CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP008827	Klebsiella pneumoniae subsp. pneumoniae KPNIH1 chromosome, complete genome	3 crisprs	cas3,DEDDh,WYL,RT,DinG,csa3	1	14
NZ_CP008828	Klebsiella pneumoniae subsp. pneumoniae KPNIH1 plasmid pAAC154-a50, complete sequence	0 crisprs	NA	0	0
NZ_CP008829	Klebsiella pneumoniae subsp. pneumoniae KPNIH1 plasmid pKPN-498, complete sequence	0 crisprs	cas3,csa3,RT	0	3
NZ_CP008830	Klebsiella pneumoniae subsp. pneumoniae KPNIH1 plasmid pKpQIL-6e6, complete sequence	0 crisprs	NA	0	2

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP008827_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008827_1

813114-813199

Orphan

Consensus_repeat	Method
AATAAAAACCATAAAAACCACAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008827_1

>merge|NZ_CP008827|1|813114-813199|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGTCATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCGAATAAAAACCATAAAAACCATAGT

>NZ_CP008827|1|1|813114-813199|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGT	CATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCG
AATAAAAACCATAAAAACCATAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008827.1\|WP_004147026.1\|807206_809555_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP008827.1\|WP_002888347.1\|814840_815380_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP008827.1\|WP_002888332.1\|809798_810626_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP008827.1\|WP_002888340.1\|811346_812972_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP008827.1\|WP_002888357.1\|822586_824089_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP008827.1\|WP_002888348.1\|815454_816114_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP008827.1\|WP_004219851.1\|825990_826161_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008827.1\|WP_002888329.1\|805865_807152_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP008827.1\|WP_002888324.1\|804052_804874_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP008827.1\|WP_002888353.1\|821753_822449_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP008827.1\|WP_002888321.1\|802819_803668_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP008827.1\|WP_002888337.1\|810658_811357_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP008827.1\|WP_002888327.1\|804870_805860_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP008827.1\|WP_002888368.1\|824099_825809_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP008827.1\|WP_002888349.1\|819220_821578_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP008827.1\|WP_004151368.1\|816126_819033_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP008827.1\|WP_002888345.1\|813296_814661_+\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_CP008827.1\|WP_002888320.1\|802084_802564_+\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP008827.1\|WP_002888370.1\|826146_826992_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP008827.1\|WP_002888323.1\|803672_804050_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098

Protein	Function_ID	Function_description	E-value
NZ_CP008827.1\|WP_004147026.1\|807206_809555_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP008827.1\|WP_002888347.1\|814840_815380_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP008827.1\|WP_002888332.1\|809798_810626_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP008827.1\|WP_002888340.1\|811346_812972_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
NZ_CP008827.1\|WP_002888357.1\|822586_824089_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP008827.1\|WP_002888348.1\|815454_816114_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
NZ_CP008827.1\|WP_002888329.1\|805865_807152_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP008827.1\|WP_002888324.1\|804052_804874_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP008827.1\|WP_002888353.1\|821753_822449_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP008827.1\|WP_002888321.1\|802819_803668_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP008827.1\|WP_002888337.1\|810658_811357_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP008827.1\|WP_002888327.1\|804870_805860_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP008827.1\|WP_002888368.1\|824099_825809_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP008827.1\|WP_002888349.1\|819220_821578_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP008827.1\|WP_004151368.1\|816126_819033_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP008827.1\|WP_002888345.1\|813296_814661_+\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_CP008827.1\|WP_002888320.1\|802084_802564_+\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP008827.1\|WP_002888370.1\|826146_826992_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP008827.1\|WP_002888323.1\|803672_804050_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74

>NZ_CP008827.1|WP_002888340.1|811346_812972_-|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>NZ_CP008827.1|WP_002888337.1|810658_811357_-|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP008827.1|WP_002888332.1|809798_810626_+|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP008827.1|WP_004147026.1|807206_809555_-|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP008827.1|WP_002888329.1|805865_807152_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP008827.1|WP_002888327.1|804870_805860_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP008827.1|WP_002888324.1|804052_804874_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP008827.1|WP_002888323.1|803672_804050_-|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP008827.1|WP_002888321.1|802819_803668_-|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP008827.1|WP_002888320.1|802084_802564_+|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP008827.1|WP_002888345.1|813296_814661_+|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP008827.1|WP_002888347.1|814840_815380_+|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP008827.1|WP_002888348.1|815454_816114_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP008827.1|WP_004151368.1|816126_819033_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP008827.1|WP_002888349.1|819220_821578_-|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP008827.1|WP_002888353.1|821753_822449_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP008827.1|WP_002888357.1|822586_824089_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP008827.1|WP_002888368.1|824099_825809_-|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>NZ_CP008827.1|WP_004219851.1|825990_826161_-|hypothetical-protein
MRFGHTRGSPRRYQWHQLSIFIILSLSALSRLRRRWEFGEKPAQQAKKAPAACIPP
>NZ_CP008827.1|WP_002888370.1|826146_826992_+|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE

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Crispr_ID: NZ_CP008827_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008827_2

1297085-1297180

Orphan

Consensus_repeat	Method
TTGTGCCAACAGAATGCCAACAAAGTGCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008827_2

>merge|NZ_CP008827|2|1297085-1297180|CRISPRCasFinder
TTGTGCCAACAGAATGCCAACAAAGTGCCAACGCAAACCCAGTAACCACGCTGCGTACCGGCGAGGTTGTGCCAACAGAATGCCAACAAAGTGCCA

>NZ_CP008827|2|2|1297085-1297180|CRISPRCasFinder
TTGTGCCAACAGAATGCCAACAAAGTGCCA	ACGCAAACCCAGTAACCACGCTGCGTACCGGCGAGG
TTGTGCCAACAGAATGCCAACAAAGTGCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008827.1\|WP_004151298.1\|1296551_1296698_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008827.1\|WP_004151285.1\|1303325_1303463_+\|YlcG-family-protein	unknown	unknown	unknown
NZ_CP008827.1\|WP_004151302.1\|1294480_1294591_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008827.1\|WP_004151306.1\|1292382_1293063_-\|YqaJ-viral-recombinase-family-protein	unknown	unknown	gnl\|CDD\|378216
NZ_CP008827.1\|WP_004151305.1\|1293059_1293905_-\|phage-recombination-protein-Bet	unknown	unknown	gnl\|CDD\|273871
NZ_CP008827.1\|WP_004151303.1\|1294293_1294488_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008827.1\|WP_004151304.1\|1293920_1294205_-\|host-nuclease-inhibitor-GamL	unknown	unknown	unknown
NZ_CP008827.1\|WP_004151293.1\|1299912_1300755_+\|translation-repressor-RelE	unknown	unknown	gnl\|CDD\|379401
NZ_CP008827.1\|WP_004151301.1\|1294587_1294803_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008827.1\|WP_001548453.1\|1296244_1296466_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|336083
NZ_CP008827.1\|WP_004151284.1\|1303455_1303986_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|379158
NZ_CP008827.1\|WP_004151295.1\|1299009_1299303_+\|protein-ren	unknown	unknown	gnl\|CDD\|238042
NZ_CP008827.1\|WP_004151294.1\|1299299_1299806_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008827.1\|WP_004151291.1\|1300927_1301575_+\|DUF551-domain-containing-protein	unknown	unknown	gnl\|CDD\|367946
NZ_CP008827.1\|WP_004151286.1\|1302693_1303329_+\|protein-ninG	unknown	unknown	gnl\|CDD\|368603
NZ_CP008827.1\|WP_004230547.1\|1297594_1299010_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274672
NZ_CP008827.1\|WP_004151300.1\|1295153_1295843_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
NZ_CP008827.1\|WP_004151287.1\|1302530_1302701_+\|NinE-family-protein	unknown	unknown	gnl\|CDD\|182029
NZ_CP008827.1\|WP_004151288.1\|1302075_1302531_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182057
NZ_CP008827.1\|WP_004151299.1\|1295970_1296204_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|374243

Protein	Function_ID	Function_description	E-value
NZ_CP008827.1\|WP_004151295.1\|1299009_1299303_+\|protein-ren	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	0.000668668
NZ_CP008827.1\|WP_004151306.1\|1292382_1293063_-\|YqaJ-viral-recombinase-family-protein	gnl\|CDD\|378216	pfam09588, YqaJ, YqaJ-like viral recombinase domain. This protein family is found in many different bacterial species but is of viral origin. The protein forms an oligomer and functions as a processive alkaline exonuclease that digests linear double-stranded DNA in a Mg(2+)-dependent reaction, It has a preference for 5'-phosphorylated DNA ends. It thus forms part of the two-component SynExo viral recombinase functional unit.	1.68114e-32
NZ_CP008827.1\|WP_004151305.1\|1293059_1293905_-\|phage-recombination-protein-Bet	gnl\|CDD\|273871	TIGR01913, Uncharacterized_protein_UU154, phage recombination protein Bet. This model represents the phage recombination protein Bet from a number of phage, including phage lambda. All members of this family are found in phage genomes or in putative prophage regions of bacterial genomes. [Mobile and extrachromosomal element functions, Prophage functions].	3.75286e-34
NZ_CP008827.1\|WP_004151293.1\|1299912_1300755_+\|translation-repressor-RelE	gnl\|CDD\|379401	pfam13935, Ead_Ea22, Ead/Ea22-like protein. This family contains phage proteins and bacterial proteins that are likely to represent integrated phage proteins. This family includes the Lambda phage Ea22 early protein as well as the Bacteriophage P22 Ead protein.	0.000117969
NZ_CP008827.1\|WP_001548453.1\|1296244_1296466_+\|hypothetical-protein	gnl\|CDD\|336083	pfam05269, Phage_CII, Bacteriophage CII protein. This family consists of several phage CII regulatory proteins. CII plays a key role in the lysis-lysogeny decision in bacteriophage lambda and related phages.	1.55058e-09
NZ_CP008827.1\|WP_004151284.1\|1303455_1303986_+\|HNH-endonuclease	gnl\|CDD\|379158	pfam13392, HNH_3, HNH endonuclease. This is a zinc-binding loop of Fold group 7 as found in endo-deoxy-ribonucleases and HNH nucleases.	8.84074e-15
NZ_CP008827.1\|WP_004151291.1\|1300927_1301575_+\|DUF551-domain-containing-protein	gnl\|CDD\|367946	pfam04448, DUF551, Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	8.71432e-11
NZ_CP008827.1\|WP_004151286.1\|1302693_1303329_+\|protein-ninG	gnl\|CDD\|368603	pfam05766, NinG, Bacteriophage Lambda NinG protein. NinG or Rap is involved in recombination. Rap (recombination adept with plasmid) increases lambda-by-plasmid recombination catalyzed by Escherichia coli's RecBCD pathway.	9.44908e-60
NZ_CP008827.1\|WP_004230547.1\|1297594_1299010_+\|AAA-family-ATPase	gnl\|CDD\|274672	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model. [Mobile and extrachromosomal element functions, Prophage functions].	9.32956e-159
NZ_CP008827.1\|WP_004151300.1\|1295153_1295843_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	1.58097e-27
NZ_CP008827.1\|WP_004151287.1\|1302530_1302701_+\|NinE-family-protein	gnl\|CDD\|182029	PRK09689, PRK09689, prophage protein NinE; Provisional.	1.47696e-19
NZ_CP008827.1\|WP_004151288.1\|1302075_1302531_+\|hypothetical-protein	gnl\|CDD\|182057	PRK09741, PRK09741, hypothetical protein; Provisional.	1.50704e-78
NZ_CP008827.1\|WP_004151299.1\|1295970_1296204_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|374243	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	9.32854e-22

>NZ_CP008827.1|WP_004151298.1|1296551_1296698_+|hypothetical-protein
MPKSNRFYQAQTHKNVTRDRFIRSVNPVVGMKMRAILEELKRKEEGRE
>NZ_CP008827.1|WP_001548453.1|1296244_1296466_+|hypothetical-protein
MESSTTRNKVEARRIESWLHSQIAELGTTNIAKVAGVNKSTVSRWRESLLPNMSLLLAILISNRPGEKGDFEA
>NZ_CP008827.1|WP_004151299.1|1295970_1296204_+|helix-turn-helix-domain-containing-protein
MKNPAVEKAISIAGSQKELAKRCGKAQSTICDWLNGKKRISPVHVPDLVAAVNGEIKAYEFRPDLPSIFPPPNNSAA
>NZ_CP008827.1|WP_004151300.1|1295153_1295843_-|helix-turn-helix-transcriptional-regulator
MDFSERLARAMSLAGYTQGRLAKEVGMAQSSVNKLLNGANGSRKTVEIASVLGVRPEWLSTGAGEMLADSIQITQMQTPVTPQNGIYRVDVLDVKASAGPGALITNDFIETIRAIEYTSEQARSLFGNRPAHHIKVITVTGDSMDTTISPGDEIFVDISSTHFDSDGVYVFVFGKTLHVKRLQMQRDRLAVISDNPIYEKWYVEPGDEDQFYVMARVLLRQSIEYKRFA
>NZ_CP008827.1|WP_004151301.1|1294587_1294803_-|hypothetical-protein
MSKENNGGPAYPTQGYEGLTVRDYFAAKAMQGWLAGYPAGINHPARSEEGFTVAELSYLMADAMLKAREEV
>NZ_CP008827.1|WP_004151302.1|1294480_1294591_-|hypothetical-protein
MSKQGIRSLIYCLLICGVIWSAVVIKILHATGVFNG
>NZ_CP008827.1|WP_004151303.1|1294293_1294488_-|hypothetical-protein
MANSIPNNGRAVMMRNRRTGAAWLVSFDYRDGSYWHEPQGNLRHIRRPYASRSIEPNLVPAGTH
>NZ_CP008827.1|WP_004151304.1|1293920_1294205_-|host-nuclease-inhibitor-GamL
MNAYRAYDVIEERKWAEQTLTEEKQKWIEDRAKEVFDSLPEDPYAALRQSVSSKSFPYEGLRSDKAGEVYNDLRTAIAYAQAEYDWDHRTGCPF
>NZ_CP008827.1|WP_004151305.1|1293059_1293905_-|phage-recombination-protein-Bet
MANELVITASSLAERGIDGATWSALKNSIYPGAKDESVMMALDYCRARNLDPLLKPVHLVPMSVKDSKSGKSEWRDVVMPGIGLYRIQADRSGDYAGAKEPEFGPDVTLTLTGIEVTVPQWCKYTVSKRMPSGEIVEFSAKEYWVENYATAGRDTTAPNAMWKKRPYGQLAKCAEAQALRKAWPEIGQQPTAEEMEGKTLEVDARDVTPRSTPEAPPLVASEETLQAITDLLTSLNKDWEQDFLPLCSNIFKRDIFQASQLTEEEAQKGFSFLQKKAQVAA
>NZ_CP008827.1|WP_004151306.1|1292382_1293063_-|YqaJ-viral-recombinase-family-protein
MTPEIILERTGIDVTRVEQGDESWHRLRLGVITASEVHNVISKPKSGKKWTDMKMSYFLTLLAEVCTGVAPEVNAKALAWGKQYEADARTLFEFTTDVKVTESPILFRDEGMRTACSPDGLCSDGRGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQVQFSMWVTGKDAWYFANYDPRMKREGIHHVVVERDDKYMSDFNEMVPEFISKMDESLAEIGFTFGEQWK
>NZ_CP008827.1|WP_004230547.1|1297594_1299010_+|AAA-family-ATPase
MTPPHSIEAEQSVLGGLLLDDDNSERTQKVLSILKPESFYARPHQVIFAEMRQMYRDHKPVDLLTLFDALESKGLTETVGGFAYLAEMSKNTPSAANIVAYAMRVRETAMERYGIEKTTKAIELLYARNGMTAEQKFDAIQGLFTEITEHVKTGRRTGLRTFYDAVTDWSAEFDERLKPDGRSRGLSTGIRSLDELLGVKRIVRGSLFVIGARPKMGKTTLYTQMGINCATVENEPALMFSLEMPEGQMVEKITAQKGRISPNLFYPDMTKDDYGYRGDWNSDLQKATGVMGALIETNNLLIDDTPGISLAHVMAESRRIKRERGKVGMILVDYLTLMTADKAERNDLAYGLITKGLKILAKELDCVVVLLTQLNRDLEKRTNKRPLPSDSRDTGQIEQDCDYWLAIYREGAYDENANQSDTELLLRLNRHGETGVVYCEQRHGAIYDCDQEAASQRRREKEQKPTKRGGF
>NZ_CP008827.1|WP_004151295.1|1299009_1299303_+|protein-ren
MTGKDAILNYLKTHKTCSSPDVAAASGMTHTCINQAANILAKQGVLVAEARVWRTVYYRLATEEEIAGRKSTNQIFNECRQSPAMKRVLAVYGRTSA
>NZ_CP008827.1|WP_004151294.1|1299299_1299806_+|hypothetical-protein
MTITLQAVNKLIASMESAGELSIREQKFLKLAKEFRICSASLDAAIKTGNMLADQNAQLAAENVALKDINAWCKTDAFKNMYREFKTAEALGCSDADCMHDAMLVAIMHAPATPATDRIVAGIKADGVEEFAAKLRIPGDDQFFDALAKGIALAADDFAKQLREGADK
>NZ_CP008827.1|WP_004151293.1|1299912_1300755_+|translation-repressor-RelE
MTDITELAQSLKAAAEKASNGDWVKESGDGWEACCSANDQANGGFIIAHFVGPDAAENCEFVQAANPANVLALVEALEYYKSREERVTSLVRDNSKSWDELYRQVEAKGKRNVELVEALESEKRICATWRKTAESTSEKLEKAQAAERRWHRVASRVHEQACESDVKIDELEAIRAAAEKLVRCKGRYHSEQNYRALAALFGVNTPDLPPLEHENVHYADAAEMEIEALRQRIAELESRTVKLPPRVDSSNVPFAGNAWNCCLDEVEKRLTAAGIKMEAE
>NZ_CP008827.1|WP_004151291.1|1300927_1301575_+|DUF551-domain-containing-protein
MTNNQLAENSVIQLLNSVKLARDNAELADNRVDHSFYYALTIALEELQERRKAAMDSEPVLWAWHHLDMWHVTSHDGRARDLWLSGFKVIPLYRHAQPVLVIPDEMTAEQAYEIGYYYGDPVDVFARGANWMRQHIIDSTLAAAPQSPGSDPATVPGKWISVSERMPENDGAYLCWDNRYVTTYAFIFGAWQANQFIAKNITHWMPLPAGPQEVR
>NZ_CP008827.1|WP_004151288.1|1302075_1302531_+|hypothetical-protein
MNIPQCGIKLHNGNFSAIGKILQEQLSDGKCLRLQVKEWREKRSLSQNALSHMWYAEISEYLINSGRTDATPEWVKRNLKKTYLGCEEVTYTDFITGEKTTTWEPRHTSDLDTGEMHIFLTKVEAWCAQFGLALTIPHGCEYQQLQQKQEA
>NZ_CP008827.1|WP_004151287.1|1302530_1302701_+|NinE-family-protein
MSSLLAKVIERGIFRVPARRKRKVEDKPSDIPTLKDYTARLVDKKWLRLRARRPHA
>NZ_CP008827.1|WP_004151286.1|1302693_1303329_+|protein-ninG
MRKPARRKCAHCREWFHPAREGQVVCSFECASAIGKKQTAKAREAAKARAVKRQRESEKEGRQRRKARLAELRPNGYYKAQAQKAFNAYIRARDAALPCISCGETNPPDLHGGQWDCGHFKTVGAYPELRFEERNAHKQCKSCNAGAGKYTAKELTVAQQYEAGLVARYGQEYVDWLNGPHEMTNYRREDFIRIRDEYRAKLKALKQREAA
>NZ_CP008827.1|WP_004151285.1|1303325_1303463_+|YlcG-family-protein
MNHDIIERIRDRWKKLRLLRSRGTVLVDYLILRNFIASLSRGSYE
>NZ_CP008827.1|WP_004151284.1|1303455_1303986_+|HNH-endonuclease
MSKSEKSITQELLRTLLEYDPQTGIFRWKIKASSSAHPGDIAGCIDGQGYRVIRIYGKNRKAHRLAWLYVYGDEPEVIDHIDRNRSNNAIENLRAVTFSQNSANRAAKSKNKSGFTGVYWNELGKKWQASIVANGRTHYVGLFATAQEAAKARTEYARQLYANFYIPSFHDQEAAK

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Crispr_ID: NZ_CP008827_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008827_3

1682870-1682947

Orphan

Consensus_repeat	Method
AAGGCGTCAGCCGCCGCCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008827_3

>merge|NZ_CP008827|3|1682870-1682947|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCAAAATAACCGCGCAATAGCACCGTAGGCCGGGCAAGGCGTCAGCCGCCGCCCGGCA

>NZ_CP008827|3|3|1682870-1682947|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCA	AAATAACCGCGCAATAGCACCGTAGGCCGGGC
AAGGCGTCAGCCGCCGCCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008827.1\|WP_004153329.1\|1674426_1675746_+\|imidazolonepropionase	unknown	unknown	gnl\|CDD\|236478
NZ_CP008827.1\|WP_004151700.1\|1686186_1687344_+\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP008827.1\|WP_004229842.1\|1670495_1670642_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008827.1\|WP_004147672.1\|1680938_1682321_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
NZ_CP008827.1\|WP_002895578.1\|1683646_1684936_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_CP008827.1\|WP_014342949.1\|1678378_1679317_+\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
NZ_CP008827.1\|WP_002895652.1\|1689548_1689761_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008827.1\|WP_002895358.1\|1676760_1677486_+\|histidine-utilization-repressor	unknown	unknown	gnl\|CDD\|184961
NZ_CP008827.1\|WP_002895655.1\|1690172_1692194_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP008827.1\|WP_004142100.1\|1687327_1688083_+\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP008827.1\|WP_002895658.1\|1692442_1693540_-\|two-component-system-sensor-histidine-kinase-PmrB	unknown	unknown	gnl\|CDD\|236751
NZ_CP008827.1\|WP_004152853.1\|1688739_1689462_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP008827.1\|WP_004151696.1\|1672988_1674272_-\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_CP008827.1\|WP_002895575.1\|1683099_1683576_-\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
NZ_CP008827.1\|WP_002895420.1\|1679313_1680840_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
NZ_CP008827.1\|WP_002895648.1\|1688075_1688798_+\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP008827.1\|WP_002895284.1\|1671369_1672293_-\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|225813
NZ_CP008827.1\|WP_002895580.1\|1685149_1686190_+\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
NZ_CP008827.1\|WP_004151698.1\|1675742_1676699_+\|formimidoylglutamase	unknown	unknown	gnl\|CDD\|234974
NZ_CP008827.1\|WP_002895283.1\|1670846_1671353_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP008827.1\|WP_004153329.1\|1674426_1675746_+\|imidazolonepropionase	gnl\|CDD\|236478	PRK09356, PRK09356, imidazolonepropionase; Validated.	0
NZ_CP008827.1\|WP_004151700.1\|1686186_1687344_+\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP008827.1\|WP_004152853.1\|1688739_1689462_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	3.17026e-74
NZ_CP008827.1\|WP_004147672.1\|1680938_1682321_+\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP008827.1\|WP_014342949.1\|1678378_1679317_+\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
NZ_CP008827.1\|WP_002895358.1\|1676760_1677486_+\|histidine-utilization-repressor	gnl\|CDD\|184961	PRK14999, PRK14999, histidine utilization repressor; Provisional.	3.37417e-172
NZ_CP008827.1\|WP_004142100.1\|1687327_1688083_+\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.7976e-160
NZ_CP008827.1\|WP_002895658.1\|1692442_1693540_-\|two-component-system-sensor-histidine-kinase-PmrB	gnl\|CDD\|236751	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB.	0
NZ_CP008827.1\|WP_002895655.1\|1690172_1692194_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP008827.1\|WP_004151696.1\|1672988_1674272_-\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_CP008827.1\|WP_002895575.1\|1683099_1683576_-\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	7.58373e-117
NZ_CP008827.1\|WP_002895420.1\|1679313_1680840_+\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
NZ_CP008827.1\|WP_002895648.1\|1688075_1688798_+\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	4.52132e-105
NZ_CP008827.1\|WP_004151698.1\|1675742_1676699_+\|formimidoylglutamase	gnl\|CDD\|234974	PRK01722, PRK01722, formimidoylglutamase; Provisional.	8.10638e-178
NZ_CP008827.1\|WP_002895284.1\|1671369_1672293_-\|acyltransferase-family-protein	gnl\|CDD\|225813	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only].	6.63632e-09
NZ_CP008827.1\|WP_002895578.1\|1683646_1684936_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_CP008827.1\|WP_002895580.1\|1685149_1686190_+\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0

>NZ_CP008827.1|WP_004147672.1|1680938_1682321_+|amino-acid-permease
MQQQHKPHLLRGLNARHIRFIALGSAIGTGLFYGSASAIKAAGPAVLLAYLIGGAAVFIVMRALGEMAVRNPVSGSFGSYARQYLGPLAGFITGWTYTFEMVIVALADVTAFGIYMGLWYPDVPRWIWILSIIFFIGAMNLCNVRVFGEMEFWLSLVKVVAIIAMMLAGAGIIFFGFGHSFPATGLENLWSHGGFAPNGWQGVIASLGIVMFAFGGVEIIGVTAAEAKDPKKVIPQAINTIPLRIILFYVCTLAVLMAIFPWNSFGEQGSPFVLIFDGLGIPAAATILNIIVISASISAINSDIFGAGRMMYGMSKEGLAPKSFQRIASNGVPWMTVVVMGGALLAAVVLNYLIPEQVFVLIASLAAFATVWVWLMILLSHFAMRRGLSAEERSQIAFPIPFWPVAPLLTLLFMGLVIAVLGMFAETRMALIAGLVWLGLLTVVWYARVRKTALQVATEQ
>NZ_CP008827.1|WP_002895420.1|1679313_1680840_+|histidine-ammonia-lyase
MKSLTLIPGQLSLSQLRDVYSHPVNITLDSGAFAAIDESVACVNAILAEGRTAYGINTGFGLLAQTRISTEDLENLQRSLVLSHAAGVGEPLDDDLTRLIMVLKINSLSRGFSGIRLSVIQALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLLGEGKARVRGGEWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDSAISQSHHNCSKVQDPYSLRCQPQVMGACLTQIRQAAEVLLAEANAVSDNPLVFAAENDVISGGNFHAEPVAMAADNIALAIAEIGSLSERRIALMMDSHMSQLPPFLVKNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSMAPAAGRRLWAMAENTRGVLAVEWLAAAQGLDMREGLTTSPLLEEARHLLRERVPHYTQDRYFAPDIDNAIALLAARHLTRLLPAVLH
>NZ_CP008827.1|WP_014342949.1|1678378_1679317_+|urocanate-hydratase
MKRGVRPDMVTDQTSAHDPLHGYLPKGWSWEEYQQKAESDPQGTILAAKRSMADHVQAMLAFHEMGVPTFDYGNNIRQMAQEVGVSNAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIIKDDQHLHHWLDMARERISFQGLPARICWVGLEWRQKLGLAFNEMVRSGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAARIARVLHNDPATGVMRHADAGYEIAIECAAEQGLNLPMVAATQGNAK
>NZ_CP008827.1|WP_002895358.1|1676760_1677486_+|histidine-utilization-repressor
MFAQQPRSAPAPFYEKVKQAISEKIHSGVWRPHDRIPSEAELVAQFGFSRMTINRALRELTDEGLLVRLQGVGTFVAEPKGQSALFEVRSIAAEIVARHHQHRCEVLLLEETRADHIQATALSVPEGTRIFHSLMVHYENEVPVQIEDRCVNAAVVPDYLHQDYTATTPHDYLSLIAPLTEGEHIVEAVQATAEECALLHIHAHDPCLLIRRRTWSTTHIVSHARLLFPGSRYRLQGRFGS
>NZ_CP008827.1|WP_004151698.1|1675742_1676699_+|formimidoylglutamase
MMLWQATPASLWQGRDDSAEAPNALRLFQTIVRAERFAPQEMPGDIALLGFACDEGVRRNKGRTGAADGPATLRRALANMASHQGHDRCVDMGTISVDGEQLEAAHQALREAVADCQRVGKRTLVLGGGHETAFGHGAGVLDAFPGEKVGIINLDAHLDLRFADCASSGTPFRQLALECDAQQRGFHYTCIGVSRAANTQALWDEAARRQVAIVEDLEVLTAFETRVLPELERNIAQFDRLYLTIDLDVLPAREMPAVSAPAALGVPLATLLRIVEPLCRNGKLQAVDLVEFNPLFDIDGQGARAAARLAWQIAHWWR
>NZ_CP008827.1|WP_004153329.1|1674426_1675746_+|imidazolonepropionase
MVFSHKKITFPCAIVDFTGVMKINVYTTHDKLSAMTEATSELVIWRNGRLATLNPDHAQPYGLLERHALLVRDGRIAAIVAEDDVPSGRSIDLEGRLVTPGLIDCHTHLVFGGSRAQEWEQRLNGVSYQTISASGGGINSTVRATRDSSEAELLALAQPRLERLLREGVTTLEIKSGYGLDLPNERKMLRVARQLADHNGVELSATLLSAHATPPEYQGDADGYITLVCETILPTLWQEGLFESVDVFCENVGFSPQQTERVFQAAQALGIPVKGHVEQLSSLGGAQLVSRYHGLSADHIEYLTEEGVAAMRESGTVAALLPGAFYFLNETRKPPVELLRKYQVPMAVATDFNPGTSPFASLHLAMNMACVKFGLTPEEAWAGVTRHAARALGRQASHGQLAPGFVANFAIWDAEHPVEMVYEPGRSPLWHRVVQGELQ
>NZ_CP008827.1|WP_004151696.1|1672988_1674272_-|putative-acyl-CoA-thioester-hydrolase
MNTYSVSRLALALAFGVTLSACSSTPADQQPSTQTAPGTTARPILNAEEAKNFTPAAYFQSLAPNAAAWTPSAISLPAQPDFIVGPAGTQGVTHTTIQAAVDAAIARHSNRRLYIAIMPGEYPGTVYVPAAPGALTLYGTGDKPIDVKISEAIDSEMDRNTWRRLVNPGGKYMPGKPAWYMFDSCQSKSAATIGVMCSAVFWSQNNGLQLQNLTIANNLGDSVDAGTHQAVALRSDGDQVQINKVNILGRQNTFFVTNSGVQNRLQDNRQTRTLVTNSYIEGDVDIVSGRGAVVFDNTDFRVVNSRTQKEAYVFAPATLKSVTYGFLATNSRFTASGDNVAQLGRALDVDGNSNGQVVIRDSAINEGFNIAQPWAAAVGSGRPFSGNTGSADDKGNLQRNLNDNGFNRMWEYNNRGVGSTVVAEPKQ
>NZ_CP008827.1|WP_002895284.1|1671369_1672293_-|acyltransferase-family-protein
MTAVTFFTIYNTWDRFDYDYHWILGLLTFISTIATPLFFVVAGYLDAQTRHDANWQIGKIKSVVIVFLFWVTVYYVWEPYQRGYLIQPWFIFALIVIYTFHPLIAWLSQRRGLFFAVLLTLLCCSYGYDLLSVIYPDRHLFSLPPQYRLWTWLLFYLTGQLFNDPKVAEWIRNPQVIKGSIIALPFVYLFTWFYERHFFFALFKADRNAFILTGSQIYILIVLLVIAANAVQFKKNREWKEAVLATVSKAMTGVYILHYSVFHLLVMLIPVHSLATKLGVIALTFVLSVLISLAALSSTLLRKVITL
>NZ_CP008827.1|WP_002895283.1|1670846_1671353_+|hypothetical-protein
MRGKSVMLLAGLASLAQANELNLYSVNTGSYVYHLTNNHGQYTENFENHFFSVERKFSADSKYSLLLGTMNNSFNDRCLALGVRRDWYHSGSGWTFKGVYGYTGEFFFDAFEHCGDHGSYKDFKDATGIGFSPYIYHAIQYNFTDYFAVESGIIIPSVFVISIQWSFR
>NZ_CP008827.1|WP_004229842.1|1670495_1670642_+|hypothetical-protein
MAGEMHEIAPTREGVNSNAVVDRWLSSASDSEHSGKYDEALSAFCTVR
>NZ_CP008827.1|WP_002895575.1|1683099_1683576_-|kinase-inhibitor
MKLISHDLQDGGKLPNRHVFNGMGYDGDNISPHLMWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVANLPADTRVLPQGAGSGQAELPEEAVQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVEKIEVDAEASGAMVGFNVHFHSLASASITALFS
>NZ_CP008827.1|WP_002895578.1|1683646_1684936_-|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTLDDLAFDRRHIWHPYTSMTSPLPVYPVVSAHGCELSLAGGEQLVDGMSSWWAAIHGYNHPRLNAALKGQIDQMSHVMFGGITHPPAVALCRQLVAMTPASLECVFLADSGSVAVEVAMKMALQYWQAKGEPRRRFLTFRNGYHGDTFGAMSVCDPQNSMHSLWQGYLPDNLFAPAPQSRFDGEWDEMDMVPFARLMAAHRHEIAAVILEPIVQGAGGMRMYHPEWLKRVRKMCDREGILLIADEIATGFGRTGKLFACEHAGITADILCLGKALTGGTMTLSAAITTRTVAETISNGEAGCFMHGPTFMGNPLACAVAGESLRLLESGEWQPQVTAIEAQLQAELAPARGSALVADVRVLGAIGVVETRRPVNMAALQRFFVEQGVWIRPFGRLIYLMPPYIITPEQLTRLTRAVNQAVQDETFFSE
>NZ_CP008827.1|WP_002895580.1|1685149_1686190_+|biotin-synthase-BioB
MAHQPRWTMSQVTELFNKPLIDLLFEAQQIHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSARYKTGLEAERLMEVEQVLESARQAKNAGSTRFCMGAAWKNPNDRDMPYLEQMVKGVKALGLESCMTLGTLTDSQAQRLAEAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKVRDAGIKVCSGGIVGLGESVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAIARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGINPQQTAVLEGDNEQQQRLEQALLTPDTEEYYNAAAL
>NZ_CP008827.1|WP_004151700.1|1686186_1687344_+|8-amino-7-oxononanoate-synthase
MSWQQRIDRALDERRAAEAFRRRLPVTHGAGRWLEREGERWLNFSSNDYLGLSQHPAIIAAWQQGATRYGVGAGGSGHVSGYSEAHRALEEALVDWLGYPRALLFISGFAANQALIAALVEKDDRIVADRLSHASLLEAASLSPAQLRRFTHNDPQQLAQLLAKPLAGEQLAVTEGIFSMDGDSAPLAAIHAATQAAGAVLLVDDAHGVGVVGDEGRGSCAAQAVRPELLVVTFGKAFGVSGAAVLCDEAMADYLLQFARHLIYSTAMPPAQAVALSAALGIIRSDEGRQRRDILAARIRQFREGMGKVSLGLTDSVSAIQPLIVGDNARALNLACRLRDAGCWATAIRPPTVPVGSARLRLTLTAAHHAEDINRLLEVLHGHSE
>NZ_CP008827.1|WP_004142100.1|1687327_1688083_+|malonyl-ACP-O-methyltransferase-BioC
MATVNKQAVAAAFGRAASGYTQHDELQRRCADLLLRQLARRDFAQVLDAGCGPGSMSRYWREAGSVVTALDLSAGMLAQAQRNDAAQHYLLGDIEALPLPDACVDLAWSNLAVQWCDDLRAAIGELYRVARPGGRVAFSTLLADSLPELNQAWQAIDDRPHANRFLSEAAVRAALSGLRATGEVHQISLPFADALSAMRSLKGIGATHLHQGRTAAPLGRGKLRELQLAWPQRQGICPLTYSLFTGVIERD
>NZ_CP008827.1|WP_002895648.1|1688075_1688798_+|ATP-dependent-dethiobiotin-synthetase-BioD
MTKRFFVTGTDTEVGKTIASSALLQAANLLGFHTAGYKPVASGSELTGDGLRNEDALALQRHSRVALRYDQVNPYTFAEPTSPHIISADEGRPIAAARLSSGLRELEGLADWVLVEGAGGWFTPLSDSLTFADWAQAEQLPVILVVGVKLGCINHAMLTAQAVRQAGLPLAGWIANDVQPPGKRHAEYLATLKNRLAAPFLGEIPWLADIAQRDDLGQYLDLRALDPALSTAPAAAHPAP
>NZ_CP008827.1|WP_004152853.1|1688739_1689462_-|ATP-binding-cassette-domain-containing-protein
MLNLQAVNHFYGNQHSLWNVDLVLRPGECIGVLGREGMGKTTLVNCIAGHLPVASGRMTWHDIGAPPQDLTPLSAQSRSAIGIGYVPQDKRIFSQLSVEENLHIALAAGKPGANASGGEIYEHFPELYALRQRKGASLSDDDQYQLALARALIVQPRLLILDEPSRGRGPRCLQKLADLLLRLNRDIGLTVLLAEQHLPFIRRVADRFCVLHRGRNVAEGDIMALDEPLLAQWITPDPAP
>NZ_CP008827.1|WP_002895652.1|1689548_1689761_-|hypothetical-protein
MDNCPQPKTTAARRLSPFAVNRVAKNFYRTIFDNYPLKAARFLLLFAPPFSVGHRKSAAPALTRPDGIGV
>NZ_CP008827.1|WP_002895655.1|1690172_1692194_+|excinuclease-ABC-subunit-B
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVEGTVPRYTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKETLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLGQGLAKTKAKGRGKAKAVEPAGLSAVDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>NZ_CP008827.1|WP_002895658.1|1692442_1693540_-|two-component-system-sensor-histidine-kinase-PmrB
MALFATETWTMRHRLLLTIGAILVVCQLISVFWLWHESKEQIQLLVASAIEGHNNQKHVEHEVREAVASLLVPSLLIVGLALYISMLAVRKITRPLSRLQSELENRTPDNLTPIVLSESVPEVTAVTTALNQLVSRLNLTLDRERLFTADVAHELRTPLAGLRLHLELLAKVHGMGVDPLIQRLDQMTTSISQLLQLARVGQSFSAGSYQQVLLLDDVVKPLQDELEAMLAQRQQRLLLTDIENEAVVSGDATLIGVILRNLVENAHRYSPEGSTIRVSVKAGLMPVMAVEDEGPGIDEAKSGELSKAFVRMDSRYGGIGLGLSIVTRIAQLHDAQFFLHNRQPGPGVRAWVLFPQRGGQNVSTH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
NZ_CP008827_2	2.1\|1297115\|36\|NZ_CP008827\|CRISPRCasFinder	1297115-1297150	36	MK448233	Klebsiella phage ST11-VIM1phi8.1, complete genome	8447-8482	1.0
NZ_CP008827_2	2.1\|1297115\|36\|NZ_CP008827\|CRISPRCasFinder	1297115-1297150	36	MK448235	Klebsiella phage ST512-KPC3phi13.1, complete genome	8447-8482	1.0
NZ_CP008827_2	2.1\|1297115\|36\|NZ_CP008827\|CRISPRCasFinder	1297115-1297150	36	MK448231	Klebsiella phage ST101-KPC2phi6.1, complete genome	11383-11418	1.0

1. spacer 2.1|1297115|36|NZ_CP008827|CRISPRCasFinder matches to MK448233 (Klebsiella phage ST11-VIM1phi8.1, complete genome) position: , mismatch: 0, identity: 1.0

acgcaaacccagtaaccacgctgcgtaccggcgagg	CRISPR spacer
acgcaaacccagtaaccacgctgcgtaccggcgagg	Protospacer
************************************

2. spacer 2.1|1297115|36|NZ_CP008827|CRISPRCasFinder matches to MK448235 (Klebsiella phage ST512-KPC3phi13.1, complete genome) position: , mismatch: 0, identity: 1.0

acgcaaacccagtaaccacgctgcgtaccggcgagg	CRISPR spacer
acgcaaacccagtaaccacgctgcgtaccggcgagg	Protospacer
************************************

3. spacer 2.1|1297115|36|NZ_CP008827|CRISPRCasFinder matches to MK448231 (Klebsiella phage ST101-KPC2phi6.1, complete genome) position: , mismatch: 0, identity: 1.0

acgcaaacccagtaaccacgctgcgtaccggcgagg	CRISPR spacer
acgcaaacccagtaaccacgctgcgtaccggcgagg	Protospacer
************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

590779 : 596604

Enterobacteria_phage(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152202.1\|590779_591346_-	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
WP_004152203.1\|591363_591609_-	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
WP_004152204.1\|591605_592343_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	1.1e-70	59.4
WP_000556592.1\|592903_593170_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.0e-30	71.6
WP_072093163.1\|593172_593715_+	ash family protein	Q7M2A7	Enterobacteria_phage	1.1e-30	69.4
WP_004152205.1\|593711_593939_+	hypothetical protein	NA	NA	NA	NA
WP_004152206.1\|593935_594256_+	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_004152207.1\|594270_596604_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	83.9

DBSCAN-SWA_2

1064850 : 1076504

Enterobacteria_phage(70.0%)

integrase

attL 1052984:1052998|attR 1076041:1076055

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1052984:1052998	attL	NA	NA	NA	NA
WP_002889890.1\|1064850_1067184_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2
WP_002889897.1\|1067195_1067516_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_004219964.1\|1067512_1067692_-	hypothetical protein	NA	NA	NA	NA
WP_072028197.1\|1067736_1068288_-	ash family protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
WP_002889915.1\|1068290_1068557_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
WP_004903606.1\|1068661_1068799_+	hypothetical protein	NA	NA	NA	NA
WP_002889917.1\|1069098_1069836_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	9.0e-73	60.7
WP_002889919.1\|1069832_1070078_+	hypothetical protein	Q7M294	Enterobacteria_phage	1.9e-19	58.0
WP_002889930.1\|1070095_1070662_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.5e-59	64.3
WP_020802988.1\|1070734_1070884_+	hypothetical protein	NA	NA	NA	NA
WP_004152979.1\|1071230_1071656_-	hypothetical protein	NA	NA	NA	NA
WP_004152029.1\|1071655_1072606_-	AAA family ATPase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
WP_002889938.1\|1072593_1073784_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	6.4e-145	62.7
WP_002889940.1\|1074136_1075390_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
WP_004144574.1\|1075400_1076504_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
1076041:1076055	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1286059 : 1331334

Escherichia_phage(26.42%)

lysis,tRNA,integrase,head

attL 1288942:1288988|attR 1338076:1338122

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004143010.1\|1286059_1287445_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4
WP_004143016.1\|1287490_1287703_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_004143017.1\|1287704_1288571_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
1288942:1288988	attL	NA	NA	NA	NA
WP_004151318.1\|1289001_1290165_-\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	3.3e-202	87.3
WP_004151317.1\|1290041_1290377_-	excisionase family DNA-binding protein	NA	NA	NA	NA
WP_004151316.1\|1290378_1290594_-	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	4.0e-13	52.9
WP_004151314.1\|1290595_1290814_-	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.2e-09	47.2
WP_004151312.1\|1290810_1291578_-	hypothetical protein	D5LH17	Escherichia_phage	1.7e-66	53.4
WP_004151310.1\|1291574_1292231_-	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-113	87.5
WP_004151308.1\|1292227_1292386_-	DUF1317 family protein	A0A0N7CHV0	Escherichia_phage	3.0e-10	60.8
WP_004151306.1\|1292382_1293063_-	YqaJ viral recombinase family protein	A0A0M3ULE0	Salmonella_phage	7.9e-124	93.4
WP_004151305.1\|1293059_1293905_-	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	6.9e-69	59.2
WP_004151304.1\|1293920_1294205_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	8.0e-30	62.8
WP_004151303.1\|1294293_1294488_-	hypothetical protein	NA	NA	NA	NA
WP_004151302.1\|1294480_1294591_-	hypothetical protein	NA	NA	NA	NA
WP_004151301.1\|1294587_1294803_-	hypothetical protein	B5WZV1	Pseudomonas_phage	1.6e-09	48.6
WP_004151300.1\|1295153_1295843_-	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	4.3e-61	52.2
WP_004151299.1\|1295970_1296204_+	helix-turn-helix domain-containing protein	G8C7U2	Escherichia_phage	4.3e-13	50.7
WP_001548453.1\|1296244_1296466_+	hypothetical protein	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
WP_004151298.1\|1296551_1296698_+	hypothetical protein	NA	NA	NA	NA
WP_004230546.1\|1296738_1297590_+	hypothetical protein	F1C5C3	Cronobacter_phage	5.3e-85	56.3
WP_004230547.1\|1297594_1299010_+	AAA family ATPase	Q9MCT4	Escherichia_phage	1.8e-183	67.1
WP_004151295.1\|1299009_1299303_+	protein ren	O48423	Enterobacteria_phage	3.3e-26	65.6
WP_004151294.1\|1299299_1299806_+	hypothetical protein	A0A0A6Z565	Enterobacter_phage	3.0e-27	59.6
WP_004151293.1\|1299912_1300755_+	translation repressor RelE	A0A2H4FRZ0	Salmonella_phage	1.8e-29	60.8
WP_004151291.1\|1300927_1301575_+	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	4.5e-12	32.6
WP_004151288.1\|1302075_1302531_+	hypothetical protein	K7P7B8	Enterobacteria_phage	8.0e-56	69.5
WP_004151287.1\|1302530_1302701_+	NinE family protein	G8C7V4	Escherichia_phage	1.3e-14	73.2
WP_004151286.1\|1302693_1303329_+	protein ninG	M9NYX8	Enterobacteria_phage	2.7e-81	77.9
WP_004151285.1\|1303325_1303463_+	YlcG family protein	NA	NA	NA	NA
WP_004151284.1\|1303455_1303986_+	HNH endonuclease	A0A193GYW9	Enterobacter_phage	5.2e-30	43.1
WP_004151283.1\|1303982_1304672_+	antitermination protein	I6PDF8	Cronobacter_phage	1.4e-56	54.5
WP_004151282.1\|1305581_1305830_+	hypothetical protein	NA	NA	NA	NA
WP_004151281.1\|1305832_1306363_+	lysozyme	G9L6J6	Escherichia_phage	6.0e-79	78.5
WP_004151280.1\|1306359_1306824_+\|lysis	lysis protein	Q76H63	Enterobacteria_phage	2.4e-55	73.2
WP_004151279.1\|1306929_1307259_-	hypothetical protein	NA	NA	NA	NA
WP_004151277.1\|1307629_1308232_+	hypothetical protein	G8C7P2	Escherichia_phage	5.4e-76	80.9
WP_004151276.1\|1308231_1309704_+	hypothetical protein	A0A1W6JNY3	Morganella_phage	1.3e-248	82.5
WP_004151275.1\|1309716_1311138_+	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	9.6e-148	57.1
WP_004151274.1\|1311112_1312117_+\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	9.0e-116	69.7
WP_004151273.1\|1312158_1312635_+	hypothetical protein	NA	NA	NA	NA
WP_004151272.1\|1312707_1314093_+	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	2.3e-154	60.0
WP_004151271.1\|1314096_1314525_+	hypothetical protein	F1C5E0	Cronobacter_phage	1.6e-42	60.8
WP_004151270.1\|1314536_1315631_+	hypothetical protein	F1C5E1	Cronobacter_phage	1.7e-123	62.8
WP_004151269.1\|1315641_1315881_+	hypothetical protein	NA	NA	NA	NA
WP_004151268.1\|1315883_1316264_+	hypothetical protein	F1C5E2	Cronobacter_phage	5.3e-29	55.3
WP_004151267.1\|1316263_1316437_+	hypothetical protein	I6R0P9	Salmonella_phage	1.4e-13	56.1
WP_004151266.1\|1316436_1316799_+	hypothetical protein	A0A173GCE0	Salmonella_phage	1.8e-18	45.0
WP_004151265.1\|1316801_1317227_+	hypothetical protein	R9TPP7	Aeromonas_phage	5.1e-28	47.9
WP_004151264.1\|1317223_1317616_+	hypothetical protein	G0ZNE4	Cronobacter_phage	5.1e-35	52.7
WP_004151263.1\|1317684_1318437_+	Ig domain-containing protein	G0ZNE6	Cronobacter_phage	5.8e-43	42.1
WP_004151262.1\|1318489_1319167_+	hypothetical protein	F1C5E8	Cronobacter_phage	4.8e-73	57.9
WP_004151261.1\|1319342_1320098_+	DNA-binding protein	K7PGT4	Enterobacteria_phage	2.4e-60	51.0
WP_004151260.1\|1320100_1320355_+	hypothetical protein	K7PM89	Enterobacteria_phage	6.7e-20	73.0
WP_004151259.1\|1320648_1321119_+	hypothetical protein	NA	NA	NA	NA
WP_004151258.1\|1321135_1321495_-	Arc family DNA-binding protein	A0A0P0ZBD1	Stx2-converting_phage	3.8e-16	47.5
WP_004151257.1\|1321594_1321765_+	Arc family DNA-binding protein	I6R9A8	Salmonella_phage	6.1e-17	87.0
WP_004151256.1\|1321754_1322468_+	hypothetical protein	H6WRU8	Salmonella_phage	3.9e-49	50.2
WP_004151255.1\|1322533_1323319_+	phage repressor protein	A0A2L1IV39	Escherichia_phage	1.9e-84	59.7
WP_004151254.1\|1323446_1323950_+	hypothetical protein	NA	NA	NA	NA
WP_004151253.1\|1324042_1327489_+	tape measure protein	Q5G8W8	Enterobacteria_phage	1.4e-163	48.6
WP_004151252.1\|1327531_1328008_+	hypothetical protein	A0A2P1MXB5	Escherichia_phage	3.0e-37	49.7
WP_004199076.1\|1328007_1328478_+	hypothetical protein	R9TPR6	Aeromonas_phage	2.5e-28	41.0
WP_004151250.1\|1328474_1328870_+	hypothetical protein	F1C5F2	Cronobacter_phage	8.0e-36	54.0
WP_004151249.1\|1328856_1331334_+	MoaD/ThiS family protein	F1C5A7	Cronobacter_phage	2.7e-198	45.6
1338076:1338122	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1776443 : 1813779

Salmonella_phage(85.0%)

capsid,terminase,plate,tail,integrase,portal,head,lysis

attL 1776351:1776369|attR 1813851:1813869

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1776351:1776369	attL	NA	NA	NA	NA
WP_014342959.1\|1776443_1777424_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.4e-97	57.2
WP_004178082.1\|1777911_1779399_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004150866.1\|1779497_1780442_-	hypothetical protein	NA	NA	NA	NA
WP_004152885.1\|1780453_1781332_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.7e-30	39.9
WP_000188448.1\|1781477_1781699_+	hypothetical protein	NA	NA	NA	NA
WP_000460893.1\|1781731_1782241_+	phage regulatory CII family protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
WP_000956179.1\|1782248_1782449_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.6e-32	97.0
WP_000963473.1\|1782412_1782754_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
WP_004150864.1\|1782821_1783055_+	DUF2732 family protein	E5G6L6	Salmonella_phage	4.1e-32	96.1
WP_000752622.1\|1783054_1783282_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	6.0e-36	98.7
WP_004150863.1\|1783278_1784136_+	DNA adenine methylase	E5G6L8	Salmonella_phage	2.0e-156	95.4
WP_004150862.1\|1784132_1786547_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.5
WP_001154434.1\|1786700_1786889_+	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_001217575.1\|1786899_1787133_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_000700647.1\|1787247_1787925_+	hypothetical protein	NA	NA	NA	NA
WP_004199124.1\|1788200_1789943_+	AIPR family protein	NA	NA	NA	NA
WP_002895959.1\|1790004_1791030_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
WP_004150858.1\|1791029_1792796_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.0
WP_002895967.1\|1792938_1793772_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
WP_002895972.1\|1793788_1794847_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
WP_000059191.1\|1794850_1795501_+\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	8.7e-112	96.3
WP_002896151.1\|1795596_1796061_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
WP_002896155.1\|1796060_1796264_+\|tail	tail protein X	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
WP_002896158.1\|1796267_1796483_+	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
WP_002896161.1\|1796463_1796973_+	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
WP_002896163.1\|1796977_1797361_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
WP_002896168.1\|1797357_1797786_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
WP_002896170.1\|1797772_1797919_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	6.0e-13	76.1
WP_002896172.1\|1797881_1798313_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
WP_002896175.1\|1798305_1798752_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
WP_004199112.1\|1798748_1799258_-	hypothetical protein	NA	NA	NA	NA
WP_004226282.1\|1799256_1799421_+	hypothetical protein	NA	NA	NA	NA
WP_002896177.1\|1799535_1800108_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
WP_002896179.1\|1800104_1800467_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	5.8e-49	84.7
WP_002896182.1\|1800453_1801362_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
WP_004150856.1\|1801354_1801954_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
WP_004152882.1\|1801955_1804907_+	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	1.2e-06	50.9
WP_002896186.1\|1804910_1805642_+	hypothetical protein	NA	NA	NA	NA
WP_004232615.1\|1805680_1805842_+	hypothetical protein	NA	NA	NA	NA
WP_002896191.1\|1805871_1806948_+\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
WP_002896193.1\|1807086_1808259_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
WP_002896201.1\|1808268_1808784_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
WP_002896204.1\|1808836_1809136_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
WP_002896220.1\|1809150_1809270_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_014342962.1\|1809496_1811890_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	1.1e-106	44.0
WP_002896224.1\|1811886_1812372_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
WP_002896225.1\|1812368_1813469_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
WP_000972391.1\|1813560_1813779_+	transcriptional activator Ogr/delta	Q53ZE7	Salmonella_virus	7.5e-20	69.0
1813851:1813869	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1848195 : 1857659

Dickeya_phage(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002896440.1\|1848195_1849311_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_004150848.1\|1849307_1851248_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896516.1\|1851324_1851546_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_002896520.1\|1851871_1852189_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896522.1\|1852219_1854499_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_001040187.1\|1854619_1854838_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_004141853.1\|1855191_1855911_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_004150847.1\|1855937_1857659_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3

DBSCAN-SWA_6

2223730 : 2278526

Klebsiella_phage(23.08%)

protease,integrase,transposase

attL 2264923:2264982|attR 2270834:2271491

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002901758.1\|2223730_2224777_+\|protease	protease SohB	NA	NA	NA	NA
WP_002901761.1\|2224824_2225076_-	YciN family protein	NA	NA	NA	NA
WP_002901763.1\|2225482_2228080_+	type I DNA topoisomerase	A0A2K9L5F8	Tupanvirus	2.9e-89	35.6
WP_002901772.1\|2228425_2229400_+	HTH-type transcriptional regulator CysB	NA	NA	NA	NA
WP_002901776.1\|2229645_2229813_+	YmiA family putative membrane protein	NA	NA	NA	NA
WP_002901777.1\|2230201_2232874_+	aconitate hydratase AcnA	NA	NA	NA	NA
WP_002901778.1\|2232920_2233523_-	GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.2e-43	49.5
WP_002901779.1\|2233686_2234454_+	phosphatidylglycerophosphatase B	NA	NA	NA	NA
WP_002901780.1\|2234589_2234898_+	LapA family protein	NA	NA	NA	NA
WP_002901781.1\|2234904_2236074_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
WP_004151907.1\|2236265_2237003_+	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
WP_002901782.1\|2237002_2237329_+	stress response translation initiation inhibitor YciH	NA	NA	NA	NA
WP_002901783.1\|2237460_2237679_-	osmotically-inducible lipoprotein OsmB	NA	NA	NA	NA
WP_004225185.1\|2237763_2237883_+	hypothetical protein	NA	NA	NA	NA
WP_002901785.1\|2237954_2238704_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_004140283.1\|2238775_2239033_-	hypothetical protein	NA	NA	NA	NA
WP_002901787.1\|2239113_2241048_-	exoribonuclease II	A0A2H4UVB7	Bodo_saltans_virus	7.0e-08	24.6
WP_004151905.1\|2241129_2242287_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_004151904.1\|2242477_2243266_-	enoyl-ACP reductase FabI	NA	NA	NA	NA
WP_004152967.1\|2243464_2244007_-	HutD family protein	NA	NA	NA	NA
WP_004151902.1\|2244254_2245634_+	cytosine permease	NA	NA	NA	NA
WP_004140269.1\|2245678_2246488_-	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9
WP_004140266.1\|2246489_2247482_-	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
WP_004151901.1\|2247481_2248372_-	peptide ABC transporter permease SapC	NA	NA	NA	NA
WP_004151900.1\|2248518_2249736_+\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	8.6e-121	51.9
WP_004151899.1\|2249943_2250606_-	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-105	84.6
WP_004151898.1\|2250602_2251031_-	hypothetical protein	M9NYX4	Enterobacteria_phage	7.5e-64	80.3
WP_074401227.1\|2251027_2251534_-	YqaJ viral recombinase family protein	A0A0M3ULE0	Salmonella_phage	9.5e-82	93.5
WP_000019473.1\|2251559_2252540_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_004152648.1\|2252730_2253066_+	hypothetical protein	NA	NA	NA	NA
WP_004152649.1\|2253380_2253845_+	hypothetical protein	A0A286S298	Klebsiella_phage	6.7e-58	67.8
WP_004152650.1\|2254025_2254508_+	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	1.7e-80	94.4
WP_004152651.1\|2254517_2254898_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	1.8e-72	99.2
WP_004152652.1\|2254894_2257963_+	hypothetical protein	A0A286S259	Klebsiella_phage	0.0e+00	97.5
WP_022644627.1\|2258039_2260994_+	hypothetical protein	A0A286S1P0	Klebsiella_phage	4.2e-44	68.3
WP_004152700.1\|2260997_2261729_+	hypothetical protein	NA	NA	NA	NA
WP_004152702.1\|2261953_2262553_-	hypothetical protein	NA	NA	NA	NA
WP_004152703.1\|2262794_2264738_-	hypothetical protein	A0A286S1P0	Klebsiella_phage	1.1e-37	69.8
2264923:2264982	attL	NA	NA	NA	NA
WP_001067855.1\|2264986_2265691_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_004163135.1\|2265581_2266541_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.7e-47	40.5
WP_001261740.1\|2266686_2267478_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_000679427.1\|2267641_2267989_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|2267982_2268822_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_000376623.1\|2268949_2269450_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001389365.1\|2269956_2270721_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001067855.1\|2270897_2271602_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
2270834:2271491	attR	NA	NA	NA	NA
WP_004152776.1\|2272194_2272617_+	hypothetical protein	K7P834	Enterobacteria_phage	3.6e-26	45.3
WP_004178082.1\|2273511_2274999_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_002901812.1\|2275078_2275498_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.4e-35	57.5
WP_002901813.1\|2275499_2276765_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	9.6e-208	82.7
WP_071531199.1\|2276840_2277668_-	FRG domain-containing protein	A0A1S6KZX9	Salmonella_phage	8.4e-19	30.2
WP_002901815.1\|2277854_2278526_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	4.5e-79	59.6

DBSCAN-SWA_7

2311459 : 2354507

Klebsiella_phage(33.33%)

terminase,integrase,transposase

attL 2309540:2309554|attR 2318480:2318494

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2309540:2309554	attL	NA	NA	NA	NA
WP_004152144.1\|2311459_2312221_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5
WP_004152145.1\|2312437_2313970_+	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-21	30.0
WP_016197745.1\|2314168_2314717_-	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_004152147.1\|2314913_2316095_+\|integrase	site-specific integrase	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
WP_004152148.1\|2316075_2316318_-	hypothetical protein	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
WP_004198245.1\|2316277_2316424_-	hypothetical protein	A0A1B5FPC2	Escherichia_phage	2.9e-15	70.8
WP_014343018.1\|2316496_2316730_-	hypothetical protein	NA	NA	NA	NA
WP_004218013.1\|2316972_2317086_-	hypothetical protein	A0A286S2B6	Klebsiella_phage	4.6e-13	100.0
WP_004152151.1\|2317181_2317406_-	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
WP_004154298.1\|2317395_2318106_-	DNA-binding protein	A0A286S260	Klebsiella_phage	2.1e-111	88.3
WP_004152153.1\|2318111_2318630_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
2318480:2318494	attR	NA	NA	NA	NA
WP_004152154.1\|2318734_2319562_-	hypothetical protein	Q8W654	Enterobacteria_phage	5.5e-111	84.0
WP_004152155.1\|2319558_2319753_-	hypothetical protein	NA	NA	NA	NA
WP_004152156.1\|2319749_2320175_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
WP_004146412.1\|2320171_2320294_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	1.3e-16	100.0
WP_004152157.1\|2320361_2320616_-	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
WP_004218017.1\|2320608_2320770_-	hypothetical protein	A0A286S1Q6	Klebsiella_phage	1.5e-20	96.2
WP_004152159.1\|2321143_2321332_-	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
WP_004152160.1\|2321324_2321639_-	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
WP_004152161.1\|2321809_2322478_-	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
WP_004152162.1\|2322575_2322797_+	helix-turn-helix transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
WP_004198228.1\|2323373_2325032_+	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	96.0
WP_004218023.1\|2325018_2325996_+	DNA primase	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
WP_004198239.1\|2325992_2326469_+	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
WP_004152167.1\|2326465_2327248_+	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
WP_004152168.1\|2327314_2327470_+	hypothetical protein	NA	NA	NA	NA
WP_004218026.1\|2327507_2327636_-	hypothetical protein	NA	NA	NA	NA
WP_004146526.1\|2327653_2327902_+	hypothetical protein	NA	NA	NA	NA
WP_004152169.1\|2327904_2328435_+	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
WP_004153952.1\|2328431_2328821_+	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
WP_004152170.1\|2329055_2329376_+	hypothetical protein	NA	NA	NA	NA
WP_004218030.1\|2329741_2330230_+	hypothetical protein	NA	NA	NA	NA
WP_004152172.1\|2330180_2331581_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
WP_004152173.1\|2331818_2333270_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
WP_004152174.1\|2333325_2333874_+	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
WP_004199270.1\|2333925_2335128_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
WP_000528476.1\|2335131_2335626_+	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
WP_001132269.1\|2335637_2336579_+	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.7e-137	77.1
WP_000725700.1\|2336618_2336900_+	hypothetical protein	NA	NA	NA	NA
WP_000113538.1\|2336868_2337288_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
WP_000834982.1\|2337284_2337791_+	hypothetical protein	NA	NA	NA	NA
WP_001116156.1\|2337790_2338177_+	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
WP_004152176.1\|2338271_2338712_+	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
WP_004152177.1\|2338715_2339861_+	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
WP_004152178.1\|2339871_2340162_+	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	2.6e-23	85.5
WP_085955245.1\|2340102_2341295_-\|transposase	IS3-like element ISKpn18 family transposase	U5P429	Shigella_phage	3.5e-50	43.5
WP_004152564.1\|2341621_2342047_+	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
WP_004152565.1\|2342082_2342235_+	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
WP_004152566.1\|2342224_2344228_+	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
WP_004225238.1\|2344413_2344827_+	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	8.1e-31	55.9
WP_004217362.1\|2344902_2345130_+	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	4.6e-20	56.0
WP_004152569.1\|2345132_2346155_+	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
WP_004152570.1\|2346154_2346496_+	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
WP_004173705.1\|2346548_2346734_-	hypothetical protein	NA	NA	NA	NA
WP_004225248.1\|2346986_2347337_+	hypothetical protein	NA	NA	NA	NA
WP_004152572.1\|2347390_2348044_+	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
WP_004152573.1\|2348045_2348399_+	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
WP_004152574.1\|2348398_2349595_+	hypothetical protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
WP_004152575.1\|2349591_2350365_+	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
WP_004231600.1\|2350839_2351004_+	hypothetical protein	NA	NA	NA	NA
WP_004231602.1\|2351124_2351256_+	hypothetical protein	NA	NA	NA	NA
WP_004152577.1\|2351230_2351428_+	hypothetical protein	NA	NA	NA	NA
WP_014343022.1\|2351483_2354507_+	hypothetical protein	A0A286S1P0	Klebsiella_phage	1.6e-22	44.7

DBSCAN-SWA_8

2577790 : 2587204

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002210516.1\|2577790_2578411_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
WP_004151609.1\|2578403_2579669_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
WP_004151610.1\|2579680_2580583_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
WP_002210513.1\|2580843_2581605_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_004176269.1\|2581625_2582486_-	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_002904006.1\|2582783_2583044_+	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
WP_001620097.1\|2583130_2584219_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_004151612.1\|2584249_2585515_-	MFS transporter	NA	NA	NA	NA
WP_160463746.1\|2585569_2587204_-	DUF4981 domain-containing protein	L0N6M2	Herpes_simplex_virus	3.1e-182	55.8

DBSCAN-SWA_9

3244463 : 3287564

Microcystis_virus(37.5%)

tRNA,plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002910404.1\|3244463_3245720_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_002910405.1\|3245990_3246602_+	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_004217879.1\|3246601_3247450_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_002910407.1\|3247633_3248581_+	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	2.3e-44	37.5
WP_004152259.1\|3248705_3250385_+	C4-dicarboxylic acid transporter DauA	A0A2H4J153	uncultured_Caudovirales_phage	7.9e-24	23.4
WP_002910436.1\|3250385_3251432_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_002910437.1\|3251654_3251930_-	stress-induced protein YchH	NA	NA	NA	NA
WP_002910438.1\|3252202_3252787_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_002910443.1\|3252904_3253996_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_002910446.1\|3254078_3254288_-	DUF1869 domain-containing protein	NA	NA	NA	NA
WP_002910453.1\|3254489_3255404_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004152260.1\|3255535_3256951_-	membrane protein	NA	NA	NA	NA
WP_004152261.1\|3256970_3257414_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_002910493.1\|3257416_3257953_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004152910.1\|3257933_3258950_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_002910495.1\|3258979_3260743_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004152262.1\|3260876_3264287_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_004198077.1\|3264270_3265428_-	hypothetical protein	NA	NA	NA	NA
WP_002910497.1\|3265431_3265698_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_072093174.1\|3265995_3266181_-	hypothetical protein	NA	NA	NA	NA
WP_072093175.1\|3266441_3266576_-	hypothetical protein	NA	NA	NA	NA
WP_000019473.1\|3266801_3267782_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_004152632.1\|3268118_3269009_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	4.1e-11	29.8
WP_004217421.1\|3269184_3269958_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	1.2e-11	28.1
WP_038435084.1\|3270099_3270228_-	hypothetical protein	NA	NA	NA	NA
WP_004152633.1\|3270253_3271147_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	1.7e-12	27.3
WP_004217423.1\|3271168_3271285_-	hypothetical protein	NA	NA	NA	NA
WP_002910544.1\|3271330_3272224_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	6.7e-14	30.5
WP_004199323.1\|3272245_3272557_-	hypothetical protein	NA	NA	NA	NA
WP_004227470.1\|3272597_3273686_-	hypothetical protein	NA	NA	NA	NA
WP_002910551.1\|3274067_3274574_-	hypothetical protein	NA	NA	NA	NA
WP_004153085.1\|3274570_3274900_-	hypothetical protein	NA	NA	NA	NA
WP_004199326.1\|3274896_3275079_-	hypothetical protein	NA	NA	NA	NA
WP_022644641.1\|3275220_3276189_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	6.5e-180	96.3
WP_002910586.1\|3277794_3278304_-	hypothetical protein	NA	NA	NA	NA
WP_002910591.1\|3278540_3279047_-	hypothetical protein	NA	NA	NA	NA
WP_002910593.1\|3279043_3279553_-	hypothetical protein	NA	NA	NA	NA
WP_004152319.1\|3279553_3280909_-	hypothetical protein	NA	NA	NA	NA
WP_004152317.1\|3283872_3285570_-	OmpA family protein	NA	NA	NA	NA
WP_004152316.1\|3285573_3286227_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_002910645.1\|3286223_3287564_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_10

3545713 : 3553338

Escherichia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152482.1\|3545713_3546715_-	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.2e-30	28.6
WP_004152483.1\|3546908_3548075_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	4.1e-112	54.7
WP_004152484.1\|3548255_3548810_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.8e-52	58.2
WP_004152485.1\|3548824_3549715_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.8e-28	33.6
WP_004152486.1\|3549746_3550616_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	9.8e-111	67.0
WP_004152487.1\|3550642_3551707_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.4e-105	55.0
WP_004152488.1\|3551931_3553338_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7

DBSCAN-SWA_11

3589905 : 3596812

Bacillus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004151135.1\|3589905_3591384_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.1e-29	28.3
WP_002912634.1\|3591380_3592103_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	6.4e-31	33.2
WP_002912635.1\|3592421_3593783_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	2.5e-206	94.5
WP_004151134.1\|3594025_3594922_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_002912638.1\|3595164_3595938_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-25	36.3
WP_004175147.1\|3595948_3596812_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5

DBSCAN-SWA_12

3896594 : 3970246

Salmonella_phage(42.0%)

capsid,terminase,tail,integrase,transposase,protease,holin,tRNA

attL 3902236:3902253|attR 3969235:3969252

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152006.1\|3896594_3898598_-\|tRNA	tRNA(Met) cytidine acetyltransferase	NA	NA	NA	NA
WP_002913800.1\|3898607_3899483_-	neutral zinc metallopeptidase	NA	NA	NA	NA
WP_002913801.1\|3899602_3900316_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A127KMU1	Cyanophage	1.1e-38	35.7
WP_002913802.1\|3900531_3901566_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA
WP_002913803.1\|3901582_3902461_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
3902236:3902253	attL	NA	NA	NA	NA
WP_002913804.1\|3902614_3903181_+	glycine cleavage system transcriptional repressor	NA	NA	NA	NA
WP_002913805.1\|3903184_3903655_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
WP_002913806.1\|3903716_3904778_-	AI-2E family transporter	NA	NA	NA	NA
WP_004221267.1\|3904832_3904949_-	hypothetical protein	NA	NA	NA	NA
WP_002913807.1\|3905000_3906464_+\|protease	beta-barrel assembly-enhancing protease	NA	NA	NA	NA
WP_002913810.1\|3906473_3906833_+	arsenate reductase (glutaredoxin)	NA	NA	NA	NA
WP_002913812.1\|3906960_3907872_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	3.5e-74	58.8
WP_020947395.1\|3907868_3908570_-	DnaA inactivator Hda	NA	NA	NA	NA
WP_002913824.1\|3908668_3909955_-	uracil permease	Q9KX94	Enterobacteria_phage	1.9e-65	38.1
WP_002913827.1\|3910050_3910677_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_002913829.1\|3910894_3912328_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_002913833.1\|3912337_3913231_-	ROK family protein	NA	NA	NA	NA
WP_002913836.1\|3913494_3914532_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	8.2e-72	44.5
WP_004152007.1\|3914528_3915170_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	1.2e-28	41.1
WP_002913838.1\|3915350_3917411_+	polyphosphate kinase 1	NA	NA	NA	NA
WP_002913839.1\|3917414_3918947_+	exopolyphosphatase	NA	NA	NA	NA
WP_002913841.1\|3919000_3921229_-	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
WP_004174861.1\|3921599_3921773_+	DUF2633 family protein	G9L6F2	Escherichia_phage	1.4e-16	78.8
WP_004221278.1\|3921869_3922781_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002913847.1\|3922854_3924087_+	MFS transporter	NA	NA	NA	NA
WP_004162150.1\|3924380_3925559_+	anaerobic sulfatase maturase	NA	NA	NA	NA
WP_004152009.1\|3925542_3927411_+	sulfatase-like hydrolase/transferase	A0A2P0VMN7	Tetraselmis_virus	2.6e-07	22.6
WP_004152707.1\|3927630_3928113_-	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	3.0e-61	80.6
WP_004152706.1\|3928109_3928739_-	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	3.1e-90	76.4
WP_004146393.1\|3928728_3929034_-\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	2.7e-39	82.4
WP_004146394.1\|3929020_3929425_-	membrane protein	T1SA79	Salmonella_phage	9.3e-56	84.1
WP_004221284.1\|3929709_3932079_-\|tail	phage tail fibers	A0A2H5BN49	Klebsiella_phage	9.1e-268	79.5
WP_004152453.1\|3932617_3932875_+	DUF1902 domain-containing protein	A0A0M4R2Z9	Salmonella_phage	2.3e-12	54.1
WP_004152454.1\|3932878_3933076_+	type II toxin-antitoxin system HicA family toxin	A0A0M4RCZ9	Salmonella_phage	2.0e-19	69.8
WP_157833602.1\|3933184_3933373_+	hypothetical protein	NA	NA	NA	NA
WP_004152455.1\|3933456_3934152_+	hypothetical protein	A0A193GYJ9	Enterobacter_phage	4.4e-61	52.7
WP_004152456.1\|3934342_3934525_+	hypothetical protein	NA	NA	NA	NA
WP_004152457.1\|3934529_3934928_+	hypothetical protein	NA	NA	NA	NA
WP_004152458.1\|3935202_3935817_-	hypothetical protein	NA	NA	NA	NA
WP_004152459.1\|3935826_3939216_-	hypothetical protein	G9L6D4	Escherichia_phage	6.3e-121	42.0
WP_004152460.1\|3939215_3941960_-	hypothetical protein	A0A193GYI3	Enterobacter_phage	9.1e-94	39.2
WP_004152461.1\|3941972_3942470_-	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	5.7e-23	40.5
WP_004152462.1\|3942462_3942933_-	hypothetical protein	Q858G2	Salmonella_phage	7.3e-44	55.3
WP_004152463.1\|3942934_3945412_-	hypothetical protein	G9L6D0	Escherichia_phage	3.6e-267	56.5
WP_004153043.1\|3945411_3946023_-	hypothetical protein	T1SAQ2	Salmonella_phage	1.2e-46	48.8
WP_004152465.1\|3946071_3946350_-	hypothetical protein	T1SA01	Salmonella_phage	6.7e-21	58.9
WP_004152466.1\|3946342_3946735_-	hypothetical protein	T1SA71	Salmonella_phage	1.5e-55	89.9
WP_004152467.1\|3946744_3947752_-\|capsid	phage capsid protein	T1S9H9	Salmonella_phage	2.7e-181	92.5
WP_004152468.1\|3947764_3948163_-	peptidase	T1SAP9	Salmonella_phage	5.6e-37	59.5
WP_004152470.1\|3948444_3948750_-	hypothetical protein	Q2A090	Sodalis_phage	1.1e-16	51.3
WP_004152471.1\|3948746_3950426_-\|tail	tail protein	T1S9Z7	Salmonella_phage	3.4e-192	58.9
WP_004152472.1\|3950429_3950633_-	hypothetical protein	NA	NA	NA	NA
WP_004152473.1\|3951338_3951860_+	DUF2829 domain-containing protein	A0A1B0VMG3	Pseudomonas_phage	7.8e-47	55.2
WP_004164044.1\|3951903_3953379_-	hypothetical protein	Q858H3	Salmonella_phage	1.9e-279	92.9
WP_004152523.1\|3953375_3953960_-\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	2.4e-89	88.1
WP_004152524.1\|3954037_3954295_-	hypothetical protein	NA	NA	NA	NA
WP_004152525.1\|3954369_3954708_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	4.7e-45	80.0
WP_004152526.1\|3954707_3954947_-	hypothetical protein	G8C7S3	Escherichia_phage	4.6e-10	48.0
WP_004152527.1\|3954939_3955608_-	DUF551 domain-containing protein	Q6UAT8	Klebsiella_phage	1.5e-05	52.5
WP_004141386.1\|3955604_3955817_-	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	8.1e-11	45.5
WP_004152529.1\|3955987_3956731_-	hypothetical protein	A6N3G8	Burkholderia_virus	1.5e-19	59.5
WP_004152530.1\|3956727_3957153_-	hypothetical protein	NA	NA	NA	NA
WP_004152531.1\|3957149_3957341_-	hypothetical protein	NA	NA	NA	NA
WP_004152532.1\|3957324_3957735_-	hypothetical protein	A0A2P1MXC5	Escherichia_phage	3.1e-14	42.2
WP_004152534.1\|3957927_3958275_-	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	5.0e-50	82.6
WP_004152535.1\|3958394_3959180_-	replication protein	A0A193GYX1	Enterobacter_phage	8.2e-133	87.4
WP_004152536.1\|3959176_3959944_-	primosomal protein	A0A193GZ86	Enterobacter_phage	3.4e-139	91.0
WP_004152538.1\|3960301_3960535_-	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
WP_004152539.1\|3960689_3961271_+	helix-turn-helix transcriptional regulator	Q858D7	Salmonella_phage	1.9e-65	64.8
WP_004164029.1\|3961636_3961936_+	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
WP_004152541.1\|3961932_3962832_+	endonuclease	Q858E0	Salmonella_phage	1.5e-159	93.0
WP_004152542.1\|3962841_3963864_+	recombination protein RecT	Q858E1	Salmonella_phage	2.4e-180	95.3
WP_004152543.1\|3963915_3964164_+	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	1.1e-27	69.5
WP_004153052.1\|3964273_3964567_+	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	8.9e-32	71.1
WP_004152545.1\|3964559_3964718_+	DUF1317 family protein	T1SAR0	Salmonella_phage	1.9e-17	78.8
WP_004152546.1\|3964714_3965308_+	adenine methylase	T1SA14	Salmonella_phage	4.3e-110	92.4
WP_004152547.1\|3965304_3965487_+	hypothetical protein	NA	NA	NA	NA
WP_004152548.1\|3965483_3965675_+	hypothetical protein	NA	NA	NA	NA
WP_004152549.1\|3965691_3966942_-\|integrase	tyrosine-type recombinase/integrase	A0A1X9TCT6	Enterobacter_phage	1.4e-206	85.3
WP_004151979.1\|3967134_3968712_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_004151980.1\|3968779_3970246_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.2e-87	38.7
3969235:3969252	attR	NA	NA	NA	NA

DBSCAN-SWA_13

4041596 : 4121206

Salmonella_phage(72.0%)

capsid,terminase,plate,tail,integrase,portal,lysis,head,tRNA,coat

attL 4086300:4086346|attR 4122867:4122913

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002914079.1\|4041596_4042334_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_002914082.1\|4042465_4043797_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	6.2e-48	31.9
WP_002914084.1\|4043842_4044226_-	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	4.0e-32	79.3
WP_002914088.1\|4044539_4045229_+	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	1.3e-57	53.0
WP_002914089.1\|4045286_4046372_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_002914091.1\|4046575_4047001_+	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
WP_002914092.1\|4047070_4047769_+	DTW domain-containing protein	NA	NA	NA	NA
WP_004151994.1\|4047803_4050464_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_002914094.1\|4050584_4051940_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_002914095.1\|4051981_4052305_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_002914097.1\|4052308_4053607_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.1e-44	31.5
WP_004150973.1\|4059572_4062146_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
WP_002914109.1\|4062275_4063007_-	polyphenol oxidase	NA	NA	NA	NA
WP_002914110.1\|4063003_4063984_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_004145664.1\|4064115_4064853_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_002914111.1\|4065123_4065459_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_100250063.1\|4065565_4065613_+	hypothetical protein	NA	NA	NA	NA
WP_004150975.1\|4065713_4066874_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_002914112.1\|4066870_4067743_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_002914113.1\|4067805_4068927_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_002914114.1\|4068936_4070007_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
WP_004174804.1\|4070349_4070859_+	YfiR family protein	NA	NA	NA	NA
WP_004150976.1\|4070851_4072075_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_002914117.1\|4072088_4072571_+	OmpA family protein	NA	NA	NA	NA
WP_002914118.1\|4072579_4073950_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_002914119.1\|4074006_4074465_-	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_004220183.1\|4074454_4074592_+	hypothetical protein	NA	NA	NA	NA
WP_002914145.1\|4074584_4074932_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_002914147.1\|4074971_4075739_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_004150977.1\|4075770_4076319_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_002914149.1\|4076337_4076586_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_002914152.1\|4076845_4078210_-	signal recognition particle protein	NA	NA	NA	NA
WP_002914153.1\|4078373_4079165_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_004149392.1\|4079184_4080471_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_002914155.1\|4080590_4081181_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_002914158.1\|4081305_4082184_+	NAD(+) kinase	NA	NA	NA	NA
WP_002914159.1\|4082270_4083932_+	DNA repair protein RecN	NA	NA	NA	NA
WP_004145681.1\|4083957_4084098_+	hypothetical protein	NA	NA	NA	NA
WP_002914160.1\|4084079_4084421_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_002914161.1\|4084487_4084778_-	RnfH family protein	NA	NA	NA	NA
WP_004188817.1\|4084767_4085244_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_002914164.1\|4085354_4085837_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
4086300:4086346	attL	NA	NA	NA	NA
WP_004150980.1\|4086440_4086818_+	hypothetical protein	NA	NA	NA	NA
WP_004150981.1\|4086845_4087064_-	positive regulator of late gene transcription	Q53ZE7	Salmonella_virus	1.9e-26	72.2
WP_004150982.1\|4087130_4088225_-	phage late control D family protein	E5G6Q3	Salmonella_phage	2.4e-170	83.6
WP_004150983.1\|4088221_4088707_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.2e-61	80.1
WP_072093161.1\|4088703_4091100_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	8.1e-107	44.5
WP_002896220.1\|4091326_4091446_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_004150985.1\|4091460_4091760_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	78.0
WP_004150986.1\|4091812_4092328_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
WP_004150987.1\|4092337_4093510_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	3.4e-207	91.5
WP_004150988.1\|4093658_4094732_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.6e-40	53.6
WP_004150989.1\|4094783_4095902_-	hypothetical protein	A0A248XD67	Klebsiella_phage	4.4e-55	38.0
WP_004150990.1\|4095911_4097861_-\|coat	spore coat protein CotH	Q6QI97	Burkholderia_phage	1.0e-06	38.9
WP_004152935.1\|4097862_4098534_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.2e-61	58.9
WP_004150992.1\|4098526_4099435_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.9e-109	68.9
WP_004150993.1\|4099421_4099784_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	8.4e-48	85.6
WP_004150994.1\|4099780_4100353_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-76	70.8
WP_004150995.1\|4100447_4101314_+	hypothetical protein	NA	NA	NA	NA
WP_004150996.1\|4101336_4101783_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.5e-54	72.3
WP_004150997.1\|4101775_4102198_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	8.2e-63	83.2
WP_072093160.1\|4102160_4102319_-	hypothetical protein	A0A1S6KZX6	Salmonella_phage	9.0e-15	75.0
WP_004150998.1\|4102293_4102722_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	7.1e-54	82.5
WP_004150999.1\|4102718_4103102_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.9e-18	45.4
WP_004151000.1\|4103106_4103616_-	lysozyme	E5G6N1	Salmonella_phage	1.6e-81	85.2
WP_004134639.1\|4103596_4103812_-	hypothetical protein	E5G6N0	Salmonella_phage	6.1e-30	88.7
WP_004151001.1\|4103815_4104019_-\|tail	tail protein X	E5G6M9	Salmonella_phage	9.8e-30	89.6
WP_004151002.1\|4104018_4104483_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.5e-73	85.7
WP_004134644.1\|4104578_4105232_-\|terminase	terminase endonuclease subunit	A0A1S6KZX1	Salmonella_phage	1.9e-90	80.0
WP_004151003.1\|4105235_4106288_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	6.8e-175	91.0
WP_004151004.1\|4106304_4107138_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.4e-100	77.6
WP_019405037.1\|4107278_4109042_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	91.8
WP_004151006.1\|4109041_4110085_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	85.6
WP_024940854.1\|4110141_4110411_-	hypothetical protein	D2IZW1	Enterococcus_phage	1.4e-15	41.3
WP_004151007.1\|4110932_4111934_+	hypothetical protein	NA	NA	NA	NA
WP_004151008.1\|4111933_4113013_+	hypothetical protein	NA	NA	NA	NA
WP_004151009.1\|4112999_4113683_+	hypothetical protein	NA	NA	NA	NA
WP_004151010.1\|4113778_4114012_-	DinI family protein	A0A0M4S6H1	Salmonella_phage	2.0e-34	96.1
WP_004151011.1\|4114023_4114212_-	hypothetical protein	A0A1S6L006	Salmonella_phage	2.2e-23	90.3
WP_004151012.1\|4114374_4116759_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.9
WP_004151013.1\|4116755_4117607_-	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.2e-115	75.4
WP_004151014.1\|4117603_4117831_-	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	5.1e-35	92.0
WP_004151016.1\|4117830_4118064_-	DUF2732 family protein	A0A1S6L021	Salmonella_phage	6.0e-31	90.9
WP_004144796.1\|4118131_4118470_-	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	6.2e-29	58.0
WP_004151017.1\|4118433_4118634_-	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	4.5e-19	68.8
WP_004151018.1\|4118641_4119151_-	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.1e-77	85.8
WP_001397669.1\|4119183_4119426_-	hypothetical protein	A0A1S6KZZ6	Salmonella_phage	4.0e-38	98.8
WP_004151019.1\|4119548_4120178_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.4e-61	54.5
WP_004151020.1\|4120180_4121206_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	1.5e-190	93.8
4122867:4122913	attR	NA	NA	NA	NA

DBSCAN-SWA_14

4842758 : 4891601

uncultured_Caudovirales_phage(68.75%)

capsid,terminase,tail,portal,head,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002918465.1\|4842758_4843253_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8
WP_002918467.1\|4843256_4843895_-	stringent starvation protein A	NA	NA	NA	NA
WP_135801240.1\|4843864_4844149_-	hypothetical protein	NA	NA	NA	NA
WP_000829818.1\|4844206_4844599_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_002918559.1\|4844614_4845043_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_004144945.1\|4845308_4846436_-	cell division protein ZapE	NA	NA	NA	NA
WP_002918565.1\|4846626_4847025_+	DUF1043 family protein	NA	NA	NA	NA
WP_002918566.1\|4847198_4848566_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
WP_002918568.1\|4848653_4849712_+	outer membrane-stress sensor serine endopeptidase DegS	NA	NA	NA	NA
WP_002918570.1\|4849848_4850787_-	malate dehydrogenase	NA	NA	NA	NA
WP_002918625.1\|4851201_4851672_+	transcriptional regulator ArgR	NA	NA	NA	NA
WP_002918626.1\|4852047_4852311_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918627.1\|4852409_4852676_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918629.1\|4852726_4853002_-	hypothetical protein	NA	NA	NA	NA
WP_002918632.1\|4853081_4855049_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
WP_002918639.1\|4855054_4855987_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
WP_002918640.1\|4855994_4856198_-	AaeX family protein	NA	NA	NA	NA
WP_002918641.1\|4856329_4857259_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
WP_002918642.1\|4857294_4858740_-\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_004150952.1\|4858828_4862626_-	AsmA2 domain-containing protein	NA	NA	NA	NA
WP_002918644.1\|4862663_4864133_-	ribonuclease G	NA	NA	NA	NA
WP_002918646.1\|4864135_4864717_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_002918648.1\|4864724_4865213_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_004149974.1\|4865212_4866205_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_002918653.1\|4866275_4867319_-	rod shape-determining protein MreB	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
WP_002918686.1\|4867624_4869565_-	RNase E specificity factor CsrD	NA	NA	NA	NA
WP_002918687.1\|4869644_4869836_-	hypothetical protein	NA	NA	NA	NA
WP_002918688.1\|4870064_4871066_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_002918689.1\|4871065_4871674_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_002918732.1\|4871897_4872350_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_002918736.1\|4872372_4872840_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_002918738.1\|4872850_4874200_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_002918740.1\|4874310_4874553_+	YhdT family protein	NA	NA	NA	NA
WP_004150953.1\|4874542_4875994_+	sodium/pantothenate symporter	NA	NA	NA	NA
WP_002918745.1\|4876005_4876887_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_004144972.1\|4877244_4878210_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_000462905.1\|4878234_4878531_+	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
WP_004150954.1\|4878684_4878876_-	hypothetical protein	NA	NA	NA	NA
WP_004150955.1\|4878878_4880540_-\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
WP_000113647.1\|4880523_4880880_-\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
WP_004150957.1\|4881010_4881163_-	hypothetical protein	A0A2H4JCY9	uncultured_Caudovirales_phage	2.4e-17	88.0
WP_004150959.1\|4881155_4881599_-	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
WP_001547824.1\|4881598_4881898_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
WP_004150961.1\|4881894_4882230_-\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
WP_004150962.1\|4882226_4883468_-\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
WP_001547826.1\|4883469_4884030_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
WP_001549743.1\|4884081_4885248_-\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
WP_004150963.1\|4885511_4886024_+	hypothetical protein	NA	NA	NA	NA
WP_004150964.1\|4886072_4886408_-	hypothetical protein	NA	NA	NA	NA
WP_004150965.1\|4886750_4888886_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
WP_001549749.1\|4888885_4889251_-	hypothetical protein	NA	NA	NA	NA
WP_004150966.1\|4889247_4889616_-	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
WP_004218267.1\|4889714_4889843_+	hypothetical protein	NA	NA	NA	NA
WP_001549752.1\|4889919_4890108_-	hypothetical protein	NA	NA	NA	NA
WP_157263200.1\|4890100_4890319_-	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	1.4e-34	94.4
WP_004150969.1\|4890821_4891601_-	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP008829

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

26876 : 64973

Escherichia_phage(29.41%)

integrase,transposase

attL 46434:46448|attR 63775:63789

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004118231.1\|26876_27044_+\|integrase	integrase	NA	NA	NA	NA
WP_004118840.1\|27328_28456_+	transporter substrate-binding protein	NA	NA	NA	NA
WP_004118229.1\|28452_29046_+	ANTAR domain-containing protein	NA	NA	NA	NA
WP_004152279.1\|29042_29891_+	ABC transporter permease	NA	NA	NA	NA
WP_004118227.1\|29890_30811_+	ABC transporter permease	NA	NA	NA	NA
WP_004152278.1\|30823_32428_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004118225.1\|32472_33420_+	acetamidase/formamidase family protein	A0A1V0S8X7	Catovirus	9.6e-11	22.7
WP_004118832.1\|33427_35161_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.9e-15	29.6
WP_004152557.1\|38983_39331_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.0e-59	95.7
WP_020956879.1\|39327_39714_-\|transposase	transposase	B6DZU5	Stx2-converting_phage	1.1e-58	90.7
WP_004118217.1\|40261_40897_-	His-Xaa-Ser repeat protein HxsA	NA	NA	NA	NA
WP_000005560.1\|40893_42006_-	His-Xaa-Ser system radical SAM maturase HxsC	S5WIP3	Leptospira_phage	1.5e-47	33.8
WP_004152560.1\|41998_43387_-	His-Xaa-Ser system radical SAM maturase HxsB	S5VT21	Leptospira_phage	1.1e-50	29.0
WP_016197752.1\|43386_43617_-	His-Xaa-Ser system protein HxsD	NA	NA	NA	NA
WP_000412211.1\|44388_45048_+	type A-1 chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.4e-131	100.0
WP_000656305.1\|45248_45626_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001138064.1\|45692_48659_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
46434:46448	attL	NA	NA	NA	NA
WP_000147567.1\|48661_49222_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_000454193.1\|49347_49698_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000845039.1\|49900_50914_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001083725.1\|51058_51556_+	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
WP_001336345.1\|51667_51958_+	DUF1010 domain-containing protein	NA	NA	NA	NA
WP_001206356.1\|51963_52755_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_000679427.1\|52918_53266_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|53259_54099_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000376616.1\|54226_54430_+	hypothetical protein	NA	NA	NA	NA
WP_000184001.1\|54585_55791_+	chromate efflux transporter	NA	NA	NA	NA
WP_000130000.1\|55801_56107_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001389365.1\|56333_57098_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001137892.1\|57590_58175_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000004159.1\|58174_59413_-	MFS transporter	NA	NA	NA	NA
WP_000219391.1\|59409_60315_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_001067855.1\|60436_61141_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000018329.1\|61291_62107_+	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
WP_044117068.1\|62296_62965_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.9e-130	99.5
WP_004217321.1\|64268_64973_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
63775:63789	attR	NA	NA	NA	NA

DBSCAN-SWA_2

71442 : 133225

uncultured_Caudovirales_phage(29.41%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000019473.1\|71442_72423_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_004118209.1\|73624_73888_-\|transposase	transposase	NA	NA	NA	NA
WP_004118208.1\|73902_74166_+	hypothetical protein	NA	NA	NA	NA
WP_004152118.1\|74409_74691_+	helix-turn-helix domain-containing protein	A0A1B1IUF9	uncultured_Mediterranean_phage	5.2e-05	38.2
WP_004152117.1\|74725_75295_+	small heat shock protein sHSP20	NA	NA	NA	NA
WP_004152116.1\|75409_78205_+	heat shock survival AAA family ATPase ClpK	K4FB40	Cronobacter_phage	5.2e-129	41.0
WP_004152115.1\|78204_78402_+	hypothetical protein	NA	NA	NA	NA
WP_009483782.1\|78639_79389_+	diguanylate cyclase	NA	NA	NA	NA
WP_004152113.1\|79375_80338_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_020314316.1\|82180_83527_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_003026803.1\|83738_84221_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003026799.1\|84208_84475_-	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_004152108.1\|84650_84905_-	hypothetical protein	NA	NA	NA	NA
WP_004152107.1\|84980_85238_-	hypothetical protein	NA	NA	NA	NA
WP_004152106.1\|85286_85490_-	hemolysin expression modulator Hha	NA	NA	NA	NA
WP_004152105.1\|85523_85892_-	hypothetical protein	NA	NA	NA	NA
WP_004152104.1\|85935_86430_-	DNA-binding protein	NA	NA	NA	NA
WP_004152103.1\|86460_87036_-	hypothetical protein	NA	NA	NA	NA
WP_004152102.1\|87023_87293_-	hypothetical protein	NA	NA	NA	NA
WP_004152101.1\|87650_88001_+	As(III)-sensing metalloregulatory transcriptional repressor ArsR	A0A2H4J145	uncultured_Caudovirales_phage	1.4e-23	50.9
WP_004152100.1\|88050_88413_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_004152099.1\|88430_90182_+	arsenite efflux transporter ATPase subunit ArsA	NA	NA	NA	NA
WP_004152098.1\|90229_91519_+	arsenite efflux transporter membrane subunit ArsB	A0A2H4J144	uncultured_Caudovirales_phage	1.9e-171	74.0
WP_004152097.1\|91531_91957_+	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	2.3e-52	72.9
WP_004152096.1\|91989_92526_-	N-acetyltransferase	NA	NA	NA	NA
WP_004152095.1\|94422_94785_-	arsenic metallochaperone ArsD family protein	NA	NA	NA	NA
WP_004182005.1\|94860_95406_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_004152093.1\|95414_96128_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	2.9e-92	77.0
WP_004152092.1\|96124_96451_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004152091.1\|96782_97280_+	N-acetyltransferase	NA	NA	NA	NA
WP_031944101.1\|97329_97839_-	major intrinsic protein MIP	NA	NA	NA	NA
WP_004152086.1\|99581_99761_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_004152085.1\|99992_100427_-	copper resistance system metallochaperone PcoE	NA	NA	NA	NA
WP_004152084.1\|100643_102044_-	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	4.1e-18	26.3
WP_001188930.1\|102040_102721_-	copper response regulator transcription factor PcoR	W8CYM9	Bacillus_phage	8.7e-30	34.4
WP_004118344.1\|102775_103705_-	copper resistance inner membrane protein PcoD	NA	NA	NA	NA
WP_000025662.1\|103709_104090_-	copper resistance system metallochaperone PcoC	NA	NA	NA	NA
WP_001242438.1\|104129_105026_-	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA
WP_004152083.1\|105025_106843_-	multicopper oxidase PcoA	NA	NA	NA	NA
WP_001023257.1\|107076_107526_+	copper resistance protein	NA	NA	NA	NA
WP_004118669.1\|107814_108552_+	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JAF5	uncultured_Caudovirales_phage	1.2e-11	32.5
WP_000843497.1\|108585_108783_-	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_004098955.1\|108823_111271_-	Ag(+)-translocating P-type ATPase SilP	A0A218MNH6	uncultured_virus	7.6e-84	35.8
WP_000758228.1\|111397_111838_-	hypothetical protein	NA	NA	NA	NA
WP_004098958.1\|111924_115071_-	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	S5VTK5	Leptospira_phage	4.0e-61	22.5
WP_004152079.1\|115081_116374_-	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	NA	NA
WP_001246153.1\|116487_116841_-	cation efflux system protein CusF	NA	NA	NA	NA
WP_000475512.1\|116869_118255_-	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA
WP_001572351.1\|118444_119125_+	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	2.1e-31	35.6
WP_003032875.1\|119117_120593_+	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	1.0e-27	30.1
WP_004178091.1\|120843_121275_+	silver-binding protein SilE	NA	NA	NA	NA
WP_085955172.1\|122703_123910_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.7e-100	63.2
WP_004178088.1\|124950_126948_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	9.7e-21	25.9
WP_004152070.1\|127010_128288_+	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_020444838.1\|129270_130725_-	EAL domain-containing protein	NA	NA	NA	NA
WP_004197688.1\|131326_131584_+	hypothetical protein	NA	NA	NA	NA
WP_011977741.1\|132256_133225_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	2.5e-184	98.1

DBSCAN-SWA_3

138892 : 187337

Salmonella_phage(39.22%)

holin,terminase,integrase,tail

attL 124631:124645|attR 184427:184441

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
124631:124645	attL	NA	NA	NA	NA
WP_000523813.1\|138892_140059_+	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	1.4e-224	97.7
WP_004152062.1\|140058_141030_+	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	4.1e-150	86.6
WP_004152549.1\|142430_143681_+\|integrase	tyrosine-type recombinase/integrase	A0A1X9TCT6	Enterobacter_phage	1.4e-206	85.3
WP_004152548.1\|143697_143889_-	hypothetical protein	NA	NA	NA	NA
WP_004152547.1\|143885_144068_-	hypothetical protein	NA	NA	NA	NA
WP_004152546.1\|144064_144658_-	adenine methylase	T1SA14	Salmonella_phage	4.3e-110	92.4
WP_004152545.1\|144654_144813_-	DUF1317 family protein	T1SAR0	Salmonella_phage	1.9e-17	78.8
WP_004153052.1\|144805_145099_-	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	8.9e-32	71.1
WP_004152543.1\|145208_145457_-	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	1.1e-27	69.5
WP_004152542.1\|145508_146531_-	recombination protein RecT	Q858E1	Salmonella_phage	2.4e-180	95.3
WP_004152541.1\|146540_147440_-	endonuclease	Q858E0	Salmonella_phage	1.5e-159	93.0
WP_004164029.1\|147436_147736_-	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
WP_004152539.1\|148102_148684_-	helix-turn-helix transcriptional regulator	Q858D7	Salmonella_phage	1.9e-65	64.8
WP_004152538.1\|148837_149071_+	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
WP_004152537.1\|149218_149428_+	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
WP_004152536.1\|149427_150195_+	primosomal protein	A0A193GZ86	Enterobacter_phage	3.4e-139	91.0
WP_004152535.1\|150191_150977_+	replication protein	A0A193GYX1	Enterobacter_phage	8.2e-133	87.4
WP_004152534.1\|151096_151444_+	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	5.0e-50	82.6
WP_004152532.1\|151636_152047_+	hypothetical protein	A0A2P1MXC5	Escherichia_phage	3.1e-14	42.2
WP_004152531.1\|152030_152222_+	hypothetical protein	A0A1B1W2B6	Salmonella_phage	1.6e-05	47.3
WP_004152530.1\|152218_152644_+	hypothetical protein	NA	NA	NA	NA
WP_004152529.1\|152640_153384_+	hypothetical protein	A6N3G8	Burkholderia_virus	1.5e-19	59.5
WP_004141386.1\|153554_153767_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	8.1e-11	45.5
WP_004152527.1\|153763_154432_+	DUF551 domain-containing protein	Q6UAT8	Klebsiella_phage	1.5e-05	52.5
WP_004152526.1\|154424_154664_+	hypothetical protein	G8C7S3	Escherichia_phage	4.6e-10	48.0
WP_004152525.1\|154663_155002_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	4.7e-45	80.0
WP_004152524.1\|155076_155334_+	hypothetical protein	NA	NA	NA	NA
WP_004152523.1\|155411_155996_+\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	2.4e-89	88.1
WP_004154331.1\|155992_157468_+	hypothetical protein	Q858H3	Salmonella_phage	3.8e-280	93.1
WP_004152449.1\|157534_157846_-	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	2.5e-16	45.2
WP_004141368.1\|158647_158854_+	hypothetical protein	T1SA67	Salmonella_phage	4.8e-08	88.2
WP_004152447.1\|158868_160551_+\|tail	tail protein	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	2.3e-265	84.6
WP_004152446.1\|160547_160844_+	hypothetical protein	T1SBI9	Salmonella_phage	1.2e-33	70.4
WP_004152445.1\|160846_161527_+	peptidase	G9L6C4	Escherichia_phage	4.0e-75	83.5
WP_004152444.1\|161541_162528_+	hypothetical protein	A0A193GZ49	Enterobacter_phage	1.6e-178	93.9
WP_004152443.1\|162581_163019_+	hypothetical protein	A0A193GYT9	Enterobacter_phage	4.8e-66	91.0
WP_004152442.1\|163029_163371_+	hypothetical protein	G9L6C7	Escherichia_phage	4.0e-36	70.8
WP_004152441.1\|163421_163745_+	hypothetical protein	G9L6C8	Escherichia_phage	5.3e-46	85.0
WP_004152440.1\|163744_164350_+	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	2.8e-88	78.5
WP_004152439.1\|164349_166848_+	hypothetical protein	Q858G3	Salmonella_phage	0.0e+00	84.0
WP_004152438.1\|166847_167312_+	hypothetical protein	Q858G2	Salmonella_phage	1.5e-70	81.2
WP_004152437.1\|167311_167851_+	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	6.1e-71	80.0
WP_004152436.1\|167861_170693_+	hypothetical protein	Q858G0	Salmonella_phage	0.0e+00	75.7
WP_004152435.1\|170692_172603_+	hypothetical protein	Q858F9	Salmonella_phage	5.2e-290	81.9
WP_004152434.1\|172602_175368_+	hypothetical protein	Q858F8	Salmonella_phage	0.0e+00	94.5
WP_071531206.1\|175510_175894_+	hypothetical protein	NA	NA	NA	NA
WP_004152433.1\|175979_176669_-	hypothetical protein	G9L6E2	Escherichia_phage	1.6e-79	65.2
WP_004152432.1\|176983_177280_-	hypothetical protein	A0A0F6R8M4	Escherichia_coli_O157_typing_phage	1.1e-24	64.0
WP_004152705.1\|178861_179803_+	hypothetical protein	A0A2H5BN49	Klebsiella_phage	2.8e-164	89.4
WP_004146394.1\|180087_180492_+	membrane protein	T1SA79	Salmonella_phage	9.3e-56	84.1
WP_004146393.1\|180478_180784_+\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	2.7e-39	82.4
WP_004152706.1\|180773_181403_+	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	3.1e-90	76.4
WP_004152707.1\|181399_181882_+	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	3.0e-61	80.6
WP_004152715.1\|183750_185022_-	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	5.6e-155	63.7
184427:184441	attR	NA	NA	NA	NA
WP_004178083.1\|185021_185447_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.3e-31	49.6
WP_004178082.1\|185849_187337_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP008830

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8933 : 42817

Escherichia_phage(25.0%)

integrase,transposase

attL 17251:17268|attR 52015:52032

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152391.1\|8933_10649_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_004152392.1\|10758_13788_+\|transposase	IS3-like element Tn4401 family transposase	NA	NA	NA	NA
WP_004199214.1\|13894_14920_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.4e-87	50.3
WP_004152394.1\|14916_15696_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-89	61.8
WP_004152396.1\|15983_16865_+	carbapenem-hydrolyzing class A beta-lactamase KPC-3	A0A1B0VBP7	Salmonella_phage	2.8e-73	52.2
WP_004152397.1\|17114_18434_-\|transposase	IS1182-like element ISKpn6 family transposase	Q9MBP7	Staphylococcus_prophage	1.9e-12	24.2
17251:17268	attL	NA	NA	NA	NA
WP_004152398.1\|18710_19895_-\|transposase	ISAs1-like element ISKpn31 family transposase	NA	NA	NA	NA
WP_004152400.1\|20398_20758_+	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	3.6e-19	62.0
WP_004152402.1\|21923_22544_-	recombinase family protein	A0A219Y912	Aeromonas_phage	2.0e-09	31.5
WP_004152403.1\|22632_25530_-\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	2.7e-181	37.7
WP_001067855.1\|25602_26307_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000027057.1\|28050_28911_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_000935452.1\|29478_30783_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_001300294.1\|30821_31490_-	EAL domain-containing protein	NA	NA	NA	NA
WP_000993386.1\|31525_31762_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001277456.1\|31758_32121_-	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000105636.1\|32138_33833_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
WP_001340589.1\|33884_34307_-	organomercurial transporter MerC	NA	NA	NA	NA
WP_072093211.1\|34342_34468_-	mercury transporter	NA	NA	NA	NA
WP_004152334.1\|35199_35910_-	AAA family ATPase	NA	NA	NA	NA
WP_001044770.1\|35983_36400_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_001261282.1\|36396_36627_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_072093212.1\|36583_37045_+	hypothetical protein	NA	NA	NA	NA
WP_004153649.1\|37279_37486_+	hypothetical protein	NA	NA	NA	NA
WP_004152336.1\|37531_37840_+	hypothetical protein	NA	NA	NA	NA
WP_004152337.1\|37867_38197_+	hypothetical protein	NA	NA	NA	NA
WP_004171440.1\|38222_38621_+	hypothetical protein	NA	NA	NA	NA
WP_004152339.1\|38627_38960_+	hypothetical protein	NA	NA	NA	NA
WP_004152340.1\|38959_39742_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	4.6e-51	90.2
WP_011977773.1\|40633_40864_-	hypothetical protein	NA	NA	NA	NA
WP_004152341.1\|40955_41429_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_004152342.1\|41548_42817_-\|transposase	ISL3-like element ISKpn25 family transposase	Q6V7R1	Burkholderia_virus	5.2e-60	34.7
52015:52032	attR	NA	NA	NA	NA

DBSCAN-SWA_2

47392 : 59484

Enterobacteria_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152345.1\|47392_49420_-	SAM-dependent DNA methyltransferase	A0A220A2U5	Liberibacter_phage	2.1e-26	26.6
WP_004227314.1\|49531_49747_-	hypothetical protein	NA	NA	NA	NA
WP_004152347.1\|49971_50304_-	hypothetical protein	NA	NA	NA	NA
WP_004152348.1\|50680_51655_-	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	1.4e-105	62.3
WP_004152349.1\|51651_52857_-	ParA family protein	Q1MVJ3	Enterobacteria_phage	7.3e-205	89.0
WP_004152350.1\|53178_54075_-	RepB family plasmid replication initiator protein	Q71TL8	Escherichia_phage	3.3e-69	53.8
WP_004152351.1\|54475_55747_-	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	3.6e-154	63.7
WP_004152352.1\|55746_56178_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.0e-28	52.5
WP_004152353.1\|56409_57381_+	mediator of plasmid stability	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
WP_004152354.1\|57383_58055_+	mediator of plasmid stability	NA	NA	NA	NA
WP_001568040.1\|58115_58346_+	hypothetical protein	NA	NA	NA	NA
WP_014343518.1\|58464_58581_+	hypothetical protein	NA	NA	NA	NA
WP_004152355.1\|58782_59484_+	DNA methylase	A0A2I7RE86	Vibrio_phage	7.1e-27	36.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP008827

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP008829

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP008830

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection