUF1624-domain-containing-protein	gnl\|CDD\|377915	pfam07786, DUF1624, Protein of unknown function (DUF1624). These sequences are found in hypothetical proteins of unknown function expressed by bacterial and archaeal species. The region in question is approximately 230 residues long.	2.87315e-11

>NZ_CP012109.1|WP_002639642.1|4254049_4259608_-|DNA-repair-ATPase
MATDGGKGAAPVGEAALEGGSYEVIRARLMAQADALGAKANDLNGRRKALFGGTELSVIGNERVRTENNCVPCDIASVGKYLLFGYNVFIGLKRETSVADVFSLHKFEKTADGYDFSTVPESEAGGFLADPRFVKDFGELYKYYKDAKLLQIRKLDSRLLAIFQTGQTMRDIKVFRFSLDLEGRATYLDSQGERDHVFPPSHDFEWTVATRDNYVTGQHPHVNVLDQVFVETVKGDLTIKVEDNTSTGMGIYNEPVDDPDQSLDDAEFAWSQVGTLILLRVLPFRERAHRYLVFNSRTQHVVRIDAIGQACVRLPEDQGIVFPGGYYLQTGDFKVFDGAAASEGMEFKRAIRSPNGEDVLYIFHRRTDGCYVLFPYNLVRKEVQNPLVAHGMSLFADGQLVIFRSTSDEPTRVHPMQVWQTPFVSAEHAAATPPAPGYLGKVGNAELVRGISDALTIQRIAKSDKPTRRTYEDLVGASTRALDAYYWLSHEETGLQEPVETLRRTAELIIDEFEKVVAMRKRATEALAAAEAEQGTLLVRVQPENLSHAEAFMQALADLRKQRGHLITLKDIRYMDLGRVDALESAVVEASDRVSTACVEFLQTGEALAPLAGRLDELLATLEPVQTTMELAPLGEDVDKTAHGLEVLGEVVGGLQVGDPLARAKILEGISELFSRLNRVRASLAAKRKELSGREKRAEFGAQFKLLGQSIESSLSQADSPERCDEAMSRLTVQLEELEGRFGEFDEFLEQITQKREELLEAFGARKQSLVDERQRRALSLFGAAERILQGVQRRAKAFKTDDELNGYFASDAMILKLRQLADQLMELQDSVRADEVQSRVKSAKQDALRALRDRQDLFADGENLIKLGAYRFNVSTQPLDLTLLPREGELYLQLTGSDYAQKVDDPELLKFRELWEQHLVSESPGVYRSEYLAGCLLADAEDGKQGQSLDSLHEALLGGALLETVRAYAADRFDEGYERGVHDSDTASILEKLLGLHQGAGLLRFAPVPRAWAALFWAFDADEASKTVFQRRARSLARLRTTFASGGSLAEVGEALGDRVGAFLTAHGLAHSPAEARQAGRYLVEELGAEHPRFTTSGEAMSLKEAFLHELDRHGTRSAFEDDLRGLEKDLGARLELARVWLDGYLAQREGGPGEAAHVALETSVLLLTGTKLDRESAGALTATEVSGLLGNHSRIHDRKLSLRLDEFLARLGEFRQVRVPRYQAYRAMQRDLLERERRKLRLDELTPKVLSSFVRNRLIDEVYLPLIGANLAKQLGAAGEGKRTDRMGMLLLMSPPGYGKTTLMEYVASRLGLTFVKVNGPALGHSVKSLDPAEAPNATARQEVERINLSFEMGNNVMLYLDDIQHTDPELLQKFISLCDGQRRVEGVWNGRTRTYDLRGKKFCVVMAGNPYTETGDRFRIPDMLANRADTYNLGDILDGKEHLFALSYLENALTSNPVTAPLATRDPADTHRLIRMAQGEEIQTGELKHGYAAAELQEIIAVFQRMFRAQSVLLKVNLQYIASAAQDERFRTEPAFKLQGSYRNMSKLTEKIVAAMTDDELERLIDDHYQGESQTLTTAAEQNLLKLAEMRGRLSPEKAKRWEEIKQGFARVKRMGGKDDDPVARVTGQLSGIEEQLGAVRDAVVQAATHVSASNTREEAPGVVVEVLPRLESLREAVLEVAQAGRDAAKSRPAPVVAPAPAPAGPDFTPYLKHLAHLLKALTERVAAQAAAQAEQPDAPTVRMAAPTPTPPQDFGPYMEQLSRAITALAERPVNVSASVPAEALQRTAVNGPSPAELSRQIELVEGVLLPLERASRRAIQGEGEGVKSLQVWQNVTEALELLRSMLRR
>NZ_CP012109.1|WP_002639643.1|4253340_4254036_+|hypothetical-protein
MHPLRSQSRRFLLPAAAVILACGACSEDPSGGGVPLGEEQRGIATFYDANGSGNCSYAPTGDLMVAAMNTPQYANSAACGQCVDITGPQGSVRVRIVDRCPECAAGHLDLSREAFARIAEMRLGRVDITWTPVSCDVAGNIEYHFKDGSNPWWTAIQVRNHRLPIQKLEWRRGTGGWQEVRRESYNYFVNDSGMGDGPFDIRVTAPDGQQLEDTLTRVLDDGSVEGSGQFR
>NZ_CP012109.1|WP_002639644.1|4251486_4253283_+|von-Willebrand-factor-type-A-domain-containing-protein
MSAFSLKRQLTAWGSALLVVGSMPACVSRSPTHEERAVAAAPAQQATRDMPSGNEGKPAEVPAAEPLSVEEDRSAPSSGAPVATGAPPPPPAPAMVAERYKAPSAAKKSMAVGKLEMEHAARGPSPSKPMPRDDSASVARNDTGGNSFTTWKAHGFVDTAKDALSTFAADVDTASYTVSRRYLNQGRLPPTSAVRVEEFVNYFKFRYAPPEKGAFSVHLEGAPSPFSDKRHFLRVGVQGKVVSRSERKPAHLVFLIDTSGSMHSEDKLPLAKEAIKIAVKNLNENDTVAIVTYAGSTRDVLAPTPATDVKSIHAALDALQAGGGTAMGSGMELAYRHAVKKASGSVVSRVVVLTDGDANIGQNISADSMLETIRKYTAEGVTLTSVGFGMGNYRDDLMEKLADKGNGNCFYVDSLREARKVFETQLTGTLEVIAKDVKFQVEFNPASVKRYRLVGYENRDVADADFRNDKVDAGEIGAGHNVTALYEVDLTDSATEPLATVRVRAKAPNGTEASEQAFPFQRDMMRASLEKASPDFRFALAVAATADILRESPASEGWSLATAEKLAQGATDGNADRVEFVNLVGQARALKGASARGR
>NZ_CP012109.1|WP_002639645.1|4250852_4251341_-|VOC-family-protein
MQTARPFRVLGIQQIAIGGADKAPLRKLWVDLLGLTPHGTYRSERENVDEDIVTAGAGPFKVEVDLMQPVDPEKKPRVHETPLNHVGLWVDDLPTAVQWLESQGLRFAPGGIRKGAAGHDICFVHPKGSEQFPYGGEGVLIELVQAPKEVIAAFETLAAAGH
>NZ_CP012109.1|WP_002639646.1|4249718_4250840_+|DUF1624-domain-containing-protein
MTSTPASPLVISRDRVRAIDWLRGIAVLFMVQTHTLALLTPELRQSEWVARLLRVDGLVAPAFIFSAGFATALMMVRSAASGTVRTRVHRNLRRAGEVLAVATLVNWAWFPLLREPVWILRMDILQCVGLCLLIVLPVAALLSARPRILSTGAFILAMLTFAVSPLGEQVDGPWATLTEKSTFAPFPLLPWLGYAWLGVFAGTVAGAWGRAGLIKALLVLMGLGFTGAVLGDFLYGLYPPHRFFVANPSNAAARFGWVSTVLLALTWLEARMPADAAPSRLRRFVEVFGTSSLSAYFFHEMLLFYRLGGVFSFQRFFGDRSGWLQYWVLTAVIIGLTFVLCVAVDRLERVVRPALRSLAERVFRQGQHAPAGP
>NZ_CP012109.1|WP_044890422.1|4248246_4249698_+|metallophosphoesterase
MRHLRTAVPVALVGWLAACGGPVEETREVATTESALNCASLSREVHHRIRPANGDSLYTLNANEAANAATTWGYTDNRGVAFRAAAATGTGLSPVYRIYSPSRTEHFWTIDEAERNDLMQNGGYTTDENVGFYASKTPAACLVPVYRFSNTALRKHRFAITEAQRNELTAAGWVSQGIKFYAAPESTPPVDTKFTFAVIPDTQNEVLTTPATRLSHRLQWLVDNRSALDLRFVLHTGDVVNWDTPDHIQYVRASVSTEILDAAGIPYVYAIGNHDTAAVCPGGSACPGNVNANLRDTSTFNAHIPLTRFTALAGVYEAGKIDNSYHTFSEGGLEWLVLNLELWARTGAVDWAKTVLAQHPRHNVIINTHSHLTGGGTIEPRNGGYGNNSPQYVFDQLIKQYANVRFVFSGHTGNAAYLASTGVHGNTIHQILTAYHENTSNLTRLVEVDTAANTFSTRVYSPMTNAEKQDGSKFTISNVSWVR
>NZ_CP012109.1|WP_044890421.1|4245633_4247040_-|hypothetical-protein
MIRRFILCAAALCLPGVALAKPPAAGGVCATYPSAPACMGQQPACTLCHSAPPQRNVFGASLEPHLAPGAPRPLSDGDFAMALPAALRAVEAEDADGDGVPNVEELLRGTWPADPVSVPKAPRDCASGSNPVYDVCRYDPRFAYRRVLLDFCGKSPTYAELQAFTARTEEGQREFLSVELDRCTEGEFWRGKDGQLWKLAHPKIRPVGSIKSGEDAGPIPLADYYDDYALYAYTQLDGHDAREVMTARYHVRRQTEPTRYTATPSLPSQFVEEARRAGNLTSRWSLISFVMFTALPRNAASQSYRAYLGLDIAMQEGLYSIPGEPRDYDAKGVQAPACAACHATLDPLSYPFRNYNGIAGLSSARYETGRIERYFAAEAPTITQIPETGYLLGQPVRDLQEWAQVGANSDAFAIAAVTDYWKLLVGHAPTAEEQTEFVAVWQRFKGTHGYSVQRMLHDLIRTEAYGAP
>NZ_CP012109.1|WP_002639651.1|4244960_4245455_-|hypothetical-protein
MTADFAAALELPPDQLCNELGQYSCAESVHTVTLGGVDPYQSGIYEPLPITGVTTPIAVDRMALAGCSRRVELDVATPSRAVLFQGVALDAQGRLVDRGGTSVRTAINVLYQRGLQRDAHASELEAWVQLAADIESSSSSPHPGRDWMTAVCFAVLSSAESVFF
>NZ_CP012109.1|WP_002639652.1|4243398_4244949_-|hypothetical-protein
MSLRKDGRLSRRELMKALSMCGAGATVLGPLLTGCRESLESPASREAQGGVRRARLDGKPRFLIVVGAAGGASIVDSFLAVRASEAGVDAARVNTFADEQVLNVPGSPFRAVRVSSPRLGDIPVPVVADQLPFVTKHKDSMLVATTVGTSVNHAIAQKRSLTGNAAWRGRTLQECVALQYGAGCPIPNVNMGAGGYAERGTDVSLPSHCYGEVVTHASLWPLGLDGRKGLKGAPSEAVMAMARRTRNTLDARSVFGQTFEDAPALRRWNDQRIVGQPALEMQDLINRLSVLPDAPPRLPLSEFGLTGSPDGARLRAAFPDYLTDPVEGQAALAYLLLKNRVSVTVTLGPSFNVSVGGDFGIANPPLAFDFSHNDHRTGQAFMWARVLRIVDKLIDLLKSEPFDVSTGESLWDRTLIYVATEFGRTRSRVANATAFGSGHDLNNGFLLLSPMLRGNTVLGGIDPRTTLTYGFDARTGTPLPGKLESNEADIFSGILTALGVDTSGSGLPDASAFLPG
>NZ_CP012109.1|WP_002639653.1|4242821_4243388_+|DUF3105-domain-containing-protein
MRYDAAVMPRSRLFPLLTLAALTGCGETEVDPDAACARFSFPLSAPSPSHHLDSCSTEGCGNEENPPNSGLHCGNVAPCLLHSEPVHPCLYIHNLEHGHAVFLYNCPDGCPDEVAKLEAAAATAPRGGNGVHRALIAPAPGLPQRVAAMLWRRTYLADSADPEALRCLMALQDQGAPEPYLTCPSGLF
>NZ_CP012109.1|WP_002639640.1|4262027_4262789_-|hypothetical-protein
MNAFLDTILAFPTAIFTIVLGVVMTYWLFVIVGAVGIDVFDADVSLDGDISVEGAGKALGSAKALAGSDADFDVDGGGILAAMGFAGIPITVSVSFVVFIAWFLSVMSAQPLNEALGGVLPSWLLNSGLGLACFAAGTVTAGFAVRPLRPVFVAKRAPGRDSLMGRVCTISSGSVTARTGHATFEDGGAGVILNVVCAKPNELKRGQPALILAYDAERRVYEVEPVDWLLPEEQAQLQDPARAAALARVKARG
>NZ_CP012109.1|WP_021781381.1|4262966_4264106_+|DNA-topoisomerase-IB
MTVLAEPSARPPHQQATARRPARGETQRERLQREGIRRRGTPVRGFRYVHANGKSVPRAERERISALRLPPAWAHVAIAPSSKAKLQAVGQDAAGRWQYRYHPDHTVERDVEKFQRIVGFARALPRMRHRVNADLRKQGLGRDKVMAAMLRILGTCFIRPGSQRYADTNGSFGLATLRRRHVRVAGDTVYFDFPGKSGKQQRRQLRDRRVANVIRRLLTVPGRDVFKFVLDDGAVVDVRRRHINAYIQEVMGEKYSAKDFRTWAGTLICACALARARKRVHATGGTDGRVKPTVLKKTMVAAVKEAAEHLGNTPAVARSSYIYPSVLALFERGQVVDTWFESVDELAEAKCGSLHCSEKALLDLLDTTRKRRRKRARTH
>NZ_CP012109.1|WP_002639638.1|4264135_4265113_-|methyltransferase-domain-containing-protein
MVYGFWVSRCLQIMAELGIADIIGDVPKTAEELAEASGTHAPSLRRMLRLLSGLGVLVKDESNQRWGLTEMGEMLREDNPGSVYGSLRAHGLLLSWQAWGDLANSLKTGQPSLEKFMGTSFFDYMRTHADVAAIFNNSMAAYQTLNAPAVVNAYDFSRTRSICDVGGGTGMLLAHILQANPGVRGAVFEMPHVAIETRQRLAEQSLAERCEVLEGDFFVRIPEGYDTYILSQILHDWDDERSLRILQNIRASMRPDSRLLIVETVLPGDNVNHFGNLYDMAMLVVVGGRERTHAEYAELLEKAGMKLANVHPTTMPPSVVEAVVA
>NZ_CP012109.1|WP_044890425.1|4265282_4266008_+|2OG-Fe(II)-oxygenase
MRAYVTCREALPRSAVHELRTALLGSRFVARSPLMGTFQASRGFAIIFTHEGRTTLEARFPFLVPYLTRVLAPASARGLLPWHERLWGARKQRPVPNAFYLNLLLLDAGRGVGRHIDATLQDPSGVPDATPQHVSVLYLRVPEHVRGGELCLHHQDTPVGEVRPREGLLVHFRGDLQHEVRPFVGGAEGASRVSLVCEQYVFAPEALARIPSFRIQSKAGFAAYLDDQRNRPDGGSAGTLE
>NZ_CP012109.1|WP_002639636.1|4266035_4266413_+|DUF1330-domain-containing-protein
MAVDPRSTDVERFIQEDPGGPVVILNLVRFKEGGRASYEAYANAVMPFILKVGAQPLYAGDGSTALVAEPGQTWDAVLLVRYPSRAAFLQMVADPEYQHISHLRTEALQEAVLQATTPWASSPES
>NZ_CP012109.1|WP_002639635.1|4266414_4268091_-|amidase
MKKPDSPPDSPAGLSRRALLGGTAVATALVSLDARGRAFAAGAPGKEAPPAAKPFEMEEKTVAELQAALASGEYTAQGLTERYLARIAALDTVGPLPLRSVIELNPDALALAAALDQERREKGARGPLHGIPVLLKDNIGTADKMETTAGSLALVGAKPARDAFLVERLRAAGAVILGKTNLSEWANFRSTRSTSGWSARGGQTRNPYARDRTPSGSSSGAGTATAANFCAVSVGTETDGSIISPSAAASLVGLKPTVGLVSRSGIIPIAHSQDTAGPMARTVADAAVLLSVLAGVDPADPATAASRGKAHADYTRALDVDGLKGARIGVPRERFYGYHAATDARMEEALALMKSRGAILVDPAPIPQADKLQAPEFEVLLYEFKAGLEAYLASLGEGRAPRTIAELIRFNEEHAADELPFFGQELLHQAQAKGPLTDKTYVKALQDCRRLSRAQGLDAVMKKHRLDALVAPTEAPPGLVDLINGDHWLGSSSTPAAVAGYPSITVPAGYVRGLPVGLSFIGRAWSEPVLLKLAYAYEQASKHRRPPTFAATADLGAR
>NZ_CP012109.1|WP_002639634.1|4268166_4269225_+|patatin-like-phospholipase-family-protein
MASHITLLAGPDALQLLRERGLRGEDVDVVPGASGGPKWLVLAGLDRALFGGLFQNRTRPLHLIGSSIGSWRLACLSQKDPVLALRRFEAAYIDQRYPPKPSPAQVTEQCERILDALLGDEGEADILQHPWARLHVITALCRGMAGLEDTRAQLLGFLLCGLGNLVSRRTLGLHLERVVFHAAGETSPFAGLKDLPSTHVPLTRENLRLALLASGSIPMVLRGVRIPGAPAGVFRDGGIVDYHLDLDFGSGSGLVLYPHFYPYVVPGWFDKALRWRHTRPGNFRRALLIAPSPELVARLPGGRIPDQGDFEQLKDVERMRAWNQVVAESERMGDEFLELMATGRIADHVRPL
>NZ_CP012109.1|WP_044890426.1|4269392_4274762_-|myxosortase-dependent-M36-family-metallopeptidase
MEFPHVRRLVATLSGLALVLSGTSAVARTLPNYDALQDAKPAGRAAAGFKPVNSSLKGARIAHKDALTDSPTFVWTHRTAEQTKLRAEYAKMAPAKAAMAQLSAHAPLYGLRSFETAGATVTNVSANKQGVKIVTLSQKTSGIEVFRQSLNVLLNKHNEIVAISGNLSKHASAEMPKSKARFQVPATEAIAAAYKDLTGTAIDGSLLSRVSASSKSDTYSHYTLASYARPLGEELRIPARVKQVYFPLPSKLVPAYYVELYTGRADSRNSDYFAYVISATDGQLLMRNDLTAHAEFGYRVWADTTPPYTPHDGPHGNVGTPYPANAPNGYVSPYIPSTLITLQNVPFSQNDPWLPDGATVTRGNNVDAYADLVAPDGFGPGDRRPAVTAPGVFDRSIDFGIQPNANADQIDAATTSLFYLNNWLHDWYYDAGFDEASGNAQASNFGRGGLGNDVLLAQAQDHEGTDNANMRTPADGASPRMQMFLFSGTRNSRVTANAPAEVAGDYQGGISTTFGPQTFNATGNVVAAIDAANTNGPTDRDGCTALTNAAEVAGNIAVIDRGSCDFTIKVLNAQNAGAIGVIIHDNVAGPTIDMGGTPASPINIPALRVNLDDGNRLRSAIPGLNVTLYRGATQWIDGTLDNAIVAHEWGHYISNRLIGNSSGLVNNQGRGMGEGWGDFTALLMMVRAEDINVPTNANWNGAYAAAAYATRADADSEWFGIRRTTYSSDTSKNGLFYRHIMDGVALPTGVPFFSNGAVNSQVHNSGEVWATMLWECYTSLLRAHPFQDAQDRMKNYLVNAYKLTPSAPTFLEARDAVIAAAYANDPADAERFWAAFAKRGAGVGAQAPDRYSTNHAGVVESYGYGSAIQFVSAEFFDDIEGTTCDRDGVLDNGETGRIEITVRNVGATTANGASATLFSTTPGIQLGNGGGGVFPSIPVFSEAKISVPVSIHGAAPFSEANFSIAVRDDGQAIPGDIINALTLITNFDEAEQVTNIEDVEVTPSKLPWTTDYDEALTPDVWGVVQLTETNRTFYAEDLGSYSDIRLITPELNVSATEPFVLNFLHAYDLEGDPVFGYYDGATVEITEDGGNTWVDIGGPIHNATLENYTGNRNPLAGRPALSGYNEEFPGLIPASINLGTAYAGKTVQIRFRIGTDESFGATGWLLDDLEFTGITNTPFAAIVPEDGICVNRAPAVNAGADVSAAARSQVSLTGTATDPDGDALTYAWAQTAGPAVSLTGADTLTLSFTAPQVTESTTLTFTLTASDGTNSSTDSVNVTVSPANRAPTVNAGIDATAAERSEVTLSGSASDEDGDALTYLWTQVSGTPVALKDYTSPTATFVAPEVTLDEQLVFRLTVSDGVASANDTVTVTITNVNRAPVVTDTSVAFAAGVVTVSASALDPDGDALTYSWAQSAGAPVSINGADTASITFATPAAGSYEFTVTASDGTASASKAVAVTIISGGGGGDPTNTPPTVNAGVDGTASAGDIVTLSGSASDAEGDPLTYSWQQIGGTPVSLSDASSLSTTFVAPGTANGDTLAFLLTVSDGNSTVSDVVRIIVAADPGTAPGNTAPVVSAGAPATVTAGSTVTLNGTATDADGDALISTWTQIGGPAVELSDASSLTPTFTAPATTEALSFLLLVTDGTATVQAVTTVIVTEENVAPVAAARAVVSGNQTSATLDGSASSDANGDALTYRWTQTAGPTATISGADQAVAVANLPDLKGKTENFSFRLTVTDAHGAEHTTTVQFSARNGEDEGGGCSATGAGAPAGMIGLALLGLLRRRRQN
>NZ_CP012109.1|WP_002639632.1|4275365_4276310_-|aromatic-alcohol-reductase
MDTDIVHVLLVGGTGRFGGKLASALLSRPGIHLHVLVRPGTRGESLARLAEHGVTLVSGTLDDMRSLDSALEGVDAVVSAVRGPPDVFVDGQLRLLDSARRHGVLRFIPSDYALDSTDPEAGSAFMAAHRRVADAVVRSGVPYSFVLCGAFMEAALSPQSQVFDFERGLVSFWGTGDEPFDVTAMGDAARWVADVVVDPRAVGRRLEFVGDVVTVNEVASLYEELTGQRLRRVRRGSVEALRCHLARPRPAGTPVDTSSSALSLLAQLAGKGRLHEPSNSQYPRHRPMSVRAFLQAGWMPRAPTRGEFSVERLP
>NZ_CP012109.1|WP_044890480.1|4276949_4278881_-|S1-RNA-binding-domain-containing-protein
MGPKKPKATFGDVMLGIPSGGSRSEGGRGEQRGGGGRGGERGGGRGERDAQPRPSGSAPREDRGPRGGGDRRGGGERRGQGPMVVVKRATGAIETRGPVGDAPADATATSEETSAAAEASAATPAPSPRPVTPTPAPTSALYEEVPESQSFAEMFEAQAKEGGTPSRKGLRVGEKVRGTIFQLGADTAFVSVEGAAKSEAMIELRELKDDEGILRFGVGDTIDAHVVEVGAKGILLSRALAKGSANLALLAEARASGMPVEGLVLSVNKGGVEVAIGDIRAFCPISQLDLRYVEKPDQFIGEKLQFRVSEVRERNVVLSRRALLEDEQRQLAAETRKNLAQGKIVKGKVTGVRDFGVFVDLGGVEGMIPVSELSYTRVGHPSDVVKVGDEVEVEILRMEAGQPNSPDKSKQKERITLSMRSRQEDPFQKALSEINEGDRLQGKVVRLQQFGAFVELRPGVDGLVHISALSDRRIAHPRDVVQEGEVIWVSVEKIDTQEKRIGLRRISEEEAQRPPEERASAAAAPAQPAAPRPKVGQVVMGKVDRIEPYGVFLAFPGGKGLLPASETGTERGTDLRKHYSLGQEVKVAILDIDASGKIRLSVTAAIRAEERAEVEAWQKTQQPQGAGKKGFGTFADLLSKARK

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Crispr_ID: NZ_CP012109_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_10

5112421-5112681

Orphan

Consensus_repeat	Method
GCAGCCTCNGCGNGCGNCTCGGANACAGTCNCT	CRT

4 spacers

The CRISPR arrays of NZ_CP012109_10

>merge|NZ_CP012109|10|5112421-5112681|CRT
GCAGCCTCGGAGGCAACCACTGCAACAGAAGCACTCTCCTGCGCGCTATCCGCAGCCTCTGCGAGCGACTCGGAGACAGTCTCTGCAACAGAAGCACTCTCCTGAGCGCTATCCGCAGCCTCTGCGAGCGACTCGGAGACAGTCTCTGCAAGTGAAGCGCTATCCGCAGCCTCTGCGAGCGACTCGGAGACAGTCTCTACAACTGAAGCACTCTCCTGCGCGATAGCCGCAGCTTCAGCGGGCGGCTCGGAAGCAGTCCCT

>NZ_CP012109|10|1|5112421-5112681|CRT
GCAGCCTCGGAGGCAACCACTGCAACAGAAGCA	CTCTCCTGCGCGCTATCC
GCAGCCTCTGCGAGCGACTCGGAGACAGTCTCT	GCAACAGAAGCACTCTCCTGAGCGCTATCC
GCAGCCTCTGCGAGCGACTCGGAGACAGTCTCT	GCAAGTGAAGCGCTATCC
GCAGCCTCTGCGAGCGACTCGGAGACAGTCTCT	ACAACTGAAGCACTCTCCTGCGCGATAGCC
GCAGCTTCAGCGGGCGGCTCGGAAGCAGTCCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002635082.1\|5128441_5131291_-\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP012109.1\|WP_002635084.1\|5126065_5127178_-\|YjgP/YjgQ-family-permease	unknown	unknown	gnl\|CDD\|367632
NZ_CP012109.1\|WP_002639217.1\|5105924_5106266_-\|(2Fe-2S)-ferredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239278
NZ_CP012109.1\|WP_002639210.1\|5097128_5098283_+\|lytic-polysaccharide-monooxygenase	unknown	unknown	gnl\|CDD\|225932
NZ_CP012109.1\|WP_002635081.1\|5131294_5132839_-\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854
NZ_CP012109.1\|WP_002639215.1\|5102771_5103860_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_021781285.1\|5124953_5126069_-\|YjgP/YjgQ-family-permease	unknown	unknown	gnl\|CDD\|367632
NZ_CP012109.1\|WP_021781286.1\|5117616_5119578_+\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP012109.1\|WP_002639211.1\|5098422_5099925_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002635086.1\|5122489_5123614_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340838
NZ_CP012109.1\|WP_002639213.1\|5101192_5102137_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP012109.1\|WP_002635087.1\|5121257_5122403_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340833
NZ_CP012109.1\|WP_002639212.1\|5099963_5101196_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002635080.1\|5132943_5133435_-\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|223642
NZ_CP012109.1\|WP_002639218.1\|5106870_5109672_+\|vitamin-B12-dependent-ribonucleotide-reductase	unknown	unknown	gnl\|CDD\|235828
NZ_CP012109.1\|WP_144429749.1\|5102133_5102658_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP012109.1\|WP_002639209.1\|5096276_5096987_+\|Bax-inhibitor-1/YccA-family-protein	unknown	unknown	gnl\|CDD\|198414
NZ_CP012109.1\|WP_002635083.1\|5127174_5128440_-\|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl\|CDD\|234856
NZ_CP012109.1\|WP_002635085.1\|5123623_5124952_-\|O-antigen-ligase-family-protein	unknown	unknown	gnl\|CDD\|377422
NZ_CP012109.1\|WP_002639216.1\|5103972_5105769_-\|glycosyl-hydrolase	unknown	unknown	gnl\|CDD\|119365

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002635084.1\|5126065_5127178_-\|YjgP/YjgQ-family-permease	gnl\|CDD\|367632	pfam03739, YjgP_YjgQ, Predicted permease YjgP/YjgQ family. Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this.	7.60771e-81
NZ_CP012109.1\|WP_002639217.1\|5105924_5106266_-\|(2Fe-2S)-ferredoxin-domain-containing-protein	gnl\|CDD\|239278	cd02980, TRX_Fd_family, Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:ubiquinone oxidoreductase (NuoE). TRX-like Fds are soluble low-potential electron carriers containing a single [2Fe-2S] cluster. The exact role of TRX-like Fd is still unclear. It has been suggested that it may be involved in nitrogen fixation. Its homologous domains in large redox enzymes (such as Nuo and hydrogenases) function as electron carriers.	2.03992e-22
NZ_CP012109.1\|WP_002639210.1\|5097128_5098283_+\|lytic-polysaccharide-monooxygenase	gnl\|CDD\|225932	COG3397, COG3397, Uncharacterized protein conserved in bacteria [Function unknown].	1.9256e-76
NZ_CP012109.1\|WP_002635081.1\|5131294_5132839_-\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
NZ_CP012109.1\|WP_002635082.1\|5128441_5131291_-\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	2.38372e-20
NZ_CP012109.1\|WP_021781285.1\|5124953_5126069_-\|YjgP/YjgQ-family-permease	gnl\|CDD\|367632	pfam03739, YjgP_YjgQ, Predicted permease YjgP/YjgQ family. Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this.	1.21513e-62
NZ_CP012109.1\|WP_021781286.1\|5117616_5119578_+\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	5.01965e-16
NZ_CP012109.1\|WP_144429749.1\|5102133_5102658_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	1.95236e-26
NZ_CP012109.1\|WP_002639213.1\|5101192_5102137_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.24716e-06
NZ_CP012109.1\|WP_002635087.1\|5121257_5122403_-\|glycosyltransferase	gnl\|CDD\|340833	cd03804, GT4_WbaZ-like, mannosyltransferase WbaZ and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. WbaZ in Salmonella enterica has been shown to possess mannosyltransferase activity.	3.82263e-147
NZ_CP012109.1\|WP_002635080.1\|5132943_5133435_-\|DNA-binding-protein	gnl\|CDD\|223642	COG0568, RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription].	2.20918e-07
NZ_CP012109.1\|WP_002639218.1\|5106870_5109672_+\|vitamin-B12-dependent-ribonucleotide-reductase	gnl\|CDD\|235828	PRK06556, PRK06556, vitamin B12-dependent ribonucleotide reductase; Validated.	0
NZ_CP012109.1\|WP_002635086.1\|5122489_5123614_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340838	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.	1.32629e-83
NZ_CP012109.1\|WP_002639209.1\|5096276_5096987_+\|Bax-inhibitor-1/YccA-family-protein	gnl\|CDD\|198414	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins. This family is comprised of bacterial relatives of the mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. In plants, BI-1 like proteins play a role in pathogen resistance. A characterized prokaryotic member, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.	1.86986e-61
NZ_CP012109.1\|WP_002635083.1\|5127174_5128440_-\|phosphoribosylamine--glycine-ligase	gnl\|CDD\|234856	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional.	0
NZ_CP012109.1\|WP_002635085.1\|5123623_5124952_-\|O-antigen-ligase-family-protein	gnl\|CDD\|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	4.48219e-09
NZ_CP012109.1\|WP_002639216.1\|5103972_5105769_-\|glycosyl-hydrolase	gnl\|CDD\|119365	cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.	1.004e-141

>NZ_CP012109.1|WP_002639218.1|5106870_5109672_+|vitamin-B12-dependent-ribonucleotide-reductase
MDKELSSKSTVNGKARRTPARKARAATTAGLTVERFFTTPGVDPADELAWEYRSASITGEDGKAVFEQKNIEVPKSWSMLATNVVASKYFRGTPGTPERESSVRQLVARVVDTLTRWGVEGGYFTRDTDREAFHAELTHLLLRQKASFNSPVWFNVGVEAQPQCSACFINSVEDNMESILTLARTEGMLFKYGSGTGSNLSTIRGSKELLAGGGTASGPVSFMRGFDAFAGVIKSGGKTRRAAKMVILNADHPDILEFIRCKSSEEKKAWALIEAGYDPSFNGEAYSSVFFQNSNNSVRVTDDFMKAVVNDGPWTTRTVREGLPLDTHQAKDLFRELAEAAHLCGDPGMQFDTTVNSWHTCSGTARINASNPCSEYMFLDDSACNLASLNLMHFRTIDGDFDVTAFRHAVDILLMAQEIIVGNSRYPTERIEKNSHDYRPLGLGYANLGALLMATGLPYDSAEGRNYAAAITSLMCGEAYAMSARLAEKQGPFAGYAKNAEPMLSVMRKHRKAAYHVAPEGVSTALYEAQKDAWDRALALGETHGYRNSQVTVLAPTGTIGFMMDCDTTGIEPDIALIKYKKLVGGGMLKIVNQTVPLALEKLGYRQTQAQDIISHLDKQDTIEGAPHLKAEHLPVFDCAFKPAQGERSIHWMGHIQMMEACQPFLSGAISKTVNMPSDATVEDIEKAYLEAWKRGLKAIAVYRDGCKRTQPLNTAKDSAKDTRAAKATVAPEPAPAVQPEPRAVRRRLPDERRSITHKFSIGGHEGYLTVGMYEDGLPGELFIVMAKEGSVVSGLMDSFATSVSMALQYGVPLKVLVDKLSHTRFEPSGFTGNPDIPIAKSITDYIFRWLELKFLPSGEEDAVLDRVDVRASREALPAQTAPVQQLPAASSSKRSTWLNQADAPPCHTCGAIMVRSGACYKCSNCGATSGCS
>NZ_CP012109.1|WP_002639217.1|5105924_5106266_-|(2Fe-2S)-ferredoxin-domain-containing-protein
MAPPFQRHVFVCTNRRPDGNPKGCCASKGAEEVRTAFREELDKRGMKGRMRANAAGCLDTCSFGVAVVVYPEGTWYGGVKVEDVKEIVEQHLIEGRPVERLLMPFSRKAQQPG
>NZ_CP012109.1|WP_002639216.1|5103972_5105769_-|glycosyl-hydrolase
MRRSWWASGLIATALSVAGCDSEVTTFHEMDRLSAHASALAAEWAAGVSYNVGARVTYQGRLYECRQPHTSQADWTPLAVAALWLDLGPAGSDVDAGTGGNDAGTGGDVTAPTVGMTASTSRITVAGPLSLTATATDNVGVTRVEILENGSVVASGTSFSRAFTGWEQNGTYVYSVRAYDAAGNMGTTSVTVVVEIQGGPPPGGKKIVGYFTAWGIYARNYHVSNVPPSKLTHINYAFSNITPDGRCVLGDPYADIDKGAGWPGEWDPGALRGNFRAFKELKRTNPHLKLLISVGGWSWSTHFSTVASSAASRAAFVKSCVDLYIRGQYPGVTPANGEGVFDGIDIDWEYPVGGGLPGNSNSPADKRNYTLLMQEFRSQLNAVTAQTGRPYLLTIATGASPDLLENKQETKNLADVLDWINVMSYDYHGAFEPTTNFHSALNRVTGDPGAAVGFYTDGSVAKMLQLGVPPAKIVVGVPFYGRGWGRVPNANNGLFQSGVPINGTWDDGSSGPTGVFDFKDIKNRFERAGSGYTKFFHPEAKQAFVYSPATGIWIGYDDAQSMSAKADYILSKNLGGAMFWELSGDDGSLLDTLAQKLR
>NZ_CP012109.1|WP_002639215.1|5102771_5103860_-|hypothetical-protein
MSLAAAVVLVALSSASMAAEPWTAVARVASEEEAALLERVKGQSSDLSVTLEPSPGGSLTGTPVEQWRAAEQLAARHDARAVLWFVREGQDVRVLVAELDGRHLFTREARLGEVPGTLEWSAGAEALALAARSALRAVDAGAPLGVVVPPRVDDAPMVTPPASTARAVDAVPRDAAATSLASQREGAVGTWWLSVGGHAALDGYARAGHQGVSLGAGWQPGRWRLRLQLLAGLPARLRDARTEVSLGQHAASAWAGWPWAVTQRLDVEVGVGAGAVVFRRRTSVLAPDVEAAPPAMTWALLTGPELRARWRWAARLGVEAGLSAEVLLGRPELRYVIDGNFVSRGDGWALRPRLHVALVVFP
>NZ_CP012109.1|WP_144429749.1|5102133_5102658_-|sigma-70-family-RNA-polymerase-sigma-factor
MQGEREATGALLSELLPRVRNLVRYLVRGDSDVEDIAQEALIALVRGLPSYRAEGRFQSWADRVVARTTFAWMKRSRGREAQHADAPVELVAVPSEDALPDEYVHRRRMMTLLDRLSNEQRHALVLHHVLELSVPEISSELGIPFETVRSRLRLGRTNLRALATAEDGGGEAQG
>NZ_CP012109.1|WP_002639213.1|5101192_5102137_-|tetratricopeptide-repeat-protein
MSDIREEGDDALTALLPPLDEAAGPARRISREKSAAMVLAALEASTLTVRAPRRPFGKRPPVCLMTGAILVAGAAAAIWSFTRSARTPEVQAKTAVEVKAAHAEAPRAVDAPGVTEPAREVLAQPESVSDVPASSEVTREVRAQSKDSGTVAFRAPAQGVDSSSGAPEVGTARPRQPASGVAPPAAARAAEDLLLKANGLRSKGQWKEAESLYLRVIRAQPSSLAAYVARVASGSLRLEHLGDARGALLQFKAALRLQPRGVLDQEAQHGLAEAHRVLGDRDAERRALESFLATHPDSPLGPSARARVQELSAR
>NZ_CP012109.1|WP_002639212.1|5099963_5101196_-|hypothetical-protein
MSGRWHLTAALALAMGGCTRGDLVAIVTTPDGGGTGASADAGTQDGGGPPDDWEAYCAGRGPPIFVGEAETDAHVCSGRLAEQTFRQALCTCEGLTLGASLDADAFRGSAGTYQPGGAGGDVGVNGALSANDTVNVGGSLRVGGAGGLQLGRAFYVGETLHSSGPLSGSPVSASVVGDARVRGDVSLPAFHVGGVLTVPEGATLGPVEASAVRREPVDPVTPCACDETAQVDVTGLIARHAHDNDNAAIGLDAAAMEDIEGERSLALPCGRFHLTRITGTGRATLTVRARTALFIEDIVDLAEGLTVDVQAPGELDLFLGGSVAVAGPLSLGSTATPSRVRVYVAGASVLALSAGSTLAGNLYAPHATLSLSGGAEVFGSVFVRHVEASGPLRLHYDADIRDAGAACSED
>NZ_CP012109.1|WP_002639211.1|5098422_5099925_+|hypothetical-protein
MSPRIDRRTPTAVAPTSRQGTEQPLARQGADAATSGQVRTQRNADGFQPNVARDRATTNLNGRQPITPQAPVTARPLTPSEVASVNQVLQEATNSRDPSVLVNFLRDNPDPAMQAALMDNLFAFGPVAGQILDKAGRLSAADQQVLSSALDTAFRSGAVTVEELTAGVGSHGRGSWGGETHEGLAKIVAGTGNPELITAYAQREMQIMSDGNTPDPARSVAVATALAGLPPEQLQDFLKNNPDGIGKVLGNLNNPIISGGTGALGGLLDAASAIKPPTQESLKLFLDSIQQVGTNPESRAAAARFFMEHSDAILSGASDLSGSVGSASAGRLSEFFTRTLFTEPPFEGQDALRSFVNTKLGDMRAALETQANANPPSQETQRLARSMGSLLGAIEGGFLLSVEELKKNNEAAAGLAGLIFKLKDVIPTSSIPGLGQLQNLTLGQIEKWVTDAVQRDPDKARDAIPFHRLFGEQITNPTLRSIYDAARLTSLEDRRLGLSN
>NZ_CP012109.1|WP_002639210.1|5097128_5098283_+|lytic-polysaccharide-monooxygenase
MTSAVQRCLGVSLAVVSMLSAGVALAHGSMEVPLSRVYGCFKEGPETPKSDACKALIQAGGTQALYDWNGVRQGNANDRHREIIPDGKLCSGANESHRGLDLARTDWPSTLIAPDAQGRFEFVFHATAVHATGYFRLYVTREGYNPALPLKWSDLEANPFCSITNVSAQNNRYRLNCPFPQGKTGSHVLYAIWQRSDSPEAFYACTDVKFSNTPPPPSSWRELGQVQAREDLPAGSSVTLRVFDAQGGDAESHVHPLPAATPAAQWIHGLAQRVNAASNRVQVGVLDTAGRVNPVQNATANRVYARDTGYTFQLDITKPPPGGNGDPIYPAGLESYTAGSVVRGTDGLRYRCKPFPYSGWCKGSALHYAPSTGMNWQDAWERIP
>NZ_CP012109.1|WP_002639209.1|5096276_5096987_+|Bax-inhibitor-1/YccA-family-protein
MAWETSGWQASSSDAADSILVQESQRAFMSRVHGWMFIGLLVTGFTAALTFSNPAVFETVIQWRLGFIVAQLGAVFALSFLAPRLSGPVAGVLFLGYSALTGMTLSVLMAIYTMGSLAQAFFLTAAVYGAMAIYGTVTKKNLSAWGTFLFMGLVGVVLASIMNLFLRSDAMGFVVACASVVVFAGLTAYDTQKLRAMHAGAGYNSIAALSIVGALRLYLDFINLFIALLRLTGSRR
>NZ_CP012109.1|WP_021781286.1|5117616_5119578_+|trypsin-like-peptidase-domain-containing-protein
MKRFPLACLVTALVGSAPTALASETVCQQAAPSSESQRATKVGEDVFRRFESAHPYATTQIRASDGPVHTDVITHPGAAYIAPHFERLDLEAGDFVVVRSPDGTRAWKYDNSHPGARSGFWAIHIPGDTAIIELHSQDSVNRRGILNKHGYSIDRFARGYSNEEMGLSDDKALCGPDDTQWAPCYASSEPTIYGRSRPVARLLINGSGACTGWLVGSEGHLMTNQHCVGSASEALNTSYEFMAEGASCATSCASWFGCPGNVIAGGTLVKVDTPRDYALIRLSQNPVNTYGYLQLRASGAVVNERIFLPQHPAGHGKKIAVRSSHAQDQSGFAEIFNLNAPACQSGGPNDVGYYADTQGGSSGSPVIGHADNLVVALHHCANCPNRGVPIQSVISHLGTDLPQCALPAAGCPDTNGNGEPPPPPPPPPPPPPPPPSNPFPYDATNTNSAQQNTTSYTLALTAGQELTIATCGLTGASFTGDTYLRLRDVQGTQVAFNDDACNGRGSSISYTVATSGDYVIHAGCFSSGACSGRVAWTTSGGGSEPDPTSGSFTFQASSTNSAQQGTTTRDVNIAAGRRITVATCGVTGASYTGDTYLRLFNGATQAAFNDDACGSDNRGSSLTYTAPTATTLQIRAGCYSNTSCSGTVVWNIQ
>NZ_CP012109.1|WP_002635087.1|5121257_5122403_-|glycosyltransferase
MKVALVHDWLVTHRGGERVLDALCEVLPDADIYTLVHKPGSQSPAIESRRIYTSFLQHIPGIHARYRHFLPLMPSAIEALRLQGRYDLVLSSSHCVAKGLRTPPGTPHLSYVHAPMRYMWDLFDDYFGPGRARLPVRAAAHAVRPWLRRWDRQTAAGVTRFIANSRHIASKVQRFWGREAAVIHPPVALERFAQVPLEGGGQGGYFLWLGAFAPYKRLDIALEAFRELDAPLWVVGTGQEASRLGARRLPDNIRFLGNVSDEALPALYRDARALIFTPEEDFGITPLESQATGRPVIAYGKGGALETVTEHTGVFFSEQTPAALAAAVRRFDVWEASFRPDAARAQAERFSRAAFQSAMLREMEQLVRGVLPESPESPSGL
>NZ_CP012109.1|WP_002635086.1|5122489_5123614_+|glycosyltransferase-family-4-protein
MWYAVAVAHVLLDLRMVRGRLHGIARYALELARRMPALAPDLRFSALVPPEGLTPGLGALTPRMPLHRSLARFLSPLEQPALTADLVRLAPDAFHATSFSLPLFWSGRLVATLHDANHLALADQYSPAQALYYRAVVGPRARRATALITVSEFSRDEIARYLDLSPYRLQVIHNGVEARFQPPTQAEASEFRARHELPARYVAAVGNAKRFKNLGLLKDFAAELPVPVVLLAGKGAVAHELGLHENVLDLEELSEDEMPVFYGAASALLLPSRYEGFGLPALEAMATGCPVLASDTTALPEVVGNAALKLSPDDAPAWRDATLRVLRDDVLRRELVELGRERVAHFNWDDCARRTLAVYRRALEAPSPGGARGR
>NZ_CP012109.1|WP_002635085.1|5123623_5124952_-|O-antigen-ligase-family-protein
MSAFMETASELSLDLRWRRAVSGVLVLWTVGLVLAEVVLQVATGAAVVLSVVLLALGKLSLARDVRAYVVTSAALCVWQVASPAVALLTGASDAWPRGARYGQVLDALAGPAAATLGAAGVPWLLLAGVLAGGWLLAALLGVFQNRVRWSVELPAFLKLNLGRLHENFGTEESPRYAAGGFFSHRLRFAHGAIAALGPTLAVLGGVEQARRRVLAGVVVMGMLVSIYNAFARAALGAALMVSVLALLLLVQGAARRVGLGLVIALVAVVSLTPAWRARMEKALGNIYGGEREHAMSVGWSLVRDYPLTGVGFGNHKPAALATQDETGITDLLATDSHNLWLTVWAETGLVGLLLTVVVHVLLAKALIRRYRQGSLAATGALLSWVGFHVLAMVHYLPFHSSVYLSFSFVWGLGLCEGSDVLRGRAVRESFVALAKGSPGATS
>NZ_CP012109.1|WP_021781285.1|5124953_5126069_-|YjgP/YjgQ-family-permease
MRATLFSYVLGTYVRYALGILTGLVLVFVVVDFVDRAKLYSGPGWVLAAAELYFYKAMMSVQQLGPAALLLAAGTTVSALRKQGEVTAIRALTFGPSALYLPILLASFAACVGLVVFDERVATYSGRRVDEITTQRFNKWGDWRFYYTPKQWFRRGDNIFFLRGGGAQEGFQDVSVFTVTESFDLRRRLDASGMFPVEGMRWRLTDVVERTFDGEGKTTLRQLPEAEYDLGVAVTAFRIRPGRPEQMRASELREQIAARRDVGLATKQFELALHNRFAYPMAAFPAALLGVGLALRSNRRGHLTAAIMEGLLTAVAMWGLMMVCRTMVLTERLSPMVAAWTPTVLLSLIAGAVWLHREGRLPLPRRGLLVR
>NZ_CP012109.1|WP_002635084.1|5126065_5127178_-|YjgP/YjgQ-family-permease
MTRLSRYLLKELLVPLGVWVAFMFLLLFVMQFLRGTDVLLGSSVTLVDLARLLAYLAPHFLMMALPIAFLLAILLGLGRLGEDRELTALQALGVGPARLVAAPLIIAVALSALMLVITSTAQPWGLAGLKVLVSEVIRKNAVGDVKSGVFYEDLSNLTLYAEQVSADGKWTNVLLHDDREPNSPLLVLAQRGQVGTSTSGEVLRFNLEAGEAHRSSGREEETYSVIRFDRAEISVGMGASMGKRSRFSFSREELTPGELLEAAREADARGEDSRTYRMALHSRMGSALAPIAFALLGTPLAMGRRQSGKAWGYLLTLGGYVLYYLLSRVFEQMGQKGQLPVALAGQMANLVFITVGLVAMYRVSRSGTLK
>NZ_CP012109.1|WP_002635083.1|5127174_5128440_-|phosphoribosylamine--glycine-ligase
MDVKVLLLGSGGREHALAWKLSQSPRLTQLLCGPGNPGTAKLGTNVPLRADSPEAVAAFAKQEAVDLVVVGPEAPLVAGVADALAAAGIPCFGPVAAGARIEGSKAFAKEIMAEAGVPTAAFRTFTDVAAAEAYAVEQGRIVVKADGLAAGKGVIVAHDVEAARAAVRAVGAMGVAGQTMVLEELLEGEEVSAMALCDGERYAMLPLSQDHKRVGEGDSGPNTGGMGAYSPAPFLSAEQLAEVGERVVAPTLAVLRRRGIPFRGVLYAGLMLTRSGPKVLEFNARFGDPETQVLMMQLGEDLLPLLDACARGALAPRTLVSAPGASVGVVLAARGYPDAPEKGQRIDGLDAVPEDATVFLAGVEARDGALVTAGGRVLTVCARGEDLARARERAYAAVAAVRFDGMHFRRDIGARGMKAAP
>NZ_CP012109.1|WP_002635082.1|5128441_5131291_-|zinc-ribbon-domain-containing-protein
MRIVCQKCAAAYAIDDKLITAKGVRAQCPRCRNLQLVRRDPSAAPAQAPQPPAPVTLTPVTGAAPASNPADDLFGDFGAPPPSPGGAPAGASRGGKEAPGSDLFGDLGALQSPTPSSAPPVDPFADLGAPASGGGRPEAEDPLLDFLGPPPSAPSGTDTSPARAPKAAAAPQPASSACRVCQKALTDSFDQALGVCDDCRQSGAADAPPATGERPAAAAGSSDFLPPMSDFGGAAAETSDSRAEPGSGSESRSGARIPISTDIIPDMGPEPRSGIRASAPSLGAEPRSGVRPSPARTVSAQIPAAGRSRGGKGVLVAGLVGLVVIGGGVGGYMLYQEQQGTRRAATPPAEAAIPDAVQAVLPRWKLKFLEITGTSAERLTEGQQQLARDERFAYAEAEESFQQALLLDPRSDAAIAGYVQALALGRGARMDEATFQEARGLLTAAESRSGRTAPLLLAHANLLLARSGQPEQARPLAEELLSRAELPDTQKAEAHLVLGRTWLSSSRELARSHFDSAQKLSPETKRLHYYRALAHVSGGEYSAALDTLRKRLETHPKDWDSLALTARIYQEVGEPSEVRKLYEARVKAEPGELRALLPLAMLRYQAEGNAAGAVRELRALLKNRSRYAGPEVAEVLVHLAGAERTAGATDAAVKAAEEALQLEKALPEAHLQLFLVALGRRDAEKARAQWPGFRGQLENSALEKVLEGRLLLLEKKPLEALEAFQSAVSLDARRLDAQLLAGVAAASAKRRDDAFRVLHQALQSDPLRLEPRTAMSAYWLRPRETVEGVEGAILALSEGAEDPSPLLYEGLLRYHQHQFDAADRHLRSVLEVDANNAGALAYRSLIALERGATAEARRLGERAAAAGRQHPVAHLALGMALAESRQVEPAKRALRDAFSLAPTLLSAQARLAQLESPQGKDAARDTLVKVVGLDPSYLPAKRMLYLLER
>NZ_CP012109.1|WP_002635081.1|5131294_5132839_-|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase
MLALLSVSDKRGLVPFAQGLVRLGFRLLSTGGTLEALKGAGVPVTKVSEHTQSPEILGGRVKTLHPRIHGGILGRLELDADREEMKAHGIEPISLVAVNLYPFRQTVASGASEPDVIEQIDIGGPAMVRASAKNFRHVSVVVDPDDYPAVLAELEQQKSVGEDTRRRLMRKAFAHTAAYDASISAWLSAQSGEPFPGELSLAFQKVQDLRYGENPHQRGAFYREHSSPQEPTVAFAKVLQGKELSYNNILDLDAALGLLLEFPESPAAVIIKHNTPCGVAVDGALEKAYRTARAVDEVSAFGGIVALNREVDAATAQAMAETFLEAVIAPSYSPEALQVLSGKKNLRLLEAGPALASPQARPRAQLDARSVSGGLVLMDRDAVEPPLSWKVVSKRSPTPEEERAMRFAWKVCKHVKSNAIVFASDDRLLAQGGGQTNRVDSVRIAMQRGGAALQGSAVASDAFFPFRDGLDEAARAGATCVVQPGGSVRDAELIAAADEHGMAMVLTGVRHFRH
>NZ_CP012109.1|WP_002635080.1|5132943_5133435_-|DNA-binding-protein
MSEVKQLQEEGGDQESDQAQERRRSKTMSRKEMARDLRRRRLTGQVDPEEADLLKQMDDTRPRTRADCINGPRPCNFVSCKHNLYLDVNPETGSIKLNFPDKEIWELEHTCALDVAEKGGITLEEVGEIMNLTRERIRQVETRGLMKLREATEAEPPVSARKP

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Crispr_ID: NZ_CP012109_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_11

5365447-5365662

Orphan

Consensus_repeat	Method
TCTGTCGCGCCACTGAGCCCCAANGCC	CRT

4 spacers

The CRISPR arrays of NZ_CP012109_11

>merge|NZ_CP012109|11|5365447-5365662|CRT
TCTGTCGCGCCACTGAGCTCCAAAGCCCCTTCAGGGGCGGTGCCTTCTGTCGCGCCCCTGAGCCCCAAAGCCCTTTCGGGAGCGGTGCCCGCAGTCCCCTCTGTCGCGCCACTGAGCCCCAACGCCCCTTCGGGAGCAGTGCCCTCTGTCGCGCCACCGAGCCCCCAAGCCCCTTCGGGAGCGGTACCTTCCGTCGCGGCACTGAGCCCCACTGCT

>NZ_CP012109|11|2|5365447-5365662|CRT
TCTGTCGCGCCACTGAGCTCCAAAGCC	CCTTCAGGGGCGGTGCCT
TCTGTCGCGCCCCTGAGCCCCAAAGCC	CTTTCGGGAGCGGTGCCCGCAGTCCCC
TCTGTCGCGCCACTGAGCCCCAACGCC	CCTTCGGGAGCAGTGCCC
TCTGTCGCGCCACCGAGCCCCCAAGCC	CCTTCGGGAGCGGTACCT
TCCGTCGCGGCACTGAGCCCCACTGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002634892.1\|5372492_5372777_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044890083.1\|5359573_5360143_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP012109.1\|WP_044890082.1\|5360807_5361269_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|225083
NZ_CP012109.1\|WP_002634896.1\|5367897_5368968_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	unknown	unknown	gnl\|CDD\|235422
NZ_CP012109.1\|WP_002634907.1\|5354112_5356326_+\|M4-family-metallopeptidase	unknown	unknown	gnl\|CDD\|341060
NZ_CP012109.1\|WP_002634895.1\|5369208_5371236_+\|biosynthetic-arginine-decarboxylase	unknown	unknown	gnl\|CDD\|235427
NZ_CP012109.1\|WP_002634894.1\|5371380_5371908_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002634900.1\|5361527_5362361_-\|class-II-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|238889
NZ_CP012109.1\|WP_044890142.1\|5372016_5372451_-\|OsmC-family-protein	unknown	unknown	gnl\|CDD\|376823
NZ_CP012109.1\|WP_002634898.1\|5366292_5367120_+\|DnaJ-domain-containing-protein	unknown	unknown	gnl\|CDD\|223560
NZ_CP012109.1\|WP_002634908.1\|5353191_5353911_+\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_CP012109.1\|WP_002634890.1\|5372894_5373713_+\|PHP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223686
NZ_CP012109.1\|WP_002634906.1\|5356437_5356773_-\|DUF1330-domain-containing-protein	unknown	unknown	gnl\|CDD\|377765
NZ_CP012109.1\|WP_002634902.1\|5360139_5360811_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|340411
NZ_CP012109.1\|WP_002634904.1\|5359067_5359577_-\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132912
NZ_CP012109.1\|WP_002634905.1\|5356793_5358740_-\|DUF4339-domain-containing-protein	unknown	unknown	gnl\|CDD\|379517
NZ_CP012109.1\|WP_002634888.1\|5373769_5376874_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|270916
NZ_CP012109.1\|WP_002634887.1\|5376870_5377761_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|188267
NZ_CP012109.1\|WP_044890144.1\|5362566_5364174_+\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NZ_CP012109.1\|WP_002634897.1\|5367140_5367896_+\|CvpA-family-protein	unknown	unknown	gnl\|CDD\|367140

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_044890083.1\|5359573_5360143_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	3.70389e-07
NZ_CP012109.1\|WP_044890082.1\|5360807_5361269_-\|ATP-binding-protein	gnl\|CDD\|225083	COG2172, RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms].	7.37756e-16
NZ_CP012109.1\|WP_002634896.1\|5367897_5368968_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	4.57638e-162
NZ_CP012109.1\|WP_002634907.1\|5354112_5356326_+\|M4-family-metallopeptidase	gnl\|CDD\|341060	cd09597, M4_TLP, Peptidase M4 family including thermolysin, protealysin, aureolysin, and neutral protease. This peptidase M4 family includes several endopeptidases such as thermolysin (EC 3.4.24.27), aureolysin (the extracellular metalloproteinase from Staphylococcus aureus), neutral protease from Bacillus cereus, protealysin, and bacillolysin (EC 3.4.24.28). Typically, the M4 peptidases consist of a presequence (signal sequence), a propeptide sequence, and a peptidase unit. The presequence is cleaved off during export while the propeptide has inhibitory and chaperone functions and facilitates folding. The propeptide remains attached until the peptidase is secreted and can be safely activated. All peptidases in this family bind a single catalytic zinc ion which is tetrahedrally co-ordinated by three amino acid ligands and a water molecule that forms the nucleophile on activation during catalysis. The active site is found between two sub-domains; the N-terminal domain contains the HEXXH zinc-binding motif while the helical C-terminal domain, which is unique for the family, carries the third zinc ligand. These peptidases are secreted eubacterial endopeptidases from Gram-positive or Gram-negative sources that degrade extracellular proteins and peptides for bacterial nutrition. They are selectively inhibited by Steptomyces metalloproteinase inhibitor (SMPI) as well as by phosphoramidon from Streptomyces tanashiensis. A large number of these enzymes are implicated as key factors in the pathogenesis of various diseases, including gastritis, peptic ulcer, gastric carcinoma, cholera and several types of bacterial infections, and are therefore important drug targets. Some enzymes of the family can function at extremes of temperatures, while some function in organic solvents, thus rendering them novel targets for biotechnological applications. Thermolysin is widely used as a nonspecific protease to obtain fragments for peptide sequencing. It has also been used in production of the artificial sweetener aspartame.	2.63891e-114
NZ_CP012109.1\|WP_002634895.1\|5369208_5371236_+\|biosynthetic-arginine-decarboxylase	gnl\|CDD\|235427	PRK05354, PRK05354, biosynthetic arginine decarboxylase.	0
NZ_CP012109.1\|WP_002634888.1\|5373769_5376874_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.6187e-95
NZ_CP012109.1\|WP_002634900.1\|5361527_5362361_-\|class-II-glutamine-amidotransferase	gnl\|CDD\|238889	cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type. YafJ is a glutamine amidotransferase-like protein of unknown function found in prokaryotes, eukaryotes and archaea. YafJ has a conserved structural fold similar to those of other class II glutamine amidotransferases including glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The YafJ fold is also somewhat similar to the Ntn (N-terminal nucleophile) hydrolase fold of the proteasomal alpha and beta subunits.	3.07648e-25
NZ_CP012109.1\|WP_044890142.1\|5372016_5372451_-\|OsmC-family-protein	gnl\|CDD\|376823	pfam02566, OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. This family also contains a organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation.	5.24496e-19
NZ_CP012109.1\|WP_002634898.1\|5366292_5367120_+\|DnaJ-domain-containing-protein	gnl\|CDD\|223560	COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones].	7.67758e-15
NZ_CP012109.1\|WP_002634908.1\|5353191_5353911_+\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	7.14253e-13
NZ_CP012109.1\|WP_002634890.1\|5372894_5373713_+\|PHP-domain-containing-protein	gnl\|CDD\|223686	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only].	4.19565e-48
NZ_CP012109.1\|WP_002634906.1\|5356437_5356773_-\|DUF1330-domain-containing-protein	gnl\|CDD\|377765	pfam07045, DUF1330, Domain of unknown function (DUF1330). This family consists of several hypothetical bacterial proteins of around 90 residues in length. The function of this family is unknown.	8.94993e-42
NZ_CP012109.1\|WP_002634902.1\|5360139_5360811_-\|serine/threonine-protein-kinase	gnl\|CDD\|340411	cd16934, HATPase_RsbT-like, Histidine kinase-like ATPase domain of the anti sigma-B factor Bacillus subtilis serine/threonine-protein kinase RsbT, and related domains. This family includes the histidine kinase-like ATPase (HATPase) domain of Bacillus subtilis serine/threonine-protein kinase RsbT, a component of the stressosome signaling complex of Bacillus subtilis. The stressosome is formed from multiple copies of three proteins, a sensor protein RsbR, a scaffold protein RsbS, and RsbT, and responds to environmental changes by initiating a protein partner switching cascade. Stress perception increases the phosphorylation of RsbR and RsbS, by RsbT. Subsequent dissociation of RsbT from the stressosome activates the sigma-B cascade, leading to the release of the alternative sigma factor, sigma-B.	7.17946e-20
NZ_CP012109.1\|WP_002634904.1\|5359067_5359577_-\|STAS-domain-containing-protein	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	1.43305e-34
NZ_CP012109.1\|WP_002634905.1\|5356793_5358740_-\|DUF4339-domain-containing-protein	gnl\|CDD\|379517	pfam14237, DUF4339, Domain of unknown function (DUF4339). This domain is found in bacteria, archaea and eukaryotes, and is approximately 50 amino acids in length. There are two completely conserved residues (G and W) that may be functionally important.	2.32256e-16
NZ_CP012109.1\|WP_002634887.1\|5376870_5377761_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|188267	TIGR03001, Sig-70_gmx1, RNA polymerase sigma-70 factor, Myxococcales family 1. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are found in multiple copies in the order Myxococcales. This model supercedes TIGR02233, which has now been retired.	1.36722e-90
NZ_CP012109.1\|WP_044890144.1\|5362566_5364174_+\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_CP012109.1\|WP_002634897.1\|5367140_5367896_+\|CvpA-family-protein	gnl\|CDD\|367140	pfam02674, Colicin_V, Colicin V production protein. Colicin V production protein is required in E. Coli for colicin V production from plasmid pColV-K30. This protein is coded for in the purF operon.	7.69238e-18

>NZ_CP012109.1|WP_044890144.1|5362566_5364174_+|molecular-chaperone-DnaK
MADDIAIGIDLGTSYSCVSVVQDGQPIVIPNEWGETTHASCVSFLEDGSVLVGNAAKKNIITSPEQTVYSAKRLIGRYYFSDEVKKAQAVMPYRIVEGENNSVRIAVNDHSYSLPEISALVLKEMKAVAETYLGQEVTKAVVTVPAYFNDNQRQATKDAGRIAGMEVLRILNEPTSAALAYGFGRDVNQRVVVYDLGGGTFDVSILEIGKDVFEVLATAGDTYLGGDDFDDRIMTWLADDFLARTRLDVRQNKFCLQMLKEAAEKAKIDVGQTGSADILCQGICQDADGNIMDLKGQLNQDQFNRMVMDLVQRTFKVCDEALQSARLTAADIDAVILVGGPTRLPIIRNSVKHYFQKDPLEGINPDQVVAMGAALQSHALLDSKTETFLVDVTPLSLRIGTVGGYTEKIIDKNTPVPIDRSKTFTTSRDGQEKVKIRVYQGESNRADECEMLGEFEFAGFRIGYRGEVKIEVTFEINTDGLVHVSACDTETGQKTSTSITLSSGMSEADIQQSIQANRNTRLAGHNSNDLPAVAQ
>NZ_CP012109.1|WP_002634900.1|5361527_5362361_-|class-II-glutamine-amidotransferase
MSVILAALTSDPNLLRCELHRLQGQVLLHGDSRANAVGVGSYAQDEVLLRRYASSEALTLDSLAPPHESDALLFHAGQLPVGLSLEENTQPFRSRRWLFAHQGDGQGLEPLRAALMDALPDHLRRQVRGGTPGELLFATFLKNLRDLGRTEDPRLEAELAGRVLADTAREVARAAAQAGVARTPSLNLVATNGTLLAATRFGEPPLFCTRLEGAAECELCEVTPSTPDTQPAVSAHRRRHTVVVASHLKRSAGWVELAQGHTLAVGPDLQLHELTGV
>NZ_CP012109.1|WP_044890082.1|5360807_5361269_-|ATP-binding-protein
MLSRTPMLSEVEPMFSIEVSSRSDAAVAAALSRRYAREHGLPARASAEVAVVVSELATNLVRHAGGRGWVELWREPEWLCIRSTDRGPGMADPSRLFSGREEGRPGPLPGESLGEGGAAVRRLSDSVHVANRDGGGLEVVARKRVVHEKRRQA
>NZ_CP012109.1|WP_002634902.1|5360139_5360811_-|serine/threonine-protein-kinase
MSGGPVCAGILRVLQQFMSETAARLVLRGTLEPLRLSLESATRAELPRIIEALEPATRHFVDPVRKPQLMTQLKLLLSTSPASNGVGATAAPSDVRATTYLVRTEADASHARLAAKVMCESMGGRGYECQKVATAVSELARNQISYAGGGTIHLAPQLDPKRVLRVSAEDSGQGISDLTRVLSGTYKSKTGMGLGLLGVKRLADRFDVRTGPDGTQVEFEVWL
>NZ_CP012109.1|WP_044890083.1|5359573_5360143_-|SpoIIE-family-protein-phosphatase
MRLAIAHRSRPKVGELENGDGVMVRQERSRTLCAVVDALGHGPVAARVTSEALRCLAQVDLNQDVESIVAAMHLALRSGRGAAVMVALFDGQRVHCGGVGNVELRTRGTRVPVIPTPGILGQSHRALRVTSAALLPGDRMAVFSDGLSSRLELDDTRNLSPDAACDLLMERYGRNTDDATVLVVDVETP
>NZ_CP012109.1|WP_002634904.1|5359067_5359577_-|STAS-domain-containing-protein
MSFAASAALARPERDTARIPIIPLWGNLIVPLQGDITDAQAAQLCSDVLRDIQRTRARGMVVDISGLWMVDSHLCAVLARLAASARLMGTRTVLCGMGADVALTLQSMGIELDGVETALGLEEGLSLLGIQVMGALTAEAERESAQRLADAMLGFEEVPLAKPPAGPGR
>NZ_CP012109.1|WP_002634905.1|5356793_5358740_-|DUF4339-domain-containing-protein
MAGNSGEDNANPDHRREAAPEPPDAGSSPVLDGVSDAELDAIVGQLRTDKNLRVRASAQPRYREAPQSERLHRGAGRTRASTLGEEPPREAAPPPAKQAWYIVIGGAAYGPHDLTELKGHLDRGAVGPDSLCWREGFGEWLPLGHIPELASALLPSSVPAGAPPVPAAAMGSGLPQVARTVDLAEATTERVILEPHAPVSTTPAAVPPATLAPRMDAPEPVTVPGGGAPQGAGQPVAGFSGGEAARSDSPGFAAPRTPGPVTAAPHAEPLDGAVALAARGAPPMEVAPQPVGTHAVLTDASASRDARARRKRRLGVVLAVGAVGGMSVALALGVFDGGKREGQGADAVDATPRASATPAVAEPASAEAEAVAQASPDVAAPTPSAGGAGGGTRMESDGPVASTGSLAPSVAETARRAPPEAPVGAGSSAPGLSAVSVDRGDRVPELTGTERTTRAATGGTRTSPEERVFERPTGSLSSRDVAVAFVIGKNSVAPAPEPASSARPATTVAEAAVAPRSEDDLGPDEDFDRMLSGPGPNATKREKRTVWVPPDPTAPRETLDLATVFAVVHARRSELAACGREQSAPPGEGDRAVLRLSVLPSGKVESITTETPWLRGTSLVRCMQQKIGAWTFPRHRTQGAPVVFRYEF
>NZ_CP012109.1|WP_002634906.1|5356437_5356773_-|DUF1330-domain-containing-protein
MPAYVVVEVSVHDAQTYERYKQLAPPSLEPYGGRYLVRGGPTQALEGTWQPPRFVLLEFPSVEQAQAWWSSPEYAAAKALRHESAHSIMLLVEGVPATTPVTEAPVTASAS
>NZ_CP012109.1|WP_002634907.1|5354112_5356326_+|M4-family-metallopeptidase
MTIRRTEGPKPTIRTNAASETQAKTAAKPATIAPNVIKDGFGPAAKTTELARAEKTLKPLPPAVGRLSLDSREAQSAIQTSLAHLTPNTKTSIRNPGIVGGFQFPSYTPKSVDRDELGMTHVRLDRQHEGVKVFGEQVVTHLDQQGQLKSVTGDQNDIPAGLGTQKPALSHTQVLDIALKEFNGKPDRQPHSERVIYKDPTGEYRNAYRVEVSNTDGTDEPRRMNYLVDANSGKIYEQFNTIDGFARQHGAVNGHGHSHAHGADGHDHAHGADEAHAAAPGTSAADSDIKASATPKAPINDLATVTSKINIDQDVTVDQLKLDLDIDHTFKGDLTVALTSPSGKTETIHNRTGGSADHIKGNFDLSAFKGESAKGEWTLTVKDNARRDTGTLNSWSLNITPKATQKPEEPGSQAKADDTSMYSGKVALETTKNADGTYQLEDKTRGKGIGTYDALNRERASGQTQVKDDNDVWGEATDPERNRAAVDAHFGAQATYDFLKNVLGRDSIDGSGEKLVSYVHVSNNYVNAYWDGEKMSYGDGDGKTAGPLTALDIAGHEIAHGLTERTAGLIYRGESGGLNEAMSDIIGAGVEWYAAKSNPGVSFNWTVGERAWTPTNGDDTDGLRYMDDPTKDGYSIDHYSNYPKQTAVHGSSGIANNAFKLMVEGGTNRTSGIEVKDGIGMEAGQKIFYRALAHYMTPSTTFAQARVATINAATDLYGADSAEVAKVKEGWSAVGVN
>NZ_CP012109.1|WP_002634908.1|5353191_5353911_+|CPBP-family-intramembrane-metalloprotease
MTQAMTTPWRPSAVQEAVGLWAVGFLTIVAAFLLLAGTDYPKLIATVGFLYLPLIPMRWRNEDYPDYGLSLRAWREDLRLFLVMSAVVGPVFFLGFAGFVEVLPHLPAELSRHLTPLVGEARFQPRLPPRFGEWVVDQLLVVALPEEFFYRGYLQTRLRDAWPQGRKFLGGRLGPAFWLTALLFALGHLAIFQAWRLSVFFPALIFGWMRERTGTVIGAALFHAACNLFVRFLEVSFFG
>NZ_CP012109.1|WP_002634898.1|5366292_5367120_+|DnaJ-domain-containing-protein
MSLPALVPAGATPPRPPAAPRPPAVPGVPSVAPLAATPGIPSVAPLGAGPKAPTLSVPAIPSVAPAVPPAAAVPPPPPTSADKGPGLDLQQLADLEARCAKLDQLDYFELLALERTATPADIKRAFYRESRTYHPDRFFQMDSKELKERVNELYKRVTEAYYVLRDDTKRKKYVADVTGPERAQKLRFTEASEAETKAAAKKEQEEQIGTHPKGRQFFQQAQKDADAGNWSAAERNLKMALTYEPANARYKERLAEIQKQSQDESRDKGGSFKIR
>NZ_CP012109.1|WP_002634897.1|5367140_5367896_+|CvpA-family-protein
MVIDLIILGLVLFFALIGAATGVSRQVANWAGLAVGYFASRRLGPVAGPHLAEALGSPLFLGFIVGTVLVFICTWLAVRYALGALLLRILSTGQHNENRGLDRFLGFVLGGAKMGLIAWVILSGIAFFEQHVVIAGRRVGFSPKESLSIEVARRYNLFEMTQFAPVGNLVEVSKAAGDPKRAGKLQDDPAYKALRKDPRFQRLLQDPKLKQALARGDTAALLRNDGVLQLIQDPDVVARLGAAARASERAP
>NZ_CP012109.1|WP_002634896.1|5367897_5368968_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX
MESSARREEAVLTPREIYERLDRFVIGQSGAKRAVAIAAHNHLKRLLARRLRRTSLIKKSNILLIGPTGSGKTHIARNLADILNVPFTTVDATEYTEAGYYGKDVEVMISDLLFKANHSVEDTQRGIIFIDEVDKIARRSQSARNGAGSRDIGGEGVQQSLLKLLEGREVYVPLNVTQAWNKSDFVQVDTRDILFICAGTFSDLHDYGDEGGRSMGFGADDAAKQRQRRISTRQLTEFGMLAEFLGRLPVVVQLDRLGEDDLLRVLTEPPDAIVREFRELLAMDELEVDFAAPGLREVVRYSVERGLGARGLRSILEHVMSDVMFEAPERRRHQVTVDAGFVRERLRGLDSTQLDV
>NZ_CP012109.1|WP_002634895.1|5369208_5371236_+|biosynthetic-arginine-decarboxylase
MPANAPPHRWTLADAHELYGIRNWGKPYFGINEKGHVIVHPDGPQAPNMDLKELVDEVRRRGIGLPLLIRFTDVLRHRVVHLNEAFRKAMVDQGFKGDYRGVYPIKVNQHRYVVETLIEAGKGYNYGLEAGSKPELLAVMALLENENALVICNGYKDEEYIETALFYSRLGRNVILVVEKPSELPLIAEVARRTGIVPRLGMRVKLSTRGAGKWEASGGDRSKFGLSSSELMNCISFMKDTGLLNSFELLHFHLGSQISNIRNVKNALREVGCFYVEVARQGAPLKYLDVGGGLGVDYDGSQTNFASSMNYTTEEYANDVVFGVMEACDRAGVPHPTLVSESGRAVVAHHAVLVVDVLGTSEFDPAQVPEKVDDKAPSVVRNLWSTYREVTNKNLLEAWHDAQDAKEESLTLFSLGHLSLEQRVAAENIYWATCHKIMRIAKEQGEIPEELDSLEKALSDTYFCNFSVFQSLPDSWAIDQLFPMMPIHRLAEKPTRRATLADITCDSDGKIEHFIDKREVKDALELHALNDDDYYLGIFMVGAYQEILGDLHNLFGDTHAVQVSLGPNGGYLIDNVVAGDTVTEVLNYVSYTKDDLVAKLRKFTEAALRQGRITLDESRNLLRMYEDGLSGYTYLEREVDASFGGSASQLRLVPTPDATARPASSPPGASGTSGS
>NZ_CP012109.1|WP_002634894.1|5371380_5371908_-|hypothetical-protein
MHAKRLGIYLNDHLAGSVGGVELAVRTEAENHGNLLGRYLATLIPELKEDQATLVSVMEALELKRDGLKTRAAWAVEKVSRLKLNGTLVRYSPLSRLLELEGLCAATEGRLSLWRTLARVSVKDPRLARFPFESLVQRGEAQRSVLQRLRAQAADVAFSEEPLPFGSGEPLIAGH
>NZ_CP012109.1|WP_044890142.1|5372016_5372451_-|OsmC-family-protein
MSQTQTPATGVVMTLVSQPQFKTQLTHGPSSTVSHTEAPRDNGGTGGSFSPTDMVGAALMSCAVTTMHLFASREGISLGEVRARVEKRMTPPPRRIGELVLDIQMPAGLSAEQRAKLETAGRECPVARSLHPDVKLPIAFSYPD
>NZ_CP012109.1|WP_002634892.1|5372492_5372777_-|hypothetical-protein
MGKKTDTTIENRVYLFESLASSYVASATDVLSSEDPAVRQRARRALAELAFVSCVLADTSHLPAEQVRAQVLGAPERVPESPTKVSGGARKRNK
>NZ_CP012109.1|WP_002634890.1|5372894_5373713_+|PHP-domain-containing-protein
MIDLHSHTTASDGQYAPTELLTRAAAAGVTVLAVTDHDTVAGLAEAAEAARAHGVELVPGIEISAFIHGRECHILGHFLRPDDEDIARFADRLRLEREQRMEALLERMRQLGYPVRMEHVLAVAGDAQLGRPHLARVLVDRGWVVDVKEAFDRFLGARGAAWVERFKLAGEDAIRLIRNAGGTATLAHPGSSRMERLEIRALAQAGLAGLEVLHEDHNPSVRQKYLALAKDLDLVPTAGSDFHGEAISADHRLGTASMPPELFAKLKSRAQA
>NZ_CP012109.1|WP_002634888.1|5373769_5376874_+|tetratricopeptide-repeat-protein
MECPSETTLSDFLEGALPDAHRTRVLVHVEGCERCQEHLALGASASEATPEPTGGPLVSAGTRLSRYVVQERIGQGAMGEVYAAHDPELDRRVALKLLRPEGRHLEELRLRLLREAQALARLAHPHVVTVHDVGVCDGCVFLALELVEGMSLAEWLETPRPWQDILRVFIDAGQGLAAAHAAGLVHRDFKPSNVLVGRDGRVRVTDFGLARPSNHLQRLRSAPPPSTAEPSLDTPLTRSGALLGTPAYMAPEQLQGHGVDARSDQFSFCVALYEALHGVRPFEGKSLEDLGRAAREGRIRPPERESKVPARIRNAVLRGLRARPEERFASVEALLTELSPRTRRVRAWVGALVASACLLGLTVGYVGAQQRQSSCEQEAQKLATLWGSERRERIRSAFLATGKPFAADAWESVATTMDSHATTWRELRTEVCRASRADASAAWQTATCLDTRLWHLSAVIDVLEKADARTVQNAPQMVAALEGLTGCRDAPELATRPQPPEVLRARVDAARRKLAEARAHMDAGNHPQALEVSTALLKDIEGLDYRPLEAEVRTLHGYAHGLAGKLPEAEEHLYQALFAAEAGRDDETVARVWNLLLWVVGDQMARVDEANRLVRHARAAVERLGRERFPNVATDLHLRMGGLLLMQGKLEEADAEYTQGLELARRTTGPSRPRVTYFLTGLGRVRSRQLRAEEALALYREAQAHAFQERQWSPEHPVLALNLNNIATELLALGRTQEALDTFQRSLSLLEAARSKDHASLAAPLNNLAGLLRREGRLEEARDHYARALAIFERVKGPDHPNTVTALGGLGMVAYDSDRLDEALAHNQQALERIQRSVGEHSPRLEMSLRNLGLIHLRAGNPALARRQLTQALSLLQKENGADSVVTCGVVRDLARVDLETRAYKAALTRCEQSLALDEAAQGKDSPDVALDLACLGEAHLGLGTPARAVPLLERARRIHARVWLDRKEAARVSFLLAKSLWERPGQEAREQVTSLLHEAETWLEAQGLRARRDCDELQTWRARNLPSVSEVRR
>NZ_CP012109.1|WP_002634887.1|5376870_5377761_+|sigma-70-family-RNA-polymerase-sigma-factor
MTASSGTLTALLLAAAPAALHDALLSSPELESLLATLLEQGREAWPTVTLEPGHVLHHVGRHLREEGTPMDALRQLNAADVYLACACAQGVPHALQLFEKHVVQKTAARLSRYPAALVDEVLQVTRQRLLLGMEGRAPKIAEYSGRGSLGGWVRIVASRIGGELQEHAGRHAPLVAAPEALEQLLSRADPERDVLQAHSKQALSESLQAALAALTERERALLRLHHLHGLTMDRIATLYAEPRSSVARHVAQARERLLKQTHRELATRLKLNGREVESLLGLVQSRLDLSLHRLMG

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Crispr_ID: NZ_CP012109_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_12

5371308-5371394

Orphan

Consensus_repeat	Method
CGCCCCGTCCCGCGCAGTGCCCCGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_12

>merge|NZ_CP012109|12|5371308-5371394|CRISPRCasFinder
CGCCCCGTCCCGCGCAGTGCCCCGCGACCAGCGGCTCGCCTGAGCCGAACGGGGCTGGGGCGCCCCGTCCCGCTCAGTGCCCCGCGA

>NZ_CP012109|12|9|5371308-5371394|CRISPRCasFinder
CGCCCCGTCCCGCGCAGTGCCCCGCGA	CCAGCGGCTCGCCTGAGCCGAACGGGGCTGGGG
CGCCCCGTCCCGCTCAGTGCCCCGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002634892.1\|5372492_5372777_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002634897.1\|5367140_5367896_+\|CvpA-family-protein	unknown	unknown	gnl\|CDD\|367140
NZ_CP012109.1\|WP_002634885.1\|5377963_5378200_+\|amphi-Trp-domain-containing-protein	unknown	unknown	gnl\|CDD\|275149
NZ_CP012109.1\|WP_044890082.1\|5360807_5361269_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|225083
NZ_CP012109.1\|WP_002634896.1\|5367897_5368968_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	unknown	unknown	gnl\|CDD\|235422
NZ_CP012109.1\|WP_044890083.1\|5359573_5360143_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP012109.1\|WP_002634895.1\|5369208_5371236_+\|biosynthetic-arginine-decarboxylase	unknown	unknown	gnl\|CDD\|235427
NZ_CP012109.1\|WP_002634888.1\|5373769_5376874_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|270916
NZ_CP012109.1\|WP_044890142.1\|5372016_5372451_-\|OsmC-family-protein	unknown	unknown	gnl\|CDD\|376823
NZ_CP012109.1\|WP_002634900.1\|5361527_5362361_-\|class-II-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|238889
NZ_CP012109.1\|WP_002634890.1\|5372894_5373713_+\|PHP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223686
NZ_CP012109.1\|WP_002634881.1\|5381042_5381411_-\|PaaI-family-thioesterase	unknown	unknown	gnl\|CDD\|239527
NZ_CP012109.1\|WP_002634902.1\|5360139_5360811_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|340411
NZ_CP012109.1\|WP_002634883.1\|5380016_5380388_+\|NADH-quinone-oxidoreductase-subunit-A	unknown	unknown	gnl\|CDD\|180638
NZ_CP012109.1\|WP_002634898.1\|5366292_5367120_+\|DnaJ-domain-containing-protein	unknown	unknown	gnl\|CDD\|223560
NZ_CP012109.1\|WP_002634882.1\|5380394_5380958_+\|NADH-quinone-oxidoreductase-subunit-B	unknown	unknown	gnl\|CDD\|173278
NZ_CP012109.1\|WP_002634887.1\|5376870_5377761_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|188267
NZ_CP012109.1\|WP_044890144.1\|5362566_5364174_+\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NZ_CP012109.1\|WP_002634884.1\|5378203_5379766_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP012109.1\|WP_002634904.1\|5359067_5359577_-\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132912

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002634897.1\|5367140_5367896_+\|CvpA-family-protein	gnl\|CDD\|367140	pfam02674, Colicin_V, Colicin V production protein. Colicin V production protein is required in E. Coli for colicin V production from plasmid pColV-K30. This protein is coded for in the purF operon.	7.69238e-18
NZ_CP012109.1\|WP_002634885.1\|5377963_5378200_+\|amphi-Trp-domain-containing-protein	gnl\|CDD\|275149	TIGR04354, conserved_hypothetical_protein, amphi-Trp domain. This domain usually comprises most of the span of bacterial or archaeal proteins with a length of about 90 amino acids. Some members, however, are extended by one or two copies of domain pfam07411 in the C-terminal region. No residue in this domain is invariant. A striking feature of this domain is a C-terminal region that alternates strongly charged with strongly hydrophobic residues and usually ends with a Trp residue, e.g. LEIEIEW or FEIKVRW, suggesting an amphipathic beta strand structure. We suggest the name amphi-Trp for this domain. Some members of this function occur regularly in genomic contexts that include putative kinases of unknown specificity related to (but distinct from) HPr kinase, a Ser-specific protein kinase. The function is unknown.	9.85095e-06
NZ_CP012109.1\|WP_044890082.1\|5360807_5361269_-\|ATP-binding-protein	gnl\|CDD\|225083	COG2172, RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms].	7.37756e-16
NZ_CP012109.1\|WP_002634896.1\|5367897_5368968_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	4.57638e-162
NZ_CP012109.1\|WP_044890083.1\|5359573_5360143_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	3.70389e-07
NZ_CP012109.1\|WP_002634895.1\|5369208_5371236_+\|biosynthetic-arginine-decarboxylase	gnl\|CDD\|235427	PRK05354, PRK05354, biosynthetic arginine decarboxylase.	0
NZ_CP012109.1\|WP_002634888.1\|5373769_5376874_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.6187e-95
NZ_CP012109.1\|WP_044890142.1\|5372016_5372451_-\|OsmC-family-protein	gnl\|CDD\|376823	pfam02566, OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. This family also contains a organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation.	5.24496e-19
NZ_CP012109.1\|WP_002634900.1\|5361527_5362361_-\|class-II-glutamine-amidotransferase	gnl\|CDD\|238889	cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type. YafJ is a glutamine amidotransferase-like protein of unknown function found in prokaryotes, eukaryotes and archaea. YafJ has a conserved structural fold similar to those of other class II glutamine amidotransferases including glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The YafJ fold is also somewhat similar to the Ntn (N-terminal nucleophile) hydrolase fold of the proteasomal alpha and beta subunits.	3.07648e-25
NZ_CP012109.1\|WP_002634890.1\|5372894_5373713_+\|PHP-domain-containing-protein	gnl\|CDD\|223686	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only].	4.19565e-48
NZ_CP012109.1\|WP_002634881.1\|5381042_5381411_-\|PaaI-family-thioesterase	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	7.66008e-11
NZ_CP012109.1\|WP_002634902.1\|5360139_5360811_-\|serine/threonine-protein-kinase	gnl\|CDD\|340411	cd16934, HATPase_RsbT-like, Histidine kinase-like ATPase domain of the anti sigma-B factor Bacillus subtilis serine/threonine-protein kinase RsbT, and related domains. This family includes the histidine kinase-like ATPase (HATPase) domain of Bacillus subtilis serine/threonine-protein kinase RsbT, a component of the stressosome signaling complex of Bacillus subtilis. The stressosome is formed from multiple copies of three proteins, a sensor protein RsbR, a scaffold protein RsbS, and RsbT, and responds to environmental changes by initiating a protein partner switching cascade. Stress perception increases the phosphorylation of RsbR and RsbS, by RsbT. Subsequent dissociation of RsbT from the stressosome activates the sigma-B cascade, leading to the release of the alternative sigma factor, sigma-B.	7.17946e-20
NZ_CP012109.1\|WP_002634883.1\|5380016_5380388_+\|NADH-quinone-oxidoreductase-subunit-A	gnl\|CDD\|180638	PRK06602, PRK06602, NADH:ubiquinone oxidoreductase subunit A; Validated.	1.2687e-41
NZ_CP012109.1\|WP_002634898.1\|5366292_5367120_+\|DnaJ-domain-containing-protein	gnl\|CDD\|223560	COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones].	7.67758e-15
NZ_CP012109.1\|WP_002634882.1\|5380394_5380958_+\|NADH-quinone-oxidoreductase-subunit-B	gnl\|CDD\|173278	PRK14817, PRK14817, NADH-quinone oxidoreductase subunit B.	8.48634e-128
NZ_CP012109.1\|WP_002634887.1\|5376870_5377761_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|188267	TIGR03001, Sig-70_gmx1, RNA polymerase sigma-70 factor, Myxococcales family 1. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are found in multiple copies in the order Myxococcales. This model supercedes TIGR02233, which has now been retired.	1.36722e-90
NZ_CP012109.1\|WP_044890144.1\|5362566_5364174_+\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_CP012109.1\|WP_002634884.1\|5378203_5379766_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.43172e-47
NZ_CP012109.1\|WP_002634904.1\|5359067_5359577_-\|STAS-domain-containing-protein	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	1.43305e-34

>NZ_CP012109.1|WP_002634895.1|5369208_5371236_+|biosynthetic-arginine-decarboxylase
MPANAPPHRWTLADAHELYGIRNWGKPYFGINEKGHVIVHPDGPQAPNMDLKELVDEVRRRGIGLPLLIRFTDVLRHRVVHLNEAFRKAMVDQGFKGDYRGVYPIKVNQHRYVVETLIEAGKGYNYGLEAGSKPELLAVMALLENENALVICNGYKDEEYIETALFYSRLGRNVILVVEKPSELPLIAEVARRTGIVPRLGMRVKLSTRGAGKWEASGGDRSKFGLSSSELMNCISFMKDTGLLNSFELLHFHLGSQISNIRNVKNALREVGCFYVEVARQGAPLKYLDVGGGLGVDYDGSQTNFASSMNYTTEEYANDVVFGVMEACDRAGVPHPTLVSESGRAVVAHHAVLVVDVLGTSEFDPAQVPEKVDDKAPSVVRNLWSTYREVTNKNLLEAWHDAQDAKEESLTLFSLGHLSLEQRVAAENIYWATCHKIMRIAKEQGEIPEELDSLEKALSDTYFCNFSVFQSLPDSWAIDQLFPMMPIHRLAEKPTRRATLADITCDSDGKIEHFIDKREVKDALELHALNDDDYYLGIFMVGAYQEILGDLHNLFGDTHAVQVSLGPNGGYLIDNVVAGDTVTEVLNYVSYTKDDLVAKLRKFTEAALRQGRITLDESRNLLRMYEDGLSGYTYLEREVDASFGGSASQLRLVPTPDATARPASSPPGASGTSGS
>NZ_CP012109.1|WP_002634896.1|5367897_5368968_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX
MESSARREEAVLTPREIYERLDRFVIGQSGAKRAVAIAAHNHLKRLLARRLRRTSLIKKSNILLIGPTGSGKTHIARNLADILNVPFTTVDATEYTEAGYYGKDVEVMISDLLFKANHSVEDTQRGIIFIDEVDKIARRSQSARNGAGSRDIGGEGVQQSLLKLLEGREVYVPLNVTQAWNKSDFVQVDTRDILFICAGTFSDLHDYGDEGGRSMGFGADDAAKQRQRRISTRQLTEFGMLAEFLGRLPVVVQLDRLGEDDLLRVLTEPPDAIVREFRELLAMDELEVDFAAPGLREVVRYSVERGLGARGLRSILEHVMSDVMFEAPERRRHQVTVDAGFVRERLRGLDSTQLDV
>NZ_CP012109.1|WP_002634897.1|5367140_5367896_+|CvpA-family-protein
MVIDLIILGLVLFFALIGAATGVSRQVANWAGLAVGYFASRRLGPVAGPHLAEALGSPLFLGFIVGTVLVFICTWLAVRYALGALLLRILSTGQHNENRGLDRFLGFVLGGAKMGLIAWVILSGIAFFEQHVVIAGRRVGFSPKESLSIEVARRYNLFEMTQFAPVGNLVEVSKAAGDPKRAGKLQDDPAYKALRKDPRFQRLLQDPKLKQALARGDTAALLRNDGVLQLIQDPDVVARLGAAARASERAP
>NZ_CP012109.1|WP_002634898.1|5366292_5367120_+|DnaJ-domain-containing-protein
MSLPALVPAGATPPRPPAAPRPPAVPGVPSVAPLAATPGIPSVAPLGAGPKAPTLSVPAIPSVAPAVPPAAAVPPPPPTSADKGPGLDLQQLADLEARCAKLDQLDYFELLALERTATPADIKRAFYRESRTYHPDRFFQMDSKELKERVNELYKRVTEAYYVLRDDTKRKKYVADVTGPERAQKLRFTEASEAETKAAAKKEQEEQIGTHPKGRQFFQQAQKDADAGNWSAAERNLKMALTYEPANARYKERLAEIQKQSQDESRDKGGSFKIR
>NZ_CP012109.1|WP_044890144.1|5362566_5364174_+|molecular-chaperone-DnaK
MADDIAIGIDLGTSYSCVSVVQDGQPIVIPNEWGETTHASCVSFLEDGSVLVGNAAKKNIITSPEQTVYSAKRLIGRYYFSDEVKKAQAVMPYRIVEGENNSVRIAVNDHSYSLPEISALVLKEMKAVAETYLGQEVTKAVVTVPAYFNDNQRQATKDAGRIAGMEVLRILNEPTSAALAYGFGRDVNQRVVVYDLGGGTFDVSILEIGKDVFEVLATAGDTYLGGDDFDDRIMTWLADDFLARTRLDVRQNKFCLQMLKEAAEKAKIDVGQTGSADILCQGICQDADGNIMDLKGQLNQDQFNRMVMDLVQRTFKVCDEALQSARLTAADIDAVILVGGPTRLPIIRNSVKHYFQKDPLEGINPDQVVAMGAALQSHALLDSKTETFLVDVTPLSLRIGTVGGYTEKIIDKNTPVPIDRSKTFTTSRDGQEKVKIRVYQGESNRADECEMLGEFEFAGFRIGYRGEVKIEVTFEINTDGLVHVSACDTETGQKTSTSITLSSGMSEADIQQSIQANRNTRLAGHNSNDLPAVAQ
>NZ_CP012109.1|WP_002634900.1|5361527_5362361_-|class-II-glutamine-amidotransferase
MSVILAALTSDPNLLRCELHRLQGQVLLHGDSRANAVGVGSYAQDEVLLRRYASSEALTLDSLAPPHESDALLFHAGQLPVGLSLEENTQPFRSRRWLFAHQGDGQGLEPLRAALMDALPDHLRRQVRGGTPGELLFATFLKNLRDLGRTEDPRLEAELAGRVLADTAREVARAAAQAGVARTPSLNLVATNGTLLAATRFGEPPLFCTRLEGAAECELCEVTPSTPDTQPAVSAHRRRHTVVVASHLKRSAGWVELAQGHTLAVGPDLQLHELTGV
>NZ_CP012109.1|WP_044890082.1|5360807_5361269_-|ATP-binding-protein
MLSRTPMLSEVEPMFSIEVSSRSDAAVAAALSRRYAREHGLPARASAEVAVVVSELATNLVRHAGGRGWVELWREPEWLCIRSTDRGPGMADPSRLFSGREEGRPGPLPGESLGEGGAAVRRLSDSVHVANRDGGGLEVVARKRVVHEKRRQA
>NZ_CP012109.1|WP_002634902.1|5360139_5360811_-|serine/threonine-protein-kinase
MSGGPVCAGILRVLQQFMSETAARLVLRGTLEPLRLSLESATRAELPRIIEALEPATRHFVDPVRKPQLMTQLKLLLSTSPASNGVGATAAPSDVRATTYLVRTEADASHARLAAKVMCESMGGRGYECQKVATAVSELARNQISYAGGGTIHLAPQLDPKRVLRVSAEDSGQGISDLTRVLSGTYKSKTGMGLGLLGVKRLADRFDVRTGPDGTQVEFEVWL
>NZ_CP012109.1|WP_044890083.1|5359573_5360143_-|SpoIIE-family-protein-phosphatase
MRLAIAHRSRPKVGELENGDGVMVRQERSRTLCAVVDALGHGPVAARVTSEALRCLAQVDLNQDVESIVAAMHLALRSGRGAAVMVALFDGQRVHCGGVGNVELRTRGTRVPVIPTPGILGQSHRALRVTSAALLPGDRMAVFSDGLSSRLELDDTRNLSPDAACDLLMERYGRNTDDATVLVVDVETP
>NZ_CP012109.1|WP_002634904.1|5359067_5359577_-|STAS-domain-containing-protein
MSFAASAALARPERDTARIPIIPLWGNLIVPLQGDITDAQAAQLCSDVLRDIQRTRARGMVVDISGLWMVDSHLCAVLARLAASARLMGTRTVLCGMGADVALTLQSMGIELDGVETALGLEEGLSLLGIQVMGALTAEAERESAQRLADAMLGFEEVPLAKPPAGPGR
>NZ_CP012109.1|WP_044890142.1|5372016_5372451_-|OsmC-family-protein
MSQTQTPATGVVMTLVSQPQFKTQLTHGPSSTVSHTEAPRDNGGTGGSFSPTDMVGAALMSCAVTTMHLFASREGISLGEVRARVEKRMTPPPRRIGELVLDIQMPAGLSAEQRAKLETAGRECPVARSLHPDVKLPIAFSYPD
>NZ_CP012109.1|WP_002634892.1|5372492_5372777_-|hypothetical-protein
MGKKTDTTIENRVYLFESLASSYVASATDVLSSEDPAVRQRARRALAELAFVSCVLADTSHLPAEQVRAQVLGAPERVPESPTKVSGGARKRNK
>NZ_CP012109.1|WP_002634890.1|5372894_5373713_+|PHP-domain-containing-protein
MIDLHSHTTASDGQYAPTELLTRAAAAGVTVLAVTDHDTVAGLAEAAEAARAHGVELVPGIEISAFIHGRECHILGHFLRPDDEDIARFADRLRLEREQRMEALLERMRQLGYPVRMEHVLAVAGDAQLGRPHLARVLVDRGWVVDVKEAFDRFLGARGAAWVERFKLAGEDAIRLIRNAGGTATLAHPGSSRMERLEIRALAQAGLAGLEVLHEDHNPSVRQKYLALAKDLDLVPTAGSDFHGEAISADHRLGTASMPPELFAKLKSRAQA
>NZ_CP012109.1|WP_002634888.1|5373769_5376874_+|tetratricopeptide-repeat-protein
MECPSETTLSDFLEGALPDAHRTRVLVHVEGCERCQEHLALGASASEATPEPTGGPLVSAGTRLSRYVVQERIGQGAMGEVYAAHDPELDRRVALKLLRPEGRHLEELRLRLLREAQALARLAHPHVVTVHDVGVCDGCVFLALELVEGMSLAEWLETPRPWQDILRVFIDAGQGLAAAHAAGLVHRDFKPSNVLVGRDGRVRVTDFGLARPSNHLQRLRSAPPPSTAEPSLDTPLTRSGALLGTPAYMAPEQLQGHGVDARSDQFSFCVALYEALHGVRPFEGKSLEDLGRAAREGRIRPPERESKVPARIRNAVLRGLRARPEERFASVEALLTELSPRTRRVRAWVGALVASACLLGLTVGYVGAQQRQSSCEQEAQKLATLWGSERRERIRSAFLATGKPFAADAWESVATTMDSHATTWRELRTEVCRASRADASAAWQTATCLDTRLWHLSAVIDVLEKADARTVQNAPQMVAALEGLTGCRDAPELATRPQPPEVLRARVDAARRKLAEARAHMDAGNHPQALEVSTALLKDIEGLDYRPLEAEVRTLHGYAHGLAGKLPEAEEHLYQALFAAEAGRDDETVARVWNLLLWVVGDQMARVDEANRLVRHARAAVERLGRERFPNVATDLHLRMGGLLLMQGKLEEADAEYTQGLELARRTTGPSRPRVTYFLTGLGRVRSRQLRAEEALALYREAQAHAFQERQWSPEHPVLALNLNNIATELLALGRTQEALDTFQRSLSLLEAARSKDHASLAAPLNNLAGLLRREGRLEEARDHYARALAIFERVKGPDHPNTVTALGGLGMVAYDSDRLDEALAHNQQALERIQRSVGEHSPRLEMSLRNLGLIHLRAGNPALARRQLTQALSLLQKENGADSVVTCGVVRDLARVDLETRAYKAALTRCEQSLALDEAAQGKDSPDVALDLACLGEAHLGLGTPARAVPLLERARRIHARVWLDRKEAARVSFLLAKSLWERPGQEAREQVTSLLHEAETWLEAQGLRARRDCDELQTWRARNLPSVSEVRR
>NZ_CP012109.1|WP_002634887.1|5376870_5377761_+|sigma-70-family-RNA-polymerase-sigma-factor
MTASSGTLTALLLAAAPAALHDALLSSPELESLLATLLEQGREAWPTVTLEPGHVLHHVGRHLREEGTPMDALRQLNAADVYLACACAQGVPHALQLFEKHVVQKTAARLSRYPAALVDEVLQVTRQRLLLGMEGRAPKIAEYSGRGSLGGWVRIVASRIGGELQEHAGRHAPLVAAPEALEQLLSRADPERDVLQAHSKQALSESLQAALAALTERERALLRLHHLHGLTMDRIATLYAEPRSSVARHVAQARERLLKQTHRELATRLKLNGREVESLLGLVQSRLDLSLHRLMG
>NZ_CP012109.1|WP_002634885.1|5377963_5378200_+|amphi-Trp-domain-containing-protein
MAQKKAKRADRDLEKTYPRKDFVAKLRRLADAIEAGKAFNIQVAGERLRIPADALFNIEHEREDGVDEVEFQLRWQRE
>NZ_CP012109.1|WP_002634884.1|5378203_5379766_-|methyl-accepting-chemotaxis-protein
MWGRLGLRTQVAIAVVVPCLAVVGFCIAYFPMHQREVTMELLQKRVRVVGRLMSQHPALLTADGSPESMSRVKDVLSLLEAPESVSERGGFTLRYQGLLGADGTVLHARGLIPASARSLGGVGMEGCVTASQRDEVSVRCASAERVYVAGFSVQEALTSVDDMRGAVVAGLAGALMLGLALSLFISRAIAEPVARVTEVVRDVARGDMSRGELDVPATGEVRLMAQSFNKMLGTLRGSVMEMVSRTEQLSGASRGLLGASADQEHVISQQAAYAQQIAATFEELSRTAEQISSSTEVVESSARRTHEAVAEAMAVVAQVVAGINDIRTESKGVADAIVGLNQDLQQVSKIAQVINQVAERSDLLALNAALEGTKAGEVGRGFSLVAAEMRKLAENVSASARDIARIVEKVQDSGEEAAAKARVGMATSDRGVEVAEQASSVFQRIVELARGTSEAARQITIATRQQRQSSEQAVQGARNVAELVKQGVDATGRTTRIAQDLQAVAEGLTAVTSRFKTTRN
>NZ_CP012109.1|WP_002634883.1|5380016_5380388_+|NADH-quinone-oxidoreductase-subunit-A
MTPTPLTPYLPLAVVLLLAGGMAMLIPQITTRLGPRRPSAIKATAFEAGSESSGPARQRFAVKFYVVALLFIVFDVEAVFLYPWAVNFQALGWFGYVEMLVFAVTLVVGLIYIWKKGALDWES
>NZ_CP012109.1|WP_002634882.1|5380394_5380958_+|NADH-quinone-oxidoreductase-subunit-B
MADADLGNIVTTRREESMGWLQSIVSKGLGWARKYSLFTYPYATACCGMEYMSVAASRHDISRFGAEFPRFSPRQADLLMVVGTINLKQAPILKRVYEQMAEPKWVVSFGVCASSGGFYDNYAVLQGIDRIIPVDVYIPGCPPRPEQVLDGLMLLQDKIGNQVHRIADREQPNPTAARHDLLLSMNK
>NZ_CP012109.1|WP_002634881.1|5381042_5381411_-|PaaI-family-thioesterase
MEGDAVVADWTPQAHHHAFDGVLSGGIVGTLLDCHCNWTAAYHLMRAQGADAPPCTVTAEYAITLKRPTPMAGPLQLSAKPVEIQGDRAVIEGTLTAGGKVTAICRGTFVAVKPGHPAYHRW

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Crispr_ID: NZ_CP012109_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_13

5432756-5432881

Orphan

Consensus_repeat	Method
GTGGATGACACCGTGCCCGTTGCGCATCGCGACGCCTGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_13

>merge|NZ_CP012109|13|5432756-5432881|CRISPRCasFinder
GTGGATGACACCGTGCCCGTTGCGCATCGCGACGCCTGAGTCCGGGCCGGCTGGGCGCGAGCCACGGGCGAGTGGTGCACCTGCCCGTGGATGACACCGTGCCCGTGGCGCATCGCGACGCCTGAG

>NZ_CP012109|13|10|5432756-5432881|CRISPRCasFinder
GTGGATGACACCGTGCCCGTTGCGCATCGCGACGCCTGAG	TCCGGGCCGGCTGGGCGCGAGCCACGGGCGAGTGGTGCACCTGCCC
GTGGATGACACCGTGCCCGTGGCGCATCGCGACGCCTGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002634825.1\|5440476_5442525_+\|TonB-family-protein	unknown	unknown	gnl\|CDD\|270916
NZ_CP012109.1\|WP_002634822.1\|5444260_5445148_-\|matrixin-family-metalloprotease	unknown	unknown	gnl\|CDD\|239806
NZ_CP012109.1\|WP_044890069.1\|5436108_5436492_-\|response-regulator	unknown	unknown	gnl\|CDD\|381093
NZ_CP012109.1\|WP_002634843.1\|5420165_5421287_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225138
NZ_CP012109.1\|WP_044890068.1\|5443295_5444303_-\|matrixin-family-metalloprotease	unknown	unknown	gnl\|CDD\|239806
NZ_CP012109.1\|WP_021781268.1\|5431761_5432634_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP012109.1\|WP_002634826.1\|5439664_5440231_-\|chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|366716
NZ_CP012109.1\|WP_002634831.1\|5432960_5435510_-\|response-regulator	unknown	unknown	gnl\|CDD\|223716
NZ_CP012109.1\|WP_002634824.1\|5442565_5443285_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319796
NZ_CP012109.1\|WP_044890073.1\|5424084_5425005_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|290220
NZ_CP012109.1\|WP_002634842.1\|5421326_5422412_-\|DUF4388-domain-containing-protein	unknown	unknown	gnl\|CDD\|373017
NZ_CP012109.1\|WP_044890072.1\|5426079_5427855_-\|TldD/PmbA-family-protein	unknown	unknown	gnl\|CDD\|223389
NZ_CP012109.1\|WP_044890070.1\|5429320_5431312_-\|alginate-lyase-family-protein	unknown	unknown	gnl\|CDD\|377945
NZ_CP012109.1\|WP_002634837.1\|5425136_5426123_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP012109.1\|WP_002634830.1\|5435519_5436104_-\|chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|223905
NZ_CP012109.1\|WP_193409873.1\|5427932_5429255_-\|nucleotide-sugar-dehydrogenase	unknown	unknown	gnl\|CDD\|223749
NZ_CP012109.1\|WP_002634839.1\|5423113_5424088_+\|metalloenzyme	unknown	unknown	gnl\|CDD\|366752
NZ_CP012109.1\|WP_002634840.1\|5422746_5423103_+\|DUF1801-domain-containing-protein	unknown	unknown	gnl\|CDD\|378058
NZ_CP012109.1\|WP_002634827.1\|5438123_5439668_-\|chemotaxis-protein-R	unknown	unknown	gnl\|CDD\|224271
NZ_CP012109.1\|WP_044890137.1\|5436488_5438102_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002634825.1\|5440476_5442525_+\|TonB-family-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.41079e-106
NZ_CP012109.1\|WP_002634822.1\|5444260_5445148_-\|matrixin-family-metalloprotease	gnl\|CDD\|239806	cd04279, ZnMc_MMP_like_1, Zinc-dependent metalloprotease; MMP_like sub-family 1. A group of bacterial, archaeal, and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin.	1.43703e-22
NZ_CP012109.1\|WP_044890069.1\|5436108_5436492_-\|response-regulator	gnl\|CDD\|381093	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains. PleD contains a REC domain (D1) with the phosphorylatable aspartate, a REC-like adaptor domain (D2), and the enzymatic diguanylate cyclase (DGC) domain, also called the GGDEF domain according to a conserved sequence motif, as its output domain. The GGDEF-containing PleD response regulators are global regulators of cell metabolism in some important human pathogens. This model describes D1 of PleD and similar domains. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.35712e-29
NZ_CP012109.1\|WP_002634843.1\|5420165_5421287_+\|hypothetical-protein	gnl\|CDD\|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	1.07519e-13
NZ_CP012109.1\|WP_044890068.1\|5443295_5444303_-\|matrixin-family-metalloprotease	gnl\|CDD\|239806	cd04279, ZnMc_MMP_like_1, Zinc-dependent metalloprotease; MMP_like sub-family 1. A group of bacterial, archaeal, and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin.	7.13844e-06
NZ_CP012109.1\|WP_021781268.1\|5431761_5432634_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.23803e-08
NZ_CP012109.1\|WP_002634826.1\|5439664_5440231_-\|chemotaxis-protein-CheW	gnl\|CDD\|366716	pfam01584, CheW, CheW-like domain. CheW proteins are part of the chemotaxis signaling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and other related proteins that are involved in chemotaxis. The CheW-like regulatory domain in CheA binds to CheW, suggesting that these domains can interact with each other.	9.99091e-16
NZ_CP012109.1\|WP_002634831.1\|5432960_5435510_-\|response-regulator	gnl\|CDD\|223716	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms].	1.96923e-127
NZ_CP012109.1\|WP_002634824.1\|5442565_5443285_-\|HAD-family-hydrolase	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.69641e-43
NZ_CP012109.1\|WP_044890073.1\|5424084_5425005_+\|hypothetical-protein	gnl\|CDD\|290220	pfam13485, Peptidase_MA_2, Peptidase MA superfamily.	0.00133363
NZ_CP012109.1\|WP_002634842.1\|5421326_5422412_-\|DUF4388-domain-containing-protein	gnl\|CDD\|373017	pfam14332, DUF4388, Domain of unknown function (DUF4388). This domain family is found in bacteria, and is typically between 102 and 135 amino acids in length.	7.58336e-11
NZ_CP012109.1\|WP_044890072.1\|5426079_5427855_-\|TldD/PmbA-family-protein	gnl\|CDD\|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	1.25094e-46
NZ_CP012109.1\|WP_044890070.1\|5429320_5431312_-\|alginate-lyase-family-protein	gnl\|CDD\|377945	pfam07940, Hepar_II_III, Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.	1.83665e-46
NZ_CP012109.1\|WP_002634837.1\|5425136_5426123_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.02098e-48
NZ_CP012109.1\|WP_002634830.1\|5435519_5436104_-\|chemotaxis-protein-CheW	gnl\|CDD\|223905	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms].	7.5701e-21
NZ_CP012109.1\|WP_193409873.1\|5427932_5429255_-\|nucleotide-sugar-dehydrogenase	gnl\|CDD\|223749	COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane].	0
NZ_CP012109.1\|WP_002634839.1\|5423113_5424088_+\|metalloenzyme	gnl\|CDD\|366752	pfam01676, Metalloenzyme, Metalloenzyme superfamily. This family includes phosphopentomutase and 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. This family is also related to pfam00245. The alignment contains the most conserved residues that are probably involved in metal binding and catalysis.	1.55724e-10
NZ_CP012109.1\|WP_002634840.1\|5422746_5423103_+\|DUF1801-domain-containing-protein	gnl\|CDD\|378058	pfam08818, DUF1801, Domain of unknown function (DU1801). This large family of bacterial proteins is uncharacterized. They contain a presumed domain about 110 amino acids in length.	8.22085e-20
NZ_CP012109.1\|WP_002634827.1\|5438123_5439668_-\|chemotaxis-protein-R	gnl\|CDD\|224271	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms].	1.97847e-63
NZ_CP012109.1\|WP_044890137.1\|5436488_5438102_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	5.7984e-57

>NZ_CP012109.1|WP_021781268.1|5431761_5432634_+|HAMP-domain-containing-histidine-kinase
MTGAASVAFYDGSVCVAETGRGAGARAPSRSRRQPALVVWPERSATRDTRVMERMSAFGAVLLAAHAREQDAAARQVQLLKTQRQLERRVANQEQRRSRASHDLRTPLMVIKGYVDMMLKGTAGGLTAPIQRYLERLKRSAEDQSAIIDRRLAKVTEVGVSDLRPLLRTAFIPAARGGRPVDTTLTLPDRPVAVPGSSDDVELLVRTLSRAVAASGAPAAVRVEAVGDAGVWQLRVSLRGGKALPEKTVTTLRYLTQRLRGGLSLPEETGNGLVVHLPVDDTVPVAHRDA
>NZ_CP012109.1|WP_044890070.1|5429320_5431312_-|alginate-lyase-family-protein
MARQALYRRRERADEVQLLQSYGAADGAELVELALGQRTSRIWCEASQRPSVLAALGAVPGGVERARARARAALRQEWDIFGTVVAFGEGRPVDWSLDPGSGHRYPVEPVERMSLAATGRDPKYPWVMGRLDSVVALGQGYWVETEADTRSRLARGFVSQVLDFLQANPLGHGVHWTCAMEVALRAANLAQALVMFSDAPEVARPEFVVPVLSALADHTAWVEAHLEDRGAVPNNHLVSNYVGLLVTGLLFPELPGAAQQLSLSVGGLREQMETQVHLEGTSFEGSIPYHRLSVELFTLAYVVARGAGVPMGPRYESRLRRMFHAVRAWCSEQGLAPQIGDNDSGRVFPLREREDNAHGYLVGLGAALFGDAGLGGGELVDEAAWLLGRAGQSRFAALASAPAPVSVSFPEGGFHILRGDGVVITVSAGKQGQGGVGGHSHNDKLSFELHLDGRPVIVDPGTGTYTREPATRNWFRSTAAHNTVQVDGEEQAPLDTARLFALPEEARARVVAFLPGKSVDRLLVRHDGYRRLAAPVGIERTFRLDRGERALAGRDRFVGTGRHDVVGRFHLPDEQARVVAPQVQVLSRAGRVMEEPVSFEPLVVELGPEGAPLAWVVLEQGLTARLVPSRYSPGYGRVVPSLAVEFRGQVTPPAWLRWVVVFR
>NZ_CP012109.1|WP_193409873.1|5427932_5429255_-|nucleotide-sugar-dehydrogenase
MMVSSPLLDRIKKRDARVGVVGLGYVGLPLGMAFAEAGFPVMGLDVDKRKIEKIEKGESYIKHIPSAPLSELSKSGKLKATSDFAKAKDMDCVIICVPTPLTASREPDMSYIIQTGEALAPHVRPGQLFILESTTYPGTTEEVLKPLLEKNGLKAGKDFYLAFSPEREDPGNKSFNTKTIPKIVGGYSPECSEVAAALYGSALKEVVPVSSTRVAELTKLLENIFRCVNIAMVNEMKMLCDRMGVDVWEAIQAASTKPFGFMPFFPGPGLGGHCIPIDPFYLTWKAREYEFHTKFIELAGEVNWQMPYYVVQRTMEALNQNKQTLNGAKVLCLGAAYKKDIDDMRESPSLRIMTLLAEKGAELSYHDPYVPELHKGHGFNMEMKSVPLKPETLGQYDAVLILTDHSDIDYAMVVDRSKVVIDTRNATKGVSKGREKVTKA
>NZ_CP012109.1|WP_044890072.1|5426079_5427855_-|TldD/PmbA-family-protein
MSAELLVTWSGWASVGDVQALLRPVFPLLAVSALLTAAAPVPDARVTLLDAMSAELSRNHQQLKMQNHEPPYFMSYQLKDYVSYAVAARYGALFMDDGYRERKLYVDVRVGDYDFDSSVEEGLEFSFSSKGTSYVSRKEGPLDDSPLALRTSLWLITDEKFKSALFQYLKKKGEDVYAVEDPKRPPSFSREKPVQHTEPPVSAPFDRERWVKVSRDVSARFNAHPELFDSEVRITQDKVTRLFVSSEGSRIITEETLYGLHVSAVTRAPDGQLLDNSRNFYSPTEAGLPDEARLVKAADTIVEELLALRAAPAIDPYTGPAILAPEAAGVLFHEAVGHRLEGDRQGGESEGKTFKGQVGKQVLPSFISIHDDPTRRVLHGEPLNGYYLFDEEGVRGQRVTLVEKGVLRNYLQGRRPVEGFLQSNGHGRSQGNLKPVARMANLLVESTNGVSDAELKKRLIAEAKRQGKPYGLIIRDITGGNTNTSSYGYQAFKGVPRMVYRVDVKTGKETLVRGVEIVGTPLSAVNRILASGQKQGVFNGFCGAESGNVPVSTVAPAMLLQELELQRTMEGKDRPPILTSPAALEAPARKP
>NZ_CP012109.1|WP_002634837.1|5425136_5426123_+|HAMP-domain-containing-histidine-kinase
MEQERPLQHPPGSVSDSRSLRERLSSSLAKLERLSAGEDVPEAVRAELASLQGLRGELETLLKHRTLSLSHLAAGLAHEINNPLAYTTGNLEYLQQRLNSHPLPASLADECQQVLDEALEGAQHIHRVVADLRALSMGDTGVERPVDLQSVLERTLRMAASQLRHRARVVRAYAPDVPRVLGTETKLGQVALNLVLNAVQALPEGRTSEHQLTLGLREEERGVVLSITDTGPGIPTEVLPHIFDPFFTTRNEGMGMGLAICRDIVTAMGGAIRVLSTPGHGTTVEITLRRAQPARPPEAPQPERPSPRRRIEHAATACAPEPPAPRGW
>NZ_CP012109.1|WP_044890073.1|5424084_5425005_+|hypothetical-protein
MNGVVTSRADILGRPGWVAALLVLGLLSGCASVRSTRVQLEPGQGAAARMPAGTSIDIEFQPRDADAAAQVRLAVERAIPRLMRWGNFDDRVTIVVHPNHAALERAANRRGHDFLRAWARYEQIEVQSPRTWTSRGASQAQVDELLLHELTHSLMYQIASDRLGWTRKRIPLWFREGMASYTAEQGYRLSSLEDLEHFWRTHPNADPLSQADALYQAESGIVYGAAHHAFTFLVRRYGEEAVKSVLQGMDRGPDFDQAFRQAVGLPPENFLQDFRRYVQLRGFKGARPLRPPQPRPARLVPLPTPQ
>NZ_CP012109.1|WP_002634839.1|5423113_5424088_+|metalloenzyme
MAAPSASRIESPAARVALLFIDGVGIGRKDPAINPLAHREHLLSHFEDAPSPPLPHSGRCIPVDTTFGVPGRPQSASNQTAILTGDPAPVLLGRHVLGYPNAPLRGLMADRSIVRRLGAAGRTATFANAYPAPYLDALGVPRRPSHSPPEFVLAPEARRKVRPSASKLAFAAGGVPLRTLDDARAGDGLTHDITGASARAYGLPAPERSPEEAAAIFWKVASGADFTFFEHYLADEAGHAQDWTAALAALDAFDAFTRAVAASRPAGARVLVCSDHGNVEDLSTRGHTLHPVPVLYFGPPAPEVESFSTVADVGRAVLSWLGAE
>NZ_CP012109.1|WP_002634840.1|5422746_5423103_+|DUF1801-domain-containing-protein
MTKIADHDAYIAAAPEPFQPALKQLRALLARVLPEAEEVVAYNMPGFKLGGSVVAGYAAFSKQCGLYLHPSAISEHAEEIAAAGLKATKTGITFSPRKPIPDDLVERLARASRKGAGA
>NZ_CP012109.1|WP_002634842.1|5421326_5422412_-|DUF4388-domain-containing-protein
MALHGDLFSYPLPEFLQWLDSSRKTGTLQLSWEAGERKLFLLSGQVGATAAEGLRGRVARLLTLSKLASGTKVLAAFDELARTPDVDAAFDIHGIQARWIRDLGREELFAAMMDLTIAGRGTFHWTEDADRSGEDWVPSDMSIRELLFESLRWVDEQSDVDKALPIDALSVRALSPPSPSQPLMHRIILGLCATPQNLGRLRLSMGVSRSSVTRRVHELLRAKLVEVDGAPQVEADPVAEMLEKGAVLMREGQFDAAGIVCTSLLASDPADRRVREFARLVQREHVAALYADLPPLSVPHMIHDPQGQALLKPEERQIAGLVNGTWDVSTLVLASPARELETLKTLAKLQRMGLLQLGYPR
>NZ_CP012109.1|WP_002634843.1|5420165_5421287_+|hypothetical-protein
MSSVNLMAREVAAKIVFYGPGLSGKTTSLRKIYETVRPAHRGEMMSIATEGDRTLFFDFLPVKVERVGDCSVRLALYTVPGQVFYNATRKLVLQGADGVVFVADSQPEAMDANRESLANLEENLFEHGIRLDRFPLVMQWNKRDLDGVLPVEVLRQELNPRGVPELETSAANGRGVLDTLKAITRLVIKDLRAKRIVPPPRPAAGAQPAGLEAQLTQHLQHRQQPGTPPQAAAQAAGPVPRVAPVVAVVPPPRVEPAPIPTPQPGPKLLGAASALAPGDMFDHARAAEAAFMTGDYSTCVTACSDAIRRALAFAGEGSLGQQAFLLRVDGADLLRLQGLSTQQHLRVDDAAFSLYVMMQVFVRLNAVGLPSAE
>NZ_CP012109.1|WP_002634831.1|5432960_5435510_-|response-regulator
MDPQLLRSIWPVFSAETREQIQAIGSKVLGLEGPVQGREPDLLPSLKRLVHSLKGSAASLGLDDIEQVVHAIEDGLAAFNHEERLPRDTVEAMLRGLSAIETAMARGDAGQSPAVDGLASLLAALGHSVPDATPEGASSGAAAQGMEVLDLLEATLSALCSPDVPDRAAVVRTAVERSRTLKASAEAAGAQKVATLAEAAALGFTRMEPGGDSAGLAASDVAGTLVALRTALEAAGGAGAVARAVHALRAAPSPTQTESPAAQQAASGAAAPQEARGASDQVVRVSLKTLESIALQVELLLAGRAQQTRRGAAHRQLMDGMREVLMHLERASSQLAMAGGGPALEPLRAGVTQMRGLQKQLLELTKESHRDGEQLALVAQVARDDLRDLRMVPSSQVLEPLRRTVRETSARLNKEVTLDLSGGDVRLDRRILDALKDPLLHLVRNAIDHGLESTEERRALGKPEAGRLSVRVEPRGSRIAVVVEDDGSGLSPERVRATAVKRGLLTSEAAEKLSDSQAARLVFQPGFSTRDQVTATSGRGVGLDVVQATAQRLQGSVDVAFTAGRGTRFTVDLPLTLAAALGLLVRTGTAVSAIPSDSVNRILRLEPGDVGTVAGRVVARLDGEQLTFLSLAEAIGLPRLPLALDSGKVQAAALLTVGEDKVLFAIDEVVGQQEIVVRSLGRHLRAVRHLAGAAVLDDGRVVPVLNAPELVRAARPETRSAATETARPRILVCDDALTTRFAMKSLLEIAGYPVVTAADGEEAWGILERTACQLVVSDWQMPRLDGVGLARRIKSHPQLHRTPIILVTSLDSPEDRAAGLEAGADGYLVKREVERGRLLEMVRQLLPAS
>NZ_CP012109.1|WP_002634830.1|5435519_5436104_-|chemotaxis-protein-CheW
MSKDDAKTDYAGLKRQLTEAHSQLDGRQAVSPEKRREVLSARARALAESRHEERQEVLSVLAFTVGGERYAVRIEHVDHVLEARGIASLPGAPRHVLGALVSRSRVVPVLDLRQLLGLEGGGMSDLSKVVVVEAGDNEEGFGLAAESVEGRKELPKVELSQPPPGPFLFLTPDRLTVLDLEQLGGPSATRPDGE
>NZ_CP012109.1|WP_044890069.1|5436108_5436492_-|response-regulator
MNARVLIVEDTKTITNLLQVYLMGWGLEFFDAPNGAQGLTKARELKPDLIISDVQMPEMDGFALCAAVRADPHLHDTPFMMLTSLKDDASRQKGKLVGASAFLNKPVSVDDLRSKVRDILKLPATRY
>NZ_CP012109.1|WP_044890137.1|5436488_5438102_-|methyl-accepting-chemotaxis-protein
MGGNVDVKETHQAPPGRAHLGRLSLRMKILALTGATGGLVAIILIVTTWMQMGGALRNDLSRRTGSVSSELVKAVTPLMAKGDLERLQEVVRGALSMGPEVAYVRVHNAEGALVSEASAERFEGEAQAPAAVEGDAAVLRQRTAKGIGLMESTAPVLSPGTTTHLGTLQVALHEEGLSTTLREATRFTAIISVLVLVVCLVAAWLVSGVLVVPLERLARAAAGIASGDLRQQIDVNGSDEIGDVARSFAVMTDALSHLLQDLRGAASEMEREAAGVLSTSTAQSAMAHQQASAINETSTTVAEIAQTSKQATSYADSVISQTQKSETLSAEGQKVVGESVAGMEKLGEQVKAIALSITDLSERTLQIGDIINTVKDVAEQSNLLALNASIEAAKAGEHGRGFAVVATEMRTLAEQSRIAAEQVRGLLNEVQKGTRQAVSTTEEGSRRAQAAMELAREAGTTILGLSDVIRESSGAARQIAGNTRQQTIGVEQISTAMGELTSAMSDAVESTRRIEQVAGNLTNLSKRFSDLVGRYQL
>NZ_CP012109.1|WP_002634827.1|5438123_5439668_-|chemotaxis-protein-R
MSEGVLDDATLGRVEEVLQTACGVTLARSLRRSLETALERAARSRGLAPDAFLRRLLVRESAAVECFIEHAVIGETYFFRHPEHLRSVARLAQSHAASCFQVWSAGCASGEEPYSIAMALLAEGMPEGRFRVLATDVSGRALQRAKEGLYGPWSLRRIEPEQEKRFLVAEGESFSVIPQVRRAVEFRRHNLAVDPPPFLGLGAIFCRNVLIYFPTELAREVLRRFVDALAPGGLLFVSPAEVPLTNGLGLEMVDAEGSVALRLPMPGEARAATTDTGLPRAGRAARGRNTVVAAAPPFVWPTPAEAGLSRSAQGTGNVVQGLAEASRVPSPLTAAAASSEHARDMASAREAHIASLPAAPVEAPSFAQPPAFVPAAAAASVQTPPLERAIDAARAGRFEEADVLAREAAKALIPEAYLLLSMVAEVRGDLNGAVEAIRKALYLEPRLALGHATLVALYRRMERREDAERARQNALRALDGLDDEHPLRGVETMTAGGLRQALAPVEQAGWHGGR
>NZ_CP012109.1|WP_002634826.1|5439664_5440231_-|chemotaxis-protein-CheW
MADTPDNSTVAQSRRLSVEERLRELETEKAQLRQELTSLAGELRLPGMYLTVDAAGTSALMDTESVQEVVRLVELEPLPGAPAHIAGTFVYRGSPAVVVDLSALLGVKREASLDAHLVVCGGGARTVAVLVDRVRDLVEAPVLVDGTPEGTAPLPWDASGLMAGLCRTPEGVRPLLRTSAVLVSPEAP
>NZ_CP012109.1|WP_002634825.1|5440476_5442525_+|TonB-family-protein
MIKGDSPNPEAPAGAGSDPLIGRTLNGRFSILEPLGIGGMGRVYRALQAPLERVVALKVLNPNFPSSRDPGFQKRFLREASLTSKLRHPNTVTVIDYGQTDDGIFYIAMEYLDGRTLAQVLGQVGPLAWSRAISITQQICRSLREAHSQGIIHRDLKPANIMLLNEHDQDLVKVLDFGLVKSVAAPQEGQISPEITQNGTFLGSPQYMAPEQARNATDARSDVYSLGIVLFQMLMGRPPFIARDHIELIFAHYKEAPPTFQQVRPDLHIPPEIEAVVRRCLEKDPARRYQTMDELLEGLREASMSAGGNSGIFKRPGGATTTGPYPSPALFSNVGNSTESGDTLAVDISVEVPQEVKRARQRTLLTGGLGGLVVAGLIAGGAVVFLSNKAEQPVTPPPEVAAAPVAAAPVAEPAAEAAPANTGKVRFKLMSQPTGARVFYRGKERGVTPFTLEIPSGQDGSVTVELTFAMEGYQMETVVTGGTGEVVLSQKLQKRRGGGGGRNIEVAAAAPEESFEEAEPVATPGGMSAPVLLAPTASPAAELPIAAAVGGATATAADPSPAKGSTTGLALPVLPTAAVASARGDVLPYNEDMPRPEMLEQGKDIVYTREAMAAKSSGVMIVRCTITQQGRVEKCRTIKSVAHMERAVLDALASRTYKPIIYKGYPVNVDYTFSMRLVAPRR
>NZ_CP012109.1|WP_002634824.1|5442565_5443285_-|HAD-family-hydrolase
MAVAFFDLDKTLIAANSGSLWIRRELELGHMTRMQALRASLWIARYHLGFVSMQDAVARAISQLAGTPAQPLQARTAVFYEERVRPLYRPGAWAVLEEHRRAGDRLVLLTASTGYLSELVARELRLDAVLCNRFEVDGNGLHTGRALGTICFGEGKRVCAEAYVREAGVALSACAFYTDSYSDLPVMEVVGRPVAVHPDHRLRSHARKRGWPVVDWGVPPGGGVPAIPPAPPVVPSTGP
>NZ_CP012109.1|WP_044890068.1|5443295_5444303_-|matrixin-family-metalloprotease
MVAAPLASRGGGAVRTGLGVVAGLLALGAQAQMSEEPVYRRTVVPGHPLCLLWPVREYVYHLDAAGSARTPGNTEVTAIEASFDSWRRLSGECSDFQFIRREDKQGPVVVGYDQTRPRENYNIITFRETSCREVAPAEDPCWDEETCGNVYQCWEHGMGTIGLTTSTFSYRDGRVLDSDIEMNASQPQGGYGFLFTTVDSPVCERGAAVDCVSTDLQNTMTHEIGHVVGLDHVFVPGATMEATAPPGEIQKRIIDPGSAEGFCSIYPRHLPPTQCFVREGAGMALKAEGRGSGCAAAPGQGVLGLGLAWAALALVRGRRRAGGQPVRAAAPGSRD
>NZ_CP012109.1|WP_002634822.1|5444260_5445148_-|matrixin-family-metalloprotease
MTPLAPFLIAMALGQTDPYVRSRVDAGDTRTQCLFWTTPRVVWNQSTFGNPDTQGETEFDAIRASFQSWQDIFARCGNLTLEEGPRVNERQVGYRRQGTNTNLVLFRTRDCNEVVPASEACWAEDTCANEFDCWDDDDNTIAITLTTYDERSGIIYDSDISFNAARFSFTTANGQTCFPPVTTNCVATDVQNTATHEVGHLIGLDHTRAPGSTMNPSAPPGEVSKRIVDSGSRDFVCDAYPKGQASQACLHPVTGVELGPKAGGCSAAGPGGALSLVGVWALWWLRRSRREEAAR

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Crispr_ID: NZ_CP012109_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_14

5722533-5722603

Orphan

Consensus_repeat	Method
CGGCCCGCATCACGCCCCATGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_14

>merge|NZ_CP012109|14|5722533-5722603|CRISPRCasFinder
CGGCCCGCATCACGCCCCATGGGTAACGGCGCCGCGCCCGGCGGTGCGCGGCCCGCATCACGCCCCACGGG

>NZ_CP012109|14|11|5722533-5722603|CRISPRCasFinder
CGGCCCGCATCACGCCCCATGGG	TAACGGCGCCGCGCCCGGCGGTGCG
CGGCCCGCATCACGCCCCACGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002640925.1\|5729140_5729365_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002638968.1\|5713712_5715515_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP012109.1\|WP_002637056.1\|5730797_5731274_-\|SycD/LcrH-family-type-III-secretion-system-chaperone	unknown	unknown	gnl\|CDD\|274197
NZ_CP012109.1\|WP_002637054.1\|5729645_5730026_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002638963.1\|5721326_5722400_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|379873
NZ_CP012109.1\|WP_002638971.1\|5709421_5710438_-\|stage-II-sporulation-protein-M	unknown	unknown	gnl\|CDD\|376676
NZ_CP012109.1\|WP_002638965.1\|5719606_5720125_-\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|379226
NZ_CP012109.1\|WP_002640921.1\|5727699_5728863_-\|DUF1521-domain-containing-protein	unknown	unknown	gnl\|CDD\|369385
NZ_CP012109.1\|WP_002637057.1\|5731278_5731758_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002638966.1\|5718834_5719641_+\|RDD-family-protein	unknown	unknown	gnl\|CDD\|377640
NZ_CP012109.1\|WP_002638973.1\|5707649_5708957_+\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP012109.1\|WP_002638969.1\|5712129_5713668_-\|bifunctional-metallophosphatase/5'-nucleotidase	unknown	unknown	gnl\|CDD\|223808
NZ_CP012109.1\|WP_144429759.1\|5708934_5709354_-\|inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|238239
NZ_CP012109.1\|WP_049872355.1\|5727130_5727703_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274197
NZ_CP012109.1\|WP_002640925.1\|5726637_5726862_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637055.1\|5730124_5730706_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP012109.1\|WP_044890033.1\|5725911_5726382_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP012109.1\|WP_044890034.1\|5715528_5718633_-\|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|237999
NZ_CP012109.1\|WP_002638962.1\|5722716_5724840_-\|type-III-secretion-system-export-apparatus-subunit-SctV	unknown	unknown	gnl\|CDD\|376386
NZ_CP012109.1\|WP_044890116.1\|5720348_5721287_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274350

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002638968.1\|5713712_5715515_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	4.86579e-05
NZ_CP012109.1\|WP_002637056.1\|5730797_5731274_-\|SycD/LcrH-family-type-III-secretion-system-chaperone	gnl\|CDD\|274197	TIGR02552, Low_calcium_response_locus_protein_H, type III secretion low calcium response chaperone LcrH/SycD. Genes in this family are found in type III secretion operons. LcrH, from Yersinia is believed to have a regulatory function in the low-calcium response of the secretion system. The same protein is also known as SycD (SYC = Specific Yop Chaperone) for its chaperone role. In Pseudomonas, where the homolog is known as PcrH, the chaperone role has been demonstrated and the regulatory role appears to be absent. ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array.	7.4534e-37
NZ_CP012109.1\|WP_002638963.1\|5721326_5722400_+\|FHA-domain-containing-protein	gnl\|CDD\|379873	pfam16697, Yop-YscD_cpl, Inner membrane component of T3SS, cytoplasmic domain. Yop-YscD-cpl is the cytoplasmic domain of Yop proteins like YscD from Proteobacteria. YscD forms part of the inner membrane component of the bacterial type III secretion injectosome apparatus.	1.87337e-28
NZ_CP012109.1\|WP_002638971.1\|5709421_5710438_-\|stage-II-sporulation-protein-M	gnl\|CDD\|376676	pfam01944, SpoIIM, Stage II sporulation protein M. SpoIIM is on e of four stage II sporulation proteins that is necessary for the forespore inside the mother-cell to be properly internalized through the breakdown of peptidoglycans trapped between the membranes of the septum separating the forespore and the mother-cell. The four proteins working in sequence are SpoIIB, pfam05036, SpoIIM, SpoIIP, pfam07454, and finally SpoIID, pfam08486. D, M and P are in a complex with each other and the complex assembles in a hierarchical manner such that M, which serves as a membrane anchor, recruits P to the septum and P, in turn, recruits D to the septum.	3.5469e-33
NZ_CP012109.1\|WP_002638965.1\|5719606_5720125_-\|outer-membrane-beta-barrel-protein	gnl\|CDD\|379226	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	0.00127931
NZ_CP012109.1\|WP_002640921.1\|5727699_5728863_-\|DUF1521-domain-containing-protein	gnl\|CDD\|369385	pfam07481, DUF1521, Domain of Unknown Function (DUF1521). This family of unknown function is found in a limited set of Bradyrhizobium proteins. There appears to be a periodic -DG- motif in it.	3.20442e-10
NZ_CP012109.1\|WP_002638966.1\|5718834_5719641_+\|RDD-family-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	4.48013e-18
NZ_CP012109.1\|WP_002638973.1\|5707649_5708957_+\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.9485e-64
NZ_CP012109.1\|WP_002638969.1\|5712129_5713668_-\|bifunctional-metallophosphatase/5'-nucleotidase	gnl\|CDD\|223808	COG0737, UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism].	5.02517e-56
NZ_CP012109.1\|WP_144429759.1\|5708934_5709354_-\|inorganic-diphosphatase	gnl\|CDD\|238239	cd00412, pyrophosphatase, Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules of orthophosphates (Pi). The reaction requires bivalent cations. The enzymes in general exist as homooligomers.	2.1947e-13
NZ_CP012109.1\|WP_049872355.1\|5727130_5727703_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|274197	TIGR02552, Low_calcium_response_locus_protein_H, type III secretion low calcium response chaperone LcrH/SycD. Genes in this family are found in type III secretion operons. LcrH, from Yersinia is believed to have a regulatory function in the low-calcium response of the secretion system. The same protein is also known as SycD (SYC = Specific Yop Chaperone) for its chaperone role. In Pseudomonas, where the homolog is known as PcrH, the chaperone role has been demonstrated and the regulatory role appears to be absent. ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array.	2.74498e-16
NZ_CP012109.1\|WP_002637055.1\|5730124_5730706_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.00262216
NZ_CP012109.1\|WP_044890033.1\|5725911_5726382_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	5.13492e-17
NZ_CP012109.1\|WP_044890034.1\|5715528_5718633_-\|cyclic-nucleotide-binding-domain-containing-protein	gnl\|CDD\|237999	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels.	1.36412e-21
NZ_CP012109.1\|WP_002638962.1\|5722716_5724840_-\|type-III-secretion-system-export-apparatus-subunit-SctV	gnl\|CDD\|376386	pfam00771, FHIPEP, FHIPEP family.	0
NZ_CP012109.1\|WP_044890116.1\|5720348_5721287_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.05656e-15

>NZ_CP012109.1|WP_002638963.1|5721326_5722400_+|FHA-domain-containing-protein
MSVRLTVTQRSEAGAAQSTEFVLDDAVITLGRDKACQVVLAQQAVSRNHARIIQEGTLFFLEDLGSAYGTQINGKPVPKGEKRLLRNGDVIAIATYDVRFDRVLEHLNSEASAEKTAFIARGMVKDAMRGLAGGGGEERYLRFMNGPREGERIELGDAKEVVLGREQKDADIVLKDDLVSRKHAKVRRDWSGTHVEDLGSRNGIKVNKKRVNRRQLKDGDELEVGATRFVYVDPTEPAEEPVQLAAEVKAPPPPSPRRQRPEPKPVEPPVEEPAPPVEEPAPPVEEPVADEPAPPPDEPVAEEPPPPVSAEYPVPDEPAQGGAMSAFKDKEKLVPLVVMGLVGLLFLVLMIAVLVGA
>NZ_CP012109.1|WP_044890116.1|5720348_5721287_+|tetratricopeptide-repeat-protein
MAKGDLTRADTFCDLGLEFSPQYADLWSNKGLIAMYSGRNEDAKKHFIKALRYNQEHLQAYQNLGAIYMQEAAYGKAHDNFRRALKVNPDNLESRYNLALSLMKMGKMDESKRELRTLLAVNPGIADAHHTLGVIAYSEGEYDAAGEHLSRATQLVQDSPLLWHDLGTALMELGRFPEAREAFGNCAQLDSSNSSCINNLALAQRKSALTDAAFKEIKDTQQAENSAPALFMLARQYREKGLVAEEESTYRKCVKLDAKYAACHYGLYELFFEAHKREHAQIACKNFLKYGTSEEFPTEYQTCERFLSDATF
>NZ_CP012109.1|WP_002638965.1|5719606_5720125_-|outer-membrane-beta-barrel-protein
MRTLLCTLGFTLALLSAAPAHAQFANRSLGVSLGYMDFNRTNGLDSSFFVGIDASLYIENGFEVVSLSKITFPRDTTDRNERRVVGLAPSVGIRYLLLEESIRPYVGSDLSYLIVFKNNVSNFVGIGPNVGVDFFVSDSVSVGARAQYNFYIALNEKTQRSLTLSLGAAAYF
>NZ_CP012109.1|WP_002638966.1|5718834_5719641_+|RDD-family-protein
MSVTTATDTLLDGTHTVLTPEYVEFRFTLAGLYSRFLAWLVDAVIVLAISTGILMAINVVMMAAPGFASALGIVIYFLVDWGYAITLETVWSGRTVGKRVMSLRVIQESGVRIGFYHAALRNLARPVDRLPVFYLVGGISALASRSQQRLGDMLAGTLVVRERRLRVPSALGATGDEGLLADPLFVARVKRLSSEEREVVLTAALRREELRMEARLRLFAALGARLQDALAMEKPAHLSDEKWALLVAAALLPPKQKARSTPPRRATA
>NZ_CP012109.1|WP_044890034.1|5715528_5718633_-|cyclic-nucleotide-binding-domain-containing-protein
MPPSDSSSWNRRLLPAAAFQFALIAGVTQLKTASNALVLSRFESQALPYLYLLGALMTAAMTLLPRSKPGSPFESPGLLTGMGGVVALGLAAALSAGQRLPALALYLFADTFSTFVSFRFWGRMAAAFDAREARRAFTALNGFAMGGGIAGGLLIQGLAEKLGTPAIVVSGALGLLVAGAIFHHLYKGLPPTPARGRPPSFLGLHYLAESPYAQVLAALGIAFAVLSSFVDYLFRLRLEGTLSEDALTALFGSLQLWIGLFCVGFQLLVAQRLLKRLGLLRYVALVPLVLAPLAGGALVTPSLWPVHLLRLVETAVSYSILPVGIQLLYAAVPDEQREGLRATVEGLLRKGGVVLAGLLLIGAGRAANGVTMAVAVVGMCAALGLLLVRLKPAYVAALGEQVGAPEEEDVALEGEEEQRLLAEALAAPTPDRVLRAVAMMEQAEVPLRPYLPALLRHPHERVLERGVSLALELEAHELAPVLERLVEEGPRRPRDQAVWALARLSPERAERLLPALLNHPDVGLRCAAIGALVKSTGSGAALEALQWMLSRGEGAPVSERREVARLLGRLQDARFAEALARYLEDADGSVRHVALVAVGKGRYAELAPRLLPFLTWREERKAAREALVALGDEVTPLVEEQLNNLVAPLAMRLQLPRVLRGIGTPAALDALLFSNVRDDASLHFRIGAQMSRLRDEHPEHPVDVERVREALGRRRDVYRNLVGAFRDLRAALGDGSLLTRAVGDRMDQALELCFFLLGLLHPSHVMRGIHYNLVGPDPRRRALALELLENLVDEEDRELVMEQVEAHHRELPPGAPGRLWRRLAALVQSEDGVLRACARHVAWVNGLHVLPQEGDMSDRTVQRMFALEGVSVFSQCDVDDIAAIAAVAREASFRAGERIYAQGDPGDALYVIVDGAVDAFHDGEHVLRFQGKQAFGEVSLLDGAPRPTDMVAAVDTRVLIIDRRDFLDLLADRPELLTGFFRAVSLQLQALIALPDSRETGERLELAAPLGPLAPPLPDGPAPDSNDDRSRDDS
>NZ_CP012109.1|WP_002638968.1|5713712_5715515_+|hypothetical-protein
MADSDTRHGGASPEGTVHKHTEQGFPGQDEVRARERAGEVRTGVRAPSLRVRKPPKGRLGQFIYGASLPFHIGGALLGDPAARKQYIRVGFLQSIAALALALSCMTSGTEAAESASKRKSRDRAQAAQVEKFATAFAERQVKKAEAKSTRRLIDLEAKTQERLKALDARIARRQQAAAGVAGGEAAALGASEAAQDAAESDTAPVPGEPAARTGTAANAPEPGATKRSADGTDTAPAPGAPEALADGTGTAPAPGAPEALEDGTDAASKPSAEESTADARIEKHIRDIEAAAQGTDAGVSLPEAIAALVLETTRGLDLDEGDTSTSSESSAEEQEAPASAPPRKADAPKRSLWTVNGFSVWSIAFWAALFAALQLAQWVIIALSRDYHDAISRKASLLTGLEPEEDDFPPRVRLNFLWLRKKLKRRWRAFLLLMVGVPALVVLAVPFMCASRYAFYVLFTAWSTWWWVVFTAAKSSRAWEPAAGAARPPWFLRVWTFLTTRMPGLRWGALQRYGASWGQRTQEVFAPISSTERHPWMFAGLATVRFLGSFPPMKFFVRPLIPVASAHLLVADVEAAKAALPPQGQAEPPAGEVPKPADVW
>NZ_CP012109.1|WP_002638969.1|5712129_5713668_-|bifunctional-metallophosphatase/5'-nucleotidase
MSTNPLRPRPFLQPLSGVLVLALGVVTGCEKSNPTPPPAAPEAKAPPPPSEVTLLVTGGAFGQLQPVEGKGGAAEMLGRWVADEKHCPGPIREGQATCADSSTLALATGDHWNGPAISSFFLGTSTAEVMGRMGYAASALGNHELAFGKDAFLKNRGAGGFPFLAANLKVKDPSLAGDLSMPAFQIFERRGLKIGVVGLASEKTVRTAMPGRAEGLEVTGYEEALNTAVPEARKAGADVVVVLADECVTDLQPAVAKHPEWKLALVAGGRCAQPVELKDGATSFVSLDRGFGKYLRAHVTFDAAKPAGEKVTALDTKVVDVAGGSPDAETAQLVGKWKSQLDEVLGQQIGFSKAGIPQSSPQMAKWVAGAVRETLGTDAAVLNSGGIRGDLPAGAVTRGSIYSVMPFENTLLVVKLKGSDLAKQLANPNALIAGFTPSGKDKFKDAKGKALDPNKEYTVATVEYLYFGGDGFEFEKLAPEPTETGMAWQTPVVEWTKLKESSEKKPIEKLLK
>NZ_CP012109.1|WP_002638971.1|5709421_5710438_-|stage-II-sporulation-protein-M
MEMAEFIESRRPRWEQLESLLDRSEVHGLRALSLEDARTLGRLYRAVSSDLLWVRARSGSADVNAYLNDLVGRAYALTYPGRRPRFSDVWGFVARGFPALMRSEWRMYVASLLMLLAGAGFGYVGMMVDPDAALYLVPAEHLNLDPIKRAADEAAGTGMTVQDQAQFTTFLFTHNIQVAFLAFALGITLGVGTALMLFVNGLFLGALAQVYAAKGMAGWFWAWILPHGIPEITAICIAGAAGLVIARGMVAPRGLPRGMAVRREAVTAVKLLFGTLTLFVLAGFIEGTVSQVHPPKLSVAFKVTFALVVGAGVYAYLLSDWLRGGGAARSDTAGAAHG
>NZ_CP012109.1|WP_144429759.1|5708934_5709354_-|inorganic-diphosphatase
MKRRADGAVDFISPLPCPYNYGSIPGLTSDEGDPLDAVVLGPRLALGQRLKVPVVGVIGFVDAGRGDPKVVCSAAPLTDAERAGLERFFRVYALFKQVLHRVRGNVPDTRFAGWLPRPATVAVTLGEDAGAGATGLRAP
>NZ_CP012109.1|WP_002638973.1|5707649_5708957_+|DUF58-domain-containing-protein
MIPTPRLWVLLALLALPMMLAGFSPGLGGAVLALDALVLALAGMDFLSARRARLEVHRVLPARLNVGVANKVVVRLIHRGGGAVQVRVRDDVPDGFDAVPDEAPLHLPAQSESRWVYRVTPGKRGRFQFGDVHLRVRGPLGLVSHERVFPAVQSIAVYPDLRGANRLLLSGAALDLVNLGLRQLRRDGRGSEFARLRDYAQGDSVREVDWKATARRGRPVTRVLESERSQSILICVDAGRSMAAQVDGLTKLDHAVNAALFLAFVAVRNGDRVGLAVFADGVKAYLPPAAGRTQYRKMVDMLYATTPSLTYVDYLALFKELNLRLTRRSLLCVFTDFLDEEQASTMVAPLHRLARRHVPLCLSVKDTALQKLLRTPPPGPEEAFQHAVASELLSDREVLKARVSQGGVQMLDVQPDELSLAAVNRYLDIKARGVL
>NZ_CP012109.1|WP_002638962.1|5722716_5724840_-|type-III-secretion-system-export-apparatus-subunit-SctV
MAATNPNSFLNKYSDIVLAVVVVAIVGMMIVPLPTLLLDVLLTLNISISVVLLLVSLYVPGALQLSVFPTLLLITTMFRLSLTISTTRLILLTGDPGEVVVAFGNFVVQGNFVVGAILFIILVIVNFIVISKGSERVAEVAARFTLDAMPGKQMSIDADLRAGSIDQDQGKKKRRDLERESQLFGAMDGAMKFVKGDAIASIIITVVNIVGGLIIGVTQKGMSAGDAAQKYTLLTIGDGLVGMIPAILISTCAGIIVTRVGGEEEGNHLGMDMGTQLTAYPKAIAIASGMLIVLGLVPGLPKIPFFLLGIGAGAGAWTMLKKQKQAVEAEDMGPAMETDLGTPMASEPAPKEALNPDSELFIPVVTPIVLEVSDALVPYVDSRQDNGRFLFELIPFMRDGLFVELGVRFPGVRARGNGSLPPGAYQVQINEVPVVTGQATLGHILVNDTVDRLRLMNIQGFEAVNPATRQPAAWVPEHHRDTLEAAGLTTWDVPGYIILHTAAVLRRNAREFVGVQETQTMLEQLEKAFPAIVKEVVPKVVNVLKLTDILQRLVEEEISIRDLRGILQALAEYGQVEADNVMLTEHVRASQRRYISHKYARGTGTLVVYLLDPNIEDAIRGSVKRTSAGAHLALEPELAQEIVQAVRSECGHLPPSAQRPVILTAMDIRRYVRKLLEYEFNPSFSVLSYQELSPELNIQPVARISTR
>NZ_CP012109.1|WP_044890033.1|5725911_5726382_-|tetratricopeptide-repeat-protein
MTTESKASVTNDDVKPLSGPEMLERATEGFNLFQDGRFRESLTLFQSLAAMDPTEAYFQTALGACHLALEDLDLAESYFNRAIELDPSDLTPFVNRGEVHLRLGKVHEAARDFNHAVGLDPEGQDPLSARARMLAAAALESAEESPASESGSDGAA
>NZ_CP012109.1|WP_002640925.1|5726637_5726862_+|hypothetical-protein
MTTATTAAAAATKALGASQGLSALEQKSLSGLTGPDRERAEAQLMLQKQQEATAFVANLMKKLNEIAMSVIGKI
>NZ_CP012109.1|WP_049872355.1|5727130_5727703_-|tetratricopeptide-repeat-protein
MSAGRTPPGQGVHRLAPLEVAVSDSVPNKGQAEKVVVPEQLAEAVIRGEIFLGQFLKLSQEQLYAWADKGYQLLQAGSSQQALQIFQGLVAASPTDAVFHAQLGAAYMTLERFDEAFESFQLALQFNDGHVDALVGRGEVHLRRGNVPEALADLSKAIQRDPGLQRRATQRAHATLRTLKQQADQVKKGR
>NZ_CP012109.1|WP_002640921.1|5727699_5728863_-|DUF1521-domain-containing-protein
MSNGIGGVGGNRQLTTAQSAGNVNTSTIARNAQLIESTLNLVEKAVDLAGKAVNVAGKALDQMSQAAPTKQAGTSGTSPAFPSERPNPLDSVRDAHSLKVDDGGKITTPGGYTIEQLGQFEWRVTGPDGKNTRVWGDPHVDESDGGKWDFKRDTSFVLGDGTRINCTCAPWGNGMTVSAQLDIVYGDSHVRVTDIDKGKGKVGQVSHDKGMDEVVRFHSKQNVDVFNMGKNAADWTFNGKEIVGHENGGEIHKVGEAVITEGHAMAFNYTAAADNPVAGEAAQNWDMNTSLPQVKPLPWDMSSGKPELNKLNETFDSISKVFDQLKNTNANGFNPFSKKDDLFGAYDKNQHRSALTQSFKALGDMFGTLEKLSKLNDMVRFRGPQSF
>NZ_CP012109.1|WP_002640925.1|5729140_5729365_+|hypothetical-protein
MTTATTAAAAATKALGASQGLSALEQKSLSGLTGPDRERAEAQLMLQKQQEATAFVANLMKKLNEIAMSVIGKI
>NZ_CP012109.1|WP_002637054.1|5729645_5730026_-|hypothetical-protein
MTTKIANNAPANGSARKSATTPQQQTQAWQGVLDSAVNQMNDPEIKGSTKYLGEGRINTVKQKVQGDMEAFIQSNPNATADEVKTQAESATKKHETNAMFQKMRDDNFFGKLMSRRKELLKDMWGE
>NZ_CP012109.1|WP_002637055.1|5730124_5730706_-|hypothetical-protein
MSNPNPDPRVPAQMPPEAPAELTGKRERLITELENQAKSAQGTLQQVMRKMSSLLSNTKPGASLNFQLYQDVKDAFSRHLNEATKTPALANMPPVLVESVEWMQAYLNARGFAADEAAAPAPAATAAPAPAAKAPAGPGGGKDAFETSSKKHASLTGDVPPPPASPPDVKAEQKDLESFKAWMKNPSLGKLKG
>NZ_CP012109.1|WP_002637056.1|5730797_5731274_-|SycD/LcrH-family-type-III-secretion-system-chaperone
MPVLDPEDPKDEAKLDALLQRWADGKATLREVRGYSDDELYAIAKTAYFFFYQGRVNEARTLFQGLYAVNPTDAYFAKALGVVEMAAGNGQGALAAFDVAAKLAPHDPSVYVGRAEVKLALGQKPQAVEDLRRAAAMQPVDDPVVRKAAAMISALSRR
>NZ_CP012109.1|WP_002637057.1|5731278_5731758_-|hypothetical-protein
MARINNPPPNTSLWPWGGPRSVRERLVDPAQIDRKKLRKTGNPKNPALASAALLDFIGPAHSSEELRLPLPPHPGGHESDLEGFSDRPHLSSVAGRGDEDQRRMMERGLGKVKAAPDRLERLKALLHRESAMLSLVDQVNEETKEIIRRMWDAQKDEGY

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Crispr_ID: NZ_CP012109_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_15

5756378-5756943

Orphan

Consensus_repeat	Method
CAGCAGGACCTCAGCGGCACGGGNACCGG	CRT

6 spacers

The CRISPR arrays of NZ_CP012109_15

>merge|NZ_CP012109|15|5756378-5756943|CRT
CAACAGGACCTCAGTGGCGCGGGCACCGGTTACATCGGCACGGTGGAGCAGCAGAACCTGAGCGGAACGAGCACCGGCGACATGGGCACGGTGCAGCAGCAGGACCTCAGTGGCTCGGGCACCGGCAACATGGGCGCGATGCAGCAGCAGAACCTGAGCGGCTCGGGCACTGGTGGCTCGGGCAGCATCGGCCAGCAGGACCTCAGCGGAACCGGCGCCGGCAACATGGGCGCAGTGCAGCAGCAGGACCTCAGTGGCTCGGGCACTGGTGGCTCGGGAAGCATCGGCCAGCAGGACCTCAGCGGCACGGGGACCGGCACTGGCACCGTCGGTCAGCAAGACATGAGCGGCACCGGCAGTTTCGGAACCACCGGCCAACAGGACCTCAGCGGCATGGGGACCGGCACTCCCAGTCAGCAGGCCCCCAGTGGAGCCGGTGGCTCCAGCAACCTCGGGCAGCAAGACCTCAGCGGCACGGGTGGCGCTGGCTCCACCGGGCAACAGGACCTCAGCGGAACAGAGACCGGAACCACCGGCCAGCAGGACCTCAGCGGCACGGGGACCGG

>NZ_CP012109|15|3|5756378-5756943|CRT
CAACAGGACCTCAGTGGCGCGGGCACCGG	TTACATCGGCACGGTGGAGCAGCAGAACCTGAGCGGAACGAGCACCGGCGACATGGGCACGGTGCAG
CAGCAGGACCTCAGTGGCTCGGGCACCGG	CAACATGGGCGCGATGCAGCAGCAGAACCTGAGCGGCTCGGGCACTGGTGGCTCGGGCAGCATCGGC
CAGCAGGACCTCAGCGGAACCGGCGCCGG	CAACATGGGCGCAGTGCAGCAGCAGGACCTCAGTGGCTCGGGCACTGGTGGCTCGGGAAGCATCGGC
CAGCAGGACCTCAGCGGCACGGGGACCGG	CACTGGCACCGTCGGTCAGCAAGACATGAGCGGCACCGGCAGTTTCGGAACCACCGGC
CAACAGGACCTCAGCGGCATGGGGACCGG	CACTCCCAGTCAGCAGGCCCCCAGTGGAGCCGGTGGCTCCAGCAACCTCGGG
CAGCAAGACCTCAGCGGCACGGGTGGCGC	TGGCTCCACCGGGCAACAGGACCTCAGCGGAACAGAGACCGGAACCACCGGC
CAGCAGGACCTCAGCGGCACGGGGACCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002637081.1\|5749887_5751996_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|226957
NZ_CP012109.1\|WP_002637080.1\|5749142_5749886_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP012109.1\|WP_002637096.1\|5776688_5776964_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637091.1\|5766868_5769244_-\|penicillin-binding-protein-1C	unknown	unknown	gnl\|CDD\|273954
NZ_CP012109.1\|WP_002637089.1\|5764151_5764622_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637074.1\|5746068_5746500_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP012109.1\|WP_021781494.1\|5758858_5760322_-\|lipoprotein	unknown	unknown	gnl\|CDD\|293789
NZ_CP012109.1\|WP_002637093.1\|5769984_5775726_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225248
NZ_CP012109.1\|WP_002637084.1\|5754085_5755696_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044890698.1\|5757755_5758850_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP012109.1\|WP_044890697.1\|5760494_5764142_+\|PD40-domain-containing-protein	unknown	unknown	gnl\|CDD\|223893
NZ_CP012109.1\|WP_002637078.1\|5747774_5748395_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044890696.1\|5764911_5766714_+\|CotH-kinase-family-protein	unknown	unknown	gnl\|CDD\|378045
NZ_CP012109.1\|WP_044890695.1\|5769277_5769961_+\|endonuclease	unknown	unknown	gnl\|CDD\|197268
NZ_CP012109.1\|WP_002637082.1\|5752000_5753302_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226957
NZ_CP012109.1\|WP_002637079.1\|5748639_5749146_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224427
NZ_CP012109.1\|WP_044890699.1\|5753306_5754089_+\|outer-membrane-lipoprotein-sorting-protein	unknown	unknown	gnl\|CDD\|379924
NZ_CP012109.1\|WP_002637095.1\|5775969_5776692_+\|rRNA-methyltransferase	unknown	unknown	gnl\|CDD\|223639
NZ_CP012109.1\|WP_002637076.1\|5747232_5747508_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637075.1\|5746527_5747094_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227244

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002637081.1\|5749887_5751996_+\|FtsX-like-permease-family-protein	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	4.64733e-22
NZ_CP012109.1\|WP_002637080.1\|5749142_5749886_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	6.34456e-105
NZ_CP012109.1\|WP_002637091.1\|5766868_5769244_-\|penicillin-binding-protein-1C	gnl\|CDD\|273954	TIGR02073, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1C. This subfamily of the penicillin binding proteins includes the member from E. coli designated penicillin-binding protein 1C. Members have both transglycosylase and transpeptidase domains and are involved in forming cross-links in the late stages of peptidoglycan biosynthesis. All members of this subfamily are presumed to have the same basic function. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_CP012109.1\|WP_002637079.1\|5748639_5749146_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|224427	COG1510, COG1510, Predicted transcriptional regulators [Transcription].	1.84668e-17
NZ_CP012109.1\|WP_002637074.1\|5746068_5746500_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.28653e-11
NZ_CP012109.1\|WP_021781494.1\|5758858_5760322_-\|lipoprotein	gnl\|CDD\|293789	sd00042, LVIVD, LVIVD repeat. LVIVD repeats are mainly found in bacterial and archaeal cell surface proteins, many of them hypothetical. Structurally, LVIVD repeats have been predicted to form a beta-propeller, with each repeat forming one four-stranded anti-parallel beta-sheet blade.	2.8951e-24
NZ_CP012109.1\|WP_002637093.1\|5769984_5775726_-\|hypothetical-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	1.14198e-165
NZ_CP012109.1\|WP_044890698.1\|5757755_5758850_-\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	2.72824e-76
NZ_CP012109.1\|WP_044890697.1\|5760494_5764142_+\|PD40-domain-containing-protein	gnl\|CDD\|223893	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion].	2.15685e-09
NZ_CP012109.1\|WP_044890695.1\|5769277_5769961_+\|endonuclease	gnl\|CDD\|197268	cd09171, PLDc_vPLD6_like, Catalytic domain of vertebrate phospholipase D6 and similar proteins. Catalytic domain of vertebrate phospholipase D6 (PLD6, EC 3.1.4.4), a homolog of the EDTA-resistant nuclease Nuc from Salmonella typhimurium, and similar proteins. PLD6 can selectively hydrolyze the terminal phosphodiester bond of phosphatidylcholine (PC) with the formation of phosphatidic acid and alcohols. Phosphatidic acid is an essential compound involved in signal transduction. It also catalyzes the transphosphatidylation of phospholipids to acceptor alcohols, by which various phospholipids can be synthesized. PLD6 belongs to the phospholipase D (PLD) superfamily. Its monomer contains a short conserved sequence motif, H-x-K-x(4)-D (where x represents any amino acid residue), termed the HKD motif, which is essential in catalysis. PLD6 is more closely related to the nuclease Nuc than to other vertebrate phospholipases, which have two copies of the HKD motif in a single polypeptide chain. Like Nuc, PLD6 may utilize a two-step mechanism to cleave phosphodiester bonds: Upon substrate binding, the bond is first attacked by a histidine residue from the HKD motif of one subunit to form a covalent phosphohistidine intermediate, which is then hydrolyzed by water with the aid of a second histidine residue from the other HKD motif in the opposite subunit.	1.36828e-70
NZ_CP012109.1\|WP_002637082.1\|5752000_5753302_+\|ABC-transporter-permease	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	5.79304e-35
NZ_CP012109.1\|WP_044890696.1\|5764911_5766714_+\|CotH-kinase-family-protein	gnl\|CDD\|378045	pfam08757, CotH, CotH kinase protein. Members of this family include the spore coat protein H (cotH). This protein is an atypical protein kinase that phosphorylates CotB and CotG.	3.12755e-91
NZ_CP012109.1\|WP_044890699.1\|5753306_5754089_+\|outer-membrane-lipoprotein-sorting-protein	gnl\|CDD\|379924	pfam17131, LolA_like, Outer membrane lipoprotein-sorting protein. This is likely to be a family of outer-membrane lipoprotein-sorting proteins.	2.15614e-45
NZ_CP012109.1\|WP_002637095.1\|5775969_5776692_+\|rRNA-methyltransferase	gnl\|CDD\|223639	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis].	2.55057e-60
NZ_CP012109.1\|WP_002637075.1\|5746527_5747094_-\|hypothetical-protein	gnl\|CDD\|227244	COG4907, COG4907, Predicted membrane protein [Function unknown].	1.16682e-06

>NZ_CP012109.1|WP_002637084.1|5754085_5755696_+|hypothetical-protein
MSSRTLTLAAALSAALAGVPALAQSDDRPDEDALFGGQEETPPEAPASSTEDSVPRDDDALFGGDGAEARPASTDPTERQPTLSDSNTGDDRDADVLNGPASRSAFDTEEVLDDPLKIGGQFYVRGFMAGSENTSLRNSAFSAPTLVDGFFDARPSDRLRGYIVGRLSYDPAQPPGTAPNALSNPRVLLDQAWLRFDIERTLFFTVGKQHVKWGTGQIWNPTDFLSPQRRDPLAFVDLRTGVSMVKMHLPWESKGWNLYGIVVMDDLGTDVGAVTDPSGSPTSQAGGNNPVNRLGRLGGALRAEVLLGPAEFGASAVAQNGRRPRFGLDVSSPLGPLDIYSEVALKKRTDRPLYRIPAGTTLEDIAQGGVQVESYVPEGLTPQVTAGATYSFSYGDNDLAVLGVEYFYNSTGYTSSFGYPYLILKDAFNPLYLGRHYGAAYVFLDRPGPLERTSFNLFTLGNLSDRSFTSRLNVTHRALTYLTVEAYGSMSYGRRGGEFRLAIDVPEGLVVDGQEIPAFNVPAPTFQLGAGLRLNL
>NZ_CP012109.1|WP_044890699.1|5753306_5754089_+|outer-membrane-lipoprotein-sorting-protein
MRLMNMLSAAALAVALLSAPAALAMEQAEQVKLLATIDDRQRNGGDYKAMVYLEQKEKGKADLVYELVVYRRDADDKLMMLFTKPKAEAGKGYLRLDKNLWNYDPNVGRWERRTERERIAGTDSRRADFDESRLAEEFDPSYEGEAKLGKYTAHVLNLKVKPNVDVAYPVLKLWVDKESGNILKQEEYALSGRKMRTALYPRWKKMFSESKKDNVWVPEEMRIYDEVEKGNSTTILIKTVDLRPLEANLFTKAWLESKSR
>NZ_CP012109.1|WP_002637082.1|5752000_5753302_+|ABC-transporter-permease
MLQLFLIAFRNLGTHRRRTLLLGGAIAGVTTLLVVLMGLSTGMKETMLRSATTLSTGHVNVAGFYKVTAGQAAPVVTAYPAVLEQIRKDVPELDYAVQRGRGWLKVVSETASIQVGVGGIDIQSEPGLRKVLQVRAGTLDGLAEPDTVLLFEKQAKRLNVQVGEAVTLAAQTMRGTSNTVDVRVVAIAADMGMLSDFGIFVPSDTLRALYQFKSDTAGALMLYLKDIQQVPVVQARLRQTLTDAGHTVMDHDPRAFFMKFETVNREAWTGQRLDITNWEDEISFITWTLTALNSLTGVLIFVLMVIIGVGIMNTLWIAIRERTREIGTLRAIGMQRTRVLLMFVFEAMLLGVLGTLAGAAIGLTLCMAINSMAVNVPEAVAVFIMSDTLNLAVHPASILGAMAFITACTTAVSLIPSFLAARLKPVTAMHHIG
>NZ_CP012109.1|WP_002637081.1|5749887_5751996_+|FtsX-like-permease-family-protein
MGHFRLLLQVAFRNLFTSKINLLIGGIIFFGTLLVVVGGALMDSMDSAMSRSIIGSIAGHIQVYSDDSKDPLALYGSMSGEPDLTALDDFSQLKPFLEKHPNVQTVVPLGTSSAIITSGNTVDLTLSRLRELYKTRDDAGETPALRENIDSVKGHVRQMVELMAEQTAKSEQELGGGNKDPAEQESLARARTDAFWDAFEQDPYGALELLENRIAPQIPDGDMLELRYAGTDLDAFQRTFDRMEIVDGQAVPTGQRGMLLSKLFYEEFLKMKSALRLDHIKQQRELNQKTIATDPELQRWVKENQTQTREIIFQLDPLKTREMVSRLQKLMGSQEAALEKLLTQFFTLDDANFDTRYTQFYAELAPLLELYRLRMGDTLTITAFTRTGYMQSANVKVYGTYQFKGLEKSAMAGALSLMDLMSFRDLYGYLTADKKAELAEIQKQSGLEALNREQAEEALFGEDSGNVLVAESASTDIDDRAAFLGAEETLKRDDLLQRVYSQQEIEQGVALSAAVMLKNPELLEQTMAELRQSGKDAGLKLRVVSWQEAAGIIGQFVLLGKLVLYFAVFIIFVVALVIINNAMMMATLQRVREVGTMRAIGAQRSFVLGMVLVETLVLGLVFGAAGSLVGSGFMAWLNSTGIPAGNEALYFFFSGPRLFPTLSASNLVAAFVIVLVVSAVSTLYPAFLATRVSPLQAMQTDE
>NZ_CP012109.1|WP_002637080.1|5749142_5749886_+|ABC-transporter-ATP-binding-protein
MNPTTPQSPIVSIANVTKDYTLGKVVVPALRGVDLEVHAGEFISIAGPSGSGKTTLLNLIGCVDTATGGVVRVAGQDTKQLTERQLTNLRLHTIGFIFQSFNLVQVLSVFQNVEFPLLLQRKLDKAQRRERVMQLLEQVGLASHAKHRPNELSGGQRQRVAVARALVTRPQLVLADEPTANLDSVTGQNIIDLMKELNQKEGTTFIFSTHDAKVMSHANAVVRLADGKFLDRISAAEASRAMASGSH
>NZ_CP012109.1|WP_002637079.1|5748639_5749146_+|MarR-family-transcriptional-regulator
MVELETAERRFIESMGQYFERRGGTRISGRIYALLMIAGKPLSNKRIATLLNVSAASVSTNLRECADMGLVEPTSVPGDRQHYYVIHSEGWEGSLRAAEDGLKSFARILGAALEVPHLSGNQNLRDASDFCAFYLTELAGIAQRWRTAQAPRAPRPAKTSKTPKGRTA
>NZ_CP012109.1|WP_002637078.1|5747774_5748395_+|hypothetical-protein
MKKLVGVFATIAMLGSGAALANNDENKPNDTAAQGGSGQVGDTQIQRDTTTIQRETTVPSEPGLGGSGTMGHQAAMGQKELNGRVVKAESDKIFVDMQGAVVPLEIDRGTTFSDPTLKKAKDLRPGQEIRASYEVKDTKNVAKSISLSGTGGAGDEALTPDSSINQDNNMGGSGLDTKHDDGTGGAGHNDGAKNPDTGSSTSPDTF
>NZ_CP012109.1|WP_002637076.1|5747232_5747508_-|hypothetical-protein
MPPTAKPSPTAQDLPAPSFPAIESLLEAASVEEVRGFFDSVKTGLTDLKGPKVEQGKKAQAAIGRAEELLGLLVETRERLIAESKGGKGRK
>NZ_CP012109.1|WP_002637075.1|5746527_5747094_-|hypothetical-protein
MAKIDNMMGPNVRLSTNVTTARQTPDTGFGARLHNGLNSAASAVGTGVGAMAGMVPGGQIVSAAVSSMHTFSSTGGSGMGAPYAGVMNTAVGGTLGGAVAPAGGGIGGGLGGGAVAGSGSPLGLGAQGNGSTTDTVNGNFSLNKMAEENSKLLNLQAAIQQESQTFTAISNVMKSRNDTIKNSIGNVR
>NZ_CP012109.1|WP_002637074.1|5746068_5746500_-|tetratricopeptide-repeat-protein
MAETSEISNSLVPLGKQQARVLLEAGYLWLDMGHFDKAKEIFSGAAALMPRSEVPQLALGAVEFSQGRHDKALQAYRVAQRLAPQSSLPRAHAGEALLFMGKVPEALKELKAAMDLEPDGDGARLAQSLIQAKEAGVLPPAKS
>NZ_CP012109.1|WP_044890698.1|5757755_5758850_-|EAL-domain-containing-protein
MSDSPARGCDRCQALPSSLEGAGRLFLWSPVGHSQGRLVSCLREARHEVQVRAEARCVVVWVPEGALSALVSNLVAALSQEEARATRALFMVGEAEPGLADYPRVGALQRFVTRTRAGWLVDLLAEQRLTTHFQPIVHAQDTGRIFAYEALMRGREPDGALVPPGRMMQTARDADLLFQLDLAARTTAIREAVTHGLDTHLFINFTPTAIYDANFCLRSTVEAIQAARIPPERVVFEIIETDQTADAEHLRGIVDFYRRSGFQVALDDLGAGFSSLNLIHRLRPDIIKLDMELVRDVHLDPYKGSIVEKLLEIARTLGIRTVAEGIETHEELRWVRAHGVDFVQGYLISRPQSPPVASTPSFTD
>NZ_CP012109.1|WP_021781494.1|5758858_5760322_-|lipoprotein
MHGGMKRLLAVTSTLALATACGNGNSSEPKAECQLEAIDLSACQLSSLAGVQPEGIWNLNINLNDGGGAAAAMRLSGGGSTTPMLMGFNATERQSTPESFFMASEFQNTSGITVRFAVAGCGSTGPGQMTGIFRRCANGNLDMRGTFEAVRTVRRAGEADATGVELISEVAMPGVMATNVSVSNGLAIVTLGAKGFEIYDVSDPSQPRKVAQHQPSSDYYSTSLLNGQTLYVGSRRNGTVVFDLSNPTKPMQLRSVPESVVEVTSLSMDGNVLYAASPAPNSEVYVYDIATPADPKQLTRYFVEGTEPLAGEVPLSVTAQGGRLYVSNWSFGMSVSDVTTPARPKLLGRFASSASRATAVGQVAGRTLAFDVGEDWGAHLSLLDVGAPATVSRVGEFRMRPDVSVRDVALSGNRVYLAYGQDGLRVVDVSVPGEPRQVGYYNTWRETDAGHGVVFLEGLNKVSVPGDGYIYATDSSRGLLIFRDTVE
>NZ_CP012109.1|WP_044890697.1|5760494_5764142_+|PD40-domain-containing-protein
MPSVNPRPLAAALVVLFLPGLALAQFYVVPRRPGKTPVNSYEFEWRHADILVGPGATGLAEPPDRTAHENPPETPGGANPGAPTTSPEEGNPVGLPPGPAPETTQITPRPESRTDLPGSPPVADAQDTDGGVPVVVPLLPAGEDGGTEDAGALVMMVDGGTDGGSVAAAGTDGGTPDAGNYLMASESDDGGTLLGGGQSVFSGADAGFNYTYAKSLGDKTGGVRFYFYERERMVAERAAPLIEEAYRYLVDQFKYVPTKTFPYILYSSYQEFLQTNLFAVSEGTLGLTSTGEDLKLTLPYLGDHRLFEEVSTHELAHQFTIQKVRTVAEQAKMFGDPLQAIPLWFIEGLAEFYAKRGMDPEAEMLVRDLLVNPDLFKGYAFLDFFSPGPYGYLWIYKVGQVRVSFLEEEYGTGFIQRVLEESPRLTGGSRDSPALKFEDLLERLTGDNPKRISARFENWLKRRAFKTYLASEQSSPALDLLDKAPGYTTAMTSSPNGNVLALRTIVPETGESRLYLMDPRMPDKTAKVTGDGVPGVESLHPISNRSFSLTNDKLAFVAEMTGRDVIYVQDYTHKVERRGADVLVRRNPIRTGIDREVGLSVELDVGGRTAYRIDRHGLLAAYSPAFSPDGRWVAFIGINDAGLRDIYAIDTQAGADAKPLQLTDDVFSEREVTWGPSGIIFTSDATSHRQFNLFRVRPDAPRQVERLTSEERDHTAPLALADGRIFFTAFHNSSSDLHELTKDGRIVRRTDLTTGLFEPGPGPDGSLWVLFHVSGERRPAVIRPPKMLALDVPVEPPPEPPSPLAVRPLTDATAYEPFTRQNLEFGPFFGFAGAGGGGFVGQLFAAASDRMKDHQFLLTLAVYGSFDLTDGFLLYINDKGRSTWGGGLFQSLRFRVDRTFENEGQASQAFFTSGERFFGVLGSLRYPLSTFFFVQGDLSVGGTKYFLDDFTEFELFFPERNAANMELLTPWNARNRAIRFQTEVSGTIGYDTLKYHYATGPLSGSAAMLETTVGVQPFNNEAYGNVRVDAERYFPIYGRANVFIRGGLGTTLGGRYARSYFLSSFDTLRGVNFGDINWLLGRHYVYSTLEVQLPLNDIIRVAFLSDMEAIAGIDAGGVGEGRDDLWNHRVVNAVAGVNLALGPLLLRLHFARPLDVGAAAGRPDPGWVTNFSLGIAGLNGFFDQANTGKSNGVAPTPMSPALMPAVGGGYTAPRH
>NZ_CP012109.1|WP_002637089.1|5764151_5764622_-|hypothetical-protein
MESWNQTSSDTVRAHAPLVVNRRIDEHVERCVRYMAEKGDRAEMSRYLERLEREWDVHRAVAVTTSALGLLGLLLGRRDGGRWRGLSTAAGALMLQHGLSGFSPLSELFRALGVRTRREIDLEKFAIKALRGDFERIPNEGGPMARANAALVAAQS
>NZ_CP012109.1|WP_044890696.1|5764911_5766714_+|CotH-kinase-family-protein
MTPSRLLLCLPLLSLWACDGTQVDRPPSIQDPPGVEEPQVPPGNGQQPPEEPPPVEPPPVDPPPVDPPPEPPPPVPEAERPFQMPAVATSVPQYELLIPEEAMRLFEADVWTPEQDGLFKANGTTYRVQVRLRGASARTFPKKSWNVKFEDGVRFEGRTSLNLVAEYADATLLAEKIAFDLLEAMRVPASKGTLVRLNVNGHYQGVFLEIEQVNKAFLRAHNFPDTDGTIYRCGWKDCEFKMVKVPYQGDWAKKTNESQPDDKLWEMVGAINHTPEPQFVSEMEKRFHLEHYLRAMVMDALMSNNYVEDSESYFIYDRAVAKWSYVPWDLNNVDSRWWYPISVEDMSQSTSNMRHPLFSFTLQDAWVEKMYEQRKLETASYPGYLPVFSNLATRVVMNPVLRERLGARLDKAMEELFVSEVMDAHIDKLHALIDPHMKDDPFMDYGRFTAGRAYLKRYVRERRAFILRELERHAQQRPTLVFEAVHPREGWVEVGNRTAAPVSLAGMVLTTQLRISLAPSPSHPPTEVRSPIGAVLPALTVAPGQRVRIHTAPLGILMPANGEIGLFDGRSVVGVKDLLFYGDLGAGKRYERGAEGWEVR
>NZ_CP012109.1|WP_002637091.1|5766868_5769244_-|penicillin-binding-protein-1C
MSRARRFKRTLSRVILAGVVLLAVVWVAAWRVPLPTRLSAPASVVMEYRDGTPAHVFLAPDERWRIPTRLERVDPDYIQALLALEDKRFFHHPGVDPLAVLRAAVRNGVTGRRVSGASTLTMQLVRVLEPRPRTFTSKVIESFRAVQLEVRLTKREVLAAYLQFVPYGRNVEGVEAASLAYFGHTAAHLSPAEISTLLAVPQNPNRRFPSEQNTARLRSARDGVARRLLDAEALPRGQGEARVSPETVLSEVHATPVPLELTPFPREAPHVAVWLRAQHPKQARLHTTLDVGTQRMVERLMRDAAVGLAQRGIHNGTAVVVDRQQAEVLALVGNFDFFDAKHGGQIAGFATPRSPGSALKPLLYAMGIDLGMVVPEQLVADVPTAYGGYAPRNFDGRFQGLVRLEYALSQSLNMPFVRLLERVGVERFLGTLRASGVTSLVQDPGFYGLSAAVGGIEMTPLELAGVYVALAGDGHAPALRLLMGEPPPGQPAQVLSPGAAWLTRRALALRDRPDFPERRRLTGMPARVHWKTGTSFGHRDAWAAGSGPRHTAVVWLGNFDHTPSVHLVGADAAGPVLFDILEGVGPRGLAQQEDETLHPPEDLAYVEVCAYSGHLPTDACVQRKHVYARRSAVPTARCPYHQHVEVDVVTGLSVGPMCREGRKTETRVYVSWPATIRRWLEDQHRRLPEPPPAAPGCEPGGARSAPAIVSPAPGQVAILIPGVPASQQEVPLEAEASHERELTWFVNGALLGTARADERLWWTPSVGSHEILVTDDRGLTAKRTLVVRLRQ
>NZ_CP012109.1|WP_044890695.1|5769277_5769961_+|endonuclease
MNAIEIDAILTAILDDRRLTPTERQALQAVLAERRAGEALLTLFRSRAFALARASMKDARSREVISWLEETVQALHAPEPVETSRMEAHFSPGDGPLNAIVHQIQTARGAIDVCVFTVTDDRITRALLDAHRRGVRMRIVSDDGKAMDPGSDVERLSDAGIPVRLDRTSAHMHHKFAVFDRLRLVTGSYNWTRSAATHNHENILVSDDARLVQPFSRAFDALWETLA
>NZ_CP012109.1|WP_002637093.1|5769984_5775726_-|hypothetical-protein
MGSQSVVTQRPPWAKRSGWLLAALLVGTTLAGCKKEEASSETPATQPPPPVTQTPAAAPDSGTTAAAQAPKPVPPETLTPVIRAVSTGDTLPDRVVIEFPRNVRPADHVVTQDTSVTFAPSVQGTLTWTSESTLTFTPADSGFAFDTKYTVTAAAVGLNSGVVKPPVEGAWSHAFSTPPFQFVRLVPRQLDIVKGRVEVEALFSGPVDIAAVRSRGAFRVGNQAVGDVKWRTVVPSRNVVAAQLTSGLLKQGRTVDFSLQAGLPAASQAKVVAPAARSAFEVRPGKRIDITRVSVEQGSNGYYLEVSCRDVDGAAPPSPRETDGYDEYYWDSRNRGCSLDEGVAADAIHLSPAVKVSVAPSRRGFRIFGDFKRGSYTLRIDAGTASVGGGMLLATFEEAVAVPARSPQLSFATTGRYLPRSAWRNLPLQHLNLDSAELTVRNVPPENLVFWMSDDYRERADERTSNVVAKRTLALKAPADTLSTTYVDVANLVPGNIRGLVEITAKQGRYEAASRILLTNLSLVAKRGGPAPGSSGVGEVWVWALGIENTEPLSGVEVTLVKKSGEAVARCTTVAADGCVLKVPAPGVDASEPFALIARDGEELTYLKYSELKTEIANSDVQGEPYRSEKAYRASLWSDRGVYRPGDTAHIAAVLRGQDDKAPAAGMPVELRVVDPRERELKKVSLKTNAAGLVSLDLPFDSFQDTGRYGVTLKVADRDVASYHLSVEEFVPERMKVEARTEKRGYLQGEEIPVGVEAAYLFGGSAEGSPVEVSCRLVPSSFKPKDNAQYTYGLWRPDGSEPRGVTLGQVKGTLDAKGQALLRCPAQGAMGALKGAAELSALASVFESGSGRSTVNSVQVPVHPETYYVGLQASTGKVKAGKPFTVKGVVVDWDGKLVTASGKAPASVDVEYLRLEEEYGYFYDENEGYERYQRHLRPLREGRSSVAVKDGRFSLDVTPGADAAGYIVRVRSGGAQTDLELEGEGRYYWWGEGSRVDQTPRPLKPTALNLLLPAKGRVGQAITVKVKAPYKGRMLFTAETDRVLASHWVAVEPGEATWTFTPSAFAPNVYISTFLVKDPHLESAEAFMPDRAFGVGSVTLEPVEYTQSVTMNVPKEVRSNDTLTVELELGAQEGPTFATVAVVDEGILSLTRFQSPDPQKQLFVKRELGVETYETLGWTLLVPPGGASRSTGGDGEGSAAGRVQPVKPVALWSGLLPVPANGKLRVPFKLPQYRGAVRVMAVTAGPQRIGRASAQVVVRDPLVLQTTLPRFLTQNDEIQVPVFVTNLSGKAQDVKVTLTAESLPVPGLVMPAVATSPLQLLGKSEGQARVEDTKSHTFVFQARAVQAVGAARLKVTVEGGGYTSHESLDVPLSPAGPRERRVQQIELAEGTTDVSQYLKGWVPTTERSTLWVTANPYARSLQHLSYLVRYPYGCVEQTTSSTRPLLYVSELVNDVDPTLTKGASVSDMVLAGINRVLSMQTSSGGFGYWPGATEPVDWGSAYATHMLLDAQKLKYPVPQDRLNDALTWMSNEVNRMEKRDSQTENAEAYMHYVLSVAGKGRKARIQKMVDALAESAKKAPLSGEKLEQDYMLKAALWLSGDRRYEKELRNPDLSPVTDVRRNDWSFYSDRRRRGFMLSTFEDLFGKDAAGEPLARMVAESLQAHRSDWYTTQELVWGITGLGKRIQGAATTFAAPVLMADGKAVTPVQDKGTRTSDRTWALARASERQGLQLEVKSKDEGKLYLILSSEGVRSDGKPRVGGEGLALSRTWRKADGTALAVGPAPVALADLVYVELAIQNTTAERVQNIALVDRLPAGWEIENARLGRGGSVDWAAPESLWSADYVNIRDDRMEVFGSLGPRETKKVIYAVRAVTAGAFTLPSAEAEAMYDPRLWAREAGQSVQVSGPWKDNLL
>NZ_CP012109.1|WP_002637095.1|5775969_5776692_+|rRNA-methyltransferase
MVLPVRFVLMRPRNAENLGAAARALKNCGLSDWVWVRPEVEDLEPARRLAVHAQDVLEAARRADSLEEAVSDCVWVVGTSSRKVDGKRRLPPRAVGEELVARAPQGPVALVFGDERSGLTNAEVERVHDLSAVPTAPEQPSINLAQAVLLYAYEVRVAMLEAAATPAGPLPAAATDAELAQVEATLENVLTAGGFLVDAQPGRTAVRDLFAPLRRSRLTRKEARLWLAALHSVRKRWPAG
>NZ_CP012109.1|WP_002637096.1|5776688_5776964_-|hypothetical-protein
MLTRIPYLSLLVPALVLAQTRGDSPVTAPIGREPMAAPSTWVWVLLLVVAAAAFAWSATRLARRHKGPPPSGPGGIGTGSSTNVPRKPRTV

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Crispr_ID: NZ_CP012109_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_16

6224734-6224822

Orphan

Consensus_repeat	Method
CGCCCTGCCCCATTCCTGGGCGGGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_16

>merge|NZ_CP012109|16|6224734-6224822|CRISPRCasFinder
CGCCCTGCCCCATTCCTGGGCGGGCGCTCTGAACACGCGGATGCGAGGCGGAGCCGAACAGGCGCCCTGCCCCATTCCCGGGCGGGCGC

>NZ_CP012109|16|12|6224734-6224822|CRISPRCasFinder
CGCCCTGCCCCATTCCTGGGCGGGCGC	TCTGAACACGCGGATGCGAGGCGGAGCCGAACAGG
CGCCCTGCCCCATTCCCGGGCGGGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002637333.1\|6226383_6226785_-\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP012109.1\|WP_002637334.1\|6224834_6226253_-\|PilT/PilU-family-type-4a-pilus-ATPase	unknown	unknown	gnl\|CDD\|225364
NZ_CP012109.1\|WP_002637344.1\|6216877_6217471_-\|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase	unknown	unknown	gnl\|CDD\|234648
NZ_CP012109.1\|WP_044890963.1\|6222652_6223429_-\|outer-membrane-protein-assembly-factor-BamD	unknown	unknown	gnl\|CDD\|274513
NZ_CP012109.1\|WP_002637329.1\|6230160_6230658_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637338.1\|6221951_6222656_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044890943.1\|6229661_6230144_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637325.1\|6234051_6235014_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637326.1\|6233216_6233798_+\|septum-formation-protein-Maf	unknown	unknown	gnl\|CDD\|376812
NZ_CP012109.1\|WP_002637341.1\|6219129_6220188_-\|selenide,-water-dikinase-SelD	unknown	unknown	gnl\|CDD\|273100
NZ_CP012109.1\|WP_002637339.1\|6221189_6221912_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP012109.1\|WP_002637342.1\|6218269_6219079_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP012109.1\|WP_002637336.1\|6223439_6223946_-\|regulatory-protein-RecX	unknown	unknown	gnl\|CDD\|234646
NZ_CP012109.1\|WP_002637332.1\|6226799_6227246_-\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_CP012109.1\|WP_002637340.1\|6220245_6221184_-\|DUF4388-domain-containing-protein	unknown	unknown	gnl\|CDD\|373017
NZ_CP012109.1\|WP_002637328.1\|6230684_6231872_-\|class-I-SAM-dependent-rRNA-methyltransferase	unknown	unknown	gnl\|CDD\|224017
NZ_CP012109.1\|WP_044890944.1\|6231877_6233110_-\|metallopeptidase-family-protein	unknown	unknown	gnl\|CDD\|240572
NZ_CP012109.1\|WP_002637343.1\|6217467_6218181_-\|ribonuclease-PH	unknown	unknown	gnl\|CDD\|178914
NZ_CP012109.1\|WP_002637335.1\|6223981_6224719_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637331.1\|6227458_6229534_-\|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl\|CDD\|273429

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002637326.1\|6233216_6233798_+\|septum-formation-protein-Maf	gnl\|CDD\|376812	pfam02545, Maf, Maf-like protein. Maf is a putative inhibitor of septum formation in eukaryotes, bacteria, and archaea.	9.15336e-64
NZ_CP012109.1\|WP_002637334.1\|6224834_6226253_-\|PilT/PilU-family-type-4a-pilus-ATPase	gnl\|CDD\|225364	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].	4.79866e-175
NZ_CP012109.1\|WP_002637344.1\|6216877_6217471_-\|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase	gnl\|CDD\|234648	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed.	2.9784e-96
NZ_CP012109.1\|WP_044890963.1\|6222652_6223429_-\|outer-membrane-protein-assembly-factor-BamD	gnl\|CDD\|274513	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO. Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). [Protein fate, Protein and peptide secretion and trafficking].	4.44736e-64
NZ_CP012109.1\|WP_002637341.1\|6219129_6220188_-\|selenide,-water-dikinase-SelD	gnl\|CDD\|273100	TIGR00476, selenide_water_dikinase, selenium donor protein. In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelD, known as selenophosphate synthetase, selenium donor protein, and selenide,water dikinase. SelD provides reduced selenium for the selenium transferase SelA. This protein itself contains selenocysteine in many species; any sequence scoring well but not aligning to the beginning of the model is likely to have a selenocysteine residue incorrectly interpreted as a stop codon upstream of the given sequence. The SelD protein also provides selenophosphate for the enzyme tRNA 2-selenouridine synthase, which catalyzes a tRNA base modification. It also contributes to selenium incorporation by selenium-dependent molybdenum hydroxylases (SDMH), in genomes with the marker TIGR03309. All genomes with SelD should make selenocysteine, selenouridine, SDMH, or some combination.	1.31632e-143
NZ_CP012109.1\|WP_002637333.1\|6226383_6226785_-\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	3.05409e-82
NZ_CP012109.1\|WP_002637342.1\|6218269_6219079_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	2.58391e-61
NZ_CP012109.1\|WP_002637336.1\|6223439_6223946_-\|regulatory-protein-RecX	gnl\|CDD\|234646	PRK00117, recX, recombination regulator RecX; Reviewed.	9.26385e-22
NZ_CP012109.1\|WP_002637332.1\|6226799_6227246_-\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	3.78172e-87
NZ_CP012109.1\|WP_002637340.1\|6220245_6221184_-\|DUF4388-domain-containing-protein	gnl\|CDD\|373017	pfam14332, DUF4388, Domain of unknown function (DUF4388). This domain family is found in bacteria, and is typically between 102 and 135 amino acids in length.	6.71426e-28
NZ_CP012109.1\|WP_002637328.1\|6230684_6231872_-\|class-I-SAM-dependent-rRNA-methyltransferase	gnl\|CDD\|224017	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only].	1.82872e-94
NZ_CP012109.1\|WP_044890944.1\|6231877_6233110_-\|metallopeptidase-family-protein	gnl\|CDD\|240572	cd12952, MMP_ACEL2062, Minimal MMP-like domain found in Acidothermus cellulolyticus hypothetical protein ACEL2062 and similar protein. The subfamily includes an uncharacterized protein from Acidothermus cellulolyticus (ACEL2062) and its homologs from bacteria. Although its biological role remains unclear, ACEL2062 contains a minimal metalloprotease (MMP)-like domain consisting of 3-stranded mixed 2-beta sheets and a HExxHxxGxxD/S (x could be any amino acid) motif. It may belong to a superfamily of bacterial zinc metallo-peptidases, which is characterized by a conserved HExxHxxGxxD motif.	3.70956e-34
NZ_CP012109.1\|WP_002637343.1\|6217467_6218181_-\|ribonuclease-PH	gnl\|CDD\|178914	PRK00173, rph, ribonuclease PH; Reviewed.	2.50446e-144
NZ_CP012109.1\|WP_002637339.1\|6221189_6221912_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.33062e-19
NZ_CP012109.1\|WP_002637331.1\|6227458_6229534_-\|UvrD-helicase-domain-containing-protein	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0

>NZ_CP012109.1|WP_002637335.1|6223981_6224719_+|hypothetical-protein
MHPVLARFLAADVARETLQKQQSGGELSAEEKAFTDAASANPKHKSVLLGVGGRVLSTDAQASLVLLAAHAAVRALAEDTTLAEPAQKAREALAEEGASPEETDAFLASILLEEAFGYEQDVDAFDGEYVKEALGEVPALAALTKEAVDALFLTFVKGAANDAERKVREGMARALFDIAWSEGPAPINPEHMEAVLDAEVVDRPEEEQEAKVQATAQLLQALSKEGLVGPIRLSRLRALLGEDDA
>NZ_CP012109.1|WP_002637336.1|6223439_6223946_-|regulatory-protein-RecX
MHPEDEGPDAVRRATDACLKLLSMRGRSRHELDQALTRKGFEAPVREAALTRVKGWGYLDDERFARERAALLLGRGRLGPAAVEHRLRAHGLEEGTAQQAIAEARDAVAFDALAAARAVLEKRGLLGRPLTAKERARAGRLLDSRGFAEDVIYRLLGEASLDPSGPEE
>NZ_CP012109.1|WP_044890963.1|6222652_6223429_-|outer-membrane-protein-assembly-factor-BamD
MRSAVAFLSAFLMFGSGCASLTQGQAGEPDYAALADENLRLGGEALENKDFFRAQKYFEYVRTKFPYQEAAREAELRLADLDFEREAFPEAKEQYQAFIKLHPTHAKVDYAAFQSAMTHVKAYPSEFFALPPSKEKDQGEIRSALVAMEEFRRQYPNSQYANDAKVHWEDARRRLASHEMYAADFYESRERWKAVVQRLEGLLRRYPGTEYEERALFNLHAAYLKLNETEKAQDTLRQVLRRLPGTPAAERAQRMLGS
>NZ_CP012109.1|WP_002637338.1|6221951_6222656_-|hypothetical-protein
MRTTQDWSRFGGGLIVLLALGGTLALFAPRILGAAAGPELEIITALKETETEGLSLGVPGAPQPLKSSKHRFARITVNVEPGGQRAEAFATLDFEGTLGETRVGTAGVERVPFVTRGGSWVPETSAAPRLQAVVTALESRRRALQAADAAAMERLAGPDTPGVGGPEWEHLQQVRARGYRAEAWYVRLERDDAVVTEHWRLQGALPARPVDTRGQRQLSLSWRGDEFLFSPSLM
>NZ_CP012109.1|WP_002637339.1|6221189_6221912_-|tetratricopeptide-repeat-protein
MEEPLKQLLTLGRGYFEKKQYAQAEQYLAKIVEQNPTFADVFNMLGIIYHDQGQFARAQRAFESALKLNPAYTEAALNLAVIYNDMGKYAEAKEVYQAALSQQKGGPGELDPYVEKKIANMYGEIGDVFASSGVWAKAIEEYRRALALCPQFVDIRLKLGNALRDAGDNAAAILEYEQVITQNPAFLPGHIQYGVALYSAGRRAEAVRVWEDVLARSPDNKSAQMYLNLVKDPGKAEQAG
>NZ_CP012109.1|WP_002637340.1|6220245_6221184_-|DUF4388-domain-containing-protein
MDTQKTYALKFISGKYQGGEFPLKADKQIVIGRSSELDMVLVEDMVSRKHARISFSDGSITIEDLGSTNGTFVNGEKVKQSRLKEGDRILIGTSILKLVHQGAEGASVDEGTARLKLEEAAAAQAARTTNKASSMTGKIEEIPLPDLLQLFHTSKKNGVLVVQRSDQEGRIYLRQGRVYYAVIGENHNLGPQKSFNRIITWEEGDFELRPAENQEFMVELDSSTEALLMDALRQLDEIKRLQPNLPTADASLVVSSPLTPPLRELAPELLDVLQLVHNYGSLNSVMDHADADDVVTAEAVVQLLKRDYIRAA
>NZ_CP012109.1|WP_002637341.1|6219129_6220188_-|selenide,-water-dikinase-SelD
MAEAKAVKSKRLTEMSHCAGCAAKLRASDLAQVLGGLKSAKASQALVGFSTNDDAAVYKLAPGMAVVETVDFFPPVVDDPFQFGAIAAANALSDIYAMGARPLFALNLVCFPDELPLKVLSKILAGGQSKADEAGIPILGGHSIRDAEPKFGMAVTGVVHPKKVLTNAGAKPGDVLFLTKPLGSGIATTAIKRGVASKELTKRALGVMTTLNRAAGEVFASGKFKVNALTDVTGYGLLGHLLEMMTAAKVRASLDLERIPLIADIPALAEEGVVPGGTKSNLDHVRKKVRFPEGLPECIQWVLADAQTNGGLLASVPARQALKALKAFEAAGVDAALIGEVQAGKPGIDVVG
>NZ_CP012109.1|WP_002637342.1|6218269_6219079_-|N-acetylmuramoyl-L-alanine-amidase
MPSPRRPLLGLLSLLWLVPVIAGAAERPARIIIDPGHGGAKEGAKGPGKLREKDVALQISLRLRDKLEAAGGDVYLTREQDALVTLTERVAWTNDHKPDLFISVHANSMPTKKMRARTEGIETYFLSANASGDAALAVADRENAEAPMSRAARTDSTLAFILQDLARTEAHADSSRLAYAIHPRLIRSTRAANRGVQQAPFFVLSGVECPAVLLEVGYISHPVEGPRLGRPEYQEKLAAAITEGVLAFLKETRRRDAVRGTEVAGPVSP
>NZ_CP012109.1|WP_002637343.1|6217467_6218181_-|ribonuclease-PH
MRSFQRGALDLRPVILTPGVSRYAEGSVQVEFGHTKVLVTCSTEERVPPHLMGKGTGWVTAEYGMLPRATHSRNQRESAKGKQTGRTMEIQRLIGRSLRAAVDLSTLGTRTLTLDCDVLQADGGTRTASITGAYVALVLALRSLQKAGTLSKMPKLTPLAAVSVGIVKGEVRVDLDYDEDSTADVDLNLVATADGRMVELQGTAEHQLFDRKALDAMVDGGLAAIQRLTAAQAQVLG
>NZ_CP012109.1|WP_002637344.1|6216877_6217471_-|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase
MTVKPRLLFATTNKGKLRELRGLVGDAVEVVSLSDLPPVPEPAEDGATFEENAVMKARAYADATGLLTLADDSGLCVDALDGRPGVQSARYAPGDDRARYEKLLTELTGVPDEKRTASFRCALALVRPGGGEAKVEVGQCNGRIGHAPKGSHGFGYDPVFILPGGDRALAELTPEEKSAISHRGKAFQKMKPHLLGL
>NZ_CP012109.1|WP_002637334.1|6224834_6226253_-|PilT/PilU-family-type-4a-pilus-ATPase
MELNEILQIALRGGASDIHLKAGLPPMFRVDGSLVPLKDGRRLPPEEVARMAFGIMNEFQKEKFKSSNEVDLAYGVPGLGRFRVNVFQQRGTVGAVLRVIPFKVMTIQDLLLPQILAKICGEERGLVLVTGTTGSGKSTTLAAMIDHINANETSHIMTIEDPIEFLIRDKRSIVNQREVGVDTMSFSQALKSALRQDPDVILVGEMRDHETIETALHAAETGHLVMSTLHTLDATETINRIVSAFPPHQQKQVRLQLASVLKGVVSQRLVPRADGKGRVAAVEVLRVTARVRELIEDKDRTKEIHDAIAQGTDSYGMQTFDQSLMSLVRQGLVTYEEAHRQASNPDDFALRFSGISGTSDSKWDNFDAKPGDSRPIPGSSAFAQKGAPTGAPAPQAAPAPAPMAQPMRPAAPAPQAMRPGAPAPQAMRPGAPAPGMPVGRPMAPPPAARPPAPAPAPAPAAGGDDDFQIERF
>NZ_CP012109.1|WP_002637333.1|6226383_6226785_-|30S-ribosomal-protein-S9
MPINQDLGFYATGRRKEATARVWIRPGTGLVTVNGRELNAYFGRETSKMILNQPLEILEQKGKIDVTVNVKGGGLSGQAGAIRHGIARALCSFNPEFRPALKKAGFLTRDARAVERKKYGQPGARRRFQFSKR
>NZ_CP012109.1|WP_002637332.1|6226799_6227246_-|50S-ribosomal-protein-L13
MSQKTYSAKAGDIKRQWHVIDVSDKVLGRAASQIATLLKGKHKAIYTPSIDTGDHVVVINADKVKVTGTKEQDKMYYRHPRAGFPGALKITNLAKLRQRHPEDIVINAVRRMLPRNALGRQMMTKLKVYAGDTHPHAAQKPAAFEVEA
>NZ_CP012109.1|WP_002637331.1|6227458_6229534_-|UvrD-helicase-domain-containing-protein
MDLSKLNPPQREAVVTLEGPLLVLAGAGSGKTRVITHRIVHLLNERPGLIMARNILAVTFTNKAATEMKERLVHMAGPRAQGVLVCTFHAFGAEMLREDIHRLGWPKKFAIADMGDQLANIRRAMREHKIDDRAFDARKVLGLISKAKNSGKTPEPKPEGMGDDYDLITHMVYPDYQLGLKAQGSVDFDDLLLLPARLLREHPDLYEKYTKRFRFLLVDEFQDTNTAQLDLLKLLAGRSRNVCAVGDDDQCIYSWRGAEVRNILDFDRLFPGGKEVRLEQNYRSVQTVLDAANAVIAKNPERKAKQMWTDRKGGVKVKVVNCPNDEEEARFVAHEIQKHIALGISADDIAVLYRTNGQAHPVEETLREKQIAYEVVGGSEFFDRREVKDVIAYFKVIVNKLDEISLMRIVNVPSRGIGDVTMERLQVHARGEGVTLWTAMRKATEYEDLPPGAGGRVAEFVELVERYRAAYEHGQLATVTTKLLEEIGFREATRAHATSATAADKKLKGVDGVLNSLEKFEKREGPKASLLTYLNRLSLDTRQEEEEVPGANRRVTLMTVHASKGLEYRLVFFIGMEEDLMPHGGMQGEAQNLEEERRLCYVGITRAKEVLYLTRAATRVKRGKEVPRTPSRFLEDLPPEVVELVSLDAPREGPPTTEEKNFFANLKERFKKPGIPGTPPGGAGPSGGAAR
>NZ_CP012109.1|WP_044890943.1|6229661_6230144_+|hypothetical-protein
MTPVVAAESAPCVYFKRLTPFLPERLDGFTVAHTQGSTGKYGEVSVSEAERLYTRGEGREVKVRIVDTTMGERIGNAIREAATRAQGRAASDPAAPILLDDAVGFVRYDAEESMAEANLLVGGRYVVAVTSRGFPGTVEVRRVARGIDLAGLARLKPAPN
>NZ_CP012109.1|WP_002637329.1|6230160_6230658_+|hypothetical-protein
MVKDKGTRPEKADLVVQEKAAREVVSTLGKREFLEQFQKLTKGFAADPGNPGSYACEGCQRCANCMFCKDCDSCFTCTHCTRCELCNNCSHCVDCKSCNACAYCVQSENCSTSAYLVLCRNLQDCNYCFGCVGLSKKDFHILNVPFPRTEYFKVVGRLRKELGIP
>NZ_CP012109.1|WP_002637328.1|6230684_6231872_-|class-I-SAM-dependent-rRNA-methyltransferase
MPPPAALPVARVTPKGARSLRHFNPWLYRTEIAAPPDVKGPGAVVLVVDSQGNPIGQALYARRSPLALRLLTRKSPADEPVDDAFFRRRLEAALARRAYLSGRDGLRLVHGEADQLPGLFVDRYGKGLTLQTLSEGMDARKETLAKMLVELTGATHVMCRDDASGRDFEGLPREARLLHGEGAARFTYHEGENRFEVDLQGDMKTGAFLDQVDNHLRAGELARGDALDLFSYHGGFALSLARTCTSVLAVEQDEKAAARAKANAEANGRANVTVENANAFDVLRRFDTSGRRFDTVVLDPPGLAKRREGMATALRAYHELNLRAFRCLKPDGLLVTCSCSGKLDRAAFEEMVLSAAADAKRPVQILERRGAGLDHPVLAGLPETEYLKALYVRAL
>NZ_CP012109.1|WP_044890944.1|6231877_6233110_-|metallopeptidase-family-protein
MSRRGLLALCLLLVACKRGAPAAEAQAPSCPAEPTASAPAGAASHSSVRPGPLPEDATHRVQPLAVCKSDGAAPLDASRRYFEDGRFEEALSCAAQAAALEPDLAAAHAERGVALAALGRETEAQLAYARALAIDPGDPSALLGSAHLYAVQLPSTRERDELGALYAERGLSQPNTPPELIPHLALVAAMAFNDLGQAESSLAHSAIVLARNPGSREALYERALALFELCRFGDARTTFAGLVDDPERAAHAHQHLGLLLEREGKWKQAQVHFEKARALAPDDFPEPPLPSEEDFRAEVLKAVAALPKDMRGDLNGVPVTAEELPADADLLANQPPLSPTILGLFRGPPLSEPCDGSETPCRSVVLYRRNLARAVRTSEELREQIRVTLLHEIGHLRGEDDEELAARGLE
>NZ_CP012109.1|WP_002637326.1|6233216_6233798_+|septum-formation-protein-Maf
MSELILASTSSARRALMDGLGLPYRAEAPGVDEVVSPHLSAEDAVRELASRKARAVHQRHPEAWVLGADQLVEVAGEILSKPQDRNAAREQLGKLLGHTHAIHTGVCLVGPDGQVHEAVETARLGFYALSAEELERYLDLDEWVGCCGSYRVESAGQALLERLEGDRSNVQGLPMVTVVRLLRSAGFRFFERR
>NZ_CP012109.1|WP_002637325.1|6234051_6235014_-|hypothetical-protein
MNVQVLFHDSCFDGAASAAVFSRFYRERIRPDVAFRYLGLNHKPGAEGIDPAVFTGDENVIVDFRYSQDARLTWWFDHHASAFQQPGDEAHFRADTSGRKFHDGHRKSCTKYLADVAGERFGWDAAPMAELIHWAEIIDGAQFPSPQMAVALEEPALRIMTVLEANKDPALIPEVIRRMQTESLADIAASPLIAGPLAPLLERHQSNIELVRTHARYERGVVFFDLVDQGVDSLNKFIAYALYPDARYTLWVGKGASRAKVSIGSNPWKPETRRHDLSAIAGRYGGGGHPVVAAVSFKADQADKARAAYAEILAELSSDA

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Crispr_ID: NZ_CP012109_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_17

6923767-6923983

Orphan

Consensus_repeat	Method
GTTCGGCGCGGGCCTCGGCTTCGGC	CRT

3 spacers

The CRISPR arrays of NZ_CP012109_17

>merge|NZ_CP012109|17|6923767-6923983|CRT
TCCCTGCGAGGGCCTCGGCTTCGGCTCGCTGCCGGGACTCCTGTTCCGCGCGGGCCTCGGATTCGCGTTCGGCGCGGGCCTCGGCTTCGGCTCGGCGCGTGGCCTCCGTGGCGACCCGGGCCTCGAGTTCGGCGCGGGTCGCGGCTTCGGTCTTCGCGAGCGTCTCCGCCTCGGCGCGCAGGGCGGCTTCCCGTTCGGCTCGGGCTTCGGCTTCGGC

>NZ_CP012109|17|4|6923767-6923983|CRT
TCCCTGCGAGGGCCTCGGCTTCGGC	TCGCTGCCGGGACTCCTGTTCCGCGCGGGCCTCGGATTCGC
GTTCGGCGCGGGCCTCGGCTTCGGC	TCGGCGCGTGGCCTCCGTGGCGACCCGGGCCTCGA
GTTCGGCGCGGGTCGCGGCTTCGGT	CTTCGCGAGCGTCTCCGCCTCGGCGCGCAGGGCGGCTTCCC
GTTCGGCTCGGGCTTCGGCTTCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002635487.1\|6941642_6942587_-\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_CP012109.1\|WP_002635496.1\|6928846_6931099_-\|primosomal-protein-N'	unknown	unknown	gnl\|CDD\|235514
NZ_CP012109.1\|WP_002635500.1\|6919650_6920676_-\|low-specificity-L-threonine-aldolase	unknown	unknown	gnl\|CDD\|178323
NZ_CP012109.1\|WP_002635493.1\|6932884_6933787_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NZ_CP012109.1\|WP_002635498.1\|6921419_6921947_-\|peptide-deformylase	unknown	unknown	gnl\|CDD\|234668
NZ_CP012109.1\|WP_002635506.1\|6912476_6913742_-\|CinA-family-nicotinamide-mononucleotide-deamidase-related-protein	unknown	unknown	gnl\|CDD\|234789
NZ_CP012109.1\|WP_044889378.1\|6910953_6912480_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044889373.1\|6942718_6944239_+\|peptidase-M3	unknown	unknown	gnl\|CDD\|341049
NZ_CP012109.1\|WP_002635502.1\|6918215_6918485_+\|HU-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|259853
NZ_CP012109.1\|WP_002635492.1\|6933847_6934696_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044889472.1\|6920710_6921460_+\|endonuclease-III	unknown	unknown	gnl\|CDD\|223255
NZ_CP012109.1\|WP_063787460.1\|6915983_6916844_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044889377.1\|6914810_6915974_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP012109.1\|WP_002635495.1\|6931365_6931992_-\|glutathione-S-transferase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|166036
NZ_CP012109.1\|WP_162492074.1\|6936598_6937195_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_049872397.1\|6938203_6940597_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235906
NZ_CP012109.1\|WP_021781024.1\|6944257_6944602_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002635494.1\|6932132_6932888_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044889375.1\|6918506_6919511_-\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
NZ_CP012109.1\|WP_002635505.1\|6913853_6914717_-\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|224104

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002635487.1\|6941642_6942587_-\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	1.84308e-74
NZ_CP012109.1\|WP_002635496.1\|6928846_6931099_-\|primosomal-protein-N'	gnl\|CDD\|235514	PRK05580, PRK05580, primosome assembly protein PriA; Validated.	0
NZ_CP012109.1\|WP_002635500.1\|6919650_6920676_-\|low-specificity-L-threonine-aldolase	gnl\|CDD\|178323	PLN02721, PLN02721, threonine aldolase.	8.37971e-140
NZ_CP012109.1\|WP_002635493.1\|6932884_6933787_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	2.12148e-158
NZ_CP012109.1\|WP_002635498.1\|6921419_6921947_-\|peptide-deformylase	gnl\|CDD\|234668	PRK00150, def, peptide deformylase; Reviewed.	1.21598e-83
NZ_CP012109.1\|WP_002635506.1\|6912476_6913742_-\|CinA-family-nicotinamide-mononucleotide-deamidase-related-protein	gnl\|CDD\|234789	PRK00549, PRK00549, competence damage-inducible protein A; Provisional.	1.75748e-133
NZ_CP012109.1\|WP_044889373.1\|6942718_6944239_+\|peptidase-M3	gnl\|CDD\|341049	cd06258, M3_like, M3-like Peptidases, zincin metallopeptidases, include M2_ACE, M3A, M3B_PepF, and M32 families. The peptidase M3-like family, also called neurolysin-like family, is part of the "zincin" metallopeptidases, and includes the M2, M3 and M32 families of metallopeptidases. The M2 angiotensin converting enzyme (ACE, EC 3.4.15.1) is a membrane-bound, zinc-dependent dipeptidase that catalyzes the conversion of the decapeptide angiotensin I to the potent vasopressor octapeptide angiotensin II. The M3 family is subdivided into two subfamilies: the widespread M3A, which comprises a number of high-molecular mass endo- and exopeptidases from bacteria, archaea, protozoa, fungi, plants and animals, and the small M3B, whose members are enzymes primarily from bacteria. Well-known mammalian/eukaryotic M3A endopeptidases are the thimet oligopeptidase (TOP; endopeptidase 3.4.24.15), neurolysin (alias endopeptidase 3.4.24.16), and the mitochondrial intermediate peptidase. The first two are intracellular oligopeptidases, which act only on relatively short substrates of less than 20 amino acid residues, while the latter cleaves N-terminal octapeptides from proteins during their import into the mitochondria. The M3A subfamily also contains several bacterial endopeptidases, called oligopeptidases A, as well as a large number of bacterial carboxypeptidases, called dipeptidyl peptidases (Dcp; Dcp II; peptidyl dipeptidase; EC 3.4.15.5). M3B subfamily consists of oligopeptidase F (PepF) which hydrolyzes peptides containing 7-17 amino acid residues with fairly broad specificity. Peptidases in the M3 family contain the HEXXH motif that forms part of the active site in conjunction with a C-terminally-located Glutamic acid (Glu) residue. A single zinc ion is ligated by the side-chains of the two Histidine (His) residues, and the more C-terminal Glu. Most of the peptidases are synthesized without signal peptides or propeptides, and function intracellularly. There are similarities to the thermostable carboxypeptidases from Pyrococcus furiosus carboxypeptidase (PfuCP), and Thermus aquaticus (TaqCP), belonging to peptidase family M32. Little is known about function of this family, including carboxypeptidases Taq and Pfu.	0.00670943
NZ_CP012109.1\|WP_002635502.1\|6918215_6918485_+\|HU-family-DNA-binding-protein	gnl\|CDD\|259853	cd13831, HU, histone-like DNA-binding protein HU. This subfamily includes HU and HU-like domains. HU is a conserved nucleoid-associated protein (NAP) which binds non-specifically to duplex DNA with a particular preference for targeting nicked and bent DNA. It is highly basic and contributes to chromosomal compaction and maintenance of negative supercoiling, thus often referred to as histone-like protein. HU can induce DNA bends, condense DNA in a fiber and also interact with single stranded DNA. It contains two homologous subunits, alpha and beta, typically forming homodimers (alpha-alpha and beta-beta), except in E. coli and other enterobacteria, which form heterodimers (alpha-beta). In E. coli, HU binds uniformly to the chromosome, with a preference for damaged or distorted DNA structures and can introduce negative supercoils into closed circular DNA in the presence of topoisomerase I. Anabaena HU (AHU) shows preference for A/T-rich region in the center of its DNA binding site.	3.35351e-29
NZ_CP012109.1\|WP_044889472.1\|6920710_6921460_+\|endonuclease-III	gnl\|CDD\|223255	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair].	3.82835e-91
NZ_CP012109.1\|WP_044889377.1\|6914810_6915974_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.40436e-16
NZ_CP012109.1\|WP_002635495.1\|6931365_6931992_-\|glutathione-S-transferase-N-terminal-domain-containing-protein	gnl\|CDD\|166036	PLN02395, PLN02395, glutathione S-transferase.	9.27693e-45
NZ_CP012109.1\|WP_049872397.1\|6938203_6940597_-\|hypothetical-protein	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	0.000385575
NZ_CP012109.1\|WP_044889375.1\|6918506_6919511_-\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	1.39904e-30
NZ_CP012109.1\|WP_002635505.1\|6913853_6914717_-\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	gnl\|CDD\|224104	COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism].	6.03178e-48

>NZ_CP012109.1|WP_002635498.1|6921419_6921947_-|peptide-deformylase
MVREILIWPDPVLKQKAKPVAKVDDSIRTLVKDMFETMYSAEGVGLAAPQIGVLQRVIVLDTTHAQPELKPVAMINPEIIAMEGDTTYNEGCLSIPGESADVDRAAAVTVKFLDPDGNEQTLRCEGLLSIAVQHEADHLNGTVFVDHISSLKREFIRKRMKRLKTSREQGASASP
>NZ_CP012109.1|WP_044889472.1|6920710_6921460_+|endonuclease-III
MLGLLAGVTYNGAVPGRETVAEKRKRALTVMDRLAADMPDARIELDYRTPLELLVAVMLSAQCTDKRVNIVTPALFQRFPSAQTYAEAEPSDVEPFIRTCGLYRAKAKNIVAAARTLVAEHAGQVPLKRDTLEKLPGVGRKTAGVVCIHLGGDDAFPVDTHVKRLAYRLGFTTKEDPDKVEADMQAVLPSERWTLGHQLLVWHGRRTCFARSPDCARCVVADLCPKKGVKAAPAEAATEKPTRPARAKS
>NZ_CP012109.1|WP_002635500.1|6919650_6920676_-|low-specificity-L-threonine-aldolase
MKRIDFRSDTVTQPTAAMRRAIADAEVGDDVYGEDPTVLRLEARVAELLGLEAAVFVPSGTQANQLAIGAHCRPGDEVLTEAGSHILHYEGGAVPALWGVQPQPLPGQRGLLTPEAVSAAVREDNIHNPRTRLLSLENTHNRGGGAVWPVERFQAVVEAARKAGLGVHLDGARLFNASVALGVPVSAWASRTDTTAVCFSKGLGAPVGSALVGRVDLIREARRLRKRLGGGMRQAGILAAAALYALENHVSRLADDHANARRLAAGLAELPGVTVDTASVETNMVFAEFPQAAHEVVALLERHGVLTNPAGAPRTLRLVTHLDVSARDIDEALSRIRRAVA
>NZ_CP012109.1|WP_044889375.1|6918506_6919511_-|M23-family-metallopeptidase
MRRLSLFALLTACACANRGAEPKMSFEELYASAPSRSPGQGAEGAALRVRHRVPESSSELHATLATFSTQAQALRQQVARGGVMPAAQVENWEQVTLALDGFLLRPVARVDSSDLLRAQSLLETELERDGFTYGDIPATLAEAVVLRVGRLAVRTAELRRLEQPPVAAEDLPPRFSWPLEPVSVTSLFGYRWHPVTGVHRRHLGIDLKATQGQLIFSADKGVVLRAGRNGDHGLQVEVQHEGRWVTRYSHLSRILVDAGEVLERGNAVGMAGETGLATGVHLHFELWLDGQPMDPLEALGDAEPPPEPAPPVARGPAVGYPAKHQGRLLSEERP
>NZ_CP012109.1|WP_002635502.1|6918215_6918485_+|HU-family-DNA-binding-protein
MTKAELVEVVAAQTRLTKKSAAQILDIVFTNIGKAVKKDARFSYPGFGTWSVRSRKARKIRNPQTNEMMKLKASKTIGFRPAKELKNSL
>NZ_CP012109.1|WP_063787460.1|6915983_6916844_-|hypothetical-protein
MRGADSQVVVEDTRFSGPATAVSVDEARAEVRRSTAEGGQSAAFSVMNGMLVLDDVKVTGHEYAVSAMRARRLEVRRFTSVRALRAGMGLSMSQAQLRDIVVRDSGEYGGLQFMGGDLDVERIRIEGASEYGLMAIRGKLRLRDATIERVRTSDGIAGDGLHLRQLEADVEDVVVRDAQGACVLVAQDARVSLRDANLRGCGAVGLLVDTLSRLRASEVEIRGAATALGALGDGELHVDGLTARDLAEGLVHAECGGATQVRLRNVRTEDTRGLSAACVHREAPPK
>NZ_CP012109.1|WP_044889377.1|6914810_6915974_+|alpha/beta-fold-hydrolase
MDASRWAVWVLVAGVALVLWNVVWVAAVRRWYRPRTELPQVLRARCKDGWELVVHVRRAPVRRFEEPVLLCHGLAANRFTFDFEPPYSVAHYLAEAGFDCFSVEWRGTGHSRQPPRGRRYTDFTIDDHILQDGPALLELALKETGAKQAFWLGHSLGGLVGYAVAQGELGGKLAGLLALGAPVHLKSEAFLRTLISMGVRAAWPARFRQEWMSASMAPFLGYVTLPLSDLLVNPEHIPPRIQRQVYANMMSSMSRKVLLQFQDWIEHDAFRSFDRTKDWRAGIARLEMPLLIMGGSSDRLATAANVEAQFALATATDRTLHIFGTDHGDKMNYGHGDLIFGTGAPTEVYPVIREWLERHASPLLTAITEPAPDPVDEEPREPERSVP
>NZ_CP012109.1|WP_002635505.1|6913853_6914717_-|CDP-diacylglycerol--serine-O-phosphatidyltransferase
MMKLRKLMFVLPNLFTVTSIFCGFYAMTLCTGDAEPVQMYQAALAIFFAMFFDGFDGRVARLTKTQSDFGVQLDSLADVISFGAAPSLLVYKWALEPLGFVGLFIAFSFAACGALRLARFNVLAARNPHGGGGSFFVGLPIPVAAGMLVSVIISHHAATQGEPLAEGAVVPMAVAVAGLSLLMVSTVRYRTFKDTRPNRKSALALMLVAVGGTVIATQLHPAWVLVACCGAYLALGLLESAVLVRSRLVARKVAAPGAVAVAAVIDDEGEEEEESEPGQGSDGPAYL
>NZ_CP012109.1|WP_002635506.1|6912476_6913742_-|CinA-family-nicotinamide-mononucleotide-deamidase-related-protein
MRVELLCTGDELVTGLITDTNSTYLEARLFDLGIKVERVVLVGDVRADITQALKEAASRADVVVVSGGLGPTADDFTLECAAVAAGVPLAEDPRVLQWLHERYAARGLSPNPSALRMARVPQGAEPLKNPEGSAPLVLMKLGGAQLFFLPGVPREFRALLEGEVLPRVRAALDVQPGRTYRAFRLLRTVGVPESELDLTVAPMAPRHPRVVFGFRTHAPENHLKLMSEAPSQSEADAALAAVEQECRQVLGRRVFGADAEEYAAVLLEMLRQAGATLAVAESCTGGLIAQQLTAVPGSSSVFIGGAVVYSEKMKSAWVGVPTDVLDRHTAVSRETAIAMADGVRTACGTTYGLSVTGYAGPGGGTPEDPVGTVYCGLSVPGAPPRCERISVKGDRDRVRLFAASHTLEMLRQHLLAASSLP
>NZ_CP012109.1|WP_044889378.1|6910953_6912480_-|hypothetical-protein
MSRSKSKRPRSSSTEPAAVSPVATQGVSTASTMSLPVAPAAPTSALEPSAGQGHTSSPGPEPVPAPGPSGNVPLSALRMWLAAYRVEVVLFLVAFVVLASFSSQRFLRQSAAPHFVYQAQAWLEGRLDVDPQVLPNMEDWACVRVVDGDKVRCSGRPLPTDRWFVSFPSFPAVAMLPFVALHGYQFNDTSFGVIVGALAVALFYSLLRFLAKDGETARNRNENIALALILAFGTLFFYCAIRGEVWFSAEVMGVALTCLYVRNAVRARHPLLAGLFFSMATLTRTPLVFTGLFFVLEALCPGPESRLAQLKALTRNWQPAARKLGLFTLGALPFAGLAAAYNVYRYGRLSEFGHAYLFNNRVNADIDRTGLFNWEYLGRNLEAAFFTLPTVSLSPLKLAYDPHGLTLLLTLPLLVFLLVPKTRPRLHWPVWLTVAVCALPGLFYQNTGYMQFGFRFSLDYTPYLLMLFALGGWSLRNRAVLAAVSLGVLVNFWGAVAFRGYTELVRNW
>NZ_CP012109.1|WP_002635496.1|6928846_6931099_-|primosomal-protein-N'
MRAEVSAPVLASIAVGRPVRGEFTYTLPEELAGRLEPGQRVLVPFGRGTALGFYLGPASPPPGEKVRLKAVQRVLEDSPSLPKDLIALLRFAAVHYRYPLGEVIRGALPPGLSKAVEEKEAKPDVQHFAVALVNEVPPELSRAPAQSAALAYLLAVGGRAPLEEVAHAIPGARETLKKLATRGFAKLEEKTVEAGVKEGLIQGRPDHLTPEQAAAGVELRAALDAGAFQPFLLHGVTGSGKTEVYLRAAEHALTLGKGTLILVPEIALTPQLVGRFRSRFGSEVAVLHSALKDRERLFHWQALRRGDVKIAVGVRSAVFAPVNNLGLIVVDEEHDPSFKQEEKLRYQARDLAVVRGKQASAVVVLGSATPALETLENVNRGRYRLLELKRRVDDRPMPSIEMVDLRLERPREGVVTEEAPILSPPLLAAMEETIGRGQQVILFLNRRGHSTVLLCEVCGLSLKCSECDVCLTHHRSQSRVVCHYCGLAMPVPEQCLECTGPMLKLGIGTERVEAEVLERIPTARVARLDRDSATSAERLTEMLASFARRELDVLVGTQMVAKGHDFPGVTLVCVVMADTSLSIPDFRAAERTFHLLTQVAGRAGRGKDPGRVLVQTYNPDAEPVRRVLAHDFSGFSTQELEWRKALAYPPYSRMAAVRLEGEHPEQTASVARSLGNLVSRNMPPASAGVRLLGPALAPISRIRGKTRWQFLLKGPTHTALAPLLARVEAALAEVPSTVKVVIDVDPGAML
>NZ_CP012109.1|WP_002635495.1|6931365_6931992_-|glutathione-S-transferase-N-terminal-domain-containing-protein
MKVYGHPMSTATRMVLTTLAEKGQEAELVLIDLAKGEHKQPAHVERQPFGVIPAFEDDDGFRVYESRAIIRYLDRKLPGAALTPSDARAFAAMEQFISVEHSYFTPAAMKVIWERLFKPFFGGGAADEARIDEGMKGVERVLGLVDPVLSKQPYLAGDGFSLAEVCWMPYMDFFVAAGGGTLLGQYKGVASWWERVSARPSWKKVTGA
>NZ_CP012109.1|WP_002635494.1|6932132_6932888_-|hypothetical-protein
MKRTVALLAVLVSFAAGAYVLPGSSIIRRMAAERAEQRLSTLRVEGSLSFGGASVKEAGAALGTPTDRPEVQGDGVLSIRTPGRCRFEASVADGSTPSAVVQSGGRRKAQGTEIPAMSVLVAQVCPLLATGSGNVQEVKESVLRHLQSLGVETGRTGLARLGGEVAYVLGEMAEGRPQFWVYKDSFRPARLRYTDASGTAWDVRFLDYNSPATGELMPRTIEVWRGGQRNLRFTALKGDNRASLPDALFTL
>NZ_CP012109.1|WP_002635493.1|6932884_6933787_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MASKTPKVEPLIRKCVIPAAGLGTRFLPATKAVPKEMLPIVDTPTLQYIVEEAVSAGIEDVVLINGRGKSSIEDHFDIGFELETTLRSRGKEGEADKLRAIAELVRVVSVRQKEPKGLGHAVLCAKSVIGNEPFGVLLGDDMIDAEEPGIRQLARVYRQYNQAVIALMEVPDDETHMYGIAAGTDLGDGVMRIERIVEKPKKGTAPSNLAVIGRYVLPPDIFPILENQTPGVGGEIQLTDGLATLQQQQGLLGYRFKGQRYDAGDKVGYLKANIAYALKRPELRSGLLEFMREVVKTEKP
>NZ_CP012109.1|WP_002635492.1|6933847_6934696_+|hypothetical-protein
MSLRSLVLIALCVSTTSLAQPAEDLRDVMSARAYGMGGAYRALGLGGDAMLGNPAAMVLFPSYRLEGTGGWDVEKKEGQLGVSVIDAATSRLGMGLDYHWVSVGRGGARASAHMSSLGVGLPVSEMLMLGATVRYLRMSGQSRFANSVTGDAGIILRLSQQLMAGFSAHNLVDTGNEELTRYYSAHVGVMTGLLTLAGDVRADFTTNDATTFTYHGGMEYILGQVFPFRAGYTYDGFTRTSQLSTGLGFMSEGGGGIDVAYRHDLGGPKGRLLALTIKLNMN
>NZ_CP012109.1|WP_162492074.1|6936598_6937195_+|hypothetical-protein
MPVQSRFRGPKQGYAVQVRERFQRQMPGYAVPVQARFRGPKQGYAVRALPHFRRPRPGCAARARAHFRGLKQGCAAQALPHFLKPMQGYAARAPVRFQEQTADSSARALPHFLKPMQGYAAQAPGRFQAQTQHSWTPNPPTLQKALGCAARAPVRYQAQRRDCAARALVRSRAAMRGRVTRALMESSQQRPPLGPSWT
>NZ_CP012109.1|WP_049872397.1|6938203_6940597_-|hypothetical-protein
MGGVRNGKNAGTPEHAAVRQEALQPGASGGKAAVDTSEVVDGHIRAAARLLREGSAARAFGELARASRGLSMTPRLAAGIVRMALLAGTEAAAIITLEAAPTAAFSRRAVHRQLARVLRRVEQVPRAIAALEALLLEWPDDRRAQRVLQVLRARASGGGGVVPEEGATSTQGVLAKLPVRKDGAPDAASWEYDDRVYLIETVIGPPLTVATPAGGQGASPTGAATRAEASVVVEGGGAQGGSRTSATELPSVVIAVEAAPVGAPRKSATELPEVETPLVGSEPKVSGPRTSAAELSAAGLPPVASESRASGPRKSATEFPVVETPPVGSESKVSGPRKSATEFPVVETPPVVAEPEVRGPRKSATEIPVVETLPVVAEPQVSGPRKSATEWPSVGASPAPAVSRPGGSRKSVTELPAAELSSSASDAPTNPARKSVTELPAAELASGDTSEATRQSATESSVVATPSGDSVAHASGSNVSATETPSERKPPVAAGSRSMAVPPGGAAPELEGVEAQVPATGVASPSTSLESHKTVLELPAINIPVAQAPRTLVELPAISVPPRALDFEARKTEVEMPALGADVLVPRTEPAREFAFKSEALSVPWTDSPDDDGPTALRSSQPAATWHDASASDEVTSEAQPFHLADAPPPVPPRASAPAKAERRKTPVASEALPAAVASKVDPAVDSRSGTMEVSLAELEAALSGGPATASSVAAPAEPRSSTHEDDNDEVTRSQKVEAQLIARRAWAELAQLYLKRADQAKDASRRAEALTRLAEVMENELHDPRVPRGCTGKSST
>NZ_CP012109.1|WP_002635487.1|6941642_6942587_-|RluA-family-pseudouridine-synthase
MKRRTFRVEGALVGKAVDAAVASELGLAEARARELVGVGAVYVAGKRSRDAKARLVAGQVVTVVLEEGGQSALAEAAPAPELRVLYEDADVIAVDKPAGVTAQPTEGRVGGSLVDLVGEKLGRPAGLVHRLDRETSGVTVFGKSAEATSALAAEFREGRARKRYVAVAGPGLPLNGTVDLPLSKDPSRPGRWRATRAANGVPALTDFHTLFSGPAFCVVELLPHTGRTHQLRAHLTALGAPILGDARYGGLPRAGGVEAARCLLHAQALELGHPRTGKVLRVEAPVPEDVMRFFAAAGLAALTGPIRAWGPEGA
>NZ_CP012109.1|WP_044889373.1|6942718_6944239_+|peptidase-M3
MDRPLHSVRTRLDEFLAELATLHYRNGAGLPPESSAAELLAAFPELSSPDTFSAANEALAKARSRNDALTVRRIQLVREVVASHVEDALATRHVDAIATLESQARLTADDQTYAFGEALARIPREPGRGRRALLERATGEFLWQNRTRYGDRREAALQAAEQLGAKDYPALRQDVTGIDYDALAESAQRMLVKTEDAYRDVLAYVLKKVDPLLRPLPSGDARRHDLQTALQAPWMDGFFRREDAFPAVVRWLGEWGLTPNAGGRIRIDDEDRPGKASRPFVAVVRVPNDIRLVLQPRGGLDGLAGLLHELGHAQHRAHVSDTLPMELRRLGDASVTEAHAAVFERVLLSSEWHKRYLGLPTMAARDTVRLAAFQALTLLRRHAAKLSYELSLTRKGASAERADEYADGQRHALFVEPHPGFFLHDVDPQLYVAHYLRSWALETQLTARLTERFDEDYWRNPAAATWLKGLYARGGTDDAEGLATETSGTPLALPEAGERLVAILNR
>NZ_CP012109.1|WP_021781024.1|6944257_6944602_-|hypothetical-protein
MERKVGSSTVTAKEVKAALEKTRTLSAEEEKVLRMRHGAGASSSRAPLARAAGDNAELADELLLIEMQLMKAMRARAGAKPAASASKPVAATRARDAAANPTKDKIVRALRKKK

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Crispr_ID: NZ_CP012109_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_18

6936124-6936279

Orphan

Consensus_repeat	Method
GGGGGGAAACCCGCTGCATCCGCGTTATCGCTGCTCGCGGCGGGGGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_18

>merge|NZ_CP012109|18|6936124-6936279|CRISPRCasFinder
GGGGGGAAACCCGCTGCATCCGCGTTATCGCTGCTCGCGGCGGGGGCGCGAGGCGCGGGGGCTGGCTTGTTGCCCGGGGCCGAGGCGGGATTGCGCGGCGCGGGGCTCGGGGGGAAACCCGCTGCATCCGCGTTATCGCCGCTCGCGGCGGGGGCG

>NZ_CP012109|18|13|6936124-6936279|CRISPRCasFinder
GGGGGGAAACCCGCTGCATCCGCGTTATCGCTGCTCGCGGCGGGGGCG	CGAGGCGCGGGGGCTGGCTTGTTGCCCGGGGCCGAGGCGGGATTGCGCGGCGCGGGGCTC
GGGGGGAAACCCGCTGCATCCGCGTTATCGCCGCTCGCGGCGGGGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002635487.1\|6941642_6942587_-\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_CP012109.1\|WP_002635496.1\|6928846_6931099_-\|primosomal-protein-N'	unknown	unknown	gnl\|CDD\|235514
NZ_CP012109.1\|WP_044889372.1\|6948027_6949665_+\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|379140
NZ_CP012109.1\|WP_002635500.1\|6919650_6920676_-\|low-specificity-L-threonine-aldolase	unknown	unknown	gnl\|CDD\|178323
NZ_CP012109.1\|WP_002635493.1\|6932884_6933787_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NZ_CP012109.1\|WP_162492074.1\|6936598_6937195_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002635483.1\|6944840_6945866_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044889373.1\|6942718_6944239_+\|peptidase-M3	unknown	unknown	gnl\|CDD\|341049
NZ_CP012109.1\|WP_002635502.1\|6918215_6918485_+\|HU-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|259853
NZ_CP012109.1\|WP_002635480.1\|6947213_6947975_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP012109.1\|WP_002635482.1\|6945971_6946838_+\|DUF2058-family-protein	unknown	unknown	gnl\|CDD\|240291
NZ_CP012109.1\|WP_002635478.1\|6949661_6951488_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP012109.1\|WP_044889472.1\|6920710_6921460_+\|endonuclease-III	unknown	unknown	gnl\|CDD\|223255
NZ_CP012109.1\|WP_002635492.1\|6933847_6934696_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002635495.1\|6931365_6931992_-\|glutathione-S-transferase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|166036
NZ_CP012109.1\|WP_002635498.1\|6921419_6921947_-\|peptide-deformylase	unknown	unknown	gnl\|CDD\|234668
NZ_CP012109.1\|WP_049872397.1\|6938203_6940597_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235906
NZ_CP012109.1\|WP_021781024.1\|6944257_6944602_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002635494.1\|6932132_6932888_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044889375.1\|6918506_6919511_-\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002635487.1\|6941642_6942587_-\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	1.84308e-74
NZ_CP012109.1\|WP_002635496.1\|6928846_6931099_-\|primosomal-protein-N'	gnl\|CDD\|235514	PRK05580, PRK05580, primosome assembly protein PriA; Validated.	0
NZ_CP012109.1\|WP_044889372.1\|6948027_6949665_+\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|379140	pfam13360, PQQ_2, PQQ-like domain. This domain contains several repeats of the PQQ repeat.	3.28562e-05
NZ_CP012109.1\|WP_049872397.1\|6938203_6940597_-\|hypothetical-protein	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	0.000385575
NZ_CP012109.1\|WP_002635493.1\|6932884_6933787_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	2.12148e-158
NZ_CP012109.1\|WP_002635498.1\|6921419_6921947_-\|peptide-deformylase	gnl\|CDD\|234668	PRK00150, def, peptide deformylase; Reviewed.	1.21598e-83
NZ_CP012109.1\|WP_002635478.1\|6949661_6951488_-\|HAMP-domain-containing-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.26975e-45
NZ_CP012109.1\|WP_002635480.1\|6947213_6947975_+\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.25599e-72
NZ_CP012109.1\|WP_002635502.1\|6918215_6918485_+\|HU-family-DNA-binding-protein	gnl\|CDD\|259853	cd13831, HU, histone-like DNA-binding protein HU. This subfamily includes HU and HU-like domains. HU is a conserved nucleoid-associated protein (NAP) which binds non-specifically to duplex DNA with a particular preference for targeting nicked and bent DNA. It is highly basic and contributes to chromosomal compaction and maintenance of negative supercoiling, thus often referred to as histone-like protein. HU can induce DNA bends, condense DNA in a fiber and also interact with single stranded DNA. It contains two homologous subunits, alpha and beta, typically forming homodimers (alpha-alpha and beta-beta), except in E. coli and other enterobacteria, which form heterodimers (alpha-beta). In E. coli, HU binds uniformly to the chromosome, with a preference for damaged or distorted DNA structures and can introduce negative supercoils into closed circular DNA in the presence of topoisomerase I. Anabaena HU (AHU) shows preference for A/T-rich region in the center of its DNA binding site.	3.35351e-29
NZ_CP012109.1\|WP_002635482.1\|6945971_6946838_+\|DUF2058-family-protein	gnl\|CDD\|240291	PTZ00146, PTZ00146, fibrillarin; Provisional.	0.000104899
NZ_CP012109.1\|WP_044889472.1\|6920710_6921460_+\|endonuclease-III	gnl\|CDD\|223255	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair].	3.82835e-91
NZ_CP012109.1\|WP_044889373.1\|6942718_6944239_+\|peptidase-M3	gnl\|CDD\|341049	cd06258, M3_like, M3-like Peptidases, zincin metallopeptidases, include M2_ACE, M3A, M3B_PepF, and M32 families. The peptidase M3-like family, also called neurolysin-like family, is part of the "zincin" metallopeptidases, and includes the M2, M3 and M32 families of metallopeptidases. The M2 angiotensin converting enzyme (ACE, EC 3.4.15.1) is a membrane-bound, zinc-dependent dipeptidase that catalyzes the conversion of the decapeptide angiotensin I to the potent vasopressor octapeptide angiotensin II. The M3 family is subdivided into two subfamilies: the widespread M3A, which comprises a number of high-molecular mass endo- and exopeptidases from bacteria, archaea, protozoa, fungi, plants and animals, and the small M3B, whose members are enzymes primarily from bacteria. Well-known mammalian/eukaryotic M3A endopeptidases are the thimet oligopeptidase (TOP; endopeptidase 3.4.24.15), neurolysin (alias endopeptidase 3.4.24.16), and the mitochondrial intermediate peptidase. The first two are intracellular oligopeptidases, which act only on relatively short substrates of less than 20 amino acid residues, while the latter cleaves N-terminal octapeptides from proteins during their import into the mitochondria. The M3A subfamily also contains several bacterial endopeptidases, called oligopeptidases A, as well as a large number of bacterial carboxypeptidases, called dipeptidyl peptidases (Dcp; Dcp II; peptidyl dipeptidase; EC 3.4.15.5). M3B subfamily consists of oligopeptidase F (PepF) which hydrolyzes peptides containing 7-17 amino acid residues with fairly broad specificity. Peptidases in the M3 family contain the HEXXH motif that forms part of the active site in conjunction with a C-terminally-located Glutamic acid (Glu) residue. A single zinc ion is ligated by the side-chains of the two Histidine (His) residues, and the more C-terminal Glu. Most of the peptidases are synthesized without signal peptides or propeptides, and function intracellularly. There are similarities to the thermostable carboxypeptidases from Pyrococcus furiosus carboxypeptidase (PfuCP), and Thermus aquaticus (TaqCP), belonging to peptidase family M32. Little is known about function of this family, including carboxypeptidases Taq and Pfu.	0.00670943
NZ_CP012109.1\|WP_002635495.1\|6931365_6931992_-\|glutathione-S-transferase-N-terminal-domain-containing-protein	gnl\|CDD\|166036	PLN02395, PLN02395, glutathione S-transferase.	9.27693e-45
NZ_CP012109.1\|WP_002635500.1\|6919650_6920676_-\|low-specificity-L-threonine-aldolase	gnl\|CDD\|178323	PLN02721, PLN02721, threonine aldolase.	8.37971e-140
NZ_CP012109.1\|WP_044889375.1\|6918506_6919511_-\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	1.39904e-30

>NZ_CP012109.1|WP_002635492.1|6933847_6934696_+|hypothetical-protein
MSLRSLVLIALCVSTTSLAQPAEDLRDVMSARAYGMGGAYRALGLGGDAMLGNPAAMVLFPSYRLEGTGGWDVEKKEGQLGVSVIDAATSRLGMGLDYHWVSVGRGGARASAHMSSLGVGLPVSEMLMLGATVRYLRMSGQSRFANSVTGDAGIILRLSQQLMAGFSAHNLVDTGNEELTRYYSAHVGVMTGLLTLAGDVRADFTTNDATTFTYHGGMEYILGQVFPFRAGYTYDGFTRTSQLSTGLGFMSEGGGGIDVAYRHDLGGPKGRLLALTIKLNMN
>NZ_CP012109.1|WP_002635493.1|6932884_6933787_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MASKTPKVEPLIRKCVIPAAGLGTRFLPATKAVPKEMLPIVDTPTLQYIVEEAVSAGIEDVVLINGRGKSSIEDHFDIGFELETTLRSRGKEGEADKLRAIAELVRVVSVRQKEPKGLGHAVLCAKSVIGNEPFGVLLGDDMIDAEEPGIRQLARVYRQYNQAVIALMEVPDDETHMYGIAAGTDLGDGVMRIERIVEKPKKGTAPSNLAVIGRYVLPPDIFPILENQTPGVGGEIQLTDGLATLQQQQGLLGYRFKGQRYDAGDKVGYLKANIAYALKRPELRSGLLEFMREVVKTEKP
>NZ_CP012109.1|WP_002635494.1|6932132_6932888_-|hypothetical-protein
MKRTVALLAVLVSFAAGAYVLPGSSIIRRMAAERAEQRLSTLRVEGSLSFGGASVKEAGAALGTPTDRPEVQGDGVLSIRTPGRCRFEASVADGSTPSAVVQSGGRRKAQGTEIPAMSVLVAQVCPLLATGSGNVQEVKESVLRHLQSLGVETGRTGLARLGGEVAYVLGEMAEGRPQFWVYKDSFRPARLRYTDASGTAWDVRFLDYNSPATGELMPRTIEVWRGGQRNLRFTALKGDNRASLPDALFTL
>NZ_CP012109.1|WP_002635495.1|6931365_6931992_-|glutathione-S-transferase-N-terminal-domain-containing-protein
MKVYGHPMSTATRMVLTTLAEKGQEAELVLIDLAKGEHKQPAHVERQPFGVIPAFEDDDGFRVYESRAIIRYLDRKLPGAALTPSDARAFAAMEQFISVEHSYFTPAAMKVIWERLFKPFFGGGAADEARIDEGMKGVERVLGLVDPVLSKQPYLAGDGFSLAEVCWMPYMDFFVAAGGGTLLGQYKGVASWWERVSARPSWKKVTGA
>NZ_CP012109.1|WP_002635496.1|6928846_6931099_-|primosomal-protein-N'
MRAEVSAPVLASIAVGRPVRGEFTYTLPEELAGRLEPGQRVLVPFGRGTALGFYLGPASPPPGEKVRLKAVQRVLEDSPSLPKDLIALLRFAAVHYRYPLGEVIRGALPPGLSKAVEEKEAKPDVQHFAVALVNEVPPELSRAPAQSAALAYLLAVGGRAPLEEVAHAIPGARETLKKLATRGFAKLEEKTVEAGVKEGLIQGRPDHLTPEQAAAGVELRAALDAGAFQPFLLHGVTGSGKTEVYLRAAEHALTLGKGTLILVPEIALTPQLVGRFRSRFGSEVAVLHSALKDRERLFHWQALRRGDVKIAVGVRSAVFAPVNNLGLIVVDEEHDPSFKQEEKLRYQARDLAVVRGKQASAVVVLGSATPALETLENVNRGRYRLLELKRRVDDRPMPSIEMVDLRLERPREGVVTEEAPILSPPLLAAMEETIGRGQQVILFLNRRGHSTVLLCEVCGLSLKCSECDVCLTHHRSQSRVVCHYCGLAMPVPEQCLECTGPMLKLGIGTERVEAEVLERIPTARVARLDRDSATSAERLTEMLASFARRELDVLVGTQMVAKGHDFPGVTLVCVVMADTSLSIPDFRAAERTFHLLTQVAGRAGRGKDPGRVLVQTYNPDAEPVRRVLAHDFSGFSTQELEWRKALAYPPYSRMAAVRLEGEHPEQTASVARSLGNLVSRNMPPASAGVRLLGPALAPISRIRGKTRWQFLLKGPTHTALAPLLARVEAALAEVPSTVKVVIDVDPGAML
>NZ_CP012109.1|WP_002635498.1|6921419_6921947_-|peptide-deformylase
MVREILIWPDPVLKQKAKPVAKVDDSIRTLVKDMFETMYSAEGVGLAAPQIGVLQRVIVLDTTHAQPELKPVAMINPEIIAMEGDTTYNEGCLSIPGESADVDRAAAVTVKFLDPDGNEQTLRCEGLLSIAVQHEADHLNGTVFVDHISSLKREFIRKRMKRLKTSREQGASASP
>NZ_CP012109.1|WP_044889472.1|6920710_6921460_+|endonuclease-III
MLGLLAGVTYNGAVPGRETVAEKRKRALTVMDRLAADMPDARIELDYRTPLELLVAVMLSAQCTDKRVNIVTPALFQRFPSAQTYAEAEPSDVEPFIRTCGLYRAKAKNIVAAARTLVAEHAGQVPLKRDTLEKLPGVGRKTAGVVCIHLGGDDAFPVDTHVKRLAYRLGFTTKEDPDKVEADMQAVLPSERWTLGHQLLVWHGRRTCFARSPDCARCVVADLCPKKGVKAAPAEAATEKPTRPARAKS
>NZ_CP012109.1|WP_002635500.1|6919650_6920676_-|low-specificity-L-threonine-aldolase
MKRIDFRSDTVTQPTAAMRRAIADAEVGDDVYGEDPTVLRLEARVAELLGLEAAVFVPSGTQANQLAIGAHCRPGDEVLTEAGSHILHYEGGAVPALWGVQPQPLPGQRGLLTPEAVSAAVREDNIHNPRTRLLSLENTHNRGGGAVWPVERFQAVVEAARKAGLGVHLDGARLFNASVALGVPVSAWASRTDTTAVCFSKGLGAPVGSALVGRVDLIREARRLRKRLGGGMRQAGILAAAALYALENHVSRLADDHANARRLAAGLAELPGVTVDTASVETNMVFAEFPQAAHEVVALLERHGVLTNPAGAPRTLRLVTHLDVSARDIDEALSRIRRAVA
>NZ_CP012109.1|WP_044889375.1|6918506_6919511_-|M23-family-metallopeptidase
MRRLSLFALLTACACANRGAEPKMSFEELYASAPSRSPGQGAEGAALRVRHRVPESSSELHATLATFSTQAQALRQQVARGGVMPAAQVENWEQVTLALDGFLLRPVARVDSSDLLRAQSLLETELERDGFTYGDIPATLAEAVVLRVGRLAVRTAELRRLEQPPVAAEDLPPRFSWPLEPVSVTSLFGYRWHPVTGVHRRHLGIDLKATQGQLIFSADKGVVLRAGRNGDHGLQVEVQHEGRWVTRYSHLSRILVDAGEVLERGNAVGMAGETGLATGVHLHFELWLDGQPMDPLEALGDAEPPPEPAPPVARGPAVGYPAKHQGRLLSEERP
>NZ_CP012109.1|WP_002635502.1|6918215_6918485_+|HU-family-DNA-binding-protein
MTKAELVEVVAAQTRLTKKSAAQILDIVFTNIGKAVKKDARFSYPGFGTWSVRSRKARKIRNPQTNEMMKLKASKTIGFRPAKELKNSL
>NZ_CP012109.1|WP_162492074.1|6936598_6937195_+|hypothetical-protein
MPVQSRFRGPKQGYAVQVRERFQRQMPGYAVPVQARFRGPKQGYAVRALPHFRRPRPGCAARARAHFRGLKQGCAAQALPHFLKPMQGYAARAPVRFQEQTADSSARALPHFLKPMQGYAAQAPGRFQAQTQHSWTPNPPTLQKALGCAARAPVRYQAQRRDCAARALVRSRAAMRGRVTRALMESSQQRPPLGPSWT
>NZ_CP012109.1|WP_049872397.1|6938203_6940597_-|hypothetical-protein
MGGVRNGKNAGTPEHAAVRQEALQPGASGGKAAVDTSEVVDGHIRAAARLLREGSAARAFGELARASRGLSMTPRLAAGIVRMALLAGTEAAAIITLEAAPTAAFSRRAVHRQLARVLRRVEQVPRAIAALEALLLEWPDDRRAQRVLQVLRARASGGGGVVPEEGATSTQGVLAKLPVRKDGAPDAASWEYDDRVYLIETVIGPPLTVATPAGGQGASPTGAATRAEASVVVEGGGAQGGSRTSATELPSVVIAVEAAPVGAPRKSATELPEVETPLVGSEPKVSGPRTSAAELSAAGLPPVASESRASGPRKSATEFPVVETPPVGSESKVSGPRKSATEFPVVETPPVVAEPEVRGPRKSATEIPVVETLPVVAEPQVSGPRKSATEWPSVGASPAPAVSRPGGSRKSVTELPAAELSSSASDAPTNPARKSVTELPAAELASGDTSEATRQSATESSVVATPSGDSVAHASGSNVSATETPSERKPPVAAGSRSMAVPPGGAAPELEGVEAQVPATGVASPSTSLESHKTVLELPAINIPVAQAPRTLVELPAISVPPRALDFEARKTEVEMPALGADVLVPRTEPAREFAFKSEALSVPWTDSPDDDGPTALRSSQPAATWHDASASDEVTSEAQPFHLADAPPPVPPRASAPAKAERRKTPVASEALPAAVASKVDPAVDSRSGTMEVSLAELEAALSGGPATASSVAAPAEPRSSTHEDDNDEVTRSQKVEAQLIARRAWAELAQLYLKRADQAKDASRRAEALTRLAEVMENELHDPRVPRGCTGKSST
>NZ_CP012109.1|WP_002635487.1|6941642_6942587_-|RluA-family-pseudouridine-synthase
MKRRTFRVEGALVGKAVDAAVASELGLAEARARELVGVGAVYVAGKRSRDAKARLVAGQVVTVVLEEGGQSALAEAAPAPELRVLYEDADVIAVDKPAGVTAQPTEGRVGGSLVDLVGEKLGRPAGLVHRLDRETSGVTVFGKSAEATSALAAEFREGRARKRYVAVAGPGLPLNGTVDLPLSKDPSRPGRWRATRAANGVPALTDFHTLFSGPAFCVVELLPHTGRTHQLRAHLTALGAPILGDARYGGLPRAGGVEAARCLLHAQALELGHPRTGKVLRVEAPVPEDVMRFFAAAGLAALTGPIRAWGPEGA
>NZ_CP012109.1|WP_044889373.1|6942718_6944239_+|peptidase-M3
MDRPLHSVRTRLDEFLAELATLHYRNGAGLPPESSAAELLAAFPELSSPDTFSAANEALAKARSRNDALTVRRIQLVREVVASHVEDALATRHVDAIATLESQARLTADDQTYAFGEALARIPREPGRGRRALLERATGEFLWQNRTRYGDRREAALQAAEQLGAKDYPALRQDVTGIDYDALAESAQRMLVKTEDAYRDVLAYVLKKVDPLLRPLPSGDARRHDLQTALQAPWMDGFFRREDAFPAVVRWLGEWGLTPNAGGRIRIDDEDRPGKASRPFVAVVRVPNDIRLVLQPRGGLDGLAGLLHELGHAQHRAHVSDTLPMELRRLGDASVTEAHAAVFERVLLSSEWHKRYLGLPTMAARDTVRLAAFQALTLLRRHAAKLSYELSLTRKGASAERADEYADGQRHALFVEPHPGFFLHDVDPQLYVAHYLRSWALETQLTARLTERFDEDYWRNPAAATWLKGLYARGGTDDAEGLATETSGTPLALPEAGERLVAILNR
>NZ_CP012109.1|WP_021781024.1|6944257_6944602_-|hypothetical-protein
MERKVGSSTVTAKEVKAALEKTRTLSAEEEKVLRMRHGAGASSSRAPLARAAGDNAELADELLLIEMQLMKAMRARAGAKPAASASKPVAATRARDAAANPTKDKIVRALRKKK
>NZ_CP012109.1|WP_002635483.1|6944840_6945866_-|hypothetical-protein
MSRLKKSAFTFAVALAAAGCSDPVDKAAKARIFSPEDPPKVVASAQQKLPPEDVADNPQVARRILGMDAAEVTERLGPHRYQATLGYEWTSEASIPVKLTETRTFRAGPGGVSGDFHGVLENSRDQGLEVMRVGGQVFARNRYGPYRQRLRDRGMAERTRAELTGAIRDFDGLFQGRLKLTPEGTVTHEGRTAWRYIVTLAPATEGDASRPLPPSPQAKKGADETTVRRANFFAHRLPRSLDGEVLVDAATSVVLKARLDGRIGVPGEKTSEAAELRMTLEAVLSEVGKDPKLQPPEEFLPDADKPQGIADALDTFGLKRKKGTDAAGSDAPPEPEDEEGT
>NZ_CP012109.1|WP_002635482.1|6945971_6946838_+|DUF2058-family-protein
MQNLRDKLLKAGLVSEEQAKKVETKPSQAEARRSGPQEGGRSGANRPPPRRDDNRTQGGPPRGEGGGGGRPSGGRDAGRREGGGRPSGGGFGPPRHGGGPQHGRPAPTERAIPKLPPMPGSKAYQRAESKRQVELDRALRELVLGSQIPVEAGETAFYFMTRKGKLRRLELSPAQAKQLEEGELGVVERPEPAQIEHSLVPSSAAEQMFALSKKSVRFLNRKENPVGFMNDEELKAQQAAEASGTAVETPDEPEGEADAAPEAAETSEAPAEGDAAEPAPGSDDAKNG
>NZ_CP012109.1|WP_002635480.1|6947213_6947975_+|SDR-family-oxidoreductase
MTTTQKTVVVTGASRGIGRAVALAFAKQGHDVWALARSADALASLQKEGGERIRPHAVDVADEAALLAATQRILAEGPPRVLVNNAGITVSAPLTKTRTEDLARVMAVNVTAPFLLCRELMPSMAKAGGGRVINIGSMAAVRGVKYTSAYCASKHALLGLTRALATEYAKKHVTVNIVNPGWVETDMFAGATSAISATTGRSEEQAREALASMNAMGRIITPEEVAALCLFLASDAAGGITGSAYAIDGGEVG
>NZ_CP012109.1|WP_044889372.1|6948027_6949665_+|PQQ-binding-like-beta-propeller-repeat-protein
MCCAGGIPSPLCATTLATSGGVGRCQEAGVSRLRSVVLGACLWAGCSSPEDAASASAESPPGETQTPSSEGSTSEPAPGPTPAPQTPAPSAATACSGPEGTARLAWSHDAAWNHTVDFRGTMDADGNTYWTECESSYWVDKDPSQLDCQLVSVTRDGAMRYQRALPPPGAWAVHTVDGGQLFVTGRLALLTAMDSATGQVRWSVSLGAVKDTNPEAHHALRVESLVRSPPYLVAVVHDTFGDVGAEDLLVAVHADTGAVAWQVRMPPIYAPLVVDTDGNIYAGASDVLEQTTELFSFSSDGQLRWRTHREGVLDPTAVDDGTLLLGRSELVDAATGAPRATLATASAESFDYSLGRSSSPFGRAAMQAGRMLVLPDLQCTTEGCPTTTHPGDTFLYGLDVESGAVKWHRAVGAWPMSPLLTQRDSLLLVDRPVEAQCGENICTGEDAGIGTFLRELDLDGQELSACALPGKAPYITPPALHQGRVVLGAWTNWNAENDWTQRMSIRAFDLATPTEPATGGWVSAGGGNTRSGQAKPEAAPAQALR
>NZ_CP012109.1|WP_002635478.1|6949661_6951488_-|HAMP-domain-containing-protein
MTHSLAARLTTALSLVILGLSALSVGLTSISLRSWSHEVLTSRLAQDESAWSRVVAHEARELTALARVTAANATLSSLLSRDAADSSQLQAELRAQQALMGVDLLVVLDAAEGVRASLASGSVAGLASLVKQGEPRVVLVGGVPHHAVSRPVEAGGRTVGSVVLGRVLGEQALLALRDERGVEGVLTVEETPVAHALSAVSSESLLAALSGKGRPDSVKVSGVSLHLRRVDVGPGVELLLTRDTWKEAAQYRVSLLLVVLLGVALTAAAGTAIFVLVRRMTEPLRELTAATARMVSEGDFRARLEVRSKDEIGQLASSFTELMAQLRELLMALQHSSVQLETASTELTESAAVQNEAVSQQAVALHETQIAAQQLQEASRAAARRVDVILREADKASGFGEAGEAAVSGSVGGLTHIRSHVEHIGRTIAELHQRTRQVGDITRTVKDLADQSNVLALNASIEAARSGDSGRSFAVVARQMRSLADQSAGATTRVQSILSDIGRAISQTVSTSEGGAREVEGGLEQVRAAGESLRSLAGIIQNNGKTVRSIAEAVSQQDAGIAELFAALSSMADLADQIVDRMAASEQSAIQLSAASAELSAIVGRYRL

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Crispr_ID: NZ_CP012109_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_19

7608535-7608645

Orphan

Consensus_repeat	Method
GCCGGGCCACAGTCCTGCGGGCACGTGTAGGACGTCTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_19

>merge|NZ_CP012109|19|7608535-7608645|CRISPRCasFinder
GCCGGGCCACAGTCCTGCGGGCACGTGTAGGACGTCTCCGCGCCATTGCAGATGCCATCACCACAGATGGGCGCCGGGCCACAGTCCTGCGGGCACGTGTAGGACGTCTCC

>NZ_CP012109|19|14|7608535-7608645|CRISPRCasFinder
GCCGGGCCACAGTCCTGCGGGCACGTGTAGGACGTCTCC	GCGCCATTGCAGATGCCATCACCACAGATGGGC
GCCGGGCCACAGTCCTGCGGGCACGTGTAGGACGTCTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002635593.1\|7618464_7619349_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002635609.1\|7598155_7601284_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226220
NZ_CP012109.1\|WP_002635604.1\|7606009_7606495_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044889271.1\|7616669_7617224_-\|chalcone-isomerase-family-protein	unknown	unknown	gnl\|CDD\|374318
NZ_CP012109.1\|WP_021780980.1\|7609108_7609807_-\|DUF2490-domain-containing-protein	unknown	unknown	gnl\|CDD\|378471
NZ_CP012109.1\|WP_002635592.1\|7619526_7621740_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239163
NZ_CP012109.1\|WP_002635596.1\|7615734_7616538_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|236356
NZ_CP012109.1\|WP_002635594.1\|7617364_7618369_-\|ketoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|238426
NZ_CP012109.1\|WP_002635606.1\|7603942_7604599_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP012109.1\|WP_144429787.1\|7607314_7607989_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002635599.1\|7610932_7612189_+\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|212673
NZ_CP012109.1\|WP_002635608.1\|7601302_7602481_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP012109.1\|WP_002635610.1\|7596788_7598186_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_144429638.1\|7595765_7596704_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_144429642.1\|7606643_7607198_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_144429641.1\|7604585_7605938_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP012109.1\|WP_144429788.1\|7609961_7610741_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372724
NZ_CP012109.1\|WP_002635597.1\|7613079_7615695_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP012109.1\|WP_002635607.1\|7602473_7603793_-\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP012109.1\|WP_002635598.1\|7612210_7613077_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002635609.1\|7598155_7601284_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|226220	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism].	0
NZ_CP012109.1\|WP_044889271.1\|7616669_7617224_-\|chalcone-isomerase-family-protein	gnl\|CDD\|374318	pfam16036, Chalcone_3, Chalcone isomerase-like. Chalcone_3 is a family of largely bacterial members.	5.00455e-24
NZ_CP012109.1\|WP_021780980.1\|7609108_7609807_-\|DUF2490-domain-containing-protein	gnl\|CDD\|378471	pfam10677, DUF2490, Protein of unknown function (DUF2490). This is a bacterial family of uncharacterized proteins. They appear to belong to the outer membrane beta barrel superfamily.	4.66955e-39
NZ_CP012109.1\|WP_002635596.1\|7615734_7616538_-\|OmpA-family-protein	gnl\|CDD\|236356	PRK08944, motB, flagellar motor protein MotB; Reviewed.	4.19689e-39
NZ_CP012109.1\|WP_002635607.1\|7602473_7603793_-\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	5.71606e-24
NZ_CP012109.1\|WP_002635608.1\|7601302_7602481_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	2.90467e-22
NZ_CP012109.1\|WP_002635594.1\|7617364_7618369_-\|ketoacyl-ACP-synthase-III	gnl\|CDD\|238426	cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.	2.35876e-74
NZ_CP012109.1\|WP_002635599.1\|7610932_7612189_+\|Hsp70-family-protein	gnl\|CDD\|212673	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins. This bacterial subfamily includes the uncharacterized Escherichia coli YegD. It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. YegD lacks the SBD. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some family members are not chaperones but instead, function as NEFs for their Hsp70 partners, other family members function as both chaperones and NEFs.	1.29919e-162
NZ_CP012109.1\|WP_144429641.1\|7604585_7605938_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	9.88378e-43
NZ_CP012109.1\|WP_144429788.1\|7609961_7610741_-\|hypothetical-protein	gnl\|CDD\|372724	pfam13779, DUF4175, Domain of unknown function (DUF4175).	0.000335537
NZ_CP012109.1\|WP_002635597.1\|7613079_7615695_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	6.33418e-38
NZ_CP012109.1\|WP_002635606.1\|7603942_7604599_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.03051e-70
NZ_CP012109.1\|WP_002635592.1\|7619526_7621740_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|239163	cd02762, MopB_1, The MopB_1 CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. These members belong to the molybdopterin_binding (MopB) superfamily of proteins.	0

>NZ_CP012109.1|WP_144429787.1|7607314_7607989_-|hypothetical-protein
MEVHVKSRLVVLLSGLSLGLLAACGPVDMESEPLGQSEAEVGRFLCGDGFCDTRNGENGDNCPWDCNVLSFCGDGICNGRETVRSCPQDCGFLTFCGDGVCNPGETAQTCPEDCSILSWCGDGICGANESAQTCPQDCGPATFCGDGVCNGGETTASCWEDCGSFCGDGVCNGLETPRSCRADCMILNVCGDGLCAPGEELSCPADCCTGPRCPVIDPNPQPWP
>NZ_CP012109.1|WP_144429642.1|7606643_7607198_-|hypothetical-protein
MKTRLMVLMAGLSLGLFAACGPVEMESEALAQDEAALMSWCGDGICNPAWGETNESCPWDCPPVLYCGDNICSRFETPANCPDDCAYLLCGNGVCDPNESSQTCPQDCSPATWCGDGACNGGETSQSCPQDCGTATWCGDGVCNGWESTMDCWQDCGTYCGDGVCNGPERISNCKADCLIVIEP
>NZ_CP012109.1|WP_002635604.1|7606009_7606495_-|hypothetical-protein
MKTQLMAVMAALSLGLFAACGPVETESEPLAQDEAAMVECPCGGVGPWNCNPCAFICGDGFCDSANGESIHTCAEDCAPLPYCGDGFCNGGENHVTCSFDCAPPGAYCGDGICNGNETLQTCLDDCKYLTCGNGICEFHEFGWCTDCPICTGPGCPQVPQH
>NZ_CP012109.1|WP_144429641.1|7604585_7605938_+|HAMP-domain-containing-histidine-kinase
MEATNPSRPRDTLVRRLSRAMLGLALVSSALTAGATGLLAYQMLLTAEDRRLTDFAVDLVEEVAGLEDARAREEAIAEQEELRAFGVRISLFDGDTLLGGEPSIPPVSGCEWGRAPGEEHVRRCGVAAHGRLAVAEEVLESIPRIRTWLPLAVLLTSVGAALMSLVLSRRVARWAARPLTELGESLARIQPGADIPEPLHAEARYEEVNTVRAALVDLLGRLRAALEQSRRFSANAAHELRTPLATLRAELELESENPQPPATAAALARMHRTVTSLGTLVDRLLVLAEGTEGTLAPVETLSLADIVEDVVRALPEDARGRVDTDLQAPGLMQGDSQLLRQLVDNGVENALKFSGSGRVTVLLRETEGTTLLDILDEGPGIAREDSERVFEPFYRTPSARAGKPGNGIGLSLVALVARAHGAHAGFLPTSKGAHLRLTFPATRPDALAKD
>NZ_CP012109.1|WP_002635606.1|7603942_7604599_+|response-regulator-transcription-factor
MHVLVVDDHQELRALVTQALERDGHLVRQAADVEQARQAVIEEPDVIVLDVGLPDGSGLSLCRELRRDGIHIPILILTAHNRVNERVEGLDAGADDFLGKPFAIAELRARVRALGRRREKTSTVRVDLGDVVLDFGKREALRSGQAVPVTPREWAILETLASRGERVVSRDTLLESIWGEATTGAASSLEVLIGRIRRKLGDDVVITLRGEGYRLGSN
>NZ_CP012109.1|WP_002635607.1|7602473_7603793_-|TolC-family-protein
MAALACLMAMSGCASSPYDRAWVSKELASLAAPLGPEGAEVASLPPGTPETQLLDERTAVSIALWNSAALQSDMAQLGVSRADLAEAGALPNPTFSLLLPVGPRTLETSLLAPLFALWQRPSRVAAAKLQVEQVARGLVQNGLDLARDVRIAHTEWVLSEERREARDELSTLWGRTAELVEARFAAGDASQMEVAALRAEAQTAVDSARRARTDVVLARERLRLLMGVVQSPLFAEAQPRVEPWDERPLRPVDDLISLAQAARPDVRAAELGIEVAGGRLGWEKSRILQLFARLDTKPSTSASGAPQALWVPGVQLDVPIFNWNPGGIGRSEAELLRASARYVLLRQQVSNEVLMARAQVLQAAGSLEAFQSDILPAFTAASEGAQKAFDAGDLPYLQVLDALRRLADARLRALDIEADLRRALAQLDRSLGKQGVAHE
>NZ_CP012109.1|WP_002635608.1|7601302_7602481_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MSNLPRRIFFSSVFTLALACQAEKPPAPPPAAKVSGHVAESSLATVTLHPDAEKRLDLQVRPVARRSAARRHILGGEVVVPSGNALLVTAPVAGVVAAAGNEGALRPGAAVKRGDLLLRLVPLAMVDRDLRAQAQRAVDAARAREVAASARLARTERLLKDGAGTERSVEESRADHAVAQAELQAAQSRLDMVGRSPLEADVSMLVRAPRDGVLRQVAVAPGQSIAAGAPLFEVVGISANWVRVPLFVDEALRLKADAQVRVHALLTGRDEGVDALPVSGPPTADPLAATVDVFYELPANARFAPGQRVGVSLTLGDPAEVLSVPASSVVYDALGGAWLYVRKQEHVYVRSRVDVLRQEGTELLLARGPAVGTQVVVAGAAELFGTEFGAGH
>NZ_CP012109.1|WP_002635609.1|7598155_7601284_-|efflux-RND-transporter-permease-subunit
MRNLIAACLNFRLVPIAASVLLLILGYTSLRQMPVDVFPEFAPPLVEIQTEVPGLSSLEVEQLVTTPLENALAGVPALQTLRSKSVLGLSSVVLIFERGSDLFRARQLVQERLARIAPTLPVAARPPVMLSPVSATSRVLKVGLRSDTLDRMALSDMARWTIRPRLMGIPGVANVAIWGQRDRQYQVKVDPERLRAANVSLDDVLRVARDASVPTTGGFVDTPNQRLAVSLLSAASLEALKEVPVAFRNGASIRLADVATVEEGHPPPIGEGIVDDTAGILLIVEKQPWGNTLEVTEQVESMLEQLRPALEGVTIVPGIFRPATFIETALGNLQHAVVLGCVMVIVVLFAFLQNWRTAAISIVAIPLSLVGAIVALRMVGATIDTMVLAGLVLALGEVVDDAIIDVENVQRRLEENRALGSPRSMFQVVLDASMEVRSAVVYATVIVILVFLPVFFLEGVSGAFFRPLAVAYVLSVGASMVVALTLTPVLCMLFLTRKETHAPRLGGWMRDRVGPWVAWVLDRPKMALRSVVAVLVAGFALAALLGEGFLPHFQESDFLMHWVAKPGTSGDAVLRTALRASEELRAIPGVKHFGAHIGRAEVADEVVGPNFAELWISLDGVDDYAATVRHINEVVEGYPGLYRDVQTYLQERIKEVLSGASGSIVVRAYGPDLDALRSKAGELEAKLRTIPGVVNLKVEPQVLVPQLQVRLSPEAGRRLGLTPGDVQRAVATLLQGTKVGEVYIDERTIDVVVWGDDALRQDVAAVKDLRLMSASGAPVRLGDVASVEMASVPNIVQHEGASRRLDITCDPSGRALGAVVSDIQAVVSGMDWPAGHYAEVLGEYAERQAARTRLFVLSLLAVLGIAMVLYLDFQSPRLVAFTLGTLPFALVGGLVGVLMTGGVVSLGSLVGFVTVLGVAARNGILLVSHYRHLEEVEGVPFGRELVLQGTLERLQPMAMTTLTTALALLPLVAGGLKPGQEIEHPMAVVILGGLFSSAVLNVLLVPSLYLRFGRGSRPRDVDAARPEAPEVTAQGTTYSTGR
>NZ_CP012109.1|WP_002635610.1|7596788_7598186_+|hypothetical-protein
MRRRFECSILTGALALLPLGCGETPQEPPPPLPRAPDAELLESIAAAAERVRSDTCFREREDVSTCAWVASTHEPALDFAMTDSTGEAILIADDFRFVSPLMLRYRNRLRGVLRTTDDGTVATTQLTWHVPLRFHEVMTSFSGPDFIPAEWLRALRIPVDETYGARLGSGATHGNFVFALLVEANPQQPIVLWDDHGFRDVPLDAFCDTTGTPEALEPLREHARRKADSLRAYLDMYNVRFINYSRGTTVHTLRELWEHRCQAPAPANAVLLAKLKTEEPVLEVLFGSPGVFAAHAAGDVNSPEESPFDFPSERFPNRLRIGFFATLESGLDAMGRGPLEGLRGWPGPQAVDVYLNSGVAPVRPFAYSPTPLLHASDFGMDVIPITHTSTSWIAPLGLSRFIHLRESLHGGQPLTNERVASLIDAMVPRACAGQPEGRCQYQDPLLHGQTEAMRLGYRPVEYVVP
>NZ_CP012109.1|WP_144429638.1|7595765_7596704_+|hypothetical-protein
MTSTRTTPPLALMLSLLAAPGAALAWTPPSVPCAAATAPDHEQDSDCDGLPDHMEDLNQNGRVDIGETDPHKRDTDGDGASDLTEYLAGTDANRDAFLSFPEPMVFDLVRGLDSEKGELEFNTLFRLRPRSEGMLLQYAPEIEYAFGDGMAAELELPMENERVAALKTAVQFTFHVDPHRRWAHGIQVLAETKLHEKETDVALLHIGKVRLGERVSLVSISGVQGVHVRETGDLHAAALVNLSAFYAVAQQVIVGVETNMRLDDAMAFDWMVMPQAHVQLNHHARVQVGLGAVKGGPSNVEPMMSTRFIIEM
>NZ_CP012109.1|WP_021780980.1|7609108_7609807_-|DUF2490-domain-containing-protein
MRSEKWLPLIGLLLVVIPFRSVEAGRPVRAEAQLWYTVTAQGGIGDTFLYYLEAQPRFGKDDARAIFRSAAGVRMSHNMSLWLGQGWIPLWVWDGDPAQRQGESRLFQQYLYSPKLGSLRGTVRARLEQRFLPGTTEISHRARVMLRGAHSVAAEGRLSLIVWDEVFYHLNSVERGPSAGFDMNRVFVGAGWKYGEHSSVEVGYLNVFTRRPYAETEQLIHTLAVTMPFNYM
>NZ_CP012109.1|WP_144429788.1|7609961_7610741_-|hypothetical-protein
MAGAAALTLGTACQERDHGAQGQAGGQGSVSDQVAQAQKRTEGAFDSARKAQEQASDQQKQAAQAQQDFQKRQQELQQAQAKAQSASQQAEQAQQNAQQQTQQAQQEAQQAQAGALDAQRRQSEELTQQNQQARQQSEQLRQQSQQPVAAAPVPQGQQGSEQQVVGEVLSSNAQEVLLSSQGEPQLRLQLSPQTQVTVDGRQASAADIQEGSQVRASYRTDEQSGEPQAVRIEATSQVQPTAPAAPESGQSTPGAQPTQ
>NZ_CP012109.1|WP_002635599.1|7610932_7612189_+|Hsp70-family-protein
MRACGLDFGTSNTAAALPDGTVLSLQPHTQEARLFRSVLFFPDDEQDIYAGADAIQRYMEDNTGRFIQSVKSFLHSSSFRATQVKGRTYTIEDLVAVLLRRVRDAAADAMGGAPEAVVLGRPAVFTPDPEADALAQQRLQRAAGLAGFQHVQFLIEPIAAALAYEAQLTRDELVLVADFGAGTTDLTLMRLGPSRKDNPDRKQDVVGSTGVRIGGDRFDAEIMRHKLLPRFGAGSTYRVKGFSDKRMPIPQHIMAKLLTWHEMSFIREKSTQDLLETMLDTSDRKPEIQALYDLVMDNLGYRLFRAIEAAKVRLSKEDVATVDFEEARIHLHEPITREEFDTFSKPLLDELDACTASLLEKHAEAKDIDAVFLTGGSSQIPAVRQLYVRRFGEERVRTADAFTSVAEGLGRASAHLSA
>NZ_CP012109.1|WP_002635598.1|7612210_7613077_-|hypothetical-protein
MRLHLPAFVVLLLAGCGPDFELQSEIRRVRVLAIQAEPAELVVDPDAATLPGPMTFNALAVTPDARPVTVRYALCRFTGNPYDGRCPGDNGVPLPDGELSLQDPNVQTVLLEALQAGGGGGGVLDPEDPALRAALERGIPLFVGYEASDGSGTPEGTERGVRRVTLRATTAPNQNPVMADVLWNGAPLTGPLPVASEVTFTPVLAEGSVETYETAEGPQVEQVFFSWFATGDGEVKEFRSQEPVEGRPGDPTSLYETPAAPGRVTFWVVARDGRGGVGWLSRTVDVGP
>NZ_CP012109.1|WP_002635597.1|7613079_7615695_-|TonB-dependent-receptor
MRIFAAILCLLAASVSAQPRDAGVPEADAGAAPQGVLTRPPALIRQVEAVYPPEAAAQQLEGTVVMWVDISETGAVSNVEVSQPAGHGFDEAAVAAVRQFQFEPAEVDDVPTPVRIEYAYQFVFRPPPPPEGEAAAAEPEAPVNFSGRALERGTRDVLIGAEVVLPALERSAVTDEEGRFSFRGVPLGTHEVLVVQSGYERFRTQETFTEGQETRATYYVRKRIFGAFETVVRSERERKEVTQTTLQLAEVQRVPGTQGDTLKVVQNLPGVARPAFNGGQLVIRGSGPQESGVFLDGQRIPLLFHFGGLTSVYNSELLEAVEYLPGNFSAYYGDITGGVINVRSREPRTDRLHATVGVSLIESNAVVEGPITDTLSFAVAGRRSYIDLVLGLVPQGDSGPNLQVAPRYYDAQLKLVWKPKSRHTFTLQGLTSRDRLGLVFDRPADDDPTVTGGLNVTTGFNQLRLRHQYRADALTLDTHALVGNTLVQFGIGDRGLRIASTDLNLRSTVEYALGEQLTLAGGLDVVSNFARVTARIQGLSREGEPPTPTVTDDVLTADGDFLQYFPSTWVEARWRPVPGLLVVPGLRAESYVFTDQTEARRTFNPRLAVRYGLTDTLTLKGGAGVYHGPPVQDEPSVAFGNPDLRAKRSLQYSVGAEWQARPEWFIGGEVFYNDLDGLIVRSNATVVRNGQQVPERLSNGGVGRIYGLEVLVRRALTERLFGWVSYTLSRSERRDSPGVGWRLFDNDQTHVLTAIASYKLPAGWEIGARMRFASGNPTTPVVGSVRDDGSDVFIPLYAAVNSRRLPSFNQLDIRVDKNFAFEKWNLNVYLDLTNAYNNPAVEGITYNYNYTQSAFFKGLPILPIIGARGAF
>NZ_CP012109.1|WP_002635596.1|7615734_7616538_-|OmpA-family-protein
MRNRLVLAALVALSTTGCVSQGKFDAKALEAENFAKGLNDEKGAREAAEAKVKELEAKIAEVEQEREALNTRLNASESRLTANAAERRALEEKNSQLAALNDELARNSKKLAQAKEELEKRSSEYENLAQSLKQEISDGKIQLSELKGKMTVQLKDKILFASGSARVGKEGEEALTKIADALKTVQGKIIRVEGHTDDVPTGGGQFASNWELSLARAMAVVRSLQNAGVDPTFLSAAGYGQYQPIAANDSAENRSLNRRIEIVLAPK
>NZ_CP012109.1|WP_044889271.1|7616669_7617224_-|chalcone-isomerase-family-protein
MGTRAWAGTVRCFVVSAMLVAGAAEAKQRQVGGVHMPQSMSLKGRTVELAHMELHKQLFFKVYVWSLYMEDRPRSTHEAVSSNSVKRLHFRFLRNISRDQLVGSFRSGLGHSPDLRQGPLADHLSIMLASLKDVQKGEDLVITYTPGVGLEVGGDASGGVFIPGKPFADALFAVWLDSHPIFPR
>NZ_CP012109.1|WP_002635594.1|7617364_7618369_-|ketoacyl-ACP-synthase-III
MFLHALGHFHPPNLLTNAFFEELGLETTDAWIVERVGIHTRHTVLPLDYLRETRNRDVRAAQEAALFSNAETGRRAALMALDRAGLKPSDIGLVVAGGCSPDECIPAESNRVAQLLNIDAPAVDLQSACSSFCMQLHFLTGMRPERLPDYVLVVNMDNSTRVVDYTDRASSVLWGDGASAAILSPRVPGRWHITETLLAGDPSGADKVRVPRMGHFTQHGGEVQKFAIRRAGETFQALRTRFMARHPHLGAEAVTFIGHQANLRMLESVQRRCEVPDARHFFNVNTRGNTGAAGAPSVLSEHWEDASVGDAVVLSVVGSGLTWAGALLERARPA
>NZ_CP012109.1|WP_002635593.1|7618464_7619349_-|hypothetical-protein
MHRVIPFVVSMGLLLAPLAARAQAPTIQFKRGDLRVGSANVTENAVDLRLALDLRAKDMAEPLKVAVSASSTQRYTTTVLAAKGQVAHKVRVAFDDVVEVSQQQGESQRKVSPVSGKTYVAELRKEGLTITQASGKPVPEGEQAEVKKSLPKLGKPDEMAAAFPSTPMAVGATLDGFSDALARQLVDDSSEKTTRVTEARAKLVEIRQESHGLAGVFDVSMSLSREDASTPIVTTIPLKGQMTVLAKGVRLLDLTLSGPVAVALTEDAVEHGFQGKGDGEMRLRTGIRAADTPR
>NZ_CP012109.1|WP_002635592.1|7619526_7621740_+|molybdopterin-dependent-oxidoreductase
MSASASPQVHYRTCNLCEAMCGLRIELDAGRITSIRGDASDPFSRGHLCPKALALQDLHEDPDRLRTPLRRTATGWEPVSWEVALEETARRLHAIQQEHGRDAVGSYLGNPNVHNLGNMMFVPELLRTLRSRNRFSATSVDQLPHQLAAFLMFGHQLMVPIPDIDHTQYMLVLGANPLASNGSLMTAPDVRTRLRGIQQRGGRVVVMDPRRTETAAIADTHVFIRPGTDALALLALLHVAVVEHAPRLGPLDAITDGLEAVCAHVRDFAPEKVAPHTGVPAKTLRRIARDFLSARSAVCYGRVGLSTQAFGALCQWLINVLNVVSGNLDRQGGAMFTLPAFDIIGGPRALAMSRGGFGRWKSRVRGLPEFSGELPSVAMAEEMLTPGTGRVRALLTVAGNPVLSTPNGARLEEALAGLDFMVSIDPYLNETTRHAHFILPPVSPLERGHYDIAFHALAVRNTAKYSPPLFEPGPEGRQDWQVLLALQHRLETLRKGRPSLRATLKYQALSRMGPERLLDLGLRMGPYGARTTHGNHGLSLAKLKASPHGIDLGPLQPCLPRRLQTKERRIHLAPEPLLADLRRLREAFPDTAARPVNTGELLLIGRRHLRDNNSWMHNIPGLLKGKPRCTLLMHPEDAACRGLNDGMEATVTSRVGTVTVPVHVTDEMMPGVVSLPHGYGHARAGTRLPVATAHAGASHNDLTDEQAVDALCGTAAFSGTPVRVLRAAAPGPATPAG

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Crispr_ID: NZ_CP012109_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_20

8321659-8321764

Orphan

Consensus_repeat	Method
ACTCCGCCGCGTGGGCGATATGCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_20

>merge|NZ_CP012109|20|8321659-8321764|CRISPRCasFinder
ACTCCGCCGCGTGGGCGATATGCCTCTCGCGAGGCCACGCCGCCAACGTCACGAACCGCATGCGTCGCTACCGCCCACGCCACGCCGCCGCGTGGGCGATATGCCT

>NZ_CP012109|20|15|8321659-8321764|CRISPRCasFinder
ACTCCGCCGCGTGGGCGATATGCCT	CTCGCGAGGCCACGCCGCCAACGTCACGAACCGCATGCGTCGCTACCGCCCACGCC
ACGCCGCCGCGTGGGCGATATGCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002639701.1\|8316220_8317336_+\|DNA-alkylation-repair-protein	unknown	unknown	gnl\|CDD\|226785
NZ_CP012109.1\|WP_002639686.1\|8330679_8332206_+\|response-regulator	unknown	unknown	gnl\|CDD\|223715
NZ_CP012109.1\|WP_002639704.1\|8312526_8312919_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002639706.1\|8310930_8311740_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376777
NZ_CP012109.1\|WP_044890186.1\|8317837_8318560_-\|double-CXXCG-motif-protein	unknown	unknown	gnl\|CDD\|370549
NZ_CP012109.1\|WP_044890187.1\|8318566_8319226_-\|TIGR02269-family-lipoprotein	unknown	unknown	gnl\|CDD\|370548
NZ_CP012109.1\|WP_044890188.1\|8319715_8320339_+\|DUF1990-family-protein	unknown	unknown	gnl\|CDD\|378157
NZ_CP012109.1\|WP_002639696.1\|8320344_8321619_+\|DUF1990-family-protein	unknown	unknown	gnl\|CDD\|378157
NZ_CP012109.1\|WP_002639693.1\|8324573_8325068_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002639698.1\|8319304_8319598_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002639695.1\|8321870_8323151_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044890189.1\|8325089_8325701_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002639687.1\|8328638_8330687_+\|response-regulator	unknown	unknown	gnl\|CDD\|274362
NZ_CP012109.1\|WP_002639690.1\|8326488_8326974_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP012109.1\|WP_002639703.1\|8312920_8314063_-\|DNA-replication/repair-protein-RecF	unknown	unknown	gnl\|CDD\|234608
NZ_CP012109.1\|WP_044890185.1\|8311736_8312288_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002639688.1\|8327937_8328642_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002639694.1\|8323236_8324343_-\|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl\|CDD\|235541
NZ_CP012109.1\|WP_002639689.1\|8327267_8327930_+\|cobalamin-dependent-protein	unknown	unknown	gnl\|CDD\|227345
NZ_CP012109.1\|WP_002639691.1\|8325700_8326492_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237558

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002639701.1\|8316220_8317336_+\|DNA-alkylation-repair-protein	gnl\|CDD\|226785	COG4335, COG4335, DNA alkylation repair enzyme [DNA replication, recombination, and repair].	1.82146e-46
NZ_CP012109.1\|WP_002639686.1\|8330679_8332206_+\|response-regulator	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.17071e-54
NZ_CP012109.1\|WP_002639706.1\|8310930_8311740_-\|ABC-transporter-permease	gnl\|CDD\|376777	pfam02405, MlaE, Permease MlaE. MlaE is a permease which in E. coli is a component of the Mla pathway, an ABC transport system that functions to maintain the asymmetry of the outer membrane. In NMB1965 it is involved in L-glutamate import into the cell. In Arabidopsis thaliana TGD1 it is involved in lipid transfer within the cell.	7.65066e-77
NZ_CP012109.1\|WP_044890186.1\|8317837_8318560_-\|double-CXXCG-motif-protein	gnl\|CDD\|370549	pfam09535, Gmx_para_CXXCG, Protein of unknown function (Gmx_para_CXXCG). This entry consists of at least 10 paralogous proteins from Myxococcus xanthus and that lack detectable sequence similarity to any other protein family. An imperfectly conserved CXXCG motif, a probable binding site, appears twice in the multiple sequence alignment.	1.01304e-126
NZ_CP012109.1\|WP_044890187.1\|8318566_8319226_-\|TIGR02269-family-lipoprotein	gnl\|CDD\|370548	pfam09533, DUF2380, Predicted lipoprotein of unknown function (DUF2380). This family consists of at least 9 paralogs in Myxococcus xanthus, a member of the Deltaproteobacteria. One appears truncated toward the N-terminus; the others are predicted lipoproteins. The function is unknown.	3.38183e-93
NZ_CP012109.1\|WP_044890188.1\|8319715_8320339_+\|DUF1990-family-protein	gnl\|CDD\|378157	pfam09348, DUF1990, Domain of unknown function (DUF1990). This family of proteins are functionally uncharacterized.	1.57493e-06
NZ_CP012109.1\|WP_002639696.1\|8320344_8321619_+\|DUF1990-family-protein	gnl\|CDD\|378157	pfam09348, DUF1990, Domain of unknown function (DUF1990). This family of proteins are functionally uncharacterized.	2.04247e-23
NZ_CP012109.1\|WP_002639687.1\|8328638_8330687_+\|response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	3.00108e-54
NZ_CP012109.1\|WP_002639690.1\|8326488_8326974_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	2.14943e-16
NZ_CP012109.1\|WP_002639703.1\|8312920_8314063_-\|DNA-replication/repair-protein-RecF	gnl\|CDD\|234608	PRK00064, recF, recombination protein F; Reviewed.	4.66686e-107
NZ_CP012109.1\|WP_002639694.1\|8323236_8324343_-\|DNA-polymerase-III-subunit-beta	gnl\|CDD\|235541	PRK05643, PRK05643, DNA polymerase III subunit beta; Validated.	1.26739e-156
NZ_CP012109.1\|WP_002639689.1\|8327267_8327930_+\|cobalamin-dependent-protein	gnl\|CDD\|227345	COG5012, COG5012, Predicted cobalamin binding protein [General function prediction only].	7.12676e-26
NZ_CP012109.1\|WP_002639691.1\|8325700_8326492_-\|hypothetical-protein	gnl\|CDD\|237558	PRK13920, PRK13920, putative anti-sigmaE protein; Provisional.	0.000721281

>NZ_CP012109.1|WP_002639696.1|8320344_8321619_+|DUF1990-family-protein
MIEWRWFSGWTEAEMVPRLAKARTLERNFPEVSGEMTLEAGWSQVRSESVLGHEAPGRPVPGSLFERAQQVLETFDFSDPRIVAWHFSAHEPLQGRTVLLELRSLGQKLRYLCGARVGGTREEHGDTCSIYGFSFETLHGHIEAGREWFLLRKNHESGAVSFHIEAAWRPGQFPNWWSRLGFAMVAPRYQRAWHRLTHVRLRELVLKHPELVGHHASSGQLEHSGHDVKTAPVQFYAQRARGHRETQLEEETEAMNRGHGLTALGMGILAGMRSMSAPTLASRWLATTQPPPEDRLARAMAHPWAPRVLGLLAVGELIGDKLPMAPARVMVVPLTGRMLSGALAAASVTPERQRGRRLAVAALGAVAALASSWAFYALRRTATKKLGVPDVAVALTEDALLAGLASRLLPTFEAPTGRVVTLPT
>NZ_CP012109.1|WP_044890188.1|8319715_8320339_+|DUF1990-family-protein
MASGSMHTDAGQADELQLPEEGAGPLLQRDYWAVIRNSQASPSELMHWVAQRFPEFAPSDICVFEHRRPVSANAPLRMDDELTVKIHGAGTFGVRVIHLDDQSFTLGTLHGHPEAGRITFGAYRNLRGDVIFHIRSRARSGSTFHYLGFVTAGDAMQTNTWTEFVLRAALTAGDGVVGAIHAQTTELKDEPSGGDTAHGPTFLAQGD
>NZ_CP012109.1|WP_002639698.1|8319304_8319598_-|hypothetical-protein
METDVNPASRLSERDYQDAPPVVRGEHAEASFTRLIEQQTAKVPSHVFLVASLAAMGVSFALEVSGRSRPSRFIGQWVSPLLVMGVYNKLVKIFGQR
>NZ_CP012109.1|WP_044890187.1|8318566_8319226_-|TIGR02269-family-lipoprotein
MWRTWAVYLLLFAVPWLGCASVQEVHDRPPWNECDAPGDDVCVGLLCQGAMCGFYRCEELPVEVELARFPPARPPAAAAAPGRGPRRNWGGGQSLPRGAVMVFPNWDGAPQQVIPPSRRLTPGRWEKHHIFPQAEDLARWFEGRGVKIHDYTMPIPREVHRRIHGPGGNGGAWNNAWREFRDRKQNARPDEIFKFAGELIHRFELIGGPIQPYYARPGA
>NZ_CP012109.1|WP_044890186.1|8317837_8318560_-|double-CXXCG-motif-protein
MTRFFWLREDEAATSAFSGAFNAVHKWSLPGVTCSDCGATWSSWGCHYPCVDLSKLPERAEFERARPEPYPEFARLRERVRPLAPVNAVLPPGAAFGPLMGTASGEFGPFTWQGTSLLLVRRDALERLQATGVHGLVGARTELRFRKKDPPELMDLQLEPHGLLHRDCIPSDTPPPCETCGRRAFDRPEEPVLDAASLPSDVDIFRLANFTTMIVGTDRFVDAVKRLGLPGLSAEELPVR
>NZ_CP012109.1|WP_002639701.1|8316220_8317336_+|DNA-alkylation-repair-protein
MADSLKTFFDARLVERLAASLHQAAPSFPRANFIREAAKGLDGQELMDRARHIAGALHRALPSDYPEAVEVLLRSLGAQAKLTEGGAMASFFYLPHTMFIAEHGLALAHFEASMRAQHALTQRFTAEFSIRPYLERHTAKTLARLREWTEDPSEHVRRLVSEGTRTRLPWASRLREFQKDPTPVLALLERLKDDPALYVRRSVANNLNDIGKDHPALLVQVAKAWMRDAPPERKWLVRHALRSSIKRGEPAALEVVGAKPPSGIEARVTKLPRRASLGGTVEVHFEVANRSKKPQTLVVDLAVHFQKANGETRPKVFKVRELTLGPGQAEEVCKRVSFEQLTTRKHYAGPHRFEALVNGLGLPLGVVEVGR
>NZ_CP012109.1|WP_002639703.1|8312920_8314063_-|DNA-replication/repair-protein-RecF
MRLLALHVHDFRNLPQVQLSPSAHATIAVGQNGQGKTNLLEALYFLATLKPLRAGRLSELVRWGSQGARVTGRFLLKGAEREISVEVGGGTRQAFVDGKKASSLEDYFGGVSVVAFTPDDLEVVKGGPDSRRGFLDRAVFNRYPAFLRESREYARALKNRNRLLREGHAVDAAYLDAYDETLAKAGARIYSRRRSLMAELAPRAQATFASIGRTVDPAVYGYRPAHLDGDFANADEAALAALLRECLAGRLRRDMERGFTSVGPHADDVSVTLGGRSARAYASQGQQRALVLGWKIAEIENLEAAMGFLPLLLLDDVSSELDPERNAYLMGYLARSGAQTVLTTTDGSLVRGAAADDTLWLDVHGGQVAVHVDDAAPPAA
>NZ_CP012109.1|WP_002639704.1|8312526_8312919_+|hypothetical-protein
MDGGLAIFGFGLFLLGIANLYTRHSYWLAVPVLLLSVVSMGLAFSESKRLREVSLGMGIALLVLTLIAVAVGTPWWLPMATFLFAAAYGVLWAEYRFPFFQHVSPGEEPRHHSERRFHVHWPWHRRRVTP
>NZ_CP012109.1|WP_044890185.1|8311736_8312288_-|hypothetical-protein
MTRSQGRERATKNGAMLRKTLLCLLVVAPLTGCHRTTFKDSVLTKSAVRYRIGELPSRWERVWLEDNDLAFAEAGTGRAISVNATCTGHDDPSLQVLTRHLLSGFTDRQEVSALPLPMNGREALRSRYLAKLDGVPVQLELVVLKKDNCVFDFTYVAPPGAAADARMADFDGLLSGFEMERRG
>NZ_CP012109.1|WP_002639706.1|8310930_8311740_-|ABC-transporter-permease
MTTRQPELDAVIPHAPPSLMDRAKERLESLGALSRMTGQVFSRAVRPPYDWRGLVYHTESLGVRSLPIALLTAMFAGLVISLQFGYFLSRFGVQYTVGRVVILTLFRELAPVLTALTVGARIGSGIAAELGAMTVTEQVDAIRALGADPLRKLVVPRVLACLIVMPVLTVFADVVGLVAGALVVNFQYAITLNLFFQGALDAVLMPDFASGVFKGAVFGLIIGLVGCFRGLTVEGGTEGVGRATTQTVATTSVSVCLADFFITQLTLSL
>NZ_CP012109.1|WP_002639695.1|8321870_8323151_-|hypothetical-protein
MATHPDNLRARLEDRADLLEATRLRYRALRGMLTAFFWKDRVRAQFELLLEVARAQPEVDATLAALKRRAAAEGWPEQAEPLKLMREVERLREAVEHAAFKRLPVAARPATLGEALLKLEETVLEAGPLLGRHSWARAVELLPRNLPELRAACAAADVFEQVFKRPAPEGLFPFTVEEAEALQRALPLAEGSLAALWQRLDHFDTRGQVKRFLEARASRAPQRVPRSGPELLLHAAFWRGVAWARLRALMETQLEPVVPLDAEVPALLVWLAAREAKLGRAVSGDLGRAGGEVPSQSAEVDASGDIRLPACEAFGEGRAGLFEVAARLAVLSRERPVGTWDEETAWARLWTAAQRARDEQGPDVERLRDALRLFILLRGQGQTPARLFSPERVRVPTADADADAGLDGKDLPTLVHAARAAAWRGR
>NZ_CP012109.1|WP_002639694.1|8323236_8324343_-|DNA-polymerase-III-subunit-beta
MEFRIAADELKKALYRAQGIVERKTTMPILANVLVTANKGGITVTAFDLDIGIVSEHPAEVIKTGAVTLSAKYVFDIVQNLPDAQVTLKKLANNYVDISSGSAHFKIVGMAAEEYPKLPKEENAPLVQVGGNTLLEMIKKTQFAISSDETRYILNGVFFEPQSTGKVRMVATDGHRLALVERELPGDFKLKSGVIIPRKGLMELKRLLDEAPDAECHLGFAENSALFKKPGLTMVMRLIDGQFPEYQRVIPKEGEKVVLVPKVRLLESLKRIALLSADKSNAVRIGLETNQLIITASNPDLGEAKDVLDLAYQGNSVVIGFNARYLMDVLAVTETDEVSFELGDEHSPGVLHAPGDRSFTAVVMPMRV
>NZ_CP012109.1|WP_002639693.1|8324573_8325068_+|hypothetical-protein
MNSRPLLLAALILGLASGCSKPPGASSAPPLASENGTPSSEPAGNAAPRDSENGTPTMNAPTNGSQPKQGESTSYIVKDSGVRCFAPPCPTYNAFPADKPDAEPIPVHELELSSVAEGSDEKMESLIRKTLDGTGLKVQGTLETRPNAGPAGAATVLRASKVEN
>NZ_CP012109.1|WP_044890189.1|8325089_8325701_-|hypothetical-protein
MKSFALLAFGLWAGAASAESLFAHRLTLLDGRERTFAQQAGDGAPESASRGLRRGSAHMEFWASDIQVANMGVKIGGGPIYLTLMAGLEPGRDARFNFAVGVGGHMTLARRLWVDLDVTGGAVQPVRNPLEGDGGNVLGQARLMVGFQLLPRLAVFAGPTYNAWFSWGASDFDSITRMPFSESNPEPDQRLQHWPGLQVGIQI
>NZ_CP012109.1|WP_002639691.1|8325700_8326492_-|hypothetical-protein
MTSAHRTPDWLLERIALGELPPTELAAARARLAEEPDGPARLAALEADSRATLETLPPARVVREVEARASRQDAPRPSFHLSPAWGLVPALAAVALFVVVWPAGQVEPRTAPGDFPEVTRIKGLAPQLVIHRQAAARPERLADGAAAAAGDVVQVAYVAAGRSHGVIVSVDGNGAVTLHAPEEGGTQAMPLAPSGTQALSRAYELDAAPHFERFIFVASDAPFDVEPVLAAARALSGKPDASSAALSLPGNLTQVSLTLEKHE
>NZ_CP012109.1|WP_002639690.1|8326488_8326974_-|sigma-70-family-RNA-polymerase-sigma-factor
MSIDVEAYYRRYGPQVLRRCRFLLRDEEKAVDAMHDVFVQLLRYQGALKDAAPSSLLHRIATTVCLNKLRGAKRRPEDREDELVLQIAAAEDTEARTAARGLLDRLFGRVPASSQDIAVLHLVDGMTLEETAREVGLSVSGVRKRLRALSAVLQELELEAA
>NZ_CP012109.1|WP_002639689.1|8327267_8327930_+|cobalamin-dependent-protein
MLTSHDSALTGLLNAYLSAQLAGNRREALRLLVDEGLLQGIPIQTLHLEVIQPAQYEIGRMWQENLISVAQEHLATAVSQLALAHLYRHLPRDAFNGKVVLVSCVQGELHEVGARMASDFLEMAGFDVRFLGANVPPEHLARMVNEIQPDLVALSVTMSYHLPALREAVAHVRKTRPNVPIAVGGLAFRWAPGLETELGVNFFGKDAREFVASACRVLGV
>NZ_CP012109.1|WP_002639688.1|8327937_8328642_+|hypothetical-protein
MESVSKSVEARADRLATASQEALYQDPFWAARYGLERAQRFGDEDARFHVRYLVQALEEQRPSVMEGYARWLRTLLVTRGMCSRHLDQHFAGLATALEAEGWGPGTAPHDYVGAARQALRYLDGPARLLEEEAPGLSRAATSRLTLYIIPEDQPRLEEELQLQLSYLADALAAGKPTLMGDHVRWYAGFWPRRGFGLLAFPSVLGMLKSVLGSRHPEARALLAEAGVSWEETRS
>NZ_CP012109.1|WP_002639687.1|8328638_8330687_+|response-regulator
MRHSASPEPQFFDDLSREVALVCDAGGTLTWVDPRARNLLAAEPGQTLRALAAQGTEEKVDRLLVQARDEKVEGWELILCRDQMPATFAFRARPHEGGVLMVGSLVPEDYGVALERVSTTLSELSMLHRETERQQRELKRRADELARLNSELEESNRGVRSLHAALDEKAESLQLAAEIKSRVVANVSHEFRTPLHSILGLSKVLLNPINGPLSGEQEKQVQFIRNSAEALFELVNDLLDLSKMEAGKTTLRHSRFVVRDALSALRGMMKPLLPPGSPVELRLVEPAEPLEMETDESRLSQVLRNLVSNALKFTESGHVSVSAEPGPRDTVVFTVQDTGIGIAPEHHERIFEEFSQVESHLQRKAKGTGLGLPLARRLTELLGGTLSVKSTLGQGATFTITIPRVHVEIAEMTGLTERSEHLDPSRAPVLVLEDDRQTLFLYEKYLARSGFQVLPVRSTDEARRVLERVRPAAMVLDVMLEGETSWSFLADMKNNESTRDIPILVVTVTDREQKARALGADEFWLKPVDEIQLQRKLQAMARTGPVERILIIDDDDVHRYLLKQLLKDMPYSLLEAAGGKDGVRLAREKSPHLIFLDFVLPDITAFDVLDELKADPRTRDVPVILHTSHELKEDERTRLAKETAAILSKHTLSREVAITRIRDALSKAGLGANAMMEGSRRG
>NZ_CP012109.1|WP_002639686.1|8330679_8332206_+|response-regulator
MVESRLATVLNVNDDDANRYLVNRLLSLAGYNVLEAATGMSALLLAQQHRPDVVILDVKLPDISGYEVCERLRADPNTSAMAVLHTSATFVTSDKKVRGLDGGADAYLTQPFEGAELIATVKSLLRLRHAEQVARNRANELAAMDRRKDEFLAMLGHELRNPLAAIMTSIGILQRRPATDDKEARMRGIIQRQTNHLARLVDDLLDVSRITRDKVELRPGRLDLMPVLRHVLQVTQPLADARGLALDVTLPAGSMWLDADATRLEQVFTNLLDNAVKYTDQGRVTLHVAQEGVDGSARAVVRVKDTGIGIPRDVLPHIFELFAQADTSLERSRGGLGIGLTLVRKLVQLHGGEVTAHSGGPGLGSEFVVKLPLVDAVGLPHAARNAADLRRGRRILLVEDNVDARQAMRDLLELWGHQVAVAPDGLQGVALAVSNPPELALVDIGLPGLDGYRVAETLRHRVGNGIRLVAMTGYGGPEGRDQAMRAGFDRHLVKPVKPDELDRILSEL

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Crispr_ID: NZ_CP012109_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_21

8339806-8339904

Orphan

Consensus_repeat	Method
ACGCGTGATGGTGCTCATCCGCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_21

>merge|NZ_CP012109|21|8339806-8339904|CRISPRCasFinder
ACGCGTGATGGTGCTCATCCGCACGCCGAGCCGACAACGAAGCTCGGTGGCGCCCGCAGCACCGAGCCACACGCCACGCGTGATGGCGCTCATCCGCAC

>NZ_CP012109|21|16|8339806-8339904|CRISPRCasFinder
ACGCGTGATGGTGCTCATCCGCAC	GCCGAGCCGACAACGAAGCTCGGTGGCGCCCGCAGCACCGAGCCACACGCC
ACGCGTGATGGCGCTCATCCGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002637593.1\|8346590_8348150_-\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|341286
NZ_CP012109.1\|WP_002637590.1\|8342785_8343976_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP012109.1\|WP_002639686.1\|8330679_8332206_+\|response-regulator	unknown	unknown	gnl\|CDD\|223715
NZ_CP012109.1\|WP_002639682.1\|8335375_8335789_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_021781298.1\|8340528_8341566_-\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176236
NZ_CP012109.1\|WP_002639679.1\|8338024_8338900_+\|TIGR04222-domain-containing-membrane-protein	unknown	unknown	gnl\|CDD\|275063
NZ_CP012109.1\|WP_044890190.1\|8333074_8334706_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP012109.1\|WP_002637595.1\|8349181_8349916_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP012109.1\|WP_002637594.1\|8348176_8349172_-\|ketoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|238426
NZ_CP012109.1\|WP_082282953.1\|8335860_8336253_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002639685.1\|8332230_8332590_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP012109.1\|WP_002639688.1\|8327937_8328642_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637592.1\|8345847_8346489_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002639687.1\|8328638_8330687_+\|response-regulator	unknown	unknown	gnl\|CDD\|274362
NZ_CP012109.1\|WP_002637591.1\|8343978_8345640_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002639683.1\|8334740_8335379_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637596.1\|8350270_8351218_+\|TraB/GumN-family-protein	unknown	unknown	gnl\|CDD\|350614
NZ_CP012109.1\|WP_044890192.1\|8336320_8337838_-\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|341286
NZ_CP012109.1\|WP_002639677.1\|8339978_8340491_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_082282879.1\|8341715_8342720_+\|lipase	unknown	unknown	gnl\|CDD\|334634

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002637593.1\|8346590_8348150_-\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|341286	cd17631, FACL_FadD13-like, fatty acyl-CoA synthetase, including FadD13. This family contains fatty acyl-CoA synthetases, including Mycobacterium tuberculosis acid-induced operon MymA encoding the fatty acyl-CoA synthetase FadD13 which is essential for virulence and intracellular growth of the pathogen. The fatty acyl-CoA synthetase activates lipids before entering into the metabolic pathways and is also involved in transmembrane lipid transport. However, unlike soluble fatty acyl-CoA synthetases, but like the mammalian integral-membrane very-long-chain acyl-CoA synthetases, FadD13 accepts lipid substrates up to the maximum length of C26, and this is facilitated by an extensive hydrophobic tunnel from the active site to a positively charged patch. Also included is feruloyl-CoA synthetase (Fcs) in Rhodococcus strains where it is involved in biotechnological vanillin production from eugenol and ferulic acid via a non-beta-oxidative pathway.	5.90542e-176
NZ_CP012109.1\|WP_002639686.1\|8330679_8332206_+\|response-regulator	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.17071e-54
NZ_CP012109.1\|WP_002637590.1\|8342785_8343976_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	6.82178e-36
NZ_CP012109.1\|WP_021781298.1\|8340528_8341566_-\|zinc-binding-dehydrogenase	gnl\|CDD\|176236	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	7.08968e-166
NZ_CP012109.1\|WP_002639679.1\|8338024_8338900_+\|TIGR04222-domain-containing-membrane-protein	gnl\|CDD\|275063	TIGR04222, integral_membrane_protein, TIGR04222 domain. The majority of the proteins with a domain as described by this model have an extreme C-terminal sequence that is consists of extremely low-complexity sequence, rich in Ser or in Gly interspersed with Cys. That C-terminal region resembles ribosomal natural product precursors, although there is no evidence that C-terminal regions of these proteins undergo any modification or have any such function.	5.14678e-24
NZ_CP012109.1\|WP_044890190.1\|8333074_8334706_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	3.60314e-63
NZ_CP012109.1\|WP_002637595.1\|8349181_8349916_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.23941e-18
NZ_CP012109.1\|WP_002637594.1\|8348176_8349172_-\|ketoacyl-ACP-synthase-III	gnl\|CDD\|238426	cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.	2.77552e-127
NZ_CP012109.1\|WP_002639685.1\|8332230_8332590_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.2936e-10
NZ_CP012109.1\|WP_002639687.1\|8328638_8330687_+\|response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	3.00108e-54
NZ_CP012109.1\|WP_002637596.1\|8350270_8351218_+\|TraB/GumN-family-protein	gnl\|CDD\|350614	cd14789, Tiki, Tiki homology domain antagonizes Wnt function via cleavage of amino-terminal residues. Tiki is a membrane-associated metalloprotease that inhibits Wnt via the cleavage of its amino terminus, diminishing Wnt's binding to receptors. Wnt is essential in animal development and homeostasis. In xenopus, tiki is critical in head development. In human cells, TIKI inhibits Wnt-signaling, which is important in embryogenesis, homeostasis, and regeneration. Deregulation of WNT contributes to birth defects, cancer and various diseases. TIKI homology domains are part of the TraB family and are related to the Erythromycin esterase, GumN plant pathogens, RtxA toxins, and Campylobacter Jejuni heme-binding, Chan-like proteins. TraB/PrgY are identified in gut bacterium Enterococcus faecalis, but its function has not been well characterized. Plasmid-borne, TraB has been implicated in the regulation of pheromone sensitivity and specificity. Based on homology to TIKI activity, it has been proposed that TraB acts as a metalloprotease in the inactivation of mating pheromone. The TIKI/TraB family has 2 conserved GxxH motifs and conserved glutamate and arginine residues that may be catalytic.	6.30725e-76
NZ_CP012109.1\|WP_044890192.1\|8336320_8337838_-\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|341286	cd17631, FACL_FadD13-like, fatty acyl-CoA synthetase, including FadD13. This family contains fatty acyl-CoA synthetases, including Mycobacterium tuberculosis acid-induced operon MymA encoding the fatty acyl-CoA synthetase FadD13 which is essential for virulence and intracellular growth of the pathogen. The fatty acyl-CoA synthetase activates lipids before entering into the metabolic pathways and is also involved in transmembrane lipid transport. However, unlike soluble fatty acyl-CoA synthetases, but like the mammalian integral-membrane very-long-chain acyl-CoA synthetases, FadD13 accepts lipid substrates up to the maximum length of C26, and this is facilitated by an extensive hydrophobic tunnel from the active site to a positively charged patch. Also included is feruloyl-CoA synthetase (Fcs) in Rhodococcus strains where it is involved in biotechnological vanillin production from eugenol and ferulic acid via a non-beta-oxidative pathway.	0
NZ_CP012109.1\|WP_082282879.1\|8341715_8342720_+\|lipase	gnl\|CDD\|334634	pfam01674, Lipase_2, Lipase (class 2). This family consists of hypothetical C. elegans proteins and lipases. Lipases or triacylglycerol acylhydrolases hydrolyze ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids. Lipase EstA is a extracellular lipase from B. subtilis 168.	6.4401e-79

>NZ_CP012109.1|WP_002639679.1|8338024_8338900_+|TIGR04222-domain-containing-membrane-protein
MDFLNLPGPQFLKVFMALSLGAMALGFTLRWLLRAPGGSLQPLPATWDPFEVAMLSGPKAVVHTALAKLLHQKALKVEDGLLVTTGAQSKFASPVERLVHEAIKEQEDSNDKLVERVQPAFGRLKRNLSQRGWLVSGTQALWARWLPPLPMLFVLLLGFSKILLGVERGKPVLFLCLLCVAGVVGLVILMRPVWTSRLGASVYRTLREEQRPLQESSRGAESPQALSSNALCLAVALYGLDVMTVGDFALLPRHLLGNSLSTGTSSSSGGCGSDSSSCGGGGGCGGCGGGD
>NZ_CP012109.1|WP_044890192.1|8336320_8337838_-|long-chain-fatty-acid--CoA-ligase
MPIVHDWLARRAALAPERTALIDAQHGERHISFREWNASASRTAAFLHHALGVGRGDRVAVLAYNGVEFLDLFFACAKLGAILQPLNWRLSASELGSLLADAEPSVFVFGPEFRAQAEAVRPGAAFVKHWLSLASPGLGERAFSERDGQKDVSLPALELEADAPWVLCYTGGSTGLPKAAVLTHGSITANAVNTVMGWGLTAGDVALLNAPLFHAGGLSVFTAPLVYVGGASVVCRSFDVEGVFDLVQRGVVNLVFGVPTMFIEMQRHPRFDAVDLSRVKLVISGGAPCPEPVFERFFARGVDFKTGYGLTEAGPNNFWLPPEDVRRKPGAVGVPLFHVEARIEGEAQPGDVGELLLRGPHLCAGYWRRPEDTARTFAGGWLHTGDLAVRDAEGCFRIVGRSKDLIISGGENIYPSEVESVLAGHPEVAEVAVIGVVDPKWGETPRALVVARPGTAPSAEALLAFCDGRLARYKTPKSVRFIDALPRTSAGKVDRRALSATHGAP
>NZ_CP012109.1|WP_082282953.1|8335860_8336253_+|hypothetical-protein
MPRAPAQEAARFSFPLELPAEGMLHLDGNTAAAIQLALEDFLPRGAPLPAGIPPDEACLHQQQSYDVMSAPGPEGVVLVQFTPNDAVCPPPPGLSVEARSGKPLLDVTTYAVDVRTMRILSVGVHVRPRS
>NZ_CP012109.1|WP_002639682.1|8335375_8335789_+|hypothetical-protein
MKLKVLLSCIMLAGCATRPGPLPRVPPAEAAWFKFPDALPADTRREVPAATAAAIQLAMDDFRPRHVRLPEDASAVEVCLNQRQSYDVRTAPSTEGILLVRFSVSPGACMQEGAVNDMGATYAVDTQAWRILAVQLP
>NZ_CP012109.1|WP_002639683.1|8334740_8335379_+|hypothetical-protein
MRHERGVLLASVLLASCSSAPWMPREAEHYGFTTSASRRVWVRGPWEAIVPSNDIDEVIDQLCPAIMKLPGAMDRDYGQEYCGALYTLGDGVYHASFPSPLGPRRPVGPSKRKTCYAPMSIRDERGRASVIADYHSHPWFPSPMSEEDRRANTQRYFIRIQFDARCIIHKLVPYANEPRPGELYVRVDKQWRLVGHILPDDKATGRITTVTE
>NZ_CP012109.1|WP_044890190.1|8333074_8334706_+|methyl-accepting-chemotaxis-protein
MSVGRNLLVKLCVAMGVVALPLLLVILGFVLPELREQLREDRILGLKQAVETAYGVLEVYEARERDGSLTRQEAQEQAAALLARLRYSGVEYFWVNDLDTRLVMHPHLPDMLGKDLRGYRDVRGKPVFVDIVRLARAQGAGAVSYEATRPGSPEAIPKESYVKLFAPWGWVLGTGVYVEDVEREVAAVRQRILVAVGGALLLALLAGVYLSRRVVRPVQELAQAARRVARGDLDARVEVRSSDEVGQLSAAFNTMVGGLHEVVRALVEAAGATALDAERIRTSADTLTVATREQSDSLQRAAETVQGMSARVSQGAETARTAAKTAVATGAVAREGGEAVGQALRKMEEMAGVVERSATTVERLQASGRVTAEMLRLIQQVAEETQLLAVNTAIEAARAGQHGKGFSVVAGEVRKLANRTRDAAGQVQTMLARSEADMRAAAELMRQGTTMVHEGLGMSSTAGNALSRLLASVNEIGGTVERMADENTRQSESGEHIAGRIHALSARSTESVAGVQQIARAVEDLHARASKLKELAARFTARA
>NZ_CP012109.1|WP_002639685.1|8332230_8332590_-|helix-turn-helix-transcriptional-regulator
MDKKLATTIGAAARVARNRLELTQADVAERIDVATEVYGRLERGGMLPSVQTLMKLCHELHVSADELLGLASNGAPRPGEPPVATQERPEVRRLLRTVRPLEPAKVKLLGLVANALNRR
>NZ_CP012109.1|WP_002639686.1|8330679_8332206_+|response-regulator
MVESRLATVLNVNDDDANRYLVNRLLSLAGYNVLEAATGMSALLLAQQHRPDVVILDVKLPDISGYEVCERLRADPNTSAMAVLHTSATFVTSDKKVRGLDGGADAYLTQPFEGAELIATVKSLLRLRHAEQVARNRANELAAMDRRKDEFLAMLGHELRNPLAAIMTSIGILQRRPATDDKEARMRGIIQRQTNHLARLVDDLLDVSRITRDKVELRPGRLDLMPVLRHVLQVTQPLADARGLALDVTLPAGSMWLDADATRLEQVFTNLLDNAVKYTDQGRVTLHVAQEGVDGSARAVVRVKDTGIGIPRDVLPHIFELFAQADTSLERSRGGLGIGLTLVRKLVQLHGGEVTAHSGGPGLGSEFVVKLPLVDAVGLPHAARNAADLRRGRRILLVEDNVDARQAMRDLLELWGHQVAVAPDGLQGVALAVSNPPELALVDIGLPGLDGYRVAETLRHRVGNGIRLVAMTGYGGPEGRDQAMRAGFDRHLVKPVKPDELDRILSEL
>NZ_CP012109.1|WP_002639687.1|8328638_8330687_+|response-regulator
MRHSASPEPQFFDDLSREVALVCDAGGTLTWVDPRARNLLAAEPGQTLRALAAQGTEEKVDRLLVQARDEKVEGWELILCRDQMPATFAFRARPHEGGVLMVGSLVPEDYGVALERVSTTLSELSMLHRETERQQRELKRRADELARLNSELEESNRGVRSLHAALDEKAESLQLAAEIKSRVVANVSHEFRTPLHSILGLSKVLLNPINGPLSGEQEKQVQFIRNSAEALFELVNDLLDLSKMEAGKTTLRHSRFVVRDALSALRGMMKPLLPPGSPVELRLVEPAEPLEMETDESRLSQVLRNLVSNALKFTESGHVSVSAEPGPRDTVVFTVQDTGIGIAPEHHERIFEEFSQVESHLQRKAKGTGLGLPLARRLTELLGGTLSVKSTLGQGATFTITIPRVHVEIAEMTGLTERSEHLDPSRAPVLVLEDDRQTLFLYEKYLARSGFQVLPVRSTDEARRVLERVRPAAMVLDVMLEGETSWSFLADMKNNESTRDIPILVVTVTDREQKARALGADEFWLKPVDEIQLQRKLQAMARTGPVERILIIDDDDVHRYLLKQLLKDMPYSLLEAAGGKDGVRLAREKSPHLIFLDFVLPDITAFDVLDELKADPRTRDVPVILHTSHELKEDERTRLAKETAAILSKHTLSREVAITRIRDALSKAGLGANAMMEGSRRG
>NZ_CP012109.1|WP_002639688.1|8327937_8328642_+|hypothetical-protein
MESVSKSVEARADRLATASQEALYQDPFWAARYGLERAQRFGDEDARFHVRYLVQALEEQRPSVMEGYARWLRTLLVTRGMCSRHLDQHFAGLATALEAEGWGPGTAPHDYVGAARQALRYLDGPARLLEEEAPGLSRAATSRLTLYIIPEDQPRLEEELQLQLSYLADALAAGKPTLMGDHVRWYAGFWPRRGFGLLAFPSVLGMLKSVLGSRHPEARALLAEAGVSWEETRS
>NZ_CP012109.1|WP_002639677.1|8339978_8340491_+|hypothetical-protein
MSARERLAREQEELVRALGVGAPVPAGFDASRVLAAAQSLISKRRRSVERAWPVLAAALGPDFAHNFETWARAHPISVNPDAHADGRRFAQALQAEGRLPGRLSRNLLDFDITWKMTPAGEAVRRRGFALIIRRHDTTHRFLWALRLPGGRVLRWAPEPPSSRGAALPQG
>NZ_CP012109.1|WP_021781298.1|8340528_8341566_-|zinc-binding-dehydrogenase
MRARKVVIPKAGGYEQLHLEEVNQDSPGFGEVRVATEAIGVNYADCVIRMGLYASAKEYVGWPITPGFEFAGHVEAVGPGVEDLAPGARVFGVTRFGGYATHVTVPRHQLFTLPARLSMEQAAGFPTVFLTAYYALFELAHPRPGANVLVHSAAGGVGGALLQLGRIAGCRMVGVVGGTHKVETARAQGAEVVIDKSREDLWRAAKLAAPKGYDVVLDANGPSTLRDSYKHLASPGKLVIYGFHSMLPRTGGRPNYAKLAWDWLRTPRFDPLSLTNDNTSVMAFNLSYLFEQRAVLEESMARLLGWLDEGKLVPPPVKAYPLDAVAEAHRALESGGTVGKLVLVP
>NZ_CP012109.1|WP_082282879.1|8341715_8342720_+|lipase
MPMRLRPSLYIASTLLLGITTGCGEDIAPHEEELGAVEAAAVSTSGATTHFRSWLSANGYNSYDFVRAELSGGSFGGKEHANDTVTKQPVIFIHGNSDKAVGSVFGQTGWTNSIEYFQSRGYKTSELYATTWGPANALQSPNQYHSKANVMKVRKFIEAVKAYTGASKVDIVAHSMGVTLARKAIMGGTAHDAADGGSYNVGAPLTSSVDTFVGIAGANLGLTSCYMSGPSTPTCGSTNGLYPGYLLWGSVTGRSTYLNDLRSKSRYEGAYIYSIYSTADEIIGFDGIVYGEYTSRIPGQNGEKRYTGYPYGHFNSKDLTEAVQYEMVVNHRVP
>NZ_CP012109.1|WP_002637590.1|8342785_8343976_-|alpha/beta-hydrolase
MSTSRAFTALLLAAGLSSAGCVRSFAHQPALSFQDLDYTSEGTKQPWPVNRIPLPRTANQYGMAVIPEMAYVDMPGSGPDAKTVVFIHGLGSYLKFWRAQLDAFQQQGYRVIAVDLPGFGKSDKPGGFPYTMEAMADAVLELVDTLGVEKPVLAGHSMGGQTSLSYAIRYPDSLSALVLASPAGFEKFTWREKEWFARVMSTEFIKAAPESAIWGSVRQGNFMHWRPELEWLIEERVRLTKSPEFDAYAYANVRTVRGLSNNDFVRGNLHRVTVPTVIIYGTDDRLIPNPFLHGGEARGIMEYGASHIPGAKLVAMEGCGHTVQLDCPERFNEAAFAFVREAVAGSIPVPAAPEKQEAPTPDSPSTPSSEPQSPGTLPPPTPGQEGEPTPGVLPVP
>NZ_CP012109.1|WP_002637591.1|8343978_8345640_-|hypothetical-protein
MARWWLSEARRTARRSAGVLALALAGVSLPAAAQSTPVPGLYFGEWNNEENRDEDAKPREFTLINYFFTRLSVQNQVGDPAGLRGVALGPIGLPAGSAVRAEPGLSAYFIEQRWIPVIEYSPHFVDGLASFRAQFEIDYMWGRSANALQQNEGGGFNADQVNIQTKNVNVALYPTRKPRELTILVGTQPLYDNVYDPTRTPLSDITRTGYKMSFVGSDATGISIFSGYKGLAKLSLMPLGSAQADKATRNDPRLKFIWLLTADYVYPVRPNTNVGVSLWLLNDQTKGDAYAFEGLVKSGPSSTGLNTFTGTARFDITRPTGNVVYAGANFNHNIDFRNGRFGASGFVMYNGGKFVSDDPERSALSELTISGLSANLELMYQWGRGPADMLTLEGMYTTGDDDLSDSRYTGAFTLNQYGLPGAVWFNHKMLILFPFTSTVNNYTGAVTDISNQGYGMRAAIATAAWDVVPNKFNVKLGVGTATSDATPVRWTPEVERGRYIGTEVNAELRYHIRYLMTVGLHAGYLFRGSFYDGSPTIRTNPFSAFTTFTWYAF
>NZ_CP012109.1|WP_002637592.1|8345847_8346489_-|hypothetical-protein
MNKKLLSAVMTSALCLVGCGEADPINPGPDGNNSPNLSTAQGIQTFLEGKTLTMRGDDIPSHPNGFSEDVNFGASSQCYQSVTMTVQGGNFRVDSVPGTIEGAPNAGQTGTCNPEVAQNPLSFTSTVVSIENVSADGECFDVAFTFPGFRQVGRGSFSADQRKLDLELFFEGGATGANCAAGGVGSASVNQVIGGNSQPFTGNAVQSYVISGS
>NZ_CP012109.1|WP_002637593.1|8346590_8348150_-|long-chain-fatty-acid--CoA-ligase
MFIGDWMGRGALYWPDHVAVVDVARGDAGRFTYRAMNARATALGGWLRDVAGVKKGDRVGIVAHNGVEYLDALFACAKIGAVFVPYNWRLHAAELTDLVRSIRPSVLLFGDEFRDTVADVRERLGGGPRLVALEPQGLPGADVYETTLSHVSASPVTQDAVSEEDILCLIFTGGTTGRSKGARVSYRMVAWNTLNTLVHEVRPGDVTVTHTPMFHTGGLLVYTLPLLTVGGTVVLMRRWEPDALLDLIPREKVSLFFAVPTQYQQLMESPRFRTTDFVSVRFMTSGGAALPVPLIQAWQAVHPVPFKQGFGMTEFGPGLFSMGPEYAVSKAGSIGRPNYFIAAKLVDDDGREVATGEVGELILKGPSMCSGYFEDEAATREAIDPDGWLHTGDLARMDADGFFTIAGRKKDMFISGGENIYPLELEAALYEHPEVAQCAVVGVPDEKWGEVGRAYVVLKPDGKVSAEALLEHLRGRVARFKVPKRVELLERLPISAAGKILKRELREAAVASDTDKPRH
>NZ_CP012109.1|WP_002637594.1|8348176_8349172_-|ketoacyl-ACP-synthase-III
MRYAQILSTGRYVPEKVLTNADVEKILGEKVDEWLQQNVGIRERHMMADDQVTSDLCVGAARQALERSGTKPEELDLIIIATDTPDYLSPATASVVQAKLGAVNAGTYDLNCACAGWVTALDVGSKTIAADDSYQRILVVGAYGMSRYINWKDKKTATLFADGAGAVVLGASDKPGFLGAKLLANGEYHDALGVYTGGTNRPATAEALELTNGKPAVQFVRKFPATFNTERWPMLLDQLLKRQNLKLDDVKQFVFTQLNLRTIEATMKILGQPMEKAHYTMDKWGYTGSACIPMTLDDAVVQGKVQRGDLVALCASGGGLAMASALYRWTA
>NZ_CP012109.1|WP_002637595.1|8349181_8349916_-|TetR/AcrR-family-transcriptional-regulator
MNRASASPDRSGPVTPRGQRTRAKLLKAAESVFGEKGYERASIADITRKGGVALGTFYVYFPDKQSIFVEVVDELGTRLRRLIAESVAGCENRVDVERQGLRTFFQFVRQHPNLYRVVRQAEFVDEACYRRYYDRFARGYVSGLTRAMEAGEVRRMDPEALAYCLMGISDFLGMRWVLWEEDPGLDRVLDTAMTLISHGLDPRAPSTGRNTVKSSTASKAKPKPKTPKKNTLRSARRPARGARS
>NZ_CP012109.1|WP_002637596.1|8350270_8351218_+|TraB/GumN-family-protein
MHAMKSSSLLTSLLLSTWLGLGCASTPAPTPDAAAPTDTGLAFLWEVTDSKGGLAYLVGSVHLGKEGTLPLTPSMETAFEKSDVLVVEVDVGKVDTADMQRLLRGLGLLPKGQRLTDRLEPETMMLLGSTAERLGLELRNLERLRPWLVGLTIGVMEFQRAGYQQGHGVDRAFLDRARGVQMDIVELETAESQLRLLAETPEPLQDLMLRDQLRRERPVAEVLELLIGTWKAGDAERLAQLLLEGAEDPTYRPVYERIFFERNQQMARSMEAMLAEPRTHFVVVGAGHVVGPGGIVDLLQKRGFTARQLPRDVSR

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Crispr_ID: NZ_CP012109_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_22

8609140-8609403

Orphan

Consensus_repeat	Method
GAGGTCGAGGCCAGTGGCGGCTCC	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP012109_22

>merge|NZ_CP012109|22|8609140-8609403|CRISPRCasFinder
GGCATCCACGCCAGTGGCGGCAGCCGCGTGGACGCGGAAGCCAGCCGCACGGACAAGTTCGAGGTCGAGGCCAGTGGCGGCTCCATCGTCAAGGTGCGCGGCGTGGATGCGCGCCAGGTGGAGGCCGAGGCCAGTGGCGGCTCCGACGTCACGCTCTCCGGTCAGGCGACGGACCTGGACGTCGAGGTCAGCGGCGGATCCACGCTGCGCGCCCTGGACGTGAAGGGCGTGAAGACGCTGGACGCGGAGGCCAGTGGCGGCTCG

>NZ_CP012109|22|17|8609140-8609403|CRISPRCasFinder
GGCATCCACGCCAGTGGCGGCAGC	CGCGTGGACGCGGAAGCCAGCCGCACGGACAAGTTC
GAGGTCGAGGCCAGTGGCGGCTCC	ATCGTCAAGGTGCGCGGCGTGGATGCGCGCCAGGTG
GAGGCCGAGGCCAGTGGCGGCTCC	GACGTCACGCTCTCCGGTCAGGCGACGGACCTG
GACGTCGAGGTCAGCGGCGGATCC	ACGCTGCGCGCCCTGGACGTGAAGGGCGTGAAGACGCTG
GACGCGGAGGCCAGTGGCGGCTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_044890237.1\|8599571_8601653_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044890236.1\|8597766_8598312_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369610
NZ_CP012109.1\|WP_002637804.1\|8598569_8599538_+\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350237
NZ_CP012109.1\|WP_002637802.1\|8597179_8597770_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP012109.1\|WP_002637800.1\|8595720_8596491_+\|haloacid-dehalogenase-like-hydrolase	unknown	unknown	gnl\|CDD\|273654
NZ_CP012109.1\|WP_002637818.1\|8617144_8619046_+\|PHB-depolymerase-family-esterase	unknown	unknown	gnl\|CDD\|273828
NZ_CP012109.1\|WP_002637816.1\|8614182_8615868_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012109.1\|WP_002637801.1\|8596494_8596986_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637812.1\|8610003_8610735_+\|DUF429-domain-containing-protein	unknown	unknown	gnl\|CDD\|377266
NZ_CP012109.1\|WP_044890239.1\|8613190_8613484_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637819.1\|8619068_8620379_-\|type-II-toxin-antitoxin-system-HipA-family-toxin-YjjJ	unknown	unknown	gnl\|CDD\|236623
NZ_CP012109.1\|WP_002637808.1\|8603332_8605228_-\|VacB/RNase-II-family-3'-5'-exoribonuclease	unknown	unknown	gnl\|CDD\|273947
NZ_CP012109.1\|WP_021781314.1\|8613514_8613811_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637806.1\|8602005_8602503_+\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|308985
NZ_CP012109.1\|WP_044890238.1\|8610777_8612988_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374104
NZ_CP012109.1\|WP_002637817.1\|8615944_8616913_+\|glutathione-synthase	unknown	unknown	gnl\|CDD\|235371
NZ_CP012109.1\|WP_002637821.1\|8621430_8621691_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637820.1\|8620607_8621411_+\|methyltransferase	unknown	unknown	gnl\|CDD\|226608
NZ_CP012109.1\|WP_144429805.1\|8602623_8603325_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637810.1\|8605547_8608712_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_044890236.1\|8597766_8598312_-\|hypothetical-protein	gnl\|CDD\|369610	pfam07946, DUF1682, Protein of unknown function (DUF1682). The members of this family are all hypothetical eukaryotic proteins of unknown function. One member is described as being an adipocyte-specific protein, but no evidence of this was found.	6.57409e-06
NZ_CP012109.1\|WP_002637816.1\|8614182_8615868_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.42387e-86
NZ_CP012109.1\|WP_002637804.1\|8598569_8599538_+\|NYN-domain-containing-protein	gnl\|CDD\|350237	cd11297, PIN_LabA-like_N_1, uncharacterized subfamily of N-terminal LabA-like PIN domains. This N-terminal LabA-like PIN domain is found in a well conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. LabA from Synechococcus elongatus PCC 7942, (which does not contain this C-terminal domain), has been shown to play a role in cyanobacterial circadian timing. The LabA-like C-terminal domains characteristic of this subfamily may be related to the LOTUS domain family (which also co-occurs with LabA-like N-terminal domains). The function of the N-terminal domain is unknown. The LabA-like PIN domain family also includes the N-terminal domain of limkain b1, a human autoantigen localized to a subset of ABCD3 and PXF marked peroxisomes. Other members are the LabA-like PIN domains of human ZNF451, uncharacterized Bacillus subtilis YqxD and Escherichia coli YaiI. Curiously, a gene labeled NicB from Pseudomonas putida S16, which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like PIN family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.99949e-42
NZ_CP012109.1\|WP_002637802.1\|8597179_8597770_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	5.53205e-08
NZ_CP012109.1\|WP_002637800.1\|8595720_8596491_+\|haloacid-dehalogenase-like-hydrolase	gnl\|CDD\|273654	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled here are all bacterial. The IB subfamily includes the enzyme phosphoserine phosphatase (TIGR00338). Due to this relationship, several of these sequences have been annotated as "phosphoserine phosphatase related proteins," or "Phosphoserine phosphatase-family enzymes." There is presently no evidence that any of the enzymes in this model possess PSPase activity. OMNI\|NTL01ML1250 is annotated as a "possible transferase," however this is due to the C-terminal domain found on this sequence which is homologous to a group of glycerol-phosphate acyltransferases (between trusted and noise to TIGR00530). A subset of these sequences including OMNI\|CC1962, the Caulobacter crescentus CicA protein cluster together and may represent a separate equivalog. [Unknown function, Enzymes of unknown specificity].	3.81934e-13
NZ_CP012109.1\|WP_002637818.1\|8617144_8619046_+\|PHB-depolymerase-family-esterase	gnl\|CDD\|273828	TIGR01840, poly3-hydroxybutyrate_depolymerase_A_precursor, esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. [Fatty acid and phospholipid metabolism, Degradation].	3.03467e-76
NZ_CP012109.1\|WP_002637812.1\|8610003_8610735_+\|DUF429-domain-containing-protein	gnl\|CDD\|377266	pfam04250, DUF429, Protein of unknown function (DUF429).	4.68321e-05
NZ_CP012109.1\|WP_002637817.1\|8615944_8616913_+\|glutathione-synthase	gnl\|CDD\|235371	PRK05246, PRK05246, glutathione synthetase; Provisional.	1.4768e-136
NZ_CP012109.1\|WP_002637819.1\|8619068_8620379_-\|type-II-toxin-antitoxin-system-HipA-family-toxin-YjjJ	gnl\|CDD\|236623	PRK09775, PRK09775, type II toxin-antitoxin system HipA family toxin YjjJ.	0
NZ_CP012109.1\|WP_002637808.1\|8603332_8605228_-\|VacB/RNase-II-family-3'-5'-exoribonuclease	gnl\|CDD\|273947	TIGR02063, Ribonuclease_R, ribonuclease R. This family consists of an exoribonuclease, ribonuclease R, also called VacB. It is one of the eight exoribonucleases reported in E. coli and is broadly distributed throughout the bacteria. In E. coli, double mutants of this protein and polynucleotide phosphorylase are not viable. Scoring between trusted and noise cutoffs to the model are shorter, divergent forms from the Chlamydiae, and divergent forms from the Campylobacterales (including Helicobacter pylori) and Leptospira interrogans. [Transcription, Degradation of RNA].	5.36159e-149
NZ_CP012109.1\|WP_002637806.1\|8602005_8602503_+\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|308985	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain. This family of proteins contains 8 conserved cysteines. It has in the past been annotated as being one of the complex of proteins of the flagellar Fli complex. However this was due to a mis-annotation of the original Salmonella LT2 Genbank entry of 'fliB'. With all its conserved cysteines it is possibly a domain that chelates iron or zinc ions.	1.72918e-05
NZ_CP012109.1\|WP_044890238.1\|8610777_8612988_-\|hypothetical-protein	gnl\|CDD\|374104	pfam15780, ASH, Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin. The ASH domain or N-terminal domain of abnormal spindle-like microcephaly-associated protein are found in proteins associated with cilia, flagella, the centrosome and the Golgi complex. The domain is also found in Hydin and OCRL whose deficiencies are associated with hydrocephalus and Lowe oculocerebrorenal syndrome (OCRL), respectively. The fact that Human ASPM protein carries an ASH domain indicates possible roles for ASPM in sperm flagellar or in ependymal cells' cilia. The presence of ASH in centrosomal and ciliary proteins indicates that ASPM may possess roles not only in mitotic spindle regulation, but also in ciliary and flagellar function.	0.00337549
NZ_CP012109.1\|WP_002637820.1\|8620607_8621411_+\|methyltransferase	gnl\|CDD\|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	2.43021e-52
NZ_CP012109.1\|WP_002637810.1\|8605547_8608712_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	8.5226e-81

>NZ_CP012109.1|WP_002637810.1|8605547_8608712_+|protein-kinase
MSGNRLPLAPEARSLGKYEVLCRLSTGGMAEIFLASQRGLAGFHKLVVLKQILPDIRGEEEFVRMFLDEAKVTAAFNHPHIAQVYDLDIADGELFLSMEFVPGATLVEVARACRQAQTPIPMGYSLMAVRDTAVALHYAHTFTDPLGRPSPVIHRDVAEKNIMVTYEGVTKLLDFGIAKSLARASRTAVGMVKGTSGYMSPEQIMGEQLDARSDLFSLGVVLHECLTGMRLFYAKQADAMMNAVLRCEVTPPSRTNKHVPPELDAIVMRALSKRREDRYASTLEFARAIERAVGPLIWHPEQSSELMLRLFSDRRDQTRQLLASGQDETGDTTGVVKLARVMAMGGLEASELPTGAVTVTPPKHPVPPKALTPPPPPSPRRTSTTTLPASEPMFRSPVLKAPPGKKLTGRPPPPPLEALPPPPPESGVQNARTVPGLPAIPPEHTVRAQLPSSLRDAVPPPPPSGEPAPRQGSRGVTTDGGAGAAKQAQGRVGKTAEPPPPPDEARSSRGGRAQDAAASDDAARSSRGGRAQDAAASDDAARSSRSGRAQDAAASDDAARSARGGRAQDTAASDDAARSARGGRTQDSATTDDAARSARGARAQDPAELEDTARSSRAGRAANADDMADEETTRPGSLRSMAPIPSDDAPRARASRTPNPSPAVDEAPRAEPRSRSTRTQDGLRAAGLPPETSAPRAQEEAPRARSSRTQDGLRAAVASPQPAERDLQTAMIRMPVMPADRGDDTAPLTPTARRGPQSRRRQSPSSAEPATQPVRVHDTPDMEDEESTLLNRGASAPRARQREAQPPPPRRSRAWMAVAGVVGVLALGAALVMLGRDGGIVSSRLKPQPTPMAATKGQTGGSAKTKAVAPSDSAKTDTAAASNTPEAPPAQDADPSTTAPTGPNEVELGTLTDVALAPTDGTPESSDDEDTPTREPRTFKRVRGGSAAQREKVAAAPQRKARTGKDAASVTAAQSESAPMGEPGFLTLVTEPKAQVFFGGKDLGKTPLLKVKLPAGQHTLKLVDATDTAHQVPVDIKPGETTSVRGPLSLLSDP
>NZ_CP012109.1|WP_002637808.1|8603332_8605228_-|VacB/RNase-II-family-3'-5'-exoribonuclease
MDTSVSPRTVTGRLDVHPRGFGFLTVQTPGSAEVLSAFVPPPDLNPYFAGDIVTATVTAAADGRWSASQLSLVERTRARVYGEVVLRKGAPLLRVDREVANADWALEVGGTPVQAGDAVVARIDEGKVVLLYRVEAGEDRSLERVIARHGLRKDFVSEVVDEARGARAVPHARGARRDLRDVPTVTVDAPSTRDIDDAISVLPAGPDGALRLLVSIADVGEYVKQGTALDDEARERATSVYLAGRVLPMLPEELSSHWLSLVQGEERLCLTVELRIDPQGRVTAADVYESIIRSWARLNYDEVAAFLDRGEVSEPMAPVRDVMPWFRLAAARLAVARAARGGMEFARDEARFTFDQATGELSGLVSEKPTSAHTMIERFMVAANESIAGWLLARGLPGVYRVHEQPDPLRVADLNAFAETSGFAAGFGRELTPLALAAFDRQIAGAVAEPALRSVLRRSLGPSRYTVKPGPHFGLAAPLYLHFTSPIRRYADLAVHRTLKGYLRGRRDFVDQDPEVETLAVHINAKARAANRAENDRHRELEARWMAGHVGKQFPARVTRVRPFGLVVQLDGMLVEGVVPADALPGGPFRPDARELSLVGKERTFTVGMPVTVKVASTDEQLGRIELSLAG
>NZ_CP012109.1|WP_144429805.1|8602623_8603325_+|hypothetical-protein
MVTCSLLTAPRALANAETPVKSGSVDLNGDGKAEAVSIEYDEAKDEVVLKADGASARIPGDGNAPDGLFIVDLDTRDKRKELVVRTGQTDSDARSYIYGFDGKALKPLGIVPNLTEAKGNGIILSDSWKGFWNQRDKYVLDAKTGKVSLVPQDLYAVGVEATVKQSFPLARSRTDKSAIATLAQGSTIQVLAASPPSGKGGAYLYLVKSSTGLLGWATAKDLMEKTDGLPFAG
>NZ_CP012109.1|WP_002637806.1|8602005_8602503_+|YkgJ-family-cysteine-cluster-protein
MPLNTLCLRCGMCCDGTLFTHVSLQPEEAAALQQRGMVIGSRSDGSPALTQACAALDGRACTVYSDRPASCRQYHCQLFSALAEQEVSLEEALAVVDEAHARVAAVALTLAPVSPEDAPRSVLQRARRAHLREHGGPVSAEAQATYEQAEAYLDTHFRGRFGRRG
>NZ_CP012109.1|WP_044890237.1|8599571_8601653_-|hypothetical-protein
MKPYNQNPSDNGAVMQADTLEGLSGRASMLGYRMGTELTAVASFGNLQAPCRLVQLSLEHLTLNLGTQAAPKPGETASVVLGHGERWATALDVEVMDVRGAPEVSLRFLAPPLDAGRRIVSVLEALRDNGLLLPPETRPVWKERIQHVDRVRRICDALVGRQARGMARAEGGRKVPVTAALFDARMGVIGWRFEGEIPERPFTLEAFGYSSVVHLEVREARVENGLLVMPLPEELVRYRHRWLRRAPPSRPCTLSFDHPLWPQVHVRRQVLDLSYEGLAFLTEPGEDLLYPGLRQPVLEVVTEGMAPVRLRAEVRNISSTSAGRRCGMSVRPLDAAGAHAWRALVEAQMHPATQVEGDWGEATWKLLDGSGYFRLQGKSPEDFEDSHPSFDATLARLEGRTRLGYRVVQPEGEAVGATLSVVKPYEGSWMAHQLARQPVKGSRTTAREALRDIYLRGYEPTQVDPEVKWFFAFCEANVRWVRFTKFDFATWYEHTGQTCLVPFRLMEAEVDAAWEIPAGIEVGTPTEAERAAFFEQVERTRPLAYREALDLVPDRFDMKRAKERWGEAGLGRDRELVVARHEGRPVVLAVLETAQPGLNLFNVLDGVRLVSLVDESSKEAQDAMVALLAHAADWYRARDRKVFIHYVEAACGEYVERASLADLGEGKLWVISASLLPEFLEHLFEATTPPSKA
>NZ_CP012109.1|WP_002637804.1|8598569_8599538_+|NYN-domain-containing-protein
MNGRNEEHRIALFIDFENLVTNTGISSSSFDLQPSLDRLLEKGKVVFRRAYCDWSRFAEAKIRLHEFGVELIDVPPSTRAGKNGADMRLVIDALELCYARESIDTFVIGSGDSDFCPLAYKLRENGRTVIGLAVKESTSPLFVKACDEFIYLRPRQSRSDKGDKEKGRQSVSADDGSSKRGRHGRDEKGRGDKEKASQGGGKAQAKTEKTEVPDIAREVVQSMLARATGPVNPSLIKEAIVRKEPDFDEREHGFSTFARLLAALEQQGLLRRIQQGRQWYVVAADFDVGGGDTKSKKRAPAHHHAEDDDELESYPDPDEDEG
>NZ_CP012109.1|WP_044890236.1|8597766_8598312_-|hypothetical-protein
MLDTKNVMRITCLVLLGALGGCTRAAPGDAVSTASWGHASGWVVGAVTDAAVGAPMGATVKAAGGMATLAATACSDLSRPVLALSATVLTGAQWSMAAEHTKGKRKSSWDKHTKTRSGGKEKKDSRMRFNQGADDNSKQKKEEAARKKEAEKQKKEEARQKKEAERIEREEAQRKKESAKK
>NZ_CP012109.1|WP_002637802.1|8597179_8597770_-|tetratricopeptide-repeat-protein
MTQGGLVTNRHAALSDADKRRISKRIDAFFSEQQWDALDQLISESLQGTSDDHWLHVRRADAWYARGKYAKAARLFQKVLESVPRCPLGRWGLANALMARGDTNEARKLFLSLARQKPEVMGTRECGEGVRWARGLVADAHFRLGQLEEQAGAKAAARRRYQSYLRTLELPAFTLESRKAATARLRALSLRGQSRD
>NZ_CP012109.1|WP_002637801.1|8596494_8596986_-|hypothetical-protein
MKRMHAGNWRMAATVALLTPMAVLARDPVDPTSATEGGVTAPLQYGLDRNFTNFGATMSIDRSSSGSQRNLDVGPQANGVGMPIREVTPDQDEMKRLSGKVLKLNGQMLYLETEPGAVVPLDLSALRIRKQPEKGQRVMAVYQVENTTENVALALAGERPAKD
>NZ_CP012109.1|WP_002637800.1|8595720_8596491_+|haloacid-dehalogenase-like-hydrolase
MKMERVEETLERIRIEAEQAPGGVLAFDGDGTLWSGDVGDDLFLALLEHGGIRPEAYEALERLATSHGFAPGLPARELAHQLFAAFEAGRIPEKDIYEMVAWLFAGWRVDAVRDFASDVVARREVKQRIHPETRRVVEWAQRHGIGCYVVSASPLAVVEAAVLAVGMDPMNVLACTPRTEDGTVLPSIVEPIPYAAGKVRCLRSRTDQPLYAAFGDNVFDLELLAASRVPVAIRPKPRLRARAAELPSLVQLHPED
>NZ_CP012109.1|WP_002637812.1|8610003_8610735_+|DUF429-domain-containing-protein
MSESTPRFLGWDLTDPYARVPRPVDVADVDPHGRVRFTEHPWPAVSRTRGFDTGLLLEAFPLQTKDVLVIDGPQALARPGASVREAERLLHAPGRTPDVLPEPGRPFSGFVRGSVLLFAALHAQGRHPMLDMDTPALTQARLFEAFPGATWRALAVEKLGAKASRTGRAQRLAMLEARGLRFPSGLLPTHDQLDAALCAWLGWLTRTAPEHVTAVGAPLTVDAEGWLREGRILDVRRPWPSSA
>NZ_CP012109.1|WP_044890238.1|8610777_8612988_-|hypothetical-protein
MTHATKAVGVGRWWSGILGWMLALGWVMACRDAPPLSDAVGRLRLSAQRVDFPAAYPGSLREAEVRVLNGGRAPLDVTWTEVPAPFSVEAALPVQVFAGEVPVRLRFAPQAAGTYQVTLTGTASDGGRVELVLAGEARPEPECFTPVTCATATFDKVKEQCVEAALPDGTACDPGNACLVGATCQAGRCRGVERACDDGNACTTDVCHVLDGCQSVPAPPCPSVGPCQVGTCDPRRGCSTAPAPNGTLCGGGRGTCEDVDVCLDGACVRRDLPEGFVCEAASPCQAAGQCRSGACARPPARSLSPDWQYDAQEEGQQLQDLLVGPEGDVTLSGFYGTPLLDAAGKVPVRASNPARRCMLWNDRLLCMDMPVDGTVSLLERSTGSPRWTFTLGKTRPDFRERTQTLFLARLAVMAPDRLAALFEAYPADQPRDTGCRNYFLVVLDAYGHMVSAQELTDPLLAECNHPHPFGLASDAVGGLYVAFAPTVNTGAPLESGAPTLFMAFSSDGVPRWRRTEPMRAGELAVVNGLLLPERGFQALSTRDGTPAGQTVPQPFGRVVATRDVVVPSAPGTTVNATVNSSSSPSAATELKGFRLPDLTPAWTYALRAGQHLATKELRLATFPRSAGLPPETLVLTHAMGAGNEQLLVGVRTRDGSEAFQCPLTYAPRTLPQLMELAPDTLFLMEGAMSCGECDPPFANSQPRFLRFTLPGLQPSREPWPGTFGGPGHGHHEQAAH
>NZ_CP012109.1|WP_044890239.1|8613190_8613484_+|hypothetical-protein
MTSAASSCAPASSQAFTVLIPHGLQAAVEGLPSETRQELLAELFRLAALARQEQGQLPADGPYTLRMDVAGCQVSVELEPSRSRLTLAGLMRPQPLE
>NZ_CP012109.1|WP_021781314.1|8613514_8613811_+|hypothetical-protein
MSRRAGYAESWDLTYLVEQLRELIGHDLDLGEDLSAELEDVLGSLVLRNQRLRVLQRMVNADRAPDDLAVLRGALEDMDRELMARLPALLERLRSAMP
>NZ_CP012109.1|WP_002637816.1|8614182_8615868_+|serine/threonine-protein-kinase
MPAEGFPIDFYRGERIGKYEVVTQLSVGGMAELFLGFTSGPGGFRKYVVLKRVLPDARDNAQFERMFLDEARITAAFNHPNIAQVFDLGQEDDGLYLAMEFIAGQNLNQITGACLRRKDQLPLGFTLSVARDVCMALHYAHTYTSPSGAPSPVIHRDVAQKNIMVTYDGVVKLLDFGIAKAKDSLERTSVGTVKGTTGYMSPEQVRGDKLDGRSDLFSVGVMMHELITGARLFSGKNERDEMMKILEAPIPWPSHVAPHVPEGVSKVVMQALERSREKRFATGRDMARAIEAVAGKMMLDAHDRAALMQELFTERMTATRVMLESADGTTSGVILESAKRALRSDDGPYLPERKDEATPQKGVAGMPRKPSRKVAAAQAPKKPASVDTNKTAAPVSRSSNVLWGGVLLAILGGGGFAAWHLAKALNETTEDEDASALRTLPTNDPNELLPLGPPTDAGEAHANAGPPAAPADEDSRPKTEPANARPTKGRGKLTLVVLPESDVFRGNKKLGRTPMFNVAMPAGEHELTIVGPDGKKRMLAVPIEAGATARFRLKLAEIPER
>NZ_CP012109.1|WP_002637817.1|8615944_8616913_+|glutathione-synthase
MAPLTIGFLMDPLETVRVDHDSTFALMLEAQKRGHQVRYFEQGWLRFNGTCAEARMRHVTVRRELGRHFDIHDEAPHPMSSLDVLFMRKDPPVDAEFLHATQLVELCGTGRSPVFINEPSGIRDANEKLFALRYPDLMPDTRITGELPVLLDFIANNPAGTILKPVDGFAGKGILFLSSTDRNARSAVDLLTRGGREAVVAQAYIPESRQGDKRILLVDGDPVGGVLRVPSDDDHRGNMAAGGVPRKAVLTPRDLEICARLKPELVRRGLRLVGIDVLGGYLTEVNVTSPTGLVEANHLDNVCVEATVLDVAERLVAERAAG
>NZ_CP012109.1|WP_002637818.1|8617144_8619046_+|PHB-depolymerase-family-esterase
MLKQRLRRPWPWSRFAGVSLAAGLSAAIAGCGPADESPVPPAETTLAEQQSPLLTQVTSFGSNPGNLQMFRHVPSGMPANAPLVVVMHGCTQRAAGMEGAGWSNAADVYKFYVLYPQQQSGNNMTSCFNWFEPGDINRDRGEALSIKQMVDTMKATYSIDPSRVFVVGFSAGGYMVPAMLASYPDVFSAGAIHSGGPYRCAESMNAGFSCMSPGVNRTPAAWGDLVRSAYPGYAGPRPRVSIWHGTSDYTVNVMNLTEAMEQWTNVHGIDQTPDTVETVGGFPRKVYRDGAGRALVETWELTGMGHGVAMDAQFQFPGGTGTAACGSVGAYLNDVNLCSVYHQAQFFGITGGGGGPTGDTTPPTVNVTAPANGATVSGTVNVTADAADAVGVTRVEFLVNGEVVSTDTQAPYAFAWNSAAVSNGRHTLGARAFDAAGNQATDNDTVVTVSNSGGPPAPVTVQFASILADDGYLKANADGSGAALGFMTNLALGRGTDGKYNRSFLSFDTSSLPDGATVTRAFLTVGYSSGSGDPWSTPVGNSLVIDVKTGTFNAANTEVADWAAAATASRVAVIDRFSAGTKNSADFSGAGLSAINKTGKTQLRLGFAQAQTATQYLFVRDGANAVLTVVYTP
>NZ_CP012109.1|WP_002637819.1|8619068_8620379_-|type-II-toxin-antitoxin-system-HipA-family-toxin-YjjJ
MATVEQLLTVLGRQVEIRGSELAAQLRVSRPTVSRLLASAGANVCRMGQGPATRYARARSITSLGTQIPLYRVDEAGRPHEEGTLHPLWNGGCWIEQEDGTGERFIGLPPFAADMSPQGYLGRGFALRHPELGLPPRITDWTEDHQLIALALRGDDCVGDRIIGAASLDRFLASPLRPATEGQYPELARSSMTSEAGSSAGGEQPKFTAYVEGRHVLVKFAASDDSAAAQRWRELLICEGLALDTVRAAGIPAAATRSLNVDGYQFLEVERFDRVGERGRKGLLSLKAIDNEYLGHDGKGSSWTSAARYLLQSEYIGAEDARRIRWLDTFGQLTANTDRHFGNLSFFEKGPKQFRLTPAYDMLPMMFAPVGTSIVERTFEPRPPTSETLDVWADAAQHALAYWNRLEQTQELSQAFREQCARCRDTLAELVRRAPV
>NZ_CP012109.1|WP_002637820.1|8620607_8621411_+|methyltransferase
MTEPIPPELGPDETLDSIGTAGVEVLQRKTGYRFTLDAVLLAHFAATEGAGASGRMLELGAGSGVVSFLLVKQFGLGSVDALELQPAVHARLSRAVALNACESQVKPLLGDLRRIRELVPGGQYTHVVSNPPFRLADAGVRSPDDERATSKSEVACDAPSVVAAARYALVPGGGVSLVYPAARVAEVLGLLTQAKLHPTVLRFVHARVEAPATRFLVHALRDRDRGLAVRPPLVVHGEAPGGYSAEVAALMEPPRAESARSVLPSTS
>NZ_CP012109.1|WP_002637821.1|8621430_8621691_-|hypothetical-protein
MKRQIKKALFVLLALVAAPAFAGEHHYGNGPTRESACDAAERRAERRAARLKTCYEACNVNNCKKLDDGSFTCESISSNHQGSCRR

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Crispr_ID: NZ_CP012109_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_23

8671259-8671360

Orphan

Consensus_repeat	Method
GATGCGTTCACCATTCATCTGGAGCACCCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_23

>merge|NZ_CP012109|23|8671259-8671360|CRISPRCasFinder
GATGCGTTCACCATTCATCTGGAGCACCCCGACGCATCGATGGACCCGCCTGGTGAGAACAGGCTCATGCGGATGCGTTCATCATTCATCTGGAGCACCCCG

>NZ_CP012109|23|18|8671259-8671360|CRISPRCasFinder
GATGCGTTCACCATTCATCTGGAGCACCCCG	ACGCATCGATGGACCCGCCTGGTGAGAACAGGCTCATGCG
GATGCGTTCATCATTCATCTGGAGCACCCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002640363.1\|8665311_8666568_-\|multidrug-effflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340878
NZ_CP012109.1\|WP_002637851.1\|8659476_8660454_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381328
NZ_CP012109.1\|WP_002640372.1\|8679481_8680273_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|379293
NZ_CP012109.1\|WP_002640367.1\|8670351_8670534_+\|DUF3592-domain-containing-protein	unknown	unknown	gnl\|CDD\|378822
NZ_CP012109.1\|WP_044890243.1\|8681231_8681684_+\|bactofilin-BacM	unknown	unknown	gnl\|CDD\|377376
NZ_CP012109.1\|WP_002640377.1\|8682809_8683835_-\|L-histidine-N(alpha)-methyltransferase	unknown	unknown	gnl\|CDD\|378355
NZ_CP012109.1\|WP_002637850.1\|8657363_8659154_-\|signal-peptide-peptidase-SppA	unknown	unknown	gnl\|CDD\|273226
NZ_CP012109.1\|WP_044890244.1\|8681686_8682232_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044890241.1\|8656703_8657297_+\|cysteine-dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|380416
NZ_CP012109.1\|WP_002640373.1\|8680334_8681228_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
NZ_CP012109.1\|WP_002640380.1\|8686120_8686642_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002640381.1\|8686761_8687142_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197775
NZ_CP012109.1\|WP_002640366.1\|8669247_8669901_+\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|234637
NZ_CP012109.1\|WP_002640379.1\|8685379_8685580_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002640376.1\|8682504_8682696_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_021781320.1\|8664443_8665223_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP012109.1\|WP_144429669.1\|8663525_8664257_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002640382.1\|8687168_8690027_-\|terpene-cyclase/mutase-family-protein	unknown	unknown	gnl\|CDD\|238362
NZ_CP012109.1\|WP_002640365.1\|8667302_8669150_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	unknown	unknown	gnl\|CDD\|235362
NZ_CP012109.1\|WP_002637852.1\|8660574_8663445_+\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002640363.1\|8665311_8666568_-\|multidrug-effflux-MFS-transporter	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.27068e-98
NZ_CP012109.1\|WP_002637851.1\|8659476_8660454_+\|aldo/keto-reductase	gnl\|CDD\|381328	cd19102, AKR_unchar, uncharacterized aldo-keto reductase (AKR) superfamily protein. This family includes a group of uncharacterized AKR superfamily proteins. Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance in both health and industrial applications.	3.94131e-169
NZ_CP012109.1\|WP_002640372.1\|8679481_8680273_+\|ParA-family-protein	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	1.06713e-92
NZ_CP012109.1\|WP_002640367.1\|8670351_8670534_+\|DUF3592-domain-containing-protein	gnl\|CDD\|378822	pfam12158, DUF3592, Protein of unknown function (DUF3592). This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 150 and 242 amino acids in length.	4.91767e-07
NZ_CP012109.1\|WP_044890243.1\|8681231_8681684_+\|bactofilin-BacM	gnl\|CDD\|377376	pfam04519, Bactofilin, Polymer-forming cytoskeletal. This is a family of bactofilins, a functionally diverse class of cytoskeletal, polymer-forming, proteins that is widely conserved among bacteria. In the example species C. crescentus, two bactofilins assemble into a membrane-associated laminar structure that shows cell-cycle-dependent polar localization and acts as a platform for the recruitment of a cell wall biosynthetic enzyme involved in polar morphogenesis. Bactofilins display distinct subcellular distributions and dynamics in different bacterial species, suggesting that they are versatile structural elements that have adopted a range of different cellular functions.	5.98145e-31
NZ_CP012109.1\|WP_002637850.1\|8657363_8659154_-\|signal-peptide-peptidase-SppA	gnl\|CDD\|273226	TIGR00705, Protease_4, signal peptide peptidase SppA, 67K type. This model represents the signal peptide peptidase A (SppA, protease IV) as found in E. coli, Treponema pallidum, Mycobacterium leprae, and several other species, in which it has a molecular mass around 67 kDa and a duplication such that the N-terminal half shares extensive homology with the C-terminal half. This enzyme was shown in E. coli to form homotetramers. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both. [Protein fate, Degradation of proteins, peptides, and glycopeptides].	7.92873e-99
NZ_CP012109.1\|WP_002640377.1\|8682809_8683835_-\|L-histidine-N(alpha)-methyltransferase	gnl\|CDD\|378355	pfam10017, Methyltransf_33, Histidine-specific methyltransferase, SAM-dependent. The mycobacterial members of this family are expressed from part of the ergothioneine biosynthetic gene cluster. EGTD is the histidine methyltransferase that transfers three methyl groups to the alpha-amino moiety of histidine, in the first stage of the production of this histidine betaine derivative that carries a thiol group attached to the C2 atom of an imidazole ring.	4.78307e-160
NZ_CP012109.1\|WP_044890241.1\|8656703_8657297_+\|cysteine-dioxygenase-family-protein	gnl\|CDD\|380416	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain. This family contains cysteine dioxygenase (CDO; EC 1.13.11.20), which catalyzes the conversion of cysteine to cysteine sulfinic acid, the first step in the biosynthesis of essential oxidized cysteine metabolites such as sulfate, hypotaurine, and taurine. CDO also plays an important role in the regulation of intracellular cysteine levels in mammals; CDO expression is altered in cancer cells, and abnormal or deficient CDO activity has been linked to Parkinson's disease, Alzheimer's disease, and rheumatoid arthritis. CDO is an iron-dependent thiol dioxygenase that uses molecular oxygen to oxidize the sulfhydryl group of cysteine to generate cysteine sulfinic acid. The CDO active site contains an amino acid-derived cofactor. These enzymes are found in prokaryotes as well as eukaryotes and belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	4.68576e-28
NZ_CP012109.1\|WP_002640373.1\|8680334_8681228_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	2.60882e-82
NZ_CP012109.1\|WP_002640381.1\|8686761_8687142_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	3.76102e-12
NZ_CP012109.1\|WP_002640366.1\|8669247_8669901_+\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	1.02727e-59
NZ_CP012109.1\|WP_021781320.1\|8664443_8665223_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.20671e-24
NZ_CP012109.1\|WP_002640382.1\|8687168_8690027_-\|terpene-cyclase/mutase-family-protein	gnl\|CDD\|238362	cd00688, ISOPREN_C2_like, This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement. Class II terpene cyclases include squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY), these integral membrane proteins catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. The protein prenyltransferases include protein farnesyltransferase (FTase) and geranylgeranyltransferase types I and II (GGTase-I and GGTase-II) which catalyze the carboxyl-terminal lipidation of Ras, Rab, and several other cellular signal transduction proteins, facilitating membrane associations and specific protein-protein interactions. Alpha (2)-M is a major carrier protein in serum and involved in the immobilization and entrapment of proteases. PZP is a pregnancy associated protein. Alpha (2)-M and PZP are known to bind to and, may modulate, the activity of placental protein-14 in T-cell growth and cytokine production thereby protecting the allogeneic fetus from attack by the maternal immune system.	2.42464e-16
NZ_CP012109.1\|WP_002640365.1\|8667302_8669150_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	gnl\|CDD\|235362	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG.	0
NZ_CP012109.1\|WP_002637852.1\|8660574_8663445_+\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	2.75025e-68

>NZ_CP012109.1|WP_002640367.1|8670351_8670534_+|DUF3592-domain-containing-protein
MASSEPEYPQGATVPVLYLPDAPEEGRIGLFSELWLGSWVSGLVTVLLRAFTFVAWHFEL
>NZ_CP012109.1|WP_002640366.1|8669247_8669901_+|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MDNARFVDRLTAGCQSLGVTVAEDVGPRLQRLMAELLKWNAKVNLTAITAPEEVLEKHFLDSLAVLPEVTGAATLLDLGAGAGFPGLPLKLALPSMGVTLVDTVGKKVAFIKAAAASLGLQGVRGLHARAEGQPETEGIPRAEVLIARAFMDLPDWLALAPAYVEPGGRVVAMLGKQQTDAELAARAAERQLRVVSSRSYRLPFSGAERQVAVFAKE
>NZ_CP012109.1|WP_002640365.1|8667302_8669150_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG
MGLRYDVIVVGLGHAGCEAALACARMGLATLGLTLKRERSAVMSCNPAVGGTAKGHLVRELDALGGEMGRAADKAGTHFKTLNASKGPAVQASRLLCDRDAYAAGMQEVLFSQPNLTVREGEVAQVVAGGGRVEGVVLKDGTQVAASAVLLTTGTFLQALMHVGEQKEVGGRLGDEAARGLSESLRALGFTLGRFKTGTPARLARASIDWAVLEPQPGDTVVRPFSWRTKREGEGGMPFPRQPEVMCALTATTARTHEVLRDNLHRSPLYQGDIVGRGPRYCPSLEDKVVRFAARERHQVFLEPEGPTSPLVYPAGLSTSLPADVQLTFLRTIPGLEQVEVVRFGYAVEYDYAPPTQLKSTLETKAITGLYFAGQLNGTSGYEEAAFQGLWAGINAALQVKGEPPLQPGRDEAHGAVLVDDLVTKGVDEPFRMFTSRSEHRLKLREGNADLRLARHGHRVGLLPREALERAEARGRAVTEEVARLKRTGLAAKLRRPEVTYAQLSEAQEAWPRLPPDVAEEVEVEVKYEGYIAQAERAAAREAESTDRWRIPEGYRFSEVRGLGAEAVEKLTAHQPGTVGQARRIPGVTPAAVSLLLVALKRGTGAPEVCSQPEK
>NZ_CP012109.1|WP_002640363.1|8665311_8666568_-|multidrug-effflux-MFS-transporter
MTTSSNTPSARGTLGLELLLGTLTAFAPLSIDMYLPALPRIAEDLGSSAPVVQLTLASCFAGLALGQLFTGPLIDRFGRTRPLYAGLALYVLGSLGCALVPTAEALVAMRFVQALGGSVALVVPRAVVRDLWSGADAARTMSRLMLVMGVAPILAPLLGGFVLQYSGWRAIFLVLAAVGAVALAFVLKTLPETAPPHSGSQTVLSRLGAIVKDPDFVGPALAGGFAQAGMFAYIAGSPFVFISLYGVPEAHFGWFFGANAMGLIAVAQLNRKLVTHLPLHRVLRLALSLCVITAVGVVAVAWTGFMGLWGIAVTLFLFVSAMGLVGPNAAAIALERHATRAGIASAALGALQFTAAAGASWAVSTFNNGTAMPMAGVMAAMAMLAWLAAFFGLRLRTRQQGAGEASGMASGQGSARAG
>NZ_CP012109.1|WP_021781320.1|8664443_8665223_-|alpha/beta-hydrolase
MTSNSRTVQGPAGRLAVTETGSGGLPVVFVHSNAGRREQWAAQQAHLKQRSVSLDLRGVGESDLDDQGRYGAEAVAEDVQAVADALGLERFVLVGHSFGGNVVGEYARRWPERLAGLVIVDAAGTMPPLPPEQLEGFHQGTRPESYRAFMDAWYTPPLQNAKPHTHESVMRWLHTTPREVVVGALESMLTYDSDRVLAHYKGPFQTLVVDAFIQPNAYHLMYPGTPHTVFSGVSHWLMMDDPERFNAALDAFLATLPQR
>NZ_CP012109.1|WP_144429669.1|8663525_8664257_-|hypothetical-protein
MRQLRRTCLASVIVFAATGCTTTLYKPNQVSAPLLREKGEVKGTLGNNNLQVAWSPTEGVGLLAQGYYERYAEGERRATGALGEVGGGFYGTFLDNAVWETYGGLGYGQSTASDRLDLNSATPRDVGFTARAVRAFIQPNLGYVTPYFEVAGSVRLSAVKYVSLNANGYTDAERTQEFLVARDVTRPVWLFAEPALTVKGGYKWVKLYAQRAWSFKLGGEALPHERDSTVVGISVDVASWYND
>NZ_CP012109.1|WP_002637852.1|8660574_8663445_+|insulinase-family-protein
MHSKTTREDRMKRRTPLSLVAALMMVAGTPVWAQTPSPAPKAAQATASKAAAPQSKAKGRAPAAVNSVEGITEYRLPNGMKVLLFPDPTKPTVTVNVTYFVGSKHEGYGETGMAHLLEHLMFKGTPTTRNVPQALTERGARPNGTTWLDRTNYYETLPASDANLRWALSFEADRMVNSFIAKKDLDSEMTVVRNEFESGENDPRGILFERVMSAAYIWHSYGKATIGARSDLENVPIDRLQAFYRKYYRPDNAMLVVAGRFDEAKALSMIQDTFGKLKKPAQPLPATYTAEPTQDGEREVQLRRVGDTALLTSLYHVPEGAHEDFAAIDVLTLAMGNNPSGRLFKAMVETKKAARVGASNLQLRDPGVLVFNAEMREDQPTAAARETLLKTVEEASRTPFTAEEVDRAKATLSKYIDLTINNSERVAIMLSEWEATGDWRLLFLHRDRIEAVKPEDVTRVAAEYLKPSNRTLGTFIPTPKPDRAELPAPVNVATMMEGYKGRAAVAQGEAFDPSPANIESRVQRGELPGGVQYALLPKKTRGNMVNVSLTLRWGTEAALRGQADAASYAGRMLMRGTKHRTRQQLQDAFDKLKARVGVDGSSTGASASIECPRESLPEVLKLVTEVLREPAYDEKEFAMLKQERLAALESERSEPQTLGNIAFWRAVSGHYTKGHPYYVATLDERIAGVRDTTLEQARAFHKSFYGASNGELAVVGDFEPKDVVPVVSELLGKWKSPAPYQRVPQVFSDGKPTSVALETPDKANAYYMAGQALKLRKDDADWPALTLGNFVLGGGFLNSRLATRIRQQDGLSYGVASSLDASDVDEVGSFFTYAIYAPENAARLETAMREEVTRAVQKGYSAEELQKARSGMLEYRQSARAQDGTLARQLASYLFLGRTLAFDAEFEKKLAQLKPEDVRKAMERHFNWDKVTQVRAGDFATAQKKASGAAKAPAAP
>NZ_CP012109.1|WP_002637851.1|8659476_8660454_+|aldo/keto-reductase
MQTRRLGNSGMDITRLGFGAWAIGGGGWQFAWGPQDDAQSIQAIRHAVERGIGWIDTAAVYGLGHSEELVAQALEGMSQRPYVFTKCGMVWDARGRITRSLKADSIRRECEASLRRLKVDAIDLYQIHWPVESQAECEEGWSTMAALQREGKVRWIGVSNFDARQLERIHAIAPVTSLQPRYSLIHRDIESSTLPFCERNGIGVIAYSPMASGLLTGKMTRERVGAFPQDDWRRHSADFQEPGLTRNLVLAELLREVGRRLGRSPAEVALAWVLRHSSITGAIVGARSAEQVDGFVGAGDLRLSPDTLRDIEAHLQGASRGDAHA
>NZ_CP012109.1|WP_002637850.1|8657363_8659154_-|signal-peptide-peptidase-SppA
MKRFFIGALAFVGALSVLFVVGLVGLMVLASASKPSVPSNLVLELDLENPLPENSAGDSLAGAFGEEPATVRDVVDALEKAGSDARVKALVVRIGQTGTPAATQEIRDAVKAFRAKGKKTVAYSDTFGELGNSTLSYYLASAFDEIYIQPSGDLNITGLAFELPFARDAFAKLGVTPQYSARYEYKNAVNSFTEQDFTAPHREATERFTQSLFEQMVRGIAEERGLTEDVVRGLIDKAPLMASEALEGKLVTGLRYRDEVMGELKAQAGDGARFLYVEKYLERAGRPHVVGDTIALVYGVGEVARGKNRSNPLSGGQGMGAESVAAALRKATEDSRVKAIILRVDSPGGSYVASDTIRREVQRAKEAGKPVIATMGGYAASGGYYVAMEADRIVAQPGTLTGSIGVYAGKFVTADLWHKLGVNFDTVSVGKNAEMYGSDAVFTPEQQARLDATLDRIYEDFTTRAAAGRKLPLEKLQSLAKGRVWTGEDALANGLVDALGGYPKALELAKEAAKLPADARVNVQVYPRKKPASAVLSELLGQRGENSEDDAVTVSALSPWGGLVAGLRQVYAVGAKLGLVEGHRGELYAPMPEASW
>NZ_CP012109.1|WP_044890241.1|8656703_8657297_+|cysteine-dioxygenase-family-protein
MRAMCLGEWVELLREKAGGMPGLVGVGEGLAGLVLKPSSLQPYLHFRRGRYTRNLVYRDAQLEVLLNCWDAGAVSPIHDHDGQECWFSVQSGAFLLENYPLESGGLSPGPARLGAPTAVGPVGAGHVDFRCPEAPIHRVTATQGPAVSLHVYAGPVDRCLVFDPRRQRCVSRELRYHSVFGRPLAPLEGTTQPPALF
>NZ_CP012109.1|WP_002640372.1|8679481_8680273_+|ParA-family-protein
MGRIICISNQKGGVGKTTTAINLAASLASAERRTLLVDMDPQGNAGSGLGIKQDNITGTIYEALLNDRPIKELLHPTELRYLQVVPATPDLTGAEVELVNQDNREFRLRDALRPLASEYDYIIIDCPPSLGLLTLNALAAADSVLIPLQCEYYALEGLSQLTHTIDLVKQGLNPDLKMEGILLTMFDSRANIAHQVVEEVRGYFKKQVFEVIVPRNVRLSECPSFGKPIILYDIKSKGCESYLALGRELMKRDTPKSPRRRVA
>NZ_CP012109.1|WP_002640373.1|8680334_8681228_+|ParB/RepB/Spo0J-family-partition-protein
MVKADAQKRALGRGLSALIPQAGAGGSGKGGEQAAKAGVLKLPIESIHRDKEQPRTYFDEEKLKELSDSIKAQGVLQPILVRKDGDGYRIIAGERRWRASQAAGLKEVPAIVRDVTEVQAFELALVENLQRADLNPIEEAEGYKRLVEEFKLTQEQVSVRVGKERSTVANALRLLALPADVKGMVADGTLSMGHARALLGVPRLPELQNLAKQVAEKKLSVRDTERLVQQSRPNGKKDAGKAAPKQSPQVKSLVEELQRRLGTKVRLTERSPGKGTIEVDFFSYDDLDRLLKLLRKE
>NZ_CP012109.1|WP_044890243.1|8681231_8681684_+|bactofilin-BacM
MALLGGKKDEASSKPLFRREEESVSQRSGEVHTLLGKGSEFEGKLTFEGQVRIDGKFQGQIITKDVLVIGDGAKVQAEIQAGTVIINGQVEGNVKATQIIELKTPGRVKGNLETPSLSMDRGVIFEGSLKMENLGTTGARPPPPPGSEKK
>NZ_CP012109.1|WP_044890244.1|8681686_8682232_+|hypothetical-protein
MQHRKHMAPAALLALTLLGGCKGCNPDGAASGSGEGKDRASSLRSGVKVPLPDGWSAQVAPDESFQAGPPGRPVLRVDLKRGDGEQMPSADTLADRVRDELKDFELSFDQEESSDRYALVRITLAPRLEDGGVGQEAPGFFGARRVDGDLFLCASLPGASPEEVRLATEACRAISVQGSLP
>NZ_CP012109.1|WP_002640376.1|8682504_8682696_+|hypothetical-protein
MSFSGMLPLQLATVDIAPVGEQLIAVGGLVVAGLGALWAAWTRPSPQPVPVPVRSGPRRNPRR
>NZ_CP012109.1|WP_002640377.1|8682809_8683835_-|L-histidine-N(alpha)-methyltransferase
MRVTTVPTVATPGDNAQQTPGVQVDVYVKPGDAKRALREEALQGLCGTPKELSPKWLYDERGSQLFDDITRLPEYYPTRREREILLAHAGDIARLSGADTLIELGSGTSEKTRLLLDALEEAGRLARFVPFDVSEAFLRRAATGLAREYPGITVHAVVGDFERHLGQLPGGGRRLVAFLGGTIGNLKPAQRALFLRQLSAGLQPGDGLLLGTDLIKDRERLYAAYNDSAGVTAEFNRNVLKVLNRELGADFDVEAFDHFAPFDEKNAWVEMRLVSRKAQTVRLSHLHKQVDFAEGEVLRTEVSCKFHQQQVAAELSEAGLELSQWWTDAAGDFALSLSFKR
>NZ_CP012109.1|WP_002640379.1|8685379_8685580_-|hypothetical-protein
MTAETFHALQQVLERLGDPALREPPSDEGLVARHLVPQHGLELEYAWDERSRTLTLLGLARVPLSP
>NZ_CP012109.1|WP_002640380.1|8686120_8686642_+|hypothetical-protein
MARRRYTPWSATNGLLFGMAAGVVLALAEVVLAVATGDSPMRPVRMSAGVLLGPPAFTQQVSDGTALLLGVGVHLVASAVVGLFYSVLDAFLPPDGRGRWEFQSAVGMLYGIFVWLVNFQFIGRGSYPWFLDVPQFPQIVMHAVFLGLPLASLFTAAERRRLLLDAAESTPAG
>NZ_CP012109.1|WP_002640381.1|8686761_8687142_+|helix-turn-helix-domain-containing-protein
MDTELASMLGAASRAARVRMGLTQADVAERIGMASEVYGRLERGHMLPSVQNLRRLCMVLNVPPHELLGLGEGFTAPPPVKEKAAAKNREDDTPEMRRLMRNLRKLSAVQLKLMNLVASAMQHKKK
>NZ_CP012109.1|WP_002640382.1|8687168_8690027_-|terpene-cyclase/mutase-family-protein
MPSHVAFLHPPRSTLALSTFVLVSLTGLLLSNTARAATNAESAQRAINFLSADAENWSARFGCTSCHRHGAAMFGLTNARTKGYDLDALTYNGRTNRQNLDAIMARVVSEQRADGSWYHEDIHYPNAKSSYSAFGLAGYDAHLGTRYSDVLVLAADWSLTRQDANGRWREDFPFYPVGYGNVGITARMMTAVAQAQQRVDPAKAARYQAALDRAATYVRAHMNDLTDGPDEDGQRYTHQVAWAMVGLKAAGPGAGGENTQALASLATRLLSTRAGGGAPGWGSLEGDAPDEFATGISLYALCLAGETPGEHARMADALEWLKARQAPDGSWGASTRYPDIPTTFASLGLACFGDYSVGVTVSGGTRQPFEHDLPRVQSVTYPVTVRNHGYRTDSYRLSTQGGLTGWTATLNRTTLELGPGAEANLLLTITAPEGLEPSLTSDVMVVAASVEAAGVRGSVRVTTYTNPPPPTEGVPTTTTILSPANGELTVALSNTLSARVEDARGWEARGPGMGVVTFSVAGVTVGADNDADGDGVYSIVWRPRASTWSELGAQDLRAVYSGVTLAPARENRLGSTASFAVTVHPSPFPAPSVTLCGLPDFTDALTLEVCGFVTPLAPGAEIDSATFVIQGVSHPVAPDPSGGFVDTVLPLVDGPNVIRLVATDSFGGIASEEATVMVDNTAPSVTFLSPTNGQAMTTYSVDVRMVVRDWSPVRVETNWVQVTDVPAGGGDVTHRVDLWPGENLILVRATDSVGHVTEHMLMVWVDAETPWVSTGLPDGWLVGPQPGDTLPYDIGVYSASSTTVTLSTGRTYALPRGGGGVQATLDLVPGDNTFTIDVTSETGMRTTLSRTVRYDNSAPEAELLLPVPGQTYSGVIQLTARVTDTLSGVRGVAFTRDGSGIRAAALQPDGTWTAELDTRELVDGEHTVEVWMDDHAGNFVIQTFPFFTRNTP

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Crispr_ID: NZ_CP012109_24

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_24

8673982-8675011

Orphan

Consensus_repeat	Method
GTTCCACGTGGAACACG	PILER-CR

13 spacers

The CRISPR arrays of NZ_CP012109_24

>merge|NZ_CP012109|24|8673982-8675011|PILER-CR
GTTCCACGTGGAACACGAAGAGGTGAGCACTCCAAGGTGGAGCGGATGGCGTGAGGTGCCTGCGCTCATCTCGACCTGGGTTCCACGTGGAACACGAAGAAGCGAACTCGCCCACGCTGAACGGGCGATGGGCAGTGCGCGCCCATTCCCTCATGGTTCCACGTGGAACGCGAAGAGACACCCGCGCGCCCATGCCGAAGAACTGGTGTGGAGTGCTCGGGAACGAGCAGCGGCCCGTTCCACGTGGAACACGAAGAAGCGAACTCTCGCGTTGAACGAGCGGTGTGGAGTGCCTGTTCATCCCTTCCTTGGTTCCACGTGGAACGCGAAGAGGCACGCGCGTGTTCATGCCGCAGCGCCGGTGTGCAGTTCATGGCAACGGCCTTGGCCCGTTCCACGTGGAACACGAAGAGACGCGTGCGCTCATGCCGAAGAGTCGGTGTGGAGTGCGTGCGCATCCCTTCGTTGGTTCCACGTGGAACGCGAAGAGGCACGCGCGGGTTCATGCCGAAGAGTCGGTGTGGAGTGAGTGCCCATCCCTTCGTTGGTTCCACGTGGAACACGAAGAGACGCGTGCGCTCATGCCGAAGCGCCGGCGTGGAGTGCCGGCGCATCCCTTCCTTGGTTCCACGTGGAACACGAAGCGATGCGTGCGCTCATGCCGAGCAGTTGGTGTGGAGTGCGCGCCCATCCCTTCGTTGGTTCCACGTGGAACGCGAAGAACCGATGCATGCGCATGTTGAGCAGGTGCTTGGGGAACTCGCTCAACTCGACATCGGTTCCACGTGGAACACGAAGTGGTGTGCGCGCGATGCGTGGAGGCCACGTCGCTCATGCGACCGGGCCCTTCGGACGTTCCACGTGGAACGAGAAGAGGACTGGTGTTCGATGTCAGCGAGCGGTGGTTCTTGGCCGCATGCCCCGTTAGCGCTGGTTCCACGTGGAACACGAAGCGGCATTCCGCGGCACTTGGCGGTGGGTCGTGTTGGGGGCGTGCGCTCAACCCATCGCTGGTTCCACGTGGAACACG

>NZ_CP012109|24|2|8673982-8675011|PILER-CR
GTTCCACGTGGAACACG	AAGAGGTGAGCACTCCAAGGTGGAGCGGATGGCGTGAGGTGCCTGCGCTCATCTCGACCTGG
GTTCCACGTGGAACACG	AAGAAGCGAACTCGCCCACGCTGAACGGGCGATGGGCAGTGCGCGCCCATTCCCTCATG
GTTCCACGTGGAACGCG	AAGAGACACCCGCGCGCCCATGCCGAAGAACTGGTGTGGAGTGCTCGGGAACGAGCAGCGGCCC
GTTCCACGTGGAACACG	AAGAAGCGAACTCTCGCGTTGAACGAGCGGTGTGGAGTGCCTGTTCATCCCTTCCTTG
GTTCCACGTGGAACGCG	AAGAGGCACGCGCGTGTTCATGCCGCAGCGCCGGTGTGCAGTTCATGGCAACGGCCTTGGCCC
GTTCCACGTGGAACACG	AAGAGACGCGTGCGCTCATGCCGAAGAGTCGGTGTGGAGTGCGTGCGCATCCCTTCGTTG
GTTCCACGTGGAACGCG	AAGAGGCACGCGCGGGTTCATGCCGAAGAGTCGGTGTGGAGTGAGTGCCCATCCCTTCGTTG
GTTCCACGTGGAACACG	AAGAGACGCGTGCGCTCATGCCGAAGCGCCGGCGTGGAGTGCCGGCGCATCCCTTCCTTG
GTTCCACGTGGAACACG	AAGCGATGCGTGCGCTCATGCCGAGCAGTTGGTGTGGAGTGCGCGCCCATCCCTTCGTTG
GTTCCACGTGGAACGCG	AAGAACCGATGCATGCGCATGTTGAGCAGGTGCTTGGGGAACTCGCTCAACTCGACATCG
GTTCCACGTGGAACACG	AAGTGGTGTGCGCGCGATGCGTGGAGGCCACGTCGCTCATGCGACCGGGCCCTTCGGAC
GTTCCACGTGGAACGAG	AAGAGGACTGGTGTTCGATGTCAGCGAGCGGTGGTTCTTGGCCGCATGCCCCGTTAGCGCTGGTT
CCACGTGGAACACGAAG	CGGCATTCCGCGGCACTTGGCGGTGGGTCGTGTTGGGGGCGTGCGCTCAACCCATCGCTGGTT
CCACGTGGAACACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002640363.1\|8665311_8666568_-\|multidrug-effflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340878
NZ_CP012109.1\|WP_002637851.1\|8659476_8660454_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381328
NZ_CP012109.1\|WP_002640372.1\|8679481_8680273_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|379293
NZ_CP012109.1\|WP_002640367.1\|8670351_8670534_+\|DUF3592-domain-containing-protein	unknown	unknown	gnl\|CDD\|378822
NZ_CP012109.1\|WP_044890243.1\|8681231_8681684_+\|bactofilin-BacM	unknown	unknown	gnl\|CDD\|377376
NZ_CP012109.1\|WP_002640377.1\|8682809_8683835_-\|L-histidine-N(alpha)-methyltransferase	unknown	unknown	gnl\|CDD\|378355
NZ_CP012109.1\|WP_002637850.1\|8657363_8659154_-\|signal-peptide-peptidase-SppA	unknown	unknown	gnl\|CDD\|273226
NZ_CP012109.1\|WP_044890244.1\|8681686_8682232_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044890241.1\|8656703_8657297_+\|cysteine-dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|380416
NZ_CP012109.1\|WP_002640373.1\|8680334_8681228_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
NZ_CP012109.1\|WP_002640380.1\|8686120_8686642_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002640381.1\|8686761_8687142_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197775
NZ_CP012109.1\|WP_002640366.1\|8669247_8669901_+\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|234637
NZ_CP012109.1\|WP_002640379.1\|8685379_8685580_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002640376.1\|8682504_8682696_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_021781320.1\|8664443_8665223_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP012109.1\|WP_144429669.1\|8663525_8664257_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002640382.1\|8687168_8690027_-\|terpene-cyclase/mutase-family-protein	unknown	unknown	gnl\|CDD\|238362
NZ_CP012109.1\|WP_002640365.1\|8667302_8669150_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	unknown	unknown	gnl\|CDD\|235362
NZ_CP012109.1\|WP_002637852.1\|8660574_8663445_+\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002640363.1\|8665311_8666568_-\|multidrug-effflux-MFS-transporter	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.27068e-98
NZ_CP012109.1\|WP_002637851.1\|8659476_8660454_+\|aldo/keto-reductase	gnl\|CDD\|381328	cd19102, AKR_unchar, uncharacterized aldo-keto reductase (AKR) superfamily protein. This family includes a group of uncharacterized AKR superfamily proteins. Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance in both health and industrial applications.	3.94131e-169
NZ_CP012109.1\|WP_002640372.1\|8679481_8680273_+\|ParA-family-protein	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	1.06713e-92
NZ_CP012109.1\|WP_002640367.1\|8670351_8670534_+\|DUF3592-domain-containing-protein	gnl\|CDD\|378822	pfam12158, DUF3592, Protein of unknown function (DUF3592). This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 150 and 242 amino acids in length.	4.91767e-07
NZ_CP012109.1\|WP_044890243.1\|8681231_8681684_+\|bactofilin-BacM	gnl\|CDD\|377376	pfam04519, Bactofilin, Polymer-forming cytoskeletal. This is a family of bactofilins, a functionally diverse class of cytoskeletal, polymer-forming, proteins that is widely conserved among bacteria. In the example species C. crescentus, two bactofilins assemble into a membrane-associated laminar structure that shows cell-cycle-dependent polar localization and acts as a platform for the recruitment of a cell wall biosynthetic enzyme involved in polar morphogenesis. Bactofilins display distinct subcellular distributions and dynamics in different bacterial species, suggesting that they are versatile structural elements that have adopted a range of different cellular functions.	5.98145e-31
NZ_CP012109.1\|WP_002637850.1\|8657363_8659154_-\|signal-peptide-peptidase-SppA	gnl\|CDD\|273226	TIGR00705, Protease_4, signal peptide peptidase SppA, 67K type. This model represents the signal peptide peptidase A (SppA, protease IV) as found in E. coli, Treponema pallidum, Mycobacterium leprae, and several other species, in which it has a molecular mass around 67 kDa and a duplication such that the N-terminal half shares extensive homology with the C-terminal half. This enzyme was shown in E. coli to form homotetramers. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both. [Protein fate, Degradation of proteins, peptides, and glycopeptides].	7.92873e-99
NZ_CP012109.1\|WP_002640377.1\|8682809_8683835_-\|L-histidine-N(alpha)-methyltransferase	gnl\|CDD\|378355	pfam10017, Methyltransf_33, Histidine-specific methyltransferase, SAM-dependent. The mycobacterial members of this family are expressed from part of the ergothioneine biosynthetic gene cluster. EGTD is the histidine methyltransferase that transfers three methyl groups to the alpha-amino moiety of histidine, in the first stage of the production of this histidine betaine derivative that carries a thiol group attached to the C2 atom of an imidazole ring.	4.78307e-160
NZ_CP012109.1\|WP_044890241.1\|8656703_8657297_+\|cysteine-dioxygenase-family-protein	gnl\|CDD\|380416	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain. This family contains cysteine dioxygenase (CDO; EC 1.13.11.20), which catalyzes the conversion of cysteine to cysteine sulfinic acid, the first step in the biosynthesis of essential oxidized cysteine metabolites such as sulfate, hypotaurine, and taurine. CDO also plays an important role in the regulation of intracellular cysteine levels in mammals; CDO expression is altered in cancer cells, and abnormal or deficient CDO activity has been linked to Parkinson's disease, Alzheimer's disease, and rheumatoid arthritis. CDO is an iron-dependent thiol dioxygenase that uses molecular oxygen to oxidize the sulfhydryl group of cysteine to generate cysteine sulfinic acid. The CDO active site contains an amino acid-derived cofactor. These enzymes are found in prokaryotes as well as eukaryotes and belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	4.68576e-28
NZ_CP012109.1\|WP_002640373.1\|8680334_8681228_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	2.60882e-82
NZ_CP012109.1\|WP_002640381.1\|8686761_8687142_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	3.76102e-12
NZ_CP012109.1\|WP_002640366.1\|8669247_8669901_+\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	1.02727e-59
NZ_CP012109.1\|WP_021781320.1\|8664443_8665223_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.20671e-24
NZ_CP012109.1\|WP_002640382.1\|8687168_8690027_-\|terpene-cyclase/mutase-family-protein	gnl\|CDD\|238362	cd00688, ISOPREN_C2_like, This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement. Class II terpene cyclases include squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY), these integral membrane proteins catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. The protein prenyltransferases include protein farnesyltransferase (FTase) and geranylgeranyltransferase types I and II (GGTase-I and GGTase-II) which catalyze the carboxyl-terminal lipidation of Ras, Rab, and several other cellular signal transduction proteins, facilitating membrane associations and specific protein-protein interactions. Alpha (2)-M is a major carrier protein in serum and involved in the immobilization and entrapment of proteases. PZP is a pregnancy associated protein. Alpha (2)-M and PZP are known to bind to and, may modulate, the activity of placental protein-14 in T-cell growth and cytokine production thereby protecting the allogeneic fetus from attack by the maternal immune system.	2.42464e-16
NZ_CP012109.1\|WP_002640365.1\|8667302_8669150_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	gnl\|CDD\|235362	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG.	0
NZ_CP012109.1\|WP_002637852.1\|8660574_8663445_+\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	2.75025e-68

>NZ_CP012109.1|WP_002640367.1|8670351_8670534_+|DUF3592-domain-containing-protein
MASSEPEYPQGATVPVLYLPDAPEEGRIGLFSELWLGSWVSGLVTVLLRAFTFVAWHFEL
>NZ_CP012109.1|WP_002640366.1|8669247_8669901_+|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MDNARFVDRLTAGCQSLGVTVAEDVGPRLQRLMAELLKWNAKVNLTAITAPEEVLEKHFLDSLAVLPEVTGAATLLDLGAGAGFPGLPLKLALPSMGVTLVDTVGKKVAFIKAAAASLGLQGVRGLHARAEGQPETEGIPRAEVLIARAFMDLPDWLALAPAYVEPGGRVVAMLGKQQTDAELAARAAERQLRVVSSRSYRLPFSGAERQVAVFAKE
>NZ_CP012109.1|WP_002640365.1|8667302_8669150_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG
MGLRYDVIVVGLGHAGCEAALACARMGLATLGLTLKRERSAVMSCNPAVGGTAKGHLVRELDALGGEMGRAADKAGTHFKTLNASKGPAVQASRLLCDRDAYAAGMQEVLFSQPNLTVREGEVAQVVAGGGRVEGVVLKDGTQVAASAVLLTTGTFLQALMHVGEQKEVGGRLGDEAARGLSESLRALGFTLGRFKTGTPARLARASIDWAVLEPQPGDTVVRPFSWRTKREGEGGMPFPRQPEVMCALTATTARTHEVLRDNLHRSPLYQGDIVGRGPRYCPSLEDKVVRFAARERHQVFLEPEGPTSPLVYPAGLSTSLPADVQLTFLRTIPGLEQVEVVRFGYAVEYDYAPPTQLKSTLETKAITGLYFAGQLNGTSGYEEAAFQGLWAGINAALQVKGEPPLQPGRDEAHGAVLVDDLVTKGVDEPFRMFTSRSEHRLKLREGNADLRLARHGHRVGLLPREALERAEARGRAVTEEVARLKRTGLAAKLRRPEVTYAQLSEAQEAWPRLPPDVAEEVEVEVKYEGYIAQAERAAAREAESTDRWRIPEGYRFSEVRGLGAEAVEKLTAHQPGTVGQARRIPGVTPAAVSLLLVALKRGTGAPEVCSQPEK
>NZ_CP012109.1|WP_002640363.1|8665311_8666568_-|multidrug-effflux-MFS-transporter
MTTSSNTPSARGTLGLELLLGTLTAFAPLSIDMYLPALPRIAEDLGSSAPVVQLTLASCFAGLALGQLFTGPLIDRFGRTRPLYAGLALYVLGSLGCALVPTAEALVAMRFVQALGGSVALVVPRAVVRDLWSGADAARTMSRLMLVMGVAPILAPLLGGFVLQYSGWRAIFLVLAAVGAVALAFVLKTLPETAPPHSGSQTVLSRLGAIVKDPDFVGPALAGGFAQAGMFAYIAGSPFVFISLYGVPEAHFGWFFGANAMGLIAVAQLNRKLVTHLPLHRVLRLALSLCVITAVGVVAVAWTGFMGLWGIAVTLFLFVSAMGLVGPNAAAIALERHATRAGIASAALGALQFTAAAGASWAVSTFNNGTAMPMAGVMAAMAMLAWLAAFFGLRLRTRQQGAGEASGMASGQGSARAG
>NZ_CP012109.1|WP_021781320.1|8664443_8665223_-|alpha/beta-hydrolase
MTSNSRTVQGPAGRLAVTETGSGGLPVVFVHSNAGRREQWAAQQAHLKQRSVSLDLRGVGESDLDDQGRYGAEAVAEDVQAVADALGLERFVLVGHSFGGNVVGEYARRWPERLAGLVIVDAAGTMPPLPPEQLEGFHQGTRPESYRAFMDAWYTPPLQNAKPHTHESVMRWLHTTPREVVVGALESMLTYDSDRVLAHYKGPFQTLVVDAFIQPNAYHLMYPGTPHTVFSGVSHWLMMDDPERFNAALDAFLATLPQR
>NZ_CP012109.1|WP_144429669.1|8663525_8664257_-|hypothetical-protein
MRQLRRTCLASVIVFAATGCTTTLYKPNQVSAPLLREKGEVKGTLGNNNLQVAWSPTEGVGLLAQGYYERYAEGERRATGALGEVGGGFYGTFLDNAVWETYGGLGYGQSTASDRLDLNSATPRDVGFTARAVRAFIQPNLGYVTPYFEVAGSVRLSAVKYVSLNANGYTDAERTQEFLVARDVTRPVWLFAEPALTVKGGYKWVKLYAQRAWSFKLGGEALPHERDSTVVGISVDVASWYND
>NZ_CP012109.1|WP_002637852.1|8660574_8663445_+|insulinase-family-protein
MHSKTTREDRMKRRTPLSLVAALMMVAGTPVWAQTPSPAPKAAQATASKAAAPQSKAKGRAPAAVNSVEGITEYRLPNGMKVLLFPDPTKPTVTVNVTYFVGSKHEGYGETGMAHLLEHLMFKGTPTTRNVPQALTERGARPNGTTWLDRTNYYETLPASDANLRWALSFEADRMVNSFIAKKDLDSEMTVVRNEFESGENDPRGILFERVMSAAYIWHSYGKATIGARSDLENVPIDRLQAFYRKYYRPDNAMLVVAGRFDEAKALSMIQDTFGKLKKPAQPLPATYTAEPTQDGEREVQLRRVGDTALLTSLYHVPEGAHEDFAAIDVLTLAMGNNPSGRLFKAMVETKKAARVGASNLQLRDPGVLVFNAEMREDQPTAAARETLLKTVEEASRTPFTAEEVDRAKATLSKYIDLTINNSERVAIMLSEWEATGDWRLLFLHRDRIEAVKPEDVTRVAAEYLKPSNRTLGTFIPTPKPDRAELPAPVNVATMMEGYKGRAAVAQGEAFDPSPANIESRVQRGELPGGVQYALLPKKTRGNMVNVSLTLRWGTEAALRGQADAASYAGRMLMRGTKHRTRQQLQDAFDKLKARVGVDGSSTGASASIECPRESLPEVLKLVTEVLREPAYDEKEFAMLKQERLAALESERSEPQTLGNIAFWRAVSGHYTKGHPYYVATLDERIAGVRDTTLEQARAFHKSFYGASNGELAVVGDFEPKDVVPVVSELLGKWKSPAPYQRVPQVFSDGKPTSVALETPDKANAYYMAGQALKLRKDDADWPALTLGNFVLGGGFLNSRLATRIRQQDGLSYGVASSLDASDVDEVGSFFTYAIYAPENAARLETAMREEVTRAVQKGYSAEELQKARSGMLEYRQSARAQDGTLARQLASYLFLGRTLAFDAEFEKKLAQLKPEDVRKAMERHFNWDKVTQVRAGDFATAQKKASGAAKAPAAP
>NZ_CP012109.1|WP_002637851.1|8659476_8660454_+|aldo/keto-reductase
MQTRRLGNSGMDITRLGFGAWAIGGGGWQFAWGPQDDAQSIQAIRHAVERGIGWIDTAAVYGLGHSEELVAQALEGMSQRPYVFTKCGMVWDARGRITRSLKADSIRRECEASLRRLKVDAIDLYQIHWPVESQAECEEGWSTMAALQREGKVRWIGVSNFDARQLERIHAIAPVTSLQPRYSLIHRDIESSTLPFCERNGIGVIAYSPMASGLLTGKMTRERVGAFPQDDWRRHSADFQEPGLTRNLVLAELLREVGRRLGRSPAEVALAWVLRHSSITGAIVGARSAEQVDGFVGAGDLRLSPDTLRDIEAHLQGASRGDAHA
>NZ_CP012109.1|WP_002637850.1|8657363_8659154_-|signal-peptide-peptidase-SppA
MKRFFIGALAFVGALSVLFVVGLVGLMVLASASKPSVPSNLVLELDLENPLPENSAGDSLAGAFGEEPATVRDVVDALEKAGSDARVKALVVRIGQTGTPAATQEIRDAVKAFRAKGKKTVAYSDTFGELGNSTLSYYLASAFDEIYIQPSGDLNITGLAFELPFARDAFAKLGVTPQYSARYEYKNAVNSFTEQDFTAPHREATERFTQSLFEQMVRGIAEERGLTEDVVRGLIDKAPLMASEALEGKLVTGLRYRDEVMGELKAQAGDGARFLYVEKYLERAGRPHVVGDTIALVYGVGEVARGKNRSNPLSGGQGMGAESVAAALRKATEDSRVKAIILRVDSPGGSYVASDTIRREVQRAKEAGKPVIATMGGYAASGGYYVAMEADRIVAQPGTLTGSIGVYAGKFVTADLWHKLGVNFDTVSVGKNAEMYGSDAVFTPEQQARLDATLDRIYEDFTTRAAAGRKLPLEKLQSLAKGRVWTGEDALANGLVDALGGYPKALELAKEAAKLPADARVNVQVYPRKKPASAVLSELLGQRGENSEDDAVTVSALSPWGGLVAGLRQVYAVGAKLGLVEGHRGELYAPMPEASW
>NZ_CP012109.1|WP_044890241.1|8656703_8657297_+|cysteine-dioxygenase-family-protein
MRAMCLGEWVELLREKAGGMPGLVGVGEGLAGLVLKPSSLQPYLHFRRGRYTRNLVYRDAQLEVLLNCWDAGAVSPIHDHDGQECWFSVQSGAFLLENYPLESGGLSPGPARLGAPTAVGPVGAGHVDFRCPEAPIHRVTATQGPAVSLHVYAGPVDRCLVFDPRRQRCVSRELRYHSVFGRPLAPLEGTTQPPALF
>NZ_CP012109.1|WP_002640372.1|8679481_8680273_+|ParA-family-protein
MGRIICISNQKGGVGKTTTAINLAASLASAERRTLLVDMDPQGNAGSGLGIKQDNITGTIYEALLNDRPIKELLHPTELRYLQVVPATPDLTGAEVELVNQDNREFRLRDALRPLASEYDYIIIDCPPSLGLLTLNALAAADSVLIPLQCEYYALEGLSQLTHTIDLVKQGLNPDLKMEGILLTMFDSRANIAHQVVEEVRGYFKKQVFEVIVPRNVRLSECPSFGKPIILYDIKSKGCESYLALGRELMKRDTPKSPRRRVA
>NZ_CP012109.1|WP_002640373.1|8680334_8681228_+|ParB/RepB/Spo0J-family-partition-protein
MVKADAQKRALGRGLSALIPQAGAGGSGKGGEQAAKAGVLKLPIESIHRDKEQPRTYFDEEKLKELSDSIKAQGVLQPILVRKDGDGYRIIAGERRWRASQAAGLKEVPAIVRDVTEVQAFELALVENLQRADLNPIEEAEGYKRLVEEFKLTQEQVSVRVGKERSTVANALRLLALPADVKGMVADGTLSMGHARALLGVPRLPELQNLAKQVAEKKLSVRDTERLVQQSRPNGKKDAGKAAPKQSPQVKSLVEELQRRLGTKVRLTERSPGKGTIEVDFFSYDDLDRLLKLLRKE
>NZ_CP012109.1|WP_044890243.1|8681231_8681684_+|bactofilin-BacM
MALLGGKKDEASSKPLFRREEESVSQRSGEVHTLLGKGSEFEGKLTFEGQVRIDGKFQGQIITKDVLVIGDGAKVQAEIQAGTVIINGQVEGNVKATQIIELKTPGRVKGNLETPSLSMDRGVIFEGSLKMENLGTTGARPPPPPGSEKK
>NZ_CP012109.1|WP_044890244.1|8681686_8682232_+|hypothetical-protein
MQHRKHMAPAALLALTLLGGCKGCNPDGAASGSGEGKDRASSLRSGVKVPLPDGWSAQVAPDESFQAGPPGRPVLRVDLKRGDGEQMPSADTLADRVRDELKDFELSFDQEESSDRYALVRITLAPRLEDGGVGQEAPGFFGARRVDGDLFLCASLPGASPEEVRLATEACRAISVQGSLP
>NZ_CP012109.1|WP_002640376.1|8682504_8682696_+|hypothetical-protein
MSFSGMLPLQLATVDIAPVGEQLIAVGGLVVAGLGALWAAWTRPSPQPVPVPVRSGPRRNPRR
>NZ_CP012109.1|WP_002640377.1|8682809_8683835_-|L-histidine-N(alpha)-methyltransferase
MRVTTVPTVATPGDNAQQTPGVQVDVYVKPGDAKRALREEALQGLCGTPKELSPKWLYDERGSQLFDDITRLPEYYPTRREREILLAHAGDIARLSGADTLIELGSGTSEKTRLLLDALEEAGRLARFVPFDVSEAFLRRAATGLAREYPGITVHAVVGDFERHLGQLPGGGRRLVAFLGGTIGNLKPAQRALFLRQLSAGLQPGDGLLLGTDLIKDRERLYAAYNDSAGVTAEFNRNVLKVLNRELGADFDVEAFDHFAPFDEKNAWVEMRLVSRKAQTVRLSHLHKQVDFAEGEVLRTEVSCKFHQQQVAAELSEAGLELSQWWTDAAGDFALSLSFKR
>NZ_CP012109.1|WP_002640379.1|8685379_8685580_-|hypothetical-protein
MTAETFHALQQVLERLGDPALREPPSDEGLVARHLVPQHGLELEYAWDERSRTLTLLGLARVPLSP
>NZ_CP012109.1|WP_002640380.1|8686120_8686642_+|hypothetical-protein
MARRRYTPWSATNGLLFGMAAGVVLALAEVVLAVATGDSPMRPVRMSAGVLLGPPAFTQQVSDGTALLLGVGVHLVASAVVGLFYSVLDAFLPPDGRGRWEFQSAVGMLYGIFVWLVNFQFIGRGSYPWFLDVPQFPQIVMHAVFLGLPLASLFTAAERRRLLLDAAESTPAG
>NZ_CP012109.1|WP_002640381.1|8686761_8687142_+|helix-turn-helix-domain-containing-protein
MDTELASMLGAASRAARVRMGLTQADVAERIGMASEVYGRLERGHMLPSVQNLRRLCMVLNVPPHELLGLGEGFTAPPPVKEKAAAKNREDDTPEMRRLMRNLRKLSAVQLKLMNLVASAMQHKKK
>NZ_CP012109.1|WP_002640382.1|8687168_8690027_-|terpene-cyclase/mutase-family-protein
MPSHVAFLHPPRSTLALSTFVLVSLTGLLLSNTARAATNAESAQRAINFLSADAENWSARFGCTSCHRHGAAMFGLTNARTKGYDLDALTYNGRTNRQNLDAIMARVVSEQRADGSWYHEDIHYPNAKSSYSAFGLAGYDAHLGTRYSDVLVLAADWSLTRQDANGRWREDFPFYPVGYGNVGITARMMTAVAQAQQRVDPAKAARYQAALDRAATYVRAHMNDLTDGPDEDGQRYTHQVAWAMVGLKAAGPGAGGENTQALASLATRLLSTRAGGGAPGWGSLEGDAPDEFATGISLYALCLAGETPGEHARMADALEWLKARQAPDGSWGASTRYPDIPTTFASLGLACFGDYSVGVTVSGGTRQPFEHDLPRVQSVTYPVTVRNHGYRTDSYRLSTQGGLTGWTATLNRTTLELGPGAEANLLLTITAPEGLEPSLTSDVMVVAASVEAAGVRGSVRVTTYTNPPPPTEGVPTTTTILSPANGELTVALSNTLSARVEDARGWEARGPGMGVVTFSVAGVTVGADNDADGDGVYSIVWRPRASTWSELGAQDLRAVYSGVTLAPARENRLGSTASFAVTVHPSPFPAPSVTLCGLPDFTDALTLEVCGFVTPLAPGAEIDSATFVIQGVSHPVAPDPSGGFVDTVLPLVDGPNVIRLVATDSFGGIASEEATVMVDNTAPSVTFLSPTNGQAMTTYSVDVRMVVRDWSPVRVETNWVQVTDVPAGGGDVTHRVDLWPGENLILVRATDSVGHVTEHMLMVWVDAETPWVSTGLPDGWLVGPQPGDTLPYDIGVYSASSTTVTLSTGRTYALPRGGGGVQATLDLVPGDNTFTIDVTSETGMRTTLSRTVRYDNSAPEAELLLPVPGQTYSGVIQLTARVTDTLSGVRGVAFTRDGSGIRAAALQPDGTWTAELDTRELVDGEHTVEVWMDDHAGNFVIQTFPFFTRNTP

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Crispr_ID: NZ_CP012109_26

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_26

8773131-8773248

Orphan

Consensus_repeat	Method
GCGGGACTCGGATGGGGACGGCGTGCCGGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_26

>merge|NZ_CP012109|26|8773131-8773248|CRISPRCasFinder
GCGGGACTCGGATGGGGACGGCGTGCCGGACGAGGAGGACGCGTGTCCCAATGAGGAAGGGCCCGTCTCGCTGCGCGGCTGTCCGGAGCGGGACTCGGATGGTGACGGCGTGCCGGAC

>NZ_CP012109|26|20|8773131-8773248|CRISPRCasFinder
GCGGGACTCGGATGGGGACGGCGTGCCGGAC	GAGGAGGACGCGTGTCCCAATGAGGAAGGGCCCGTCTCGCTGCGCGGCTGTCCGGA
GCGGGACTCGGATGGTGACGGCGTGCCGGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_044890290.1\|8777376_8777964_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225114
NZ_CP012109.1\|WP_193409817.1\|8779772_8780438_-\|SCO-family-protein	unknown	unknown	gnl\|CDD\|239266
NZ_CP012109.1\|WP_044890286.1\|8765326_8766268_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002638164.1\|8766563_8768288_+\|DUF2326-domain-containing-protein	unknown	unknown	gnl\|CDD\|227612
NZ_CP012109.1\|WP_044890288.1\|8768362_8769484_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044890304.1\|8782366_8783698_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044890287.1\|8766264_8766567_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002638156.1\|8778012_8778429_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237855
NZ_CP012109.1\|WP_044890285.1\|8761095_8761974_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP012109.1\|WP_021781331.1\|8775257_8775674_+\|type-II-secretion-system-protein-GspG	unknown	unknown	gnl\|CDD\|130771
NZ_CP012109.1\|WP_002638167.1\|8762871_8763363_+\|hemerythrin-domain-containing-protein	unknown	unknown	gnl\|CDD\|376622
NZ_CP012109.1\|WP_002638155.1\|8778607_8779075_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002638154.1\|8779224_8779656_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002638168.1\|8761966_8762689_-\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|153249
NZ_CP012109.1\|WP_002638152.1\|8780680_8781805_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|225720
NZ_CP012109.1\|WP_044890289.1\|8769576_8772648_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP012109.1\|WP_082282886.1\|8764234_8765116_+\|tryptophan-2,3-dioxygenase	unknown	unknown	gnl\|CDD\|188272
NZ_CP012109.1\|WP_002638160.1\|8773742_8775203_+\|response-regulator	unknown	unknown	gnl\|CDD\|143636
NZ_CP012109.1\|WP_002638158.1\|8775849_8777211_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP012109.1\|WP_002638166.1\|8763562_8764105_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_193409817.1\|8779772_8780438_-\|SCO-family-protein	gnl\|CDD\|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	1.71593e-40
NZ_CP012109.1\|WP_002638152.1\|8780680_8781805_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|225720	COG3179, COG3179, Predicted chitinase [General function prediction only].	4.46183e-39
NZ_CP012109.1\|WP_002638164.1\|8766563_8768288_+\|DUF2326-domain-containing-protein	gnl\|CDD\|227612	COG5293, COG5293, Predicted ATPase [General function prediction only].	1.28661e-78
NZ_CP012109.1\|WP_044890290.1\|8777376_8777964_+\|hypothetical-protein	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	0.00255327
NZ_CP012109.1\|WP_002638156.1\|8778012_8778429_-\|hypothetical-protein	gnl\|CDD\|237855	PRK14900, valS, valyl-tRNA synthetase; Provisional.	0.000189833
NZ_CP012109.1\|WP_044890285.1\|8761095_8761974_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	4.84885e-19
NZ_CP012109.1\|WP_021781331.1\|8775257_8775674_+\|type-II-secretion-system-protein-GspG	gnl\|CDD\|130771	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G. This model represents GspG, protein G of the main terminal branch of the general secretion pathway, also called type II secretion. It transports folded proteins across the bacterial outer membrane and is widely distributed in Gram-negative pathogens. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	3.07062e-09
NZ_CP012109.1\|WP_002638167.1\|8762871_8763363_+\|hemerythrin-domain-containing-protein	gnl\|CDD\|376622	pfam01814, Hemerythrin, Hemerythrin HHE cation binding domain. Iteration of the HHE family found it to be related to Hemerythrin. It also demonstrated that what has been described as a single domain in fact consists of two cation binding domains. Members of this family occur all across nature and are involved in a variety of processes. For instance, in Nereis diversicolor hemerythrin binds Cadmium so as to protect the organism from toxicity. However Hemerythrin is classically described as Oxygen-binding through two attached Fe2+ ions. And the bacterial NorA is a regulator of response to NO, which suggests yet another set-up for its metal ligands. In Staphylococcus aureus the iron-sulfur cluster repair protein ScdA has been noted to be important when the organism switches to living in environments with low oxygen concentrations; perhaps this protein acts as an oxygen store or scavenger.	1.49838e-08
NZ_CP012109.1\|WP_002638168.1\|8761966_8762689_-\|acyltransferase-family-protein	gnl\|CDD\|153249	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.	1.41422e-41
NZ_CP012109.1\|WP_044890289.1\|8769576_8772648_+\|GAF-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.48942e-50
NZ_CP012109.1\|WP_082282886.1\|8764234_8765116_+\|tryptophan-2,3-dioxygenase	gnl\|CDD\|188272	TIGR03036, trp_2_3_diox, tryptophan 2,3-dioxygenase. Members of this family are tryptophan 2,3-dioxygenase, as confirmed by several experimental characterizations, and by conserved operon structure for many of the other members. This enzyme represents the first of a two-step degradation to L-kynurenine, and a three-step pathway (via kynurenine) to anthranilate plus alanine. [Energy metabolism, Amino acids and amines].	6.88157e-144
NZ_CP012109.1\|WP_002638160.1\|8773742_8775203_+\|response-regulator	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	2.27027e-66
NZ_CP012109.1\|WP_002638158.1\|8775849_8777211_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	7.01732e-13

>NZ_CP012109.1|WP_044890289.1|8769576_8772648_+|GAF-domain-containing-protein
MRPCRGEWGMKVPEKNVGAAVDRMSRALERLSTAPPVVAVLEELLCQATTALGASGAFICWWGGSGDWRTLTTAGVDAEAAAVCAQRLMERAPGPGAPRQPSVVEDLSRDALLAPEPEARDRLAAVSLVSQPLFFAAGLGAAGVLGVLFREAWRPEAGDLPRFGLSVKLAALALERERMAETLRQSVMAARMDAEEAEVLRLRRFQAVTEAFGHALTRDEVARVVLEQGLPAVGAVAGLVHLVEPDGTAVLKAALGLTDAQLAPLRVLQGPGRLELESEVWRAPPRVTGDADAAEARRAPTRVTGNVSGEPDTTPAPWRTLFPAGALGMSDAVPLATPLWLETAAAVRATVPGLASLVTPGPLRALVLLPLQVEGQDFGTLCFGFSEPRRFSALERASITGLGRECGQALERARLYARERSARLQAEAAGQRLRLLADASALVSASLDWEETVAGVARLALGHFADGCAVDSYEDGVVRRLAMLYEDPQEAPRGLELLRFAPHEGSPTLLSEVLASGRPWMMVRPSEEPDDDRTEAGQLYAAARELGVGSLILTPLVARQRTLGLLTFMRTASSPPFEIPDLSLAEELAGRAALAIDNAALFRKARAAEEESRRSAARLHVLVQVSQLIAEAGLNLPSVLEVLVRKVSEAMGDACVLQLLSEDRTHLDLVTVHHPNAEARAVLDASLSRGPVRVGEGLSGRVAATGQTLFVPRLHADDLRDERVPEGRLFLQHYGPHSVIFVPLGVRGRVLGTLGVMRDAGGREYSVEERALLESLAARAALAIEDARLYGAATQAVKARDELLSVAGHELKSPLNALQLQIHLLARMARDAMAADGFAERAERAARAGQRLGLLIDDLLDVSRLSAGRLGLKREEMDLSALTRELVHRMSEELALAGNDVRLALEQPVLGEWDRLRLEQVLVNLLSNAAKYGAGRPVTVAVEAVGPLARLSVRDEGIGVAPEEQERIFEQFERSASVQHHFKGLGLGLWITKRIVEAHGGTIRLWSEPGKGSTFTVELPLRV
>NZ_CP012109.1|WP_044890288.1|8768362_8769484_+|hypothetical-protein
MDAAAPVLFEKAYVLCYRTFDIAEEVDLERARRVLTEDSRRLKLSRENSQYLQLPNPPLAYELGRRPLALRDGPVTVDATARLFDHGAASIILRVPVVPGTSLDELTRMADELYDSQALEDLALELVEGVRRTIAPAVQAPHLWEQNESYTVIFAEEIRGHPTADELLKQADLARLLLGESGAVPLSPRESESVLQSRFSYTIHDLVVIDWNSAFVYEPSGSRDIPDLLEIANAQLLEFRYYDERLDAHITRIHEKVQAARHGWATLFRSPYRTLTRQTLSTLVDLNEFIERVDNSLKIIGDFYLAKVYESAVRRMRIPAWQGSVTRKHQLLAQTYGLLKGDVDIDRSHTLEAVIVLLIVLEIFFAFFRVFEH
>NZ_CP012109.1|WP_002638164.1|8766563_8768288_+|DUF2326-domain-containing-protein
MIHRLFSDLPTFKSLHLHSGLNVLLADKSPGATDRQTRNGAGKTSFVDLIHFLLGARSAPRSTFRLDPLKDSSFGMEFDLRGHNIVVRRSGADSARIQLEGVPPSWGVPEEVSNEAWKALLGPAMFGLPPADSGKAAPSFRELMAYFARRQLDGGFTAPTKSSSVQQTGSQQTAVTYLLGLDWSIPQEWQRVREQEASLKELKKASGEGPLSPILGSAATLRTQLALAEERARKLRGAIASFQVHAQYHELEKEASRLTRDLNGLVDDNALDRQRAEELRAAVVAEAPPTPPDLERLYEEIGVHLSSAVLRRFEELQAFHDSVVRNRSSYLKSELAALEHRVEERDRKKGELDQRRSEVMEILRSHGALEHFSKLQTELSRVEAEAETLRLRYSAAEALESSRVTMALERTRLLTRLGEDYREQENVLGRAIVAFEEISRSLYEDAGSLTIKATPNGPSFEIQIHGARSKGIQNMQIFCFDMMLMRLCTERGRGPGFLVHDSHLFDGVDERQVAKALQLGARLSDELGFQYIVTMNSDAVPRDLPPGFSLDRHVLPIRLTDATEDGGLFGIRFA
>NZ_CP012109.1|WP_044890287.1|8766264_8766567_+|hypothetical-protein
MILPTKGIRADRALLSVGADVLRLLDEPKTVSRIWDEVRSAWEMRDGASRLSFDWFVLALDLLYVLGAVEMAQGRLSRRTSRTESKRLNPASSPSEGLGT
>NZ_CP012109.1|WP_044890286.1|8765326_8766268_+|hypothetical-protein
MDPNARAFYESRFEIAFLRKKGEAFQDFFSTIMEMGYPSDFQRVRPWGRLGDRKNDGYLGSKRMLFQVYAPNELASAETVRKIHEDFTEALPYWKAHFSTWVFVHNAENGLGPAVLKKLLELEAANSHLKVLRWGFEQLRAEVFLLPESSLARLFGPAPTAQSMDALGISDLRPILEHIPRLPAPSDADLRPVPADKLQRNLLSEHAADLLKLGMRRASLVGRYFDARPDPTERDAIAQALRVRYEELRRTALSPDQVFAALQEFVHSVRAPTPAQHAAVVTVLAYFFEECDIFERTPQQAESVERAAQKVES
>NZ_CP012109.1|WP_082282886.1|8764234_8765116_+|tryptophan-2,3-dioxygenase
MPGPMNTRDLEPGIITDLAGRTTYGDYLQLDRLLSAQVTRSQPPHHDELLFIIQHQTSELWMKLLIHELGACIRYVQADRLEPSFKIFARVAHIQRMLFEQWSVLETLTPNEYLEFRDTLGSSSGFQSFQYRALEFLLGNKDPNALMPFRHVPSVHGELERLFESPSLYDEFLRHLSRMGHPVPQSHAQRDWRKPYEKSPDVVQVFRRIYEDPEAHWDAYEMCEKLVDTEERFQLWRYRHMMTVMRIIGFKQGTGGSSGVGFLRKALDLRFFPELWDVRTELSPPAPSRHRTP
>NZ_CP012109.1|WP_002638166.1|8763562_8764105_+|hypothetical-protein
MSVDKAFRDMIRNEIEVQLKPLRDVVARLEEGTADLDALRNVAERLAPLAEVVGPLFGAQIPAAAKAGRRGPGRPASAARSTLTAAPAAAAGGKRRGRKPAAAGADGSRACAIIGCGKPSRTKGYCAAHYQKLRMLEKTNRRPSDWKDYADPDSVDDIKLPRGRAASKALAAAAQAGHAG
>NZ_CP012109.1|WP_002638167.1|8762871_8763363_+|hemerythrin-domain-containing-protein
MGSPFDSLIHQHRELEERFERLASGVDSGASRETEELLALLRFHSRLEERCLYPLLAQVAGRERCREQTEDHLTMRELMDELEALPPGHSEWQARLLTLEDLVVAHFQEEENALLPQLMTALDSLALDDLRRDLSATRMELLARPQVSHVAGAPLLDSLHWDG
>NZ_CP012109.1|WP_002638168.1|8761966_8762689_-|acyltransferase-family-protein
MDAPLASLRRAIFRLAEQGAALSALYHRARLLGTEHLPLQGPVLLVGNHGVWGYETPAFFHLIHQSTGRYPLGLAERGFFRIPLIRTVLPWLGGVEGTRENALTALQGGALVVCYPGGARETFKRSQGRYRLCWERALGFARLAAQTGVPVVPFAGLGVDDTFRWPPGEERLCVRLSADDKYRMPLVVGMGPLPWPVRLTFAVGAPLEPPPPDASESRLRAFRDTVAASVRRLLTRSAHA
>NZ_CP012109.1|WP_044890285.1|8761095_8761974_-|alpha/beta-hydrolase
MLEALSPRTGSVASPPLVPDVEDIQKGYAHLHCEQRPVRGTPVRLFTFPEGNTDETRTVVCLPGLGASGRSFAPMEPLATTLRLLLWTPPLRTPATHTPLLWNLALLDHAESGLPGRFALLGSSYGSLLSIAYALAHPERVKALVLVSPVASVHRIRRLALTLSTLVRSPRPLAYLLAPTVARVLGGLSLPAEGRAEIVREARRLSPVELLRRLRDVLAADYLSRLHALQVPTLVIQGGRDLLVPRRAARDVAEHIPGARLELIRSASHLPYMSHPDAFNALAGDFLRRHLD
>NZ_CP012109.1|WP_002638160.1|8773742_8775203_+|response-regulator
MSASSPLFGDLLLKLGIVSPSQVQEALALQALTGQRVGEALISLGYVTREQIQDALGEALGLHHDKSPMQPALGELLVGLKYVTLAQLDEALARQRRDGRKLGEILVELGHCTYKQIYEALGLQNRIAGRQDLARPASDGRRRVVVVDDSPLACAFVQEGLVALGYEVLCFQDPFEALESMGRLQPVIVLSDLEMPSLDGVELCRRLKEGPSHAVPVIILTANDGEAERVRGLRAGADDYVNKSASMDELAARIESVVRRTGETERMRKLFARYTSDAVVEEILKSADAVVLTGEKREVTLLFADIRNFTGLAESLPPEQVVGVLNQVLGRMSDAVLTCGGTLDKFLGDGLMAVFGAPVARPDDALRALQCAKMMMDALTDLRIEAEAEWTANGREGQPLVLELGVGINSGVVVAGNIGSTQRAEYTCIGDAVNVAARLCALAGPGEILVGERTRELVDANETAFEDLPPVRLKGKQQPVPLFRAL
>NZ_CP012109.1|WP_021781331.1|8775257_8775674_+|type-II-secretion-system-protein-GspG
MSASSDGEPPPSRRSPVLWVGFVFALALVAAVLVGALNGSKALHADRIHQDFAVLEEALGRYRADKGTLPEEADLGELLVPEYLTELPLDPWGREYRYTSNGEQVFLATFGKGDDRGGTGEEQDHTNHDGHQVPKRAP
>NZ_CP012109.1|WP_002638158.1|8775849_8777211_+|universal-stress-protein
MAIVCVTNLSPESLAAAHVAAAIAGRLQEPLLLLGVAEGDAFLDDGTGALSLTQQRLEEEAVRLEPLARVVRYRLQAGSNADEVLSDEECRRARWIVVAATGWRTSAWRRATVPERLSRYGCAPVLAVRSDAAMTDWARGRRRLLVLVGVDPGSSTTGAAVSFLRELRRVGPCDVLATYVCSPMDERERLGIHSPVHVELLDPGLQDMEALDPVVERVLQREVREQVGDLLGEGSVEVVLEPGFGRPADHLMHVAHTRGVDLMVVGTHQRSGVKRLWHGSVSAGVLRHAAQSVVCVPPIVQSRRAGHPPRSVLVPVDFSEASARAISQARTLVGPGGRVHLLHVHRRRLEDRGLVDHYGVLPEPPRERDQVLQKLWELVPRDETSQAVRWSVEGVTGEDVTLAICQATEREGVDLVCVGTSLEPSRLRDALEGEVAHELVARCRRPVMVVPSA
>NZ_CP012109.1|WP_044890290.1|8777376_8777964_+|hypothetical-protein
MTPQGYREVELICNRSSLLIHGGTEEERRCWAQEAARNFDVELVEVRQAAELPQALRHPNGVVFIADVARLGREAQFALLRCLQTQEERPKLVLGVSGAADAARARGTLREDLHYRLHQAQVDLQKDGLRDVLKRRWAQQAEQLALKAAAARVAEEQAREAAAARRPGTVTRTAPKPKGMSSAARGKAESRNAVR
>NZ_CP012109.1|WP_002638156.1|8778012_8778429_-|hypothetical-protein
MAISKRGLVDRVKEVAVQAGTRGAKVLLGTAVVTARGVASLQSKLRGEKAERSRARSATAARRTAKAVRGVIESAKPVKAPARKRPSTAKKVAAASTAASRQTGRKAVPAQAAAPKRGTAKKPTARTVKTKRGQKHRH
>NZ_CP012109.1|WP_002638155.1|8778607_8779075_+|hypothetical-protein
MSQDNTAKPKRGLKRPIEVVRAELLKDPETKKIAEAVSMQLEDYVELVLKYAQDKDKEAEVAVISDEELRRNGFNPLSAEEAANILIKGMKGELPGSPPDFEASKFTQDKVSTAGKPVLNTPDGTAPAPTGPQDPAARQELMDQLKKGSSGGNRP
>NZ_CP012109.1|WP_002638154.1|8779224_8779656_+|hypothetical-protein
MGSAIQGITKAIGKVAGTVSKIAGGIANIGGKAMEFLQKPLSSLVDPIAKFIGDKVGKLPLVGKFLGPTAENLVKQGASSFLGEGTLGSMGFLSKIAGKVGDITNIAQSIKTGADKVGAFANNPLGQQNFQNIIAQGHARFVE
>NZ_CP012109.1|WP_193409817.1|8779772_8780438_-|SCO-family-protein
MSADSALPAPRARLTQRPGFWAGVAVTALGITAVSGLTLLRGRGASQPLPDLGALPDFTFTRHDGQPFGSGQLRGKPFVANFIFTRCPTVCPEFTRKMVGVQKETAAFGAGLQLVSFSVDPKYDTPERLTEYGERHGADFSRWSFLTGDYEQLKETIVQGFKVSMGREPGAPEDDLLSIFHGTHFVLVDDAGQIRGYYDSADSDSTQRLLRDTQRLAKTGH
>NZ_CP012109.1|WP_002638152.1|8780680_8781805_+|LysM-peptidoglycan-binding-domain-containing-protein
MTTYSVRSGDTLGALAKRFNTSVSSLAKTNGISNPNLIFTGQKLRVPDGFDAPRASGGGRAASSYTVKSGDTLSGIAGRHGTTVSALAKANNISNPNRIYAGQKLTIPGSGGAAPTKPSSGGGGGGSYTVKSGDTLSGIASRHGTTVSALARANNISNPNLIHVGQRLTIPGGGGASPTRPTPSQPPVGGVGGPKPPTGGSAGVTVGQLRAVMPNLSQAKAEQYLPYLNQAMAEANITTPMRKAAFLAQLAHESGQLRYMEEIASGAAYEGRRDLGNTQPGDGVRYKGRGPIQLTGRANYRAAGRALGIDLEGNPQRAKDPDVAFRIAGWYWSSRNLNTYADAGNFREVTRRINGGYNGLADREMYYRRAQNVF
>NZ_CP012109.1|WP_044890304.1|8782366_8783698_+|hypothetical-protein
MHAFAGPSSRAAAPPTRSPPPESAGPAVSAGELTALGGRLRPPGSKHLPEEVFQGIRTHLTRSLTDWTVSAADVRAVHGALGALPPGPYRAALERMERDGLLRTYVNAQDAGSRRAFLEQAEGKGMLQRNKGETSPVDALGYPAVPDFFVNDARLPRAMRDAVNAHAIDVGVGFYKAHGEYLVRYALAVDQAGSRRELGALGPPRAAQLSESVLGLEWKDPARKDYEAAWKAGIGRPKSLNLTYQHLTARERELSGERGAGTVRLQGKVGAGSETAQWALKGSLDTRGQRELKGEAGVTVRSGPMKLELSQDTAGKKEATVKLDLGLVEFSLDSGGAQRVAVGIGKALQVQATLNPRKAEFEGGLSAKVKADGDQAGVEVGFSMKGLSAQRARQAVDRGHRGVFQQPAELESRMAWDTLPPATRAAYAKEGWSRELWTQALPR

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Crispr_ID: NZ_CP012109_25

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_25

8772783-8772988

Orphan

Consensus_repeat	Method
GCGGGACTCGGATGGGGACGGCGTGCCGGAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP012109_25

>merge|NZ_CP012109|25|8772783-8772988|CRISPRCasFinder
ACTGGACGCGGATGGCGACGGTGTCCCCAATGGCGAGGACGCCTGTCCCACCGTGCGCGGGCTGGCGCGGCTCCAGGGCTGCCCGGTGCGGGACACGGACGGGGACGGGGTGGAGGACTCGCTCGACAAGTGCCCGCGTCACGCCGGGCCCGCTTCCCGGGACGGCTGCCCCATCCGCGACACGGACGAGGACGGCGTGGAGGACG

>NZ_CP012109|25|19|8772783-8772988|CRISPRCasFinder
ACTGGACGCGGATGGCGACGGTGTCCCCAAT	GGCGAGGACGCCTGTCCCACCGTGCGCGGGCTGGCGCGGCTCCAGGGCTGCCCGGT
GCGGGACACGGACGGGGACGGGGTGGAGGAC	TCGCTCGACAAGTGCCCGCGTCACGCCGGGCCCGCTTCCCGGGACGGCTGCCCCAT
CCGCGACACGGACGAGGACGGCGTGGAGGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_044890290.1\|8777376_8777964_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225114
NZ_CP012109.1\|WP_193409817.1\|8779772_8780438_-\|SCO-family-protein	unknown	unknown	gnl\|CDD\|239266
NZ_CP012109.1\|WP_044890286.1\|8765326_8766268_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002638164.1\|8766563_8768288_+\|DUF2326-domain-containing-protein	unknown	unknown	gnl\|CDD\|227612
NZ_CP012109.1\|WP_044890288.1\|8768362_8769484_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044890304.1\|8782366_8783698_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044890287.1\|8766264_8766567_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002638156.1\|8778012_8778429_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237855
NZ_CP012109.1\|WP_044890285.1\|8761095_8761974_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP012109.1\|WP_021781331.1\|8775257_8775674_+\|type-II-secretion-system-protein-GspG	unknown	unknown	gnl\|CDD\|130771
NZ_CP012109.1\|WP_002638167.1\|8762871_8763363_+\|hemerythrin-domain-containing-protein	unknown	unknown	gnl\|CDD\|376622
NZ_CP012109.1\|WP_002638155.1\|8778607_8779075_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002638154.1\|8779224_8779656_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002638168.1\|8761966_8762689_-\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|153249
NZ_CP012109.1\|WP_002638152.1\|8780680_8781805_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|225720
NZ_CP012109.1\|WP_044890289.1\|8769576_8772648_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP012109.1\|WP_082282886.1\|8764234_8765116_+\|tryptophan-2,3-dioxygenase	unknown	unknown	gnl\|CDD\|188272
NZ_CP012109.1\|WP_002638160.1\|8773742_8775203_+\|response-regulator	unknown	unknown	gnl\|CDD\|143636
NZ_CP012109.1\|WP_002638158.1\|8775849_8777211_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP012109.1\|WP_002638166.1\|8763562_8764105_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_193409817.1\|8779772_8780438_-\|SCO-family-protein	gnl\|CDD\|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	1.71593e-40
NZ_CP012109.1\|WP_002638152.1\|8780680_8781805_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|225720	COG3179, COG3179, Predicted chitinase [General function prediction only].	4.46183e-39
NZ_CP012109.1\|WP_002638164.1\|8766563_8768288_+\|DUF2326-domain-containing-protein	gnl\|CDD\|227612	COG5293, COG5293, Predicted ATPase [General function prediction only].	1.28661e-78
NZ_CP012109.1\|WP_044890290.1\|8777376_8777964_+\|hypothetical-protein	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	0.00255327
NZ_CP012109.1\|WP_002638156.1\|8778012_8778429_-\|hypothetical-protein	gnl\|CDD\|237855	PRK14900, valS, valyl-tRNA synthetase; Provisional.	0.000189833
NZ_CP012109.1\|WP_044890285.1\|8761095_8761974_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	4.84885e-19
NZ_CP012109.1\|WP_021781331.1\|8775257_8775674_+\|type-II-secretion-system-protein-GspG	gnl\|CDD\|130771	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G. This model represents GspG, protein G of the main terminal branch of the general secretion pathway, also called type II secretion. It transports folded proteins across the bacterial outer membrane and is widely distributed in Gram-negative pathogens. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	3.07062e-09
NZ_CP012109.1\|WP_002638167.1\|8762871_8763363_+\|hemerythrin-domain-containing-protein	gnl\|CDD\|376622	pfam01814, Hemerythrin, Hemerythrin HHE cation binding domain. Iteration of the HHE family found it to be related to Hemerythrin. It also demonstrated that what has been described as a single domain in fact consists of two cation binding domains. Members of this family occur all across nature and are involved in a variety of processes. For instance, in Nereis diversicolor hemerythrin binds Cadmium so as to protect the organism from toxicity. However Hemerythrin is classically described as Oxygen-binding through two attached Fe2+ ions. And the bacterial NorA is a regulator of response to NO, which suggests yet another set-up for its metal ligands. In Staphylococcus aureus the iron-sulfur cluster repair protein ScdA has been noted to be important when the organism switches to living in environments with low oxygen concentrations; perhaps this protein acts as an oxygen store or scavenger.	1.49838e-08
NZ_CP012109.1\|WP_002638168.1\|8761966_8762689_-\|acyltransferase-family-protein	gnl\|CDD\|153249	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.	1.41422e-41
NZ_CP012109.1\|WP_044890289.1\|8769576_8772648_+\|GAF-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.48942e-50
NZ_CP012109.1\|WP_082282886.1\|8764234_8765116_+\|tryptophan-2,3-dioxygenase	gnl\|CDD\|188272	TIGR03036, trp_2_3_diox, tryptophan 2,3-dioxygenase. Members of this family are tryptophan 2,3-dioxygenase, as confirmed by several experimental characterizations, and by conserved operon structure for many of the other members. This enzyme represents the first of a two-step degradation to L-kynurenine, and a three-step pathway (via kynurenine) to anthranilate plus alanine. [Energy metabolism, Amino acids and amines].	6.88157e-144
NZ_CP012109.1\|WP_002638160.1\|8773742_8775203_+\|response-regulator	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	2.27027e-66
NZ_CP012109.1\|WP_002638158.1\|8775849_8777211_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	7.01732e-13

>NZ_CP012109.1|WP_044890289.1|8769576_8772648_+|GAF-domain-containing-protein
MRPCRGEWGMKVPEKNVGAAVDRMSRALERLSTAPPVVAVLEELLCQATTALGASGAFICWWGGSGDWRTLTTAGVDAEAAAVCAQRLMERAPGPGAPRQPSVVEDLSRDALLAPEPEARDRLAAVSLVSQPLFFAAGLGAAGVLGVLFREAWRPEAGDLPRFGLSVKLAALALERERMAETLRQSVMAARMDAEEAEVLRLRRFQAVTEAFGHALTRDEVARVVLEQGLPAVGAVAGLVHLVEPDGTAVLKAALGLTDAQLAPLRVLQGPGRLELESEVWRAPPRVTGDADAAEARRAPTRVTGNVSGEPDTTPAPWRTLFPAGALGMSDAVPLATPLWLETAAAVRATVPGLASLVTPGPLRALVLLPLQVEGQDFGTLCFGFSEPRRFSALERASITGLGRECGQALERARLYARERSARLQAEAAGQRLRLLADASALVSASLDWEETVAGVARLALGHFADGCAVDSYEDGVVRRLAMLYEDPQEAPRGLELLRFAPHEGSPTLLSEVLASGRPWMMVRPSEEPDDDRTEAGQLYAAARELGVGSLILTPLVARQRTLGLLTFMRTASSPPFEIPDLSLAEELAGRAALAIDNAALFRKARAAEEESRRSAARLHVLVQVSQLIAEAGLNLPSVLEVLVRKVSEAMGDACVLQLLSEDRTHLDLVTVHHPNAEARAVLDASLSRGPVRVGEGLSGRVAATGQTLFVPRLHADDLRDERVPEGRLFLQHYGPHSVIFVPLGVRGRVLGTLGVMRDAGGREYSVEERALLESLAARAALAIEDARLYGAATQAVKARDELLSVAGHELKSPLNALQLQIHLLARMARDAMAADGFAERAERAARAGQRLGLLIDDLLDVSRLSAGRLGLKREEMDLSALTRELVHRMSEELALAGNDVRLALEQPVLGEWDRLRLEQVLVNLLSNAAKYGAGRPVTVAVEAVGPLARLSVRDEGIGVAPEEQERIFEQFERSASVQHHFKGLGLGLWITKRIVEAHGGTIRLWSEPGKGSTFTVELPLRV
>NZ_CP012109.1|WP_044890288.1|8768362_8769484_+|hypothetical-protein
MDAAAPVLFEKAYVLCYRTFDIAEEVDLERARRVLTEDSRRLKLSRENSQYLQLPNPPLAYELGRRPLALRDGPVTVDATARLFDHGAASIILRVPVVPGTSLDELTRMADELYDSQALEDLALELVEGVRRTIAPAVQAPHLWEQNESYTVIFAEEIRGHPTADELLKQADLARLLLGESGAVPLSPRESESVLQSRFSYTIHDLVVIDWNSAFVYEPSGSRDIPDLLEIANAQLLEFRYYDERLDAHITRIHEKVQAARHGWATLFRSPYRTLTRQTLSTLVDLNEFIERVDNSLKIIGDFYLAKVYESAVRRMRIPAWQGSVTRKHQLLAQTYGLLKGDVDIDRSHTLEAVIVLLIVLEIFFAFFRVFEH
>NZ_CP012109.1|WP_002638164.1|8766563_8768288_+|DUF2326-domain-containing-protein
MIHRLFSDLPTFKSLHLHSGLNVLLADKSPGATDRQTRNGAGKTSFVDLIHFLLGARSAPRSTFRLDPLKDSSFGMEFDLRGHNIVVRRSGADSARIQLEGVPPSWGVPEEVSNEAWKALLGPAMFGLPPADSGKAAPSFRELMAYFARRQLDGGFTAPTKSSSVQQTGSQQTAVTYLLGLDWSIPQEWQRVREQEASLKELKKASGEGPLSPILGSAATLRTQLALAEERARKLRGAIASFQVHAQYHELEKEASRLTRDLNGLVDDNALDRQRAEELRAAVVAEAPPTPPDLERLYEEIGVHLSSAVLRRFEELQAFHDSVVRNRSSYLKSELAALEHRVEERDRKKGELDQRRSEVMEILRSHGALEHFSKLQTELSRVEAEAETLRLRYSAAEALESSRVTMALERTRLLTRLGEDYREQENVLGRAIVAFEEISRSLYEDAGSLTIKATPNGPSFEIQIHGARSKGIQNMQIFCFDMMLMRLCTERGRGPGFLVHDSHLFDGVDERQVAKALQLGARLSDELGFQYIVTMNSDAVPRDLPPGFSLDRHVLPIRLTDATEDGGLFGIRFA
>NZ_CP012109.1|WP_044890287.1|8766264_8766567_+|hypothetical-protein
MILPTKGIRADRALLSVGADVLRLLDEPKTVSRIWDEVRSAWEMRDGASRLSFDWFVLALDLLYVLGAVEMAQGRLSRRTSRTESKRLNPASSPSEGLGT
>NZ_CP012109.1|WP_044890286.1|8765326_8766268_+|hypothetical-protein
MDPNARAFYESRFEIAFLRKKGEAFQDFFSTIMEMGYPSDFQRVRPWGRLGDRKNDGYLGSKRMLFQVYAPNELASAETVRKIHEDFTEALPYWKAHFSTWVFVHNAENGLGPAVLKKLLELEAANSHLKVLRWGFEQLRAEVFLLPESSLARLFGPAPTAQSMDALGISDLRPILEHIPRLPAPSDADLRPVPADKLQRNLLSEHAADLLKLGMRRASLVGRYFDARPDPTERDAIAQALRVRYEELRRTALSPDQVFAALQEFVHSVRAPTPAQHAAVVTVLAYFFEECDIFERTPQQAESVERAAQKVES
>NZ_CP012109.1|WP_082282886.1|8764234_8765116_+|tryptophan-2,3-dioxygenase
MPGPMNTRDLEPGIITDLAGRTTYGDYLQLDRLLSAQVTRSQPPHHDELLFIIQHQTSELWMKLLIHELGACIRYVQADRLEPSFKIFARVAHIQRMLFEQWSVLETLTPNEYLEFRDTLGSSSGFQSFQYRALEFLLGNKDPNALMPFRHVPSVHGELERLFESPSLYDEFLRHLSRMGHPVPQSHAQRDWRKPYEKSPDVVQVFRRIYEDPEAHWDAYEMCEKLVDTEERFQLWRYRHMMTVMRIIGFKQGTGGSSGVGFLRKALDLRFFPELWDVRTELSPPAPSRHRTP
>NZ_CP012109.1|WP_002638166.1|8763562_8764105_+|hypothetical-protein
MSVDKAFRDMIRNEIEVQLKPLRDVVARLEEGTADLDALRNVAERLAPLAEVVGPLFGAQIPAAAKAGRRGPGRPASAARSTLTAAPAAAAGGKRRGRKPAAAGADGSRACAIIGCGKPSRTKGYCAAHYQKLRMLEKTNRRPSDWKDYADPDSVDDIKLPRGRAASKALAAAAQAGHAG
>NZ_CP012109.1|WP_002638167.1|8762871_8763363_+|hemerythrin-domain-containing-protein
MGSPFDSLIHQHRELEERFERLASGVDSGASRETEELLALLRFHSRLEERCLYPLLAQVAGRERCREQTEDHLTMRELMDELEALPPGHSEWQARLLTLEDLVVAHFQEEENALLPQLMTALDSLALDDLRRDLSATRMELLARPQVSHVAGAPLLDSLHWDG
>NZ_CP012109.1|WP_002638168.1|8761966_8762689_-|acyltransferase-family-protein
MDAPLASLRRAIFRLAEQGAALSALYHRARLLGTEHLPLQGPVLLVGNHGVWGYETPAFFHLIHQSTGRYPLGLAERGFFRIPLIRTVLPWLGGVEGTRENALTALQGGALVVCYPGGARETFKRSQGRYRLCWERALGFARLAAQTGVPVVPFAGLGVDDTFRWPPGEERLCVRLSADDKYRMPLVVGMGPLPWPVRLTFAVGAPLEPPPPDASESRLRAFRDTVAASVRRLLTRSAHA
>NZ_CP012109.1|WP_044890285.1|8761095_8761974_-|alpha/beta-hydrolase
MLEALSPRTGSVASPPLVPDVEDIQKGYAHLHCEQRPVRGTPVRLFTFPEGNTDETRTVVCLPGLGASGRSFAPMEPLATTLRLLLWTPPLRTPATHTPLLWNLALLDHAESGLPGRFALLGSSYGSLLSIAYALAHPERVKALVLVSPVASVHRIRRLALTLSTLVRSPRPLAYLLAPTVARVLGGLSLPAEGRAEIVREARRLSPVELLRRLRDVLAADYLSRLHALQVPTLVIQGGRDLLVPRRAARDVAEHIPGARLELIRSASHLPYMSHPDAFNALAGDFLRRHLD
>NZ_CP012109.1|WP_002638160.1|8773742_8775203_+|response-regulator
MSASSPLFGDLLLKLGIVSPSQVQEALALQALTGQRVGEALISLGYVTREQIQDALGEALGLHHDKSPMQPALGELLVGLKYVTLAQLDEALARQRRDGRKLGEILVELGHCTYKQIYEALGLQNRIAGRQDLARPASDGRRRVVVVDDSPLACAFVQEGLVALGYEVLCFQDPFEALESMGRLQPVIVLSDLEMPSLDGVELCRRLKEGPSHAVPVIILTANDGEAERVRGLRAGADDYVNKSASMDELAARIESVVRRTGETERMRKLFARYTSDAVVEEILKSADAVVLTGEKREVTLLFADIRNFTGLAESLPPEQVVGVLNQVLGRMSDAVLTCGGTLDKFLGDGLMAVFGAPVARPDDALRALQCAKMMMDALTDLRIEAEAEWTANGREGQPLVLELGVGINSGVVVAGNIGSTQRAEYTCIGDAVNVAARLCALAGPGEILVGERTRELVDANETAFEDLPPVRLKGKQQPVPLFRAL
>NZ_CP012109.1|WP_021781331.1|8775257_8775674_+|type-II-secretion-system-protein-GspG
MSASSDGEPPPSRRSPVLWVGFVFALALVAAVLVGALNGSKALHADRIHQDFAVLEEALGRYRADKGTLPEEADLGELLVPEYLTELPLDPWGREYRYTSNGEQVFLATFGKGDDRGGTGEEQDHTNHDGHQVPKRAP
>NZ_CP012109.1|WP_002638158.1|8775849_8777211_+|universal-stress-protein
MAIVCVTNLSPESLAAAHVAAAIAGRLQEPLLLLGVAEGDAFLDDGTGALSLTQQRLEEEAVRLEPLARVVRYRLQAGSNADEVLSDEECRRARWIVVAATGWRTSAWRRATVPERLSRYGCAPVLAVRSDAAMTDWARGRRRLLVLVGVDPGSSTTGAAVSFLRELRRVGPCDVLATYVCSPMDERERLGIHSPVHVELLDPGLQDMEALDPVVERVLQREVREQVGDLLGEGSVEVVLEPGFGRPADHLMHVAHTRGVDLMVVGTHQRSGVKRLWHGSVSAGVLRHAAQSVVCVPPIVQSRRAGHPPRSVLVPVDFSEASARAISQARTLVGPGGRVHLLHVHRRRLEDRGLVDHYGVLPEPPRERDQVLQKLWELVPRDETSQAVRWSVEGVTGEDVTLAICQATEREGVDLVCVGTSLEPSRLRDALEGEVAHELVARCRRPVMVVPSA
>NZ_CP012109.1|WP_044890290.1|8777376_8777964_+|hypothetical-protein
MTPQGYREVELICNRSSLLIHGGTEEERRCWAQEAARNFDVELVEVRQAAELPQALRHPNGVVFIADVARLGREAQFALLRCLQTQEERPKLVLGVSGAADAARARGTLREDLHYRLHQAQVDLQKDGLRDVLKRRWAQQAEQLALKAAAARVAEEQAREAAAARRPGTVTRTAPKPKGMSSAARGKAESRNAVR
>NZ_CP012109.1|WP_002638156.1|8778012_8778429_-|hypothetical-protein
MAISKRGLVDRVKEVAVQAGTRGAKVLLGTAVVTARGVASLQSKLRGEKAERSRARSATAARRTAKAVRGVIESAKPVKAPARKRPSTAKKVAAASTAASRQTGRKAVPAQAAAPKRGTAKKPTARTVKTKRGQKHRH
>NZ_CP012109.1|WP_002638155.1|8778607_8779075_+|hypothetical-protein
MSQDNTAKPKRGLKRPIEVVRAELLKDPETKKIAEAVSMQLEDYVELVLKYAQDKDKEAEVAVISDEELRRNGFNPLSAEEAANILIKGMKGELPGSPPDFEASKFTQDKVSTAGKPVLNTPDGTAPAPTGPQDPAARQELMDQLKKGSSGGNRP
>NZ_CP012109.1|WP_002638154.1|8779224_8779656_+|hypothetical-protein
MGSAIQGITKAIGKVAGTVSKIAGGIANIGGKAMEFLQKPLSSLVDPIAKFIGDKVGKLPLVGKFLGPTAENLVKQGASSFLGEGTLGSMGFLSKIAGKVGDITNIAQSIKTGADKVGAFANNPLGQQNFQNIIAQGHARFVE
>NZ_CP012109.1|WP_193409817.1|8779772_8780438_-|SCO-family-protein
MSADSALPAPRARLTQRPGFWAGVAVTALGITAVSGLTLLRGRGASQPLPDLGALPDFTFTRHDGQPFGSGQLRGKPFVANFIFTRCPTVCPEFTRKMVGVQKETAAFGAGLQLVSFSVDPKYDTPERLTEYGERHGADFSRWSFLTGDYEQLKETIVQGFKVSMGREPGAPEDDLLSIFHGTHFVLVDDAGQIRGYYDSADSDSTQRLLRDTQRLAKTGH
>NZ_CP012109.1|WP_002638152.1|8780680_8781805_+|LysM-peptidoglycan-binding-domain-containing-protein
MTTYSVRSGDTLGALAKRFNTSVSSLAKTNGISNPNLIFTGQKLRVPDGFDAPRASGGGRAASSYTVKSGDTLSGIAGRHGTTVSALAKANNISNPNRIYAGQKLTIPGSGGAAPTKPSSGGGGGGSYTVKSGDTLSGIASRHGTTVSALARANNISNPNLIHVGQRLTIPGGGGASPTRPTPSQPPVGGVGGPKPPTGGSAGVTVGQLRAVMPNLSQAKAEQYLPYLNQAMAEANITTPMRKAAFLAQLAHESGQLRYMEEIASGAAYEGRRDLGNTQPGDGVRYKGRGPIQLTGRANYRAAGRALGIDLEGNPQRAKDPDVAFRIAGWYWSSRNLNTYADAGNFREVTRRINGGYNGLADREMYYRRAQNVF
>NZ_CP012109.1|WP_044890304.1|8782366_8783698_+|hypothetical-protein
MHAFAGPSSRAAAPPTRSPPPESAGPAVSAGELTALGGRLRPPGSKHLPEEVFQGIRTHLTRSLTDWTVSAADVRAVHGALGALPPGPYRAALERMERDGLLRTYVNAQDAGSRRAFLEQAEGKGMLQRNKGETSPVDALGYPAVPDFFVNDARLPRAMRDAVNAHAIDVGVGFYKAHGEYLVRYALAVDQAGSRRELGALGPPRAAQLSESVLGLEWKDPARKDYEAAWKAGIGRPKSLNLTYQHLTARERELSGERGAGTVRLQGKVGAGSETAQWALKGSLDTRGQRELKGEAGVTVRSGPMKLELSQDTAGKKEATVKLDLGLVEFSLDSGGAQRVAVGIGKALQVQATLNPRKAEFEGGLSAKVKADGDQAGVEVGFSMKGLSAQRARQAVDRGHRGVFQQPAELESRMAWDTLPPATRAAYAKEGWSRELWTQALPR

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Crispr_ID: NZ_CP012109_27

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_27

8782203-8782383

Orphan

Consensus_repeat	Method
CGCTCACGGCTCGCAACGAGCTGCACGCCTTCTCCGA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP012109_27

>merge|NZ_CP012109|27|8782203-8782383|PILER-CR
CGCCCACGGCTCGCAACGAGCTGCACGCCTTCTCCGAATCCGCCGCGCCGACGTCGGGTGCCCAGGCGAAGTCGCTCACGGCTCGCAACGAGCTGCACGCCTTCTCCGAATCCGCCGCGCCGACGTCGGAAGCTCCGGCGAAGCCGCTCACGGCTCGCAACGAGCTGCACGCCTTCGCCGG

>NZ_CP012109|27|3|8782203-8782383|PILER-CR
CGCCCACGGCTCGCAACGAGCTGCACGCCTTCTCCGA	ATCCGCCGCGCCGACGTCGGGTGCCCAGGCGAAGT
CGCTCACGGCTCGCAACGAGCTGCACGCCTTCTCCGA	ATCCGCCGCGCCGACGTCGGAAGCTCCGGCGAAGC
CGCTCACGGCTCGCAACGAGCTGCACGCCTTCGCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002638143.1\|8790497_8791442_-\|arsenical-pump-driving-ATPase	unknown	unknown	gnl\|CDD\|349755
NZ_CP012109.1\|WP_002638148.1\|8785613_8786489_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235640
NZ_CP012109.1\|WP_193409817.1\|8779772_8780438_-\|SCO-family-protein	unknown	unknown	gnl\|CDD\|239266
NZ_CP012109.1\|WP_002638152.1\|8780680_8781805_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|225720
NZ_CP012109.1\|WP_002638160.1\|8773742_8775203_+\|response-regulator	unknown	unknown	gnl\|CDD\|143636
NZ_CP012109.1\|WP_002638138.1\|8794423_8795380_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002638149.1\|8784717_8785143_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915
NZ_CP012109.1\|WP_044890290.1\|8777376_8777964_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225114
NZ_CP012109.1\|WP_002638156.1\|8778012_8778429_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237855
NZ_CP012109.1\|WP_002638142.1\|8791580_8792801_-\|ornithine--oxo-acid-transaminase	unknown	unknown	gnl\|CDD\|179736
NZ_CP012109.1\|WP_002638147.1\|8786526_8787105_+\|YceI-family-protein	unknown	unknown	gnl\|CDD\|377274
NZ_CP012109.1\|WP_021781331.1\|8775257_8775674_+\|type-II-secretion-system-protein-GspG	unknown	unknown	gnl\|CDD\|130771
NZ_CP012109.1\|WP_002638161.1\|8772690_8773695_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586
NZ_CP012109.1\|WP_002638155.1\|8778607_8779075_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002638146.1\|8787101_8787923_+\|Rieske-2Fe-2S-domain-containing-protein	unknown	unknown	gnl\|CDD\|239550
NZ_CP012109.1\|WP_002638154.1\|8779224_8779656_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_021781332.1\|8787992_8789162_-\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341390
NZ_CP012109.1\|WP_044890292.1\|8789272_8790397_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223082
NZ_CP012109.1\|WP_044890291.1\|8783723_8784569_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368201
NZ_CP012109.1\|WP_002638158.1\|8775849_8777211_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_044890292.1\|8789272_8790397_-\|AAA-family-ATPase	gnl\|CDD\|223082	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning].	1.11935e-28
NZ_CP012109.1\|WP_002638147.1\|8786526_8787105_+\|YceI-family-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	2.33012e-18
NZ_CP012109.1\|WP_193409817.1\|8779772_8780438_-\|SCO-family-protein	gnl\|CDD\|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	1.71593e-40
NZ_CP012109.1\|WP_002638152.1\|8780680_8781805_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|225720	COG3179, COG3179, Predicted chitinase [General function prediction only].	4.46183e-39
NZ_CP012109.1\|WP_002638148.1\|8785613_8786489_+\|hypothetical-protein	gnl\|CDD\|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	0.00170965
NZ_CP012109.1\|WP_002638149.1\|8784717_8785143_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	2.22065e-12
NZ_CP012109.1\|WP_044890290.1\|8777376_8777964_+\|hypothetical-protein	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	0.00255327
NZ_CP012109.1\|WP_002638156.1\|8778012_8778429_-\|hypothetical-protein	gnl\|CDD\|237855	PRK14900, valS, valyl-tRNA synthetase; Provisional.	0.000189833
NZ_CP012109.1\|WP_002638142.1\|8791580_8792801_-\|ornithine--oxo-acid-transaminase	gnl\|CDD\|179736	PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional.	0
NZ_CP012109.1\|WP_002638143.1\|8790497_8791442_-\|arsenical-pump-driving-ATPase	gnl\|CDD\|349755	cd02035, ArsA, Arsenical pump-driving ATPase ArsA. ArsA ATPase functions as an efflux pump located on the inner membrane of the cell. This ATP-driven oxyanion pump catalyzes the extrusion of arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents. The pump is composed of two subunits, the catalytic ArsA subunit and the membrane subunit ArsB, which are encoded by arsA and arsB genes, respectively. Arsenic efflux in bacteria is catalyzed by either ArsB alone or by ArsAB complex. The ATP-coupled pump, however, is more efficient. ArsA is composed of two homologous halves, A1 and A2, connected by a short linker sequence.	1.22457e-22
NZ_CP012109.1\|WP_002638160.1\|8773742_8775203_+\|response-regulator	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	2.27027e-66
NZ_CP012109.1\|WP_002638161.1\|8772690_8773695_+\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	3.86133e-32
NZ_CP012109.1\|WP_002638146.1\|8787101_8787923_+\|Rieske-2Fe-2S-domain-containing-protein	gnl\|CDD\|239550	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes. The Rieske domain can be divided into two subdomains, with an incomplete six-stranded, antiparallel beta-barrel at one end, and an iron-sulfur cluster binding subdomain at the other. The Rieske iron-sulfur center contains a [2Fe-2S] cluster, which is involved in electron transfer, and is liganded to two histidine and two cysteine residues present in conserved sequences called Rieske motifs. In RO systems, the N-terminal Rieske domain of the alpha subunit acts as an electron shuttle that accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron in the alpha subunit C-terminal domain to be used for catalysis.	7.94133e-14
NZ_CP012109.1\|WP_021781332.1\|8787992_8789162_-\|CBS-domain-containing-protein	gnl\|CDD\|341390	cd04622, CBS_pair_HRP1_like, CBS pair domain found in Hypoxic Response Protein 1 (HRP1) -like proteinds. Mycobacterium tuberculosis adapts to cellular stresses by upregulation of the dormancy survival regulon. Hypoxic response protein 1 (HRP1) is encoded by one of the most strongly upregulated genes in the dormancy survival regulon. HRP1 is a 'CBS-domain-only protein; however unlike other CBS containing proteins it does not appear to bind AMP. The biological function of the protein remains unclear, but is thought to contribute to the modulation of the host immune response. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	2.60257e-46
NZ_CP012109.1\|WP_021781331.1\|8775257_8775674_+\|type-II-secretion-system-protein-GspG	gnl\|CDD\|130771	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G. This model represents GspG, protein G of the main terminal branch of the general secretion pathway, also called type II secretion. It transports folded proteins across the bacterial outer membrane and is widely distributed in Gram-negative pathogens. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	3.07062e-09
NZ_CP012109.1\|WP_044890291.1\|8783723_8784569_-\|hypothetical-protein	gnl\|CDD\|368201	pfam04935, SURF6, Surfeit locus protein 6. The surfeit locus protein SURF-6 is shown to be a component of the nucleolar matrix and has a strong binding capacity for nucleic acids.	0.00142077
NZ_CP012109.1\|WP_002638158.1\|8775849_8777211_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	7.01732e-13

>NZ_CP012109.1|WP_002638152.1|8780680_8781805_+|LysM-peptidoglycan-binding-domain-containing-protein
MTTYSVRSGDTLGALAKRFNTSVSSLAKTNGISNPNLIFTGQKLRVPDGFDAPRASGGGRAASSYTVKSGDTLSGIAGRHGTTVSALAKANNISNPNRIYAGQKLTIPGSGGAAPTKPSSGGGGGGSYTVKSGDTLSGIASRHGTTVSALARANNISNPNLIHVGQRLTIPGGGGASPTRPTPSQPPVGGVGGPKPPTGGSAGVTVGQLRAVMPNLSQAKAEQYLPYLNQAMAEANITTPMRKAAFLAQLAHESGQLRYMEEIASGAAYEGRRDLGNTQPGDGVRYKGRGPIQLTGRANYRAAGRALGIDLEGNPQRAKDPDVAFRIAGWYWSSRNLNTYADAGNFREVTRRINGGYNGLADREMYYRRAQNVF
>NZ_CP012109.1|WP_193409817.1|8779772_8780438_-|SCO-family-protein
MSADSALPAPRARLTQRPGFWAGVAVTALGITAVSGLTLLRGRGASQPLPDLGALPDFTFTRHDGQPFGSGQLRGKPFVANFIFTRCPTVCPEFTRKMVGVQKETAAFGAGLQLVSFSVDPKYDTPERLTEYGERHGADFSRWSFLTGDYEQLKETIVQGFKVSMGREPGAPEDDLLSIFHGTHFVLVDDAGQIRGYYDSADSDSTQRLLRDTQRLAKTGH
>NZ_CP012109.1|WP_002638154.1|8779224_8779656_+|hypothetical-protein
MGSAIQGITKAIGKVAGTVSKIAGGIANIGGKAMEFLQKPLSSLVDPIAKFIGDKVGKLPLVGKFLGPTAENLVKQGASSFLGEGTLGSMGFLSKIAGKVGDITNIAQSIKTGADKVGAFANNPLGQQNFQNIIAQGHARFVE
>NZ_CP012109.1|WP_002638155.1|8778607_8779075_+|hypothetical-protein
MSQDNTAKPKRGLKRPIEVVRAELLKDPETKKIAEAVSMQLEDYVELVLKYAQDKDKEAEVAVISDEELRRNGFNPLSAEEAANILIKGMKGELPGSPPDFEASKFTQDKVSTAGKPVLNTPDGTAPAPTGPQDPAARQELMDQLKKGSSGGNRP
>NZ_CP012109.1|WP_002638156.1|8778012_8778429_-|hypothetical-protein
MAISKRGLVDRVKEVAVQAGTRGAKVLLGTAVVTARGVASLQSKLRGEKAERSRARSATAARRTAKAVRGVIESAKPVKAPARKRPSTAKKVAAASTAASRQTGRKAVPAQAAAPKRGTAKKPTARTVKTKRGQKHRH
>NZ_CP012109.1|WP_044890290.1|8777376_8777964_+|hypothetical-protein
MTPQGYREVELICNRSSLLIHGGTEEERRCWAQEAARNFDVELVEVRQAAELPQALRHPNGVVFIADVARLGREAQFALLRCLQTQEERPKLVLGVSGAADAARARGTLREDLHYRLHQAQVDLQKDGLRDVLKRRWAQQAEQLALKAAAARVAEEQAREAAAARRPGTVTRTAPKPKGMSSAARGKAESRNAVR
>NZ_CP012109.1|WP_002638158.1|8775849_8777211_+|universal-stress-protein
MAIVCVTNLSPESLAAAHVAAAIAGRLQEPLLLLGVAEGDAFLDDGTGALSLTQQRLEEEAVRLEPLARVVRYRLQAGSNADEVLSDEECRRARWIVVAATGWRTSAWRRATVPERLSRYGCAPVLAVRSDAAMTDWARGRRRLLVLVGVDPGSSTTGAAVSFLRELRRVGPCDVLATYVCSPMDERERLGIHSPVHVELLDPGLQDMEALDPVVERVLQREVREQVGDLLGEGSVEVVLEPGFGRPADHLMHVAHTRGVDLMVVGTHQRSGVKRLWHGSVSAGVLRHAAQSVVCVPPIVQSRRAGHPPRSVLVPVDFSEASARAISQARTLVGPGGRVHLLHVHRRRLEDRGLVDHYGVLPEPPRERDQVLQKLWELVPRDETSQAVRWSVEGVTGEDVTLAICQATEREGVDLVCVGTSLEPSRLRDALEGEVAHELVARCRRPVMVVPSA
>NZ_CP012109.1|WP_021781331.1|8775257_8775674_+|type-II-secretion-system-protein-GspG
MSASSDGEPPPSRRSPVLWVGFVFALALVAAVLVGALNGSKALHADRIHQDFAVLEEALGRYRADKGTLPEEADLGELLVPEYLTELPLDPWGREYRYTSNGEQVFLATFGKGDDRGGTGEEQDHTNHDGHQVPKRAP
>NZ_CP012109.1|WP_002638160.1|8773742_8775203_+|response-regulator
MSASSPLFGDLLLKLGIVSPSQVQEALALQALTGQRVGEALISLGYVTREQIQDALGEALGLHHDKSPMQPALGELLVGLKYVTLAQLDEALARQRRDGRKLGEILVELGHCTYKQIYEALGLQNRIAGRQDLARPASDGRRRVVVVDDSPLACAFVQEGLVALGYEVLCFQDPFEALESMGRLQPVIVLSDLEMPSLDGVELCRRLKEGPSHAVPVIILTANDGEAERVRGLRAGADDYVNKSASMDELAARIESVVRRTGETERMRKLFARYTSDAVVEEILKSADAVVLTGEKREVTLLFADIRNFTGLAESLPPEQVVGVLNQVLGRMSDAVLTCGGTLDKFLGDGLMAVFGAPVARPDDALRALQCAKMMMDALTDLRIEAEAEWTANGREGQPLVLELGVGINSGVVVAGNIGSTQRAEYTCIGDAVNVAARLCALAGPGEILVGERTRELVDANETAFEDLPPVRLKGKQQPVPLFRAL
>NZ_CP012109.1|WP_002638161.1|8772690_8773695_+|OmpA-family-protein
MMRALLPWALLAVVSGGLVSGCRHGPELNPALDADGDGVPNGEDACPTVRGLARLQGCPVRDTDGDGVEDSLDKCPRHAGPASRDGCPIRDTDEDGVEDAKDLCPRVPGLLERQGCPIDDPDRDGVEGAADKCPDEPGPASRDGCPVRDSDGDGVPDEEDACPNEEGPVSLRGCPERDSDGDGVPDHRDNCPRERGAMDNQGCISASKQLVIIRPDRLELLERIGFAPGTATLLPRALPVLDNVALVLLAHPRLGVIAIEGHTDNRGDPDAQRAMTLARAEAVRDHLVRQGVPPDRLEAWGIGPDKPLGTNETSHGREANRRMDLRIVAPRARP
>NZ_CP012109.1|WP_044890291.1|8783723_8784569_-|hypothetical-protein
MTATHVRPPPVAEDSPVESLAPLSAPRSLTELRADMCSPGVIPAEVDTLFVEMARPVEGEAALRERADFLQSLMTLPGVGSQQTGSDGITVSTAAVETLLELGYPYALEVPPNLLERAREERDAQRRRKKKQQKEQQQKEQGAEPLPVAGIVVTLFGTALQLLPMLLPLLRTGSRLDVPGFIVMILLLGICVPPAMALMGALMRHRTLQGLGAVGLVLQGLAWLAITLFMSSMSSYGLLLLAWPTWYALLGAAQLIRPSKLPETPPAVEPTKPQAPEAATS
>NZ_CP012109.1|WP_002638149.1|8784717_8785143_+|nuclear-transport-factor-2-family-protein
MAMERAQRFVDALAKLEERGDLEPLIALFSDDAQVSNVASAKVFSGKEGARRFWHEYKGTLQQVKSTFRNMIEAGARVALEWETQGTAHNGAAVAYEGVSILEWDGDRIRRFYAYFDPHALGLELTHGSAPRTEVPATTPA
>NZ_CP012109.1|WP_002638148.1|8785613_8786489_+|hypothetical-protein
MTRFAAFFVVLSLIAAPHTAWAQQSQRDSAKKSRVVKSSSKSKSKATKSNAAKTSSKRKSAKKPPSSRTKAAPAVDSRTVDAPEVQPAQPTMQVEPARPLSAEDDTPTVKKSGEPSVGDVDSMDFDLLEPAEAAAAAQVDPDLERRIGRRRTMLKLHQGLGFAMAAGLVGTTVVGQLQFNDSFRGGGDDRNLLGLHRGLAIGTSALFATVGLLGVLAPEPFEKEKLQWDTITVHKMFMALATVGMVAQIILGVMATDRFGRLSETDMATAHQISGYVTLGAVSAGVFTLFF
>NZ_CP012109.1|WP_002638147.1|8786526_8787105_+|YceI-family-protein
MIARRIALIATLVLALPAVAQSQARTYSVKKDASSLTYKLKHKLHEVVGKAAPSDGKARLLPDGTLQVAVRANVKDFDSGNANRDAHMLETTDAAKFPIIDFKGVATGVKPPTSFPAKVPVKVKGQLTFHGVKKTVEIPMTVLFNSEKEAVAEGSFDISLDAYNVDRPSLLMVKVDDVLVLEPKLVFEVEGT
>NZ_CP012109.1|WP_002638146.1|8787101_8787923_+|Rieske-2Fe-2S-domain-containing-protein
MSSTRRGFLKGILGTGAAGAAASTLPGCAPDIDPAPVTDISASAQGTVDILVSRYPDLEPVGGALTVRVPGTETVPLLVVHSKDDGAPDDFSVLSSICTHVGCPLGYDGKDVICPCHLSRFNARDGAVLQRPATVALQTFSSEYNVNTGVLRINLRAGQSDFPPAVAGEVVLPLSQFPALRDVGGSVTGVPDGYGRRIFVFRMQDGSLSAVDSICTHLNCEVEHRTQEADLFCACHASIFTLDGAVTQGPATRPLKRFTVSETPDSVVLTGVA
>NZ_CP012109.1|WP_021781332.1|8787992_8789162_-|CBS-domain-containing-protein
MAHRSMDDGRDETSGARRAEPTAHREPDVAPPGSRERAESDLTGWNPARDEESSTRQGRYHRAATLRMSQPRTQMDDAPDTIHGAPPENSGPYGRDDRDSRYADGWGPRYDSGEQDVELSPQHAEYRAWDRSGYGGGRDEPFRPQGPHEARAPMRHGDARPRYRTDRGHGDTASSTSASRDRDEASTHRPQRVGMSVYTAVAGRPEETTYRYEGPGTSISTTTGGRPESRASRAGRRWQHEPLSAREVMTRNVRTARRDSPLRDVAQIMKDESCGAVPIVDERGRLVGIVTDRDLVVRAFTGSRSPEQLRVSDVMTDDVEAVTPEDTLQDVIGLMGRRQLRRIPVVERDDCIVGIISLGDIALRADQDEELQHALERISAKRSFWSRLG
>NZ_CP012109.1|WP_044890292.1|8789272_8790397_-|AAA-family-ATPase
MSDGDLRQLLLTKRVIVLCGAGGVGKTTTAAALGVAAARAGRKVLVLTIDPARRLAETMGLQESGTKPTPVPPERLFPHEPPGPGRLDVWMLDPRAVFERMVFRLAPSPDAARAIVEHRLYRFLSELVAGVQEYAAAEALDAFLSEHRYELILLDTPPSRHALDFLDAPGRLARFLDDRIVSLFAPERHARSGRLWHGAQAVVDRVLSGVFGTHFTHELRGFIGAFGGLFAGMRLHTERLRSRLASPDAGFLLVTSPETTSLHEAAWFREALAARGLPFAGYVLNRSWAHDDVLTAPEALLEHAKGDRHAESAVKALSRMATAEQSRSAAHLALLHRLAEHLPPGALAVAAPDTGAELEEFSGLVRLGDALSAG
>NZ_CP012109.1|WP_002638143.1|8790497_8791442_-|arsenical-pump-driving-ATPase
MLEALWEKRVLLVSGKGGVGKTTLAAALAVAAARAGRTVLLAELSPEEDGPSPLAALVGARDVGPRVTRVRPGLNFVRLSAAEGHRHFLEKALPARWLAEAALRTRALRRFLEAGPALREMGLMYQMLTLLRHTRPDGRYAHPLTVVDLPATGHALALAALPQRVLALMPGGPIGRDVREGLDFLQDPVRTAVVLTSLPEPLPVSESLHVASELRRLELPLSVAVLNRMPEDPFTVESRAALNRLLAVHGPHQGAHALARLDRAHAASVRLRRELRAPLLTLPELSVTGPALAEALAETFAPRREDALWQEALP
>NZ_CP012109.1|WP_002638142.1|8791580_8792801_-|ornithine--oxo-acid-transaminase
MSAEHATPHLSTREYIELEERYGAHNYHPLDLVIERGEGVWVHDVEGRKYMDCLSAYSAVNQGHCHPRILETLREQAAKVTLTSRAFRNDQLPHLYKALRDISGLSRALPMNSGAEACETAIKLARKWGHTVKGIPEDRAEVIVFENNFHGRTISLISFSSEPRYRKGFGPFTPGFTVVPYDDVEALRRAITPNTCAVLMEPIQAEAGVLIPKDGYLKQVAALCRENKVLFMVDEIQTGLGRTGKMFAFQHEDVRPDAIVVGKALSGGFYPVSAVMADDEVMGVLQPGEHGSTYGGNPLGCAVARTALDVLRDEKLVERSATLGQAFLARLKTLQSPHIVEVRGRGMMVGIELDIPARPACEALMAEGMLCKETHDFVIRLTPPLVVTQEELDWAFERVKKVIEAL
>NZ_CP012109.1|WP_002638138.1|8794423_8795380_+|hypothetical-protein
MAEPTQTRQPSSSLTEPLLHLGCQSCGARLVLEPALRTTRCPYCAAPAVVERPPVAGVPEPVFALGFALTHTTAKEHVSRWLRSRSRFTRSGIRSASPGEVKGVYVPAYLYSVLAQARYRASIGENYQETETYTATENGKTVTRTRTVTRTEWRPLEGELSGYVADVLVTASKGLQNAELEALEPFDLRAMARYTPALISGWMAEEPSLTLAECQALARKEAVDRVGVKLTRFMPGDSYRGLEHQARLEWEALDVCLLPVWVLAVKYAEDAPPLRVLVNGQTGAVHGKAPSSPWKVLVAVLGVLLVLAMGWLLTSGGG

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Crispr_ID: NZ_CP012109_28

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_28

8920056-8924501

TypeIII

I-A,I-B,II-B

Consensus_repeat	Method
GTGCTCAACGCCTTCCGGCATCACGGCGAGCGCGAC	PILER-CR
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CRISPRCasFinder
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CRT

61 spacers

cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7

The CRISPR arrays of NZ_CP012109_28

>merge|NZ_CP012109|28|8920056-8924501|PILER-CR,CRISPRCasFinder,CRT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACCCCTGGTACTCGTCGTGCTCCTTGACCATGCCCCGGGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACTAGCGCCCCGCCGCGTCCTTGACCGGCTCGGCGTCCTTGAGCCAGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACTGGTCGTTTGTCCTTGCGTTTCATCCGATGGCGGGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACGCGTCAATGAGTTCCTTCACCAGACCCTGCTTGAGGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACACGAACACCTGCCGGGTCTCGAACAGCTCAAGGCCCGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACAGACCTCGCGCCGCGATTGACTTGCCCAGTCCGGCAGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACAGCGGCCACGGGTTGGACTGGATATTGGGTGCGGTGGTGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACTACGCTACGCATACTGTTCGTTGCGTAGGACGGCGGACGGGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACACAGGGAGGGGTGCGATGGTGGCGAGCGTGCGCGGCGGTGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGATCACCTATCTCTCTGTGGTTCAGGCAGGGGAAGAAGGGGAGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCGCCACCACTCGATGTTCCGACGCACGATGTCGAAGAGCTGGTCGCGCTCGCCGTGATGCCGGAAGGCGTCGAGCACTTGGACGTGGGCTTGCGGCTGAAGTGGGGGGCGAACGTCGCGCTCGCCGTGATACCGGAAGGCGTTGAGCACTTGACTCGTTGGGCACCAAGACGGTCGCGCGCGCCGTGATACCGGAAGGCGTTGAGCAGCACCCCAGCTTGATCTGAGCGCCGTCACTACCGGCGCTCGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACACGACGGGCGATGCGCCCACGGCCACCTAGTAGGCATAGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACTTCTTGATGTTGTGATGCAGGACGCCGTTGATGAGGTCGCGCGCGCCGTGATGCCGGAAGGCGTTGAGCATCAGTGCTGGACCACGATCTCCTTGCCGAAGTGCTTGGGGTCGAACTCGCCGTGATGCCGGAAGGCGTTGAGCACCACTCCCAGTGGTTGCCGATGGCCGACTGGAGACAGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACTCGGCGGCTACGTGGACCTTGGGCGCAGGTTCGGTGTCGCGCTCGCCGTGATGCCGGAATGCGTTGAGCACCCTTGGACACAACCACGGCTGGCAGACCGGTCTTGGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACTTCGACGCTGAGAACGACGTAGGACTGGGTGAAGAGGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACTTGAGCGTGCCCGCCGAAGTCGGCGTACCCGTCACGGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACCTTCTCCATGAGGGCGAACTTCGGCGTGCAGCGAAAAGTCGCGCTCGCCGTGATGCCAGAAGGCGTTGAGCACAGGAAGTCCGGCTCCAGGTAGAAGGGGAACTCCGTGTCCAGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACAGCTGTCGGTCGGCACACCCTCAGCCACCGGCGCATCCACGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACGCGTCGGGGATGCCAGCGAATGACGTGGTGGTGCGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACGTGGTGCCCGACACCACAGGGTTGCCAGACGGCAGGGTAGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACGCGTTCTTGACTGAACTTTTCTTCACCATCTCCGGTCGGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACACTGCTATGCGTCCACGTATGGGCCGTGGGCGCGCGGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACCACCCTGCAGGCTGCAGAACAGCATGGGTGCGAAGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACATCTCCGGCAACTTCTTCACGGCCTTCTTCGCCTTCGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACCGGTAGACGATCTGGGCCTGGAACCCCATCACCTGTCGCGCTCGCCATGATGCCGGAAGGCGTTGAGCACAGGATCAGCTCGCCCGTGCGCCCATCGAACGGCGCGAGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACTTCGTCCAGAGGATGCACCTCAACCCCTGCACGTCGAGTCGCTCTCGCCGTGATGCCGGAAGGCGTTGAGCACCGAAGCGAACGGAGCCTCTCCGCGCATCAGGCAGTGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACGTGTCATTGCCATACCACCGGACCGAGCACCGGGTGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACGTCCGGCCGCGCAGCTCGACCTCAATCTCGACTTCCTGGTGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACATGCACCGACGCGGGATTGAGTGCCATCACACAAGGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACCTCAACAGAATCAAGCTGCCATCGGAACGCGTTCTGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACTTCGAGAGGCCCAGCTTCTCCTTCGCGTTCTGCGTGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACGGTAGGACGCTGGCACTTATACGCGCGTGAGAACCGGGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACGGTAGGACGCTGGCACTTATACGCGCGTGAGAACCGGGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACTCACGCACCCGGGCGACCTCGGGGGCAAGGTACATGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCATCCTTCCCCACCTTGTGCCACGCCATCCCACGTCAGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACTCGCCGAGGAGGTTCAGATGCAGCTTCATGCTCGTGTCGCGCTCGTCGTGATGCCGGAAGGCGTTGAGCACAACACGTCCGCAATCAGCACGTCATCGATGAAGATTGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACGCTCTGGCAGCCTCACGCGCCTTGACCGCTCGCGAGGCGGGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACGTGACGACAGGGCCCTTTCCACGCTTGGCGGCTGTTATGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACAACGTGCCGGTGAAAAACAGCGGGCCAGCACCGTAACGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACGGGGTCATTGTCCGCCTGGGTGAGGTGATTCGCCCGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACAGCATCTGCGCCAACGACGCCAACAGACCGAGCGAGGAGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACCCTTGCCCGCGCTCAGCGCGAGCATACCGCCAGCGGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACTACTCCTCGCGTATGAAGGGACCCTTCAACTTGGGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACCACCACGCGGCGACGCGGTCACACCGCTCCCCGGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACACTTCCACCCTCGCTACTGGAAGGAAACGAGTCGGAGAGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACTTGCTGAACGCCCCACCCGGCCACGCACTGCTTCGGCACGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACCCGTCGAGGCCGCACCACAGCGCATCCACCCACTCCCGGGTCGCGCTCGCCGTGATGCCGGAATGCGTTGAGCACTATTCACCGGCCAAAGCACATACATCCGTCTTAGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACAGCCAGCCGACCGCGCCGGAAGTGTCGAACTGGAAGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACTGTGTCGTCGCTGGTTGTCCGAACCCGGCATCCCGTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACCAGTGCTGGACCACGATCTCCTTGCCGAAGTGCTTGGGTCGCACTCGCCGTGATGCCGGAAGGCGTTGGGCAC

>NZ_CP012109|28|4|8920056-8924501|PILER-CR
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CCCTGGTACTCGTCGTGCTCCTTGACCATGCCCCGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TAGCGCCCCGCCGCGTCCTTGACCGGCTCGGCGTCCTTGAGCCA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TGGTCGTTTGTCCTTGCGTTTCATCCGATGGCGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GCGTCAATGAGTTCCTTCACCAGACCCTGCTTGAG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ACGAACACCTGCCGGGTCTCGAACAGCTCAAGGCCC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	AGACCTCGCGCCGCGATTGACTTGCCCAGTCCGGCA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	AGCGGCCACGGGTTGGACTGGATATTGGGTGCGGTGGT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TACGCTACGCATACTGTTCGTTGCGTAGGACGGCGGACGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ACAGGGAGGGGTGCGATGGTGGCGAGCGTGCGCGGCGGT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGATCAC	CTATCTCTCTGTGGTTCAGGCAGGGGAAGAAGGGGA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCGC	CACCACTCGATGTTCCGACGCACGATGTCGAAGAGCTG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTCGAGCAC	TTGGACGTGGGCTTGCGGCTGAAGTGGGGGGCGAAC
GTCGCGCTCGCCGTGATACCGGAAGGCGTTGAGCAC	TTGACTCGTTGGGCACCAAGACG
GTCGCGCGCGCCGTGATACCGGAAGGCGTTGAGCAG	CACCCCAGCTTGATCTGAGCGCCGTCACTACCGGCGCTC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ACGACGGGCGATGCGCCCACGGCCACCTAGTAGGCATA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TTCTTGATGTTGTGATGCAGGACGCCGTTGATGAG
GTCGCGCGCGCCGTGATGCCGGAAGGCGTTGAGCAT	CAGTGCTGGACCACGATCTCCTTGCCGAAGTGCTTGGGG
TCGAACTCGCCGTGATGCCGGAAGGCGTTGAGCACC	ACTCCCAGTGGTTGCCGATGGCCGACTGGAGACAG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACT	CGGCGGCTACGTGGACCTTGGGCGCAGGTTCGGTG
TCGCGCTCGCCGTGATGCCGGAATGCGTTGAGCACC	CTTGGACACAACCACGGCTGGCAGACCGGTCTTGG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACT	TCGACGCTGAGAACGACGTAGGACTGGGTGAAGAGG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACT	TGAGCGTGCCCGCCGAAGTCGGCGTACCCGTCACGG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACC	TTCTCCATGAGGGCGAACTTCGGCGTGCAGCGAAAAG
TCGCGCTCGCCGTGATGCCAGAAGGCGTTGAGCACA	GGAAGTCCGGCTCCAGGTAGAAGGGGAACTCCGTGTCCAG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACA	GCTGTCGGTCGGCACACCCTCAGCCACCGGCGCATCCACG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACG	CGTCGGGGATGCCAGCGAATGACGTGGTGGTGCG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACG	TGGTGCCCGACACCACAGGGTTGCCAGACGGCAGGGTAG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACG	CGTTCTTGACTGAACTTTTCTTCACCATCTCCGGTCGG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACA	CTGCTATGCGTCCACGTATGGGCCGTGGGCGCGCGG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACC	ACCCTGCAGGCTGCAGAACAGCATGGGTGCGAAG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACA	TCTCCGGCAACTTCTTCACGGCCTTCTTCGCCTTCG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACC	GGTAGACGATCTGGGCCTGGAACCCCATCACCTG
TCGCGCTCGCCATGATGCCGGAAGGCGTTGAGCACA	GGATCAGCTCGCCCGTGCGCCCATCGAACGGCGCGAG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACT	TCGTCCAGAGGATGCACCTCAACCCCTGCACGTCGAG
TCGCTCTCGCCGTGATGCCGGAAGGCGTTGAGCACC	GAAGCGAACGGAGCCTCTCCGCGCATCAGGCAGTG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACG	TGTCATTGCCATACCACCGGACCGAGCACCGGGTG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACG	TCCGGCCGCGCAGCTCGACCTCAATCTCGACTTCCTGGTG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACA	TGCACCGACGCGGGATTGAGTGCCATCACACAAGG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACC	TCAACAGAATCAAGCTGCCATCGGAACGCGTTCTG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACT	TCGAGAGGCCCAGCTTCTCCTTCGCGTTCTGCGTG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACG	GTAGGACGCTGGCACTTATACGCGCGTGAGAACCGGG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACG	GTAGGACGCTGGCACTTATACGCGCGTGAGAACCGGG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACT	CACGCACCCGGGCGACCTCGGGGGCAAGGTACATG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCATC	CTTCCCCACCTTGTGCCACGCCATCCCACGTCAG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACT	CGCCGAGGAGGTTCAGATGCAGCTTCATGCTCGTG
TCGCGCTCGTCGTGATGCCGGAAGGCGTTGAGCACA	ACACGTCCGCAATCAGCACGTCATCGATGAAGATTG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACG	CTCTGGCAGCCTCACGCGCCTTGACCGCTCGCGAGGCGGG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACG	TGACGACAGGGCCCTTTCCACGCTTGGCGGCTGTTATG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACA	ACGTGCCGGTGAAAAACAGCGGGCCAGCACCGTAACG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACG	GGGTCATTGTCCGCCTGGGTGAGGTGATTCGCCCG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACA	GCATCTGCGCCAACGACGCCAACAGACCGAGCGAGGAG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACC	CTTGCCCGCGCTCAGCGCGAGCATACCGCCAGCGG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACT	ACTCCTCGCGTATGAAGGGACCCTTCAACTTGGG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACC	ACCACGCGGCGACGCGGTCACACCGCTCCCCGG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACA	CTTCCACCCTCGCTACTGGAAGGAAACGAGTCGGAGAG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACT	TGCTGAACGCCCCACCCGGCCACGCACTGCTTCGGCACG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACC	CGTCGAGGCCGCACCACAGCGCATCCACCCACTCCCGGG
TCGCGCTCGCCGTGATGCCGGAATGCGTTGAGCACT	ATTCACCGGCCAAAGCACATACATCCGTCTTAG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACA	GCCAGCCGACCGCGCCGGAAGTGTCGAACTGGAAG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACT	GTGTCGTCGCTGGTTGTCCGAACCCGGCATCCCG
TCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCACC	AGTGCTGGACCACGATCTCCTTGCCGAAGTGCTTGGG
TCGCACTCGCCGTGATGCCGGAAGGCGTTGGGCAC

>NZ_CP012109|28|21|8920056-8924501|CRISPRCasFinder
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CCCTGGTACTCGTCGTGCTCCTTGACCATGCCCCGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TAGCGCCCCGCCGCGTCCTTGACCGGCTCGGCGTCCTTGAGCCA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TGGTCGTTTGTCCTTGCGTTTCATCCGATGGCGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GCGTCAATGAGTTCCTTCACCAGACCCTGCTTGAG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ACGAACACCTGCCGGGTCTCGAACAGCTCAAGGCCC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	AGACCTCGCGCCGCGATTGACTTGCCCAGTCCGGCA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	AGCGGCCACGGGTTGGACTGGATATTGGGTGCGGTGGT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TACGCTACGCATACTGTTCGTTGCGTAGGACGGCGGACGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ACAGGGAGGGGTGCGATGGTGGCGAGCGTGCGCGGCGGT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGATCAC	CTATCTCTCTGTGGTTCAGGCAGGGGAAGAAGGGGA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCGC	CACCACTCGATGTTCCGACGCACGATGTCGAAGAGCTG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTCGAGCAC	TTGGACGTGGGCTTGCGGCTGAAGTGGGGGGCGAAC
GTCGCGCTCGCCGTGATACCGGAAGGCGTTGAGCAC	TTGACTCGTTGGGCACCAAGACG
GTCGCGCGCGCCGTGATACCGGAAGGCGTTGAGCAG	CACCCCAGCTTGATCTGAGCGCCGTCACTACCGGCGCTC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ACGACGGGCGATGCGCCCACGGCCACCTAGTAGGCATA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TTCTTGATGTTGTGATGCAGGACGCCGTTGATGAG
GTCGCGCGCGCCGTGATGCCGGAAGGCGTTGAGCAT	CAGTGCTGGACCACGATCTCCTTGCCGAAGTGCTTGGG
GTCGAACTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CACTCCCAGTGGTTGCCGATGGCCGACTGGAGACA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TCGGCGGCTACGTGGACCTTGGGCGCAGGTTCGGT
GTCGCGCTCGCCGTGATGCCGGAATGCGTTGAGCAC	CCTTGGACACAACCACGGCTGGCAGACCGGTCTTG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TTCGACGCTGAGAACGACGTAGGACTGGGTGAAGAG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TTGAGCGTGCCCGCCGAAGTCGGCGTACCCGTCACG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CTTCTCCATGAGGGCGAACTTCGGCGTGCAGCGAAAA
GTCGCGCTCGCCGTGATGCCAGAAGGCGTTGAGCAC	AGGAAGTCCGGCTCCAGGTAGAAGGGGAACTCCGTGTCCA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	AGCTGTCGGTCGGCACACCCTCAGCCACCGGCGCATCCAC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GCGTCGGGGATGCCAGCGAATGACGTGGTGGTGC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GTGGTGCCCGACACCACAGGGTTGCCAGACGGCAGGGTA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GCGTTCTTGACTGAACTTTTCTTCACCATCTCCGGTCG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ACTGCTATGCGTCCACGTATGGGCCGTGGGCGCGCG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CACCCTGCAGGCTGCAGAACAGCATGGGTGCGAA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ATCTCCGGCAACTTCTTCACGGCCTTCTTCGCCTTC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CGGTAGACGATCTGGGCCTGGAACCCCATCACCT
GTCGCGCTCGCCATGATGCCGGAAGGCGTTGAGCAC	AGGATCAGCTCGCCCGTGCGCCCATCGAACGGCGCGA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TTCGTCCAGAGGATGCACCTCAACCCCTGCACGTCGA
GTCGCTCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CGAAGCGAACGGAGCCTCTCCGCGCATCAGGCAGT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GTGTCATTGCCATACCACCGGACCGAGCACCGGGT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GTCCGGCCGCGCAGCTCGACCTCAATCTCGACTTCCTGGT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ATGCACCGACGCGGGATTGAGTGCCATCACACAAG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CTCAACAGAATCAAGCTGCCATCGGAACGCGTTCT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TTCGAGAGGCCCAGCTTCTCCTTCGCGTTCTGCGT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GGTAGGACGCTGGCACTTATACGCGCGTGAGAACCGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GGTAGGACGCTGGCACTTATACGCGCGTGAGAACCGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TCACGCACCCGGGCGACCTCGGGGGCAAGGTACAT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAT	CCTTCCCCACCTTGTGCCACGCCATCCCACGTCA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TCGCCGAGGAGGTTCAGATGCAGCTTCATGCTCGT
GTCGCGCTCGTCGTGATGCCGGAAGGCGTTGAGCAC	AACACGTCCGCAATCAGCACGTCATCGATGAAGATT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GCTCTGGCAGCCTCACGCGCCTTGACCGCTCGCGAGGCGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GTGACGACAGGGCCCTTTCCACGCTTGGCGGCTGTTAT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	AACGTGCCGGTGAAAAACAGCGGGCCAGCACCGTAAC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GGGGTCATTGTCCGCCTGGGTGAGGTGATTCGCCC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	AGCATCTGCGCCAACGACGCCAACAGACCGAGCGAGGA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CCTTGCCCGCGCTCAGCGCGAGCATACCGCCAGCG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TACTCCTCGCGTATGAAGGGACCCTTCAACTTGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CACCACGCGGCGACGCGGTCACACCGCTCCCCG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ACTTCCACCCTCGCTACTGGAAGGAAACGAGTCGGAGA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TTGCTGAACGCCCCACCCGGCCACGCACTGCTTCGGCAC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CCGTCGAGGCCGCACCACAGCGCATCCACCCACTCCCGG
GTCGCGCTCGCCGTGATGCCGGAATGCGTTGAGCAC	TATTCACCGGCCAAAGCACATACATCCGTCTTA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	AGCCAGCCGACCGCGCCGGAAGTGTCGAACTGGAA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TGTGTCGTCGCTGGTTGTCCGAACCCGGCATCCC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CAGTGCTGGACCACGATCTCCTTGCCGAAGTGCTTGG
GTCGCACTCGCCGTGATGCCGGAAGGCGTTGGGCAC

>NZ_CP012109|28|5|8920056-8924501|CRT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CCCTGGTACTCGTCGTGCTCCTTGACCATGCCCCGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TAGCGCCCCGCCGCGTCCTTGACCGGCTCGGCGTCCTTGAGCCA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TGGTCGTTTGTCCTTGCGTTTCATCCGATGGCGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GCGTCAATGAGTTCCTTCACCAGACCCTGCTTGAG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ACGAACACCTGCCGGGTCTCGAACAGCTCAAGGCCC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	AGACCTCGCGCCGCGATTGACTTGCCCAGTCCGGCA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	AGCGGCCACGGGTTGGACTGGATATTGGGTGCGGTGGT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TACGCTACGCATACTGTTCGTTGCGTAGGACGGCGGACGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ACAGGGAGGGGTGCGATGGTGGCGAGCGTGCGCGGCGGT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGATCAC	CTATCTCTCTGTGGTTCAGGCAGGGGAAGAAGGGGA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCGC	CACCACTCGATGTTCCGACGCACGATGTCGAAGAGCTG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTCGAGCAC	TTGGACGTGGGCTTGCGGCTGAAGTGGGGGGCGAAC
GTCGCGCTCGCCGTGATACCGGAAGGCGTTGAGCAC	TTGACTCGTTGGGCACCAAGACG
GTCGCGCGCGCCGTGATACCGGAAGGCGTTGAGCAG	CACCCCAGCTTGATCTGAGCGCCGTCACTACCGGCGCTC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ACGACGGGCGATGCGCCCACGGCCACCTAGTAGGCATA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TTCTTGATGTTGTGATGCAGGACGCCGTTGATGAG
GTCGCGCGCGCCGTGATGCCGGAAGGCGTTGAGCAT	CAGTGCTGGACCACGATCTCCTTGCCGAAGTGCTTGGG
GTCGAACTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CACTCCCAGTGGTTGCCGATGGCCGACTGGAGACA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TCGGCGGCTACGTGGACCTTGGGCGCAGGTTCGGT
GTCGCGCTCGCCGTGATGCCGGAATGCGTTGAGCAC	CCTTGGACACAACCACGGCTGGCAGACCGGTCTTG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TTCGACGCTGAGAACGACGTAGGACTGGGTGAAGAG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TTGAGCGTGCCCGCCGAAGTCGGCGTACCCGTCACG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CTTCTCCATGAGGGCGAACTTCGGCGTGCAGCGAAAA
GTCGCGCTCGCCGTGATGCCAGAAGGCGTTGAGCAC	AGGAAGTCCGGCTCCAGGTAGAAGGGGAACTCCGTGTCCA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	AGCTGTCGGTCGGCACACCCTCAGCCACCGGCGCATCCAC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GCGTCGGGGATGCCAGCGAATGACGTGGTGGTGC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GTGGTGCCCGACACCACAGGGTTGCCAGACGGCAGGGTA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GCGTTCTTGACTGAACTTTTCTTCACCATCTCCGGTCG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ACTGCTATGCGTCCACGTATGGGCCGTGGGCGCGCG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CACCCTGCAGGCTGCAGAACAGCATGGGTGCGAA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ATCTCCGGCAACTTCTTCACGGCCTTCTTCGCCTTC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CGGTAGACGATCTGGGCCTGGAACCCCATCACCT
GTCGCGCTCGCCATGATGCCGGAAGGCGTTGAGCAC	AGGATCAGCTCGCCCGTGCGCCCATCGAACGGCGCGA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TTCGTCCAGAGGATGCACCTCAACCCCTGCACGTCGA
GTCGCTCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CGAAGCGAACGGAGCCTCTCCGCGCATCAGGCAGT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GTGTCATTGCCATACCACCGGACCGAGCACCGGGT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GTCCGGCCGCGCAGCTCGACCTCAATCTCGACTTCCTGGT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ATGCACCGACGCGGGATTGAGTGCCATCACACAAG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CTCAACAGAATCAAGCTGCCATCGGAACGCGTTCT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TTCGAGAGGCCCAGCTTCTCCTTCGCGTTCTGCGT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GGTAGGACGCTGGCACTTATACGCGCGTGAGAACCGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GGTAGGACGCTGGCACTTATACGCGCGTGAGAACCGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TCACGCACCCGGGCGACCTCGGGGGCAAGGTACAT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAT	CCTTCCCCACCTTGTGCCACGCCATCCCACGTCA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TCGCCGAGGAGGTTCAGATGCAGCTTCATGCTCGT
GTCGCGCTCGTCGTGATGCCGGAAGGCGTTGAGCAC	AACACGTCCGCAATCAGCACGTCATCGATGAAGATT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GCTCTGGCAGCCTCACGCGCCTTGACCGCTCGCGAGGCGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GTGACGACAGGGCCCTTTCCACGCTTGGCGGCTGTTAT
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	AACGTGCCGGTGAAAAACAGCGGGCCAGCACCGTAAC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	GGGGTCATTGTCCGCCTGGGTGAGGTGATTCGCCC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	AGCATCTGCGCCAACGACGCCAACAGACCGAGCGAGGA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CCTTGCCCGCGCTCAGCGCGAGCATACCGCCAGCG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TACTCCTCGCGTATGAAGGGACCCTTCAACTTGG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CACCACGCGGCGACGCGGTCACACCGCTCCCCG
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	ACTTCCACCCTCGCTACTGGAAGGAAACGAGTCGGAGA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TTGCTGAACGCCCCACCCGGCCACGCACTGCTTCGGCAC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CCGTCGAGGCCGCACCACAGCGCATCCACCCACTCCCGG
GTCGCGCTCGCCGTGATGCCGGAATGCGTTGAGCAC	TATTCACCGGCCAAAGCACATACATCCGTCTTA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	AGCCAGCCGACCGCGCCGGAAGTGTCGAACTGGAA
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	TGTGTCGTCGCTGGTTGTCCGAACCCGGCATCCC
GTCGCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC	CAGTGCTGGACCACGATCTCCTTGCCGAAGTGCTTGG
GTCGCACTCGCCGTGATGCCGGAAGGCGTTGGGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002640003.1\|8913700_8915491_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cls000742_cas10_CAS-III	gnl\|CDD\|274208
NZ_CP012109.1\|WP_021781226.1\|8924861_8925731_+\|DUF2381-family-protein	unknown	unknown	gnl\|CDD\|370554
NZ_CP012109.1\|WP_002634053.1\|8929481_8931005_+\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|236815
NZ_CP012109.1\|WP_002640006.1\|8917633_8918035_+\|type-III-B-CRISPR-module-associated-protein-Cmr5	cmr5gr11	cd09749_cmr5gr11_CAS-III-B	gnl\|CDD\|187880
NZ_CP012109.1\|WP_002640004.1\|8915487_8916690_+\|type-III-B-CRISPR-module-associated-protein-Cmr3	cmr3gr5	cd09748_cmr3gr5_CAS-III-B	gnl\|CDD\|370625
NZ_CP012109.1\|WP_002634047.1\|8937831_8938908_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235715
NZ_CP012109.1\|WP_002640008.1\|8919130_8919757_+\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	cas6	cd09703_cas6_CAS-I:CAS-III	gnl\|CDD\|274308
NZ_CP012109.1\|WP_002634052.1\|8931221_8934203_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223627
NZ_CP012109.1\|WP_002634056.1\|8925727_8927524_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012109.1\|WP_002634054.1\|8927853_8929485_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|184118
NZ_CP012109.1\|WP_044889970.1\|8936097_8936862_-\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP012109.1\|WP_044890027.1\|8918057_8919134_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	COG1604_cmr6gr7_CAS-III-B	gnl\|CDD\|187792
NZ_CP012109.1\|WP_082282954.1\|8936863_8937808_-\|DUF4150-domain-containing-protein	unknown	unknown	gnl\|CDD\|372665
NZ_CP012109.1\|WP_002639998.1\|8908404_8909253_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012109.1\|WP_044889971.1\|8912220_8913696_+\|CRISPR-associated-protein-Cmr1	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	gnl\|CDD\|224286
NZ_CP012109.1\|WP_002634051.1\|8934199_8935132_+\|SWIM-zinc-finger-family-protein	unknown	unknown	gnl\|CDD\|226729
NZ_CP012109.1\|WP_002640000.1\|8910295_8912125_+\|SAVED-domain-containing-protein	unknown	unknown	gnl\|CDD\|380122
NZ_CP012109.1\|WP_144429675.1\|8935289_8936051_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_144429811.1\|8909362_8910205_+\|nucleotidyltransferase	unknown	unknown	gnl\|CDD\|143390
NZ_CP012109.1\|WP_002640005.1\|8916692_8917637_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|274210

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002640003.1\|8913700_8915491_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|274208	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B. This model represent a Crm2 family of the CRISPR-associated RAMP module, a set of six genes recurring found together in prokaryotic genomes. This gene cluster is found only in species with CRISPR repeats, usually near the repeats themselves. Because most of the six (but not this family) contain RAMP domains, and because its appearance in a genome appears to depend on other CRISPR-associated Cas genes, the set is designated the CRISPR RAMP module. This protein, typified by TM1794 from Thermotoga maritima, is designated Crm2, for CRISPR RAMP Module protein 2.	4.42683e-98
NZ_CP012109.1\|WP_021781226.1\|8924861_8925731_+\|DUF2381-family-protein	gnl\|CDD\|370554	pfam09544, DUF2381, Protein of unknown function (DUF2381). This family consists of at least 8 paralogs in Myxococcus xanthus, a member of the Deltaproteobacteria. The function is unknown.	6.93817e-74
NZ_CP012109.1\|WP_002634053.1\|8929481_8931005_+\|VWA-domain-containing-protein	gnl\|CDD\|236815	PRK10997, yieM, ATPase RavA stimulator ViaA.	9.39621e-41
NZ_CP012109.1\|WP_002640006.1\|8917633_8918035_+\|type-III-B-CRISPR-module-associated-protein-Cmr5	gnl\|CDD\|187880	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; signature gene for subtype III-B.	5.57444e-29
NZ_CP012109.1\|WP_002640004.1\|8915487_8916690_+\|type-III-B-CRISPR-module-associated-protein-Cmr3	gnl\|CDD\|370625	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3). CRISPR is a term for Clustered Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This highly divergent family, found in at least ten different archaeal and bacterial species, is represented by TM1793 from Thermotoga maritima.	2.87363e-72
NZ_CP012109.1\|WP_002634047.1\|8937831_8938908_-\|hypothetical-protein	gnl\|CDD\|235715	PRK06147, PRK06147, 3-oxoacyl-(acyl carrier protein) synthase; Validated.	2.78525e-35
NZ_CP012109.1\|WP_002640008.1\|8919130_8919757_+\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	gnl\|CDD\|274308	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN. Members of this protein family resemble the Cas6 proteins described by TIGR01877 in having a C-terminal motif GXGXXXXXGXG, where the single X of each GXG is hydrophobic and the spacer XXXXX has at least one Lys or Arg. Examples are found in cas gene operons of CRISPR regions in Anabaena variabilis ATCC 29413, Leptospira interrogans, Gemmata obscuriglobus UQM 2246, and twice in Myxococcus xanthus DK 1622. Oddly, an orphan member is found in Thiobacillus denitrificans ATCC 25259, whose genome does not seem to contain other evidence of CRISPR repeats or cas genes.	4.72732e-80
NZ_CP012109.1\|WP_002634052.1\|8931221_8934203_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223627	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair].	5.5343e-132
NZ_CP012109.1\|WP_002634056.1\|8925727_8927524_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.96743e-55
NZ_CP012109.1\|WP_002634054.1\|8927853_8929485_+\|AAA-family-ATPase	gnl\|CDD\|184118	PRK13531, PRK13531, regulatory ATPase RavA; Provisional.	2.32419e-82
NZ_CP012109.1\|WP_044889970.1\|8936097_8936862_-\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	6.45091e-08
NZ_CP012109.1\|WP_044890027.1\|8918057_8919134_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	3.78041e-36
NZ_CP012109.1\|WP_082282954.1\|8936863_8937808_-\|DUF4150-domain-containing-protein	gnl\|CDD\|372665	pfam13665, DUF4150, Domain of unknown function (DUF4150).	2.94653e-37
NZ_CP012109.1\|WP_002639998.1\|8908404_8909253_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.33005e-66
NZ_CP012109.1\|WP_044889971.1\|8912220_8913696_+\|CRISPR-associated-protein-Cmr1	gnl\|CDD\|224286	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	3.39205e-17
NZ_CP012109.1\|WP_002634051.1\|8934199_8935132_+\|SWIM-zinc-finger-family-protein	gnl\|CDD\|226729	COG4279, COG4279, Uncharacterized conserved protein [Function unknown].	6.74484e-61
NZ_CP012109.1\|WP_002640000.1\|8910295_8912125_+\|SAVED-domain-containing-protein	gnl\|CDD\|380122	pfam18145, SAVED, SMODS-associated and fused to various effectors sensor domain. Predicted to function as a sensor domain, sensing nucleotides or nucleotide derivatives generated by SMODS and other nucleotide synthetase domains. The sensing of ligands by SAVED is predicted to activate effectors deployed by a class of conflict systems which are reliant on the on the production and sensing of the nucleotide second messengers.	2.6296e-11
NZ_CP012109.1\|WP_144429811.1\|8909362_8910205_+\|nucleotidyltransferase	gnl\|CDD\|143390	cd05400, NT_2-5OAS_ClassI-CCAase, Nucleotidyltransferase (NT) domain of 2'5'-oligoadenylate (2-5A)synthetase (2-5OAS) and class I CCA-adding enzyme. In vertebrates, 2-5OASs are induced by interferon during the innate immune response to protect against RNA virus infections. In the presence of an RNA activator, 2-5OASs catalyze the oligomerization of ATP into 2-5A. 2-5A activates endoribonuclease L, which leads to degradation of the viral RNA. 2-5OASs are also implicated in cell growth control, differentiation, and apoptosis. This family includes human OAS1, -2, -3, and OASL. CCA-adding enzymes add the sequence [cytidine(C)-cytidine-adenosine (A)], one nucleotide at a time, onto the 3' end of tRNA, in a template-independent reaction. This class I group includes the archaeal Sulfolobus shibatae and Archeoglobus fulgidus CCA-adding enzymes. It belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, coordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this family.	1.65947e-27
NZ_CP012109.1\|WP_002640005.1\|8916692_8917637_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	6.17235e-68

>NZ_CP012109.1|WP_002640008.1|8919130_8919757_+|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6
MTSFDLLFPVRGGPVPLDHGYVLFSSLCARVPELHGRTDLGVFTLRGERAEGASLHLGRGTLRLRCSPELVPHLLPLTSAPLNVAGREVVLGSPVVRALEPASSLNARVVTFKHALDAASFLRGVSRSLQELECEARPVLGRRRVVCIQGRRVVGYALELQGLSKEDSLRVQARGMGGRRHMGCGLFLPPRPAVRGVVPLREGLATAA
>NZ_CP012109.1|WP_044890027.1|8918057_8919134_+|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MRVALRPLAGRVEEGAHAGLLYERYAPAKVHGKDPKTDPWEQWLSGLETHPEPKGYAVAYKRWEESLRQSYTVTFRARADSRLLVGHGNASPTGVGLTLHHTWGVPVVPGSSLKGVLAGYLRAVYGDDAADARRRLFGVPGEDGAQAHAGEVIFHDAQWVPHPRESEGQKPPAFLARDVLTVHHAGWYGGSSEWPNDYESPNPVAFLTVRPGGCFLVALSLAPGMEADPQAEAFLSWTARRLDEALRHWGVGGKTAAGYGRLVRQGNFDIRSPRRPMLASPVLTEFLAWVDARREDKTPKRQVLTSFEEMWLPRLMTLAPAARDEGAAGLRKLINKHPKLETVMDNLIARMMGTGGSP
>NZ_CP012109.1|WP_002640006.1|8917633_8918035_+|type-III-B-CRISPR-module-associated-protein-Cmr5
MTARTREQQRALEVYARVRAVPSGLCAEYKPRVNGLGAAVLRDGLAAALSFLERERAKNEAARQLLKDLAFCLSHARLPGLTKPGLSDESLPEEVRRLELSEYMLATRESLRLLIWFRRAVQATFPAEVPGDA
>NZ_CP012109.1|WP_002640005.1|8916692_8917637_+|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MESRPYLLHALSPLHVGTGQSVGVIDLPLARMKATGIPFVPGSSLKGVLRELLRPREEAGDAKNLHDAVFGPRRLTAGPAGDEPGDYAGALVVGDARLLALPVRSFVGTFALVTSPLLLALARRDLGETAGAWPKVEPLGKLGARVASVKGNSVVYGAGTPSARVYLEDLDLPVEPKDDAALAAWAQGLCGLLPEPERDLLAERLVLVDDETMSFLWETATQVDTRVSIDPVTGTAAPGQLWTEESLPAETLLVGVLGATGTFNKAPRKLTADEVLGEALGGEGTVLQLGGKATVGRGRCRLLGWTMASTRGGR
>NZ_CP012109.1|WP_002640004.1|8915487_8916690_+|type-III-B-CRISPR-module-associated-protein-Cmr3
MSDACFALLPRDGLSAKDGRGWYTSEVGRGYSLPWPLPTTVRGALRAAWGHDVMAATGITLSPASWEHRSEQVGLQRFIALRRALGESFTRAHRMWPVPADAVRVLDERGAECLVRLEPHPGGSRTLGPDEDDAREALWHPRRSASGKPLTSPLFWPESRMMAWLSGAPVSPMPEQEGLSQRTDIHLAIDVETQASQDSMLHSREVVEMLRAQRQAGGFAVEEWALGLSCVWPDPASGLPRGPVGLGGRRRLSSVERLDVALFAMPDALAQRTRGLRLVLATPAEFQRGWLPDGFERVAGAPPRYVGRLPCVDAPVVLRAALVPRALEVSGWDMVLRRPRPTRRWVPAGAVYFFEKHGGGDFTAEELRALWLASWGSGHAEALGQVLPGVWQPPHHGQGA
>NZ_CP012109.1|WP_002640003.1|8913700_8915491_+|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MKHVIVLKVGPVQGYIAQARRTRDLWYGSQLLSKLAREMARSLEASGASLIFPHPDQVRDTSTGVANKVVALVEDAPEQAARRARDAAKSLLRAEWKRVFDKCEALLILGAEALAEEQLDSFLEVHAAWALVEDAPTGYATALHEAERALEARRGLREFAPWKQTPPDGTHKSSLDGARPSLLRRDREKGRLWSALRIGLREELDALGVLKRAGGTPGQFVPVPSIGLAAWLQAARARHPELLARLKEACKALAFQSVSTRSRPWVEAFPYDGQLLHPERLQPYFEEYAIPEARQAAARFGRDFVEPLRRAMKTEPFPYVACLVADGDRMGHALEQLAKRPDGHQAHQRVSRALAGFTQEAKRIVEVNHRGVLVYAGGDDVLAFVTPMDAPACAQALATAFRTALEAALAGTGADVPTLSVGVGVGHVLESLGELLTLGRRAETAAKKAGRNALALLVAKHAGRERLWTAPWTADPVGQLEKDVALLTRDTLPLPLGKVHEVAALARRFPAGTADAPTLAQLLKDEAGRILARTEAGRAPKPLTPAEVGLELSTDPHAHESPWVALERWSSRLLVADTFARAGRGLASAEDKEGAR
>NZ_CP012109.1|WP_044889971.1|8912220_8913696_+|CRISPR-associated-protein-Cmr1
MSPLDLPEPSSTEASFLRRRSASAPPLESFTLSLKTVTPILGGGVVARSLELPTVDIIRVPTLRGHLRFWWRALYGHAFAARGPAGAEALAREERQLWGGMGGAKTQDDDDAGARRSQVELRVLEVRPAGEDTGKIDLGALPSYALWPARNGKGEADLPRWKPGLRFTLEVIAPQGEVMAQVRNAVRAWILFGGYGSRVRRGCGAVCLEPSTPDIAQWLPASADRASLRRLFGDLPLFSPELAERPGDMPLLRGAHLFRGDVSASQRDGEKVWLSALGWLRDFRQGTQPTSSGNTEELGVARNPGEGKRAGRSNWPEADKVRRFARAARHDRRAGNAYPDVHAPRKQHSATPAWPRSGFGLPIVFHFQQKRREGGDYLPKEPEDVQLQWERQVGNQWESMDRLASPLIVKALPLADGRFEPIALWLERGSPKGGQVVMTQFKDADPRTRVSFAHAFRASDDQPLFKPLQRADNLRDAFFLWLKETRKAQEA
>NZ_CP012109.1|WP_002640000.1|8910295_8912125_+|SAVED-domain-containing-protein
MRSEDIPITPRTRALIVRYEQDRPVIEATARDTLIRYGLEGDRDVDSVVLHPHDPARAARSLPGQEWSESFDEHERFAAALLEREAELRIDHLPVHIFGCAPLALMLELASRLPRRPVCVYQQAQDGSWSLGYDRMIAPATEDFFQVEGLPSGRQGGRGHVLLVVEVTRAIRDNVRSKVSAWLPEASLLTTVCLRPVAGPSTTAVQNPGQVARAAVQFREVLDRLHELLDGAESVVLAIDAPGSFAAALGTVVNPTTQHPLTLLHFNADRQVYDRVHVIRARRVVAPRVPTADDKLAATQVLRAVQRVHTELVAWLKEPAQQPFVEHIDGQAYLRSEIEDDPAFERTPLFRHGAGKWKLDWELLLGLGALRERLQSQDDWKECLRLFLIHEAFHVRQGGLTSYSYRGIGRAGFVLEAADYDADAVGVEVALAWRKAKQGGTVKDVGQVKTLESIVWNSLEILRVFEPVRPVRELAERRLRRYLIWLFHACRFSVLAVRSPDAEVRDELERVTVELVGLPAFRDPHESYFQQRVRLSLEDSREEVMLAIYFRHRLVRMDNHRAWVEDLLQSLRDWEASSREELQDRVRLLFERLFERHPELLAARRTDAR
>NZ_CP012109.1|WP_144429811.1|8909362_8910205_+|nucleotidyltransferase
MERFISSLELTEGQRDEVSRQHTLVREELSRRLAGCETSFLSGSYSRSTAIRPLHDIDIFTVVGRASSTPPETPDAALKRVRQALHEAWPNKELPILQQHSVHLEFTKSGIEFDVVPAYQHLSQELFLIPEGNTGRWIHTNPRIHKGLSTDANELAGKKFKPLIKAVKHWNRQHGSSPLRSFHLEVMGYEAFSQAPVGYLEGLHTLFAFMAGRVDRPVPDPAGLGGKVDARMTLGQRMAARNAFQGAARTVRLALSERDSNPERAHLRLRELFGETYRYR
>NZ_CP012109.1|WP_002639998.1|8908404_8909253_+|serine/threonine-protein-kinase
MLPQGTQAGAYRIERKADTGGTSDVYEGRDASGGPVAIKVLATRWCVHAEMVARFLQEAQSLLSLRHPHLVQGLAVGLIEEKHPYLVLEWLPRSLEQGLAAEGGQFKDDDCARIVHQLAGALSLLHENGWVHRDLKPANVLLACEGPGRVDVRLSDLGLAKRLSGPEAPDSGLPLSTAEESFLGSRHYMAPEQWVSAKRVGPAVDVYALGVLWFQMLAGRLPFPSEAEHELMFQHVTARPPTELLEAVASGTTVEMVARMLDKVAGRRPPLSDVLALTSGTR
>NZ_CP012109.1|WP_021781226.1|8924861_8925731_+|DUF2381-family-protein
MLQPFRLALVLALVSGAAAANEQAPGARVRRERAVTVARTPAEPLPVVHVSGDTPTVFLFNSPIQKRTLSFDASRLRVLDAGERSFIVQPVAHLGDGERQEIGVFFADGQQPARAAFVLMIHSAEVDSRIDVQRPEPPNTACQPTAHAPTPKPEDFVLLGYVDAQGVTASSRKGKRVMMQGLNLDEFVAYRGTGWILADMRIVNGTTHPAWTPREATFVGRDGVSLRARLVTENSGAILPGKDGRILAVVDVPKTSSDLVFTLEVRGNGDRRLTIPDVRFPEPVAEEAP
>NZ_CP012109.1|WP_002634056.1|8925727_8927524_+|serine/threonine-protein-kinase
MNATMLHVPPGSLIDGWQVSKPLGDGGFAFVFLGEKNGRHRAIKVAQHRESSGDPKQTHARTLRELTALLMLDHPHIVRPQGYGLAESGNLYLALDYVDGWTLAEWAERKHPTVREIVAVFEKLAGALSYMHGRGILHRDLKLSNVLIRKSDGEPVIIDFSCATYALAEHLTDGGLPPGTDRYRAPEQFKFLREHKDEHRARYAFQVTDEIFAVGVMLHELLTDPRPTELRPRFDLNSHTLRPPPPRLVNARVPAVLSDLVEHILARDPRTRPVDTEALCRELADLRAERSAEYDVPAHPPAEQRRGGPPPAALAIPSKPQPMEREVARMERPLRAGRWLAGLACIVALVMAAALWRAPGHVPSESRQATAPPLPAATPHSPPSRIAPPAMTPDSASTVTVPGPAIAAAPKEGFTLKTPVPEVSPSARALRPPKKSVAAVQCASLSLVAALAAGCPGAQIRPEAFTCPAGAEEAMREQLHWEYRAGFSLHLDHSQEQFDGVWFTPGAEVVSVAPEVNDHRQREVVPAGTRFYGKAYYLSDKMGRADGPALVIRYDRVKLPGQAEYPICFVHEGTVEEFKDGRVKASNRGRGYVVHRWP
>NZ_CP012109.1|WP_002634054.1|8927853_8929485_+|AAA-family-ATPase
MSEALKESPPDLAARLKTLRDGLLTGLVERDVPVRLALLATLAGEHLLLVGPPGTAKSLVARRLHQAFASTTYFERLLTRFTVPEELFGPLSIKGLEEDRYERLTEAYLPKASIAFLDEIFKANSAILNALLTLLNEREFDNGTRRESTPLIAVVGASNELPECEELDALFDRFLLRCHVGPVSKSGFPALLGLRGDVAAEVATHLRLSAEDLSAVQQAASAVAVPDDVVALLSELRDWCTAEKLQVSDRRWRKVVKLLQTAALTNGRNRVSIWDCWLLQHCLWNEPEQRAKVYDWYAARAGASAAMDPSRLTRIVVSWEARLKQDQDSRSQVRDAAGTLLFKDSTGKPTTNNAHTEQARRGKDLLFLAPDGARTVDPNYYRDRGEIRDRANAGQGFTLAELNPLYVQDRHYGWREFKHWSNRDAYVADKSNWHMDALPLPPLVEPTRQKPAHVEACLKELGTVRQQVETYKEQLLAHIASLDADIRTHLWVTDDFAEPAARSLGATRRVVETLLGRIEKLRQGFEMLPREQDVGGASVEKGP
>NZ_CP012109.1|WP_002634053.1|8929481_8931005_+|VWA-domain-containing-protein
MKEAFDAGALERGYAFLDDCPEQFLQALITLPVGSLPERVHGLRAWRDSLLDGRFPPPGTWPPPEIAAPARLAAESLGFLRFCKGQPELVDAFLRDVLVSFTRQASEVRAEIATRLRTLEQLERKRLEKQESQAVTRGPRKRKATHIDEVMLARLRQQAEREASQRTVTEDAELIARWGERTREWAAISDVFGDLGELMGRGWDLSLGVLKHTGWTDLVRLRELVRQLLQFADIVRTLGRWHASEAEATLAETVFLPMRRLEEERREVWTPHVPAEMRGVERSGELARMLPVEAVNLGHPKLRFLWHARRAERALLSYRVEGLEVERTLVERESEEAVEQRRPRPQRGPIIAVMDTSGSMHGLPERVGKALVLEALRTAHAEKRRCFLYTYSGPGQVLEHELSLTEEGVGRLLSFLGQSFGGGNDEASVMARVVQRLEEKDWRRADVLFVSDGEWPAPPHLSQMVEKAREAGTRFHGVQIGNRGRTGLHAICEPVHVFQDWAAAGGW
>NZ_CP012109.1|WP_002634052.1|8931221_8934203_+|DEAD/DEAH-box-helicase
MPLVFLPDTETPFLWGTELLPRSLSGLSRAGARAAASLVTPEGLRECDGRGLPLAATVERLAVARSSDAAAFPGSIALWTLASKLALELVARERVVPALLRRGGRTEARWGAALSAPEDASRVAALAKSLPPSAHAVPVGPERGGTVWAPDALLRAFLDATVDAFLRAARGSSSFPSRARPRPPSSWEARWNEALTSERRDFVPEGFAERSVVDELTRWSEPALGARDRLRACFRLEPPKADHKPFALSFHLQAPDDPSLLVPATDVWKTRGRSLEKLGRAFRDPQESLLEALGRASRLFPPLALVLESPRPQALLLEPAAAWTFLAEGAHVLSDAGFGVIVPGELTTSGRRRLRLRMRVGASSKAVGVVDGASGLGLDALLRVDWDAVLGDQPLSAQELALLAQRKAPLVRFHGEWVAVDPQELDAIQRHLAQGPGRMALSEAVRVSLLGETRHGELPVTVLATGELEARLRHLRAGGATAQGAPHALRASLRPYQARGLHWLDTLASLGLGACLADDMGLGKTVQMLAFLLQRRERAPREASPTLLVAPTSVVGNWEREIARFAPTLRVTPHYGAERARTVRGFPRGPGALVLTTYGLLRRDAALLSRVNWDAVVLDEAQNIKNAASATARAARSLRASQRFALTGTPVENRLAELWSILEFANPGLLGPLETFRREVALPIERHGSQEAADRLRRIVGPFVLRRLKSDPTIIADLPAKNEMKVVCTLTREQATLYKAVVDEELRRIEASDGMARRGRVLALLLYTKQIANHPAQYLGEAGPLPGRSGKLARVMEMLEEALSVGDKALVFTQFREMGDKLVAHLLEHLGHEVLFLHGGTSRKARDEMVRRFQEETHGPRVFVLSVKAGGTGLNLTAASHVFHYDRWWNPAVEDQATDRAYRIGQKRAVQVHKLVCAGTVEEKIDRLLEQKRQLAEKVVGAGEHWVTELGTSALRELFSLSEGAVVDEGEDERPRGSPTRRSGRARSKAVAS
>NZ_CP012109.1|WP_002634051.1|8934199_8935132_+|SWIM-zinc-finger-family-protein
MSPRDFWDWPSTPKRPPPAHGIKVKKAGATWWGERWLEALESVLEGDSGRLSRGRTYARAGRTHDLVIQRGKVSARVTGSRPTPYAVSLSLNHFDAGVWKKAVAGMAGRAQYAAELLAGTMPQDIDAVFRAAGVSLFPRSREELVTNCTCPDWGDPCKHVAATHYVLGEALDRDPFLLFELRGWTKARVLDALRTARGGEPPGVVKRKRRAQDAEGVAPEVPGVKPGKMTQGRYDEPRVPLPAMSFSFDAPVVPGAVLRQLGAPASWGAEDAPGELLAPRVRAAAEVARRIALRETDSGEDAPPARKPRR
>NZ_CP012109.1|WP_144429675.1|8935289_8936051_-|hypothetical-protein
MSTSSASRMEQLISAITRYHPTFRGEIEGYTSEEIEKHQAIVGRPLPGPYVDFLRSMGRRMGELSFQEGDFRMEALTRYYAHVGASRDSALVIGISRYETGEQPIELDEDEDTGEFVLTAYPPPERPREFSESIQIFDLVEPTLHEALFAKAYLKYRWPQFSHQRTLFFAAKSPSEVERGAAQLTPFGFEQHAESTVVRYFERHDATAIMSPNPGESVRLSLSMRDEVRLQELVEGLSKRLAATPSPPSREGL
>NZ_CP012109.1|WP_044889970.1|8936097_8936862_-|SMI1/KNR4-family-protein
MSPPASAPAIPSVVQAITQYHPTFANEVRGCTPSEVARIEAAVGRPLPASYVDFLRTMGRSTGPLQLLQDSDVFSFEPVVAYHDNKDIPKAPARYLLFGLAEDDPYFDIYLDSGSQEPQVIRFPTPESAKDFPAAIQQCDWLAPSLSEFIFAKAFFQFHVSQFPQRTSLAESPEARSRLDQEQAAAPLTKLGFTRHPLSSDAVAYYERPTSLVVASKSHPSDAPLLFTVAAYDRKELLKIEDVLAQQLQLITPG
>NZ_CP012109.1|WP_082282954.1|8936863_8937808_-|DUF4150-domain-containing-protein
MALNAGDGQTQSCPAPDVCKTPSPGGPVPVPYINVARDSDLAKGTKAVSIEGHPVALSNSNLSTSVGDEAGTAGGGIISSKTKGKLTWATFSPDVKFEGKNVVRFLDICLHNGNKVNTGGNAATGKPSVGLTYGADAKCPICGNPEGHELKSDERSEKAAQRLYKKCPPHKSVRGQKKGYMAGVLRCRHPETGRTVLLQMHSGKTSISGFVMKPKPSAPIAWKSRGGQKIQLTRSPDFKGPPEESCAAQKLVSEATRLGLEIKSMTEFWVGPSNEEGRSDGHHYESCPTCKKVLPALLCPQPGNGTTVVELKDS
>NZ_CP012109.1|WP_002634047.1|8937831_8938908_-|hypothetical-protein
MTPADMGSQPLDILAIGLCTPLGLTARATQAEIAAGTARMFQTDVSDPWGEPVRASMLEPLGAALPRTERMAAMAITALQDCMRDVPSPGPHPLPLLPLVLGLSAPEEGAPLDVEELVRAIEEAGVHWHIQLAPRGALALGRAAFFHALCRASALLDTLRCPRVLVGAVDSFCDRESLQRLAAQGRTLGGPHRDGIIPGEGAGFVLVSKAGGMETRAHTARGRVLGCALATDERHFLQPQPPLGHGLTEVFQRLRVHPVTGTRRADFFLSCQSTEAFWGREFTQAYLRNIELLPEPLTGEVIAGSLGDPGAAAGIIQTGMALHARGNWGEARPGVWRTLVYGCSDRGHVGACMVEVQT

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Crispr_ID: NZ_CP012109_30

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_30

8959558-8959814

Unclear

NA:I-A,I-B,II-B

Consensus_repeat	Method
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	CRISPRCasFinder
ACATGCTCAACGCCTCTCGGCATCACCGCGAGCGGGAC	PILER-CR

3 spacers

cas2,cas1,cas5,cas7,cas8b3,cas3,cas6

The CRISPR arrays of NZ_CP012109_30

>merge|NZ_CP012109|30|8959558-8959814|CRISPRCasFinder,PILER-CR
CGTCCCGCTCGCCGAGATGCCGAGAGGCGTTGAGCATGTGTCGAGGAAGTCATCCTCGCGCCACCCGACCTAATCCCGCTCGCGATGATGCCGAGAGGCGTTGAGCACCGCTGTTGGCTCGCTTCAGGCGAGCCGCCGCCGTCAGCCCCGTTCGCGGTGATGCCGAGAGGCGTTGAACATGTGTAGGTGGTGTTCATCTCCAGCAAATCCGGGTCTGGGATGTTTCGCTCGCCGTGATGCCTGGAGCCTTAGCGTTG

>NZ_CP012109|30|23|8959558-8959814|CRISPRCasFinder
CGTCCCGCTCGCCGAGATGCCGAGAGGCGTTGAGCAT	GTGTCGAGGAAGTCATCCTCGCGCCACCCGACCT
AATCCCGCTCGCGATGATGCCGAGAGGCGTTGAGCAC	CGCTGTTGGCTCGCTTCAGGCGAGCCGCCGCCGTC
AGCCCCGTTCGCGGTGATGCCGAGAGGCGTTGAACAT	GTGTAGGTGGTGTTCATCTCCAGCAAATCCGGGTCTGGGA
TGTTTCGCTCGCCGTGATGCCTGGAGCCTTAGCGTTG

>NZ_CP012109|30|7|8959559-8959739|PILER-CR
GTCCCGCTCGCCGAGATGCCGAGAGGCGTTGAGCATGT	GTCGAGGAAGTCATCCTCGCGCCACCCGACCTA
ATCCCGCTCGCGATGATGCCGAGAGGCGTTGAGCACCG	CTGTTGGCTCGCTTCAGGCGAGCCGCCGCCGTCAGCC
CCGTTCGCGGTGATGCCGAGAGGCGTTGAACATGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002634028.1\|8963619_8964162_+\|TIGR02265-family-protein	unknown	unknown	gnl\|CDD\|131318
NZ_CP012109.1\|WP_002634033.1\|8955247_8956909_+\|type-I-MYXAN-CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274899
NZ_CP012109.1\|WP_002634029.1\|8962726_8963386_-\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187554
NZ_CP012109.1\|WP_002634024.1\|8968535_8969405_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|225136
NZ_CP012109.1\|WP_193409823.1\|8965008_8968539_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012109.1\|WP_002634036.1\|8952015_8953632_+\|type-I-MYXAN-CRISPR-associated-Cas8a1/Cmx1	cas8b3	cd09713_cas8b3_CAS-I-B	gnl\|CDD\|132524
NZ_CP012109.1\|WP_021781219.1\|8961472_8962690_+\|Beta-mannanase-ManB,-contains-ChW-repeat-protein	unknown	unknown	gnl\|CDD\|366944
NZ_CP012109.1\|WP_002634022.1\|8972167_8972995_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP012109.1\|WP_002634035.1\|8953656_8954565_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09650_cas7_CAS-I	gnl\|CDD\|273846
NZ_CP012109.1\|WP_002634027.1\|8964198_8964870_+\|exopolysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|226442
NZ_CP012109.1\|WP_002634034.1\|8954561_8955206_+\|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS	cas5	cd09688_cas5_CAS-I-B	gnl\|CDD\|131635
NZ_CP012109.1\|WP_082282888.1\|8949182_8949794_+\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	cas6	cd09703_cas6_CAS-I:CAS-III	gnl\|CDD\|274308
NZ_CP012109.1\|WP_002634040.1\|8946017_8946941_-\|DUF2381-family-protein	unknown	unknown	gnl\|CDD\|131321
NZ_CP012109.1\|WP_021781220.1\|8959954_8960680_-\|double-CXXCG-motif-protein	unknown	unknown	gnl\|CDD\|370549
NZ_CP012109.1\|WP_002634039.1\|8947287_8948757_+\|SAVED-domain-containing-protein	unknown	unknown	gnl\|CDD\|380122
NZ_CP012109.1\|WP_002634032.1\|8956912_8957206_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NZ_CP012109.1\|WP_002634037.1\|8949790_8952031_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP012109.1\|WP_044889968.1\|8960686_8961352_-\|TIGR02269-family-lipoprotein	unknown	unknown	gnl\|CDD\|370548
NZ_CP012109.1\|WP_002634023.1\|8969655_8972121_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002634041.1\|8944134_8945988_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002634028.1\|8963619_8964162_+\|TIGR02265-family-protein	gnl\|CDD\|131318	TIGR02265, Mxa_TIGR02265, Myxococcales-restricted protein, TIGR02265 family. This family consists of a set of at least 17 paralogous proteins in Myxococcus xanthus DK 1622. Members are about 200 amino acids in length. No other homologs are known; the function is unknown.	5.18914e-60
NZ_CP012109.1\|WP_002634033.1\|8955247_8956909_+\|type-I-MYXAN-CRISPR-associated-endonuclease-Cas4/Cas1	gnl\|CDD\|274899	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN. Members of this protein are the Cas1 endonuclease, or Cas1 domain in Cas4/Cas1 fusion proteins, of the MYXAN subtype of CRISPR/Cas systems. These systems typically feature repeats and spacers each about 36 base pairs in length. Species with this type of CRISPR system include Myxococcus xanthus, Cyanothece sp., Leptospira interrogans, Sorangium cellulosum, Anabaena variabilis ATCC 29413, etc.	0
NZ_CP012109.1\|WP_002634029.1\|8962726_8963386_-\|NAD(P)H-binding-protein	gnl\|CDD\|187554	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5. This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.19639e-26
NZ_CP012109.1\|WP_002634024.1\|8968535_8969405_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|225136	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].	3.66076e-20
NZ_CP012109.1\|WP_193409823.1\|8965008_8968539_+\|AAA-family-ATPase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.97491e-64
NZ_CP012109.1\|WP_002634036.1\|8952015_8953632_+\|type-I-MYXAN-CRISPR-associated-Cas8a1/Cmx1	gnl\|CDD\|132524	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype. Members of this family are found among cas (CRISPR-Associated) genes close to CRISPR repeats in Leptospira interrogans (a spirochete), Myxococcus xanthus (a delta-proteobacterium), and Lyngbya sp. PCC 8106 (a cyanobacterium). It is found with other cas genes in Anabaena variabilis ATCC 29413. In Lyngbya sp., the protein is split into two tandem genes. This model corresponds to the N-terminal region or upstream gene; the C-terminal region is described by TIGR03486. CRISPR/cas systems are associated with prokaryotic acquired resistance to phage and other exogenous DNA.	5.49032e-119
NZ_CP012109.1\|WP_021781219.1\|8961472_8962690_+\|Beta-mannanase-ManB,-contains-ChW-repeat-protein	gnl\|CDD\|366944	pfam02156, Glyco_hydro_26, Glycosyl hydrolase family 26.	2.88042e-25
NZ_CP012109.1\|WP_002634022.1\|8972167_8972995_-\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	8.19894e-28
NZ_CP012109.1\|WP_002634035.1\|8953656_8954565_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|273846	TIGR01875, CRISPR-associated_protein_Cas7/Cst2/DevR, CRISPR-associated autoregulator DevR family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This model represents one such family, represented by MJ0381 of Methanococcus jannaschii. This family includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development. [Regulatory functions, DNA interactions, , ].	2.26697e-61
NZ_CP012109.1\|WP_002634027.1\|8964198_8964870_+\|exopolysaccharide-biosynthesis-protein	gnl\|CDD\|226442	COG3932, COG3932, Uncharacterized ABC-type transport system, permease components [General function prediction only].	1.25049e-50
NZ_CP012109.1\|WP_002634034.1\|8954561_8955206_+\|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS	gnl\|CDD\|131635	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN. This model represents DevS of Myxococcus xanthus and related proteins of Leptospira interrogans and Gemmata obscuriglobus. This protein is encoded in a cluster of CRISPR-associated (cas) genes, and in the special case of Myxococcus xanthus has taken on a role in the control of fruiting body development. CRISPRs are clustered, regularly interspaced short palidromic repeats. This protein family is related to models TIGR01868, TIGR01895, and TIGR01876.	3.34155e-91
NZ_CP012109.1\|WP_082282888.1\|8949182_8949794_+\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	gnl\|CDD\|274308	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN. Members of this protein family resemble the Cas6 proteins described by TIGR01877 in having a C-terminal motif GXGXXXXXGXG, where the single X of each GXG is hydrophobic and the spacer XXXXX has at least one Lys or Arg. Examples are found in cas gene operons of CRISPR regions in Anabaena variabilis ATCC 29413, Leptospira interrogans, Gemmata obscuriglobus UQM 2246, and twice in Myxococcus xanthus DK 1622. Oddly, an orphan member is found in Thiobacillus denitrificans ATCC 25259, whose genome does not seem to contain other evidence of CRISPR repeats or cas genes.	4.88721e-86
NZ_CP012109.1\|WP_002634040.1\|8946017_8946941_-\|DUF2381-family-protein	gnl\|CDD\|131321	TIGR02268, TIGR02268, Myxococcus xanthus paralogous family TIGR02268. This family consists of at least 8 paralogs in Myxococcus xanthus, a member of the Deltaproteobacteria. The function is unknown.	8.15424e-72
NZ_CP012109.1\|WP_021781220.1\|8959954_8960680_-\|double-CXXCG-motif-protein	gnl\|CDD\|370549	pfam09535, Gmx_para_CXXCG, Protein of unknown function (Gmx_para_CXXCG). This entry consists of at least 10 paralogous proteins from Myxococcus xanthus and that lack detectable sequence similarity to any other protein family. An imperfectly conserved CXXCG motif, a probable binding site, appears twice in the multiple sequence alignment.	2.05955e-107
NZ_CP012109.1\|WP_002634039.1\|8947287_8948757_+\|SAVED-domain-containing-protein	gnl\|CDD\|380122	pfam18145, SAVED, SMODS-associated and fused to various effectors sensor domain. Predicted to function as a sensor domain, sensing nucleotides or nucleotide derivatives generated by SMODS and other nucleotide synthetase domains. The sensing of ligands by SAVED is predicted to activate effectors deployed by a class of conflict systems which are reliant on the on the production and sensing of the nucleotide second messengers.	2.32625e-28
NZ_CP012109.1\|WP_002634032.1\|8956912_8957206_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	6.46112e-16
NZ_CP012109.1\|WP_002634037.1\|8949790_8952031_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.06589e-38
NZ_CP012109.1\|WP_044889968.1\|8960686_8961352_-\|TIGR02269-family-lipoprotein	gnl\|CDD\|370548	pfam09533, DUF2380, Predicted lipoprotein of unknown function (DUF2380). This family consists of at least 9 paralogs in Myxococcus xanthus, a member of the Deltaproteobacteria. One appears truncated toward the N-terminus; the others are predicted lipoproteins. The function is unknown.	2.77686e-90
NZ_CP012109.1\|WP_002634041.1\|8944134_8945988_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.84675e-51

>NZ_CP012109.1|WP_002634032.1|8956912_8957206_+|CRISPR-associated-endonuclease-Cas2
MAEPRRWYLITYDIRDPRRWRKVYALLKGYGEWLQLSVFRCSLTDRDREKLRWELARRMDAVDTLLVIGRCGGCVERVRAINAKEDWPEEPALFKVL
>NZ_CP012109.1|WP_002634033.1|8955247_8956909_+|type-I-MYXAN-CRISPR-associated-endonuclease-Cas4/Cas1
MSTSVLSPKPANTEPSIRTHALHALAYCERLFYLEEVEELRVADAAIYAGRRLHHQLQEEGERVELELASEALGLHGRVDAVRTREGTLVVHEHKRGRHAPAPEVPGAWPSDRLQVGAYALLVEERFPGVPVECRVRYHQTETTVRFPLDAALRGEVASAVARARLLRASRERPPVTQEERKCAKCSLAPVCLPEEERQVAGEDRPRLFPEDDVRQVLHVATPGTRVGRASEELVVTPPEGEGAPSRQPGRMVSALVAHGAVQVSSQALAYCVENDIGVHWFTSGGRYLGGLGGGTGHVHRRMRQFEALRQESVSLGLARRLVAAKLEGQLRFLLRASRGDADAREVLASAVRDLRALLPKCAEAPSRDVLLGLEGAGAARYFGALPYLQGEDVDPRLRFDGRNRRPPRDRFNAVLGFLYGMVHREVDAAIRSVGLDVAFGFYHQPRGSAGPLGLDVMELFRVPLADMPLVASVNRRTWDVEADFEVTSEHVWLSKAGRAKAIELYERRKRETWKHNVLGYSLSYARLVELEVRLLEKEWTGKPGLFATFRLR
>NZ_CP012109.1|WP_002634034.1|8954561_8955206_+|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS
MIAIELTVPVACWRKGRARELVETEVLPPPATCYGALLSLVGEQDRERHRGCRVTAGLLNAPGISTVLRTFWRTKNLKVAKGNEENAAPDQQQLVIDAHLVVWCDSSEEHASAESLEARVVRAMRAPGTVERAGAWSLGESTHLINDARLLPEGRPPSDCRVFLTASMGGITLPVWVDHVGTRGSRYAVGRLEAVTEAPEVQRLPRIPLVEEAA
>NZ_CP012109.1|WP_002634035.1|8953656_8954565_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MSLHVFAAFVTPLGTAANNRGLTEGNITSLQKLVWNGQVHTTVSAESIRFALRRRLNEQEPCNRTYDDAARANVWKDDAFSAWAAKSKEKTYIDDDLLGFMSAEGAKQEKEKGTAKVRRAVLEVSRAVSLTPWSGDVTFNAASPGATPSAQKKGSNPVPYGTEMHATRYQYGVALTPEALRVPARAATALNQLCALGPVAGNHGRFLFDFSPESVVFRLTQEAAPRILHAFEPSSRAGGVELASLLRKVKSGDVPAKELVLGGHVVEGLSAEEREVLAGAELHTGVVAACRAACKRMEVGKK
>NZ_CP012109.1|WP_002634036.1|8952015_8953632_+|type-I-MYXAN-CRISPR-associated-Cas8a1/Cmx1
MAKAVSPRKKALPAPLSISLYAPGMTPLLRAGAGGLAASLRAILLGATPSASWPSPVSLGPGTATVSPEAIHFDWGGAAPEATLKPLFEASFRVKQGFIDLPGARRPNAPEPPPELAAALHDALKVTFLQHGKSTQGGTRKRITFEVDDQPVVVESQGYASFVHQGAWQNVLEALESGSTVLASWAYPGAAERHIGVRVTKVEYTAQEALCACFALVGCVSFKLPQLRGGAFVALAPTDLVCFARLRSGLTPGRLVDVAVAGASDAVLAAQLAMKLEAKGELGKVLGAAEAVALRQMPWNAQQKIRGAVVRQDTVSEDVLNAYEVAAAALKSKLRVRKPEGKGEAGYFIATSALRAFITENLAAARPWFAGFATATTAEGRFIHDYCGRDNLGALLWDERKGLIAMHPKLKESEQWLVQSVHLALRSRFRGIYEDTKESPPATRSNRLKGERERLRLSFAGAKTPEQVRAALADLWSRAGPNRELQEHWKDILPLLGPERWRDARDLSLVALASYQGRGGDTAELEDAEASSDASELS
>NZ_CP012109.1|WP_002634037.1|8949790_8952031_+|CRISPR-associated-helicase/endonuclease-Cas3
MKRLLAKTTATPDRPEGEATLLGHTALVLSSARRLLEHRGRASLLAAGLAPTWEPRLRRIALLAAALHDLGKCSEHFQSMLRRKRTEPQLVRHEALSLWLCWPGQPLSSWLLGGMDELDLCLALVSAAAHHRKFQSDAFAPDGTGAGLSLELWVHHEDFARTLKRIAEELQLSAPPVFTAPIVLRATRKEHPRDQLQSWQDDFERVVPVDSPDARLLSVCKALVLAADVAGSALPRSGEKQDWVDRQLTAPHPAEALRTVVERRLGGRLPRPFQDAVARSSAPVTLVRAGCGSGKTVAAYLWAVTRHPGRPLWLTYPTMGTATEGFRDYLHGADVDARLQHSRAEVDFDIFGLRDGADPGRGSRDQDRLDALRSWGVDAMSCTADTVLGLVQSQRQGLYAWPSLCSACVVFDEIHAYDDRLFGCLLRFLEALPGLPVLLMTASLPVARLGALRDLCERVHGRSLAVVDGPEDLETLPRYQRLDVEDPWPLVTQCLRDDGKVLWVSNTVDRCMRAAEAASSRGAHALLYHSRFRYEDRVHRHGAVVAAFAKSGCSVFASTTQVAEMSLDLSADLLVTDLAPIPALIQRLGRLNRRSTPEAPERVRPFVVLPFDGAPYSAPALRDARAWLVRLGMGELCQRDLVSAWEAHGVTEAPQRYSSTWLDGRFDTWPAPVRDGSPSLTVLLEEDARKVLAGEVRAHEVTLPMNLPPESLKWRGWPRPGRLPYPIPPAGTLDYDELRGARWRKP
>NZ_CP012109.1|WP_082282888.1|8949182_8949794_+|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6
MAFVDLLFPVQGGPVPLDHGYLLFAALSRHIPALHECADMGVFSLRGVSNTRELLYLGRGTLRLRCPVDAVGTLLPLVSAPLEVAGRRLSLGAPSLYALEPVPVLSARLVTFKHAMDEASFVVAVTRALETFGVEASLKVGRRRIVCIAGKKVVGFALELHGLSAEHSLRVQERGLGGRRHMGCGLFLPPGRVARAQSRGKAA
>NZ_CP012109.1|WP_002634039.1|8947287_8948757_+|SAVED-domain-containing-protein
MGEQSASRLEGDRYQHLLSWYELLRLLEADSPFESGHVEHPTAGSADDVTLHARPGAGVSSRYMQVKWHVDHRDTYSLSGLVTPPREGNSLLRKLLESWLALRPLGPVEIWLLSNWASAEDLGRYLHGRDHCFTDAFFVQPPRGALKKHWAEWERQLGAPAETLRAFCKDLRLRLVAGSITDVEEQVDDRMGRLGLRTGRQPRAVAVDGLREWVELGGGKKRVTPESLREVIRAWGLLASREAVPTVSLWIHGWARRAWDVPPTEELDWTAYFDRDTRTLPSEAVWRETLLPSLLAVRQRLSRRPDGALIDLRGKLPLSTVLAVGFQFPEVGGYRFRVEQPTRGETFLWRSDAKPSGRGLRVTRHDVNADAAELLVMFQMTGDARADVDRFLAERPGHFRAVLYLEPEGGPHDGAVGSAADAVEFAVQAREQLRRERNALRTTVTHLILYAPAACCLFLGQRLNAVGPVVAYERTGTGGYAPALTLQTG
>NZ_CP012109.1|WP_002634040.1|8946017_8946941_-|DUF2381-family-protein
MFPPGSLLMTAVVLLLGTAALAQTPDAKRWRRIERTVDLSAGTGEPIQRLRVAPGVVTTVLLDSDAVLEGEPHEPLQGLFHRLDFAGKHLLLKPAVVMPASGVPPLVLRFTDEAAPRRLVLELSTEASVVDAVVEVRRRPATVEQLEAELVALRERNAVLEARLASARRTVPQQGLVGAILSDAIASSGVVVHWLEDKASETGLKVHRLRSYRSGAWMAFAVRLENPRSEAPWQPGIARLIHLDPSGHPTGETLEVPLLMQEPRLLPGQSAAAVIEWSAPVSPPPAYALELWDTGRRRGARWARLTP
>NZ_CP012109.1|WP_002634041.1|8944134_8945988_-|serine/threonine-protein-kinase
MRLESTSSSPRPRVLSTQALPVGTRLDRWSVARRIGGGGNGTVYEVRSRPGGRSYALKLAHAPSDLRFQREARALRLLRHPGVVRLRATGIWHTGTAAYPYLVLEYVRGSTLYDWSRARNPTARHVASLLAQSAWALDAAHRRRVLHRDFKGDNLRIRDDGRLVVLDWGASWHPEASPLTSATRLPPGTGPYRSPQALLWSMQAPRQAAPSEHYPYTVADDLYAMGVTFHRLVVEQYPPLVLQEPRPPLASATLRVLNPRVPEPLARWIGELLAFTPEARPASAGSLARDVHEALARAGPAWDAPLFDWYEGASTATRTTQEENGGGAVAPGEEAALHSARPLRESRVQLHREKRWRRRRVRSEVEAQCTTESAGPSAQRHVSRRIRIAGALSLVVCIAGALAQVGIPPGNTAALPAQQLARTEGPADTGLPATAHPFPIAEFPWPADAMSTTEPHARCATRLHHYLLAAFSAASLNACSGPQVRPGPEKCPVEALESMRRLELPIGVGGFIQLDLQQPDDSDQTNYSIVVSDGPITSRLDETLGHLPTNTLFYGRIWTGGERIQGRYTRVRTPDGSEYPVCFVLGNATGMPKDQGSRPGYTRVHPWSNAMAVDRFP
>NZ_CP012109.1|WP_021781220.1|8959954_8960680_-|double-CXXCG-motif-protein
MTRYYWLVEDKAATARHAGDINAAHRWKLPGLASCPGCGATWAGAGHYYPAVDLSALPEQASFLKARPEPFSEYARLRELVRPLAPPHVPLPPGTRFGPLEGTARGDLGPFTWIGNALLLMRQDALEQLQMKDVYGFIGGWASLRFRQKSPPAYFEPQLQPHGRLHPDCLPRDATPPCGTCGWVDLSRPEEPVLDATAIPPNLDIFRLGNFATMIVSTERFMNAVLQSKLKGIRFLELAMR
>NZ_CP012109.1|WP_044889968.1|8960686_8961352_-|TIGR02269-family-lipoprotein
MGTRLLLRLLLAVFIQACATTESSRAQTGADASTECHPSPEAPCVNLLCIGDACGFYRCDNDLRPFQLARFPPARPPAAAAAPGAGPRRNWGPGQQLPRGAVMVFPNWNGAPERIIPPSHQLPAGRWEKHHIFPQARDLAEWFETQGVKIHHYTMPIPRDLHQRIHRGGERGGAWNQAWREFMEARPNARPEDIYKHAGQLIYRFQLLGGPIQPYYSRPGA
>NZ_CP012109.1|WP_021781219.1|8961472_8962690_+|Beta-mannanase-ManB,-contains-ChW-repeat-protein
MHTSSIAASLRFSNPLRRVILGAAVCVTALLLNLSPTAAQAQVSRTLSTPFPSPQARKVFDLLVTLENNSRNGVSKQTIMGQHCEAQKERYAGEYWVRVGEIAGRRPGFVEFDFGPGNYGPTYQAPYVDTSVGFARDRFLFGEGIVGFSFHQSYPGASVKSWENNFRQPWMDYNWFGRVINWQANTAEYRALLSDLSFAADKLAILKQLNVPVLYRPFHEMNKRPNASPFWWSNQDPAQYRQLWVIMHDYLVRTRGLDNLIFVWSPYEWDGTYGGDPWNYYPGDDRVDVVAVDIYHGNPYFPGQFYTDLGARYRKPRMLAETDKLPVRWGDSRYATVSEIDARPWVLWSVWGDTLLYNVGTTTPNDWNVSNNHKAIRDSYSYHDGSIWRVLTGGANPTYNWGSLR
>NZ_CP012109.1|WP_002634029.1|8962726_8963386_-|NAD(P)H-binding-protein
MNMSPRHLFVAGATGATGRNVMRQAIARGVPATAHLRPKSASSELAQAWPHKAVVEIARVDELVEQLRGAGVTTVLQLIGTMRKRFGSGDTYETSDIGTTRNLVHAAKSLGVDHLVLLSSVGAGRPVGAYLKAKAEAERLVRESGIPWTIVRPPAFEGEYHHISPVLRALTRLPLLRGMRPIHLDQLAAVLLRVAERRAPLNQVLEGDTLWAEVAAAGA
>NZ_CP012109.1|WP_002634028.1|8963619_8964162_+|TIGR02265-family-protein
MEKPEPLVFQQSFQGLIRALGDDLDDTCAGRLRDAGLDTRGSLALAYPLEVWVAALKVAAATLAPESPLDEAAAVVGKRFVEGFSSTLIGNALLGTVRLLGPQRMLARMTRNLRTGTNYLETHMEQLGPTRYALTCRPVVVAGFYVGLFLAGLEASGARNPAVQIVRREGEEAVYDIAWG
>NZ_CP012109.1|WP_002634027.1|8964198_8964870_+|exopolysaccharide-biosynthesis-protein
MSTPSSNPSSSSASFSDTQVQLSATLRALSSRLPESLTVRELMQACGEQGLLLFCCILTFPFLLPVSIPGVSTVFGLLIVLIGVGVTFNRTPWLPRKLLDKTLLRTNLAPALDKGAEVFTKYVDRLSKPRLLVLTHGSSTNRFNGFMLFFAGVLLMMPFGLIPFSNTLPALAALFFAIGILQRDGYFILMGHGMTVGTLTYFTVLIYGAVQGGRSLASVFGGG
>NZ_CP012109.1|WP_193409823.1|8965008_8968539_+|AAA-family-ATPase
MRQYPLETQPRLEDAARRHAEGEVVGGRYRILDFLGRGGAGTVWRAQDLLAGPVAVKRLHQTLEDLARLPEGENTPSSMARHELALSLAHEFQTLASVRHPHVISVLDYGFDAEHRPYLAMDLLEDAQHLVKAGTGQPLRVQVGLLVQTLLALAYLHRRGIIHRDLKPANVLVAHGQVKVLDFGLAVGREHVHRAQPGGTPGYLAPELFEDQPPSEVTDLFSVGAMASQMMFGRLPHAGQVPAPPDFPPELKAALERLVSPDPRERPRGADAVIAELCAATGEPVPPESAATRESFLQAARYVGRVEELSRLSAVLEAAMVGRGGAWLVGGESGVGKSRLLEELRALALVKGAVVLRGQGVAAGGSPYQEWRPVLRWLSILTPLDEREASVLKPLVPDIESLLGHPVADPAEVGADMVQARLLQVVEDVFARLTQPVVVVLEDLHWAGGESLHLLARLATRAPTLSLLLLGSFRDDEAPALPSALPDLSLLRLPRLGAREVSLLSESMMGAPGSRPHLVELLLRETEGNPFFLVEVVRALAEEAGGLDRLGDMALPERVFAGGVRRLVQRRLEKVPVAARELLRVAAIVGRQVDVPLLRHAVPGVDVEGWLTDCEAAAVLDVADDHWRFAHDKLREGVLDELPADARPELHRRAALAMEAAHGQRPEWASALAYHWGMAGDALREASHARRAGEDALRVGACQEALSFLTRALERVSGAGGDAMSLGHLEALLAETRFQLGELQAFRSHAERALKHFGWPVPTTRMGWALGTVGQGVLRLAQSSRPEDYDEETEDRRRVRRVAGRLLMRLLDAFIYAHQALPVLWSGLRALNLCEPAGASPELARGYTSMAVVVGTLPIRAVAETWVRRALEVAESVGSPADLAFVLCRNAVYGAYVARWAEAEAWLERAIGIVDSVGDLRLAEECRALLTVVSCYQGKFARGLPLMAWLKHSARRRGALQTQHWALHYQAHIHLRLGALDKARAALEETLAWTESQGGQTDRIIVEGTLALLRLREGDAAGAREAAEQALAKMSAGKPVAHFVYFGVVTVAEVLLTLWEQGADASLVASAKAARREADVFARVFPFGEAAARLWRGSEAWLEGDATRAFESWRRCITVASKKGQAFEEAHARLSLARHLPSEDPARWGHQQRAVELFTRLGMRDELARAEAIASR
>NZ_CP012109.1|WP_002634024.1|8968535_8969405_+|class-I-SAM-dependent-methyltransferase
MNGVQARDVASLACPACGGTLVFHGREAHGCLREGWLRCGGCGEAWRVERGMARLYREDTVRGTDRLMRVIYDGLPVLHDPLTTLLTPLFQSVSEARMRAGYMRRLELASLVPHEDGSPVRVLEVGVGSGANLPLIRDGLPSGLDVEVWGVDLSEGMLKHCRRRLKAGDYSGVRLMMADAHTLPFPDASFDRVLHVGGIGGYREPAQALAEMARVAKPGTPLVVVDEQMDPAFRPSLFQRAAFRAITFYSSDPHCPRELLPTGAVDVREEQVAPFYYCLSFRMPGAHAG
>NZ_CP012109.1|WP_002634023.1|8969655_8972121_+|hypothetical-protein
MSKPEFELHLGGGLYLDSQGNIRQGAPPPKSVPVFEVPFQLPLEPSKLKDTVAKVEKALKSVTKDPEVIAMFARFGYASKLLDVLSAVTKVAAMIAPVLSVAAFAYDILKLFGLFKSTPSSFEKKVMEAVAEITDTQRVIFAHITETHVTGAHSRISTWVAGVMDYFTSLQNSHPSLQDLKDEYNKLESTQEERSGDVQWLLTDLTWRILFPRADYSRVWGFMSDLVHTMPAAAGQPPVKTPFPANNSLVFDHRLMTPLVLFASEAYLTAIRAIRPEHRVIGTFHNKLLLMADALERCAQQMRSDGLGRTVYAPSHFTRVRASDVIPGRPFTGAPVISPRCSRWPVGALDLRRHSDSYFNTFLNDLSLAETRGNVTSSRFGGLDFRWIPPAVLGEHQEPWGWEILNPDECAAAANAQSEADYAELLATSGYVELLRVVALLRNEATEPSSSMTASQKRMSLFRAPLPAESVAIKSGGSGWVKETVGTGKRESQNWGATLALGTQPLNRAYPLKYNIVLRTLVAGASYEDYYRTSYVPEPDRPSALALAIDTVPGVLLDEFYIFKNVESPREAVGLHDRQRVMTAATFDWWIQVATPFSLDNDFLETAVELGTLGFIAPVGGGSAGDRLPDGTPGTGASVGMASWLPGGLPNDVIGTHTPFIGWKPGVAELDGQRREPKVVPVTVKYRIDWLGDDLRMEFRNVPQDRNYVVHVVLEEFLPRTGKWLHTAIPVPINGCLTFIPQRFFEEEAKAVANAGQAIAVFYKRQFVDVAVGRPPPDPKFDPIRPGDLVSLNQVVSLGQSLERLGFTLEMQERDGGPGEG
>NZ_CP012109.1|WP_002634022.1|8972167_8972995_-|SDR-family-oxidoreductase
MNEGGGDTGQEWAVILGASSGTGAGIAEAVAHKPGLNVFGVHRGRYPDTASQLEQQVRSAGRRVVMWQADASTPEAAEAGVAALREVAGLRSVKLFVHSIAGASVGHFLSAGEDRLHARRIRRTFDTMAHSFVYWAQALADADLLAPESRLLGLQNPLDETHLGNTGLISASKAALEMYVRYLAMELGPRGHRVNLLKFGTVMTPALKHVYSPEALARLEAAHAKMNPAGRMSTVEEVARFVTVLAGEEAGWFNGATIDFTGGMTLRLLDLVLNP

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Crispr_ID: NZ_CP012109_29

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_29

8957457-8959461

Unclear

I-A,I-B,II-B

Consensus_repeat	Method
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	CRISPRCasFinder
GTGCTCAACGCCTCTCGGCATCACGGCGAGCGGGAC	PILER-CR
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	CRT
GTGCTCAACGCCTCTCGGCATCACGGCGCGCGGGAC	PILER-CR

27 spacers

cas2,cas1,cas5,cas7,cas8b3,cas3,cas6

The CRISPR arrays of NZ_CP012109_29

>merge|NZ_CP012109|29|8957457-8959461|CRISPRCasFinder,PILER-CR,CRT,PILER-CR
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACTTTTCCCGCTCGGCCACGCCGGGCAGGGCGAGCGTGGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACAAACACTGGCTGGGCGTGCTCGCGCATGCGCCCTCGGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACACCAACCTTCGCCGTGCGCTGCATGAAGAACGGAAGTGGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACCCGGGCCGAATGGAAACGCTGGTGCGAAAGGCCGGGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACTCGAACTCGGCGGCGAAAAACGGGACGCGGGTGGTCGGGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACATTGCCCACGCATGCGAATTCAGAAACCTTCTTAGGGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACTCGTTGAGCGCGAGGGGCAGGCCGTAGAGCTTGTTGAGGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACAACATGAACGAGACGGTGTTTTTCTCTGGTGGGCACCCCAGGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACACGCACTCGTGCGCATGGCGTCGCTGTACGGGATCGGGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACCTGCTACTCCGCCCGACTCGGGTCGTCCGGGGCCGGTCCCGCTCGCCGTGATGCCGAGATGCGTTGAGCACGGACCCATCGAGGGGGTGGGTGGGGAATGGGGGGTGGGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACTTCAGTTGGGCCACCTTGCCTGAATCTGGATACGAGGGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACACCGTGCAGTCGATTGACTCCGACCTCATCGACGCCGGAGGGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACGCTTGCAAAATGACCGTACGTGAGCGGCGGGCACCCAAGTCCCGCGCGCCGTGATGCCGAGATGCGTTGAGCACGGCACGCCGCTGGCGGCCTCCTTGGGGGTCGGCGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACATCCAGGGCGTGGTGACGGCAGCGGCCAACGCAGGCGTGGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACATTCGGAGCAAGTACGACGCCTTCGAGCGCGCCTTTTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCGCAAGGGCGTCCAGGCGTGGATTCCCTTCACGAAGCCGGTCCCGCTCGCCGTGATGCTGATCGGCGTTGAGCACACGTAGCGAAGGCGGCGACCGTTCTCTGGCCTCGTCCCGCGCGCCGTGATGCCGAGAGGCGTTGAGCACTCGACGTGCCCGTCGGCGTAGTGGAGGCGGTAGTCCCGCGCGCCGTGATGCCGAGAGGCGTTGGGCACCTGACTGTCGCCACCATGCCGGTGGACGTGACGGGAAGTCCCGCGCGCCGTGATGCCGAGAGGCGTTGAGCACCGGAACGAATCTTCTGCCCCAGCTTCTCGTCCCACCGCTGGTCCCGCGCGCCGTGATGCCGAGAGGCGTTGAGCACCCATCCTTGATGGTCATCGCGCCAATGGCCATGAGTCCCACTCGCCGTGATGCCGAGAGGCGTTGAGCACTTCGCCGACACCAAGCGCCCTCCCATGGGCAGGGGGCCGGGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACATGTCGGACATGGCCGTGACCTCGTAGAGCATGTCCCGGAGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACCTGCACGTCGGGTCTACCGCCGCCGTCACGGTGCCGGTCCCGCTCGCGGTGATGCCGAGAGGCGTTGAACCCTACCAGTCGAGGACGCCCTTTGCGATTGCTACCTCTGGCCCCGCTCGCAATGATGCCGAGAGGCGTTGAGAACG

>NZ_CP012109|29|22|8957457-8959461|CRISPRCasFinder
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TTTTCCCGCTCGGCCACGCCGGGCAGGGCGAGCGT
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	AAACACTGGCTGGGCGTGCTCGCGCATGCGCCCTC
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ACCAACCTTCGCCGTGCGCTGCATGAAGAACGGAAGT
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	CCGGGCCGAATGGAAACGCTGGTGCGAAAGGCCG
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TCGAACTCGGCGGCGAAAAACGGGACGCGGGTGGTCG
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ATTGCCCACGCATGCGAATTCAGAAACCTTCTTAG
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TCGTTGAGCGCGAGGGGCAGGCCGTAGAGCTTGTTGA
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	AACATGAACGAGACGGTGTTTTTCTCTGGTGGGCACCCCA
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ACGCACTCGTGCGCATGGCGTCGCTGTACGGGATCG
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	CTGCTACTCCGCCCGACTCGGGTCGTCCGGGGCC
GGTCCCGCTCGCCGTGATGCCGAGATGCGTTGAGCAC	GGACCCATCGAGGGGGTGGGTGGGGAATGGGGGGTG
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TTCAGTTGGGCCACCTTGCCTGAATCTGGATACGAG
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ACCGTGCAGTCGATTGACTCCGACCTCATCGACGCCGGAG
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	GCTTGCAAAATGACCGTACGTGAGCGGCGGGCACCCA
AGTCCCGCGCGCCGTGATGCCGAGATGCGTTGAGCAC	GGCACGCCGCTGGCGGCCTCCTTGGGGGTCGG
CGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ATCCAGGGCGTGGTGACGGCAGCGGCCAACGCAGGCGT
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ATTCGGAGCAAGTACGACGCCTTCGAGCGCGCCT
TTTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCGC	AAGGGCGTCCAGGCGTGGATTCCCTTCACGAAGCC
GGTCCCGCTCGCCGTGATGCTGATCGGCGTTGAGCAC	ACGTAGCGAAGGCGGCGACCGTTCTCTGGCCT
CGTCCCGCGCGCCGTGATGCCGAGAGGCGTTGAGCAC	TCGACGTGCCCGTCGGCGTAGTGGAGGCGGT
AGTCCCGCGCGCCGTGATGCCGAGAGGCGTTGGGCAC	CTGACTGTCGCCACCATGCCGGTGGACGTGACGGGA
AGTCCCGCGCGCCGTGATGCCGAGAGGCGTTGAGCAC	CGGAACGAATCTTCTGCCCCAGCTTCTCGTCCCACCGCT
GGTCCCGCGCGCCGTGATGCCGAGAGGCGTTGAGCAC	CCATCCTTGATGGTCATCGCGCCAATGGCCATG
AGTCCCACTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TTCGCCGACACCAAGCGCCCTCCCATGGGCAGGGGGCCG
GGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ATGTCGGACATGGCCGTGACCTCGTAGAGCATGTCCCGG
AGTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	CTGCACGTCGGGTCTACCGCCGCCGTCACGGTGCC
GGTCCCGCTCGCGGTGATGCCGAGAGGCGTTGAACCC	TACCAGTCGAGGACGCCCTTTGCGATTGCTACCTCT
GGCCCCGCTCGCAATGATGCCGAGAGGCGTTGAGAACG

>NZ_CP012109|29|5|8957458-8958664|PILER-CR
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TTTTCCCGCTCGGCCACGCCGGGCAGGGCGAGCGTG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	AAACACTGGCTGGGCGTGCTCGCGCATGCGCCCTCG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ACCAACCTTCGCCGTGCGCTGCATGAAGAACGGAAGTG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	CCGGGCCGAATGGAAACGCTGGTGCGAAAGGCCGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TCGAACTCGGCGGCGAAAAACGGGACGCGGGTGGTCGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ATTGCCCACGCATGCGAATTCAGAAACCTTCTTAGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TCGTTGAGCGCGAGGGGCAGGCCGTAGAGCTTGTTGAG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	AACATGAACGAGACGGTGTTTTTCTCTGGTGGGCACCCCAG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ACGCACTCGTGCGCATGGCGTCGCTGTACGGGATCGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	CTGCTACTCCGCCCGACTCGGGTCGTCCGGGGCCG
GTCCCGCTCGCCGTGATGCCGAGATGCGTTGAGCAC	GGACCCATCGAGGGGGTGGGTGGGGAATGGGGGGTGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TTCAGTTGGGCCACCTTGCCTGAATCTGGATACGAGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ACCGTGCAGTCGATTGACTCCGACCTCATCGACGCCGGAGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	GCTTGCAAAATGACCGTACGTGAGCGGCGGGCACCCAA
GTCCCGCGCGCCGTGATGCCGAGATGCGTTGAGCAC	GGCACGCCGCTGGCGGCCTCCTTGGGGGTCGGC
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ATCCAGGGCGTGGTGACGGCAGCGGCCAACGCAGGCGTG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACATTCGGAGCAAGTACGACGCCTTCGAGCGCGCCTTTTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCGCAAGGGCGTCCAGGCGTGGATTCCCTTCACGAAGCCGGTCCCGCTCGCCGTGATGCTGATCGGCGTTGAGCACACGTAGCGAAGGCGGCGACCGTTCTCTGGCCTCGTCCCGCGCGCCGTGATGCCGAGAGGCGTTGAGCAC	TCGACGTGCCCGTCGGCGTAGTGGAGGCGGTA
GTCCCGCGCGCCGTGATGCCGAGAGGCGTTGGGCAC	CTGACTGTCGCCACCATGCCGGTGGACGTGACGGGAA
GTCCCGCGCGCCGTGATGCCGAGAGGCGTTGAGCAC	CGGAACGAATCTTCTGCCCCAGCTTCTCGTCCCACCGCTG
GTCCCGCGCGCCGTGATGCCGAGAGGCGTTGAGCAC	CCATCCTTGATGGTCATCGCGCCAATGGCCATGA
GTCCCACTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TTCGCCGACACCAAGCGCCCTCCCATGGGCAGGGGGCCGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ATGTCGGACATGGCCGTGACCTCGTAGAGCATGTCCCGGA


>NZ_CP012109|29|6|8957458-8959460|CRT
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TTTTCCCGCTCGGCCACGCCGGGCAGGGCGAGCGTG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	AAACACTGGCTGGGCGTGCTCGCGCATGCGCCCTCG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ACCAACCTTCGCCGTGCGCTGCATGAAGAACGGAAGTG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	CCGGGCCGAATGGAAACGCTGGTGCGAAAGGCCGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TCGAACTCGGCGGCGAAAAACGGGACGCGGGTGGTCGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ATTGCCCACGCATGCGAATTCAGAAACCTTCTTAGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TCGTTGAGCGCGAGGGGCAGGCCGTAGAGCTTGTTGAG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	AACATGAACGAGACGGTGTTTTTCTCTGGTGGGCACCCCAG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ACGCACTCGTGCGCATGGCGTCGCTGTACGGGATCGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	CTGCTACTCCGCCCGACTCGGGTCGTCCGGGGCCG
GTCCCGCTCGCCGTGATGCCGAGATGCGTTGAGCAC	GGACCCATCGAGGGGGTGGGTGGGGAATGGGGGGTGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TTCAGTTGGGCCACCTTGCCTGAATCTGGATACGAGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ACCGTGCAGTCGATTGACTCCGACCTCATCGACGCCGGAGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	GCTTGCAAAATGACCGTACGTGAGCGGCGGGCACCCAA
GTCCCGCGCGCCGTGATGCCGAGATGCGTTGAGCAC	GGCACGCCGCTGGCGGCCTCCTTGGGGGTCGGC
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ATCCAGGGCGTGGTGACGGCAGCGGCCAACGCAGGCGTG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ATTCGGAGCAAGTACGACGCCTTCGAGCGCGCCTT
TTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCGC	AAGGGCGTCCAGGCGTGGATTCCCTTCACGAAGCCG
GTCCCGCTCGCCGTGATGCTGATCGGCGTTGAGCAC	ACGTAGCGAAGGCGGCGACCGTTCTCTGGCCTC
GTCCCGCGCGCCGTGATGCCGAGAGGCGTTGAGCAC	TCGACGTGCCCGTCGGCGTAGTGGAGGCGGTA
GTCCCGCGCGCCGTGATGCCGAGAGGCGTTGGGCAC	CTGACTGTCGCCACCATGCCGGTGGACGTGACGGGAA
GTCCCGCGCGCCGTGATGCCGAGAGGCGTTGAGCAC	CGGAACGAATCTTCTGCCCCAGCTTCTCGTCCCACCGCTG
GTCCCGCGCGCCGTGATGCCGAGAGGCGTTGAGCAC	CCATCCTTGATGGTCATCGCGCCAATGGCCATGA
GTCCCACTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TTCGCCGACACCAAGCGCCCTCCCATGGGCAGGGGGCCGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ATGTCGGACATGGCCGTGACCTCGTAGAGCATGTCCCGGA
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	CTGCACGTCGGGTCTACCGCCGCCGTCACGGTGCCG
GTCCCGCTCGCGGTGATGCCGAGAGGCGTTGAACCC	TACCAGTCGAGGACGCCCTTTGCGATTGCTACCTCTG
GCCCCGCTCGCAATGATGCCGAGAGGCGTTGAGAAC

>NZ_CP012109|29|6|8958841-8959315|PILER-CR
	TTTTCCCGCTCGGCCACGCCGGGCAGGGCGAGCGTG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	AAACACTGGCTGGGCGTGCTCGCGCATGCGCCCTCG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ACCAACCTTCGCCGTGCGCTGCATGAAGAACGGAAGTG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	CCGGGCCGAATGGAAACGCTGGTGCGAAAGGCCGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TCGAACTCGGCGGCGAAAAACGGGACGCGGGTGGTCGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ATTGCCCACGCATGCGAATTCAGAAACCTTCTTAGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TCGTTGAGCGCGAGGGGCAGGCCGTAGAGCTTGTTGAG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	AACATGAACGAGACGGTGTTTTTCTCTGGTGGGCACCCCAG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ACGCACTCGTGCGCATGGCGTCGCTGTACGGGATCGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	CTGCTACTCCGCCCGACTCGGGTCGTCCGGGGCCG
GTCCCGCTCGCCGTGATGCCGAGATGCGTTGAGCAC	GGACCCATCGAGGGGGTGGGTGGGGAATGGGGGGTGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TTCAGTTGGGCCACCTTGCCTGAATCTGGATACGAGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ACCGTGCAGTCGATTGACTCCGACCTCATCGACGCCGGAGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	GCTTGCAAAATGACCGTACGTGAGCGGCGGGCACCCAA
GTCCCGCGCGCCGTGATGCCGAGATGCGTTGAGCAC	GGCACGCCGCTGGCGGCCTCCTTGGGGGTCGGC
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ATCCAGGGCGTGGTGACGGCAGCGGCCAACGCAGGCGTG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCACATTCGGAGCAAGTACGACGCCTTCGAGCGCGCCTTTTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCGCAAGGGCGTCCAGGCGTGGATTCCCTTCACGAAGCCGGTCCCGCTCGCCGTGATGCTGATCGGCGTTGAGCACACGTAGCGAAGGCGGCGACCGTTCTCTGGCCTCGTCCCGCGCGCCGTGATGCCGAGAGGCGTTGAGCAC	TCGACGTGCCCGTCGGCGTAGTGGAGGCGGTA
GTCCCGCGCGCCGTGATGCCGAGAGGCGTTGGGCAC	CTGACTGTCGCCACCATGCCGGTGGACGTGACGGGAA
GTCCCGCGCGCCGTGATGCCGAGAGGCGTTGAGCAC	CGGAACGAATCTTCTGCCCCAGCTTCTCGTCCCACCGCTG
GTCCCGCGCGCCGTGATGCCGAGAGGCGTTGAGCAC	CCATCCTTGATGGTCATCGCGCCAATGGCCATGA
GTCCCACTCGCCGTGATGCCGAGAGGCGTTGAGCAC	TTCGCCGACACCAAGCGCCCTCCCATGGGCAGGGGGCCGG
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC	ATGTCGGACATGGCCGTGACCTCGTAGAGCATGTCCCGGA
GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002634028.1\|8963619_8964162_+\|TIGR02265-family-protein	unknown	unknown	gnl\|CDD\|131318
NZ_CP012109.1\|WP_002634033.1\|8955247_8956909_+\|type-I-MYXAN-CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274899
NZ_CP012109.1\|WP_002634029.1\|8962726_8963386_-\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187554
NZ_CP012109.1\|WP_002634024.1\|8968535_8969405_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|225136
NZ_CP012109.1\|WP_193409823.1\|8965008_8968539_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012109.1\|WP_002634036.1\|8952015_8953632_+\|type-I-MYXAN-CRISPR-associated-Cas8a1/Cmx1	cas8b3	cd09713_cas8b3_CAS-I-B	gnl\|CDD\|132524
NZ_CP012109.1\|WP_021781219.1\|8961472_8962690_+\|Beta-mannanase-ManB,-contains-ChW-repeat-protein	unknown	unknown	gnl\|CDD\|366944
NZ_CP012109.1\|WP_002634022.1\|8972167_8972995_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP012109.1\|WP_002634035.1\|8953656_8954565_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09650_cas7_CAS-I	gnl\|CDD\|273846
NZ_CP012109.1\|WP_002634027.1\|8964198_8964870_+\|exopolysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|226442
NZ_CP012109.1\|WP_002634034.1\|8954561_8955206_+\|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS	cas5	cd09688_cas5_CAS-I-B	gnl\|CDD\|131635
NZ_CP012109.1\|WP_082282888.1\|8949182_8949794_+\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	cas6	cd09703_cas6_CAS-I:CAS-III	gnl\|CDD\|274308
NZ_CP012109.1\|WP_002634040.1\|8946017_8946941_-\|DUF2381-family-protein	unknown	unknown	gnl\|CDD\|131321
NZ_CP012109.1\|WP_021781220.1\|8959954_8960680_-\|double-CXXCG-motif-protein	unknown	unknown	gnl\|CDD\|370549
NZ_CP012109.1\|WP_002634039.1\|8947287_8948757_+\|SAVED-domain-containing-protein	unknown	unknown	gnl\|CDD\|380122
NZ_CP012109.1\|WP_002634032.1\|8956912_8957206_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NZ_CP012109.1\|WP_002634037.1\|8949790_8952031_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP012109.1\|WP_044889968.1\|8960686_8961352_-\|TIGR02269-family-lipoprotein	unknown	unknown	gnl\|CDD\|370548
NZ_CP012109.1\|WP_002634023.1\|8969655_8972121_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002634041.1\|8944134_8945988_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002634028.1\|8963619_8964162_+\|TIGR02265-family-protein	gnl\|CDD\|131318	TIGR02265, Mxa_TIGR02265, Myxococcales-restricted protein, TIGR02265 family. This family consists of a set of at least 17 paralogous proteins in Myxococcus xanthus DK 1622. Members are about 200 amino acids in length. No other homologs are known; the function is unknown.	5.18914e-60
NZ_CP012109.1\|WP_002634033.1\|8955247_8956909_+\|type-I-MYXAN-CRISPR-associated-endonuclease-Cas4/Cas1	gnl\|CDD\|274899	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN. Members of this protein are the Cas1 endonuclease, or Cas1 domain in Cas4/Cas1 fusion proteins, of the MYXAN subtype of CRISPR/Cas systems. These systems typically feature repeats and spacers each about 36 base pairs in length. Species with this type of CRISPR system include Myxococcus xanthus, Cyanothece sp., Leptospira interrogans, Sorangium cellulosum, Anabaena variabilis ATCC 29413, etc.	0
NZ_CP012109.1\|WP_002634029.1\|8962726_8963386_-\|NAD(P)H-binding-protein	gnl\|CDD\|187554	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5. This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.19639e-26
NZ_CP012109.1\|WP_002634024.1\|8968535_8969405_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|225136	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].	3.66076e-20
NZ_CP012109.1\|WP_193409823.1\|8965008_8968539_+\|AAA-family-ATPase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.97491e-64
NZ_CP012109.1\|WP_002634036.1\|8952015_8953632_+\|type-I-MYXAN-CRISPR-associated-Cas8a1/Cmx1	gnl\|CDD\|132524	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype. Members of this family are found among cas (CRISPR-Associated) genes close to CRISPR repeats in Leptospira interrogans (a spirochete), Myxococcus xanthus (a delta-proteobacterium), and Lyngbya sp. PCC 8106 (a cyanobacterium). It is found with other cas genes in Anabaena variabilis ATCC 29413. In Lyngbya sp., the protein is split into two tandem genes. This model corresponds to the N-terminal region or upstream gene; the C-terminal region is described by TIGR03486. CRISPR/cas systems are associated with prokaryotic acquired resistance to phage and other exogenous DNA.	5.49032e-119
NZ_CP012109.1\|WP_021781219.1\|8961472_8962690_+\|Beta-mannanase-ManB,-contains-ChW-repeat-protein	gnl\|CDD\|366944	pfam02156, Glyco_hydro_26, Glycosyl hydrolase family 26.	2.88042e-25
NZ_CP012109.1\|WP_002634022.1\|8972167_8972995_-\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	8.19894e-28
NZ_CP012109.1\|WP_002634035.1\|8953656_8954565_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|273846	TIGR01875, CRISPR-associated_protein_Cas7/Cst2/DevR, CRISPR-associated autoregulator DevR family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This model represents one such family, represented by MJ0381 of Methanococcus jannaschii. This family includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development. [Regulatory functions, DNA interactions, , ].	2.26697e-61
NZ_CP012109.1\|WP_002634027.1\|8964198_8964870_+\|exopolysaccharide-biosynthesis-protein	gnl\|CDD\|226442	COG3932, COG3932, Uncharacterized ABC-type transport system, permease components [General function prediction only].	1.25049e-50
NZ_CP012109.1\|WP_002634034.1\|8954561_8955206_+\|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS	gnl\|CDD\|131635	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN. This model represents DevS of Myxococcus xanthus and related proteins of Leptospira interrogans and Gemmata obscuriglobus. This protein is encoded in a cluster of CRISPR-associated (cas) genes, and in the special case of Myxococcus xanthus has taken on a role in the control of fruiting body development. CRISPRs are clustered, regularly interspaced short palidromic repeats. This protein family is related to models TIGR01868, TIGR01895, and TIGR01876.	3.34155e-91
NZ_CP012109.1\|WP_082282888.1\|8949182_8949794_+\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	gnl\|CDD\|274308	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN. Members of this protein family resemble the Cas6 proteins described by TIGR01877 in having a C-terminal motif GXGXXXXXGXG, where the single X of each GXG is hydrophobic and the spacer XXXXX has at least one Lys or Arg. Examples are found in cas gene operons of CRISPR regions in Anabaena variabilis ATCC 29413, Leptospira interrogans, Gemmata obscuriglobus UQM 2246, and twice in Myxococcus xanthus DK 1622. Oddly, an orphan member is found in Thiobacillus denitrificans ATCC 25259, whose genome does not seem to contain other evidence of CRISPR repeats or cas genes.	4.88721e-86
NZ_CP012109.1\|WP_002634040.1\|8946017_8946941_-\|DUF2381-family-protein	gnl\|CDD\|131321	TIGR02268, TIGR02268, Myxococcus xanthus paralogous family TIGR02268. This family consists of at least 8 paralogs in Myxococcus xanthus, a member of the Deltaproteobacteria. The function is unknown.	8.15424e-72
NZ_CP012109.1\|WP_021781220.1\|8959954_8960680_-\|double-CXXCG-motif-protein	gnl\|CDD\|370549	pfam09535, Gmx_para_CXXCG, Protein of unknown function (Gmx_para_CXXCG). This entry consists of at least 10 paralogous proteins from Myxococcus xanthus and that lack detectable sequence similarity to any other protein family. An imperfectly conserved CXXCG motif, a probable binding site, appears twice in the multiple sequence alignment.	2.05955e-107
NZ_CP012109.1\|WP_002634039.1\|8947287_8948757_+\|SAVED-domain-containing-protein	gnl\|CDD\|380122	pfam18145, SAVED, SMODS-associated and fused to various effectors sensor domain. Predicted to function as a sensor domain, sensing nucleotides or nucleotide derivatives generated by SMODS and other nucleotide synthetase domains. The sensing of ligands by SAVED is predicted to activate effectors deployed by a class of conflict systems which are reliant on the on the production and sensing of the nucleotide second messengers.	2.32625e-28
NZ_CP012109.1\|WP_002634032.1\|8956912_8957206_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	6.46112e-16
NZ_CP012109.1\|WP_002634037.1\|8949790_8952031_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.06589e-38
NZ_CP012109.1\|WP_044889968.1\|8960686_8961352_-\|TIGR02269-family-lipoprotein	gnl\|CDD\|370548	pfam09533, DUF2380, Predicted lipoprotein of unknown function (DUF2380). This family consists of at least 9 paralogs in Myxococcus xanthus, a member of the Deltaproteobacteria. One appears truncated toward the N-terminus; the others are predicted lipoproteins. The function is unknown.	2.77686e-90
NZ_CP012109.1\|WP_002634041.1\|8944134_8945988_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.84675e-51

>NZ_CP012109.1|WP_002634032.1|8956912_8957206_+|CRISPR-associated-endonuclease-Cas2
MAEPRRWYLITYDIRDPRRWRKVYALLKGYGEWLQLSVFRCSLTDRDREKLRWELARRMDAVDTLLVIGRCGGCVERVRAINAKEDWPEEPALFKVL
>NZ_CP012109.1|WP_002634033.1|8955247_8956909_+|type-I-MYXAN-CRISPR-associated-endonuclease-Cas4/Cas1
MSTSVLSPKPANTEPSIRTHALHALAYCERLFYLEEVEELRVADAAIYAGRRLHHQLQEEGERVELELASEALGLHGRVDAVRTREGTLVVHEHKRGRHAPAPEVPGAWPSDRLQVGAYALLVEERFPGVPVECRVRYHQTETTVRFPLDAALRGEVASAVARARLLRASRERPPVTQEERKCAKCSLAPVCLPEEERQVAGEDRPRLFPEDDVRQVLHVATPGTRVGRASEELVVTPPEGEGAPSRQPGRMVSALVAHGAVQVSSQALAYCVENDIGVHWFTSGGRYLGGLGGGTGHVHRRMRQFEALRQESVSLGLARRLVAAKLEGQLRFLLRASRGDADAREVLASAVRDLRALLPKCAEAPSRDVLLGLEGAGAARYFGALPYLQGEDVDPRLRFDGRNRRPPRDRFNAVLGFLYGMVHREVDAAIRSVGLDVAFGFYHQPRGSAGPLGLDVMELFRVPLADMPLVASVNRRTWDVEADFEVTSEHVWLSKAGRAKAIELYERRKRETWKHNVLGYSLSYARLVELEVRLLEKEWTGKPGLFATFRLR
>NZ_CP012109.1|WP_002634034.1|8954561_8955206_+|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS
MIAIELTVPVACWRKGRARELVETEVLPPPATCYGALLSLVGEQDRERHRGCRVTAGLLNAPGISTVLRTFWRTKNLKVAKGNEENAAPDQQQLVIDAHLVVWCDSSEEHASAESLEARVVRAMRAPGTVERAGAWSLGESTHLINDARLLPEGRPPSDCRVFLTASMGGITLPVWVDHVGTRGSRYAVGRLEAVTEAPEVQRLPRIPLVEEAA
>NZ_CP012109.1|WP_002634035.1|8953656_8954565_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MSLHVFAAFVTPLGTAANNRGLTEGNITSLQKLVWNGQVHTTVSAESIRFALRRRLNEQEPCNRTYDDAARANVWKDDAFSAWAAKSKEKTYIDDDLLGFMSAEGAKQEKEKGTAKVRRAVLEVSRAVSLTPWSGDVTFNAASPGATPSAQKKGSNPVPYGTEMHATRYQYGVALTPEALRVPARAATALNQLCALGPVAGNHGRFLFDFSPESVVFRLTQEAAPRILHAFEPSSRAGGVELASLLRKVKSGDVPAKELVLGGHVVEGLSAEEREVLAGAELHTGVVAACRAACKRMEVGKK
>NZ_CP012109.1|WP_002634036.1|8952015_8953632_+|type-I-MYXAN-CRISPR-associated-Cas8a1/Cmx1
MAKAVSPRKKALPAPLSISLYAPGMTPLLRAGAGGLAASLRAILLGATPSASWPSPVSLGPGTATVSPEAIHFDWGGAAPEATLKPLFEASFRVKQGFIDLPGARRPNAPEPPPELAAALHDALKVTFLQHGKSTQGGTRKRITFEVDDQPVVVESQGYASFVHQGAWQNVLEALESGSTVLASWAYPGAAERHIGVRVTKVEYTAQEALCACFALVGCVSFKLPQLRGGAFVALAPTDLVCFARLRSGLTPGRLVDVAVAGASDAVLAAQLAMKLEAKGELGKVLGAAEAVALRQMPWNAQQKIRGAVVRQDTVSEDVLNAYEVAAAALKSKLRVRKPEGKGEAGYFIATSALRAFITENLAAARPWFAGFATATTAEGRFIHDYCGRDNLGALLWDERKGLIAMHPKLKESEQWLVQSVHLALRSRFRGIYEDTKESPPATRSNRLKGERERLRLSFAGAKTPEQVRAALADLWSRAGPNRELQEHWKDILPLLGPERWRDARDLSLVALASYQGRGGDTAELEDAEASSDASELS
>NZ_CP012109.1|WP_002634037.1|8949790_8952031_+|CRISPR-associated-helicase/endonuclease-Cas3
MKRLLAKTTATPDRPEGEATLLGHTALVLSSARRLLEHRGRASLLAAGLAPTWEPRLRRIALLAAALHDLGKCSEHFQSMLRRKRTEPQLVRHEALSLWLCWPGQPLSSWLLGGMDELDLCLALVSAAAHHRKFQSDAFAPDGTGAGLSLELWVHHEDFARTLKRIAEELQLSAPPVFTAPIVLRATRKEHPRDQLQSWQDDFERVVPVDSPDARLLSVCKALVLAADVAGSALPRSGEKQDWVDRQLTAPHPAEALRTVVERRLGGRLPRPFQDAVARSSAPVTLVRAGCGSGKTVAAYLWAVTRHPGRPLWLTYPTMGTATEGFRDYLHGADVDARLQHSRAEVDFDIFGLRDGADPGRGSRDQDRLDALRSWGVDAMSCTADTVLGLVQSQRQGLYAWPSLCSACVVFDEIHAYDDRLFGCLLRFLEALPGLPVLLMTASLPVARLGALRDLCERVHGRSLAVVDGPEDLETLPRYQRLDVEDPWPLVTQCLRDDGKVLWVSNTVDRCMRAAEAASSRGAHALLYHSRFRYEDRVHRHGAVVAAFAKSGCSVFASTTQVAEMSLDLSADLLVTDLAPIPALIQRLGRLNRRSTPEAPERVRPFVVLPFDGAPYSAPALRDARAWLVRLGMGELCQRDLVSAWEAHGVTEAPQRYSSTWLDGRFDTWPAPVRDGSPSLTVLLEEDARKVLAGEVRAHEVTLPMNLPPESLKWRGWPRPGRLPYPIPPAGTLDYDELRGARWRKP
>NZ_CP012109.1|WP_082282888.1|8949182_8949794_+|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6
MAFVDLLFPVQGGPVPLDHGYLLFAALSRHIPALHECADMGVFSLRGVSNTRELLYLGRGTLRLRCPVDAVGTLLPLVSAPLEVAGRRLSLGAPSLYALEPVPVLSARLVTFKHAMDEASFVVAVTRALETFGVEASLKVGRRRIVCIAGKKVVGFALELHGLSAEHSLRVQERGLGGRRHMGCGLFLPPGRVARAQSRGKAA
>NZ_CP012109.1|WP_002634039.1|8947287_8948757_+|SAVED-domain-containing-protein
MGEQSASRLEGDRYQHLLSWYELLRLLEADSPFESGHVEHPTAGSADDVTLHARPGAGVSSRYMQVKWHVDHRDTYSLSGLVTPPREGNSLLRKLLESWLALRPLGPVEIWLLSNWASAEDLGRYLHGRDHCFTDAFFVQPPRGALKKHWAEWERQLGAPAETLRAFCKDLRLRLVAGSITDVEEQVDDRMGRLGLRTGRQPRAVAVDGLREWVELGGGKKRVTPESLREVIRAWGLLASREAVPTVSLWIHGWARRAWDVPPTEELDWTAYFDRDTRTLPSEAVWRETLLPSLLAVRQRLSRRPDGALIDLRGKLPLSTVLAVGFQFPEVGGYRFRVEQPTRGETFLWRSDAKPSGRGLRVTRHDVNADAAELLVMFQMTGDARADVDRFLAERPGHFRAVLYLEPEGGPHDGAVGSAADAVEFAVQAREQLRRERNALRTTVTHLILYAPAACCLFLGQRLNAVGPVVAYERTGTGGYAPALTLQTG
>NZ_CP012109.1|WP_002634040.1|8946017_8946941_-|DUF2381-family-protein
MFPPGSLLMTAVVLLLGTAALAQTPDAKRWRRIERTVDLSAGTGEPIQRLRVAPGVVTTVLLDSDAVLEGEPHEPLQGLFHRLDFAGKHLLLKPAVVMPASGVPPLVLRFTDEAAPRRLVLELSTEASVVDAVVEVRRRPATVEQLEAELVALRERNAVLEARLASARRTVPQQGLVGAILSDAIASSGVVVHWLEDKASETGLKVHRLRSYRSGAWMAFAVRLENPRSEAPWQPGIARLIHLDPSGHPTGETLEVPLLMQEPRLLPGQSAAAVIEWSAPVSPPPAYALELWDTGRRRGARWARLTP
>NZ_CP012109.1|WP_002634041.1|8944134_8945988_-|serine/threonine-protein-kinase
MRLESTSSSPRPRVLSTQALPVGTRLDRWSVARRIGGGGNGTVYEVRSRPGGRSYALKLAHAPSDLRFQREARALRLLRHPGVVRLRATGIWHTGTAAYPYLVLEYVRGSTLYDWSRARNPTARHVASLLAQSAWALDAAHRRRVLHRDFKGDNLRIRDDGRLVVLDWGASWHPEASPLTSATRLPPGTGPYRSPQALLWSMQAPRQAAPSEHYPYTVADDLYAMGVTFHRLVVEQYPPLVLQEPRPPLASATLRVLNPRVPEPLARWIGELLAFTPEARPASAGSLARDVHEALARAGPAWDAPLFDWYEGASTATRTTQEENGGGAVAPGEEAALHSARPLRESRVQLHREKRWRRRRVRSEVEAQCTTESAGPSAQRHVSRRIRIAGALSLVVCIAGALAQVGIPPGNTAALPAQQLARTEGPADTGLPATAHPFPIAEFPWPADAMSTTEPHARCATRLHHYLLAAFSAASLNACSGPQVRPGPEKCPVEALESMRRLELPIGVGGFIQLDLQQPDDSDQTNYSIVVSDGPITSRLDETLGHLPTNTLFYGRIWTGGERIQGRYTRVRTPDGSEYPVCFVLGNATGMPKDQGSRPGYTRVHPWSNAMAVDRFP
>NZ_CP012109.1|WP_021781220.1|8959954_8960680_-|double-CXXCG-motif-protein
MTRYYWLVEDKAATARHAGDINAAHRWKLPGLASCPGCGATWAGAGHYYPAVDLSALPEQASFLKARPEPFSEYARLRELVRPLAPPHVPLPPGTRFGPLEGTARGDLGPFTWIGNALLLMRQDALEQLQMKDVYGFIGGWASLRFRQKSPPAYFEPQLQPHGRLHPDCLPRDATPPCGTCGWVDLSRPEEPVLDATAIPPNLDIFRLGNFATMIVSTERFMNAVLQSKLKGIRFLELAMR
>NZ_CP012109.1|WP_044889968.1|8960686_8961352_-|TIGR02269-family-lipoprotein
MGTRLLLRLLLAVFIQACATTESSRAQTGADASTECHPSPEAPCVNLLCIGDACGFYRCDNDLRPFQLARFPPARPPAAAAAPGAGPRRNWGPGQQLPRGAVMVFPNWNGAPERIIPPSHQLPAGRWEKHHIFPQARDLAEWFETQGVKIHHYTMPIPRDLHQRIHRGGERGGAWNQAWREFMEARPNARPEDIYKHAGQLIYRFQLLGGPIQPYYSRPGA
>NZ_CP012109.1|WP_021781219.1|8961472_8962690_+|Beta-mannanase-ManB,-contains-ChW-repeat-protein
MHTSSIAASLRFSNPLRRVILGAAVCVTALLLNLSPTAAQAQVSRTLSTPFPSPQARKVFDLLVTLENNSRNGVSKQTIMGQHCEAQKERYAGEYWVRVGEIAGRRPGFVEFDFGPGNYGPTYQAPYVDTSVGFARDRFLFGEGIVGFSFHQSYPGASVKSWENNFRQPWMDYNWFGRVINWQANTAEYRALLSDLSFAADKLAILKQLNVPVLYRPFHEMNKRPNASPFWWSNQDPAQYRQLWVIMHDYLVRTRGLDNLIFVWSPYEWDGTYGGDPWNYYPGDDRVDVVAVDIYHGNPYFPGQFYTDLGARYRKPRMLAETDKLPVRWGDSRYATVSEIDARPWVLWSVWGDTLLYNVGTTTPNDWNVSNNHKAIRDSYSYHDGSIWRVLTGGANPTYNWGSLR
>NZ_CP012109.1|WP_002634029.1|8962726_8963386_-|NAD(P)H-binding-protein
MNMSPRHLFVAGATGATGRNVMRQAIARGVPATAHLRPKSASSELAQAWPHKAVVEIARVDELVEQLRGAGVTTVLQLIGTMRKRFGSGDTYETSDIGTTRNLVHAAKSLGVDHLVLLSSVGAGRPVGAYLKAKAEAERLVRESGIPWTIVRPPAFEGEYHHISPVLRALTRLPLLRGMRPIHLDQLAAVLLRVAERRAPLNQVLEGDTLWAEVAAAGA
>NZ_CP012109.1|WP_002634028.1|8963619_8964162_+|TIGR02265-family-protein
MEKPEPLVFQQSFQGLIRALGDDLDDTCAGRLRDAGLDTRGSLALAYPLEVWVAALKVAAATLAPESPLDEAAAVVGKRFVEGFSSTLIGNALLGTVRLLGPQRMLARMTRNLRTGTNYLETHMEQLGPTRYALTCRPVVVAGFYVGLFLAGLEASGARNPAVQIVRREGEEAVYDIAWG
>NZ_CP012109.1|WP_002634027.1|8964198_8964870_+|exopolysaccharide-biosynthesis-protein
MSTPSSNPSSSSASFSDTQVQLSATLRALSSRLPESLTVRELMQACGEQGLLLFCCILTFPFLLPVSIPGVSTVFGLLIVLIGVGVTFNRTPWLPRKLLDKTLLRTNLAPALDKGAEVFTKYVDRLSKPRLLVLTHGSSTNRFNGFMLFFAGVLLMMPFGLIPFSNTLPALAALFFAIGILQRDGYFILMGHGMTVGTLTYFTVLIYGAVQGGRSLASVFGGG
>NZ_CP012109.1|WP_193409823.1|8965008_8968539_+|AAA-family-ATPase
MRQYPLETQPRLEDAARRHAEGEVVGGRYRILDFLGRGGAGTVWRAQDLLAGPVAVKRLHQTLEDLARLPEGENTPSSMARHELALSLAHEFQTLASVRHPHVISVLDYGFDAEHRPYLAMDLLEDAQHLVKAGTGQPLRVQVGLLVQTLLALAYLHRRGIIHRDLKPANVLVAHGQVKVLDFGLAVGREHVHRAQPGGTPGYLAPELFEDQPPSEVTDLFSVGAMASQMMFGRLPHAGQVPAPPDFPPELKAALERLVSPDPRERPRGADAVIAELCAATGEPVPPESAATRESFLQAARYVGRVEELSRLSAVLEAAMVGRGGAWLVGGESGVGKSRLLEELRALALVKGAVVLRGQGVAAGGSPYQEWRPVLRWLSILTPLDEREASVLKPLVPDIESLLGHPVADPAEVGADMVQARLLQVVEDVFARLTQPVVVVLEDLHWAGGESLHLLARLATRAPTLSLLLLGSFRDDEAPALPSALPDLSLLRLPRLGAREVSLLSESMMGAPGSRPHLVELLLRETEGNPFFLVEVVRALAEEAGGLDRLGDMALPERVFAGGVRRLVQRRLEKVPVAARELLRVAAIVGRQVDVPLLRHAVPGVDVEGWLTDCEAAAVLDVADDHWRFAHDKLREGVLDELPADARPELHRRAALAMEAAHGQRPEWASALAYHWGMAGDALREASHARRAGEDALRVGACQEALSFLTRALERVSGAGGDAMSLGHLEALLAETRFQLGELQAFRSHAERALKHFGWPVPTTRMGWALGTVGQGVLRLAQSSRPEDYDEETEDRRRVRRVAGRLLMRLLDAFIYAHQALPVLWSGLRALNLCEPAGASPELARGYTSMAVVVGTLPIRAVAETWVRRALEVAESVGSPADLAFVLCRNAVYGAYVARWAEAEAWLERAIGIVDSVGDLRLAEECRALLTVVSCYQGKFARGLPLMAWLKHSARRRGALQTQHWALHYQAHIHLRLGALDKARAALEETLAWTESQGGQTDRIIVEGTLALLRLREGDAAGAREAAEQALAKMSAGKPVAHFVYFGVVTVAEVLLTLWEQGADASLVASAKAARREADVFARVFPFGEAAARLWRGSEAWLEGDATRAFESWRRCITVASKKGQAFEEAHARLSLARHLPSEDPARWGHQQRAVELFTRLGMRDELARAEAIASR
>NZ_CP012109.1|WP_002634024.1|8968535_8969405_+|class-I-SAM-dependent-methyltransferase
MNGVQARDVASLACPACGGTLVFHGREAHGCLREGWLRCGGCGEAWRVERGMARLYREDTVRGTDRLMRVIYDGLPVLHDPLTTLLTPLFQSVSEARMRAGYMRRLELASLVPHEDGSPVRVLEVGVGSGANLPLIRDGLPSGLDVEVWGVDLSEGMLKHCRRRLKAGDYSGVRLMMADAHTLPFPDASFDRVLHVGGIGGYREPAQALAEMARVAKPGTPLVVVDEQMDPAFRPSLFQRAAFRAITFYSSDPHCPRELLPTGAVDVREEQVAPFYYCLSFRMPGAHAG
>NZ_CP012109.1|WP_002634023.1|8969655_8972121_+|hypothetical-protein
MSKPEFELHLGGGLYLDSQGNIRQGAPPPKSVPVFEVPFQLPLEPSKLKDTVAKVEKALKSVTKDPEVIAMFARFGYASKLLDVLSAVTKVAAMIAPVLSVAAFAYDILKLFGLFKSTPSSFEKKVMEAVAEITDTQRVIFAHITETHVTGAHSRISTWVAGVMDYFTSLQNSHPSLQDLKDEYNKLESTQEERSGDVQWLLTDLTWRILFPRADYSRVWGFMSDLVHTMPAAAGQPPVKTPFPANNSLVFDHRLMTPLVLFASEAYLTAIRAIRPEHRVIGTFHNKLLLMADALERCAQQMRSDGLGRTVYAPSHFTRVRASDVIPGRPFTGAPVISPRCSRWPVGALDLRRHSDSYFNTFLNDLSLAETRGNVTSSRFGGLDFRWIPPAVLGEHQEPWGWEILNPDECAAAANAQSEADYAELLATSGYVELLRVVALLRNEATEPSSSMTASQKRMSLFRAPLPAESVAIKSGGSGWVKETVGTGKRESQNWGATLALGTQPLNRAYPLKYNIVLRTLVAGASYEDYYRTSYVPEPDRPSALALAIDTVPGVLLDEFYIFKNVESPREAVGLHDRQRVMTAATFDWWIQVATPFSLDNDFLETAVELGTLGFIAPVGGGSAGDRLPDGTPGTGASVGMASWLPGGLPNDVIGTHTPFIGWKPGVAELDGQRREPKVVPVTVKYRIDWLGDDLRMEFRNVPQDRNYVVHVVLEEFLPRTGKWLHTAIPVPINGCLTFIPQRFFEEEAKAVANAGQAIAVFYKRQFVDVAVGRPPPDPKFDPIRPGDLVSLNQVVSLGQSLERLGFTLEMQERDGGPGEG
>NZ_CP012109.1|WP_002634022.1|8972167_8972995_-|SDR-family-oxidoreductase
MNEGGGDTGQEWAVILGASSGTGAGIAEAVAHKPGLNVFGVHRGRYPDTASQLEQQVRSAGRRVVMWQADASTPEAAEAGVAALREVAGLRSVKLFVHSIAGASVGHFLSAGEDRLHARRIRRTFDTMAHSFVYWAQALADADLLAPESRLLGLQNPLDETHLGNTGLISASKAALEMYVRYLAMELGPRGHRVNLLKFGTVMTPALKHVYSPEALARLEAAHAKMNPAGRMSTVEEVARFVTVLAGEEAGWFNGATIDFTGGMTLRLLDLVLNP

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Crispr_ID: NZ_CP012109_31

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_31

9240090-9245103

TypeI

Consensus_repeat	Method
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CRISPRCasFinder
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CRT

70 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP012109_31

>merge|NZ_CP012109|31|9240090-9245103|CRISPRCasFinder,CRT
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACCAGCCGCGCAGGGACGGGCAGCCGCAGATGATGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACGGCTCGGTGCGACTCCAGAAGTTGCAGGGCGAGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACGACCCGAACCAGTTGGTTGCGCAGGCCGAGCAGCGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACAACGTGGCTCTCAGCTTGCGCAAGCGGGAGAGCGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACGTTGCCGGGCCTGCCGCCACGGACGCCGTGCTGGAGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACGCCCGACGCGGGGCATCGAACGAGGGCACCTGGAGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACAACGGCACTCCCATCCCGCCAGCGTCGCCGGACGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACTTCGCGGGCGGGGTGGTGGTGGGCACCGCGGGCGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACATCGCTTCGTCTCCGTGGTGTTCGGTGTTCTGGCCGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACTCCGGACTGCGTTGAACAACCTCCGGGCCTGAGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACCGCCCCCGGCATCCCCCGCGGCCTCGGCGGCGGCGTCGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACACCAAGCTGAACTCACAATCCAGGAGCTGCTCCGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACCCGAAGCCTCCCCCCTTCGGTGGCGGAGCGCCCGTGTGTCGCTCCTCGTGAACGCGAGGAACGTGGGTTGAAACGGGCAAGGCGCCCCTGCGAGGCCCCACGGTGGGCCGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACCTGCATGGCCGCCACCAGCGGCGCGAGGTAGCCGCGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACAGCCCGACGATTGACCAGGACAACCCCACTCGGGCCGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACGTCGACCAGCCCTTGCACGCCCAGGTGCTCGCCCGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACATCTCGGCGTCGAGGAGTTGCTCGCGCGACAGGTCGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACTCGCGGTAGGTGCGCACGCGCCGGGTGCTGTTGGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACTCCGCGTTGGTCGAGATCGCGCCGAACGTCGAGGCGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACCTCGTCCGCCATTGCTTGCTGCCTTTCGTGCGGTGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACCTGCTGCCGTGCTTTCGCCTGGAGGCTGCTCAAGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACCCCAGCTCGCCGGCGGCGCGGTACAGCTCGGCGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACTAGAGGGCGGGTATACGCACGTTAAGCCTGTCTGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACCTGACGGGAGCAACGGGGTTGCTGTCCATGGCGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACTTCGGCATGTTGGCGGACGGCCTGGGGCTGTAATGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACTGGGTCAAGCAGCGTCACGCCCAGGACCCCATCGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACACGAGGAAACCGCGCTCTTTGCGCATCCAAGCCCGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACAACATCGGCACGCTCGAAGCCCCCAAGAACACCGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACCCGCGCAACCTCTACTGACAACGGCGCGCCCTGGTGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACGCGGTCACCGTCGAGCACTCGCGCCAGCTCGTTGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACAATGGGCAGCGTCTACCTCTGCGGGGTGATGGAGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACCTCTCCAGCCTGCTCCCGCGCGAGCTCTACGTGGGCGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACGATTACCGTCGGCCGCCCTGAAGACGACGAAGTGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACAAGGTGGAGAGGATTCGCAAGAGCCCGCCATCCGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACGTCCCCTCGTCGAACACCTTCACGAGATTCTCGACGTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAACAAGTAGTCGCACACTTGATCGATGGTCCACAGGCATGTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAACTGGCGGGCGGTGGCGGAGGCAACGCGGGCCCACCTGTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAACCCGGCCGCGGAGCGGGTGTTGGTGCCGTTGGTGGTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAACAGCAACTCCAGCTTCGAGCGGCTCCACATGGACGGTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAACTTCACCCTGTGAGGCTCGACGTGGACTGGTGCTGTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAACAAGGGGCTGACGGGTGCGAACCCCGCGGGCCTCGTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAACCGGTCGAGCTTGCACAGGGAGACCTCACTCGCTGAGTCGCTCCTCGTGAACGCGAGGGCGTGGGTTGAAACCAGATTGACGACCGCAGCCATGGGGAGTGGCTCGTCGCTCCTCGTGAACGCGGGGGCGTGGGTTGAAACTTGCCCTTCTCCGGACCCTCGAAGGTCTCGATGAAGTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAACCGCCAACCGTTGAGGTCGAGCCCAGCCGCTTCGCGAGTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAACGCGTACGCCTCCACGTTGGGCGCAATCTCCACGAGTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAACCTTTCGGAACCGCGCAGCCTGCCGAACGCTGAGTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAACGCATGGCTGAGACGGGCGAGTATTTTCCGGGCAAGTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAACGTGCATGTCCCCGCTGAGTCTCTCATCGCTGCCTAGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACCTGCACGATAGCATCCTCAAGACGCCGGGTGCTGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACTCCAGCTTGTCGTGCTTGCCCACCATATGGACCAAGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACTCCCGCGCACGATAGCCCAGCTCCAGCCGCCCGGTCGCTCCTCGTGAGCGCGAGGAGCGTGGCTTGAAACGTACTGGTGGATTCGCTGCTGGAGCGCGACGCGCAGCGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACTCTGACGAGGCGCCCCGCGAGTGGCTCCTCCCGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACGCCACACCTCCAGCGCGCGCACGCCACTGCTGGTGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACTGCATGATGCCGTTGCGCAACTCTGCTGTGAGCGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACTGGGCGCTGACGGAGGCAGTGGGGAACATCGAGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACAGCAAACGACTGGACCGACAAGCCAACCATCGCAGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTAAAACGCGTTCTACTACGGGCCCTGGCAGTGCAAAGCCCAGCCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACAATCAGGATGCGGAGGCTCAAATCTTGGCCTGGGGGCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACCGCTCGGCATGGAGTACTGCGGCAGGCCGTGCAGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACAGAGATGTGTCGCCTGGGGGCACGGAACTGCTCTGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACGCGCGGAACGGGGCGCTCGTGCAGGTGGTCAAGGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACCGCGCGGCGAATCTCTACTCTGGGCACCGACTCAGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAACAAAAACGCGGGTTACATGAGCGGCCTCGCGGTGGAGTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAATCGATGCGGAAGGGGACTCGTACGAAGTTCACGCAGTCACTCCTCGTGAACGCGAGGAGTGTGGGTTGAAACTGGGACAAGGCGAATGCGCTGGAGTTGCTGTCGAAGTCGCTCCTCGTGAAAGTGAGGAGCGTGGGTTGAAACAACCAGGACGCCGAAGCTCAGATTCTGGCCTGGGTCGCTCTTCGTGAACGCGAGGAGCATGGGTTGAGGCCGCGTCGAGGTGCAGTGCTCGTCGGGCACGTCGTCGCTTCTCGTGAGCGCGAAAAGTGTGGGGCGAACC

>NZ_CP012109|31|24|9240090-9245103|CRISPRCasFinder
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CAGCCGCGCAGGGACGGGCAGCCGCAGATGATG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GGCTCGGTGCGACTCCAGAAGTTGCAGGGCGAG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GACCCGAACCAGTTGGTTGCGCAGGCCGAGCAGC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AACGTGGCTCTCAGCTTGCGCAAGCGGGAGAGCG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GTTGCCGGGCCTGCCGCCACGGACGCCGTGCTGGAG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GCCCGACGCGGGGCATCGAACGAGGGCACCTGGA
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AACGGCACTCCCATCCCGCCAGCGTCGCCGGAC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TTCGCGGGCGGGGTGGTGGTGGGCACCGCGGGC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	ATCGCTTCGTCTCCGTGGTGTTCGGTGTTCTGGCC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TCCGGACTGCGTTGAACAACCTCCGGGCCTGA
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CGCCCCCGGCATCCCCCGCGGCCTCGGCGGCGGCGTC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	ACCAAGCTGAACTCACAATCCAGGAGCTGCTCC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CCGAAGCCTCCCCCCTTCGGTGGCGGAGCGCCCGTGT
GTCGCTCCTCGTGAACGCGAGGAACGTGGGTTGAAAC	GGGCAAGGCGCCCCTGCGAGGCCCCACGGTGGGCC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CTGCATGGCCGCCACCAGCGGCGCGAGGTAGCCGC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AGCCCGACGATTGACCAGGACAACCCCACTCGGGCC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GTCGACCAGCCCTTGCACGCCCAGGTGCTCGCCCG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	ATCTCGGCGTCGAGGAGTTGCTCGCGCGACAGGTC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TCGCGGTAGGTGCGCACGCGCCGGGTGCTGTTGG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TCCGCGTTGGTCGAGATCGCGCCGAACGTCGAGGC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CTCGTCCGCCATTGCTTGCTGCCTTTCGTGCGGT
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CTGCTGCCGTGCTTTCGCCTGGAGGCTGCTCAA
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CCCAGCTCGCCGGCGGCGCGGTACAGCTCGGC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TAGAGGGCGGGTATACGCACGTTAAGCCTGTCTG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CTGACGGGAGCAACGGGGTTGCTGTCCATGGCG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TTCGGCATGTTGGCGGACGGCCTGGGGCTGTAAT
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TGGGTCAAGCAGCGTCACGCCCAGGACCCCATC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	ACGAGGAAACCGCGCTCTTTGCGCATCCAAGCCCG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AACATCGGCACGCTCGAAGCCCCCAAGAACACCG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CCGCGCAACCTCTACTGACAACGGCGCGCCCTGGT
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GCGGTCACCGTCGAGCACTCGCGCCAGCTCGTT
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AATGGGCAGCGTCTACCTCTGCGGGGTGATGGA
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CTCTCCAGCCTGCTCCCGCGCGAGCTCTACGTGGGC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GATTACCGTCGGCCGCCCTGAAGACGACGAAGT
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AAGGTGGAGAGGATTCGCAAGAGCCCGCCATCC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GTCCCCTCGTCGAACACCTTCACGAGATTCTCGAC
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	AAGTAGTCGCACACTTGATCGATGGTCCACAGGCAT
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	TGGCGGGCGGTGGCGGAGGCAACGCGGGCCCACCT
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	CCGGCCGCGGAGCGGGTGTTGGTGCCGTTGGTG
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	AGCAACTCCAGCTTCGAGCGGCTCCACATGGACG
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	TTCACCCTGTGAGGCTCGACGTGGACTGGTGCT
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	AAGGGGCTGACGGGTGCGAACCCCGCGGGCCTC
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	CGGTCGAGCTTGCACAGGGAGACCTCACTCGCTGA
GTCGCTCCTCGTGAACGCGAGGGCGTGGGTTGAAACC	AGATTGACGACCGCAGCCATGGGGAGTGGCTC
GTCGCTCCTCGTGAACGCGGGGGCGTGGGTTGAAACT	TGCCCTTCTCCGGACCCTCGAAGGTCTCGATGAA
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	CGCCAACCGTTGAGGTCGAGCCCAGCCGCTTCGCGA
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	GCGTACGCCTCCACGTTGGGCGCAATCTCCACGA
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	CTTTCGGAACCGCGCAGCCTGCCGAACGCTGA
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	GCATGGCTGAGACGGGCGAGTATTTTCCGGGCAA
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	GTGCATGTCCCCGCTGAGTCTCTCATCGCTGCCTA
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CTGCACGATAGCATCCTCAAGACGCCGGGTGCTG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TCCAGCTTGTCGTGCTTGCCCACCATATGGACCAAG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TCCCGCGCACGATAGCCCAGCTCCAGCCGCCCG
GTCGCTCCTCGTGAGCGCGAGGAGCGTGGCTTGAAAC	GTACTGGTGGATTCGCTGCTGGAGCGCGACGCGCAGCG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TCTGACGAGGCGCCCCGCGAGTGGCTCCTCCC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GCCACACCTCCAGCGCGCGCACGCCACTGCTGGT
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TGCATGATGCCGTTGCGCAACTCTGCTGTGAGCG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TGGGCGCTGACGGAGGCAGTGGGGAACATCGAG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AGCAAACGACTGGACCGACAAGCCAACCATCGCAG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTAAAAC	GCGTTCTACTACGGGCCCTGGCAGTGCAAAGCCCA
GCCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AATCAGGATGCGGAGGCTCAAATCTTGGCCTGGG
GGCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CGCTCGGCATGGAGTACTGCGGCAGGCCGTGCAG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AGAGATGTGTCGCCTGGGGGCACGGAACTGCTCT
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GCGCGGAACGGGGCGCTCGTGCAGGTGGTCAAG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CGCGCGGCGAATCTCTACTCTGGGCACCGACTCA
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AAAAACGCGGGTTACATGAGCGGCCTCGCGGTGGA
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAT	CGATGCGGAAGGGGACTCGTACGAAGTTCACGCA
GTCACTCCTCGTGAACGCGAGGAGTGTGGGTTGAAAC	TGGGACAAGGCGAATGCGCTGGAGTTGCTGTCGAA
GTCGCTCCTCGTGAAAGTGAGGAGCGTGGGTTGAAAC	AACCAGGACGCCGAAGCTCAGATTCTGGCCTGG
GTCGCTCTTCGTGAACGCGAGGAGCATGGGTTGAGGC	CGCGTCGAGGTGCAGTGCTCGTCGGGCACGTC
GTCGCTTCTCGTGAGCGCGAAAAGTGTGGGGCGAACC

>NZ_CP012109|31|7|9240090-9245103|CRT
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CAGCCGCGCAGGGACGGGCAGCCGCAGATGATG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GGCTCGGTGCGACTCCAGAAGTTGCAGGGCGAG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GACCCGAACCAGTTGGTTGCGCAGGCCGAGCAGC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AACGTGGCTCTCAGCTTGCGCAAGCGGGAGAGCG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GTTGCCGGGCCTGCCGCCACGGACGCCGTGCTGGAG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GCCCGACGCGGGGCATCGAACGAGGGCACCTGGA
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AACGGCACTCCCATCCCGCCAGCGTCGCCGGAC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TTCGCGGGCGGGGTGGTGGTGGGCACCGCGGGC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	ATCGCTTCGTCTCCGTGGTGTTCGGTGTTCTGGCC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TCCGGACTGCGTTGAACAACCTCCGGGCCTGA
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CGCCCCCGGCATCCCCCGCGGCCTCGGCGGCGGCGTC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	ACCAAGCTGAACTCACAATCCAGGAGCTGCTCC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CCGAAGCCTCCCCCCTTCGGTGGCGGAGCGCCCGTGT
GTCGCTCCTCGTGAACGCGAGGAACGTGGGTTGAAAC	GGGCAAGGCGCCCCTGCGAGGCCCCACGGTGGGCC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CTGCATGGCCGCCACCAGCGGCGCGAGGTAGCCGC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AGCCCGACGATTGACCAGGACAACCCCACTCGGGCC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GTCGACCAGCCCTTGCACGCCCAGGTGCTCGCCCG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	ATCTCGGCGTCGAGGAGTTGCTCGCGCGACAGGTC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TCGCGGTAGGTGCGCACGCGCCGGGTGCTGTTGG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TCCGCGTTGGTCGAGATCGCGCCGAACGTCGAGGC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CTCGTCCGCCATTGCTTGCTGCCTTTCGTGCGGT
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CTGCTGCCGTGCTTTCGCCTGGAGGCTGCTCAA
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CCCAGCTCGCCGGCGGCGCGGTACAGCTCGGC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TAGAGGGCGGGTATACGCACGTTAAGCCTGTCTG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CTGACGGGAGCAACGGGGTTGCTGTCCATGGCG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TTCGGCATGTTGGCGGACGGCCTGGGGCTGTAAT
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TGGGTCAAGCAGCGTCACGCCCAGGACCCCATC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	ACGAGGAAACCGCGCTCTTTGCGCATCCAAGCCCG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AACATCGGCACGCTCGAAGCCCCCAAGAACACCG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CCGCGCAACCTCTACTGACAACGGCGCGCCCTGGT
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GCGGTCACCGTCGAGCACTCGCGCCAGCTCGTT
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AATGGGCAGCGTCTACCTCTGCGGGGTGATGGA
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CTCTCCAGCCTGCTCCCGCGCGAGCTCTACGTGGGC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GATTACCGTCGGCCGCCCTGAAGACGACGAAGT
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AAGGTGGAGAGGATTCGCAAGAGCCCGCCATCC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GTCCCCTCGTCGAACACCTTCACGAGATTCTCGAC
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	AAGTAGTCGCACACTTGATCGATGGTCCACAGGCAT
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	TGGCGGGCGGTGGCGGAGGCAACGCGGGCCCACCT
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	CCGGCCGCGGAGCGGGTGTTGGTGCCGTTGGTG
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	AGCAACTCCAGCTTCGAGCGGCTCCACATGGACG
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	TTCACCCTGTGAGGCTCGACGTGGACTGGTGCT
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	AAGGGGCTGACGGGTGCGAACCCCGCGGGCCTC
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	CGGTCGAGCTTGCACAGGGAGACCTCACTCGCTGA
GTCGCTCCTCGTGAACGCGAGGGCGTGGGTTGAAACC	AGATTGACGACCGCAGCCATGGGGAGTGGCTC
GTCGCTCCTCGTGAACGCGGGGGCGTGGGTTGAAACT	TGCCCTTCTCCGGACCCTCGAAGGTCTCGATGAA
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	CGCCAACCGTTGAGGTCGAGCCCAGCCGCTTCGCGA
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	GCGTACGCCTCCACGTTGGGCGCAATCTCCACGA
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	CTTTCGGAACCGCGCAGCCTGCCGAACGCTGA
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	GCATGGCTGAGACGGGCGAGTATTTTCCGGGCAA
GTCGCTCCTCGTGAACGCGAGGGGCGTGGGTTGAAAC	GTGCATGTCCCCGCTGAGTCTCTCATCGCTGCCTA
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CTGCACGATAGCATCCTCAAGACGCCGGGTGCTG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TCCAGCTTGTCGTGCTTGCCCACCATATGGACCAAG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TCCCGCGCACGATAGCCCAGCTCCAGCCGCCCG
GTCGCTCCTCGTGAGCGCGAGGAGCGTGGCTTGAAAC	GTACTGGTGGATTCGCTGCTGGAGCGCGACGCGCAGCG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TCTGACGAGGCGCCCCGCGAGTGGCTCCTCCC
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GCCACACCTCCAGCGCGCGCACGCCACTGCTGGT
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TGCATGATGCCGTTGCGCAACTCTGCTGTGAGCG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	TGGGCGCTGACGGAGGCAGTGGGGAACATCGAG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AGCAAACGACTGGACCGACAAGCCAACCATCGCAG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTAAAAC	GCGTTCTACTACGGGCCCTGGCAGTGCAAAGCCCA
GCCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AATCAGGATGCGGAGGCTCAAATCTTGGCCTGGG
GGCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CGCTCGGCATGGAGTACTGCGGCAGGCCGTGCAG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AGAGATGTGTCGCCTGGGGGCACGGAACTGCTCT
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	GCGCGGAACGGGGCGCTCGTGCAGGTGGTCAAG
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	CGCGCGGCGAATCTCTACTCTGGGCACCGACTCA
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC	AAAAACGCGGGTTACATGAGCGGCCTCGCGGTGGA
GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAT	CGATGCGGAAGGGGACTCGTACGAAGTTCACGCA
GTCACTCCTCGTGAACGCGAGGAGTGTGGGTTGAAAC	TGGGACAAGGCGAATGCGCTGGAGTTGCTGTCGAA
GTCGCTCCTCGTGAAAGTGAGGAGCGTGGGTTGAAAC	AACCAGGACGCCGAAGCTCAGATTCTGGCCTGG
GTCGCTCTTCGTGAACGCGAGGAGCATGGGTTGAGGC	CGCGTCGAGGTGCAGTGCTCGTCGGGCACGTC
GTCGCTTCTCGTGAGCGCGAAAAGTGTGGGGCGAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_044889914.1\|9249591_9250056_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044889916.1\|9246734_9247448_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|283403
NZ_CP012109.1\|WP_144429683.1\|9231163_9231739_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_049872435.1\|9230285_9231038_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237512
NZ_CP012109.1\|WP_144429684.1\|9245190_9245538_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002633754.1\|9254729_9255419_-\|response-regulator	unknown	unknown	gnl\|CDD\|381085
NZ_CP012109.1\|WP_002633773.1\|9235224_9236973_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|273839
NZ_CP012109.1\|WP_044889919.1\|9234568_9235228_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NZ_CP012109.1\|WP_002633758.1\|9248280_9249447_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|184118
NZ_CP012109.1\|WP_002633780.1\|9229458_9230172_-\|esterase-family-protein	unknown	unknown	gnl\|CDD\|227283
NZ_CP012109.1\|WP_044889997.1\|9255792_9256152_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002633767.1\|9238579_9239608_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP012109.1\|WP_002633755.1\|9251878_9254725_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002633769.1\|9237922_9238567_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP012109.1\|WP_193409827.1\|9245688_9246753_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044889918.1\|9239607_9239907_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP012109.1\|WP_044889915.1\|9247483_9248077_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_044889920.1\|9232330_9234547_+\|CRISPR-associated-endonuclease-Cas3''	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_CP012109.1\|WP_002633756.1\|9250052_9251882_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002633771.1\|9237011_9237926_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|274216

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_044889916.1\|9246734_9247448_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|283403	pfam05728, UPF0227, Uncharacterized protein family (UPF0227). Despite being classed as uncharacterized proteins, the members of this family are almost certainly enzymes that are distantly related to the pfam00561.	9.56653e-14
NZ_CP012109.1\|WP_002633754.1\|9254729_9255419_-\|response-regulator	gnl\|CDD\|381085	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs). Two-component systems (TCSs) involving a sensor and a response regulator are used by bacteria to adapt to changing environments. Processes regulated by two-component systems in bacteria include sporulation, pathogenicity, virulence, chemotaxis, and membrane transport. Response regulators (RRs) share the common phosphoacceptor REC domain and different effector/output domains such as DNA, RNA, ligand-binding, protein-binding, or enzymatic domains. Response regulators regulate transcription, post-transcription or post-translation, or have functions such as methylesterases, adenylate or diguanylate cyclase, c-di-GMP-specific phosphodiesterases, histidine kinases, serine/threonine protein kinases, and protein phosphatases, depending on their output domains. The function of some output domains are still unknown. TCSs are found in all three domains of life - bacteria, archaea, and eukaryotes, however, the presence and abundance of particular RRs vary between the lineages. Archaea encode very few RRs with DNA-binding output domains; most are stand-alone REC domains. Among eukaryotes, TCSs are found primarily in protozoa, fungi, algae, and green plants. REC domains function as phosphorylation-mediated switches within RRs, but some also transfer phosphoryl groups in multistep phosphorelays.	3.19485e-19
NZ_CP012109.1\|WP_002633773.1\|9235224_9236973_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|273839	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein that tends to be found near CRISPR repeats of the DVULG subtype of CRISPR/Cas locus. We designate this family Csd1 (CRISPR/Cas Subtype DVULG protein 1). The species range for this subtype, so far, is exclusively bacterial and mesophilic, although CRISPR loci in general are particularly common among archaea and thermophilic bacteria. In a few species (Xanthomonas axonopodis pv. citri str. 306 and Streptococcus mutans UA159), homology to this protein family is split across two tandem genes; the trusted cutoff to this family is set low enough to capture at least the longer of the two.	0
NZ_CP012109.1\|WP_044889919.1\|9234568_9235228_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.08478e-94
NZ_CP012109.1\|WP_002633758.1\|9248280_9249447_+\|AAA-family-ATPase	gnl\|CDD\|184118	PRK13531, PRK13531, regulatory ATPase RavA; Provisional.	4.10611e-39
NZ_CP012109.1\|WP_002633780.1\|9229458_9230172_-\|esterase-family-protein	gnl\|CDD\|227283	COG4947, COG4947, Uncharacterized protein conserved in bacteria [Function unknown].	1.27206e-76
NZ_CP012109.1\|WP_002633767.1\|9238579_9239608_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP012109.1\|WP_002633769.1\|9237922_9238567_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	6.77229e-39
NZ_CP012109.1\|WP_044889918.1\|9239607_9239907_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	9.58539e-27
NZ_CP012109.1\|WP_044889920.1\|9232330_9234547_+\|CRISPR-associated-endonuclease-Cas3''	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	6.69312e-50
NZ_CP012109.1\|WP_049872435.1\|9230285_9231038_-\|hypothetical-protein	gnl\|CDD\|237512	PRK13800, PRK13800, fumarate reductase/succinate dehydrogenase flavoprotein subunit.	1.55437e-05
NZ_CP012109.1\|WP_002633771.1\|9237011_9237926_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|274216	TIGR02589, conserved_hypothetical_protein, CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csd2 protein of the Dvulg subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02590, the Csh2 protein of the Hmari CRISPR subtype.	7.52114e-160

>NZ_CP012109.1|WP_044889918.1|9239607_9239907_+|CRISPR-associated-endonuclease-Cas2
MRKLTVLICYDVRVSDPQGARRLRKIARACKDHGVRVQYSVFECVLEPKDWVVLRARLLAAFESECDSLRFYFLSEDDARKTEHHGARPPLDVEGPLVL
>NZ_CP012109.1|WP_002633767.1|9238579_9239608_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MTTALNTLFITAEGTRLNKEGECVVVTVQEQKKAEVPLRHLRSVVCLTRAWLTPELMESCLEAGIHVSFFGMTGRFLARVEGVPGGNVLLRRQQYRAADDAARSLAISRAMVLGKLGNARAFVLHARRDAAAERQEVLSETARRLSEHLRALVRAEELEQVRGLEGIAARDYFEAFPALLKKSASGFEFDGRNRRPPRNPLNAMLSFGYALLAQDCAGALAGVGLDPAVGFLHEDRPGRLSLALDLMEEFRAPVVDRLVFSLVNRGQLKLGDFRTESAGAVLLKDDARKTFLVAYQEAKQVSVRHAFLGQETTWGMAPHLQALLLARNIRGELDGYPPFAMR
>NZ_CP012109.1|WP_002633769.1|9237922_9238567_+|CRISPR-associated-protein-Cas4
MSPDRETWVALSALQHLLYCERQAALIHVERQWREDVNTASGRLLHERVDLPGHDARPGRRVERAVLLGSQRLRVSGRADLVEYQREPTLPSGWRPFPVEVKRGRHKALDADAVQLCAQALCLEEMHGVEVPEGALFYGTQHRREAVRFDARLRLRTEEAIARMHALLQRQEVPAVPRAPRCDKCSLEPLCLPHVTAGQRRVHDHLSRWVDEEG
>NZ_CP012109.1|WP_002633771.1|9237011_9237926_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MTELKQRHDFVLFFDVLDGNPNGDPDAGNLPRIDAETGHGLVTDVSLKRKVRNFVLLTQEGKPGLDIFVKEKAVLNQRIADAYKGLGIDLSEKPSRAEDGKKRNKPGEAQGSEVEKGRAWMCKTFFDVRTFGAVMSTGPNAGQVRGPMQLTFARSVDPIVSQEHSITRMAVATEAEAEKQGGDNRTMGRKNTVPYGLYRAHGFVSPHLAKQTGFGTADLEMLFQAFTHMFELDRSAARGLMSMRKVVVFKHGSELGNAPAHALFDRVHADRKQRDKPARSFSDYTVSVDKAGLPQGIEVLELVG
>NZ_CP012109.1|WP_002633773.1|9235224_9236973_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MMLTALNDFARERGLTDDPLYEVKPVDFFVRISAKGKFVALESTAGEDGRGKPMPVPRLPQRSVNIAAGFFADNPKYVLAYEKEEPKTKAGGVEKRLARLEAFLKSVREVAAETKDPEARAVEAFLANEAERRKVLAERDAEEWTGSEMLVFVVGDATTPVHQNPWVRACWARRSGEQRAQGRKALCLVTGREGVVAVTHPKLKNIPEAQSSGAALVSFNAPAFSSHGLEQGDNAPISQEAALGYVLALNDMLRRTEQRRFRQGIQLADGSVMVFWTRASASEESLLLSWADPTEADLQRFAESPLRGLEPGKLDDRAFYAVTLAGNAGRVAVRDWFESRVGEVKQNIRRYFEDLRIGNAPAGPIPVYRLLKAVEAPSGRGLSPDVATRMFGAALRGQPFPRQLLAASLDRLRLPPSDERFEREQLRLRVALIKATLLRLPRSGTAPLEVTVSLDKSNDSQPYVLGRLFAVLERLQGAALKDLNATIRDRYFGAASRNPVTVFPRLIQLSVHHASKAGENGRWLERVKGEVMALLPSESPFPPVLDLKDQGLFAVGYYHQREAFFTKREATATPAEAEASST
>NZ_CP012109.1|WP_044889919.1|9234568_9235228_+|type-I-C-CRISPR-associated-protein-Cas5
MTSTADRRFRVRARGPVACFTRPEMKVERVSYEVMTPSAARGVLEAILWKPAIRWHIHEIAVLAPVRWTSFRRNEVNSKATVGKFDYAADEDRAQRNTVALRDVDYVITASFTLVPGKTGPEDNARKFEDMFERRLERGQSFHAPYLGCREFAARVEPAERGLLPHESGQGRRPLGLMFYDFVFDVPGEPVRPEFFQAFLEDGVLRVPPRAQVLGGGVP
>NZ_CP012109.1|WP_044889920.1|9232330_9234547_+|CRISPR-associated-endonuclease-Cas3''
MTKPRVVTNEPLAHVTEDCRPHLLREHLEAVGQWAARLAPREDLRAPALAAGRWHDLGKYTQDFQFRIRKENGFEAHLEKEGALERDHSTAGALWALSQDRRLLPLALAIAGHHAGLPDLPKFKERVGRDEKQALLADARARCDSPSLLNEPLGFSPETLVKLEPRQLELWTRMLFSVLCDADFLDTEAFFDASRGAAREVPVSLSQLSARLREFLDEKQRGAPDTEVNRVRREVLAAAVEAASQQPGVFSLTVPTGGGKTLTSMAFALEHARAQGLERVIVAIPFTSIIEQSAEAYRQAFQGLEHAVIEHHSAVDPDKETPLNRVASENWDAPVIVTTTVQLLESLFARRPSACRKLHRVARSVIVLDEAQTLPASLLEPILDGLGALVKDYGCSVIICTATQPALSRRPDFPEGLPEAREIVPASIRAFERLRRVRVRWPTSGRKLPYAELADAVAAERDVLAVVHLRADARRLCELVDERLGHEETLHLSALMCPEHRSKVLADIKARKRRGEPVRLVATQLVEAGVDLDFAVVYRGLGGLDALAQAAGRCNREGMLEGLGELRVYEPETQPPKGVSRAAQDVTRGLLAQSSDLDLFSPESFQRYFTRLYATRRLDEKGIQALRAKLHFEEVAQAFKLVEDDWSASVVVPYADCAPLLEALRVLGPSRERMRALQRFTVTVPRKLRDAWLARELARLAAETVAYLGPEHASVYDKRFGLLLDRVGIFDPAFLIPD
>NZ_CP012109.1|WP_144429683.1|9231163_9231739_+|hypothetical-protein
MQQLLLTPVRNQVWQGEQQGFRGTAVERRMGARDSSQFVARDAPVHSNQVPFQLLRAHVLTPLGEQVPGFGPLLPCEGDAEVEAFVGVHLLVNGVTVGVVPAFEQPLRERMRLSNDDLFGGGESKGMAVESGHARALRLCAFRGLRGALDAPLHDEQSAAAAGLQLEERRLQVWTECRQPYEGEEVDQAES
>NZ_CP012109.1|WP_049872435.1|9230285_9231038_-|hypothetical-protein
MLYPLLCDADVAPQVRSHLLEHLSDHDRPAAVRWACIAERYPGNEPLTGTVVQHAALNTPTPEDRPLFLCALRNPDARIRGLAIEGLLALGESGPAWVDRLLSLAHEPHPEVRIPAAAGLVQQGQREWLTPLQQLTVDAPTPFLRAEALRWLGLLDGNASRSLFLQVLASAPSHKGSSHHCICCPCLPTGFSPEVEAAIEALSRRGTDEDLSALLDAGVRLGCTLQLEELWAHHLARRGVRMNCNELPTG
>NZ_CP012109.1|WP_002633780.1|9229458_9230172_-|esterase-family-protein
MNREYHRWYSERLHRDMEMLVFGHSGEPVLLLPTSKGRFFQAEDFGLIGAIADRIQSGRYIVMCPDSVDEESWFNTAAHPADRVRRHQQWEDYLLHEAVPLLKSRSTGGRLTLAGCSFGGFHSYNIGLRHPHVFRRLLSMGGKFETNEFLDGHHDSDVYFHSCTEWLPNLTDPAQLSALQRVEMVLAVGEHDFCRPSNEHLSKLLWKKDIGNHLAVWQGGTHDWPVWRQMIQQYLPW
>NZ_CP012109.1|WP_144429684.1|9245190_9245538_-|hypothetical-protein
MQRITERITCENPGLTPIELWLEPSGMCFSIPASGRLEITCEGPLGGRIEIERHPEGHLAVYSWPSAGFTVFQNGVEIYNEKGINPFPSLEKASLRQVIEALFGDFDERRRMRSS
>NZ_CP012109.1|WP_193409827.1|9245688_9246753_+|hypothetical-protein
MTRVHHIAVVILLACPLLGAAPAVPKTGNPKPVAPKKVTPVKPAPTWRFELFHQVDRGNPNAGSDVHIDPDGKQYGMGKADYRPFIERCELVPPSGFDPLSAKLVFLPYFREQKPETTLGDYFKAQAIKGATLREMFPRDLEGFLRHPEDIRDSFSTLVEPKSQPMSLLVIWNPEGQWYVDEVFYRIEGIDGWQRQACSDVVEGSFEDFRRHFPLLQPRLDEGLSPLQHPTRRKHRFSADAPAIRLEKSPGMPNTRHYWLHVFEDGRFTLSGSRKAEVNSTDASRLTTLLIAASRLGEHEDFLGVPLSQAHDRQMTTFEFSVEGRRTRVTLGSDTPPDILRFMQQVAAAYGIGL
>NZ_CP012109.1|WP_044889916.1|9246734_9247448_-|alpha/beta-fold-hydrolase
MSTSTPSTSVGPRWLYLHGFASGPDSAKGVAVARHYAGQGVHVERLNLRVPSLEQLRLSAILETVRAAMGGPEERVVLLGSSLGGLTAARMAEQDARVCALVLLAPAFRVVPQLRRRMGEAAWQHWQTSGWIETDDFVTKQKVRIHSGFIADAEAVDARTGGWPDVRVPTLIIHGVQDDTCDVRNSRQWAEGKRHVRLVEVADGHELTASLPRILEETESFLQPWGARGPGAQSPMP
>NZ_CP012109.1|WP_044889915.1|9247483_9248077_-|hypothetical-protein
MRKQSMWVAVVGVLCVGSEGLAAGWNGYASLGAGITLDHLSNFRTKGPALHGYLGVEMPQGLSVGLLAEISETWGQQFPDAMRSGQLERAQLDYRAVGIEARLRFFKDKPITPWVGARLSKSWGSTFTPDDVGTWMRENIDTTSMAFRVGIDGWFSQRWGVSVSTGFQFCDVKLTANTLQQCAKLMQSVIAGPVARF
>NZ_CP012109.1|WP_002633758.1|9248280_9249447_+|AAA-family-ATPase
MSSSFESAASSVRDALTGAGRGLVEREAMVELITLSAVAGEHLLVVGPPGTAKSEAVRRTARALGGAYYEYLLGRFTEPSELFGPVDLRKLREGLVETVTQDMLPEADVAFLDEVFLGSTAILNTLLGILNERTFRRGHTRMQCPLRVCVGASNALPEDASLAAFADRFLARIFVEPVPDSRLEELLAGGASLWDEGSVPTASLASLDVIAQVAREADLSEVRPHLAHALRALRTAGVILSDRRAVKVQKLIAAAAALAGRRTPGTADLWPLVYAIPTKEGQALARDVLRDALAGTENAALPAAALEASAGPLARARRIANAGQQLLAERPSAEGPLAAWRLKLEGVAREMDAGFSAETLPDDLKVLRAELASVLAAGSETPGVEVTV
>NZ_CP012109.1|WP_044889914.1|9249591_9250056_+|hypothetical-protein
MASTRNEATLHWHPRSEPLEPLAVVGEGAVAVALARRVLAEDDARLAAWEGVAGPGVLVLLGASESLPWVDGAVYLGRDADAPSLLLPCAVAPGVAVSLLEHAFLARAEGGAPLAVLPASLHLVSVGAARSVSRTTLVAWLEEGQSGVPPGDTP
>NZ_CP012109.1|WP_002633756.1|9250052_9251882_+|hypothetical-protein
MTALPHALRPWAATLSQLPLELALHLGPLVARLSVALGATRVPTEMMGGEPQGYDGLSRRGTLDRLLVSEWLWALEDPDELVRRAAFGELSYLQPSFRQPRSEKRMVALLDAGPDQLGAPRIAHLALLIVLARRAEAEGAAFLWGILQADPGKGHFPDVTPSSLREWLDARSLEPPTAERLAAWRQALAADTDAVEAWLVGAPRLSRLPGAETLSRVEIAEVMAPEVRQLAVEVHPIARGPRSVLLDLPPPADSVRLLKASFEPEPRAPVAASVRRLRAPRVRAFSFSSDGQRLMLFHEDGGVGAMALPQSAGATVPNPTRMKPLDREEFLGAGWRAGMGMFVLCRGAYGYRVRGQLRRLGVRRQPAHFPWTMRDTDVHPPKLKREQSPGRLTSYYDSQGQLCLLLSGLDENLYLFDHVRTDHALRVTSERVAKGVLTVATVKDRCVPVMRTGPEGVALGTVGMKEVRQVPLPDSAGGAVFFGAAEGGVGHPEHGLLAVNQRPGLWHLHQQGTARPVQLASGLRAVGAGVCHPSRAQAGLVALDSDQRAFWCVGPQNQYKLTVAEARVVHAEVSHAVPVLAWLTVEGELVLFHLREESVLYRLRVGGGA
>NZ_CP012109.1|WP_002633755.1|9251878_9254725_+|hypothetical-protein
MSAALRPRQHVHRGTVRAWAFWFEPALMGEAEARRRILAMWTPTVSVRAVAGGYLVGLSAPREVRCSDAPGWVLTREHGVLTSAPLSPAEWRHASLHEGAGVLVLGGRAQVFSVEALPRVNVAAWLDVSAWTCVAVKTLAAPPPPVAVLAPVPAPSRARFGANIPEPSPEAQAMFARMEGRAPPPNVAAHRVGWWERLRARFARDGSVLRVGPGVAHGPPGWLARLRAAFALGGAGGPADAGTPGLLARWLGKLRKPAKGTVPRALPASTAVPPKGPGPWSRLSGWMMRNTLLGVWVQQRRAEYMRRLLEMFEEGNLREAMRHAIPLSKAGSATAREALGLPGPREQLTLRLGPKDPATVFDGAPDVLAALQQRYREAFRRFEREGRIDEAAFVLTELLGAHEEAVSFLEKAGRFQLAAELAESRKVAPGLVVRQWFLAKDVGRAVAVARLSGAFSDAVARLERTNSAEARALRLHWAETLAASGDFARAVQVVWPVPELRERARGWLERGVAVGGATGARLLAFWATAFPDGLAAVGARVRELLEEEGLGRATERFVFGLALMGEPHSAQRAALAVPTLRALLRDRAAGSARFTSDLDLIKRLLSAAPDATLSTDLPSLPDCVHPAWRDDRSLPRIEATLRASEAGTFTLHDAVVLPDGRLLYALGEAGARLVRADGRLVARFDVPAFHLVLSLHGDRALALARRGDVWRLSRLDLSTRRGAFWCDAALNAWAPVYDGSVWFASVENTVLMVDSLAADFRALWRVTDLPLRVSAMAVDSVHLSFLAGFRERWTYALDQGPTLRSRVDLPWGEADAPILMSSLVTAAVTPDGEAAARLTVVAPPEDIARRAVVRPTSVRGVQRPPFDNPACEDIFLTASWCVELMHSHGEWQAQLTDTRGVSRAVLTFQGDVRPQVRLTEGTLLVFDGAGRGLWVDLESGEVRHLPVP
>NZ_CP012109.1|WP_002633754.1|9254729_9255419_-|response-regulator
MSRPLQHMLLVEDDLAWRERLDVVAREEGVQVTHAADGQEALDWLCTRPRASHPDLILLDLLLPRMDGWELYGQLRTNARLRHLGVLMFSGALNGKEPPLDGVVGYLRKPHAPEAMDLALRAQLRGLPELPTRASSEPYALQLPEDVCLPLRTLPSALGHAVRLHLLRAAELVGTELPLASTWLMALPGTPPSLLVTVEGVQVVLEVDDAQRRLTASEVSLAPGLFNGA
>NZ_CP012109.1|WP_044889997.1|9255792_9256152_+|hypothetical-protein
MALEADVKHALRVQLVVTVPARQSESTMALRLQLAPRALRTLADCSTPVRQKLQCELGALAAGLPLDGPLMPDQDGSVVLDSGFRVRYELDLGRGLLRLTHVAAPSSPLPWPDVPPVDP

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Crispr_ID: NZ_CP012109_32

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012109_32

9440526-9440608

Orphan

Consensus_repeat	Method
CGCTCATGCGGAGGCAGTGCGTCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012109_32

>merge|NZ_CP012109|32|9440526-9440608|CRISPRCasFinder
CGCTCATGCGGAGGCAGTGCGTCGGCGGGATTACCGATGCGTCCGAGCCCGGCGCGCACGCTCATGCGGAGGCTGTGCGTCGG

>NZ_CP012109|32|25|9440526-9440608|CRISPRCasFinder
CGCTCATGCGGAGGCAGTGCGTCGG	CGGGATTACCGATGCGTCCGAGCCCGGCGCGCA
CGCTCATGCGGAGGCTGTGCGTCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012109.1\|WP_002637981.1\|9436385_9437513_+\|HupE/UreJ-family-protein	unknown	unknown	gnl\|CDD\|379373
NZ_CP012109.1\|WP_002637987.1\|9442631_9443288_+\|LON-peptidase-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|366967
NZ_CP012109.1\|WP_002637979.1\|9434445_9435033_+\|putative-glycolipid-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|377662
NZ_CP012109.1\|WP_002637988.1\|9443370_9445263_+\|NAD(+)-synthase	unknown	unknown	gnl\|CDD\|237577
NZ_CP012109.1\|WP_002637977.1\|9433099_9433684_+\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|376792
NZ_CP012109.1\|WP_044889880.1\|9448952_9449840_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637974.1\|9430500_9431403_-\|general-secretion-pathway-protein-GspE	unknown	unknown	gnl\|CDD\|274186
NZ_CP012109.1\|WP_002637991.1\|9447141_9447519_+\|thioredoxin	unknown	unknown	gnl\|CDD\|239245
NZ_CP012109.1\|WP_044889879.1\|9449957_9452705_+\|TonB-family-protein	unknown	unknown	gnl\|CDD\|238657
NZ_CP012109.1\|WP_002637975.1\|9431727_9432468_+\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|376576
NZ_CP012109.1\|WP_002637990.1\|9446803_9447127_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|223619
NZ_CP012109.1\|WP_002637992.1\|9447709_9448945_+\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|223715
NZ_CP012109.1\|WP_002637976.1\|9432587_9433076_+\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|376792
NZ_CP012109.1\|WP_044889881.1\|9445353_9446661_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP012109.1\|WP_044889883.1\|9435168_9436389_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP012109.1\|WP_002637985.1\|9440878_9441889_-\|alpha/beta-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|370661
NZ_CP012109.1\|WP_002637986.1\|9441949_9442585_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012109.1\|WP_002637978.1\|9433768_9434428_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223620
NZ_CP012109.1\|WP_044889882.1\|9437917_9440458_+\|MASE1-domain-containing-protein	unknown	unknown	gnl\|CDD\|236901
NZ_CP012109.1\|WP_002637982.1\|9437558_9437780_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012109.1\|WP_002637987.1\|9442631_9443288_+\|LON-peptidase-substrate-binding-domain-containing-protein	gnl\|CDD\|366967	pfam02190, LON_substr_bdg, ATP-dependent protease La (LON) substrate-binding domain. This domain has been shown to be part of the PUA superfamily. This domain represents a general protein and polypeptide interaction domain for the ATP-dependent serine peptidase, LON, Peptidase_S16, pfam05362. ATP-dependent Lon proteases are conserved in all living organisms and catalyze rapid turnover of short-lived regulatory proteins and many damaged or denatured proteins.	6.35979e-28
NZ_CP012109.1\|WP_002637981.1\|9436385_9437513_+\|HupE/UreJ-family-protein	gnl\|CDD\|379373	pfam13795, HupE_UreJ_2, HupE / UreJ protein. These proteins contain many conserved histidines that may be involved in nickel binding.	6.27068e-45
NZ_CP012109.1\|WP_002637979.1\|9434445_9435033_+\|putative-glycolipid-binding-domain-containing-protein	gnl\|CDD\|377662	pfam06475, Glycolipid_bind, Putative glycolipid-binding. This family has a novel fold known as a spiral beta-roll, consisting of a 15-stranded beta sheet wrapped around a single alpha helix. It forms dimers. It has some structural similarity to the E. coli lipoprotein localization factors LolA and LolB. Its structure suggests that it may have a role in glycolipid binding. Its genomic context supports a role in glycolipid metabolism.	8.96602e-58
NZ_CP012109.1\|WP_002637988.1\|9443370_9445263_+\|NAD(+)-synthase	gnl\|CDD\|237577	PRK13981, PRK13981, NAD synthetase; Provisional.	8.60127e-106
NZ_CP012109.1\|WP_002637977.1\|9433099_9433684_+\|biopolymer-transporter-ExbD	gnl\|CDD\|376792	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR. This group of proteins are membrane bound transport proteins essential for ferric ion uptake in bacteria. The Pfam family consists of ExbD, and TolR which are involved in TonB-dependent transport of various receptor bound substrates including colicins.	9.79088e-13
NZ_CP012109.1\|WP_002637974.1\|9430500_9431403_-\|general-secretion-pathway-protein-GspE	gnl\|CDD\|274186	TIGR02538, Type_IV_pilus_assembly_protein_PilF, type IV-A pilus assembly ATPase PilB. This model describes a protein of type IV pilus biogenesis designated PilB in Pseudomonas aeruginosa but PilF in Neisseria gonorrhoeae; the more common usage, reflected here, is PilB. This protein is an ATPase involved in protein export for pilin assembly and is closely related to GspE (TIGR02533) of type II secretion, also called the main terminal branch of the general secretion pathway. Note that type IV pilus systems are often divided into type IV-A and IV-B, with the latter group including bundle-forming pilus, mannose-sensitive hemagglutinin, etc. Members of this family are found in type IV-A systems. [Cell envelope, Surface structures, Protein fate, Protein and peptide secretion and trafficking].	2.3096e-21
NZ_CP012109.1\|WP_002637991.1\|9447141_9447519_+\|thioredoxin	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	3.29834e-36
NZ_CP012109.1\|WP_044889879.1\|9449957_9452705_+\|TonB-family-protein	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.4339e-21
NZ_CP012109.1\|WP_002637975.1\|9431727_9432468_+\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|376576	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family. This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.	2.24697e-22
NZ_CP012109.1\|WP_002637990.1\|9446803_9447127_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|223619	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones].	2.85225e-52
NZ_CP012109.1\|WP_002637992.1\|9447709_9448945_+\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.72536e-43
NZ_CP012109.1\|WP_002637976.1\|9432587_9433076_+\|biopolymer-transporter-ExbD	gnl\|CDD\|376792	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR. This group of proteins are membrane bound transport proteins essential for ferric ion uptake in bacteria. The Pfam family consists of ExbD, and TolR which are involved in TonB-dependent transport of various receptor bound substrates including colicins.	4.19896e-15
NZ_CP012109.1\|WP_044889881.1\|9445353_9446661_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	5.17689e-05
NZ_CP012109.1\|WP_044889883.1\|9435168_9436389_+\|hypothetical-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	2.73123e-05
NZ_CP012109.1\|WP_002637985.1\|9440878_9441889_-\|alpha/beta-hydrolase-family-protein	gnl\|CDD\|370661	pfam09752, DUF2048, Abhydrolase domain containing 18. The proteins in this family are conserved from plants to vertebrates. The function is unknown.	3.22471e-62
NZ_CP012109.1\|WP_002637978.1\|9433768_9434428_+\|HAD-family-hydrolase	gnl\|CDD\|223620	COG0546, Gph, Predicted phosphatases [General function prediction only].	2.11677e-49
NZ_CP012109.1\|WP_044889882.1\|9437917_9440458_+\|MASE1-domain-containing-protein	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	3.04053e-48

>NZ_CP012109.1|WP_044889882.1|9437917_9440458_+|MASE1-domain-containing-protein
MAPMDTCRVGGWVSGGWVIFGLLRANARGVQGRHLLEMLGLAVVYLAAGGLGQKVAIVGNISPAWPPAGVALAALVVLGVSRWPGVFVAATVMALLSGVPFLSAVGVGLGNTLAAVLGAWLLRRVDFDTSLERIRDVVALCAGAGVLCLGVGAAVGATSLVLSGRLAWESLAVGLRVGWVGDLMGVLVVAPPLMLFRRCERPRRFSEAVGLAGLTSLLCCTVFFIPDLPRSAAHAATFLLFPMSAWAALRFGPRGTAAATLCIAAASIVGTARDHGPFSTDDLTQDLLVLQLFIAANAVTGLLLAAVSTERQRAVGQLQLLATTVRGVHEGVLIAEVRDGGALRTVFANQALCSLLGYRLEDLLGEDPCTLYGAQGLEFRQRTRQSLLAGEPVFAEVQLLRKDGGLVSSEVLLSPVRASDEDVTHFVATHRDISATKELQARLVAAERVAAVGTLAAGVGHEINNPLAYLVLNLESAERNLTQGGMAGTRDAMASVRSALEGAERIRLIVRDLQVFSRQGNQDRGVVDLNALVPPAVRIISHALRHRARLVEEFGPVPRVSGSEARLGQVLLNLLVNAMQAIPEGNPSMNEVRVRTSTDATGWARVDVVDSGAGIPAHVLPRIFEAFYTTKSSGEGTGLGLAICQQIIRSHGGELEVRSEPGRGSVFSVLLPPARVQVATPPRPLPRVSPPPAPSKVRRGRVLVVDDEPRLAQSMRLLLEPYHDVVTTTRGGEALALVDAGHRFDVILCDLQMPETDGSAVYQHLCAHAPDQASRVVFISGGAYTPESRAFIDSVPTRVLEKPVRPDVLMGTVDAAMAAAEALASDVSSDGVVAEPTVAVASGTRH
>NZ_CP012109.1|WP_002637982.1|9437558_9437780_-|hypothetical-protein
MSRPALAALLSFLIPGVGQIYNGDLFRGLFWLIITPGFWIGTGGCLGWVCHIVAAVTAHNRAEDKTKYRITVV
>NZ_CP012109.1|WP_002637981.1|9436385_9437513_+|HupE/UreJ-family-protein
MSRMAALSLLLVSLSAQAQKPSDSYLHLIDKGGAIAGRWDVALQDLDEVLGLDAGGDGAITWGEVLARQADIRRYVLGRLALGADGQPCELVARDSLRIAQHSDGAYAVVAFDARCAAPVTRLDVDYSLLFDSDPQHRGIVRVGAAEEGAPLIFSASQHFARVRLRGASPWRMTGHMVVEGAVHVMTRVDHLLFLVALLLPAVLRRAPDGRWEEVSDYRLALWDLVMGVSAFTMAHALTLAAATLGWVSPPPGFTAFAIALSLLVLALDNLRPLGWGVRWVAVFVLGLLHGFGFASVLAGWGLSAGSLTLALLGFNLGVELGQLVWVAAFLPLAFALRGSALYRRAVLGGGSAAIALLAGFWLAQRVLGLGVSVT
>NZ_CP012109.1|WP_044889883.1|9435168_9436389_+|hypothetical-protein
MRVPTRRRSAARHAVVILATAWGLACGPTPPAREQEPFIPRSESVVLARVPAVERDARARERAALRKALSLHAGQLDVALRLARMDLEWSQSQGDLRYLGRAQAALSPWWDSATPPPGVRMLRASIHHARREFAEARVDLDAVVKEDPGNVKAWLLRAEVLGVQGEHLEAARSCNWLTALTSPLSIAVCEARVRSLSGHSRKAHARLAEVLGRTGRSQESQTRVLATLAESAALAGDAGKAERYFLRALALNPRDTTARAAFADLLLDAGRAREASVVVMDHTQDDRLLLRRVLAENVLSSSRAPALTRELVRRFEDRRLRGDGVHAREEARFALHVEKAPEKALRLAQAAWATQREPWDVRLLIEAALAAGKPEAAQPALDFLRDTGCEDPWLVRWAERARSEAP
>NZ_CP012109.1|WP_002637979.1|9434445_9435033_+|putative-glycolipid-binding-domain-containing-protein
MTSSLLPRRLRALVWRRMISPGSEYFELRQHTEGWELTGSVVVVLEGQPYFVDYTLLTDAAWETRDVSVVRRSVEGEARLHLRSDAEHRWWNEGTELVELRGCPDIDLACTPSTNTLPIRRLALEVGQSAHVRTAWIRMPDLSVEVLPQQYTRLSPTRYRYESNGGSFKAEVDVDALGLVTNYPPGWERVAVSGE
>NZ_CP012109.1|WP_002637978.1|9433768_9434428_+|HAD-family-hydrolase
MLLRAVIFDLDGTLVDSLGDIADATNHALTLHGLPTHPESAYLRFVGSGVRELIRRAVPAGREDLLEPVLASYKAYYDDHLFDRTAHYPGIPEMLTALAGDGARMAVLSNKSDDFVKRLVARLLPGVPFAAVYGERPDLPRKPDPTAALALARELGVAPTECAFVGDTSIDMDTARAAGMYGVGVAWGFREVAELKAHGARAVADTAQSLLTALRDARP
>NZ_CP012109.1|WP_002637977.1|9433099_9433684_+|biopolymer-transporter-ExbD
MAIQVPGKRYGKRLQHSKVFGHGATAKKSGYSDLLITPLVDMFIIIVLFLIANFSATGEVLNMTKDIELPEAVNVQEVEMHPVVMVSGAQILVSGTVIGRVEDFTKDEYLNIPALEEKLRDMKKQYEDLHSMAQDSANSFKGDINIQAHKDVEYSIIKRVMFSCATAGYNNINFAVMTAGGGDAVKEASAKATP
>NZ_CP012109.1|WP_002637976.1|9432587_9433076_+|biopolymer-transporter-ExbD
MAGGMDTGGGKGGKKSLDTSINLTAFIDLMAVTISFLIMTAVWTQIGRLQVSQAGGPSMEEEQQQEEQTKTVQLSLLITPTELRLTADQSAFEPIPLTKDAKGKTDLSKLTARFKELKAQLPDQSAITLQPEDKVRYEDLVRIIDECIGSGLPQVSVSAAMG
>NZ_CP012109.1|WP_002637975.1|9431727_9432468_+|MotA/TolQ/ExbB-proton-channel-family-protein
MNLASVTNLTVLANVGGPQRGFFEEVAMRWEAGQWGMYPIAACLIVALAIMVERSIILFGKASINKEAFLRGLKKHIYAGDLDKAINYVAGQKSTPLTNVIKAGLMNVPKGNDEVQAALDEASLRETPKIEARTGYLAMLGNAAMLAGLLGTVSGLIACFEAVANVNPADKATILANGISEAMNCTGFGLLTAIPALISFSVLTGRTQSLINDINETSVSVLNLIVANKDKFKNLNVPASAARDDE
>NZ_CP012109.1|WP_002637974.1|9430500_9431403_-|general-secretion-pathway-protein-GspE
MARKRIGELLLEQRAISVAQLEAGLAAHRKSGQRLGATLIAQGAITEATLAGALSQALGLPLVDLTNTPPEWAAVHMLRARFCEQHDLFPIALESAGGRKQLVVAMSDPLNVTAVEEIEFTTGLKVSPRVAPLSIVRGAILRYYHKVPVAAPSTARATPPGRPAAKPVKASPPLTARPAPAPTQDDDDEEVIIGEELPPAEMTQRTSLAELIREREEQSKQKRGQAGVTAKPKAPAPSAGGTGVLDDLDYLFGQAREDPDRVEELERKFWALMRIMARKGLLSNEEFTRELDDEDKASES
>NZ_CP012109.1|WP_002637985.1|9440878_9441889_-|alpha/beta-hydrolase-family-protein
MSRTHLVDFLFAGLSRRSRLFSQGWGNEQFLEDVAEAAPFQHLPSPVTPAWSEPRLQRGLQVRDGTFLSPLAGLDAAAQTAHVRWLSAGNGSPRGACIVLASSREEGFSLRERLYAPLAREGIDLFLLENPYYGLRRPLGQKGGALRTVSDHVLMNLGMVEEARALLAWLRASGRSRLGVAGYSMGGYMAALTAAVVSEPVAVAALAAGASPVPVFTQGLLSWSIAFALLDGPRGDAAQARLRLGRIFDLANLTRFPPPKQPDAAVLVACRRDGFVPGEETLALHAHWPGSELRWVDAGHVSALFTERAALCAAIRDALARLEVSASAPARQSPSA
>NZ_CP012109.1|WP_002637986.1|9441949_9442585_+|hypothetical-protein
MGSFRGMLQALPLVGTWFQEGDIQPEEVRAFWRHMQRCFQTDAVQLAGSLGDGPFGPSGLCHAGGARPCPRHVAAVGPCLHLPFEVGVPRAGWDLWRQVVACVHAHQHILQDEAAGPAAWARNEVEALRSNVELHFWRRGTTPSPWRLASRLRTLGCRSEDITRAGHELALASASVRQGAVENEASHVALQWLEAHVPHLRWNKAYHPNAR
>NZ_CP012109.1|WP_002637987.1|9442631_9443288_+|LON-peptidase-substrate-binding-domain-containing-protein
MTAQERIERAASALKVFPLPSAVLFPHTVIPLHIFEPRYRALVRDALAGDRILALSQLEPGWEGDYGGRPPMQPLMCAGVIVWDEQVEEGRYNILLQGVCRVRMTSELTEDKAYREVQAEALPDFPYEGPEEEQLRQAVFELAGRVPPSFAENLLPVAARAQGGMLADVVASAVIPEPERRQALLAELDVKRRLEGVLEDVGALIGRLQPLRPTGPLN
>NZ_CP012109.1|WP_002637988.1|9443370_9445263_+|NAD(+)-synthase
MRLVKLGLASVNTTVGAFTRNTDKALAQAGKMAADGVTVGVFQEQVIAGYPAEDMVQWQGFMDRQWPELERFARETASLSTVFVVGVGIAHQGLRLNCAAVVAGGRILGLVPKEKLPTYSVFYEARTFGRGQAGMAEVHRGVPLGDYLFRFDFGVVSPEVCEDIWSADGPMRRRTYSGAELVVNLSASPFRLGFVETRRELIATRAADHQCTIAYCNAVGSNDGLIFDGGGFLNQNGRHVMETPRFQEGYAAAVVDLDRTLRLRAEATTWRVDRESWLAAGGQEVPVLDCTEAVRTRRDALTYPVPAHRSFFLPSPDTRRGAREALCEDILDALSLGVGDYFEKTRAFKVLGIALSGGRDSLLTLLIAHRYAKRARPENPGSLIQAFYMPSRFSSDATRDAAETMARELGVAFQVVSIDEAFERERAVAQTMLGGKEVTPITEQNIQARLRAQRMWNWSNSCGGLFLQTGNMSEKSVGYTTIGGDLMGALAVIANVPKTVVMYLLDYLQNTTGYEGIRKVLAKPAGPELAHDQVGEDELMPFPILDACFYLYGSEKLTPAEILQALTAMFPEVESARLGGYVEKFVRLFQQSIYKWVQSPLSLHIGNLDLDRERALQLPVVTSAEWMRPG
>NZ_CP012109.1|WP_044889881.1|9445353_9446661_+|hypothetical-protein
MPVSRLAGRRVGNNLHVCHSTMEAWMKAKILAGAVAALMYGGVAVANDGDCPPPQASASQNQQGTMVAQAQQNDMSGDGTLQEDDVIILETQPVPDGSGNSSQDGMGGSGDQGLDDSGMGGSGDQGLDDSGMGGSGQQGSKAQGDIYMNVPVRCEPVGQQGTGGSGQESMTPPPAATPPPPATPPPAAPQGTHDSEQLVVPPAPPLGTGGSGQPSAPVYPEPESTYAPDAVGGSGLATTPPPSDFQPSAERAGRTEVKKEEHNKIKGLSVMLGGGVEGYTGALAPQISPGATAGVRAAIRPSKVLGLELGYTGALNNIRNEETGTSGPDLVRNGGQAVLTLGITPTAWQPYLLGGIGINNYNFRGGEALGYRDDTVGNVPAGVGLRGHVGHFVVDARANYNFLFDKDFAPGIERGGGDFEGGGSYQGTVSIGGTF
>NZ_CP012109.1|WP_002637990.1|9446803_9447127_+|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MALNVEDVKVGTGAEATSGKSVTVHYVGTLTSGSKFDSSRDRGQGFTFRLGAGQVIEGWDKGVAGMKVGGVRKLTIPPEMGYGARGFPPVIPPNSTLLFEVELLDVR
>NZ_CP012109.1|WP_002637991.1|9447141_9447519_+|thioredoxin
MAAVEITKDNFKETVSKEGIVILDWWASWCGPCRAFAPIFEQTSTKHPDVVFGKIDTDAQQELSGAFEIRSIPTLMVFRDGILLFEQPGALPAAALEDLLSQVKALDMEQVKKEVAARRTETPQA
>NZ_CP012109.1|WP_002637992.1|9447709_9448945_+|hybrid-sensor-histidine-kinase/response-regulator
MLHSSSRETSNGDLPRARILLVDDTPANLLSLEAILEPLGQELVLARSGEEALRELLRGEFACILMDVQMPGLDGLETANLIRARERTRHLPILFITALSREAAFVTRGYEHGAVDYLLKPVDPDILRTKVQVFVDLSRRGEMVKRQAVELAERRQAEEASQRASELEQQLMGIVGHDIRTPLSVVLATAKSQLAHAELAPEQQKAFERVARGGERIQQIVDLLTDFTRSRLGGGIPVVPRAGDLNELCREVADELHVARPGRVIQCDFSRDSLHGVWDLERMAQVLANLLDNALKYSPESSAVRLSTWEKPDAVFVEVHNAGAPIPQELLPHLFDAFRRGEATREQAKASLGLGLYIARAVVEAHRGRLSVRSSESEGTTFRICLPRCADARSRGSRPEEASAAPSPMPA
>NZ_CP012109.1|WP_044889880.1|9448952_9449840_-|hypothetical-protein
MNTRQRQTLKWWCVALAAWSLAGTACDNVAAGDVQVTMSGGDGTQRGLPDTLFQDGWSVQFTRYLVSLGDVTLTSASGEVRSSDRHVLVDIQKGDIPLVDLNGVPAGRWDVGFRVSPPEARTELADGQVSAEDLAMMRERGFSYFVEGHATKQNEPVLRFRMGFPVNALMNNCINGADGTQGIVVPEGSVARPEVTIHAEHMFYDRLGTHRGVQLRFEAIAATAGADNVITPEGLSTQQLTDLRDRDGNELRDAQGQPVIYQPGAFDVRTLQAFIAQSVVDQAHLNGGGVCTVVK
>NZ_CP012109.1|WP_044889879.1|9449957_9452705_+|TonB-family-protein
MRSSPVWIPTLVLCVLSATGELPVTPPVPLEAPGPVLPADVPPPEVPATVLLRITIDRTGEVSQVEVRQSAGTAFDRAAMSAALRWRFQPARRGDEAIDVRVDVPVTFVPPVHGHHLETVAQGEPGHSHGGTAGAAGETNARAGQDPGDGRQEHRHGTASSSGGDLESEERPPVPGAARPVEGSLPSATGHAAAVGAPSPDSQEQVGEGTPPASDAPVAPQPPSFSTTVRGASHAPPPVAVGDFHIPVGQLADVPRRSASDLMLLAPGVMLANHGGEGHAESIYIRGFDAGEGKDVELRLNGVPLNEVSHSHGHGYADTYFIIPELVESLRVTEGPYDPSQGDFGVAGTVEYQLGLARRGLTASLSTGSFAARRLSLLWGPPESSESTFVGVLLRQGHGFGPNRAYSNATVMAQTELRVTDASRLRLFGTSYGSRFSSPGVVRETDVVDSRMPCAPDADSQFFCSYDPNQGGAGQRHILSAELQSRLKNGGRFVQQGYVVLRQTRIRDNFTGFLLDTPPDGERQRGDNTEGYYRGSTVGLRGRYTPGLTLLGQPQPLELGYVARYDDVRTRSRRLRARGGVPYATVYDNQVRTTNLGAYASMRVAPLSWLTLRGGVRLDTFLFGVDDHNRPAVDRDGPRLTDESVEAYGFFASPRASAEVRLTPRLTWLTSAGLGARSSDAAALSDAELAPYARVTSGETGLSWRLDGPLALEARGAFFATRVSQDFVFDETVGRNQPIGASQRLGAFVSARGTWAERLDIQGSLAWAHATLPTPGASAWKLWDGAVMPYIPQLLGRVDASLRGAATVVGQRLDWNVALGHSAIGPRPLPLDRYSAPIFLFDVGARARWKAVEVGLSVENLLDTRWRESEFNFVSNFRGPDAPPSLMATRHFTAGAPRTFMGTLTLHLDLLEDSP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP012109_32	32.1\|9440551\|33\|NZ_CP012109\|CRISPRCasFinder	9440551-9440583	33	NZ_CP012109.1	9440726-9440758	2	0.939

1. spacer 32.1|9440551|33|NZ_CP012109|CRISPRCasFinder matches to position: 9440726-9440758, mismatch: 2, identity: 0.939

cgggattaccgatgcgtccgagcccggcgcgca	CRISPR spacer
cgggattaccgatgcgtccgagcccaacgcgca	Protospacer
*************************..******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	KU958700	Streptomyces phage Chymera, complete genome	3216-3240	3	0.88
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	1326550-1326574	3	0.88
NZ_CP012109_5	5.2\|1288997\|28\|NZ_CP012109\|PILER-CR	1288997-1289024	28	NC_020894	Streptomyces hygroscopicus subsp. jinggangensis TL01 plasmid pSHJGH1, complete sequence	97090-97117	4	0.857
NZ_CP012109_5	5.2\|1288997\|28\|NZ_CP012109\|PILER-CR	1288997-1289024	28	NC_004719	Streptomyces avermitilis MA-4680 = NBRC 14893 plasmid SAP1, complete sequence	59570-59597	4	0.857
NZ_CP012109_5	5.2\|1288997\|28\|NZ_CP012109\|PILER-CR	1288997-1289024	28	NC_017766	Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG1, complete sequence	97091-97118	4	0.857
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	NC_022049	Paracoccus aminophilus JCM 7686 plasmid pAMI4, complete sequence	427969-427993	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	KX683293	Mycobacterium phage Daffy, complete genome	58618-58642	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	KX670813	Mycobacterium phage MitKao, complete genome	58618-58642	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	NC_027985	Mycobacterium phage UncleHowie, complete genome	58145-58169	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	KX592589	Mycobacterium phage Iridoclysis, complete genome	58747-58771	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	MT316460	Mycobacterium phage Kimbrough, complete genome	59042-59066	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	JF704103	Mycobacterium phage Vortex, complete sequence	58730-58754	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	KY676783	Mycobacterium phage Chorkpop, complete genome	58633-58657	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	KU867907	Mycobacterium phage Potter, complete genome	58456-58480	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	MK279885	Mycobacterium phage Surely, complete genome	59015-59039	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	MG925346	Mycobacterium phage LeeLot, complete genome	59049-59073	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	MF155947	Mycobacterium phage LemonSlice, complete genome	58440-58464	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	MK112553	Mycobacterium Phage Squiggle, complete genome	58453-58477	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	NC_048047	Caulobacter phage CcrBL9, complete genome	21982-22006	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	NC_048047	Caulobacter phage CcrBL9, complete genome	321994-322018	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	MH779516	Mycobacterium phage Waterdiva, complete genome	58997-59021	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	NZ_CP020399	Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence	428618-428642	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	NC_019959	Mycobacterium sp. JS623 plasmid pMYCSM03, complete sequence	105753-105777	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	874980-875004	4	0.84
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	NC_025427	Rhizobium phage vB_RleM_PPF1, complete genome	40909-40933	4	0.84
NZ_CP012109_5	5.1\|1288919\|28\|NZ_CP012109\|PILER-CR	1288919-1288946	28	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1300499-1300526	5	0.821
NZ_CP012109_7	7.1\|1830970\|31\|NZ_CP012109\|CRISPRCasFinder	1830970-1831000	31	NZ_CP020952	Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence	408465-408495	5	0.839
NZ_CP012109_11	11.2\|5365519\|27\|NZ_CP012109\|CRT	5365519-5365545	27	NZ_LT991959	Enterobacter cloacae complex sp. isolate C45 plasmid pC45-p2	138802-138828	5	0.815
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	NC_021295	Burkholderia insecticola plasmid p2, complete sequence	119332-119356	5	0.8
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	NC_021295	Burkholderia insecticola plasmid p2, complete sequence	240940-240964	5	0.8
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	NZ_CP013855	Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence	188733-188757	5	0.8
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2463590-2463614	5	0.8
NZ_CP012109_5	5.2\|1288997\|28\|NZ_CP012109\|PILER-CR	1288997-1289024	28	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1598617-1598644	6	0.786
NZ_CP012109_5	5.2\|1288997\|28\|NZ_CP012109\|PILER-CR	1288997-1289024	28	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1221458-1221485	6	0.786
NZ_CP012109_5	5.2\|1288997\|28\|NZ_CP012109\|PILER-CR	1288997-1289024	28	NC_012853	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132503, complete sequence	509281-509308	6	0.786
NZ_CP012109_5	5.2\|1288997\|28\|NZ_CP012109\|PILER-CR	1288997-1289024	28	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	486191-486218	6	0.786
NZ_CP012109_5	5.2\|1288997\|28\|NZ_CP012109\|PILER-CR	1288997-1289024	28	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1452623-1452650	6	0.786
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	KF986246	Mycobacterium phage MichelleMyBell, complete genome	17011-17035	6	0.76
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	MH399787	Mycobacterium phage Rubeelu, complete genome	16980-17004	6	0.76
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	NC_021061	Mycobacterium phage Butters, complete genome	16980-17004	6	0.76
NZ_CP012109_14	14.1\|5722556\|25\|NZ_CP012109\|CRISPRCasFinder	5722556-5722580	25	MK524500	Mycobacterium phage Kevin1, complete genome	16981-17005	6	0.76
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	MH651167	Gordonia phage Angelique, complete genome	4445-4476	6	0.812
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	MK433274	Gordonia phage Bradissa, complete genome	4454-4485	6	0.812
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	MG872834	Gordonia phage Confidence, complete genome	4448-4479	6	0.812
NZ_CP012109_29	29.20\|8958877\|31\|NZ_CP012109\|CRISPRCasFinder	8958877-8958907	31	MT952845	Microbacterium phage GardenState, complete genome	20629-20659	6	0.806
NZ_CP012109_29	29.20\|8958877\|31\|NZ_CP012109\|CRISPRCasFinder	8958877-8958907	31	MK880124	Microbacterium phage IAmGroot, complete genome	21290-21320	6	0.806
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NZ_CP015203	Rhodococcus sp. 008 plasmid pR8L1, complete sequence	151229-151260	6	0.812
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NC_007491	Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence	144296-144327	6	0.812
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NZ_CP035507	Haematobacter massiliensis strain OT1 plasmid pOT1-7, complete sequence	50980-51011	6	0.812
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NC_007764	Rhizobium etli CFN 42 plasmid p42c, complete sequence	72203-72235	6	0.818
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP020908	Rhizobium etli strain NXC12 plasmid pRetNXC12b, complete sequence	82685-82717	6	0.818
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP013597	Rhizobium sp. N741 plasmid pRspN741b, complete sequence	94813-94845	6	0.818
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP013501	Rhizobium esperanzae strain N561 plasmid pRspN561a, complete sequence	95173-95205	6	0.818
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP013507	Rhizobium sp. N1341 plasmid pRspN1341b, complete sequence	94813-94845	6	0.818
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP013518	Rhizobium sp. N113 plasmid pRspN113a, complete sequence	95173-95205	6	0.818
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP013491	Rhizobium sp. N6212 plasmid pRspN6212a, complete sequence	95173-95205	6	0.818
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP013496	Rhizobium sp. N621 plasmid pRspN621a, complete sequence	95173-95205	6	0.818
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP013591	Rhizobium sp. N871 plasmid pRspN871a, complete sequence	95173-95205	6	0.818
NZ_CP012109_31	31.39\|9242833\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242833-9242865	33	NZ_CP015237	Rhodococcus fascians D188 plasmid unnamed2, complete sequence	101137-101169	6	0.818
NZ_CP012109_31	31.70\|9245035\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9245035-9245066	32	NZ_LR134469	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 27, complete sequence	126706-126737	6	0.812
NZ_CP012109_5	5.1\|1288919\|28\|NZ_CP012109\|PILER-CR	1288919-1288946	28	NZ_CP045373	Sulfitobacter sp. THAF37 plasmid pTHAF37_a, complete sequence	185192-185219	7	0.75
NZ_CP012109_5	5.1\|1288919\|28\|NZ_CP012109\|PILER-CR	1288919-1288946	28	KJ194582	Mycobacterium phage Hawkeye, complete genome	65371-65398	7	0.75
NZ_CP012109_5	5.2\|1288997\|28\|NZ_CP012109\|PILER-CR	1288997-1289024	28	NZ_CP038237	Leisingera sp. NJS201 plasmid unnamed3, complete sequence	71786-71813	7	0.75
NZ_CP012109_7	7.1\|1830970\|31\|NZ_CP012109\|CRISPRCasFinder	1830970-1831000	31	NZ_CP049358	Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence	296935-296965	7	0.774
NZ_CP012109_28	28.1\|8920092\|36\|NZ_CP012109\|PILER-CR,CRISPRCasFinder,CRT	8920092-8920127	36	KU728633	Mycobacterium phage Bipper, complete genome	67566-67601	7	0.806
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	227621-227652	7	0.781
NZ_CP012109_29	29.42\|8958521\|33\|NZ_CP012109\|PILER-CR,CRT	8958521-8958553	33	MH651167	Gordonia phage Angelique, complete genome	4444-4476	7	0.788
NZ_CP012109_29	29.42\|8958521\|33\|NZ_CP012109\|PILER-CR,CRT	8958521-8958553	33	MK433274	Gordonia phage Bradissa, complete genome	4453-4485	7	0.788
NZ_CP012109_29	29.42\|8958521\|33\|NZ_CP012109\|PILER-CR,CRT	8958521-8958553	33	MG872834	Gordonia phage Confidence, complete genome	4447-4479	7	0.788
NZ_CP012109_29	29.47\|8958877\|32\|NZ_CP012109\|CRT,PILER-CR	8958877-8958908	32	MT952845	Microbacterium phage GardenState, complete genome	20628-20659	7	0.781
NZ_CP012109_29	29.47\|8958877\|32\|NZ_CP012109\|CRT,PILER-CR	8958877-8958908	32	MK880124	Microbacterium phage IAmGroot, complete genome	21289-21320	7	0.781
NZ_CP012109_31	31.10\|9240765\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9240765-9240796	32	NZ_CP047380	Escherichia coli strain CAU16175 plasmid pCAU16175_2, complete sequence	66088-66119	7	0.781
NZ_CP012109_31	31.15\|9241124\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241124-9241158	35	NZ_CP050953	Rhodococcus sp. DMU1 plasmid unnamed	507502-507536	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	1500478-1500512	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	1461286-1461320	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	1052154-1052188	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	1446114-1446148	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	1479531-1479565	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	78543-78577	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	157673-157707	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	63335-63369	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	1389258-1389292	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	603428-603462	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	1654953-1654987	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	1490212-1490246	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	244968-245002	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	247794-247828	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	312506-312540	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	1497986-1498020	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	1611538-1611572	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	1147102-1147136	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	1199830-1199864	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	454734-454768	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	242234-242268	7	0.8
NZ_CP012109_31	31.18\|9241341\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241341-9241375	35	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	244969-245003	7	0.8
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NZ_LR594663	Variovorax sp. RA8 plasmid 2	272356-272387	7	0.781
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NC_017805	Deinococcus gobiensis I-0 plasmid P1, complete sequence	195033-195064	7	0.781
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	369989-370020	7	0.781
NZ_CP012109_31	31.36\|9242616\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9242616-9242650	35	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	983218-983252	7	0.8
NZ_CP012109_31	31.36\|9242616\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9242616-9242650	35	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	983191-983225	7	0.8
NZ_CP012109_31	31.36\|9242616\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9242616-9242650	35	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	983225-983259	7	0.8
NZ_CP012109_31	31.36\|9242616\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9242616-9242650	35	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	912788-912822	7	0.8
NZ_CP012109_31	31.36\|9242616\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9242616-9242650	35	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	872134-872168	7	0.8
NZ_CP012109_31	31.62\|9244467\|34\|NZ_CP012109\|CRISPRCasFinder,CRT	9244467-9244500	34	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1975773-1975806	7	0.794
NZ_CP012109_31	31.70\|9245035\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9245035-9245066	32	HM486077	Tsukamurella phage TPA2, complete sequence	48900-48931	7	0.781
NZ_CP012109_31	31.70\|9245035\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9245035-9245066	32	NC_015210	Tsukamurella phage TPA2, complete genome	48900-48931	7	0.781
NZ_CP012109_7	7.1\|1830970\|31\|NZ_CP012109\|CRISPRCasFinder	1830970-1831000	31	NC_011981	Agrobacterium vitis S4 plasmid pAtS4e, complete sequence	235561-235591	8	0.742
NZ_CP012109_22	22.3\|8609284\|33\|NZ_CP012109\|CRISPRCasFinder	8609284-8609316	33	NC_021229	Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919	148096-148128	8	0.758
NZ_CP012109_28	28.22\|8921611\|36\|NZ_CP012109\|PILER-CR	8921611-8921646	36	NZ_CP016463	Bosea sp. RAC05 plasmid pBSY19_1, complete sequence	689934-689969	8	0.778
NZ_CP012109_28	28.43\|8923134\|35\|NZ_CP012109\|PILER-CR	8923134-8923168	35	NC_011881	Pseudarthrobacter chlorophenolicus A6 plasmid pACHL02, complete sequence	76713-76747	8	0.771
NZ_CP012109_28	28.67\|8921610\|36\|NZ_CP012109\|CRISPRCasFinder,CRT	8921610-8921645	36	NZ_CP016463	Bosea sp. RAC05 plasmid pBSY19_1, complete sequence	689934-689969	8	0.778
NZ_CP012109_28	28.88\|8923133\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	8923133-8923167	35	NC_011881	Pseudarthrobacter chlorophenolicus A6 plasmid pACHL02, complete sequence	76713-76747	8	0.771
NZ_CP012109_29	29.1\|8957494\|35\|NZ_CP012109\|CRISPRCasFinder	8957494-8957528	35	NZ_CP045361	Roseivivax sp. THAF40 plasmid pTHAF40_a, complete sequence	208430-208464	8	0.771
NZ_CP012109_29	29.1\|8957494\|35\|NZ_CP012109\|CRISPRCasFinder	8957494-8957528	35	NZ_CP045319	Roseivivax sp. THAF197b plasmid pTHAF197b_a, complete sequence	100701-100735	8	0.771
NZ_CP012109_29	29.1\|8957494\|35\|NZ_CP012109\|CRISPRCasFinder	8957494-8957528	35	NC_022044	Paracoccus aminophilus JCM 7686 plasmid pAMI6, complete sequence	180978-181012	8	0.771
NZ_CP012109_29	29.1\|8957494\|35\|NZ_CP012109\|CRISPRCasFinder	8957494-8957528	35	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1373641-1373675	8	0.771
NZ_CP012109_29	29.10\|8958153\|34\|NZ_CP012109\|CRISPRCasFinder	8958153-8958186	34	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	307511-307544	8	0.765
NZ_CP012109_29	29.20\|8958877\|31\|NZ_CP012109\|CRISPRCasFinder	8958877-8958907	31	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	590648-590678	8	0.742
NZ_CP012109_29	29.20\|8958877\|31\|NZ_CP012109\|CRISPRCasFinder	8958877-8958907	31	NC_014159	Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete sequence	52417-52447	8	0.742
NZ_CP012109_29	29.47\|8958877\|32\|NZ_CP012109\|CRT,PILER-CR	8958877-8958908	32	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	590647-590678	8	0.75
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP045548	Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence	201249-201281	8	0.758
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NC_012987	Methylorubrum extorquens AM1 plasmid p1METDI, complete sequence	61636-61667	8	0.75
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NZ_CP049358	Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence	80928-80959	8	0.75
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	CP036360	Agrobacterium sp. 33MFTa1.1 plasmid p_JBx_073812, complete sequence	29018-29049	8	0.75
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NZ_CP032344	Azospirillum brasilense strain MTCC4038 plasmid p5, complete sequence	127857-127888	8	0.75
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NZ_CP033323	Azospirillum brasilense strain Cd plasmid p5, complete sequence	16794-16825	8	0.75
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NZ_CP033317	Azospirillum brasilense strain Sp 7 plasmid p5, complete sequence	51431-51462	8	0.75
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NZ_CP031159	Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence	69554-69585	8	0.75
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NZ_CP012919	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p5, complete sequence	55583-55614	8	0.75
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NZ_CP014797	Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence	99493-99524	8	0.75
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	MF417927	Uncultured Caudovirales phage clone 9F_2, partial genome	14860-14891	8	0.75
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP047178	Rathayibacter sp. VKM Ac-2759 plasmid unnamed2, complete sequence	1381-1413	8	0.758
NZ_CP012109_31	31.39\|9242833\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242833-9242865	33	NC_008712	Paenarthrobacter aurescens TC1 plasmid pTC1, complete sequence	128648-128680	8	0.758
NZ_CP012109_31	31.48\|9243470\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9243470-9243501	32	NC_008381	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence	313172-313203	8	0.75
NZ_CP012109_31	31.55\|9243971\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9243971-9244002	32	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	462754-462785	8	0.75
NZ_CP012109_32	32.1\|9440551\|33\|NZ_CP012109\|CRISPRCasFinder	9440551-9440583	33	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	841276-841308	8	0.758
NZ_CP012109_28	28.16\|8921180\|35\|NZ_CP012109\|PILER-CR,CRISPRCasFinder,CRT	8921180-8921214	35	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	105858-105892	9	0.743
NZ_CP012109_28	28.16\|8921180\|35\|NZ_CP012109\|PILER-CR,CRISPRCasFinder,CRT	8921180-8921214	35	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	134181-134215	9	0.743
NZ_CP012109_28	28.18\|8921326\|35\|NZ_CP012109\|PILER-CR	8921326-8921360	35	MK416010	Klebsiella phage ST11-OXA245phi3.2, complete genome	50532-50566	9	0.743
NZ_CP012109_28	28.18\|8921326\|35\|NZ_CP012109\|PILER-CR	8921326-8921360	35	MK422448	Klebsiella phage ST512-KPC3phi13.3, complete genome	10236-10270	9	0.743
NZ_CP012109_28	28.63\|8921325\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	8921325-8921359	35	MK416010	Klebsiella phage ST11-OXA245phi3.2, complete genome	50532-50566	9	0.743
NZ_CP012109_28	28.63\|8921325\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	8921325-8921359	35	MK422448	Klebsiella phage ST512-KPC3phi13.3, complete genome	10236-10270	9	0.743
NZ_CP012109_29	29.1\|8957494\|35\|NZ_CP012109\|CRISPRCasFinder	8957494-8957528	35	CP040467	Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence	280841-280875	9	0.743
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	569810-569841	9	0.719
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	1951713-1951744	9	0.719
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	599220-599251	9	0.719
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	NZ_CP045329	Labrenzia sp. THAF191b plasmid pTHAF191b_a, complete sequence	396007-396038	9	0.719
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	NZ_CP045345	Labrenzia sp. THAF187b plasmid pTHAF187b_a, complete sequence	9583-9614	9	0.719
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	NZ_CP045335	Labrenzia sp. THAF191a plasmid pTHAF191a_b, complete sequence	148187-148218	9	0.719
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	569839-569870	9	0.719
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	599246-599277	9	0.719
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	456703-456734	9	0.719
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	232148-232179	9	0.719
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	599229-599260	9	0.719
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	569627-569658	9	0.719
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	569611-569642	9	0.719
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	621560-621591	9	0.719
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	452492-452523	9	0.719
NZ_CP012109_29	29.15\|8958521\|32\|NZ_CP012109\|CRISPRCasFinder	8958521-8958552	32	NZ_LR026982	Rhodoplanes piscinae isolate Rhod_plasmid plasmid 1, complete sequence	18927-18958	9	0.719
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1417074-1417107	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1399868-1399901	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1484844-1484877	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1473222-1473255	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1339519-1339552	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	2004059-2004092	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1474103-1474136	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	1478401-1478434	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1653292-1653325	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1218515-1218548	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1484851-1484884	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1779220-1779253	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1398214-1398247	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	477890-477923	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1916436-1916469	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	1481552-1481585	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1401726-1401759	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	1191209-1191242	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1406091-1406124	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	1443207-1443240	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1338541-1338574	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1383912-1383945	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1383903-1383936	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1402819-1402852	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1581624-1581657	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1339511-1339544	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1338864-1338897	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1339502-1339535	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1368307-1368340	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	1493033-1493066	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1581591-1581624	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1458579-1458612	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1491422-1491455	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1580385-1580418	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1392178-1392211	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1458579-1458612	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1491422-1491455	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1395087-1395120	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1580421-1580454	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1458579-1458612	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1340359-1340392	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1417220-1417253	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1392200-1392233	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1457782-1457815	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1491422-1491455	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1491422-1491455	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1491422-1491455	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1580421-1580454	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1580410-1580443	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1392200-1392233	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	1399151-1399184	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1417201-1417234	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	1379804-1379837	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	1433060-1433093	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	1471938-1471971	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1488737-1488770	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1580410-1580443	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1392200-1392233	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1458578-1458611	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1581411-1581444	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1392200-1392233	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1392200-1392233	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1580421-1580454	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1491425-1491458	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1580432-1580465	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1580233-1580266	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1417186-1417219	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1232697-1232730	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1252712-1252745	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	667786-667819	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	419317-419350	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1430061-1430094	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1263307-1263340	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	988028-988061	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1635820-1635853	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	586795-586828	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	559729-559762	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1502662-1502695	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	551926-551959	9	0.735
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	551926-551959	9	0.735
NZ_CP012109_29	29.28\|8957494\|36\|NZ_CP012109\|PILER-CR,CRT	8957494-8957529	36	NZ_CP045361	Roseivivax sp. THAF40 plasmid pTHAF40_a, complete sequence	208429-208464	9	0.75
NZ_CP012109_29	29.28\|8957494\|36\|NZ_CP012109\|PILER-CR,CRT	8957494-8957529	36	NZ_CP045319	Roseivivax sp. THAF197b plasmid pTHAF197b_a, complete sequence	100700-100735	9	0.75
NZ_CP012109_29	29.28\|8957494\|36\|NZ_CP012109\|PILER-CR,CRT	8957494-8957529	36	NC_022044	Paracoccus aminophilus JCM 7686 plasmid pAMI6, complete sequence	180977-181012	9	0.75
NZ_CP012109_29	29.47\|8958877\|32\|NZ_CP012109\|CRT,PILER-CR	8958877-8958908	32	NC_014159	Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete sequence	52416-52447	9	0.719
NZ_CP012109_31	31.1\|9240127\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240127-9240159	33	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	294637-294669	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_KY401053	Salmonella enterica subsp. enterica serovar Enteritidis strain SE380 plasmid unnamed, complete sequence	94007-94039	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_KX807610	Salmonella enterica subsp. enterica serovar Enteritidis strain CNM4839/03 plasmid pUO-SeVR1, complete sequence	68656-68688	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_KT317612	Salmonella enterica subsp. enterica serovar Enteritidis strain EC20120002 plasmid pSE12-2, complete sequence	19868-19900	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP018663	Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-2, complete sequence	32936-32968	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP033089	Salmonella enterica subsp. enterica serovar Enteritidis strain SEO plasmid unnamed, complete sequence	20580-20612	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP026054	Salmonella enterica strain FDAARGOS_70 plasmid unnamed2, complete sequence	20530-20562	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP023437	Salmonella enterica strain FORC_074 plasmid pFORC74_2, complete sequence	29669-29701	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP040645	Salmonella enterica subsp. enterica serovar Enteritidis strain SAP18-0432 plasmid pCFSAN074386, complete sequence	28515-28547	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP018639	Salmonella enterica subsp. enterica serovar Enteritidis strain 69-3861 plasmid pSE69-3861-2, complete sequence	14502-14534	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP025553	Salmonella enterica subsp. enterica serovar Enteritidis strain ATCC BAA-708 plasmid pPIR00558, complete sequence	38872-38904	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	LR794377	Salmonella Enteritidis	15187-15219	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP018653	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-2, complete sequence	55585-55617	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP028152	Salmonella enterica subsp. enterica serovar Enteritidis str. RM2968 plasmid pRM2968-1, complete sequence	52887-52919	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP033342	Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN076214 plasmid pCFSAN076214_2, complete sequence	9193-9225	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	HG970000	Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 PT4 plasmid pSEN complete sequence	55623-55655	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP026570	Salmonella enterica strain MFDS1004839 plasmid pSE1004839, complete sequence	92015-92047	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP017233	Salmonella enterica strain FORC_051 plasmid pFORC51, complete sequence	80600-80632	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	439793-439825	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP009767	Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_007 plasmid pFORC7, complete sequence	39009-39041	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	KT317611	Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090641 plasmid pSE9-641, complete sequence	19877-19909	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	KT317613	Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120005 plasmid pSE12-5, complete sequence	19876-19908	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP012397	Salmonella enterica strain FORC_019 plasmid pFORC19, complete sequence	95086-95118	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP015525	Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF10978 plasmid pSJTUF10978, complete sequence	51880-51912	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP022004	Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN051873 plasmid pCFSAN051873, complete sequence	27582-27614	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP030198	Salmonella enterica strain SA20051401 plasmid pSA20051401.2, complete sequence	107298-107330	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP007508	Salmonella enterica subsp. enterica serovar Enteritidis strain Durban plasmid, complete sequence	35419-35451	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP008927	Salmonella enterica subsp. enterica serovar Enteritidis strain SEJ plasmid unnamed, complete sequence	19876-19908	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP041178	Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367B, complete sequence	31088-31120	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP050708	Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-2, complete sequence	20718-20750	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP015527	Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF10984 plasmid pSJTUF10984, complete sequence	51879-51911	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP011395	Salmonella enterica subsp. enterica serovar Enteritidis str. 18569 plasmid pCFSAN000006, complete sequence	11994-12026	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP007529	Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_0968 isolate CDC_2010K-0968 plasmid p00, complete sequence	18848-18880	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP041972	Salmonella enterica subsp. enterica serovar Enteritidis strain NCCP 16206 plasmid unnamed, complete sequence	27813-27845	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	MN125607	Salmonella enterica subsp. enterica serovar Enteritidis strain 1.1-2C7 plasmid p1.1-2C7, complete sequence	48807-48839	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	MN125608	Salmonella enterica subsp. enterica serovar Enteritidis strain 1.05-1C8 plasmid p1.05-1C8, complete sequence	78336-78368	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	MN125609	Salmonella enterica subsp. enterica serovar Enteritidis strain 1.15-2E5 plasmid p1.15-2E5, complete sequence	83188-83220	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP011943	Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 plasmid virulence, complete sequence	55623-55655	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP020824	Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN033541 plasmid pCFSAN033541, complete sequence	45515-45547	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP020826	Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN033543 plasmid pCFSAN033543, complete sequence	39422-39454	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP013098	Salmonella enterica subsp. enterica serovar Enteritidis strain CMCC50041 plasmid pCMCC50041, complete sequence	37129-37161	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP032850	Salmonella enterica subsp. enterica serovar Enteritidis strain NCM 61 plasmid pM0061, complete sequence	17-49	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP050711	Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-2, complete sequence	20718-20750	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	LN879484	Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSEN-BT, strain D7795	40924-40956	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP018660	Salmonella enterica subsp. enterica serovar Enteritidis strain 93-0639 plasmid pSE93-0639, complete sequence	6141-6173	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP018641	Salmonella enterica subsp. enterica serovar Enteritidis strain 70-1605 plasmid pSE70-1605, complete sequence	55631-55663	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP050725	Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-2, complete sequence	20718-20750	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NC_019120	Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSENV, complete sequence	35415-35447	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP018636	Salmonella enterica subsp. enterica serovar Enteritidis strain 56-3991 plasmid pSE56-3991, complete sequence	19876-19908	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP026714	Salmonella enterica strain FORC_078 plasmid pFORC_078_2, complete sequence	14753-14785	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP018650	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1607 plasmid pSE81-1607-2, complete sequence	19876-19908	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP030796	Salmonella enterica strain 2017K-0021 plasmid p2017K-0021, complete sequence	14211-14243	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP018656	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence	91703-91735	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP050722	Salmonella enterica subsp. enterica serovar Enteritidis strain SE81 plasmid pSE81-1, complete sequence	20718-20750	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP050718	Salmonella enterica subsp. enterica serovar Enteritidis strain SE95 plasmid pSE95-2, complete sequence	20718-20750	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP040647	Salmonella enterica subsp. enterica serovar Enteritidis strain SAP18-H9654 plasmid pCFSAN074385, complete sequence	49721-49753	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP043434	Salmonella enterica subsp. enterica serovar Enteritidis strain PT1 plasmid pPT1-1, complete sequence	20718-20750	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP025557	Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p1PIR00532, complete sequence	22894-22926	9	0.727
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_CP017178	Salmonella enterica strain FORC_056 plasmid unnamed1, complete sequence	37233-37265	9	0.727
NZ_CP012109_31	31.11\|9240834\|37\|NZ_CP012109\|CRISPRCasFinder,CRT	9240834-9240870	37	NC_004965	Sinorhizobium meliloti plasmid pRm1132f, complete sequence	5991-6027	9	0.757
NZ_CP012109_31	31.17\|9241269\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241269-9241303	35	NZ_CP019873	Pseudomonas syringae pv. tomato strain B13-200 plasmid pB13-200B, complete sequence	13919-13953	9	0.743
NZ_CP012109_31	31.17\|9241269\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241269-9241303	35	NZ_KY362371	Pseudomonas syringae pv. syringae strain UMAF1029 plasmid pPs1029, complete sequence	31460-31494	9	0.743
NZ_CP012109_31	31.17\|9241269\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241269-9241303	35	NZ_KY362370	Pseudomonas syringae pv. syringae strain UMAF0158 plasmid pPs0158, complete sequence	31453-31487	9	0.743
NZ_CP012109_31	31.17\|9241269\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241269-9241303	35	NZ_CP005971	Pseudomonas syringae UMAF0158 plasmid unnamed, complete sequence	58649-58683	9	0.743
NZ_CP012109_31	31.17\|9241269\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241269-9241303	35	NC_005205	Pseudomonas syringae pv. syringae A2 plasmid pPSR1, complete sequence	33607-33641	9	0.743
NZ_CP012109_31	31.17\|9241269\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241269-9241303	35	LT985193	Pseudomonas syringae strain CFBP 2116 genome assembly, plasmid: PP2	5422-5456	9	0.743
NZ_CP012109_31	31.17\|9241269\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9241269-9241303	35	NC_007275	Pseudomonas savastanoi pv. phaseolicola 1448A plasmid small, complete sequence	13927-13961	9	0.743
NZ_CP012109_31	31.19\|9241413\|34\|NZ_CP012109\|CRISPRCasFinder,CRT	9241413-9241446	34	NZ_CP022192	Yangia pacifica strain YSBP01 plasmid unnamed2, complete sequence	195857-195890	9	0.735
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	CP040467	Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence	226358-226389	9	0.719
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NC_012849	Ralstonia pickettii 12D plasmid pRp12D02, complete sequence	113234-113265	9	0.719
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	139236-139267	9	0.719
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NZ_CP019938	Ketogulonicigenium robustum strain SPU_B003 plasmid unnamed1, complete sequence	65282-65313	9	0.719
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1261269-1261300	9	0.719
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	113380-113411	9	0.719
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NC_014214	Meiothermus silvanus DSM 9946 plasmid pMESIL02, complete sequence	38726-38757	9	0.719
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NZ_CP034156	Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence	24963-24994	9	0.719
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NC_048782	Rhodococcus phage Sleepyhead, complete genome	23807-23838	9	0.719
NZ_CP012109_31	31.26\|9241907\|34\|NZ_CP012109\|CRISPRCasFinder,CRT	9241907-9241940	34	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	980469-980502	9	0.735
NZ_CP012109_31	31.26\|9241907\|34\|NZ_CP012109\|CRISPRCasFinder,CRT	9241907-9241940	34	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1151904-1151937	9	0.735
NZ_CP012109_31	31.26\|9241907\|34\|NZ_CP012109\|CRISPRCasFinder,CRT	9241907-9241940	34	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1427823-1427856	9	0.735
NZ_CP012109_31	31.26\|9241907\|34\|NZ_CP012109\|CRISPRCasFinder,CRT	9241907-9241940	34	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	214821-214854	9	0.735
NZ_CP012109_31	31.27\|9241978\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9241978-9242010	33	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	89278-89310	9	0.727
NZ_CP012109_31	31.27\|9241978\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9241978-9242010	33	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	690573-690605	9	0.727
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1991599-1991631	9	0.727
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1872403-1872435	9	0.727
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	2059524-2059556	9	0.727
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	531867-531899	9	0.727
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1879798-1879830	9	0.727
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1875824-1875856	9	0.727
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1232689-1232721	9	0.727
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1876010-1876042	9	0.727
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1844997-1845029	9	0.727
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1845646-1845678	9	0.727
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1845022-1845054	9	0.727
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1845022-1845054	9	0.727
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1878583-1878615	9	0.727
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1845022-1845054	9	0.727
NZ_CP012109_31	31.31\|9242263\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242263-9242295	33	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1845022-1845054	9	0.727
NZ_CP012109_31	31.39\|9242833\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242833-9242865	33	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	166337-166369	9	0.727
NZ_CP012109_31	31.39\|9242833\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9242833-9242865	33	NZ_CP021994	Cryobacterium sp. LW097 plasmid unnamed1	86264-86296	9	0.727
NZ_CP012109_31	31.48\|9243470\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9243470-9243501	32	KX641262	Mycobacterium phage Nazo, complete genome	425-456	9	0.719
NZ_CP012109_31	31.48\|9243470\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9243470-9243501	32	NC_023692	Mycobacterium phage BigNuz, complete genome	425-456	9	0.719
NZ_CP012109_31	31.48\|9243470\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9243470-9243501	32	NZ_CP049733	Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence	163310-163341	9	0.719
NZ_CP012109_31	31.48\|9243470\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9243470-9243501	32	NC_011984	Agrobacterium vitis S4 plasmid pAtS4c, complete sequence	122505-122536	9	0.719
NZ_CP012109_31	31.48\|9243470\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9243470-9243501	32	NZ_CP053207	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence	193962-193993	9	0.719
NZ_CP012109_31	31.48\|9243470\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9243470-9243501	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	806144-806175	9	0.719
NZ_CP012109_31	31.64\|9244609\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9244609-9244641	33	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	413265-413297	9	0.727
NZ_CP012109_31	31.64\|9244609\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9244609-9244641	33	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	387105-387137	9	0.727
NZ_CP012109_31	31.64\|9244609\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9244609-9244641	33	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	371029-371061	9	0.727
NZ_CP012109_31	31.64\|9244609\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9244609-9244641	33	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	387239-387271	9	0.727
NZ_CP012109_10	10.4\|5112619\|30\|NZ_CP012109\|CRT	5112619-5112648	30	NC_009936	Pseudomonas phage LKA1, complete genome	36289-36318	10	0.667
NZ_CP012109_10	10.4\|5112619\|30\|NZ_CP012109\|CRT	5112619-5112648	30	AM265639	Pseudomonas phage LKA1 complete genome, specific host Pseudomonas aeruginosa	36289-36318	10	0.667
NZ_CP012109_29	29.28\|8957494\|36\|NZ_CP012109\|PILER-CR,CRT	8957494-8957529	36	CP040467	Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence	280840-280875	10	0.722
NZ_CP012109_30	30.4\|8959597\|33\|NZ_CP012109\|PILER-CR	8959597-8959629	33	NZ_CP025015	Rhizobium leguminosarum strain Norway plasmid pRLN3, complete sequence	131483-131515	10	0.697
NZ_CP012109_31	31.8\|9240623\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9240623-9240655	33	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	151335-151367	10	0.697
NZ_CP012109_31	31.11\|9240834\|37\|NZ_CP012109\|CRISPRCasFinder,CRT	9240834-9240870	37	NC_021056	Streptomyces sp. PAMC 26508 plasmid pSP01, complete sequence	69858-69894	10	0.73
NZ_CP012109_31	31.11\|9240834\|37\|NZ_CP012109\|CRISPRCasFinder,CRT	9240834-9240870	37	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	762085-762121	10	0.73
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	NZ_CP041156	Leisingera aquaemixtae strain R2C4 plasmid unnamed1, complete sequence	101075-101106	10	0.688
NZ_CP012109_31	31.23\|9241697\|32\|NZ_CP012109\|CRISPRCasFinder,CRT	9241697-9241728	32	CP000665	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA04, complete sequence	28029-28060	10	0.688
NZ_CP012109_31	31.27\|9241978\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9241978-9242010	33	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	197469-197501	10	0.697
NZ_CP012109_31	31.36\|9242616\|35\|NZ_CP012109\|CRISPRCasFinder,CRT	9242616-9242650	35	NZ_CP040821	Paraoceanicella profunda strain D4M1 plasmid pD4M1C, complete sequence	164082-164116	10	0.714
NZ_CP012109_31	31.64\|9244609\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9244609-9244641	33	MN693279	Marine virus AFVG_25M346, complete genome	57163-57195	10	0.697
NZ_CP012109_31	31.69\|9244965\|33\|NZ_CP012109\|CRISPRCasFinder,CRT	9244965-9244997	33	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	960083-960115	10	0.697
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1226383-1226416	11	0.676
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1214815-1214848	11	0.676
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	616527-616560	11	0.676
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	961927-961960	11	0.676
NZ_CP012109_29	29.17\|8958665\|34\|NZ_CP012109\|CRISPRCasFinder	8958665-8958698	34	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	961872-961905	11	0.676
NZ_CP012109_28	28.9\|8920679\|39\|NZ_CP012109\|PILER-CR,CRISPRCasFinder,CRT	8920679-8920717	39	NZ_CP044976	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-1, complete sequence	26055-26093	12	0.692
NZ_CP012109_29	29.1\|8957494\|35\|NZ_CP012109\|CRISPRCasFinder	8957494-8957528	35	MF477236	Nocardia phage NTR1, complete genome	36908-36942	12	0.657
NZ_CP012109_29	29.1\|8957494\|35\|NZ_CP012109\|CRISPRCasFinder	8957494-8957528	35	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	148389-148423	12	0.657

1. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to KU958700 (Streptomyces phage Chymera, complete genome) position: , mismatch: 3, identity: 0.88

taacggcgccgcgcccggcggtgcg	CRISPR spacer
gaacggcgccgcgcccggcggcgcc	Protospacer
 ********************.**

2. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 3, identity: 0.88

taacggcgccgcgcccggcggtgcg	CRISPR spacer
tatcggcgccgcgcccggcggcgtg	Protospacer
** ******************.*.*

3. spacer 5.2|1288997|28|NZ_CP012109|PILER-CR matches to NC_020894 (Streptomyces hygroscopicus subsp. jinggangensis TL01 plasmid pSHJGH1, complete sequence) position: , mismatch: 4, identity: 0.857

cccggcgcccaagcctgcccggagcagt	CRISPR spacer
accggcgcccacgcctgcccggtgcact	Protospacer
 ********** ********** *** *

4. spacer 5.2|1288997|28|NZ_CP012109|PILER-CR matches to NC_004719 (Streptomyces avermitilis MA-4680 = NBRC 14893 plasmid SAP1, complete sequence) position: , mismatch: 4, identity: 0.857

cccggcgcccaagcctgcccggagcagt	CRISPR spacer
accggcgcccacgcctgcccggcgcact	Protospacer
 ********** ********** *** *

5. spacer 5.2|1288997|28|NZ_CP012109|PILER-CR matches to NC_017766 (Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG1, complete sequence) position: , mismatch: 4, identity: 0.857

cccggcgcccaagcctgcccggagcagt	CRISPR spacer
accggcgcccacgcctgcccggtgcact	Protospacer
 ********** ********** *** *

6. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to NC_022049 (Paracoccus aminophilus JCM 7686 plasmid pAMI4, complete sequence) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ggacggcgccgcgccgggcggtgcc	Protospacer
 .************* ********

7. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to KX683293 (Mycobacterium phage Daffy, complete genome) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ggccagcgccgcgcccggcggtgcg	Protospacer
 . *.********************

8. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to KX670813 (Mycobacterium phage MitKao, complete genome) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ggccagcgccgcgcccggcggtgcg	Protospacer
 . *.********************

9. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to NC_027985 (Mycobacterium phage UncleHowie, complete genome) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ggtccgcgccgcgcccggcggtgcg	Protospacer
 . * ********************

10. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to KX592589 (Mycobacterium phage Iridoclysis, complete genome) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ggtccgcgccgcgcccggcggtgcg	Protospacer
 . * ********************

11. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to MT316460 (Mycobacterium phage Kimbrough, complete genome) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ggtccgcgccgcgcccggcggtgcg	Protospacer
 . * ********************

12. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to JF704103 (Mycobacterium phage Vortex, complete sequence) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ggtccgcgccgcgcccggcggtgcg	Protospacer
 . * ********************

13. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to KY676783 (Mycobacterium phage Chorkpop, complete genome) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ggtccgcgccgcgcccggcggtgcg	Protospacer
 . * ********************

14. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to KU867907 (Mycobacterium phage Potter, complete genome) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ggtccgcgccgcgcccggcggtgcg	Protospacer
 . * ********************

15. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to MK279885 (Mycobacterium phage Surely, complete genome) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ggtccgcgccgcgcccggcggtgcg	Protospacer
 . * ********************

16. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to MG925346 (Mycobacterium phage LeeLot, complete genome) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ggtccgcgccgcgcccggcggtgcg	Protospacer
 . * ********************

17. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to MF155947 (Mycobacterium phage LemonSlice, complete genome) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ggtccgcgccgcgcccggcggtgcg	Protospacer
 . * ********************

18. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to MK112553 (Mycobacterium Phage Squiggle, complete genome) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ggtccgcgccgcgcccggcggtgcg	Protospacer
 . * ********************

19. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to NC_048047 (Caulobacter phage CcrBL9, complete genome) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
gaacggcgccgcgcgcggcggtgaa	Protospacer
 ************* ******** .

20. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to NC_048047 (Caulobacter phage CcrBL9, complete genome) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
gaacggcgccgcgcgcggcggtgaa	Protospacer
 ************* ******** .

21. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to MH779516 (Mycobacterium phage Waterdiva, complete genome) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ggtccgcgccgcgcccggcggtgcg	Protospacer
 . * ********************

22. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to NZ_CP020399 (Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ggacggcgccgcgcccggcgacgcg	Protospacer
 .******************..***

23. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to NC_019959 (Mycobacterium sp. JS623 plasmid pMYCSM03, complete sequence) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ccacggcgccgcgccggccggtgcg	Protospacer
. ************* * *******

24. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
tatcggcgccgcgcccggcggcatg	Protospacer
** ******************...*

25. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to NC_025427 (Rhizobium phage vB_RleM_PPF1, complete genome) position: , mismatch: 4, identity: 0.84

taacggcgccgcgcccggcggtgcg	CRISPR spacer
gtacagcgccgcgcccggcgctgcg	Protospacer
  **.*************** ****

26. spacer 5.1|1288919|28|NZ_CP012109|PILER-CR matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 5, identity: 0.821

gccggggcccaagcccgcccggagcagc	CRISPR spacer
gccgaggctcaagcccgcccggagcccg	Protospacer
****.***.****************

27. spacer 7.1|1830970|31|NZ_CP012109|CRISPRCasFinder matches to NZ_CP020952 (Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence) position: , mismatch: 5, identity: 0.839

gtcgggcccacgcagcccgccaccgt-gtcgt	CRISPR spacer
atcgggccgacgcagcccgctaccatcgtcg-	Protospacer
.******* ***********.***.* ****

28. spacer 11.2|5365519|27|NZ_CP012109|CRT matches to NZ_LT991959 (Enterobacter cloacae complex sp. isolate C45 plasmid pC45-p2) position: , mismatch: 5, identity: 0.815

ctttcgggagcggtgcccgcagtcccc	CRISPR spacer
atttcgggtgcggtgccggcagtccgg	Protospacer
 ******* ******** *******

29. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to NC_021295 (Burkholderia insecticola plasmid p2, complete sequence) position: , mismatch: 5, identity: 0.8

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ggtgggcggcgcgcccggcggtgcg	Protospacer
 .  **** ****************

30. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to NC_021295 (Burkholderia insecticola plasmid p2, complete sequence) position: , mismatch: 5, identity: 0.8

taacggcgccgcgcccggcggtgcg	CRISPR spacer
aaacggcgccgcgcccggcgcactg	Protospacer
 *******************   .*

31. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to NZ_CP013855 (Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence) position: , mismatch: 5, identity: 0.8

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ccccggcgccgcgcccggcggtccc	Protospacer
.  ******************* *

32. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.8

taacggcgccgcgcccggcggtgcg	CRISPR spacer
ccacggcgccgcgcccggcggcgtc	Protospacer
. *******************.*.

33. spacer 5.2|1288997|28|NZ_CP012109|PILER-CR matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.786

cccggcgcccaagcctgcccggagcagt	CRISPR spacer
ttcatcgcccaggccagcccggagcagt	Protospacer
..*. ******.*** ************

34. spacer 5.2|1288997|28|NZ_CP012109|PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 6, identity: 0.786

cccggcgcccaagcctgcccggagcagt	CRISPR spacer
ttcatcgcccaggccagcccggagcagt	Protospacer
..*. ******.*** ************

35. spacer 5.2|1288997|28|NZ_CP012109|PILER-CR matches to NC_012853 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132503, complete sequence) position: , mismatch: 6, identity: 0.786

cccggcgcccaagcctgcccggagcagt	CRISPR spacer
gacgaagcccaagcatgcccggagcagg	Protospacer
  **. ******** ************

36. spacer 5.2|1288997|28|NZ_CP012109|PILER-CR matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 6, identity: 0.786

cccggcgcccaagcctgcccggagcagt	CRISPR spacer
ttcatcgcccaggccagcccggagcagt	Protospacer
..*. ******.*** ************

37. spacer 5.2|1288997|28|NZ_CP012109|PILER-CR matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 6, identity: 0.786

cccggcgcccaagcctgcccggagcagt	CRISPR spacer
ttcatcgcccaggccagcccggagcagt	Protospacer
..*. ******.*** ************

38. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to KF986246 (Mycobacterium phage MichelleMyBell, complete genome) position: , mismatch: 6, identity: 0.76

taacggcgccgcgcccggcggtgcg	CRISPR spacer
gcacggcgccgcgcccggcggcagc	Protospacer
  *******************..

39. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to MH399787 (Mycobacterium phage Rubeelu, complete genome) position: , mismatch: 6, identity: 0.76

taacggcgccgcgcccggcggtgcg	CRISPR spacer
gcacggcgccgcgcccggcggcagc	Protospacer
  *******************..

40. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to NC_021061 (Mycobacterium phage Butters, complete genome) position: , mismatch: 6, identity: 0.76

taacggcgccgcgcccggcggtgcg	CRISPR spacer
gcacggcgccgcgcccggcggcagc	Protospacer
  *******************..

41. spacer 14.1|5722556|25|NZ_CP012109|CRISPRCasFinder matches to MK524500 (Mycobacterium phage Kevin1, complete genome) position: , mismatch: 6, identity: 0.76

taacggcgccgcgcccggcggtgcg	CRISPR spacer
gcacggcgccgcgcccggcggcagc	Protospacer
  *******************..

42. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to MH651167 (Gordonia phage Angelique, complete genome) position: , mismatch: 6, identity: 0.812

ggcacgccgctggcggcctccttgggggtcgg	CRISPR spacer
gggtcgccgctggcggcgtccttgcgggcctg	Protospacer
**  ************* ****** ***.* *

43. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to MK433274 (Gordonia phage Bradissa, complete genome) position: , mismatch: 6, identity: 0.812

ggcacgccgctggcggcctccttgggggtcgg	CRISPR spacer
gggtcgccgctggcggcgtccttgcgggcctg	Protospacer
**  ************* ****** ***.* *

44. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to MG872834 (Gordonia phage Confidence, complete genome) position: , mismatch: 6, identity: 0.812

ggcacgccgctggcggcctccttgggggtcgg	CRISPR spacer
gggtcgccgctggcggcgtccttgcgggcctg	Protospacer
**  ************* ****** ***.* *

45. spacer 29.20|8958877|31|NZ_CP012109|CRISPRCasFinder matches to MT952845 (Microbacterium phage GardenState, complete genome) position: , mismatch: 6, identity: 0.806

tcgacgtgcccgtcggcgtagtggaggcggt	CRISPR spacer
tcgatgcgcccgtcggcgtagtggatgaagc	Protospacer
****.*.****************** * .*.

46. spacer 29.20|8958877|31|NZ_CP012109|CRISPRCasFinder matches to MK880124 (Microbacterium phage IAmGroot, complete genome) position: , mismatch: 6, identity: 0.806

tcgacgtgcccgtcggcgtagtggaggcggt	CRISPR spacer
tcgatgcgcccgtcggcgtagtggatgaagc	Protospacer
****.*.****************** * .*.

47. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP015203 (Rhodococcus sp. 008 plasmid pR8L1, complete sequence) position: , mismatch: 6, identity: 0.812

cccagctc-gccggcggcgcggtacagctcggc	CRISPR spacer
-cgatcgcggccgtcggcgcggtactgctcggc	Protospacer
 * * * * **** *********** *******

48. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_007491 (Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence) position: , mismatch: 6, identity: 0.812

cccagctc-gccggcggcgcggtacagctcggc	CRISPR spacer
-cgatcgcggccgtcggcgcggtactgctcggc	Protospacer
 * * * * **** *********** *******

49. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP035507 (Haematobacter massiliensis strain OT1 plasmid pOT1-7, complete sequence) position: , mismatch: 6, identity: 0.812

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
cctggttcgctggcggcgcggtaaagctcgtc	Protospacer
**..*.****.************ ****** *

50. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_007764 (Rhizobium etli CFN 42 plasmid p42c, complete sequence) position: , mismatch: 6, identity: 0.818

gcggtcaccgtcgagcactcgcgc--cagctcgtt	CRISPR spacer
acggtcaccgccgagccctcgcgccgcacctcg--	Protospacer
.*********.***** *******  ** ****

51. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP020908 (Rhizobium etli strain NXC12 plasmid pRetNXC12b, complete sequence) position: , mismatch: 6, identity: 0.818

gcggtcaccgtcgagcactcgcgc--cagctcgtt	CRISPR spacer
acggtcaccgccgagccctcgcgccgcacctcg--	Protospacer
.*********.***** *******  ** ****

52. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP013597 (Rhizobium sp. N741 plasmid pRspN741b, complete sequence) position: , mismatch: 6, identity: 0.818

gcggtcaccgtcgagcactcgcgc--cagctcgtt	CRISPR spacer
acggtcaccgccgagccctcgcgccgcacctcg--	Protospacer
.*********.***** *******  ** ****

53. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP013501 (Rhizobium esperanzae strain N561 plasmid pRspN561a, complete sequence) position: , mismatch: 6, identity: 0.818

gcggtcaccgtcgagcactcgcgc--cagctcgtt	CRISPR spacer
acggtcaccgccgagccctcgcgccgcacctcg--	Protospacer
.*********.***** *******  ** ****

54. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP013507 (Rhizobium sp. N1341 plasmid pRspN1341b, complete sequence) position: , mismatch: 6, identity: 0.818

gcggtcaccgtcgagcactcgcgc--cagctcgtt	CRISPR spacer
acggtcaccgccgagccctcgcgccgcacctcg--	Protospacer
.*********.***** *******  ** ****

55. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP013518 (Rhizobium sp. N113 plasmid pRspN113a, complete sequence) position: , mismatch: 6, identity: 0.818

gcggtcaccgtcgagcactcgcgc--cagctcgtt	CRISPR spacer
acggtcaccgccgagccctcgcgccgcacctcg--	Protospacer
.*********.***** *******  ** ****

56. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP013491 (Rhizobium sp. N6212 plasmid pRspN6212a, complete sequence) position: , mismatch: 6, identity: 0.818

gcggtcaccgtcgagcactcgcgc--cagctcgtt	CRISPR spacer
acggtcaccgccgagccctcgcgccgcacctcg--	Protospacer
.*********.***** *******  ** ****

57. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP013496 (Rhizobium sp. N621 plasmid pRspN621a, complete sequence) position: , mismatch: 6, identity: 0.818

gcggtcaccgtcgagcactcgcgc--cagctcgtt	CRISPR spacer
acggtcaccgccgagccctcgcgccgcacctcg--	Protospacer
.*********.***** *******  ** ****

58. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP013591 (Rhizobium sp. N871 plasmid pRspN871a, complete sequence) position: , mismatch: 6, identity: 0.818

gcggtcaccgtcgagcactcgcgc--cagctcgtt	CRISPR spacer
acggtcaccgccgagccctcgcgccgcacctcg--	Protospacer
.*********.***** *******  ** ****

59. spacer 31.39|9242833|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP015237 (Rhodococcus fascians D188 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.818

-ccggccgcggagcgggtgttggtgccgttggtg	CRISPR spacer
gccagcag-ggagcgggtgtcggtgtcgttggtc	Protospacer
 **.** * ***********.****.*******

60. spacer 31.70|9245035|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_LR134469 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 27, complete sequence) position: , mismatch: 6, identity: 0.812

-cgcgtcgaggtgcagtgctcgtcgggcacgtc	CRISPR spacer
atgcg-cacggtgccgtgctcgtcggtcacgtc	Protospacer
 .*** *. ***** *********** ******

61. spacer 5.1|1288919|28|NZ_CP012109|PILER-CR matches to NZ_CP045373 (Sulfitobacter sp. THAF37 plasmid pTHAF37_a, complete sequence) position: , mismatch: 7, identity: 0.75

gccggggcccaagcccgcccggagcagc	CRISPR spacer
gccggggcccctgcccgcccggaagcct	Protospacer
**********  ***********.   .

62. spacer 5.1|1288919|28|NZ_CP012109|PILER-CR matches to KJ194582 (Mycobacterium phage Hawkeye, complete genome) position: , mismatch: 7, identity: 0.75

gccggggcccaagcccgcccggagcagc	CRISPR spacer
cgctgggcccaagcccgccaggagcgag	Protospacer
  * *************** *****..

63. spacer 5.2|1288997|28|NZ_CP012109|PILER-CR matches to NZ_CP038237 (Leisingera sp. NJS201 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.75

cccggcgcccaagcctgcccggagcagt	CRISPR spacer
ggaggcgcccaagcctggccggcgcatc	Protospacer
   ************** **** *** .

64. spacer 7.1|1830970|31|NZ_CP012109|CRISPRCasFinder matches to NZ_CP049358 (Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

gtcgggcccacgcagcccgccaccgtgtcgt	CRISPR spacer
tcggggccgacgccgcccgccaccgtgtaga	Protospacer
 . ***** **** ************** *

65. spacer 28.1|8920092|36|NZ_CP012109|PILER-CR,CRISPRCasFinder,CRT matches to KU728633 (Mycobacterium phage Bipper, complete genome) position: , mismatch: 7, identity: 0.806

ccctggtactcgtcgtgctccttgaccatgccccgg	CRISPR spacer
ccctggtactcgtcgtgacccttgaccgtcgcgcgc	Protospacer
***************** .********.*  * **

66. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 7, identity: 0.781

ggcacgccgctggcggcctccttgg--gggtcgg	CRISPR spacer
ggcacgccgctgacggccccctttgacggacc--	Protospacer
************.*****.**** *  **..*

67. spacer 29.42|8958521|33|NZ_CP012109|PILER-CR,CRT matches to MH651167 (Gordonia phage Angelique, complete genome) position: , mismatch: 7, identity: 0.788

ggcacgccgctggcggcctccttgggggtcggc	CRISPR spacer
gggtcgccgctggcggcgtccttgcgggcctgg	Protospacer
**  ************* ****** ***.* *

68. spacer 29.42|8958521|33|NZ_CP012109|PILER-CR,CRT matches to MK433274 (Gordonia phage Bradissa, complete genome) position: , mismatch: 7, identity: 0.788

ggcacgccgctggcggcctccttgggggtcggc	CRISPR spacer
gggtcgccgctggcggcgtccttgcgggcctgg	Protospacer
**  ************* ****** ***.* *

69. spacer 29.42|8958521|33|NZ_CP012109|PILER-CR,CRT matches to MG872834 (Gordonia phage Confidence, complete genome) position: , mismatch: 7, identity: 0.788

ggcacgccgctggcggcctccttgggggtcggc	CRISPR spacer
gggtcgccgctggcggcgtccttgcgggcctgg	Protospacer
**  ************* ****** ***.* *

70. spacer 29.47|8958877|32|NZ_CP012109|CRT,PILER-CR matches to MT952845 (Microbacterium phage GardenState, complete genome) position: , mismatch: 7, identity: 0.781

tcgacgtgcccgtcggcgtagtggaggcggta	CRISPR spacer
tcgatgcgcccgtcggcgtagtggatgaagcc	Protospacer
****.*.****************** * .*.

71. spacer 29.47|8958877|32|NZ_CP012109|CRT,PILER-CR matches to MK880124 (Microbacterium phage IAmGroot, complete genome) position: , mismatch: 7, identity: 0.781

tcgacgtgcccgtcggcgtagtggaggcggta	CRISPR spacer
tcgatgcgcccgtcggcgtagtggatgaagcc	Protospacer
****.*.****************** * .*.

72. spacer 31.10|9240765|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP047380 (Escherichia coli strain CAU16175 plasmid pCAU16175_2, complete sequence) position: , mismatch: 7, identity: 0.781

tccggactgcgttgaacaacctccgggcctga----	CRISPR spacer
tccggactgcgttaaacagcctc----gctgatact	Protospacer
*************.****.****     ****

73. spacer 31.15|9241124|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP050953 (Rhodococcus sp. DMU1 plasmid unnamed) position: , mismatch: 7, identity: 0.8

ctgcatggccgccaccagcggcgcgaggtagccgc-	CRISPR spacer
ctgcatggccgccaccaccggcacgtcg-agctggg	Protospacer
***************** ****.**  * ***.*

74. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

75. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

76. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

77. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

78. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

79. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

80. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

81. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

82. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

83. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

84. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

85. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

86. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

87. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

88. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

89. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

90. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

91. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

92. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

93. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

94. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

95. spacer 31.18|9241341|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.8

atctcggcgtcgaggagttgctcgcgc---gacaggtc	CRISPR spacer
agcgcggcgacgaggagtttctcgcgcgaagacag---	Protospacer
* * ***** ********* *******   *****

96. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_LR594663 (Variovorax sp. RA8 plasmid 2) position: , mismatch: 7, identity: 0.781

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
gtcttcgcgccggcggcgcggtgctgctcggc	Protospacer
 .*  * ***************.* *******

97. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_017805 (Deinococcus gobiensis I-0 plasmid P1, complete sequence) position: , mismatch: 7, identity: 0.781

cccagct---cgccggcggcgcggtacagctcggc	CRISPR spacer
---aactcgacgcccgccgcgcggtacagctcggg	Protospacer
   *.**   **** ** ****************

98. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 7, identity: 0.781

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
gcccggccgccggcgccgcggtacaggtcgcc	Protospacer
 ** * .******** ********** *** *

99. spacer 31.36|9242616|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.8

gtcccctcgtcgaacaccttcacgagattctcgac	CRISPR spacer
ggcctcgtgtcgaactgcttcacgagattctcgag	Protospacer
* **.* .*******  *****************

100. spacer 31.36|9242616|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.8

gtcccctcgtcgaacaccttcacgagattctcgac	CRISPR spacer
ggcctcgtgtcgaactgcttcacgagattctcgag	Protospacer
* **.* .*******  *****************

101. spacer 31.36|9242616|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.8

gtcccctcgtcgaacaccttcacgagattctcgac	CRISPR spacer
ggcctcgtgtcgaactgcttcacgagattctcgag	Protospacer
* **.* .*******  *****************

102. spacer 31.36|9242616|35|NZ_CP012109|CRISPRCasFinder,CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.8

gtcccctcgtcgaacaccttcacgagattctcgac	CRISPR spacer
ggcctcgtgtcgaactgcttcacgagattctcgag	Protospacer
* **.* .*******  *****************

103. spacer 31.36|9242616|35|NZ_CP012109|CRISPRCasFinder,CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.8

gtcccctcgtcgaacaccttcacgagattctcgac	CRISPR spacer
ggcctcgtgtcgaactgcttcacgagattctcgag	Protospacer
* **.* .*******  *****************

104. spacer 31.62|9244467|34|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.794

cgctcggcatggagtactgcggcaggcc----gtgcag	CRISPR spacer
cgctcagcatggagtactgcggcgggtccatggt----	Protospacer
*****.*****************.**.*    **

105. spacer 31.70|9245035|32|NZ_CP012109|CRISPRCasFinder,CRT matches to HM486077 (Tsukamurella phage TPA2, complete sequence) position: , mismatch: 7, identity: 0.781

cgcgtcgaggtgcagtgctcgtcgg-gcacgtc	CRISPR spacer
agcgtcgaggtgccgtgctcggcgatgtactt-	Protospacer
 ************ ******* **. *.** *

106. spacer 31.70|9245035|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_015210 (Tsukamurella phage TPA2, complete genome) position: , mismatch: 7, identity: 0.781

cgcgtcgaggtgcagtgctcgtcgg-gcacgtc	CRISPR spacer
agcgtcgaggtgccgtgctcggcgatgtactt-	Protospacer
 ************ ******* **. *.** *

107. spacer 7.1|1830970|31|NZ_CP012109|CRISPRCasFinder matches to NC_011981 (Agrobacterium vitis S4 plasmid pAtS4e, complete sequence) position: , mismatch: 8, identity: 0.742

gtcgggcccacgcagcccgccaccgtgtcgt	CRISPR spacer
ctcggggccacgcagcccgacaccaggtgcg	Protospacer
 ***** ************ ****. **

108. spacer 22.3|8609284|33|NZ_CP012109|CRISPRCasFinder matches to NC_021229 (Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919) position: , mismatch: 8, identity: 0.758

gacgtcacgctctccggtcaggcgacggacctg	CRISPR spacer
gtctgcccgctctccggtcaggcaccggaccgc	Protospacer
* *  * ****************. ******

109. spacer 28.22|8921611|36|NZ_CP012109|PILER-CR matches to NZ_CP016463 (Bosea sp. RAC05 plasmid pBSY19_1, complete sequence) position: , mismatch: 8, identity: 0.778

ttgagcgtgcccgccgaagtcggcgtacccgtcacg	CRISPR spacer
ttggaagtgcccgccgtcgtcggcgtacccgtgata	Protospacer
***.. **********  ************** *..

110. spacer 28.43|8923134|35|NZ_CP012109|PILER-CR matches to NC_011881 (Pseudarthrobacter chlorophenolicus A6 plasmid pACHL02, complete sequence) position: , mismatch: 8, identity: 0.771

tcacgcacccgggcgacctcgggggcaaggtacat	CRISPR spacer
gcgcccagccgggcgacctcggcggcaaggttcgc	Protospacer
 *.* ** ************** ******** *..

111. spacer 28.67|8921610|36|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP016463 (Bosea sp. RAC05 plasmid pBSY19_1, complete sequence) position: , mismatch: 8, identity: 0.778

ttgagcgtgcccgccgaagtcggcgtacccgtcacg	CRISPR spacer
ttggaagtgcccgccgtcgtcggcgtacccgtgata	Protospacer
***.. **********  ************** *..

112. spacer 28.88|8923133|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_011881 (Pseudarthrobacter chlorophenolicus A6 plasmid pACHL02, complete sequence) position: , mismatch: 8, identity: 0.771

tcacgcacccgggcgacctcgggggcaaggtacat	CRISPR spacer
gcgcccagccgggcgacctcggcggcaaggttcgc	Protospacer
 *.* ** ************** ******** *..

113. spacer 29.1|8957494|35|NZ_CP012109|CRISPRCasFinder matches to NZ_CP045361 (Roseivivax sp. THAF40 plasmid pTHAF40_a, complete sequence) position: , mismatch: 8, identity: 0.771

ttttcccgctcggccacgccgggcagggcgagcgt	CRISPR spacer
tagccgcgctcggccatggcgggcagggcgagccg	Protospacer
*  .* **********.* **************

114. spacer 29.1|8957494|35|NZ_CP012109|CRISPRCasFinder matches to NZ_CP045319 (Roseivivax sp. THAF197b plasmid pTHAF197b_a, complete sequence) position: , mismatch: 8, identity: 0.771

ttttcccgctcggccacgccgggcagggcgagcgt	CRISPR spacer
tagccgcgctcggccatggcgggcagggcgagccg	Protospacer
*  .* **********.* **************

115. spacer 29.1|8957494|35|NZ_CP012109|CRISPRCasFinder matches to NC_022044 (Paracoccus aminophilus JCM 7686 plasmid pAMI6, complete sequence) position: , mismatch: 8, identity: 0.771

ttttcccgctcggccacgccgggcagggcgagcgt	CRISPR spacer
tcgcctccctcggccacgccgggcaaagcgagcga	Protospacer
*. .*.* *****************..*******

116. spacer 29.1|8957494|35|NZ_CP012109|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

ttttcccgctcggccacgccgggcagggcgagcgt	CRISPR spacer
tcttgcgcctcggcaaagccgggcagggcgagcag	Protospacer
*.** *  ****** * ****************.

117. spacer 29.10|8958153|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 8, identity: 0.765

--ctgctactccgcccgactcgggtcgtccggggcc	CRISPR spacer
gcccgcca--gggccggactcgggtcgtccgcggcc	Protospacer
  *.**.*    *** *************** ****

118. spacer 29.20|8958877|31|NZ_CP012109|CRISPRCasFinder matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.742

tcgacgtgcccgtcggcgtagtggaggcggt	CRISPR spacer
aggacgtgccagtcggcgtactggacgatgg	Protospacer
  ******** ********* **** *  *

119. spacer 29.20|8958877|31|NZ_CP012109|CRISPRCasFinder matches to NC_014159 (Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete sequence) position: , mismatch: 8, identity: 0.742

tcgacgtgcccgtcggcgtagtggaggcggt	CRISPR spacer
aggatcatcccgtcggcgtagtagaggccgt	Protospacer
  **.   **************.***** **

120. spacer 29.47|8958877|32|NZ_CP012109|CRT,PILER-CR matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

tcgacgtgcccgtcggcgtagtgga-ggcggta	CRISPR spacer
aggacgtgccagtcggcgtactggacgatggc-	Protospacer
  ******** ********* **** *..**.

121. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP045548 (Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggggccaccggggtggtgctggggaccgcgggc	Protospacer
   ** . ********** **** *********

122. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_012987 (Methylorubrum extorquens AM1 plasmid p1METDI, complete sequence) position: , mismatch: 8, identity: 0.75

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
ttcggaaggccggcggcgcggtgcagcgcggc	Protospacer
..*.*   **************.**** ****

123. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP049358 (Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

--cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
aattcgg--cgcccgccgcgcggtacagctcggg	Protospacer
  ..*.*  **** ** ****************

124. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to CP036360 (Agrobacterium sp. 33MFTa1.1 plasmid p_JBx_073812, complete sequence) position: , mismatch: 8, identity: 0.75

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
ccccgctcgccggcgtcgcggtaccatacgca	Protospacer
*** *********** ******** .. **

125. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP032344 (Azospirillum brasilense strain MTCC4038 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.75

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
ccaagctcgccggccgcgcggtaccaggtcgc	Protospacer
** *********** ********* .  . **

126. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP033323 (Azospirillum brasilense strain Cd plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.75

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
ccaagctcgccggccgcgcggtaccaggtcgc	Protospacer
** *********** ********* .  . **

127. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP033317 (Azospirillum brasilense strain Sp 7 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.75

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
ccaagctcgccggccgcgcggtaccaggtcgc	Protospacer
** *********** ********* .  . **

128. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP031159 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence) position: , mismatch: 8, identity: 0.75

--cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
aattcgg--cgcccgccgcgcggtacagctcggg	Protospacer
  ..*.*  **** ** ****************

129. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP012919 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p5, complete sequence) position: , mismatch: 8, identity: 0.75

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
ccaagctcgccggccgcgcggtaccaggtcgc	Protospacer
** *********** ********* .  . **

130. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP014797 (Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence) position: , mismatch: 8, identity: 0.75

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
cgccgctcgccggtggcgcggtgcagcagcac	Protospacer
* * *********.********.****   .*

131. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to MF417927 (Uncultured Caudovirales phage clone 9F_2, partial genome) position: , mismatch: 8, identity: 0.75

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
agctggccgccggcggcgctgttcagctcgtc	Protospacer
  * * .************ ** ******* *

132. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP047178 (Rathayibacter sp. VKM Ac-2759 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

gcggtcaccgtcgagcactcgcgccagctcgtt	CRISPR spacer
gccgtcaccgtcgcgcactcgcgcggcgccggt	Protospacer
** ********** ********** .  .** *

133. spacer 31.39|9242833|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_008712 (Paenarthrobacter aurescens TC1 plasmid pTC1, complete sequence) position: , mismatch: 8, identity: 0.758

ccggccgcggagcgggtgttggtgccgttggtg	CRISPR spacer
cagttcgcggagcgggtgttgttgccggtgtcc	Protospacer
* * .**************** ***** ** .

134. spacer 31.48|9243470|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_008381 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence) position: , mismatch: 8, identity: 0.75

ctttcggaaccgcgcagcctgccgaacgctga	CRISPR spacer
ctcaccaaaccgcgcaggctgccgaaggcttc	Protospacer
**. * .********** ******** ***

135. spacer 31.55|9243971|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 8, identity: 0.75

tctgacgaggcgccccgcgagtggctcctccc	CRISPR spacer
ctgggccaggagccccgcgaggggctcctcgc	Protospacer
.. *.* *** ********** ******** *

136. spacer 32.1|9440551|33|NZ_CP012109|CRISPRCasFinder matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 8, identity: 0.758

cgggattaccgatgcgtccgagcccggcgcgca	CRISPR spacer
cgatgcgatcgatgcgttcgaggccggcgcgca	Protospacer
**. .. *.********.**** **********

137. spacer 28.16|8921180|35|NZ_CP012109|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.743

ttcttgatgttgtgatgcaggacgccgttgatgag	CRISPR spacer
tagtccacattgtgatgcaggatgccgttggtgat	Protospacer
*  *. *..*************.*******.***

138. spacer 28.16|8921180|35|NZ_CP012109|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 9, identity: 0.743

ttcttgatgttgtgatgcaggacgccgttgatgag	CRISPR spacer
tagtccacattgtgatgcaggatgccgttggtgat	Protospacer
*  *. *..*************.*******.***

139. spacer 28.18|8921326|35|NZ_CP012109|PILER-CR matches to MK416010 (Klebsiella phage ST11-OXA245phi3.2, complete genome) position: , mismatch: 9, identity: 0.743

cactcccagtggttgccgatggccgactggagaca	CRISPR spacer
ccgacccggtggttgccgatggtcgactgctgatc	Protospacer
*   ***.**************.******  **.

140. spacer 28.18|8921326|35|NZ_CP012109|PILER-CR matches to MK422448 (Klebsiella phage ST512-KPC3phi13.3, complete genome) position: , mismatch: 9, identity: 0.743

cactcccagtggttgccgatggccgactggagaca	CRISPR spacer
ccgacccggtggttgccgatggtcgactgctgatc	Protospacer
*   ***.**************.******  **.

141. spacer 28.63|8921325|35|NZ_CP012109|CRISPRCasFinder,CRT matches to MK416010 (Klebsiella phage ST11-OXA245phi3.2, complete genome) position: , mismatch: 9, identity: 0.743

cactcccagtggttgccgatggccgactggagaca	CRISPR spacer
ccgacccggtggttgccgatggtcgactgctgatc	Protospacer
*   ***.**************.******  **.

142. spacer 28.63|8921325|35|NZ_CP012109|CRISPRCasFinder,CRT matches to MK422448 (Klebsiella phage ST512-KPC3phi13.3, complete genome) position: , mismatch: 9, identity: 0.743

cactcccagtggttgccgatggccgactggagaca	CRISPR spacer
ccgacccggtggttgccgatggtcgactgctgatc	Protospacer
*   ***.**************.******  **.

143. spacer 29.1|8957494|35|NZ_CP012109|CRISPRCasFinder matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

ttttcccgctcggccacgccgggcagggcgagcgt	CRISPR spacer
atcgcgatctcgggctcgccgggcagggcgagcgc	Protospacer
 *. *   ***** * ******************.

144. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggcacgccgctggcggcctccttgggggtcgg	CRISPR spacer
ggcgcgccgctggcggcatccttcagttcgag	Protospacer
***.************* ***** .*  . .*

145. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 9, identity: 0.719

ggcacgccgctggcggcctccttgggggtcgg	CRISPR spacer
ggcgcgccgctggcggcatccttcagttcgag	Protospacer
***.************* ***** .*  . .*

146. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggcacgccgctggcggcctccttgggggtcgg	CRISPR spacer
ggctcgccgctggcggcatccttcagttcgag	Protospacer
*** ************* ***** .*  . .*

147. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to NZ_CP045329 (Labrenzia sp. THAF191b plasmid pTHAF191b_a, complete sequence) position: , mismatch: 9, identity: 0.719

ggcacg---ccgctggcggcctccttgggggtcgg	CRISPR spacer
---atgtgcccgctggcgacctcctcgggggtgaa	Protospacer
   *.*   *********.******.****** ..

148. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to NZ_CP045345 (Labrenzia sp. THAF187b plasmid pTHAF187b_a, complete sequence) position: , mismatch: 9, identity: 0.719

ggcacg---ccgctggcggcctccttgggggtcgg	CRISPR spacer
---atgtgcccgctggcgacctcctcgggggtgaa	Protospacer
   *.*   *********.******.****** ..

149. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to NZ_CP045335 (Labrenzia sp. THAF191a plasmid pTHAF191a_b, complete sequence) position: , mismatch: 9, identity: 0.719

ggcacg---ccgctggcggcctccttgggggtcgg	CRISPR spacer
---atgtgcccgctggcgacctcctcgggggtgaa	Protospacer
   *.*   *********.******.****** ..

150. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggcacgccgctggcggcctccttgggggtcgg	CRISPR spacer
ggcgcgccgctggcggcatccttcagttcgag	Protospacer
***.************* ***** .*  . .*

151. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggcacgccgctggcggcctccttgggggtcgg	CRISPR spacer
ggcgcgccgctggcggcatccttcagttcgag	Protospacer
***.************* ***** .*  . .*

152. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggcacgccgctggcggcctccttgggggtcgg	CRISPR spacer
ggctcgccgctggcggcgtccttcagttcgag	Protospacer
*** ************* ***** .*  . .*

153. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggcacgccgctggcggcctccttgggggtcgg	CRISPR spacer
ggctcgccgctggcggcgtccttcagttcgag	Protospacer
*** ************* ***** .*  . .*

154. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggcacgccgctggcggcctccttgggggtcgg	CRISPR spacer
ggctcgccgctggcggcatccttcagttcgag	Protospacer
*** ************* ***** .*  . .*

155. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ggcacgccgctggcggcctccttgggggtcgg	CRISPR spacer
ggctcgccgctggcggcgtccttcagttcgag	Protospacer
*** ************* ***** .*  . .*

156. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggcacgccgctggcggcctccttgggggtcgg	CRISPR spacer
ggctcgccgctggcggcgtccttcagttcgag	Protospacer
*** ************* ***** .*  . .*

157. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggcacgccgctggcggcctccttgggggtcgg	CRISPR spacer
ggctcgccgctggcggcatccttcagttcgag	Protospacer
*** ************* ***** .*  . .*

158. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ggcacgccgctggcggcctccttgggggtcgg	CRISPR spacer
ggctcgccgctggcggcgtccttcagttcgag	Protospacer
*** ************* ***** .*  . .*

159. spacer 29.15|8958521|32|NZ_CP012109|CRISPRCasFinder matches to NZ_LR026982 (Rhodoplanes piscinae isolate Rhod_plasmid plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcacgccgctggcggcctccttgggggtcgg	CRISPR spacer
gcttcgcggctggcggcctcgttggggcagcg	Protospacer
* . *** ************ ******    *

160. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

161. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

162. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

163. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

164. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

165. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

166. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

167. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

168. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

169. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

170. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

171. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

172. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

173. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

174. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

175. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

176. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

177. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

178. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

179. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

180. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

181. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

182. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

183. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

184. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

185. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

186. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

187. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

188. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

189. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

190. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

191. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

192. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

193. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

194. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

195. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

196. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

197. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

198. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

199. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

200. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

201. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

202. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

203. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

204. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

205. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

206. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

207. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

208. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

209. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

210. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

211. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

212. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

213. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

214. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

215. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

216. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

217. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

218. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

219. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

220. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

221. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

222. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

223. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

224. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

225. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

226. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

227. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

228. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

229. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

230. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

231. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

232. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

233. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

234. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

235. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

236. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

237. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

238. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

239. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

attcgg-agcaagtacgacgccttcgagcgcgcct	CRISPR spacer
-tacgacagcaagtacgacgccttcctgcgcaagc	Protospacer
 * **. ******************  ****.  .

240. spacer 29.28|8957494|36|NZ_CP012109|PILER-CR,CRT matches to NZ_CP045361 (Roseivivax sp. THAF40 plasmid pTHAF40_a, complete sequence) position: , mismatch: 9, identity: 0.75

ttttcccgctcggccacgccgggcagggcgagcgtg	CRISPR spacer
tagccgcgctcggccatggcgggcagggcgagccgc	Protospacer
*  .* **********.* **************

241. spacer 29.28|8957494|36|NZ_CP012109|PILER-CR,CRT matches to NZ_CP045319 (Roseivivax sp. THAF197b plasmid pTHAF197b_a, complete sequence) position: , mismatch: 9, identity: 0.75

ttttcccgctcggccacgccgggcagggcgagcgtg	CRISPR spacer
tagccgcgctcggccatggcgggcagggcgagccgc	Protospacer
*  .* **********.* **************

242. spacer 29.28|8957494|36|NZ_CP012109|PILER-CR,CRT matches to NC_022044 (Paracoccus aminophilus JCM 7686 plasmid pAMI6, complete sequence) position: , mismatch: 9, identity: 0.75

ttttcccgctcggccacgccgggcagggcgagcgtg	CRISPR spacer
tcgcctccctcggccacgccgggcaaagcgagcgac	Protospacer
*. .*.* *****************..*******

243. spacer 29.47|8958877|32|NZ_CP012109|CRT,PILER-CR matches to NC_014159 (Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete sequence) position: , mismatch: 9, identity: 0.719

tcgacgtgcccgtcggcgtagtggaggcggta	CRISPR spacer
aggatcatcccgtcggcgtagtagaggccgtt	Protospacer
  **.   **************.***** **

244. spacer 31.1|9240127|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

cagccgcgcagggacgggcagccgcagatgatg	CRISPR spacer
agcccgcgcagggacgggcggccccagcggccg	Protospacer
 . ****************.*** ***  * .*

245. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_KY401053 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE380 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

246. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_KX807610 (Salmonella enterica subsp. enterica serovar Enteritidis strain CNM4839/03 plasmid pUO-SeVR1, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

247. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_KT317612 (Salmonella enterica subsp. enterica serovar Enteritidis strain EC20120002 plasmid pSE12-2, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

248. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP018663 (Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-2, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

249. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP033089 (Salmonella enterica subsp. enterica serovar Enteritidis strain SEO plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

250. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP026054 (Salmonella enterica strain FDAARGOS_70 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

251. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP023437 (Salmonella enterica strain FORC_074 plasmid pFORC74_2, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

252. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP040645 (Salmonella enterica subsp. enterica serovar Enteritidis strain SAP18-0432 plasmid pCFSAN074386, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

253. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP018639 (Salmonella enterica subsp. enterica serovar Enteritidis strain 69-3861 plasmid pSE69-3861-2, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

254. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP025553 (Salmonella enterica subsp. enterica serovar Enteritidis strain ATCC BAA-708 plasmid pPIR00558, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

255. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to LR794377 (Salmonella Enteritidis) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

256. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP018653 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-2, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

257. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP028152 (Salmonella enterica subsp. enterica serovar Enteritidis str. RM2968 plasmid pRM2968-1, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

258. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP033342 (Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN076214 plasmid pCFSAN076214_2, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

259. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to HG970000 (Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 PT4 plasmid pSEN complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

260. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP026570 (Salmonella enterica strain MFDS1004839 plasmid pSE1004839, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

261. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP017233 (Salmonella enterica strain FORC_051 plasmid pFORC51, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

262. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
gtcgcgggcggggaggtggtggtcatcaacgat	Protospacer
 ************ ******** **.*.  *..

263. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP009767 (Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_007 plasmid pFORC7, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

264. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to KT317611 (Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090641 plasmid pSE9-641, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

265. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to KT317613 (Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120005 plasmid pSE12-5, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

266. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP012397 (Salmonella enterica strain FORC_019 plasmid pFORC19, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

267. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP015525 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF10978 plasmid pSJTUF10978, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

268. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP022004 (Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN051873 plasmid pCFSAN051873, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

269. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP030198 (Salmonella enterica strain SA20051401 plasmid pSA20051401.2, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

270. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP007508 (Salmonella enterica subsp. enterica serovar Enteritidis strain Durban plasmid, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

271. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP008927 (Salmonella enterica subsp. enterica serovar Enteritidis strain SEJ plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

272. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP041178 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367B, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

273. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP050708 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-2, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

274. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP015527 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF10984 plasmid pSJTUF10984, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

275. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP011395 (Salmonella enterica subsp. enterica serovar Enteritidis str. 18569 plasmid pCFSAN000006, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

276. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP007529 (Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_0968 isolate CDC_2010K-0968 plasmid p00, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

277. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP041972 (Salmonella enterica subsp. enterica serovar Enteritidis strain NCCP 16206 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

278. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to MN125607 (Salmonella enterica subsp. enterica serovar Enteritidis strain 1.1-2C7 plasmid p1.1-2C7, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

279. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to MN125608 (Salmonella enterica subsp. enterica serovar Enteritidis strain 1.05-1C8 plasmid p1.05-1C8, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

280. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to MN125609 (Salmonella enterica subsp. enterica serovar Enteritidis strain 1.15-2E5 plasmid p1.15-2E5, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

281. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP011943 (Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 plasmid virulence, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

282. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP020824 (Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN033541 plasmid pCFSAN033541, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

283. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP020826 (Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN033543 plasmid pCFSAN033543, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

284. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP013098 (Salmonella enterica subsp. enterica serovar Enteritidis strain CMCC50041 plasmid pCMCC50041, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

285. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP032850 (Salmonella enterica subsp. enterica serovar Enteritidis strain NCM 61 plasmid pM0061, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

286. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP050711 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-2, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

287. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to LN879484 (Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSEN-BT, strain D7795) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

288. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP018660 (Salmonella enterica subsp. enterica serovar Enteritidis strain 93-0639 plasmid pSE93-0639, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

289. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP018641 (Salmonella enterica subsp. enterica serovar Enteritidis strain 70-1605 plasmid pSE70-1605, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

290. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP050725 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-2, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

291. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_019120 (Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSENV, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

292. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP018636 (Salmonella enterica subsp. enterica serovar Enteritidis strain 56-3991 plasmid pSE56-3991, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

293. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP026714 (Salmonella enterica strain FORC_078 plasmid pFORC_078_2, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

294. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP018650 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1607 plasmid pSE81-1607-2, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

295. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP030796 (Salmonella enterica strain 2017K-0021 plasmid p2017K-0021, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

296. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

297. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP050722 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE81 plasmid pSE81-1, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

298. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP050718 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE95 plasmid pSE95-2, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

299. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP040647 (Salmonella enterica subsp. enterica serovar Enteritidis strain SAP18-H9654 plasmid pCFSAN074385, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

300. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP043434 (Salmonella enterica subsp. enterica serovar Enteritidis strain PT1 plasmid pPT1-1, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

301. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP025557 (Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p1PIR00532, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

302. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP017178 (Salmonella enterica strain FORC_056 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
ggcgcgggcggcgtggtggtggccacggtcagt	Protospacer
  ********* ********** *** *. .*.

303. spacer 31.11|9240834|37|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_004965 (Sinorhizobium meliloti plasmid pRm1132f, complete sequence) position: , mismatch: 9, identity: 0.757

cgcccccgg-----catcccccgcggcctcggcggcggcgtc	CRISPR spacer
-----gcggaacatcatcccccgcggcgtcgccggcggcgac	Protospacer
      ***     ************* *** ******** *

304. spacer 31.17|9241269|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP019873 (Pseudomonas syringae pv. tomato strain B13-200 plasmid pB13-200B, complete sequence) position: , mismatch: 9, identity: 0.743

gtcgaccagcccttgcacgcccaggtgctcgcccg	CRISPR spacer
tgcgcgcaggccgtgcacgcccaggtgctcgacga	Protospacer
  **  *** ** ****************** * .

305. spacer 31.17|9241269|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_KY362371 (Pseudomonas syringae pv. syringae strain UMAF1029 plasmid pPs1029, complete sequence) position: , mismatch: 9, identity: 0.743

gtcgaccagcccttgcacgcccaggtgctcgcccg	CRISPR spacer
tgcgcgcaggccatgcacgcccaggtgctcgacga	Protospacer
  **  *** ** ****************** * .

306. spacer 31.17|9241269|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_KY362370 (Pseudomonas syringae pv. syringae strain UMAF0158 plasmid pPs0158, complete sequence) position: , mismatch: 9, identity: 0.743

gtcgaccagcccttgcacgcccaggtgctcgcccg	CRISPR spacer
tgcgcgcaggccatgcacgcccaggtgctcgacga	Protospacer
  **  *** ** ****************** * .

307. spacer 31.17|9241269|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP005971 (Pseudomonas syringae UMAF0158 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gtcgaccagcccttgcacgcccaggtgctcgcccg	CRISPR spacer
tgcgcgcaggccatgcacgcccaggtgctcgacga	Protospacer
  **  *** ** ****************** * .

308. spacer 31.17|9241269|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_005205 (Pseudomonas syringae pv. syringae A2 plasmid pPSR1, complete sequence) position: , mismatch: 9, identity: 0.743

gtcgaccagcccttgcacgcccaggtgctcgcccg	CRISPR spacer
tgcgcgcaggccatgcacgcccaggtgctcgacga	Protospacer
  **  *** ** ****************** * .

309. spacer 31.17|9241269|35|NZ_CP012109|CRISPRCasFinder,CRT matches to LT985193 (Pseudomonas syringae strain CFBP 2116 genome assembly, plasmid: PP2) position: , mismatch: 9, identity: 0.743

gtcgaccagcccttgcacgcccaggtgctcgcccg	CRISPR spacer
tgcgcgcaggccatgcacgcccaggtgctcgacga	Protospacer
  **  *** ** ****************** * .

310. spacer 31.17|9241269|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_007275 (Pseudomonas savastanoi pv. phaseolicola 1448A plasmid small, complete sequence) position: , mismatch: 9, identity: 0.743

gtcgaccagcccttgcacgcccaggtgctcgcccg	CRISPR spacer
tgcgcgcaggccatgcacgcccaggtgctcgacga	Protospacer
  **  *** ** ****************** * .

311. spacer 31.19|9241413|34|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP022192 (Yangia pacifica strain YSBP01 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

tcgcggtaggtgcgcacgcgccgggtgctgttgg	CRISPR spacer
tcgcggtaggcgcgcacgcgcgggtcggggatct	Protospacer
**********.********** ** .*  * *

312. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
gggaagccgcccgcggcgcggaacagctcggt	Protospacer
   *. .**** ********* *********.

313. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_012849 (Ralstonia pickettii 12D plasmid pRp12D02, complete sequence) position: , mismatch: 9, identity: 0.719

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
tgccgctcgccggcggcgcggtgcggctgatg	Protospacer
. * ******************.*.*** .

314. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
tgctgctcgccggcgacgcggttcagcaggta	Protospacer
. * ***********.****** ****  *

315. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP019938 (Ketogulonicigenium robustum strain SPU_B003 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
agcggctcgccggtggcgcggttcagcaggta	Protospacer
  *.*********.******** ****  *

316. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 9, identity: 0.719

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
gcgcactcgccgccgccgcggtacagctggcg	Protospacer
 *  .******* ** ************ *

317. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
gggacgacaccggcggcgcgccacagctcggc	Protospacer
   *   *.*********** .**********

318. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_014214 (Meiothermus silvanus DSM 9946 plasmid pMESIL02, complete sequence) position: , mismatch: 9, identity: 0.719

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
agcgggcatccggcggcgcgggccagctcggc	Protospacer
  *.* .  ************  *********

319. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
gtcgcgccgccggtgtcgcggtacagctcgac	Protospacer
 .*.  .******.* **************.*

320. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_048782 (Rhodococcus phage Sleepyhead, complete genome) position: , mismatch: 9, identity: 0.719

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
gtcgcgccgccggtgtcgcggtacagctcgac	Protospacer
 .*.  .******.* **************.*

321. spacer 31.26|9241907|34|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.735

ttcggcatgttggcggacggcctggggctgtaat	CRISPR spacer
ttcggcgtgatggcggacggcctgggctgtcaga	Protospacer
******.** **************** .  .*.

322. spacer 31.26|9241907|34|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 9, identity: 0.735

ttcggcatgttggcggacggcctggggctgtaat	CRISPR spacer
ttcggcgtgatggcggacggcctgggctgtcaga	Protospacer
******.** **************** .  .*.

323. spacer 31.26|9241907|34|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 9, identity: 0.735

ttcggcatgttggcggacggcctggggctgtaat-	CRISPR spacer
cgcggcatggtggcgaacggcct-gggctacagca	Protospacer
. ******* *****.******* *****..*..

324. spacer 31.26|9241907|34|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 9, identity: 0.735

ttcggcatgttggcggacggcctggggctgtaat-	CRISPR spacer
cgcggcatggtggcgaacggcct-gggctacagca	Protospacer
. ******* *****.******* *****..*..

325. spacer 31.27|9241978|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.727

tgggtcaagcagcgtcacgcccaggaccccatc	CRISPR spacer
cgcgaaggccagcgtcacgcccagcaccccgtc	Protospacer
.* *  .. *************** *****.**

326. spacer 31.27|9241978|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

tgggtcaagcagcgtcacgcccaggaccccatc	CRISPR spacer
cagcaccagcatcgtcacgcccaggaccacact	Protospacer
..*  * **** **************** **..

327. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcaccgtcgagcactcgcgccagctcgtt	CRISPR spacer
gatgtcaccgtcgcgcacgcgcgccagcggtcc	Protospacer
*  ********** **** *********   ..

328. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcaccgtcgagcactcgcgccagctcgtt	CRISPR spacer
gatgtcaccgtcgcgcacgcgcgccagcggtcc	Protospacer
*  ********** **** *********   ..

329. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcaccgtcgagcactcgcgccagctcgtt	CRISPR spacer
gatgtcaccgtcgcgcacgcgcgccagcggtcc	Protospacer
*  ********** **** *********   ..

330. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcaccgtcgagcactcgcgccagctcgtt	CRISPR spacer
gatgtcaccgtcgcgcacgcgcgccagcggtcc	Protospacer
*  ********** **** *********   ..

331. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcaccgtcgagcactcgcgccagctcgtt	CRISPR spacer
gatgtcaccgtcgcgcacgcgcgccagcggtcc	Protospacer
*  ********** **** *********   ..

332. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcaccgtcgagcactcgcgccagctcgtt	CRISPR spacer
gatgtcaccgtcgcgcacgcgcgccagcggtcc	Protospacer
*  ********** **** *********   ..

333. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcaccgtcgagcactcgcgccagctcgtt	CRISPR spacer
gatgtcaccgtcgcgcacgcgcgccagcggtcc	Protospacer
*  ********** **** *********   ..

334. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcaccgtcgagcactcgcgccagctcgtt	CRISPR spacer
gatgtcaccgtcgcgcacgcgcgccagcggtcc	Protospacer
*  ********** **** *********   ..

335. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcaccgtcgagcactcgcgccagctcgtt	CRISPR spacer
gatgtcaccgtcgcgcacgcgcgccagcggtcc	Protospacer
*  ********** **** *********   ..

336. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcaccgtcgagcactcgcgccagctcgtt	CRISPR spacer
gatgtcaccgtcgcgcacgcgcgccagcggtcc	Protospacer
*  ********** **** *********   ..

337. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcaccgtcgagcactcgcgccagctcgtt	CRISPR spacer
gatgtcaccgtcgcgcacgcgcgccagcggtcc	Protospacer
*  ********** **** *********   ..

338. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcaccgtcgagcactcgcgccagctcgtt	CRISPR spacer
gatgtcaccgtcgcgcacgcgcgccagcggtcc	Protospacer
*  ********** **** *********   ..

339. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcaccgtcgagcactcgcgccagctcgtt	CRISPR spacer
gatgtcaccgtcgcgcacgcgcgccagcggtcc	Protospacer
*  ********** **** *********   ..

340. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcaccgtcgagcactcgcgccagctcgtt	CRISPR spacer
gatgtcaccgtcgcgcacgcgcgccagcggtcc	Protospacer
*  ********** **** *********   ..

341. spacer 31.31|9242263|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcaccgtcgagcactcgcgccagctcgtt	CRISPR spacer
gatgtcaccgtcgcgcacgcgcgccagcggtcc	Protospacer
*  ********** **** *********   ..

342. spacer 31.39|9242833|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 9, identity: 0.727

ccggccgcggagcgggtgttggtgccgttggtg	CRISPR spacer
tggtagagggagcgggtggtggtgccggtggtg	Protospacer
. *   . ********** ******** *****

343. spacer 31.39|9242833|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP021994 (Cryobacterium sp. LW097 plasmid unnamed1) position: , mismatch: 9, identity: 0.727

ccggccgcggagcgggtgttggtgccgttggtg	CRISPR spacer
gacgccccggaccgggtgttggtgccgggcgag	Protospacer
   *** **** ***************   * *

344. spacer 31.48|9243470|32|NZ_CP012109|CRISPRCasFinder,CRT matches to KX641262 (Mycobacterium phage Nazo, complete genome) position: , mismatch: 9, identity: 0.719

ctttcggaaccgcgcagcctgccgaacgctga	CRISPR spacer
cgctcggaaccgcgccgcccgccgaaccgccc	Protospacer
* .************ ***.*******  .

345. spacer 31.48|9243470|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_023692 (Mycobacterium phage BigNuz, complete genome) position: , mismatch: 9, identity: 0.719

ctttcggaaccgcgcagcctgccgaacgctga	CRISPR spacer
cgctcggaaccgcgccgcccgccgaaccgccc	Protospacer
* .************ ***.*******  .

346. spacer 31.48|9243470|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP049733 (Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence) position: , mismatch: 9, identity: 0.719

ctttcggaaccgcgcagcctgccgaacgctga	CRISPR spacer
ttcaccaaaccgcgcaggctgccgaaggcttc	Protospacer
.*. * .********** ******** ***

347. spacer 31.48|9243470|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_011984 (Agrobacterium vitis S4 plasmid pAtS4c, complete sequence) position: , mismatch: 9, identity: 0.719

ctttcggaaccgcgcagcctgccgaacgctga	CRISPR spacer
acgtcggatccgcgcggcctgccgaaggttcg	Protospacer
 . ***** ******.********** *.* .

348. spacer 31.48|9243470|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP053207 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence) position: , mismatch: 9, identity: 0.719

ctttcggaaccgcgcagcctgccgaacgctga	CRISPR spacer
ttcaccaaaccgcgcaggctgccgaaggcttc	Protospacer
.*. * .********** ******** ***

349. spacer 31.48|9243470|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ctttcggaaccgcgcagcctgccgaacgctga	CRISPR spacer
acttcggcaccgcgcagcatgccgatggcgcc	Protospacer
 .***** ********** ******  **

350. spacer 31.64|9244609|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 9, identity: 0.727

gcgcggaacggggcgctcgtgcaggtggtcaag	CRISPR spacer
gcgcggtaccgggcgctcgtgcagccgccgagc	Protospacer
****** ** ************** .* . *.

351. spacer 31.64|9244609|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 9, identity: 0.727

gcgcggaacggggcgctcgtgcaggtggtcaag	CRISPR spacer
gcgcggtaccgggcgctcgtgcagccgccgagc	Protospacer
****** ** ************** .* . *.

352. spacer 31.64|9244609|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 9, identity: 0.727

gcgcggaacggggcgctcgtgcaggtggtcaag	CRISPR spacer
gcgcggtaccgggcgctcgtgcagccgccgagc	Protospacer
****** ** ************** .* . *.

353. spacer 31.64|9244609|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 9, identity: 0.727

gcgcggaacggggcgctcgtgcaggtggtcaag	CRISPR spacer
gcgcggtaccgggcgctcgtgcagccgccgagc	Protospacer
****** ** ************** .* . *.

354. spacer 10.4|5112619|30|NZ_CP012109|CRT matches to NC_009936 (Pseudomonas phage LKA1, complete genome) position: , mismatch: 10, identity: 0.667

acaactgaagcactctcctgcgcgatagcc	CRISPR spacer
gacctcacagaactctcctgcgcgatagct	Protospacer
.   ... ** ******************.

355. spacer 10.4|5112619|30|NZ_CP012109|CRT matches to AM265639 (Pseudomonas phage LKA1 complete genome, specific host Pseudomonas aeruginosa) position: , mismatch: 10, identity: 0.667

acaactgaagcactctcctgcgcgatagcc	CRISPR spacer
gacctcacagaactctcctgcgcgatagct	Protospacer
.   ... ** ******************.

356. spacer 29.28|8957494|36|NZ_CP012109|PILER-CR,CRT matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.722

ttttcccgctcggccacgccgggcagggcgagcgtg	CRISPR spacer
atcgcgatctcgggctcgccgggcagggcgagcgct	Protospacer
 *. *   ***** * ******************.

357. spacer 30.4|8959597|33|NZ_CP012109|PILER-CR matches to NZ_CP025015 (Rhizobium leguminosarum strain Norway plasmid pRLN3, complete sequence) position: , mismatch: 10, identity: 0.697

gtcgaggaagtcatcctcgcgccacccgaccta	CRISPR spacer
atgcgaatcgtcatcctcgcgccacccggcgta	Protospacer
.*  ...  *******************.* **

358. spacer 31.8|9240623|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcgggcggggtggtggtgggcaccgcgggc	CRISPR spacer
cggccgggcggggtggtggcggccaccgtctgg	Protospacer
.   ***************.** *****.  *

359. spacer 31.11|9240834|37|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_021056 (Streptomyces sp. PAMC 26508 plasmid pSP01, complete sequence) position: , mismatch: 10, identity: 0.73

cgcccccggcatcccccgcggcctcggcggcggcgtc	CRISPR spacer
gctgtccgtcgtcccccgcggcctcggcggcgtaatc	Protospacer
  . .*** *.*********************  .**

360. spacer 31.11|9240834|37|NZ_CP012109|CRISPRCasFinder,CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 10, identity: 0.73

cgcccccggca--------tcccccgcggcctcggcggcggcgtc	CRISPR spacer
--------gcaagccaagttcccccgcggcctccgcagcggcgtc	Protospacer
        ***        ************** **.********

361. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP041156 (Leisingera aquaemixtae strain R2C4 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
gcatcggcgccggtggcgcggaacagctcgat	Protospacer
 *     ******.******* ********..

362. spacer 31.23|9241697|32|NZ_CP012109|CRISPRCasFinder,CRT matches to CP000665 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA04, complete sequence) position: , mismatch: 10, identity: 0.688

cccagctcgccggcggcgcggtacagctcggc	CRISPR spacer
gcatgctcggcggcagcgcggtacagcgaacg	Protospacer
 *  ***** ****.************  .

363. spacer 31.27|9241978|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.697

tgggtcaagcagcgtcacgcccaggaccccatc	CRISPR spacer
gtggtcgagcagcgacacgcccaggaagaagcc	Protospacer
  ****.******* ***********    ..*

364. spacer 31.36|9242616|35|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP040821 (Paraoceanicella profunda strain D4M1 plasmid pD4M1C, complete sequence) position: , mismatch: 10, identity: 0.714

gtcccctcgtcgaacaccttcacgagattctcgac	CRISPR spacer
tcgtcggcgtcgaacaccttcacgaagttctcggt	Protospacer
 . .*  ******************..******..

365. spacer 31.64|9244609|33|NZ_CP012109|CRISPRCasFinder,CRT matches to MN693279 (Marine virus AFVG_25M346, complete genome) position: , mismatch: 10, identity: 0.697

gcgcggaacggggcgctcgtgcaggtggtcaag	CRISPR spacer
aacaagcacggggcactcgtgcagatggtcatc	Protospacer
.   .* *******.*********.******

366. spacer 31.69|9244965|33|NZ_CP012109|CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.697

aaccaggacgccgaagctcagattctggcctgg	CRISPR spacer
gctcgtgacgccgtaggtcagattctggccgtc	Protospacer
. .*. ******* ** *************

367. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

attcggagcaagtacgacgccttcgagcgcgcct	CRISPR spacer
tatgacagcaagtacgacgccttcctgcgcaagc	Protospacer
  * . ******************  ****.  .

368. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 11, identity: 0.676

attcggagcaagtacgacgccttcgagcgcgcct	CRISPR spacer
tatgacagcaagtacgacgccttcctgcgcaagc	Protospacer
  * . ******************  ****.  .

369. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

attcggagcaagtacgacgccttcgagcgcgcct	CRISPR spacer
tatgacagcaagtacgacgccttcctgcgcaagc	Protospacer
  * . ******************  ****.  .

370. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 11, identity: 0.676

attcggagcaagtacgacgccttcgagcgcgcct	CRISPR spacer
tatgacagcaagtacgacgccttcctgcgcaagc	Protospacer
  * . ******************  ****.  .

371. spacer 29.17|8958665|34|NZ_CP012109|CRISPRCasFinder matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

attcggagcaagtacgacgccttcgagcgcgcct	CRISPR spacer
tatgacagcaagtacgacgccttcctgcgcaagc	Protospacer
  * . ******************  ****.  .

372. spacer 28.9|8920679|39|NZ_CP012109|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044976 (Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-1, complete sequence) position: , mismatch: 12, identity: 0.692

acagggaggggtgcgatggtggcgagcgtgcgcggcggt	CRISPR spacer
cgtgcttttggtgcgatggtggcgcgcgtgcgcagcgcc	Protospacer
   *     *************** ********.*** .

373. spacer 29.1|8957494|35|NZ_CP012109|CRISPRCasFinder matches to MF477236 (Nocardia phage NTR1, complete genome) position: , mismatch: 12, identity: 0.657

ttttcccgctcggccacgccgggcagggcgagcgt	CRISPR spacer
aacgtgtcatcggccacgccggggaggacgagcgg	Protospacer
  . . .  ************** ***.******

374. spacer 29.1|8957494|35|NZ_CP012109|CRISPRCasFinder matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 12, identity: 0.657

ttttcccgctcggccacgccgggcagggcgagcgt	CRISPR spacer
gccatccggtcggccatgccgggcagggcggttcc	Protospacer
 .. .*** *******.*************. . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2403138 : 2446242

Agrobacterium_phage(42.86%)

protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002640383.1\|2403138_2403504_+\|transposase	transposase	NA	NA	NA	NA
WP_144429523.1\|2403516_2404506_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_082282716.1\|2405781_2406687_+	ATP-binding protein	NA	NA	NA	NA
WP_002639817.1\|2406800_2408696_-	hypothetical protein	NA	NA	NA	NA
WP_144429524.1\|2408856_2409168_+	hypothetical protein	NA	NA	NA	NA
WP_144429525.1\|2411381_2411756_+	hypothetical protein	NA	NA	NA	NA
WP_044890883.1\|2415256_2415484_-	hypothetical protein	NA	NA	NA	NA
WP_193409837.1\|2416023_2416284_+	hypothetical protein	NA	NA	NA	NA
WP_002639825.1\|2417299_2418256_+	pirin family protein	NA	NA	NA	NA
WP_044890892.1\|2418262_2420215_-	ATP-dependent DNA helicase RecQ	F2NZ48	Diadromus_pulchellus_ascovirus	7.9e-60	43.1
WP_021781557.1\|2420223_2421114_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_021781556.1\|2421213_2422362_+	saccharopine dehydrogenase NADP-binding domain-containing protein	NA	NA	NA	NA
WP_002639829.1\|2422373_2424047_+	amidase	NA	NA	NA	NA
WP_002639830.1\|2424201_2425671_+	glycoside hydrolase family 6 protein	NA	NA	NA	NA
WP_044890882.1\|2425696_2427160_-	MFS transporter	NA	NA	NA	NA
WP_002639832.1\|2427310_2427877_-	hypothetical protein	NA	NA	NA	NA
WP_002639833.1\|2427950_2428385_-	hypothetical protein	NA	NA	NA	NA
WP_002639834.1\|2428550_2431205_+\|protease	ATP-dependent Clp protease ATP-binding subunit	K4FB40	Cronobacter_phage	4.0e-131	40.5
WP_021781555.1\|2431302_2431935_+	hypothetical protein	NA	NA	NA	NA
WP_002639836.1\|2431931_2432393_+	(2Fe-2S)-binding protein	A0A0P0IVM8	Acinetobacter_phage	2.6e-14	34.2
WP_002639837.1\|2432403_2434665_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
WP_002639838.1\|2434736_2435735_-	hypothetical protein	NA	NA	NA	NA
WP_044890881.1\|2435943_2436444_+	flavin reductase family protein	NA	NA	NA	NA
WP_002639840.1\|2436468_2437050_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.4e-44	47.0
WP_002639841.1\|2437105_2439400_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	9.3e-60	30.8
WP_002639842.1\|2439401_2442788_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	6.8e-67	29.5
WP_044890880.1\|2442792_2446242_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	2.7e-55	29.3

DBSCAN-SWA_2

6161711 : 6169541

Acanthamoeba_polyphaga_mimivirus(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002640712.1\|6161711_6163403_+	serine/threonine protein kinase	A0A0G2Y7N1	Acanthamoeba_polyphaga_mimivirus	5.7e-14	30.2
WP_044890717.1\|6164103_6164592_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.7e-32	50.0
WP_002640715.1\|6164588_6165467_-	pantoate--beta-alanine ligase	NA	NA	NA	NA
WP_002640716.1\|6165469_6166387_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	4.7e-47	38.4
WP_002640717.1\|6166548_6167193_-	deoxynucleoside kinase	A0A288TXV5	Enterococcus_phage	1.4e-16	33.8
WP_044890716.1\|6167404_6167686_+	hypothetical protein	NA	NA	NA	NA
WP_002640719.1\|6167689_6168532_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	E4ZFQ0	Streptococcus_phage	4.1e-13	32.6
WP_002640720.1\|6168545_6169541_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	1.3e-74	46.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP012109

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection