CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_016887	Nocardia cyriacigeorgica GUH-2, complete genome	6 crisprs	csa3,Cas14u_CAS-V,WYL,c2c9_V-U4,DinG,DEDDh,cas3,cas4	3	17	1	0

1. NC_016887

CRISPR-Cas detection and classification

Crispr_ID: NC_016887_1

• CRISPR_ID: NC_016887_1
• CRISPR_location: 2996733-2996838
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_016887_1

Consensus_repeat	Method
TTCGGGGTCGAGTTCGGGGTCGGCG	CRISPRCasFinder

spacers of NC_016887_1

>1.1|2996758|56|NC_016887|CRISPRCasFinder
TGTGATTCCGGTAGCGGCGCCGGCTCGGGTAACGGGTCCGGTGATTGCTACGGGGG

CRISPR arrays and Neighbor proteins around NC_016887_1

CRISPR arrays

The CRISPR arrays of NC_016887_1

>merge|NC_016887|1|2996733-2996838|CRISPRCasFinder
TTCGGGGTCGAGTTCGGGGTCGGCGTGTGATTCCGGTAGCGGCGCCGGCTCGGGTAACGGGTCCGGTGATTGCTACGGGGGTTCGGGGTCGAGTTCGGGGTCGTCG

>NC_016887|1|1|2996733-2996838|CRISPRCasFinder
TTCGGGGTCGAGTTCGGGGTCGGCG	TGTGATTCCGGTAGCGGCGCCGGCTCGGGTAACGGGTCCGGTGATTGCTACGGGGG
TTCGGGGTCGAGTTCGGGGTCGTCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_016887.1|WP_014350934.1|3004900_3006496_-|GMC-family-oxidoreductase-N-terminal-domain-containing-protein	unknown	unknown	gnl|CDD|235000
NC_016887.1|WP_014350918.1|2987071_2988136_+|(R)-hydratase	unknown	unknown	gnl|CDD|184249
NC_016887.1|WP_014350917.1|2985500_2986928_+|lipase	unknown	unknown	gnl|CDD|367570
NC_016887.1|WP_048833329.1|2999718_3000024_+|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_148280628.1|2988222_2989173_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|379262
NC_016887.1|WP_014350932.1|3003156_3004176_+|esterase-family-protein	unknown	unknown	gnl|CDD|223700
NC_016887.1|WP_014350935.1|3006641_3008372_-|GMC-family-oxidoreductase	unknown	unknown	gnl|CDD|225186
NC_016887.1|WP_048833328.1|2998441_2999683_+|DUF2236-domain-containing-protein	unknown	unknown	gnl|CDD|378343
NC_016887.1|WP_014350936.1|3008472_3009162_+|MerR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|133378
NC_016887.1|WP_014350922.1|2992464_2993415_+|acyl-ACP-desaturase	unknown	unknown	gnl|CDD|153109
NC_016887.1|WP_014350930.1|3001486_3002440_+|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|176115
NC_016887.1|WP_014350924.1|2994464_2995502_-|MaoC-family-dehydratase-N-terminal-domain-containing-protein	unknown	unknown	gnl|CDD|184249
NC_016887.1|WP_014350929.1|3000037_3001291_-|glutamate-dehydrogenase	unknown	unknown	gnl|CDD|133445
NC_016887.1|WP_014350923.1|2993411_2994461_+|esterase-family-protein	unknown	unknown	gnl|CDD|223700
NC_016887.1|WP_014350920.1|2989379_2990930_-|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl|CDD|227136
NC_016887.1|WP_052315502.1|2991431_2992418_+|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_014350916.1|2984041_2985286_+|lipase	unknown	unknown	gnl|CDD|367570
NC_016887.1|WP_014350925.1|2995545_2996178_-|YdcF-family-protein	unknown	unknown	gnl|CDD|99750
NC_016887.1|WP_014350933.1|3004349_3004826_+|HAD-IIIC-family-phosphatase	unknown	unknown	gnl|CDD|319804
NC_016887.1|WP_014350931.1|3002443_3002902_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_016887.1|WP_014350934.1|3004900_3006496_-|GMC-family-oxidoreductase-N-terminal-domain-containing-protein	gnl|CDD|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	1.08709e-180
NC_016887.1|WP_014350918.1|2987071_2988136_+|(R)-hydratase	gnl|CDD|184249	PRK13693, PRK13693, (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional.	1.8213e-59
NC_016887.1|WP_014350917.1|2985500_2986928_+|lipase	gnl|CDD|367570	pfam03583, LIP, Secretory lipase. These lipases are expressed and secreted during the infection cycle of these pathogens. In particular, C. albicans has a large number of different lipases, possibly reflecting broad lipolytic activity, which may contribute to the persistence and virulence of C. albicans in human tissue.	1.17367e-29
NC_016887.1|WP_148280628.1|2988222_2989173_+|helix-turn-helix-domain-containing-protein	gnl|CDD|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	2.71628e-09
NC_016887.1|WP_014350932.1|3003156_3004176_+|esterase-family-protein	gnl|CDD|223700	COG0627, COG0627, Predicted esterase [General function prediction only].	9.10593e-53
NC_016887.1|WP_014350935.1|3006641_3008372_-|GMC-family-oxidoreductase	gnl|CDD|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	2.26707e-65
NC_016887.1|WP_048833328.1|2998441_2999683_+|DUF2236-domain-containing-protein	gnl|CDD|378343	pfam09995, DUF2236, Uncharacterized protein conserved in bacteria (DUF2236). This domain, found in various hypothetical bacterial proteins, has no known function. This family contains a highly conserved arginine and histidine that may be active site residues for an as yet unknown catalytic activity.	1.87857e-13
NC_016887.1|WP_014350936.1|3008472_3009162_+|MerR-family-transcriptional-regulator	gnl|CDD|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	2.11883e-14
NC_016887.1|WP_014350922.1|2992464_2993415_+|acyl-ACP-desaturase	gnl|CDD|153109	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain. Acyl-Acyl Carrier Protein Desaturase (Acyl_ACP_Desat) is a mu-oxo-bridged diiron-carboxylate enzyme, which belongs to a broad superfamily of ferritin-like proteins and catalyzes the NADPH and O2-dependent formation of a cis-double bond in acyl-ACPs. Acyl-ACP desaturases are found in higher plants and a few bacterial species (Mycobacterium tuberculosis, M. leprae, M. avium and Streptomyces avermitilis, S. coelicolor). In plants, Acyl-ACP desaturase is a plastid-localized, covalently ACP linked, soluble desaturase that introduces the first double bound into saturated fatty acids, resulting in the corresponding monounsaturated fatty acid. Members of this class of soluble desaturases are specific for a particular substrate chain length and introduce the double bond between specific carbon atoms. For example, delta 9 stearoyl-ACP is specific for stearic acid and introduces a double bond between carbon 9 and 10 to yield oleic acid in the ACP-bound form. The enzymatic reaction requires molecular oxygen, NAD(P)H, NAD(P)H ferredoxin oxido-reductase and ferredoxin. The enzyme is active in the homodimeric form; the monomer consists mainly of alpha-helices with the catalytic diiron center buried within a four-helix bundle. Integral membrane fatty acid desaturases that introduce double bonds into fatty acid chains, acyl-CoA desaturases of animals, yeasts, and fungi, and acyl-lipid desaturases of cyanobacteria and higher plants, are distinct from soluble acyl-ACP desaturases, lack diiron centers, and are not included in this CD.	2.26794e-117
NC_016887.1|WP_014350930.1|3001486_3002440_+|LysR-family-transcriptional-regulator	gnl|CDD|176115	cd08423, PBP2_LTTR_like_6, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	7.13539e-50
NC_016887.1|WP_014350924.1|2994464_2995502_-|MaoC-family-dehydratase-N-terminal-domain-containing-protein	gnl|CDD|184249	PRK13693, PRK13693, (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional.	2.42712e-38
NC_016887.1|WP_014350929.1|3000037_3001291_-|glutamate-dehydrogenase	gnl|CDD|133445	cd01076, NAD_bind_1_Glu_DH, NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha -beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts.	2.01325e-72
NC_016887.1|WP_014350920.1|2989379_2990930_-|acyl-CoA-carboxylase-subunit-beta	gnl|CDD|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NC_016887.1|WP_014350916.1|2984041_2985286_+|lipase	gnl|CDD|367570	pfam03583, LIP, Secretory lipase. These lipases are expressed and secreted during the infection cycle of these pathogens. In particular, C. albicans has a large number of different lipases, possibly reflecting broad lipolytic activity, which may contribute to the persistence and virulence of C. albicans in human tissue.	1.2074e-46
NC_016887.1|WP_014350923.1|2993411_2994461_+|esterase-family-protein	gnl|CDD|223700	COG0627, COG0627, Predicted esterase [General function prediction only].	1.40249e-42
NC_016887.1|WP_014350925.1|2995545_2996178_-|YdcF-family-protein	gnl|CDD|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	1.9538e-33
NC_016887.1|WP_014350933.1|3004349_3004826_+|HAD-IIIC-family-phosphatase	gnl|CDD|319804	cd07501, HAD_MDP-1_like, eukaryotic hypothetical phosphotyrosine phosphatase MDP-1 and related phosphatases, similar to Bacillus cereus phosphonoacetaldehyde hydrolase and Streptomyces FkbH. This family includes eukaryotic magnesium-dependent phosphatase-1 (MDP-1) which is most likely a phosphotyrosine phosphatase catalyzing the dephosphorylation of tyrosine-phosphorylated proteins, Bacillus cereus phosphonoacetaldehyde hydrolase (phosphonatase)which catalyzes the hydrolysis of phosphonoacetaldehyde to acetaldehyde and phosphate using Mg(II) as cofactor, and sequences annotated as FkbH including BafAIV an FkbH-like protein from Streptomyces griseus encoded in ORF12 of the bafilomycin synthesis gene cluster. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.42929e-26

Protein sequences

>NC_016887.1|WP_014350925.1|2995545_2996178_-|YdcF-family-protein
MFDSMASPTRIHSAGRPHRKRVGLRLTAATLLGAAALIGSGLHSPAAAADSTGSAEFVSGPLVQVHGPGTAIVVLGYGLLPDGSMRPELVARLRAGYIQALLAPGSPIIVTGGNPRNGVSEAVAMADWLVRHGIPAERVHLDPAAVDTVQNAHHSARIMQEIGARDAVVVTSADHIDRAVASFIGAGVPVAAAVTPDHNPVPAWVFGPMR
>NC_016887.1|WP_014350924.1|2994464_2995502_-|MaoC-family-dehydratase-N-terminal-domain-containing-protein
MSEAATTLAPADQVRALLDHRYRSSHRYTVGREKIREYARAVQDRHPAHWDESAAAALGYPGLIAPSTFASIILLRVHREILDTVLTGYDPARILHADQVIDIGRPLIAGDELTCDIYFESFRHFADYDVMAIKSVLTDATGEVVQTGSTALLARTGEAERLGEAVRRVAMTDPRADAVPGTITAAGPETVSAVVPRHIPCTTIDPASLRVGAVLPPTVLWLSRGDLVNYAGVTGDTNPVLFDERTAIECGLPTVVAPGMLKLGLAAGYLSSWLGDPAAVTRLRAQFAHNTHYLRVPALASSPIEFSGRITSLDASGRRGTVAIDARSHGRKLFGYAAAEVRFTA
>NC_016887.1|WP_014350923.1|2993411_2994461_+|esterase-family-protein
MSTRLPVTAAAMALVAAVCVTPAAAEPTESVPVLGSPGPGVETAVTRTSLIRVEVLDKQRIRLHIASAAMRRVIAIDTLIGTGPAPRPTLYLLDGVDGEKTSGWLTKGGAAEFFAGKPVDVVLTTGGTGSMYSDWVRSDAALGLNRWETFLTEELPPLVETYLGGTGVRAIAGVSMGAQAAMMLTQRHPGMYRAVAGMSGCYSTADPLGRAVTTITVASRGGNPENLWGPPSSPEWAAHDSLLGAEQLRGTAIYLSAATGAPTGVDLTEVARAPDIVAALGEMGGGAALEAGARSCTERMAARLDELGIPATVELLDQGMHTWPDFRAQLPRTWPTLATALGVSSTPPR
>NC_016887.1|WP_014350922.1|2992464_2993415_+|acyl-ACP-desaturase
MTTALTDRDILRELEPIAERQLHDHLRKAKSWNPHDYVPWDDGRNFAALGGIDWEPGQSKLSDVARVAMVTNLLTEDNLPSYHRELADTFTQDGVWGTWVGRWTAEENRHSIVMRDYLVVTRAVDPVALEQARMTHMSTGVAKPERGSQFLRSTAYVTFQELATRISHRNTGIACQEPIAERMLQRIAADENLHMIFYRTISGAALDLAPDDMLRAITDVVTRFQMPGLTQPDFRRNSVLLAKNGIYDLRQHLDVVLRPVLRAWRVFDRTDLGGEGERARDELHAFLDNLERRAVRFEERREAVAARRAERSAAAG
>NC_016887.1|WP_052315502.1|2991431_2992418_+|hypothetical-protein
MMGTQAGADISSLEAKLVRFLMRRRRGTHGGDIAATVRHCLAEAVQQLHPRSGRPGAGAEAIAGAAARWAREGVALETVLGAYHEGIRQGLEFLADHATDDDAADGSAAQLLAGTQLMVQVLELVTVTASAAYLDEHRLVAREHQTAAQTLVSALLSGHGVGALARRTGIAVAPAYQVVALAIPPHPDELDAGIGAVSAGRRKLRRVQAALAAPLGSRSLSLLSADGGTVLVPQDPASAFAPSPAMTGEVLEVVGEAAEVALTAVVISGPTQRIPELAGRAHDVLEHVRGAGHPAGLYRITEGSDADGEAGCRYLPDVPDAVRIGRSA
>NC_016887.1|WP_014350920.1|2989379_2990930_-|acyl-CoA-carboxylase-subunit-beta
MSGTREKLEQLRDILELAEEPAGEAGIAKRKQKGIPSARQRVRALVDPGSFVEIGALVRQPATGDAMYGDGVVTGRGRIDGRPVVVIAHDQTVFGGSVGEMFGRKVAAALDFALDNACPVVAINDSGGARIQDAVTSLAWYALMSRRQGKLSGFVPQVSIMLGKCAAGSVYAPVNTDVLIATEKSYMFVTGPEVIKEVTGEEVSMEELGGAHVQAANGTVHHVAATEEDAFAWARQYLSYLPSSCLEQPPVVNPGLEPERTDSDLELNAIIPDADSHGYDMHEILLRIFDDGEFHEISAATAPNLITGFSRVDGRSVGVVANQPMALGGAIDAQCSDKATHFIRLCNAFGLPLIFVVDTPGVLPGVEEERNGVIKRGGRFFRAVLEATVPIVTVVVRKAYGGGYAVMGCKQLGADISLAWPTARIAVMGAQSAVSIVGRKQLSMVPADQRAAVRDYMIDQYNATTATPWIAAERGYIDAVIEPADTRLEIRRALRLLREKGSVAEHDPRRHSLFPV
>NC_016887.1|WP_148280628.1|2988222_2989173_+|helix-turn-helix-domain-containing-protein
MGASELRSVPIGVPHPAGERTPAVDGGPTVLRMVLGGRLRRLREGAGITREAAGEHIRGSHSKISRIELGRTPIRERDLVDLLTLYGMTDPAEVGEFRRLAEEAGSSGWWHRDNDWLPKWFDMYLGLEQAAAMIRGYEPRAVPELLQTPDYARALIRLAHPTESEDGIERRVALRMRRQEILTRPDPPQLWLMVEEAALRRRIGGTAVWSEQLDRLLAAVEQPNVTVQLLADHVGGPALTEGAFTMLRFAEPDLPDIVYIQQLTGALYLDKRADLDAYRTVANQLSVHAAAPEHTPDLLRALRSREQPILRHPSAE
>NC_016887.1|WP_014350918.1|2987071_2988136_+|(R)-hydratase
MNHTSTTASAQAAALVGRHYRMIDHYEVGREKIREFARALQDHHPAHWREDAAAALGYDTLIAPLTFPSVVWLQMQRAMFEAVLTGYDISQVLQTEQTIRMYRPLVAGDRLRCDAYVESFRQFGDKDFMVTRNVLSDEHKEVVQVAHTTVVAVTGSVVTDELAAAVDGVIMSGHSKADRLAMAARRAEHDDEPAVMECFDQLSPAEPEPARPSRARIRFDDVAVGDTLPARTIALSRGDLVNYAGVSGDSNPIHYSDRVARAAGLPDVVSHGLLTMGLGAGYVTEWLDDPAAVAYYGVRFAGFAPIEATRAGAVEFQGRIKALDPARRSATVAITATCGGRKLFGRATAEVLLR
>NC_016887.1|WP_014350917.1|2985500_2986928_+|lipase
MKSLRAVVVATLVAGVLMSTGPAAAQPPLPAPPPPVPALGLPLPPPPALPDPATILPGIQQWIDQVIPPPPIPPLPAGPAPAPALTSPALAALHQAVLPSPVGDPMFDLWPADLAGFRNGEVLAVRDVTATAGLLLTVPIARAQLVKYRTEDAHGRPSFATATLAVPAAAWTGPGARPVVVNNLPIDALGRDCTPGYTLAHGFTAHTALTDFIPPTSQLALLRGYALLIPDHEGPRMAYAEPYVAGHAVLDGIRAVRGLAPHEFGASRFAITGYSGGAIATHGAVKLIETYAPELAPVIAGAALGGVPADYEVLARSMNANLASGVFMAAVLAIGRERPEILDRMNHLAQWVATSPMKDQCVSVFALPGILHLPIDIAADMADPLRSPLAAEIYRVTRMTGLRSATPLYIYHGEHEWWLPADAARALFAEQCALGATAVYRNVFGEHIIAAGLGYPEAMLWLDERLRGVPAASEC
>NC_016887.1|WP_014350916.1|2984041_2985286_+|lipase
MWQAKPSTGKGRPRRRLLRAAGALAAGVVLVLGTAAQASTAPLYPAPDPDPFYAEPPGLAEKKPGDVLAVRQMPPLAMFPDTTVTVVRFRSTNSTGKPIAATTTVLTPRSHRKDGPLLSLQHIINALGAKCSVSRVLYTDDPDLMVREAPAWNVLLQRGWSIALPDHLGPQFAYGAAKLGGQVTLDGIRAVQRVGELQVENSPVSMIGYSGGGMATAWAAALQPTYAPELKIAGAAMGGVPMNLVKMLEGLGFGSHPVFGLAMAAGIGLEREYPERFPISDQLNAKGLAARAAMANSCTNGLLTTGAGHGVLDFAATTSMVDDPQARAVVEENSLELYDGAPTMPVFEWHSPIDGLVPVDAIVNTNRRWCAAGTKVQAETVAVPDHLTAAVLGLPAALVWVDARFRGEPAPSNC
>NC_016887.1|WP_048833328.1|2998441_2999683_+|DUF2236-domain-containing-protein
MDGLNRRNALKAGGILGALGAMAVVSPARAEPWTWSPNGSVAGSGTGADPMTVWDPEADELVAGLIDRGDVPRVNELLRTWTANGQPLPAGLPADLRDFMEYARQMPHWTDPAKLNTAIEFNKKRGLYLGVLYGFASGMMSTVIPKEARAVYYSKGGHDLKDRITKTAKLGYDIGSNNAYAPDGEMVVTCVKTRLVHAAVRHLLPQSPHWVQSAEEDIPISQNDMMVTWHSLPTTVMKHLTNWKVPIPPHESEAFLHSWQVAAHMLGIRDEYIPNSWPEANSQAAQVLDPILAATPEGAKLADRLLGLGANVDFAILSKPVLGSFTRFLLGDRIADGLRIPREPLWDPLLQFSWGPFIAVREGVLTVAPPAADVYWLFDEFLRKGALTYLSELRMPISIEIPTMNRDMSKPHR
>NC_016887.1|WP_048833329.1|2999718_3000024_+|hypothetical-protein
MRNTLRCAAASVAAASLVAAAAGANAESPASVAPVAEAGTGSSMLDAGSSAAQSAGYLAQRGDIIGVLVLLGITPFQMLTSGICDLATGSGLGNPCSPSRY
>NC_016887.1|WP_014350929.1|3000037_3001291_-|glutamate-dehydrogenase
MTTMHEPVGGPAQASAHDVAALTAPPAAPAIRRTEPYLRLHWTDSHTGAVGYLVVHTLRAGLATGGTRMRAGCTLSEVEDLARGMAAKTATFDLPVGGAKGGIDFDPKDPRAVEVLERFCEAMRPWLDAHWVTAEDLGVPQHLIDAVFDTLGLGQSYHAAIRRAADPAATLARVRRGLDAAVDGGFLLGDVIGGYGVAHACLAAAVWWGQAPSGTTVAIQGIGTMGGAAAYYLHEAGMTITAIADAAGTLHCADGLDIPALLALRDGYGEIDRSRLPEGIEQLPRSAILSCEADILVPAAISYAITPDNSFGIRARIVVEAANAATTPEAEAMLAARGIPVVPDFVANAGAVAWAWWLLLGEVDDDPDTSFDRLRTIMHAKVAQLLAAWAEQGLTPREAGQRWADDPAPIAGPVVIP
>NC_016887.1|WP_014350930.1|3001486_3002440_+|LysR-family-transcriptional-regulator
MDLSLARLRMLRELHRRGTITAAATALHYTASAVSQQLAQLERDVGTRLLERRGRRVQLTDQGVLLAEHAEEILASVERATQALEDAADSVTATLTAGVWASVASGLLPDALNALARTHPGILVRTRELAPESTAAAVRDGALDLSFVLDYSNYPMAWDRGLERAVIAVERLYAAVPAGAVPATSITLAELAEHPWILAPARSHFGHAVRLAFQSAGVAPRIDHEVEEQATAMAMVAAGLGVTLVSDLGLALRPPGVDVVALGDILTRTVSLAYRTTTARRAALLLVVDAIRAAAQDKGLGADTALPNLSEIAPPPR
>NC_016887.1|WP_014350931.1|3002443_3002902_-|hypothetical-protein
MKRFRGYLVRSTAAAAALAAGAVLAGCGDDESSDPVPGTPDMPTITMTTPGATTSPDGDDDTVTPQAAQQLCDMIEPELDNWRDQGSTVAKVSFNGTVQNWAARNEGLNDEVIRDNSIVDTVTTQTCPDVRQQAIDILEVPDLASALAGWDN
>NC_016887.1|WP_014350932.1|3003156_3004176_+|esterase-family-protein
MIGSGLARRGRRVAIALAVVAAASGVAVGPSATAEPASSITGSWAIDDRTVQLRVHSASMDTDIMVNVQRPADRSVPRPVLYLLNGGGGGQDSATWQKNTDVLRFLADKDVNVVQPIGGRWSYYTDWRARDPKLGVYKWKTFLTEELPPLIDAEFGTTGVNAIAGLSTSGTSVLQLPIAKPGLYRAVAAYSGCAQISDPIGQQFVKLAVESWGGGDTDNMYGPPGDPMWAANDPYVNAEGLRGLKLFISTGTGIPGMFDVYNGTHMQPGPRGFANQLVLGGLIEAAVNWCTHNLRDRLHQLGIPATFDFQPTGTHSWGYWQQAMKDSWPVLADGLGLPR
>NC_016887.1|WP_014350933.1|3004349_3004826_+|HAD-IIIC-family-phosphatase
MQPALRCLVWELDNTLWDGVVYDGTVGALDRSALRTLRILSERGMWHAVASRGDRARTTEMLRRHGLHEMFSVVEIGWGRKSSAIVRISNTLGLRLDSIGFVDPEPVERAEVARALPLVRCYAARNAGMLLNHPDFRPVVRPERDPTPPLGFARVPAR
>NC_016887.1|WP_014350934.1|3004900_3006496_-|GMC-family-oxidoreductase-N-terminal-domain-containing-protein
MSTGEVAADYVIVGAGSAGAALAARLSDDPDTTVVLLEAGPQDKNKFIHIPAGFSKLFRSEVDWDYLTEPQPELDGRQIYWPRGKTFGGSSSMNAMMWVRGFRADYDEWALLAGEDWSFAKVVEQYRRIENVEGAQYPDEGTGGPLHISHQRSPRGLTAAYLEAVRECGFPVEPANRPAPEGFSQTMVTQRGGRRWSTADAYLRPALRRPNLIVRAEALATRVLFDGTRATGVEFRQGGATVTATARREVVLCGGAINSPQLLMLSGIGDREELSRLGIETVHHAPEVGANLQDHLVSAVGYGVGSDSLFAAEKPRQLLDYLLRHRGMLTSNVGEAYGFLRSDPELELPDLELIFAPAPFFYEGLREPTEHGVVLATVLLRPHSRGRISLASKDPAAKPVIDPRYLSDAEGADRAAILSGLRTCVRLAESPALKSVLGPIIYPPQPPADIEQTLELSLNRYSHTLYHPAGTCRMGTDSASVVTPQLEVRGVQGLRVADASVMPVLVRGHTHAPSVLIGEQAATFIKRGANS
>NC_016887.1|WP_014350935.1|3006641_3008372_-|GMC-family-oxidoreductase
MSQHATDYDVLIVGSGFGGSVTALRLVEKGYKVAVIEAGRRFADDELPKTSWDLRKFLWAPKLGCFGIQRIHPLRDVLILGGAGVGGGSLNYANTLYVPPEPFFQDAQWREITDWRDELSPYYEQAQKMLGVVRNPHMTPADEVFKQVAEDMGVGDTFVQTPVGVFFGEPGKTVEDPYFGGVGPERTGCLECGDCMVGCKFGAKNTLVKNYLYLAEKAGAQVIPMTTVTALRPQPDGSWEVATERTGAWVRKNPAVYTARHVVLAAGTLGTQKLLHAMKDQGVLPELSDRLGVLTRTNSESIVGAATKKVVPGQDFTKGVAITSSIHPTPDTHIEPVRYGKGSNSMGLLQTLMVDGGGRIPRWLRFLGIALLHPLTLLSFLSVRNWSERTIISLVMQHLDNSITTYTKRGLFGRKLTSKQGHGEPNPTWIPAGNDVTRRVAEKIGGVAGGTWGEVFNIPLTAHFLGGAAIGADREHGVIDAYHRVYGYPTLSVVDGAAVSANLGVNPSLTITAQAERAAAYWPNKGEQDLRPEQGAPYQRIAPIAPHHPVVPAHAPTALKLPTIPARRSDSAPAAG
>NC_016887.1|WP_014350936.1|3008472_3009162_+|MerR-family-transcriptional-regulator
MSRYSRTQLAELSGVPARTIRYYHSLGLLPKPERVGKEALYRTEHLDRLRDILAMQARGLRLDAIREVFATETGTGTSDWRAVFDPRKPGHADQSTVLDDDELSELLGDRRPDILDELQAAQYLERRGENWAIPDLPMLKGALILYDVGTDVTLSGALRKLIRARIADLADEMVRTFRDAAATSYGGEGIGSDLSRFRDRFRAAAWEVGGATLADEIERAVAELDESGH

Crispr_ID: NC_016887_2

• CRISPR_ID: NC_016887_2
• CRISPR_location: 3956326-3956660
• CRISPR_type: Orphan
• Repeat_type: I-E
• Spacer_info: 5 spacers

Consensus repeat of NC_016887_2

Consensus_repeat	Method
GGGCTCATCCCCGCGCGTGCGGGGAGCGCA	CRISPRCasFinder
GGGCTCATCCCCGCGCGTGCGGGGAGCGC	CRT
GGGCTCATCCCCGCGCGTGCGGGGAGCGCA	PILER-CR

spacers of NC_016887_2

>2.1|3956356|31|NC_016887|CRISPRCasFinder
GTGAGTACCTGGTGTTGTTCGAGCATGCTCA
>2.2|3956417|31|NC_016887|CRISPRCasFinder,PILER-CR
CAGCGGCGTCGATCTTGTTGGGTGAGTCGGG
>2.3|3956478|31|NC_016887|CRISPRCasFinder,PILER-CR
ACTCCTGGACTGCCGTGTCGAGGTTCATGCT
>2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR
GCCCCGGCCGGGTTGGTCGGGGCGCCTTGCT
>2.5|3956600|31|NC_016887|CRISPRCasFinder,PILER-CR
TTCTGTCCGACACCAACGTCTACAACCGGGC
>2.6|3956355|32|NC_016887|CRT
GGTGAGTACCTGGTGTTGTTCGAGCATGCTCA
>2.7|3956416|32|NC_016887|CRT
ACAGCGGCGTCGATCTTGTTGGGTGAGTCGGG
>2.8|3956477|32|NC_016887|CRT
AACTCCTGGACTGCCGTGTCGAGGTTCATGCT
>2.9|3956538|32|NC_016887|CRT
CGCCCCGGCCGGGTTGGTCGGGGCGCCTTGCT
>2.10|3956599|32|NC_016887|CRT
ATTCTGTCCGACACCAACGTCTACAACCGGGC

CRISPR arrays and Neighbor proteins around NC_016887_2

CRISPR arrays

The CRISPR arrays of NC_016887_2

>merge|NC_016887|2|3956326-3956660|CRISPRCasFinder,CRT,PILER-CR
GGGCTCATCCCCGCACCTGCGGGGAGCGCGGTGAGTACCTGGTGTTGTTCGAGCATGCTCAGGGCTCATCCCCGGGCGTGCGGGGAGCGCACAGCGGCGTCGATCTTGTTGGGTGAGTCGGGGGGCTCATCCCCGCGCGTGCGGGGAGCGCAACTCCTGGACTGCCGTGTCGAGGTTCATGCTGGGCTCATCCCCGCGCGTGCGGGGAGCGCCGCCCCGGCCGGGTTGGTCGGGGCGCCTTGCTGGGCTCATCCCCGCGCGTGCGGGGAGCGCATTCTGTCCGACACCAACGTCTACAACCGGGCGGGCTCATCCCCGCGCGTGCGGGGAGCGCA

>NC_016887|2|2|3956326-3956660|CRISPRCasFinder
GGGCTCATCCCCGCACCTGCGGGGAGCGCG	GTGAGTACCTGGTGTTGTTCGAGCATGCTCA
GGGCTCATCCCCGGGCGTGCGGGGAGCGCA	CAGCGGCGTCGATCTTGTTGGGTGAGTCGGG
GGGCTCATCCCCGCGCGTGCGGGGAGCGCA	ACTCCTGGACTGCCGTGTCGAGGTTCATGCT
GGGCTCATCCCCGCGCGTGCGGGGAGCGCC	GCCCCGGCCGGGTTGGTCGGGGCGCCTTGCT
GGGCTCATCCCCGCGCGTGCGGGGAGCGCA	TTCTGTCCGACACCAACGTCTACAACCGGGC
GGGCTCATCCCCGCGCGTGCGGGGAGCGCA

>NC_016887|2|1|3956326-3956659|CRT
GGGCTCATCCCCGCACCTGCGGGGAGCGC	GGTGAGTACCTGGTGTTGTTCGAGCATGCTCA
GGGCTCATCCCCGGGCGTGCGGGGAGCGC	ACAGCGGCGTCGATCTTGTTGGGTGAGTCGGG
GGGCTCATCCCCGCGCGTGCGGGGAGCGC	AACTCCTGGACTGCCGTGTCGAGGTTCATGCT
GGGCTCATCCCCGCGCGTGCGGGGAGCGC	CGCCCCGGCCGGGTTGGTCGGGGCGCCTTGCT
GGGCTCATCCCCGCGCGTGCGGGGAGCGC	ATTCTGTCCGACACCAACGTCTACAACCGGGC
GGGCTCATCCCCGCGCGTGCGGGGAGCGC

>NC_016887|2|1|3956387-3956660|PILER-CR
GGGCTCATCCCCGGGCGTGCGGGGAGCGCA	CAGCGGCGTCGATCTTGTTGGGTGAGTCGGG
GGGCTCATCCCCGCGCGTGCGGGGAGCGCA	ACTCCTGGACTGCCGTGTCGAGGTTCATGCT
GGGCTCATCCCCGCGCGTGCGGGGAGCGCC	GCCCCGGCCGGGTTGGTCGGGGCGCCTTGCT
GGGCTCATCCCCGCGCGTGCGGGGAGCGCA	TTCTGTCCGACACCAACGTCTACAACCGGGC
GGGCTCATCCCCGCGCGTGCGGGGAGCGCA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_016887.1|WP_048833493.1|3967036_3967702_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NC_016887.1|WP_014351804.1|3965509_3967000_-|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224983
NC_016887.1|WP_014351803.1|3964968_3965325_-|preprotein-translocase-subunit-YajC	unknown	unknown	gnl|CDD|376903
NC_016887.1|WP_048833490.1|3947439_3948351_-|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_014351797.1|3955598_3955886_-|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_014351794.1|3950343_3952755_-|RelA/SpoT-family-protein	unknown	unknown	gnl|CDD|213552
NC_016887.1|WP_048833491.1|3948408_3950097_-|cutinase-family-protein	unknown	unknown	gnl|CDD|366455
NC_016887.1|WP_014351801.1|3961911_3963102_-|protein-translocase-subunit-SecF	unknown	unknown	gnl|CDD|237275
NC_016887.1|WP_014351806.1|3967763_3968342_+|DivIVA-domain-containing-protein	unknown	unknown	gnl|CDD|188337
NC_016887.1|WP_048833492.1|3960163_3961894_-|peptide-binding-protein	unknown	unknown	gnl|CDD|173866
NC_016887.1|WP_014351790.1|3945910_3946552_-|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_148280677.1|3953242_3953752_-|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_014351802.1|3963098_3964859_-|protein-translocase-subunit-SecD	unknown	unknown	gnl|CDD|235615
NC_016887.1|WP_014351796.1|3953748_3955599_-|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_014351788.1|3945151_3945448_-|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_014351798.1|3957121_3958585_+|ATP-binding-protein	unknown	unknown	gnl|CDD|224586
NC_016887.1|WP_014351807.1|3968376_3969453_-|Holliday-junction-branch-migration-DNA-helicase-RuvB	unknown	unknown	gnl|CDD|234619
NC_016887.1|WP_014351791.1|3946548_3947424_-|hypothetical-protein	unknown	unknown	gnl|CDD|349756
NC_016887.1|WP_014351789.1|3945509_3945914_-|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_014351799.1|3959552_3960125_-|adenine-phosphoribosyltransferase	unknown	unknown	gnl|CDD|235028

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_016887.1|WP_014351803.1|3964968_3965325_-|preprotein-translocase-subunit-YajC	gnl|CDD|376903	pfam02699, YajC, Preprotein translocase subunit. See.	1.40595e-27
NC_016887.1|WP_014351804.1|3965509_3967000_-|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|224983	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].	2.98122e-97
NC_016887.1|WP_014351794.1|3950343_3952755_-|RelA/SpoT-family-protein	gnl|CDD|213552	TIGR00691, PppGpp_synthetase., (p)ppGpp synthetase, RelA/SpoT family. The functions of E. coli RelA and SpoT differ somewhat. RelA (EC 2.7.6.5) produces pppGpp (or ppGpp) from ATP and GTP (or GDP). SpoT (EC 3.1.7.2) degrades ppGpp, but may also act as a secondary ppGpp synthetase. The two proteins are strongly similar. In many species, a single homolog to SpoT and RelA appears reponsible for both ppGpp synthesis and ppGpp degradation. (p)ppGpp is a regulatory metabolite of the stringent response, but appears also to be involved in antibiotic biosynthesis in some species. [Cellular processes, Adaptations to atypical conditions].	0
NC_016887.1|WP_048833491.1|3948408_3950097_-|cutinase-family-protein	gnl|CDD|366455	pfam01083, Cutinase, Cutinase.	2.58745e-08
NC_016887.1|WP_014351801.1|3961911_3963102_-|protein-translocase-subunit-SecF	gnl|CDD|237275	PRK13022, secF, protein translocase subunit SecF.	2.23027e-105
NC_016887.1|WP_048833492.1|3960163_3961894_-|peptide-binding-protein	gnl|CDD|173866	cd08501, PBP2_Lpqw, The substrate-binding domain of mycobacterial lipoprotein Lpqw contains type 2 periplasmic binding fold. LpqW is one of key players in synthesis and transport of the unique components of the mycobacterial cell wall which is a complex structure rich in two related lipoglycans, the phosphatidylinositol mannosides (PIMs) and lipoarabinomannans (LAMs). Lpqw is a highly conserved lipoprotein that transport intermediates from a pathway for mature PIMs production into a pathway for LAMs biosynthesis, thus controlling the relative abundance of these two essential components of cell wall. LpqW is thought to have been adapted by the cell-wall biosynthesis machinery of mycobacteria and other closely related pathogens, evolving to play an important role in PIMs/LAMs biosynthesis. Most of periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the LpqW protein. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.0384e-66
NC_016887.1|WP_014351799.1|3959552_3960125_-|adenine-phosphoribosyltransferase	gnl|CDD|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	1.66914e-70
NC_016887.1|WP_014351806.1|3967763_3968342_+|DivIVA-domain-containing-protein	gnl|CDD|188337	TIGR03543, divI1A_rptt_fam, DivIVA domain repeat protein. Members of this protein family contain two full and two partial repeats of a domain found at the N-terminus of Bacillus subtilis cell-division initiation protein DivIVA. The portion repeated four times in these proteins includes the motif GYxxxxVD.	8.3946e-18
NC_016887.1|WP_014351802.1|3963098_3964859_-|protein-translocase-subunit-SecD	gnl|CDD|235615	PRK05812, secD, preprotein translocase subunit SecD; Reviewed.	5.13485e-118
NC_016887.1|WP_014351798.1|3957121_3958585_+|ATP-binding-protein	gnl|CDD|224586	COG1672, COG1672, Predicted ATPase (AAA+ superfamily) [General function prediction only].	3.61837e-11
NC_016887.1|WP_014351807.1|3968376_3969453_-|Holliday-junction-branch-migration-DNA-helicase-RuvB	gnl|CDD|234619	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB.	0
NC_016887.1|WP_014351791.1|3946548_3947424_-|hypothetical-protein	gnl|CDD|349756	cd02036, MinD, septum site-determining protein MinD. Septum site-determining protein MinD is part of the operon MinCDE that determines the site of the formation of a septum at mid-cell, an important part of bacterial cell division. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein.	0.000467957
NC_016887.1|WP_048833493.1|3967036_3967702_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.78097e-13

Protein sequences

>NC_016887.1|WP_014351797.1|3955598_3955886_-|hypothetical-protein
MTLGVEPDQIKAMATSWRQEADEVGKLAWSAMAEATGEGSSVLAAVRGAADPAKQAMTSIATRYTTLADLLDKFAVDVEAKDAEIGAEIGKLSPR
>NC_016887.1|WP_014351796.1|3953748_3955599_-|hypothetical-protein
MRPTISQLEGWNIEGLHNAAEAARKNADILFTSVNDASRAMSAAGEWHGQTKDAAGRRIDEEVDHGYEVRNVLLRIADDAEDAYQGMKHARAYVLDQKKHAVDAGFTVHDDGKVTHDDPEKEGDAGVIQINISSGLDELERLDNQYGTTLNDALTDLGAMRDGQQDITMPDGTQLDPDALVTQLASMSPDQRATVIAGLSPEAQRQLVIAAPEKLGNMNGVPFTMRIDANEINIRNALTTEKQKPEQDQDKDRINQLEAMLAPMPNPHGAGVLNSEPQATGADGTPRRDMVDRKYVMFSTEGNGRMIEMVGEMKADAPGVGVYVPGTSTNLNDSSPNHTAAWNLADQTGGPIFLYMEGDFPQSLASPTDGAPSPKFAAEMAPKLVDFGREVDREVAAHSPGTPVSYVGHSYGGSIVGSAEQLGLRADRVIHASSAGTGVFEGNWNNPNPNVQRYSMTAPGDIIGVVQSYPDEGLRLPGGIQTPGNPHAGNPLGGDPDEIPGVTRLDTGYYGTEFDGHKAGEVVFGPDGHGKYWDDPKSDAFKNIVGVIKGTEVTEYVERGIETSWVDVGLGDDGNGGKEAFDAGKAATAGKMFDVDPYSNPHVTDNPERGQTIDVK
>NC_016887.1|WP_148280677.1|3953242_3953752_-|hypothetical-protein
MRTTLCALGAASLLLLAVGCGSVIDEGPTNDDIKNTTGLTVEQAARVVYDNLNLVWPNPVEPRLDQVGKIGCRTNPNSMRSEGPPWQVEKKMVKEDPSPELVEQVRANLDSLTERGFVLEDFTIIDDHPLDRVYTNGDGYVIQSSMEIDRRVTDIPILEVASRSPCAAE
>NC_016887.1|WP_014351794.1|3950343_3952755_-|RelA/SpoT-family-protein
MTQHLGEANVEQSAASRPGGVPATSSDGAAGQSAKPANPGPNPEVVRQSAAVPTSASRRVRARLARRMTGQRGIAAVKPVLEPLATVHRELYPKANLTLLQRAFDVADERHAKQFRKSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYSLEQLTADFGAEVAHLVDGVTKLDKVNLGAAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPPEKQAKKAKETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYDEIVRLVADRAPSRDTYLAKVRAEIVNTLAASRINAIVEGRPKHYWSIYQKMIVKGKDFDDIHDLVGIRILCDEVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPDGKPLEVQIRTQDMHRTAEFGIAAHWRYKETRGKHSSDTAEVDDMAWMRQLLDWQREAADPAEFLESLRFDLKAPEIFVFTPKGDVITLPQKSTPVDFAYAVHTEVGHRCIGARVNGRLVALERQLENGEVVEVFTSKAQNAGPSRDWQSFVVSPRAKAKIRQWFAKERREEALESGKEQINKEVRRVGLPLQRLMNVDAMNAVAKELHYTDISTLYTAVGEHQVSAHHVVQRLMAQLGGIGDVENELAERSTPSTVPSRQRVSGDAGVLIPGAEGTVAKLAKCCTPVPGDEIMGFVTRGGAVSVHRVDCTNAGSLQAQSERIIEVEWAPSPSSVFLVAIQIEALDRTRLLSDVTKVLADEKVNILSASVATHGDRVAISKFTFEMGDPKHLGHILNVVRNVEGVYDVYRVTSAA
>NC_016887.1|WP_048833491.1|3948408_3950097_-|cutinase-family-protein
MAGCTTRLSGVLVALAVAVSTATAGTVAGGAASAQAPNVAGPSTNLPIDSCPALYALGIQGTGQSSPDAAPTTDTGMLSTVFMPMMAKAPDDGLVDRAYVPYESGFGGATGGGVVPYSESVAGGLSRLRSMASSVAERCPETRFGIVGYSQGAHVASIFAQEVGQGSGVLPPEKVAAVALFADPTRNPGAPLFPGAPGKATPDAAPGTEGEELARIVALPQVPASGGGIGPERDKAENFGALTGRVASFCAAGDLACDAPEGAPILKAVANIAGQAKLSGGDPIASLVSVAQALAYTSIKTATKVVNEDIQGNSLASLSLSPKKSISQRLAEAADPRTPLDIPAALRALLKVGMIGLNAVVTVVRTVLNPAALADLATAGLSNPPAALVSLGTKLVGAVPQLIPPTTGVRLVNQAFDAVVQNITDNKELLNTTTWVRYWDTVQRHGAYGTATVSADGDAPTTFVAEWFAAVARDLAGTFGSDTAPLPGSETAREGPSTPAPGFAEPGPGASTSPDQSGTGQFPFGTGVDGASFGGATADRTIEPIATTERPDTSTTYPFSTN
>NC_016887.1|WP_048833490.1|3947439_3948351_-|hypothetical-protein
MLKSYKQLNRWYGALEPETGSSAPARPAEESAPIADEDDGPARYPDYIPDEQPVAPPEPPVRRSEFTGGWSDWVADRAPGPDDDYTPRNGDVVRFPWPDDDPEEVAEPVRLRAARDLRTAGKSSGGGRARALVVLIATVLLLAAAAAGVLYLLGDSGERRAGDETAVQFTAGSFESTAGPAQRCPTERTDEVVRSAEAGGTDSGPDAILRFQYAYYVDRSAVLAREVVAPGAPVSPASVIQRGIDSIAAGTTHCVRIVTLDQGRYSVEVTEYRPDGQPATYSKQMVTTAVIGGRTLITGITAG
>NC_016887.1|WP_014351791.1|3946548_3947424_-|hypothetical-protein
MGDDWSRWLDDAPDADAPSDRSGRRKAPVVRLRGEHGSARGARAGHRPVLVVGGCGGAGTTTTALGLAGELALSGAQTVAVDATAAGSDLGLRGADEHLHPISLQSWLYGRGGDEPAPLKECLSRSTSGFGLLWRDAAPLRRRASYLTVARAIDDAGYTAVYDGGHPIAGRQLRPLLDDADVALVLAIPARTDAANRLRVTLEWLDDEFGDSADGPGSGIVGDTTIVISHQQPGVDSRVADHLREHLSGWVRDIVEIPYDAHLARGELVRHISLDDKTRRAYGSLLAGVAS
>NC_016887.1|WP_014351790.1|3945910_3946552_-|hypothetical-protein
MTAAMNLRRRRPEPAPAGVIAPPESRRAPIWDRPVPGAGRAPLVWLLGVHGGAGASSLAHVLAPAADSGRRWPGVFDRESPFVVLVCRETIAGLTRAHDLLRQHHAGFAGPSEVLGLITVAARPGRMPAEIRRYREVVGSLAGRMWQVPWYEEWTLVEPEKLPVWAPGVEPPLKKRRIDPLDEVPLELRELGTEIVAAAREAIADEANEEGAL
>NC_016887.1|WP_014351789.1|3945509_3945914_-|hypothetical-protein
MSTMLALHEGAQAILAQVGNPTPEAPPAADAGLQASRWGFWALVIGLPLAAIGVVAFVLVRVSNSDRRHVPAPHGWAAQGQPPGWNVPGPHSVPLPGPAPSGWNQQPGAWGPNGAGTGQPGWDRPPLTTNPPGH
>NC_016887.1|WP_014351788.1|3945151_3945448_-|hypothetical-protein
MSTILLAVQDTYGTVLAQVGNPTPEAPPGSEKILQLVRYLTWFVLLSGICGITYAGGKFAWEKWTGGGLESPKMVAGAMIGGVVATSAGTIMNAVIGT
>NC_016887.1|WP_014351798.1|3957121_3958585_+|ATP-binding-protein
MDKPVDMFDRDHEWSALSRFVSDDRAGATLGVVSGRRRQGKTFLLEAMCQAAGGFYFGATEAADAESLRRISSALTEHLRPASPFHFAHWAEVIDALLGLGDKGPVPVVIDEFPYLAKANPELPSIIQEAFRPLRGQRATSRTRLLLCGSALSFMGKLLSGSAPLRGRAGLELLVRPLDYRLAAQFWDITDPLLAVRVNAIVGGTPAYRREFARGDVPADAADFDSWVERTVLNPETPLFREPRYLLAEEPDLRDAGLYLSVLGAVANGNATRGGIAGYLERRAADLTHPINVLEDVGLLRRDADVFRQNRSAYRITEPLVAFYHAIMRPVWDQLERPGSAHRVWRASRHRFTSNVLGPHFEQICREWSLHHADPELFGELPARVGHGLVHDPATRTNHEIDVAVIGLSDGGKPPLLAIGEAKWNDTMGQAHIDRLRHIRTLIEKTGRYDTRRTRLILFSGAGFNGKATDAAADSDISLIGLPELYG
>NC_016887.1|WP_014351799.1|3959552_3960125_-|adenine-phosphoribosyltransferase
MSKHAAIESDDAVAERTSKAAQLVERMTRWCDDFPEPGVRFADLTPVFADPEGFRTVIDCLAASAPDADLVAAVDARGFLLGAGVAATLGTGVIAVRKAGKLPPPVVTREYDLEYGKAALEIPADGVALTGRRVLLLDDVLATGGTLAAAADLFTQAGAEIVAAAVVLELESLGGRKRQGSYPLTAIVTV
>NC_016887.1|WP_048833492.1|3960163_3961894_-|peptide-binding-protein
MREPRGFRRRPHRLLAAAAAAAVAAGLVAGCSSESQVPSIGFAVDAAVASYNGGSTLGASTGATAVFGRVLTGFFYTGPDGQQVADTDVGTAKEVPGESQTIQYRLNPDGVYSDGVPTSCDDLVLAWAARSGRFTRPGDVGPVPLFDAASTAGYEDIERIECLPGSKDATVVFRPDRRYLPWRNLFTAGELMPAHIAAQAANVPNVVSAMQSGDPSAIQRLADFWNSGWTLTPGELDPSRFPSSGPYRIESFTEDEGLVLVANGRWWGNKPETGRVVVWPKSTDLAAKVAEGAVSVIDIGTGSVPGLDLGGFSVQQVPGRGVEQLVLSTGGALGSVEARRAFASCVPRQALFDELGKVPEPPESGLGSAPLNSRIVQQDSLFYSAVTGAADPYRTVDVEGSKAALAAAGSPALTVRIGYQTPDDRRARTVAKIAESCKPAGITVVDAGAPDFRPAQLAAGAVDAVLGSTASVPGPAGSLDGVAATSALRTGSGLNFGRFGNGRYDAITDQLAADDNSTTRLNLLTEAESLLWAQLPSIPLFATPRTVAFGNGLQNGIAAPTQAGTGWNMDRWVLKR
>NC_016887.1|WP_014351801.1|3961911_3963102_-|protein-translocase-subunit-SecF
MSTSSPTLEPDAPNRAPAPRHSFFERLYTGTGGFEIVGRRRLFYTLSAIFLLLSILSIGLRGFTLGIDFAGGSRIQLPAGDTVTTQQVEDVYTETIGHEPVTVQKVGSGASATIQVRSETLNAEQTAALQSALFDEFQPKNADGEVTRNAISIAEISETWGSQITRQAVIALLVFVVLTMIYIAIRFERDMSIAAIASLFFNLIVTAGIYSLVGFEVTPAAVIGLLTILGFVLYDNVVVFDKVEENTRGVLHTTRRTYAEQANLAANQTLMRSINTTVIGILPIIGMLVIAVWLLGVGTLKDLALVQLVGMIVGAYSSIFFAVPVLVSIKERFGPVAAHTKKVLAKRSGAGAKAGAGARRAAPAGGRDTAETPRRTRDTGPRPGARPSGKRHRKNH
>NC_016887.1|WP_014351802.1|3963098_3964859_-|protein-translocase-subunit-SecD
MPPSQGSAHPFRLLGVYAALLAVIYALVFFTGDKSPTPKLGIDLQGGTRVTLTARTPDGSKPSQDSLKQAQGIIENRVNGLGVSGSEVVIDGDNLVITVPGDDSQQARSLATTAKLYIRPVLQAAPAPGSAPAPQPGQGTQPPATGTPGQAPAPTGAAPAPDGTAPESNGTAPAPATGQAPAPQNRVFPAQAPTEPSPSPEPAPPADQADLTPQERTQQEIAAAKALRQSEDPATQQAAMAAMDCSKPDPLAGNDDPTKPLVTCATDGSEVYLLGPSRIDGQEIKDATSGLNQQQARHEVTLEFKSSGSDAWADLTGEYVYKRVAFVLDSQVVSAPVVQQGPQQGGSTQISGNFTASSAKELANTLKYGSLPLSFQTSEAETVSATLGLSSLRAGLIAGAIGMIVVLLYCLLYYRMLGFLAGLSLVAAGVAVYGLIVLLGRWIGFTLDLAGIAGLIIGIGMTADSFVVFFERIKDEMREGRSFRSAVPRGWARAQRTNLSGKTVSLIAAVVLYILAAGQVKGFAFTLGLTTVLDVIVLYLVTAPLMMLASRSPYWAKPSVNGLGVIQQIARERGAGGPALVKETAR
>NC_016887.1|WP_014351803.1|3964968_3965325_-|preprotein-translocase-subunit-YajC
MELLFPLLLVALLVPMFLGVRRQKREAEKVAAMQDGLKVGDQVITTSGLYGTVVEVDDTTVDLEIAEEVVTTWLRQAIREVRVDDEAEATTGDTDADEAPGTTTEETAEQTETRLTKD
>NC_016887.1|WP_014351804.1|3965509_3967000_-|NAD(P)/FAD-dependent-oxidoreductase
MAPQFDAIVVGAGFGGMGAGIELDRLGLSNFVILEREDDLGGTWHVNRYPGLAVDIASVTYSYSFEPNPYWSRLFAPGAELKKYAEHVAGKYGLRRRMRFGTTVDGARWDEEDQQWVVSIAGGETLTARYLLAATGFLSQPYTPPFPGIDSFEGTILHTTAWDDSIDLTDRKAAVIGTGATGVQLVPEVAKKVRELTVFQRTPIWVVPKVDAPIPEPVQKLFAAAPVTQKAARLVNTSMLEALMVVGVLHFRQAKLMNKGAALLAKAHLRAQVRDPEIRKQLTPDYDFGCKRPTFSNHYFKTFNQPHVRLETNSIERIEPDGIVTADGHKTEIDTLILATGFNLWDVNFPAIEIIGRDGVNLGKFWRDNRFQAYEGITVPKFPNFLSLNSPYSYSGLSYFTTIEAQMKHMGRLFGELFRRGETTFEVTERANTEFLDRVTSKLDDSVFYGGSCSTARSYYFNQHGEAALLRPTSTINAHREAVSFPLDDYVYGRSA
>NC_016887.1|WP_048833493.1|3967036_3967702_+|TetR/AcrR-family-transcriptional-regulator
MTHHSVCDDSIIAGVTKPSTRAERRKAELRREIIDTAFVCFAEKGYHATGIADIATHLGIGHGTFYRYFSNKRDIIDHVIDDLAARIIEALGTENAPDAATSLDEYREQLDRIGTALTRILIEDRRVAQLLLFHATGIDDELTERLYGLLDTADMLTAGYLEHGVELGYLREDLDTVNTARAVTGMLMAGVVHGLREMDEAGIAALNEAIRRLLIEGVRKP
>NC_016887.1|WP_014351806.1|3967763_3968342_+|DivIVA-domain-containing-protein
MTAVTPEDVGRTTFALTPPGLRGYHTDEVDAFLELVAATLGGSGGLTADDLRQVSFGAPRGGRRGYRAEQVDEFLDRVHAELEYRQRGVRPVPAAAPGPAPARLLTPADVHRMRFTPAPLEQRGYHIEEVDAFLDLVAATLAHDGPGSLTVDDVRAVRFTVARLGVRGYQRDEVDAFLDLVITALQQPAGLR
>NC_016887.1|WP_014351807.1|3968376_3969453_-|Holliday-junction-branch-migration-DNA-helicase-RuvB
MEYDDEQSPVDAHFSSADGDIETSLRPKSLDDFIGQPRVREQLALVLRGARGRGGTPDHILLSGPPGLGKTSMAMIIAAELGTALRITSGPALERAGDLAAMLSNLVEGDVLFIDEIHRMARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLDIAPFTLVGATTRSGALTGPLRDRFGFTGHMDFYEPGELLGILQRSARILGVEIDHDAAAEIAGRSRGTPRIANRLLRRVRDYAEVRADGRITRPIAAAALEVYDVDVLGLDRLDRAVLGALVRGFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVRAGMIARTPRGRVATATAWEHLGLVPPPDLVFGSIEVRGREPHPTLDLFD

Crispr_ID: NC_016887_3

• CRISPR_ID: NC_016887_3
• CRISPR_location: 3958679-3959470
• CRISPR_type: Orphan
• Repeat_type: I-E:NA
• Spacer_info: 12 spacers

Consensus repeat of NC_016887_3

Consensus_repeat	Method
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	CRISPRCasFinder
GGGCTCANTCCCCGCGCGTGCGGGGAGCAC	CRT
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	PILER-CR

spacers of NC_016887_3

>3.1|3958708|66|NC_016887|CRISPRCasFinder
CCCTCGCCCTCAATGGGAGGACTCATCCCGCGCGCACCGACGGCGTCCGGGCAGCCCACCACCGCG
>3.2|3958803|32|NC_016887|CRISPRCasFinder
GCGAGCAATGTCATATACAGGCGGTCTGGCTT
>3.3|3958864|31|NC_016887|CRISPRCasFinder,CRT
CTGGTCCATGCCTCACAGCATCGCACACATT
>3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR
TCGACGTCGTCGATCATCGTGTCCGGCAGCAG
>3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR
GTCGGCCTCCCGCTCGCTGCGGCTGGCCGCGA
>3.6|3959046|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR
ATGGCGGTGATGACAGCGTGGCGGGCGTCGAG
>3.7|3959107|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR
TCGGGAGGCCCGCAGCCATACCCCGGTCAGTT
>3.8|3959168|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR
TGACACGGCCATCGAGTCGAGGACCGATGCCA
>3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR
CGACACCGCTGTCGGTGACGACCTTGCGGGTC
>3.10|3959290|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR
CGGATTCGCGAAACACAAGCCCGGATCGACTC
>3.11|3959351|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR
GGTGTGTCGCTGCTGTCGACGATGAGGTCCAC
>3.12|3959412|30|NC_016887|CRISPRCasFinder,CRT,PILER-CR
GACGGCACCAAGTTCTACTGCACCGGCTCG
>3.13|3958802|33|NC_016887|CRT
CGCGAGCAATGTCATATACAGGCGGTCTGGCTT

CRISPR arrays and Neighbor proteins around NC_016887_3

CRISPR arrays

The CRISPR arrays of NC_016887_3

>merge|NC_016887|3|3958679-3959470|CRISPRCasFinder,CRT,PILER-CR
CGGATCCTCCCGGCGCGAGCGAGGAGCACCCCTCGCCCTCAATGGGAGGACTCATCCCGCGCGCACCGACGGCGTCCGGGCAGCCCACCACCGCGGGCTCATCCCCCGCGCCTGCGGGAAGCACGCGAGCAATGTCATATACAGGCGGTCTGGCTTGGGCTCATCCCCGCACGTGTGGGAGCACGCTGGTCCATGCCTCACAGCATCGCACACATTGGGCTCATCCCCACGCGTGCGGGGAGCATTCGACGTCGTCGATCATCGTGTCCGGCAGCAGGGGCTCATCCCCGCGCGTGCGGGGAGCACGTCGGCCTCCCGCTCGCTGCGGCTGGCCGCGAGGGCTCATCCCCGCGCGTGCGGGGAGCACATGGCGGTGATGACAGCGTGGCGGGCGTCGAGGGGCTCATCCCCGCGCGTGCGGGGAGCACTCGGGAGGCCCGCAGCCATACCCCGGTCAGTTGGGCTCATCCCCGCGCGTGCGGGGAGCACTGACACGGCCATCGAGTCGAGGACCGATGCCAGGGCTCATCCCCGCGCGTGCGGGGAGCACCGACACCGCTGTCGGTGACGACCTTGCGGGTCGGGCTCATCCCCGCGCGTGCGGGGAGCACCGGATTCGCGAAACACAAGCCCGGATCGACTCGGGCTCATCCCCGCGCGTGCGGGGAGCACGGTGTGTCGCTGCTGTCGACGATGAGGTCCACGGGCTCATCCCCGCGCGTGCGGGGAGCACGACGGCACCAAGTTCTACTGCACCGGCTCGCTGCTCATCCCCGCGCGTGCGGGGAGCAC

>NC_016887|3|3|3958679-3959470|CRISPRCasFinder
CGGATCCTCCCGGCGCGAGCGAGGAGCAC	CCCTCGCCCTCAATGGGAGGACTCATCCCGCGCGCACCGACGGCGTCCGGGCAGCCCACCACCGCG
GGCTCATCCCCCGCGCCTGCGGGAAGCAC	GCGAGCAATGTCATATACAGGCGGTCTGGCTT
GGGCTCATCCCCGCACGTGTGGGAGCACG	CTGGTCCATGCCTCACAGCATCGCACACATT
GGGCTCATCCCCACGCGTGCGGGGAGCAT	TCGACGTCGTCGATCATCGTGTCCGGCAGCAG
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	GTCGGCCTCCCGCTCGCTGCGGCTGGCCGCGA
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	ATGGCGGTGATGACAGCGTGGCGGGCGTCGAG
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	TCGGGAGGCCCGCAGCCATACCCCGGTCAGTT
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	TGACACGGCCATCGAGTCGAGGACCGATGCCA
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	CGACACCGCTGTCGGTGACGACCTTGCGGGTC
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	CGGATTCGCGAAACACAAGCCCGGATCGACTC
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	GGTGTGTCGCTGCTGTCGACGATGAGGTCCAC
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	GACGGCACCAAGTTCTACTGCACCGGCTCG
CTGCTCATCCCCGCGCGTGCGGGGAGCAC

>NC_016887|3|2|3958773-3959470|CRT
GGGCTCATCCCCCGCGCCTGCGGGAAGCA	CGCGAGCAATGTCATATACAGGCGGTCTGGCTT
GGGCTCATCCCCGCACGTGTGGGAGCACG	CTGGTCCATGCCTCACAGCATCGCACACATT
GGGCTCATCCCCACGCGTGCGGGGAGCAT	TCGACGTCGTCGATCATCGTGTCCGGCAGCAG
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	GTCGGCCTCCCGCTCGCTGCGGCTGGCCGCGA
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	ATGGCGGTGATGACAGCGTGGCGGGCGTCGAG
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	TCGGGAGGCCCGCAGCCATACCCCGGTCAGTT
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	TGACACGGCCATCGAGTCGAGGACCGATGCCA
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	CGACACCGCTGTCGGTGACGACCTTGCGGGTC
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	CGGATTCGCGAAACACAAGCCCGGATCGACTC
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	GGTGTGTCGCTGCTGTCGACGATGAGGTCCAC
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	GACGGCACCAAGTTCTACTGCACCGGCTCG
CTGCTCATCCCCGCGCGTGCGGGGAGCAC

>NC_016887|3|2|3958895-3959470|PILER-CR
GGGCTCATCCCCACGCGTGCGGGGAGCAT	TCGACGTCGTCGATCATCGTGTCCGGCAGCAG
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	GTCGGCCTCCCGCTCGCTGCGGCTGGCCGCGA
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	ATGGCGGTGATGACAGCGTGGCGGGCGTCGAG
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	TCGGGAGGCCCGCAGCCATACCCCGGTCAGTT
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	TGACACGGCCATCGAGTCGAGGACCGATGCCA
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	CGACACCGCTGTCGGTGACGACCTTGCGGGTC
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	CGGATTCGCGAAACACAAGCCCGGATCGACTC
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	GGTGTGTCGCTGCTGTCGACGATGAGGTCCAC
GGGCTCATCCCCGCGCGTGCGGGGAGCAC	GACGGCACCAAGTTCTACTGCACCGGCTCG
CTGCTCATCCCCGCGCGTGCGGGGAGCAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_016887.1|WP_014351808.1|3969459_3970065_-|Holliday-junction-branch-migration-protein-RuvA	unknown	unknown	gnl|CDD|234645
NC_016887.1|WP_048833493.1|3967036_3967702_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NC_016887.1|WP_014351804.1|3965509_3967000_-|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224983
NC_016887.1|WP_014351803.1|3964968_3965325_-|preprotein-translocase-subunit-YajC	unknown	unknown	gnl|CDD|376903
NC_016887.1|WP_048833490.1|3947439_3948351_-|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_014351797.1|3955598_3955886_-|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_014351794.1|3950343_3952755_-|RelA/SpoT-family-protein	unknown	unknown	gnl|CDD|213552
NC_016887.1|WP_048833491.1|3948408_3950097_-|cutinase-family-protein	unknown	unknown	gnl|CDD|366455
NC_016887.1|WP_014351801.1|3961911_3963102_-|protein-translocase-subunit-SecF	unknown	unknown	gnl|CDD|237275
NC_016887.1|WP_014351806.1|3967763_3968342_+|DivIVA-domain-containing-protein	unknown	unknown	gnl|CDD|188337
NC_016887.1|WP_048833492.1|3960163_3961894_-|peptide-binding-protein	unknown	unknown	gnl|CDD|173866
NC_016887.1|WP_014351790.1|3945910_3946552_-|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_148280677.1|3953242_3953752_-|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_014351802.1|3963098_3964859_-|protein-translocase-subunit-SecD	unknown	unknown	gnl|CDD|235615
NC_016887.1|WP_014351796.1|3953748_3955599_-|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_014351798.1|3957121_3958585_+|ATP-binding-protein	unknown	unknown	gnl|CDD|224586
NC_016887.1|WP_014351807.1|3968376_3969453_-|Holliday-junction-branch-migration-DNA-helicase-RuvB	unknown	unknown	gnl|CDD|234619
NC_016887.1|WP_014351791.1|3946548_3947424_-|hypothetical-protein	unknown	unknown	gnl|CDD|349756
NC_016887.1|WP_014351789.1|3945509_3945914_-|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_014351799.1|3959552_3960125_-|adenine-phosphoribosyltransferase	unknown	unknown	gnl|CDD|235028

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_016887.1|WP_014351808.1|3969459_3970065_-|Holliday-junction-branch-migration-protein-RuvA	gnl|CDD|234645	PRK00116, ruvA, Holliday junction branch migration protein RuvA.	7.98827e-78
NC_016887.1|WP_014351803.1|3964968_3965325_-|preprotein-translocase-subunit-YajC	gnl|CDD|376903	pfam02699, YajC, Preprotein translocase subunit. See.	1.40595e-27
NC_016887.1|WP_014351804.1|3965509_3967000_-|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|224983	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].	2.98122e-97
NC_016887.1|WP_014351794.1|3950343_3952755_-|RelA/SpoT-family-protein	gnl|CDD|213552	TIGR00691, PppGpp_synthetase., (p)ppGpp synthetase, RelA/SpoT family. The functions of E. coli RelA and SpoT differ somewhat. RelA (EC 2.7.6.5) produces pppGpp (or ppGpp) from ATP and GTP (or GDP). SpoT (EC 3.1.7.2) degrades ppGpp, but may also act as a secondary ppGpp synthetase. The two proteins are strongly similar. In many species, a single homolog to SpoT and RelA appears reponsible for both ppGpp synthesis and ppGpp degradation. (p)ppGpp is a regulatory metabolite of the stringent response, but appears also to be involved in antibiotic biosynthesis in some species. [Cellular processes, Adaptations to atypical conditions].	0
NC_016887.1|WP_048833491.1|3948408_3950097_-|cutinase-family-protein	gnl|CDD|366455	pfam01083, Cutinase, Cutinase.	2.58745e-08
NC_016887.1|WP_014351801.1|3961911_3963102_-|protein-translocase-subunit-SecF	gnl|CDD|237275	PRK13022, secF, protein translocase subunit SecF.	2.23027e-105
NC_016887.1|WP_048833492.1|3960163_3961894_-|peptide-binding-protein	gnl|CDD|173866	cd08501, PBP2_Lpqw, The substrate-binding domain of mycobacterial lipoprotein Lpqw contains type 2 periplasmic binding fold. LpqW is one of key players in synthesis and transport of the unique components of the mycobacterial cell wall which is a complex structure rich in two related lipoglycans, the phosphatidylinositol mannosides (PIMs) and lipoarabinomannans (LAMs). Lpqw is a highly conserved lipoprotein that transport intermediates from a pathway for mature PIMs production into a pathway for LAMs biosynthesis, thus controlling the relative abundance of these two essential components of cell wall. LpqW is thought to have been adapted by the cell-wall biosynthesis machinery of mycobacteria and other closely related pathogens, evolving to play an important role in PIMs/LAMs biosynthesis. Most of periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the LpqW protein. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.0384e-66
NC_016887.1|WP_014351799.1|3959552_3960125_-|adenine-phosphoribosyltransferase	gnl|CDD|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	1.66914e-70
NC_016887.1|WP_014351806.1|3967763_3968342_+|DivIVA-domain-containing-protein	gnl|CDD|188337	TIGR03543, divI1A_rptt_fam, DivIVA domain repeat protein. Members of this protein family contain two full and two partial repeats of a domain found at the N-terminus of Bacillus subtilis cell-division initiation protein DivIVA. The portion repeated four times in these proteins includes the motif GYxxxxVD.	8.3946e-18
NC_016887.1|WP_014351802.1|3963098_3964859_-|protein-translocase-subunit-SecD	gnl|CDD|235615	PRK05812, secD, preprotein translocase subunit SecD; Reviewed.	5.13485e-118
NC_016887.1|WP_014351798.1|3957121_3958585_+|ATP-binding-protein	gnl|CDD|224586	COG1672, COG1672, Predicted ATPase (AAA+ superfamily) [General function prediction only].	3.61837e-11
NC_016887.1|WP_014351807.1|3968376_3969453_-|Holliday-junction-branch-migration-DNA-helicase-RuvB	gnl|CDD|234619	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB.	0
NC_016887.1|WP_014351791.1|3946548_3947424_-|hypothetical-protein	gnl|CDD|349756	cd02036, MinD, septum site-determining protein MinD. Septum site-determining protein MinD is part of the operon MinCDE that determines the site of the formation of a septum at mid-cell, an important part of bacterial cell division. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein.	0.000467957
NC_016887.1|WP_048833493.1|3967036_3967702_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.78097e-13

Protein sequences

>NC_016887.1|WP_014351798.1|3957121_3958585_+|ATP-binding-protein
MDKPVDMFDRDHEWSALSRFVSDDRAGATLGVVSGRRRQGKTFLLEAMCQAAGGFYFGATEAADAESLRRISSALTEHLRPASPFHFAHWAEVIDALLGLGDKGPVPVVIDEFPYLAKANPELPSIIQEAFRPLRGQRATSRTRLLLCGSALSFMGKLLSGSAPLRGRAGLELLVRPLDYRLAAQFWDITDPLLAVRVNAIVGGTPAYRREFARGDVPADAADFDSWVERTVLNPETPLFREPRYLLAEEPDLRDAGLYLSVLGAVANGNATRGGIAGYLERRAADLTHPINVLEDVGLLRRDADVFRQNRSAYRITEPLVAFYHAIMRPVWDQLERPGSAHRVWRASRHRFTSNVLGPHFEQICREWSLHHADPELFGELPARVGHGLVHDPATRTNHEIDVAVIGLSDGGKPPLLAIGEAKWNDTMGQAHIDRLRHIRTLIEKTGRYDTRRTRLILFSGAGFNGKATDAAADSDISLIGLPELYG
>NC_016887.1|WP_014351797.1|3955598_3955886_-|hypothetical-protein
MTLGVEPDQIKAMATSWRQEADEVGKLAWSAMAEATGEGSSVLAAVRGAADPAKQAMTSIATRYTTLADLLDKFAVDVEAKDAEIGAEIGKLSPR
>NC_016887.1|WP_014351796.1|3953748_3955599_-|hypothetical-protein
MRPTISQLEGWNIEGLHNAAEAARKNADILFTSVNDASRAMSAAGEWHGQTKDAAGRRIDEEVDHGYEVRNVLLRIADDAEDAYQGMKHARAYVLDQKKHAVDAGFTVHDDGKVTHDDPEKEGDAGVIQINISSGLDELERLDNQYGTTLNDALTDLGAMRDGQQDITMPDGTQLDPDALVTQLASMSPDQRATVIAGLSPEAQRQLVIAAPEKLGNMNGVPFTMRIDANEINIRNALTTEKQKPEQDQDKDRINQLEAMLAPMPNPHGAGVLNSEPQATGADGTPRRDMVDRKYVMFSTEGNGRMIEMVGEMKADAPGVGVYVPGTSTNLNDSSPNHTAAWNLADQTGGPIFLYMEGDFPQSLASPTDGAPSPKFAAEMAPKLVDFGREVDREVAAHSPGTPVSYVGHSYGGSIVGSAEQLGLRADRVIHASSAGTGVFEGNWNNPNPNVQRYSMTAPGDIIGVVQSYPDEGLRLPGGIQTPGNPHAGNPLGGDPDEIPGVTRLDTGYYGTEFDGHKAGEVVFGPDGHGKYWDDPKSDAFKNIVGVIKGTEVTEYVERGIETSWVDVGLGDDGNGGKEAFDAGKAATAGKMFDVDPYSNPHVTDNPERGQTIDVK
>NC_016887.1|WP_148280677.1|3953242_3953752_-|hypothetical-protein
MRTTLCALGAASLLLLAVGCGSVIDEGPTNDDIKNTTGLTVEQAARVVYDNLNLVWPNPVEPRLDQVGKIGCRTNPNSMRSEGPPWQVEKKMVKEDPSPELVEQVRANLDSLTERGFVLEDFTIIDDHPLDRVYTNGDGYVIQSSMEIDRRVTDIPILEVASRSPCAAE
>NC_016887.1|WP_014351794.1|3950343_3952755_-|RelA/SpoT-family-protein
MTQHLGEANVEQSAASRPGGVPATSSDGAAGQSAKPANPGPNPEVVRQSAAVPTSASRRVRARLARRMTGQRGIAAVKPVLEPLATVHRELYPKANLTLLQRAFDVADERHAKQFRKSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYSLEQLTADFGAEVAHLVDGVTKLDKVNLGAAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPPEKQAKKAKETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYDEIVRLVADRAPSRDTYLAKVRAEIVNTLAASRINAIVEGRPKHYWSIYQKMIVKGKDFDDIHDLVGIRILCDEVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPDGKPLEVQIRTQDMHRTAEFGIAAHWRYKETRGKHSSDTAEVDDMAWMRQLLDWQREAADPAEFLESLRFDLKAPEIFVFTPKGDVITLPQKSTPVDFAYAVHTEVGHRCIGARVNGRLVALERQLENGEVVEVFTSKAQNAGPSRDWQSFVVSPRAKAKIRQWFAKERREEALESGKEQINKEVRRVGLPLQRLMNVDAMNAVAKELHYTDISTLYTAVGEHQVSAHHVVQRLMAQLGGIGDVENELAERSTPSTVPSRQRVSGDAGVLIPGAEGTVAKLAKCCTPVPGDEIMGFVTRGGAVSVHRVDCTNAGSLQAQSERIIEVEWAPSPSSVFLVAIQIEALDRTRLLSDVTKVLADEKVNILSASVATHGDRVAISKFTFEMGDPKHLGHILNVVRNVEGVYDVYRVTSAA
>NC_016887.1|WP_048833491.1|3948408_3950097_-|cutinase-family-protein
MAGCTTRLSGVLVALAVAVSTATAGTVAGGAASAQAPNVAGPSTNLPIDSCPALYALGIQGTGQSSPDAAPTTDTGMLSTVFMPMMAKAPDDGLVDRAYVPYESGFGGATGGGVVPYSESVAGGLSRLRSMASSVAERCPETRFGIVGYSQGAHVASIFAQEVGQGSGVLPPEKVAAVALFADPTRNPGAPLFPGAPGKATPDAAPGTEGEELARIVALPQVPASGGGIGPERDKAENFGALTGRVASFCAAGDLACDAPEGAPILKAVANIAGQAKLSGGDPIASLVSVAQALAYTSIKTATKVVNEDIQGNSLASLSLSPKKSISQRLAEAADPRTPLDIPAALRALLKVGMIGLNAVVTVVRTVLNPAALADLATAGLSNPPAALVSLGTKLVGAVPQLIPPTTGVRLVNQAFDAVVQNITDNKELLNTTTWVRYWDTVQRHGAYGTATVSADGDAPTTFVAEWFAAVARDLAGTFGSDTAPLPGSETAREGPSTPAPGFAEPGPGASTSPDQSGTGQFPFGTGVDGASFGGATADRTIEPIATTERPDTSTTYPFSTN
>NC_016887.1|WP_048833490.1|3947439_3948351_-|hypothetical-protein
MLKSYKQLNRWYGALEPETGSSAPARPAEESAPIADEDDGPARYPDYIPDEQPVAPPEPPVRRSEFTGGWSDWVADRAPGPDDDYTPRNGDVVRFPWPDDDPEEVAEPVRLRAARDLRTAGKSSGGGRARALVVLIATVLLLAAAAAGVLYLLGDSGERRAGDETAVQFTAGSFESTAGPAQRCPTERTDEVVRSAEAGGTDSGPDAILRFQYAYYVDRSAVLAREVVAPGAPVSPASVIQRGIDSIAAGTTHCVRIVTLDQGRYSVEVTEYRPDGQPATYSKQMVTTAVIGGRTLITGITAG
>NC_016887.1|WP_014351791.1|3946548_3947424_-|hypothetical-protein
MGDDWSRWLDDAPDADAPSDRSGRRKAPVVRLRGEHGSARGARAGHRPVLVVGGCGGAGTTTTALGLAGELALSGAQTVAVDATAAGSDLGLRGADEHLHPISLQSWLYGRGGDEPAPLKECLSRSTSGFGLLWRDAAPLRRRASYLTVARAIDDAGYTAVYDGGHPIAGRQLRPLLDDADVALVLAIPARTDAANRLRVTLEWLDDEFGDSADGPGSGIVGDTTIVISHQQPGVDSRVADHLREHLSGWVRDIVEIPYDAHLARGELVRHISLDDKTRRAYGSLLAGVAS
>NC_016887.1|WP_014351790.1|3945910_3946552_-|hypothetical-protein
MTAAMNLRRRRPEPAPAGVIAPPESRRAPIWDRPVPGAGRAPLVWLLGVHGGAGASSLAHVLAPAADSGRRWPGVFDRESPFVVLVCRETIAGLTRAHDLLRQHHAGFAGPSEVLGLITVAARPGRMPAEIRRYREVVGSLAGRMWQVPWYEEWTLVEPEKLPVWAPGVEPPLKKRRIDPLDEVPLELRELGTEIVAAAREAIADEANEEGAL
>NC_016887.1|WP_014351789.1|3945509_3945914_-|hypothetical-protein
MSTMLALHEGAQAILAQVGNPTPEAPPAADAGLQASRWGFWALVIGLPLAAIGVVAFVLVRVSNSDRRHVPAPHGWAAQGQPPGWNVPGPHSVPLPGPAPSGWNQQPGAWGPNGAGTGQPGWDRPPLTTNPPGH
>NC_016887.1|WP_014351799.1|3959552_3960125_-|adenine-phosphoribosyltransferase
MSKHAAIESDDAVAERTSKAAQLVERMTRWCDDFPEPGVRFADLTPVFADPEGFRTVIDCLAASAPDADLVAAVDARGFLLGAGVAATLGTGVIAVRKAGKLPPPVVTREYDLEYGKAALEIPADGVALTGRRVLLLDDVLATGGTLAAAADLFTQAGAEIVAAAVVLELESLGGRKRQGSYPLTAIVTV
>NC_016887.1|WP_048833492.1|3960163_3961894_-|peptide-binding-protein
MREPRGFRRRPHRLLAAAAAAAVAAGLVAGCSSESQVPSIGFAVDAAVASYNGGSTLGASTGATAVFGRVLTGFFYTGPDGQQVADTDVGTAKEVPGESQTIQYRLNPDGVYSDGVPTSCDDLVLAWAARSGRFTRPGDVGPVPLFDAASTAGYEDIERIECLPGSKDATVVFRPDRRYLPWRNLFTAGELMPAHIAAQAANVPNVVSAMQSGDPSAIQRLADFWNSGWTLTPGELDPSRFPSSGPYRIESFTEDEGLVLVANGRWWGNKPETGRVVVWPKSTDLAAKVAEGAVSVIDIGTGSVPGLDLGGFSVQQVPGRGVEQLVLSTGGALGSVEARRAFASCVPRQALFDELGKVPEPPESGLGSAPLNSRIVQQDSLFYSAVTGAADPYRTVDVEGSKAALAAAGSPALTVRIGYQTPDDRRARTVAKIAESCKPAGITVVDAGAPDFRPAQLAAGAVDAVLGSTASVPGPAGSLDGVAATSALRTGSGLNFGRFGNGRYDAITDQLAADDNSTTRLNLLTEAESLLWAQLPSIPLFATPRTVAFGNGLQNGIAAPTQAGTGWNMDRWVLKR
>NC_016887.1|WP_014351801.1|3961911_3963102_-|protein-translocase-subunit-SecF
MSTSSPTLEPDAPNRAPAPRHSFFERLYTGTGGFEIVGRRRLFYTLSAIFLLLSILSIGLRGFTLGIDFAGGSRIQLPAGDTVTTQQVEDVYTETIGHEPVTVQKVGSGASATIQVRSETLNAEQTAALQSALFDEFQPKNADGEVTRNAISIAEISETWGSQITRQAVIALLVFVVLTMIYIAIRFERDMSIAAIASLFFNLIVTAGIYSLVGFEVTPAAVIGLLTILGFVLYDNVVVFDKVEENTRGVLHTTRRTYAEQANLAANQTLMRSINTTVIGILPIIGMLVIAVWLLGVGTLKDLALVQLVGMIVGAYSSIFFAVPVLVSIKERFGPVAAHTKKVLAKRSGAGAKAGAGARRAAPAGGRDTAETPRRTRDTGPRPGARPSGKRHRKNH
>NC_016887.1|WP_014351802.1|3963098_3964859_-|protein-translocase-subunit-SecD
MPPSQGSAHPFRLLGVYAALLAVIYALVFFTGDKSPTPKLGIDLQGGTRVTLTARTPDGSKPSQDSLKQAQGIIENRVNGLGVSGSEVVIDGDNLVITVPGDDSQQARSLATTAKLYIRPVLQAAPAPGSAPAPQPGQGTQPPATGTPGQAPAPTGAAPAPDGTAPESNGTAPAPATGQAPAPQNRVFPAQAPTEPSPSPEPAPPADQADLTPQERTQQEIAAAKALRQSEDPATQQAAMAAMDCSKPDPLAGNDDPTKPLVTCATDGSEVYLLGPSRIDGQEIKDATSGLNQQQARHEVTLEFKSSGSDAWADLTGEYVYKRVAFVLDSQVVSAPVVQQGPQQGGSTQISGNFTASSAKELANTLKYGSLPLSFQTSEAETVSATLGLSSLRAGLIAGAIGMIVVLLYCLLYYRMLGFLAGLSLVAAGVAVYGLIVLLGRWIGFTLDLAGIAGLIIGIGMTADSFVVFFERIKDEMREGRSFRSAVPRGWARAQRTNLSGKTVSLIAAVVLYILAAGQVKGFAFTLGLTTVLDVIVLYLVTAPLMMLASRSPYWAKPSVNGLGVIQQIARERGAGGPALVKETAR
>NC_016887.1|WP_014351803.1|3964968_3965325_-|preprotein-translocase-subunit-YajC
MELLFPLLLVALLVPMFLGVRRQKREAEKVAAMQDGLKVGDQVITTSGLYGTVVEVDDTTVDLEIAEEVVTTWLRQAIREVRVDDEAEATTGDTDADEAPGTTTEETAEQTETRLTKD
>NC_016887.1|WP_014351804.1|3965509_3967000_-|NAD(P)/FAD-dependent-oxidoreductase
MAPQFDAIVVGAGFGGMGAGIELDRLGLSNFVILEREDDLGGTWHVNRYPGLAVDIASVTYSYSFEPNPYWSRLFAPGAELKKYAEHVAGKYGLRRRMRFGTTVDGARWDEEDQQWVVSIAGGETLTARYLLAATGFLSQPYTPPFPGIDSFEGTILHTTAWDDSIDLTDRKAAVIGTGATGVQLVPEVAKKVRELTVFQRTPIWVVPKVDAPIPEPVQKLFAAAPVTQKAARLVNTSMLEALMVVGVLHFRQAKLMNKGAALLAKAHLRAQVRDPEIRKQLTPDYDFGCKRPTFSNHYFKTFNQPHVRLETNSIERIEPDGIVTADGHKTEIDTLILATGFNLWDVNFPAIEIIGRDGVNLGKFWRDNRFQAYEGITVPKFPNFLSLNSPYSYSGLSYFTTIEAQMKHMGRLFGELFRRGETTFEVTERANTEFLDRVTSKLDDSVFYGGSCSTARSYYFNQHGEAALLRPTSTINAHREAVSFPLDDYVYGRSA
>NC_016887.1|WP_048833493.1|3967036_3967702_+|TetR/AcrR-family-transcriptional-regulator
MTHHSVCDDSIIAGVTKPSTRAERRKAELRREIIDTAFVCFAEKGYHATGIADIATHLGIGHGTFYRYFSNKRDIIDHVIDDLAARIIEALGTENAPDAATSLDEYREQLDRIGTALTRILIEDRRVAQLLLFHATGIDDELTERLYGLLDTADMLTAGYLEHGVELGYLREDLDTVNTARAVTGMLMAGVVHGLREMDEAGIAALNEAIRRLLIEGVRKP
>NC_016887.1|WP_014351806.1|3967763_3968342_+|DivIVA-domain-containing-protein
MTAVTPEDVGRTTFALTPPGLRGYHTDEVDAFLELVAATLGGSGGLTADDLRQVSFGAPRGGRRGYRAEQVDEFLDRVHAELEYRQRGVRPVPAAAPGPAPARLLTPADVHRMRFTPAPLEQRGYHIEEVDAFLDLVAATLAHDGPGSLTVDDVRAVRFTVARLGVRGYQRDEVDAFLDLVITALQQPAGLR
>NC_016887.1|WP_014351807.1|3968376_3969453_-|Holliday-junction-branch-migration-DNA-helicase-RuvB
MEYDDEQSPVDAHFSSADGDIETSLRPKSLDDFIGQPRVREQLALVLRGARGRGGTPDHILLSGPPGLGKTSMAMIIAAELGTALRITSGPALERAGDLAAMLSNLVEGDVLFIDEIHRMARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLDIAPFTLVGATTRSGALTGPLRDRFGFTGHMDFYEPGELLGILQRSARILGVEIDHDAAAEIAGRSRGTPRIANRLLRRVRDYAEVRADGRITRPIAAAALEVYDVDVLGLDRLDRAVLGALVRGFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVRAGMIARTPRGRVATATAWEHLGLVPPPDLVFGSIEVRGREPHPTLDLFD
>NC_016887.1|WP_014351808.1|3969459_3970065_-|Holliday-junction-branch-migration-protein-RuvA
MIASVRGEVVEIALDHVVVEAAGVGYRLNATPATLSGLTRGEQARLYTAMIVREDSMTLYGFADTEARDLFGLLQTVSGVGPRLAMAVLAVLEPEALRKALAESNVAALTRVPGIGKRGAERMVVELRDKVNLVPVQSGPPGSTPAAVVTPVRDQVVEALTGLGFPLKQAESAVDTVLADDPAATTSVALRAALGLLGKNR

Crispr_ID: NC_016887_4

• CRISPR_ID: NC_016887_4
• CRISPR_location: 4036123-4036238
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_016887_4

Consensus_repeat	Method
GCCAAGAAAGCCGCCGCCAAGAAGGC	CRISPRCasFinder

spacers of NC_016887_4

>4.1|4036149|19|NC_016887|CRISPRCasFinder
TCCTGCCAAGAAAGCCGCC
>4.2|4036194|19|NC_016887|CRISPRCasFinder
CGCCGCGAAGAAGGCTCCG

CRISPR arrays and Neighbor proteins around NC_016887_4

CRISPR arrays

The CRISPR arrays of NC_016887_4

>merge|NC_016887|4|4036123-4036238|CRISPRCasFinder
GTTCGCAAGGCTGCCGCCAAGAAGGCTCCTGCCAAGAAAGCCGCCGCCAAGAAGGCTCCGGCCAAGAAAGCCGCCGCGAAGAAGGCTCCGGCCAAGAAGGCCGCCGCCAAGAAGGC

>NC_016887|4|4|4036123-4036238|CRISPRCasFinder
GTTCGCAAGGCTGCCGCCAAGAAGGC	TCCTGCCAAGAAAGCCGCC
GCCAAGAAGGCTCCGGCCAAGAAAGC	CGCCGCGAAGAAGGCTCCG
GCCAAGAAGGCCGCCGCCAAGAAGGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_016887.1|WP_148280682.1|4033070_4033349_-|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_014351876.1|4037477_4038254_-|hypothetical-protein	unknown	unknown	gnl|CDD|225837
NC_016887.1|WP_048833502.1|4029222_4029627_-|OB-fold-nucleic-acid-binding-domain-containing-protein	unknown	unknown	gnl|CDD|239934
NC_016887.1|WP_014351879.1|4041224_4042376_-|cation:proton-antiporter	unknown	unknown	gnl|CDD|223551
NC_016887.1|WP_014351878.1|4039723_4041145_-|ethanolamine-ammonia-lyase-subunit-EutB	unknown	unknown	gnl|CDD|237897
NC_016887.1|WP_175587096.1|4032053_4032569_+|DUF3093-family-protein	unknown	unknown	gnl|CDD|378627
NC_016887.1|WP_048833503.1|4031478_4031979_-|dUTP-diphosphatase	unknown	unknown	gnl|CDD|234802
NC_016887.1|WP_014351867.1|4029751_4030447_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NC_016887.1|WP_014351883.1|4044960_4045320_-|DUF952-domain-containing-protein	unknown	unknown	gnl|CDD|377607
NC_016887.1|WP_014351874.1|4035118_4035877_+|ROK-family-protein	unknown	unknown	gnl|CDD|224851
NC_016887.1|WP_048833504.1|4042380_4042863_-|cation:proton-antiporter-regulatory-subunit	unknown	unknown	gnl|CDD|223564
NC_016887.1|WP_048834264.1|4033332_4034010_+|envelope-integrity-protein-Cei	unknown	unknown	gnl|CDD|379163
NC_016887.1|WP_014351885.1|4046776_4048534_+|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|223627
NC_016887.1|WP_148280683.1|4043087_4044302_+|two-component-sensor-histidine-kinase	unknown	unknown	gnl|CDD|226951
NC_016887.1|WP_014351884.1|4045890_4046646_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|367243
NC_016887.1|WP_081505602.1|4038791_4039343_-|ethanolamine-ammonia-lyase-light-chain-EutC	unknown	unknown	gnl|CDD|235482
NC_016887.1|WP_086008270.1|4030529_4031330_-|DUF3710-domain-containing-protein	unknown	unknown	gnl|CDD|378867
NC_016887.1|WP_014351871.1|4032656_4032959_-|DUF4193-domain-containing-protein	unknown	unknown	gnl|CDD|379391
NC_016887.1|WP_014351882.1|4044298_4044946_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NC_016887.1|WP_014351873.1|4034019_4034949_-|inositol-monophosphatase	unknown	unknown	gnl|CDD|238817

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_016887.1|WP_014351871.1|4032656_4032959_-|DUF4193-domain-containing-protein	gnl|CDD|379391	pfam13834, DUF4193, Domain of unknown function (DUF4193). This domain of unknown function contains four conserved cysteines and a conserved histidine, including a CXXXXH motif.	4.43803e-56
NC_016887.1|WP_014351876.1|4037477_4038254_-|hypothetical-protein	gnl|CDD|225837	COG3300, COG3300, MHYT domain (predicted integral membrane sensor domain) [Signal transduction mechanisms].	1.00873e-30
NC_016887.1|WP_086008270.1|4030529_4031330_-|DUF3710-domain-containing-protein	gnl|CDD|378867	pfam12502, DUF3710, Protein of unknown function (DUF3710). This family of proteins is found in bacteria. Proteins in this family are typically between 237 and 284 amino acids in length. There are two conserved sequence motifs: DLG and DGPRW.	3.01843e-65
NC_016887.1|WP_048833504.1|4042380_4042863_-|cation:proton-antiporter-regulatory-subunit	gnl|CDD|223564	COG0490, COG0490, Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels [Inorganic ion transport and metabolism].	3.68635e-48
NC_016887.1|WP_014351878.1|4039723_4041145_-|ethanolamine-ammonia-lyase-subunit-EutB	gnl|CDD|237897	PRK15067, PRK15067, ethanolamine ammonia-lyase subunit EutB.	0
NC_016887.1|WP_175587096.1|4032053_4032569_+|DUF3093-family-protein	gnl|CDD|378627	pfam11292, DUF3093, Protein of unknown function (DUF3093). This family of proteins with unknown function appears to be restricted to Actinobacteria. Some members are annotated as alanine rich membrane proteins however this cannot be confirmed.	5.10517e-52
NC_016887.1|WP_048833503.1|4031478_4031979_-|dUTP-diphosphatase	gnl|CDD|234802	PRK00601, dut, dUTP diphosphatase.	2.98315e-70
NC_016887.1|WP_014351867.1|4029751_4030447_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	8.78535e-05
NC_016887.1|WP_014351883.1|4044960_4045320_-|DUF952-domain-containing-protein	gnl|CDD|377607	pfam06108, DUF952, Protein of unknown function (DUF952). This family consists of several hypothetical bacterial and plant proteins of unknown function.	2.78691e-39
NC_016887.1|WP_014351874.1|4035118_4035877_+|ROK-family-protein	gnl|CDD|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	1.17536e-27
NC_016887.1|WP_014351884.1|4045890_4046646_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|367243	pfam02909, TetR_C, Tetracyclin repressor, C-terminal all-alpha domain.	1.11451e-10
NC_016887.1|WP_048834264.1|4033332_4034010_+|envelope-integrity-protein-Cei	gnl|CDD|379163	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator. This family appears at the C-terminus of members of the LytR_cpsA_psr, pfam03816, family.	2.42872e-11
NC_016887.1|WP_014351885.1|4046776_4048534_+|DEAD/DEAH-box-helicase	gnl|CDD|223627	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair].	7.85087e-102
NC_016887.1|WP_148280683.1|4043087_4044302_+|two-component-sensor-histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	6.79676e-31
NC_016887.1|WP_081505602.1|4038791_4039343_-|ethanolamine-ammonia-lyase-light-chain-EutC	gnl|CDD|235482	PRK05465, PRK05465, ethanolamine ammonia-lyase subunit EutC.	1.83234e-67
NC_016887.1|WP_048833502.1|4029222_4029627_-|OB-fold-nucleic-acid-binding-domain-containing-protein	gnl|CDD|239934	cd04488, RecG_wedge_OBF, RecG_wedge_OBF: A subfamily of OB folds corresponding to the OB fold found in the N-terminal (wedge) domain of Escherichia coli RecG. RecG is a branched-DNA-specific helicase, which catalyzes the interconversion of a DNA replication fork to a four-stranded (Holliday) junction in vivo and in vitro. This interconversion provides a route to repair stalled forks. The RecG monomer contains three domains. The N-terminal domain is named for its wedge structure, and may provide the specificity of RecG for binding branched-DNA structures. During the reversal of fork to Holliday junction, the wedge domain is fixed at the junction of the fork where the leading and lagging strand duplex arms meet, and is thought to promote the unwinding of the nascent leading and lagging strands. In order to form the Holliday junction, these nascent strands would be annealed, and the parental strands reannealed. The wedge domain may also be a processivity factor of RecG on these branched chain substrates.	3.03771e-11
NC_016887.1|WP_014351879.1|4041224_4042376_-|cation:proton-antiporter	gnl|CDD|223551	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	1.45277e-47
NC_016887.1|WP_014351882.1|4044298_4044946_+|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	9.682e-71
NC_016887.1|WP_014351873.1|4034019_4034949_-|inositol-monophosphatase	gnl|CDD|238817	cd01639, IMPase, IMPase, inositol monophosphatase and related domains. A family of Mg++ dependent phosphatases, inhibited by lithium, many of which may act on inositol monophosphate substrate. They dephosphorylate inositol phosphate to generate inositol, which may be recycled into inositol lipids; in eukaryotes IMPase plays a vital role in intracellular signaling. IMPase is one of the proposed targets of Li+ therapy in manic-depressive illness. This family contains some bacterial members of the inositol monophosphatase family classified as SuhB-like. E. coli SuhB has been suggested to participate in posstranscriptional control of gene expression, and its inositol monophosphatase activity doesn't appear to be sufficient for its cellular function. It has been proposed, that SuhB plays a role in the biosynthesis of phosphatidylinositol in mycobacteria.	5.13677e-77

Protein sequences

>NC_016887.1|WP_014351874.1|4035118_4035877_+|ROK-family-protein
MSARGHAFGIDIGGSGVKGAAVDLATGELVHQRIKIATPQPATPHAVAETVADLVAQAGWDGPVGITLPCVVLDGVARSAANVDPAWIGTDARTLFSAALGGRAVTVLNDADAAGMAEDRYGAAKDFDGLVLLLTFGTGIGSAVLYNGTLVPNSELGHVEIGGMEAEHRAAASIKDRDGLSYQQWAVQVSTVLIGLENLFWPKVFVAGGGISRDAAQWIPLLTNRTPVIPANLKNTAGIVGAAMAIDAGVAP
>NC_016887.1|WP_014351873.1|4034019_4034949_-|inositol-monophosphatase
MECVPHSPTSPQPTAPTSANSADSAPDAAELRRIAVRLAEAAAAHVRTRRPEVFGPGGSVDGAVQAKSTPTDPVTVVDTETEQLIRTTLARLRPGDHILGEEGGGDLARADDHTVVWVVDPIDGTVNFLYGIPAYAVSVAAMRAGRSIAGAVVDVAAGQTYHAGLGLGAERVDADGTTHPLRCNPVEEVRMALVATGFGYNAARRARQAALVAEVLPRVRDIRRIGAAALDLCMVAEGRVDAHYEHGLNPWDWAAGALIATEAGARVQAPPAHSTGAAGELFVAAAPAIADELLALLDELGVSAPIPEP
>NC_016887.1|WP_048834264.1|4033332_4034010_+|envelope-integrity-protein-Cei
MVSLITEGSATDSRGRPFIRRRLQPWLVLVAVLALICTIVWIKALTTEDTDYTAMACNSPSPATDPGAEPQPALGQRVGPSRLENVEPAALADTKVRVLNANNQRGQAAHAAAQLGDLGFGSVPNEAYGNDSIYVNGDLECMGQIRFGVNGRRAAASVQLAVPCAELIEDKREDDTVDLVLGSLFRDIQPSNDAEEVLRSLKNPASGETPALDIDLLEAARQARC
>NC_016887.1|WP_148280682.1|4033070_4033349_-|hypothetical-protein
MISETTSTLYENVRANLAAAVPTVSIRDSDGVDSLTVSTRLCFDCDFCLGVRYCLAAQIETPARKSVVGRGNKQGMFSVVRLLSGAELQNLP
>NC_016887.1|WP_014351871.1|4032656_4032959_-|DUF4193-domain-containing-protein
MATDYDAPRRTESDDVSEDSLEELKARRNEAQSAVVDIDESDTAESFELPGADLSEEVLTVRVIPKQADEFTCSSCFLVHHRSRLASDKGGQMICMDCAA
>NC_016887.1|WP_175587096.1|4032053_4032569_+|DUF3093-family-protein
MSDQPVPADTQRVTRPGAPAYTERLWVPLWWWPVAFAIAGLLAAEIHMGAPGLRAWLPYVLLFPVPVWVLLWLSRHRVAVATDAEGKPELRVDRAHLPVEFIARAAVVPASAKSAALGRQLDPAAYVQHRPWIGSMVLLVLDDPDDPTPYWLISTRRPERVLAALGLPSAQ
>NC_016887.1|WP_048833503.1|4031478_4031979_-|dUTP-diphosphatase
MSALSPIPLLRLDPGIPVPTRAHPGDAGVDLCTTEDVILEPGERVLVGTGIAVALPVGTVGLIHPRSGLAAKTGLSVVNTPGTVDAGYRGEIKVCLINHDPRTRIELRRGDRIAQLLVQRVELVDFVEVDRLDETTRGAGGYGSSGGHASLAATADAASPAPGKEE
>NC_016887.1|WP_086008270.1|4030529_4031330_-|DUF3710-domain-containing-protein
MDEQDYDDDSDYRRAEHAADDAEPPRTGPYDYEDVAELLESVADQRLDLGSVILPVPPGGQLQVEMTPEGTPQAVHLATEHGRITVAAYAAPKSPGQWRTVASDLADSLRKDGAKVAIETGPWGREIFAVTEGADLRFIGVDGYRWMVRLVAAGPSGAADADTPLVDAARAILSETVIRRGTDPLPVREPLPVVLPQELADQLAAAHQQQIQAQQQAIAAQQQAMAAQQGTPGVVPGIAPSAGRPVMPDQPRRGADGSAMQQLGRN
>NC_016887.1|WP_014351867.1|4029751_4030447_+|alpha/beta-hydrolase
MFDSPTPAVVVGLPGTGSDAHFARRAFGPECAQRGLELIAVDPDPRAVVDSYVAALDDAARRGPVLVAGISLGAAVAIEWASTRPEAAAGVVAALPAWTGPDSGGCPAAASAAGTAAALRADGLEEVVARMRAGSPAWLGDALERSWRSQWPDLPQALEEAAAYKWPEPQRLATLTTPVAVIGALDDPVHPWPVAQEWARLIAASALEEITLDELGADPGVLGRLGLAAFG
>NC_016887.1|WP_048833502.1|4029222_4029627_-|OB-fold-nucleic-acid-binding-domain-containing-protein
MSSFGGRRAASNPASGYFRRLGRRLTEDIDQLDAEELAETADASGACRASECRRGDEATMLGRLRSVEACPQSAGASVQAEFFDGTDAITLVWIGRKRIPGIESGRRIMVRGRVGDRDGRKVMYNPYYELRGNN
>NC_016887.1|WP_014351876.1|4037477_4038254_-|hypothetical-protein
MPTIDHFSYGWLTPVVAYLMSFTGSLLGLRCMARARSNSLRDGWMVAAAVAIGGTGIWVMHFIAMLGFTIDGASIRYNVPLTLISALIAMLVVWIGIGVAQRRDWGPGALLLGGAITGAGVGTMHYCGMYAMKSDAALDYNGWIVAVSIVIAVIAATAALWFTLHVRGTLATVGAAAVMGVAVSGMHYTGMFAMRVQHVAHAHQPSGAGAAQLLTPLTVGVSMVTVVLLLHLAMTEAGESEARTTRSRRPAQYWPTRD
>NC_016887.1|WP_081505602.1|4038791_4039343_-|ethanolamine-ammonia-lyase-light-chain-EutC
MPSRSAAAPRPPGSAGETGGAEALPRDTSAEVGIVLADGLSPRALLDHGPAMVTALVAELGPTVTFAPPVIATQARVALGDHIATALGVDTVLVLIGERPGLSVADSLGIYLTHRPRPGRTDAERNCVSNIHRNGLGYGQAARVVAGLIAGARRLGRSGVDLKDLSGADLTAAEHDPLTRAHG
>NC_016887.1|WP_014351878.1|4039723_4041145_-|ethanolamine-ammonia-lyase-subunit-EutB
MTGYTATLAGHTYRFDGLVDLLAKATPRRSGDELAGCAAESDAERAAAQWALADQPLTVFLNEPVVPYESDEITRLIVDTHDRVAFRPIAHLTVGDLRDRLLELAGGAVDEAAATLRAWAPGLTPEMVAAVSKIMRNQDLIAVAGAVDVRSAFRTTIGRPGTLATRLQPNHPTDDPRGIAAAILDGLLLGCGDAVIGINPATDSPRAAADLLTLLDEVRLRFDIPAQSCVLAHVSTTLALIESGAPVDLVFQSIAGTEGANSAFGVNLALLREANEAGRSLRRGTVGDNVMYFETGQGSALSADAHRGTGGRPVDQQTLEARAYAVARAFDPLLVNTVVGFIGPEYLYDGKQIIRAGLEDHFCGKLLGLPMGVDVCYTNHAEADADDMDTLLTLLGAAGCAFVIAVPGADDVMLGYQSLSFHDALYARQVLGLRPAPEFEAWLSRLGMIDDTGRVLPVAPLTSPLHQLTGVRR
>NC_016887.1|WP_014351879.1|4041224_4042376_-|cation:proton-antiporter
MSTTALALIELGAVLFALGVFARVAGRFGLSPIPLYLLGGLAFGQGGFIHLGAANEFGHIAGEIGVVLLLLLLGLEYTAAELMTGMRRSWPVGLLDIVANATPGAVVALLLGWGPVGALTLGGVTYISSSGIAAKVLNDLGRLGNRETPVILSILVFEDLTMAVYLPVLTTVLAGLSFASGLKSLGVALIAITVVLVVTLRYGRYVSAVVDSTDREVFLLKLLGAALLVAGVASALNVSTAVGAFLLGIAISGSTAREAVRLLEPLRDLFAAIFFVAFGLNTDPTAIPPVLGWAVALAVITTITKIATGWWGARRQGIRRMGRARAGVALVARGEFSIVIAGLAVTTGAIDGKLAALASAYVLIMAIIGPIAARVVEPVLERV
>NC_016887.1|WP_048833504.1|4042380_4042863_-|cation:proton-antiporter-regulatory-subunit
MNVDVTALPGIGVRKDFEVKSGRRIGVVAHRDGDIDLIVSKLEDPDACAAQVALTTDEAAVLANLLGAPQLVSRLNDDHRDMPGITTRQLPISDDSPYSGRTLGETQMRTRTKVSIVAVMRAGQLSPSPGPDFTFTAGDLLVVVGTPDGLDAAAKILTHG
>NC_016887.1|WP_148280683.1|4043087_4044302_+|two-component-sensor-histidine-kinase
MKWWAALSATAQEALIVAFVFTVGAALYGFGLYAMTEHSAQTPLTVRMALLALLCATSMWRRRKPMWALAAGLVPLLIDFALGPTIPIWLVYSDLVYAGVLYGTRRLSRVVIGAAITATVAGSVAALLVTGEWRAIVITVLASSAFLGTSIWWALTVRAHKETAQAERAKARALELVAELDRRAAIADERKTMARDLHDVIAGHLSAIAIQSEAALGLLARRDDGDPALSGVVESIRANSVSALHEMRTMIGLLRRDDGAEDLAAPRGLAQLSLLVDAARSAGSTVRVHGGAAEIALPSAVDQAAYRIVQEALTNAMKHAPGQEVDIDIAADATTLTVAIRNPLSPRGNGQPEPTDLPHRGLTNMRERAAVLGGEFTAGAADRTWTVRAELPLSAEPVTGGERR
>NC_016887.1|WP_014351882.1|4044298_4044946_+|response-regulator-transcription-factor
MTIRVLIADDHSAIRAGLRMILDAADGIEVVGEAADGDVAVAQARALRPDVVLMDVRMPGVDGIAATARITADGVAKVLILTTFDLDEYVFRTLRAGASGFVLKSVSGQDLVASVRAVAAGDGVLAPEVTRAVIDAFAAVPSAPAHREPDGLGDLTERELEVLECLGEGLSNAQIAGRLFIGETTVKTHVSRVLTKLGVRSRVQAAILARELRDR
>NC_016887.1|WP_014351883.1|4044960_4045320_-|DUF952-domain-containing-protein
MTYDTHTLVHLCTVTEWRTAEATGERRPPSLDTEGFVHLSTPRQVHLPANRLFAGRRDLVLLRLDPARLGSPVRWEPGVPSDDPGMLFPHLYGPLPAAAVVAVEDFQPDAQGVFAELDH
>NC_016887.1|WP_014351884.1|4045890_4046646_-|TetR/AcrR-family-transcriptional-regulator
MTDRPLPEPADQAGTLLALLWRHELPPRPAGRGPKQAVSVDEVVRTAIALADRDGLAKLSVRAVAAELGLRPMSLYTYVPSMRALTVLMVDEIAVADAPLPTDVSPRERLAAVARQVRAEVIAHPWLLEVSPWRMVLGPGRMRRYERQLAALDGIGLSEVEMDRVVAVLTEFATGNARMAVAAAREAAEMSDARWWEVHGPLLTQVMPAHEFPLASRVGAAVGELYQAPADPDGAFEFGLAALLDGILADG
>NC_016887.1|WP_014351885.1|4046776_4048534_+|DEAD/DEAH-box-helicase
MFAVWTWTGHGPGRPPRDLGVPAVQALAVPTGTAAQAAAGSATIEVADVDCTLLEPGEFAAADLPEPDASVAAWRRALADDMSSDIPLPLAAHALPNATGTAIVSAHFARTACTASRAVANELRDTLKADLRPYQSRGVSWLRAAVAEHGGAVLADEMGLGKTVQTIGFLLGRADGPQLVVCPTSLVGNWVHEIQRFAPGLHPVAWRGGAVEAEAGTVVVAGYPTLRLHGAALREIRWATAVFDEAQALKNPRTQVSKAARSLDAAATVALTGTPVENHLDELWAVLNLVAPRLFGHRTQFRRRFARPIQEGSANAAARLREAIEPVLLARRKDQVAASLPAKIHTDLLCDLAAEQERLYDQLLDRAIDDGFGHGAQRQSRVLAALTGLKQVCNHPGLITGELDELAGRSGKLDLCTDIVANNLDLGAPTLVFTQYRKTGELLVRHFAEQFGVSAPFFHGGLNQAERARIVSEFQAADGPPVLILSLRAAGTGLTLTRAADVIHFDRWWNPAVEAQASDRAHRIGQTRTVTVTTLTSGTTVEEHIAAMQRRKSALTDLGDAAGIAELARLDDDQLIEILRRKREN

Crispr_ID: NC_016887_5

• CRISPR_ID: NC_016887_5
• CRISPR_location: 6051233-6051339
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: WYL

Consensus repeat of NC_016887_5

Consensus_repeat	Method
GGCCGTGGTCCGCAGGGTGGGCCGCCGCC	CRISPRCasFinder

spacers of NC_016887_5

>5.1|6051262|49|NC_016887|CRISPRCasFinder
GGGTAATCCGCGCGGGCCGCAGCCGCCGCATCGTCCGGGTCCGCCCCCG

CRISPR arrays and Neighbor proteins around NC_016887_5

CRISPR arrays

The CRISPR arrays of NC_016887_5

>merge|NC_016887|5|6051233-6051339|CRISPRCasFinder
GGCCGTGGTCCGCAGGGTGGGCCGCCGCCGGGTAATCCGCGCGGGCCGCAGCCGCCGCATCGTCCGGGTCCGCCCCCGGGCCGTGGGCCGCAGGGTGGGCCGCCGCC

>NC_016887|5|5|6051233-6051339|CRISPRCasFinder
GGCCGTGGTCCGCAGGGTGGGCCGCCGCC	GGGTAATCCGCGCGGGCCGCAGCCGCCGCATCGTCCGGGTCCGCCCCCG
GGCCGTGGGCCGCAGGGTGGGCCGCCGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_016887.1|WP_014353637.1|6058909_6059533_+|AIM24-family-protein	unknown	unknown	gnl|CDD|376704
NC_016887.1|WP_014353641.1|6062207_6062570_+|MerR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|133388
NC_016887.1|WP_148280978.1|6054000_6055722_+|DUF2029-domain-containing-protein	unknown	unknown	gnl|CDD|227937
NC_016887.1|WP_014353636.1|6057359_6058709_-|TerD-family-protein	unknown	unknown	gnl|CDD|376767
NC_016887.1|WP_048833784.1|6042839_6045158_+|penicillin-binding-protein	unknown	unknown	gnl|CDD|223815
NC_016887.1|WP_048834479.1|6041787_6042666_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NC_016887.1|WP_014353627.1|6045895_6046321_+|GyrI-like-domain-containing-protein	unknown	unknown	gnl|CDD|214874
NC_016887.1|WP_158430226.1|6050439_6050859_+|DUF5318-family-protein	unknown	unknown	gnl|CDD|379953
NC_016887.1|WP_048833783.1|6040717_6041773_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NC_016887.1|WP_014353626.1|6045426_6045885_+|effector-binding-domain-containing-protein	unknown	unknown	gnl|CDD|379638
NC_016887.1|WP_014353642.1|6062651_6063740_-|WYL-domain-containing-transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl|CDD|225253
NC_016887.1|WP_014353635.1|6055787_6057338_-|TerD-family-protein	unknown	unknown	gnl|CDD|132992
NC_016887.1|WP_014353629.1|6047480_6048038_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|224609
NC_016887.1|WP_014353640.1|6061053_6062145_-|alkene-reductase	unknown	unknown	gnl|CDD|239243
NC_016887.1|WP_014353639.1|6060239_6061001_+|AIM24-family-protein	unknown	unknown	gnl|CDD|376704
NC_016887.1|WP_014353630.1|6048263_6049073_-|DUF1707-domain-containing-protein	unknown	unknown	gnl|CDD|377959
NC_016887.1|WP_148280782.1|6051493_6053971_+|transglycosylase-domain-containing-protein	unknown	unknown	gnl|CDD|223815
NC_016887.1|WP_048833785.1|6046390_6047488_-|inositol-3-phosphate-synthase	unknown	unknown	gnl|CDD|132491
NC_016887.1|WP_148280781.1|6049080_6050199_-|DUF1707-domain-containing-protein	unknown	unknown	gnl|CDD|377959
NC_016887.1|WP_014353638.1|6059538_6060237_+|AIM24-family-protein	unknown	unknown	gnl|CDD|376704

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_016887.1|WP_014353642.1|6062651_6063740_-|WYL-domain-containing-transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	2.8e-46	153.1	0.3

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_016887.1|WP_014353637.1|6058909_6059533_+|AIM24-family-protein	gnl|CDD|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	5.15219e-33
NC_016887.1|WP_014353641.1|6062207_6062570_+|MerR-family-transcriptional-regulator	gnl|CDD|133388	cd01282, HTH_MerR-like_sg3, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily. Putative helix-turn-helix (HTH) MerR-like transcription regulators (subgroup 3). Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	1.1168e-42
NC_016887.1|WP_148280978.1|6054000_6055722_+|DUF2029-domain-containing-protein	gnl|CDD|227937	COG5650, COG5650, Predicted integral membrane protein [Function unknown].	3.60313e-113
NC_016887.1|WP_014353636.1|6057359_6058709_-|TerD-family-protein	gnl|CDD|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	9.07576e-65
NC_016887.1|WP_048833784.1|6042839_6045158_+|penicillin-binding-protein	gnl|CDD|223815	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane].	2.9519e-162
NC_016887.1|WP_048834479.1|6041787_6042666_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.01734e-81
NC_016887.1|WP_014353627.1|6045895_6046321_+|GyrI-like-domain-containing-protein	gnl|CDD|214874	smart00871, AraC_E_bind, Bacterial transcription activator, effector binding domain. This domain is found in the probable effector binding domain of a number of different bacterial transcription activators.and is also present in some DNA gyrase inhibitors. The absence of a HTH motif in the DNA gyrase inhibitors is thought to indicate the fact that these do not bind DNA.	8.04301e-09
NC_016887.1|WP_158430226.1|6050439_6050859_+|DUF5318-family-protein	gnl|CDD|379953	pfam17249, DUF5318, Family of unknown function (DUF5318). This family of unknown function is mostly found in Actinobacteria.	3.66352e-80
NC_016887.1|WP_048833783.1|6040717_6041773_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.99823e-77
NC_016887.1|WP_014353626.1|6045426_6045885_+|effector-binding-domain-containing-protein	gnl|CDD|379638	pfam14526, Cass2, Integron-associated effector binding protein. This family contains Cass2 from Vibrio cholerae, an integron-associated protein that has been shown to bind cationic drug compounds with submicromolar affinity. Cass2 has been proposed to be representative of a larger family of independent effector-binding proteins associated with lateral gene transfer within Vibrio and other closely-related species.	4.66933e-12
NC_016887.1|WP_014353642.1|6062651_6063740_-|WYL-domain-containing-transcriptional-regulator	gnl|CDD|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	6.33453e-42
NC_016887.1|WP_014353635.1|6055787_6057338_-|TerD-family-protein	gnl|CDD|132992	cd06974, TerD_like, Uncharacterized proteins involved in stress response, similar to tellurium resistance terD. Tellurium resistance terD like proteins. This family is composed of uncharacterized proteins involved in stress response, such as the tellurium resistance proteins, chemical-damaging agent resistance proteins, and general stress proteins from a variety of organisms. The tellurium resistance proteins are homologous terA,-D,-E,-F,-Z,-X gene products, which confer tellurium resistance mediated by plasmids. Currently, the biochemical mechanism of tellurium resistance remains unknown. The family also contains several ter gene homologues, YceC, YceD, YceE, for which there is no clear evidence for any involvement in the tellurium resistance. A putative cAMP-binding protin CABP1 shows a significant similarity to the terD protein and is also included in this family.	3.19202e-22
NC_016887.1|WP_014353629.1|6047480_6048038_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	8.17743e-20
NC_016887.1|WP_014353640.1|6061053_6062145_-|alkene-reductase	gnl|CDD|239243	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes.	1.71711e-161
NC_016887.1|WP_014353639.1|6060239_6061001_+|AIM24-family-protein	gnl|CDD|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	1.54214e-16
NC_016887.1|WP_014353630.1|6048263_6049073_-|DUF1707-domain-containing-protein	gnl|CDD|377959	pfam08044, DUF1707, Domain of unknown function (DUF1707). This domain is found in a variety of Actinomycetales proteins. All of the proteins containing this domain are hypothetical and probably membrane bound or associated. Currently, it is unclear to the function of this domain.	1.53874e-12
NC_016887.1|WP_148280782.1|6051493_6053971_+|transglycosylase-domain-containing-protein	gnl|CDD|223815	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane].	3.99237e-171
NC_016887.1|WP_048833785.1|6046390_6047488_-|inositol-3-phosphate-synthase	gnl|CDD|132491	TIGR03450, mycothiol_INO1, inositol 1-phosphate synthase, Actinobacterial type. This enzyme, inositol 1-phosphate synthase as found in Actinobacteria, produces an essential precursor for several different products, including mycothiol, which is a glutathione analog, and phosphatidylinositol, which is a phospholipid.	0
NC_016887.1|WP_148280781.1|6049080_6050199_-|DUF1707-domain-containing-protein	gnl|CDD|377959	pfam08044, DUF1707, Domain of unknown function (DUF1707). This domain is found in a variety of Actinomycetales proteins. All of the proteins containing this domain are hypothetical and probably membrane bound or associated. Currently, it is unclear to the function of this domain.	3.46775e-13
NC_016887.1|WP_014353638.1|6059538_6060237_+|AIM24-family-protein	gnl|CDD|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	6.23706e-29

Protein sequences

>NC_016887.1|WP_158430226.1|6050439_6050859_+|DUF5318-family-protein
MRIQRQVVDYALRRRSLLADVYAGRVDVAEVCDANPYLLRAAKFHGRGSEVTCPICRKEQLTLVSWVYGDGLGPVAGSARTPEELLRLAETREEFSVHVVEVCRTCSWNHLVQSYVLGTTPVPPRRRSGTRANRRTAAE
>NC_016887.1|WP_148280781.1|6049080_6050199_-|DUF1707-domain-containing-protein
MSTPVPGRMRARDLDRSHTESVLDAAYAEGQLGADEYHDRIAQVRASKTVGELAALVDDLQAPSALPLSGRPRPVPTARTATAYPSSTRARDADRAAAAELLDLARTEGQLTEDEHRAYSDLLGEATTLGDLAELTADLQGHRRTPAPPNRAQPARQGWYLAVLTAAALAVAFGAFALTGRDAEPASAEAPVAAAPDAEAPQAGLPAPRPEFDDVEPIVVATPELITGAGMAHFIADYRAEFGDTIADEVSLYPDHGDVDRAIPGQPNRQVSYDYRGGFQRPSDPTTRKVDTPTVDLGVLDTAAIGAALANAAAIAQVPDGKVSHLSVEIHRFPPNEGRMVVAVYVSNTFRESGHFILGPGGEVLRVWPFEG
>NC_016887.1|WP_014353630.1|6048263_6049073_-|DUF1707-domain-containing-protein
MTRNDQLRARDTDRVEACALLDAALRDGQLTEDEHAARTRSAMRAKSFGELNVLIRDLQIPDDLAKAAVLHRERPKRRWWIPVAVLAVAAVIGATAGALRSEESGGPLAVIGVEAEEAEPAALPSLVSGSGFALFVDSYRQHFGDAIADTVTVMPEFVVVQRLEAGQPVLYRFDAEGFERTGSSTVSWSNGRPVDLGAIDLTVFAGLLRGAPESVRLPGGVVEHLGIGYELIASADAGPVIDIFVEDGGRTAHMTVDLAGKPLEIFPAD
>NC_016887.1|WP_014353629.1|6047480_6048038_-|helix-turn-helix-transcriptional-regulator
MLELAILGLLLESPMHGYELRKRLTGLLGAFRAFSYGSLYPTLRRMQADGLLAEEIPAGATTRRARRVYQLTPAGRERFNELLADTGPQNYTDDGFGVHLAFFSRTPAEARMRILEGRRRQVEERREGLREAIKKASGSLDRYTRQLHQLGLESSEREVRWLNELIAAEQSTKAAPQKEGNTGHE
>NC_016887.1|WP_048833785.1|6046390_6047488_-|inositol-3-phosphate-synthase
MSDVKAAESATEVRVAIVGVGNCASSLVQGVQYYKDADETATVPGLMHVKFGQYHVRDVKFVAAFDVDAKKVGFDLSEAIFASENNTIKISDVPPSDVVVQRGPTLDGIGKYYAQTIEVSEAEPVDVVKALKDAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVFIASDPEWAAKFTEAGVPIVGDDIKSQVGATITHRVMAKLFEDRGVQLDRTMQLNVGGNMDFKNMLERERLESKKISKTQAVTSNLKKELGANDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGIIIDAVRAAKIAKDRGIGGPVIPASAYLMKSPPQQLADDVARAQLEAFIIEG
>NC_016887.1|WP_014353627.1|6045895_6046321_+|GyrI-like-domain-containing-protein
MDFEIVTLEESLVAGLTVPLAGREVAARDLDLVNFTWDRYLAREKNVPRVAAYIGQNDHAVAVLGYEVSSMDEMDAGDVVTRVPRGRYAKFVVSDKPYDLLRTAWAQVRKAESAGTITRSHAAEIERYTGPTSVEVYVSLD
>NC_016887.1|WP_014353626.1|6045426_6045885_+|effector-binding-domain-containing-protein
MDFNVVDRQETLVAGTVLRSPALAVEGPRRTKVEEAWKRNLARALPGPPASAFVDHAPEINSYLTHIVGYKCRTIDDLLPGDVLARIPAGKFARFTLSGDDLGDTVVTVWRAIWDAEAAGRLERSYTGDFERYPDNRTVEVFVALADDSVDG
>NC_016887.1|WP_048833784.1|6042839_6045158_+|penicillin-binding-protein
MIVSSFRDRRRGGRGRSPEPEYASISGFDPRAGKSDDGGGGRSGRDPGDPDRRPRTRGSRIRRLILALFVIFIAVPALLMALFYWSAEIPSPSAMRTNQIATITAADGTTVIAKVVPPEGNRTPVPLAEVPVHVRNAMLSAEDRNFYTNPGYSIPAFLRAARDNLLGKENAGGGSTITQQYVKNAFLDSERTVTRKMRELVIAAKMAREWSKDDILAAYLNTIYYGRGAYGIAAAAKAYFNKPVPELTLAEGAVLAALVRSPSILDPETHLEDLKARWRYVLDGMVEMGVLPRADRETATFPPVIPITEVADDGAARGPEGLIRTQVLRELRAAGISEHELNTGALQITTTIDPKAQQAAVAAAQSAMEGQPPELRTAVVSIDPRTGAVRAYYGGADGVGFDFAQAPLQTGSAFKTFAVLAAQRQGISMAKQFDSSPVQVNDVLVRNVENESCGTCSLAEAFKRSLNTSFYRLTQSMFNGPQAIADAAHQAGIPEEIPGVPGRSLSENGGPPAPSIVLGVYQVRPIDMASAYATIAASGMYHQPYFVQRVVTGTGRVLLDRGAPEHQVGQQLPPGEQRFPAAIADRTTQAMLPIAAYSNGHALDGRQSAAKTGTTQLGDTGENKDAWMVGFTPSLSTAVWVGTEHSQAIRTAGGARIYGSGLPADIWKQTMDGALEGKPAESFPAPEGGSGLPIIPAGPPQPSGGPYDILNPPPGEQPRGPEIIFPPAPQAPEPEPREPIVIFPPAPPPPPPPPPPPRQVEILPGIVIPVPG
>NC_016887.1|WP_048834479.1|6041787_6042666_+|carbohydrate-ABC-transporter-permease
MTKEKPAAPVTRNVPWTRRLGSARLYIGALIVLVWGLGPFYWMAVTAFRDPRYTFENTPWPTHVTLENFRDVFDTSRGNDFGQAMVNSVIIGSITTVIALLLGVLAAYALARLTFRGKYLVSGLILSASMFPVVVLVTPLFQLFTDLGWIGKYQAMIIPNISFVLPMTVYILAAFFAELPWELEEAARIDGATKMQAFRLVMLPLAAPAVFTTAILAFIAAVNEYLLARLLSSESTKPVTVAIAGFSGNNPLVQPYASIMAAGTLVTIPLVIMVLLFQRRIISGLTAGGVKS
>NC_016887.1|WP_048833783.1|6040717_6041773_+|sugar-ABC-transporter-permease
MRRERVSDPSGTDTAVRKVRAGQADEPPRKRRGWGAVIADELRRSGKAWMFVAPVLIALAVVIGYPVFRALWMSFQQDSGGIDPETGMFIEGGSAGFSNYTHWLLQQCETAAGTVDCPTGNLGSQFWLAIGVTLFLTVVTVSLEVILGLAMAVVMGKTFRGRALLRAAVLIPWAIPTAVTARLWEFMFQYDGVVNRVLGTGILWTSDEWPARFAVIAADVWKTTPFMALLLLAGLQVIPNDVYEAAKVDGASAWQRFVHITLPLLKPALLVAILFRTMDALRMYDLPAIMTADNPATRTVSMLVVEQVRQGPNSAAALSTITFLMIFAVAFVLVKVLGANAVRTQEEQRKA
>NC_016887.1|WP_148280782.1|6051493_6053971_+|transglycosylase-domain-containing-protein
MSQRDRKASSTGPRPATRRPVTGAAGGPNTGERRAQSRSGPPSGPPPRRGGGDGDGSDGPGGRRPGAKKKSPWRIVRRTIYVLIALAIVVPSTVFLIAYSTVSVPQPGDLKTNQVAMIYAADGTTEISKVVPPEGNRTEVTIDQVPPHVRNAVTAAEDRDFYTNPGFSVSGFARAARDNLLGKESAGGGSTITQQYVKNALVGDERSLNRKLKELVISAKMARQWSKDEILAAYLNTIYFGRGAYGIDAAAKAYFDKPVQELTVAEGAVLAATIQLPSALDPEQNPEGAKARWNYVLDGMVSEGNLPAAERKSMQYPAVRPLASLGDKANDDGPEGLIKQQVLRELSEAGISEQQLNTAGLQITTTIDPKAQQAALDAVAENMQGEPEKLRTAVVSIDPKSGAVRAYYGGKDGQGYDFANAGLQTGSSFKVFGLAQNLEMGIPLSQMYDSSPLTVHGIKITNVEGESCGMCTIAEALKRSLNTSFYRMQLDMQNGPQKIADMAHKLGIPEEIPGVGKTLTEPDGSGPNNGIVLGQYQARVLDMASAYATLAASGVYHKPHFVQRVVTADGEVLLDRGEVAGEQRVSAAVADNVTAAMKPIAAYSRNHGLAGGRESAAKTGTAQLGDTGENKDAWMVGYTPSLSTAVWVGTEQGEPLRNYGGAMIYGSSLPSDIWKDTMDGALEGTPKETFPKPAPIKGQAGVPEWTAPYTAPSTTEAPPFQPPVVITPSQVEILPGITIPVPGVQPNPQAQVRPQPQQPSNPGPLPGQPTAPPEGSPGTGQGQSGEDSSDSGTESGGGGGGTGGGGTGGDEDSGGTSGAPPGRSR
>NC_016887.1|WP_148280978.1|6054000_6055722_+|DUF2029-domain-containing-protein
MGEPTNGNAHPGPAADRPGSARYESPAPLAPDLRSCDARDRPSRNDSLTAQLCTVIGGPVGDHALIGRTRFWTPMRVLFLFTVVFLALGWGTKAACIQQTEAANGGLTLDWNDGRQYTAMCYSDTVPLYGAERLNEGAFPYKKSWIEETPDGGTETRYMEYPVLSGLYQYVSMQIAKSWDAGPLPGALQVVIYFNVIAVGLALAWLVTVWATALLAGRRVWDAALVACSPLVIVHGFTNFDALATAFAATGLLAWARRKPVLAGVLLGLGGAAKLYPLLLLGPILVLCLRADPMQRTPSAHIKIRLNEIDGTAAAKEWIREIPHRVRILGTRPLGAAGLTAGAAAGTWAIVNLPIAVLFPTGWREFFRLNTTRHADPDSIYNVITSFTGWPGFDGVLDHGEPPTILNLVSLTLFVIACLLIAYIGLTAPRRPRLAQLCFLVIAAFLLTNKVWSPQYSLWLVPLAVLALPHRRILLAWMTIDALVWVPRMFYYLGLDRKGLPEQWFTGTVLLRDIAVIIVCALIVRQIYRPEDDLVRRDFVDDPVGGPLDHATDPLLPWLPERLRPKEGRVRTG
>NC_016887.1|WP_014353635.1|6055787_6057338_-|TerD-family-protein
MRQLTAGQNVPLTGQTVRFGVHADAAPALSALVVNDDLRVSDAGDVVTGDRTSTAGVSLDGDGVTLSLAEVRADAQAVLLVASTAGQPAELGKVVAELSENGTTTVEFAIAPAAGERALICLEVYRRQGAWKVRALGQGYAGGLAELLQAHGAAGMAPSAAGTAPAAPQADPYAMTAPAQGGSPLEVGHGLERLWMIFEDAARSAAALISARDYAAKRLDQELSEAVSDPATRNTPAANAARTAAQRRHDELNATAETNHRRDSDQLVRELAEADQALPPSLASWESPAWDRAPAPADGIRLGELYAIDRGPLRIPYCVPVPLNRPLWIDSESSAAVAPIVGALLARLVAAAPQRTTVVDIIDLTSAFTGLTGLLGPVLGGPPITHHTDISARLKTLADAAELAEMAYNSGAGTPPTEHRVLVAADFPHGYQATDVQRLGSLLMRGDLIGLSTVIIGSNESDSEDNLVATLSRACRHLPTIPGTPLFDPWTGSAWELDLDLLPQEPERQARILRAR
>NC_016887.1|WP_014353636.1|6057359_6058709_-|TerD-family-protein
MSATLAKGQNGPLSGNDVVISIQLTAQADLSALLVTEQGKVRSDADFVFFNQPSGPGVNLQPGPPGQPASLAVSLNAVPADIDQIRAVITLDDATSNFGRYPAPTAIVSDAAGNQLYEYRIDGLDTESIVIALELYRRQGAWKVRAVGQGYAGGFAALVTDHGVTVDDSPPPPPAAAPQPAPVPPPPAQPAYPTQPPPAAPPQGGYPAPPPPTAPYPPQGGGYPPPPGPGAGYPPPGAPVPPPPAQPQGEVSLSKDRPVSLQKGQRVTLRKEGGSALTFVKMGLGWDPVRSRGMFGNRTVDIDLDASVVMFADHQPADVAYYGQLSSKDGSVRHQGDNLTGEGEGDDEMILVDLTRIPAHISTLFFIVTSYKGHTFEQVQNAFCRLIDGGNNAELARYTLAGGMPFTAMAMAKVYRVGADWKMQALGEGFQAKHPGEAVPQLGRFLATG
>NC_016887.1|WP_014353637.1|6058909_6059533_+|AIM24-family-protein
MAQLFEQSKKVIEAHLAGTSLRAISGSMIAYEGNVQFKSAGFGGGDGVIAGLKRRATGEKLSLMECGGHGRVFFAVNGQNVSVVNLNNETLQVESQQLLAFCGNLRTDVRFAGLHGASAGQGLFTTTVSGQGQVALLSAGGPLIHLEVTPQFPLVVDPDAFVAARGNLNQSFVTDVSWRTVVGQDAGEAFSLRWDGQGVVSIQPAER
>NC_016887.1|WP_014353638.1|6059538_6060237_+|AIM24-family-protein
MFEKVNGKVVKVNVAMAGGVVARAGAMLFYTGDVSFAPHQIPGGGQGMPGGGIMRMAGRMMQGEHERTMLAQGNGEVHYGFAGLEVQVVQMQPGAVLRVEASRLLAHTAGLQSSVVSVMSSGGGGGGGGLMGALRGAASGAMTGQGMFTTQLSGQGAAVLLAGGGFLELQVGGPNPIVVDPQAFVAAYGNVQTELKTAMSWRDAVGRGSGEAMQLQCAGQGVVYVQASEEKL
>NC_016887.1|WP_014353639.1|6060239_6061001_+|AIM24-family-protein
MSQILNPMTLGESDNIPGNSYAYCIDLTKPWFMRKGAMIAYYGQIQFQLLTHGLQGSLMHMVSQQFSAPLFTSDYVVAEGHGKLIIGDRGYDINSYDLDDGNLTIRAANLLAFEPGLALNQSIVPGFLTLIGTGKFLASSNGPVMFAEPPLRVDPESLVGWADCPSPSHHYDQRWISSFLAAGAARFGVNSGEERQFDFTGAGTVLIQSSEKVLSDSALVRTIEGQLQSGMTVPGLQRIQGVVAQQLAGQQQY
>NC_016887.1|WP_014353640.1|6061053_6062145_-|alkene-reductase
MLLLTEYRDQNLTLLNRVVMSPMTRLRSLPDGSPTSDVVDYYAQRASAGLIITEGIWPHSSGQSEAWVPGLQTAAHVAAWRRVTEAVHAAGGRIFAQLMHGGRKGHPLARIDGTLPAGPSAVPDDDDVHLLDGTKSGPIMPAAMTRAEIAAAVEHFATAAANAIEAGFDGVEIHAANSYLVHQFLADNTNLRDDEYGGSIANRMRFALEVTDAVIAAVGAHRTAIRLSPGNPQFGMVEADPGPLYRPLVAELDRRGLAYLHLIDNDDYPALTDLRPLWHGTLIANVGENRDQTTGAAAERALTETGADLVSFGRAFISNPDLVERIARDRPLSPIRESHLYGRTAEGYSDYPSWDDDVRREVA
>NC_016887.1|WP_014353641.1|6062207_6062570_+|MerR-family-transcriptional-regulator
MRIGELAERTGVSVRSLRYYETQGLLASTRTGGGQRDYPESAVDRVIRIQEMFAAGLHSRTMAELLPCIHDTDGTPNATATPFLAETLVAERERIDACIRDLHRTREVLDGVIQAAQGKR
>NC_016887.1|WP_014353642.1|6062651_6063740_-|WYL-domain-containing-transcriptional-regulator
MPTTSARLLALLSLLQVRRDWPGALLAERLDVSARTVRRDVDRLRELGYPIASVKGPEGGYRLEAGTDLPPLLFDDEQAVALAVGLVLAETSGVGIEDAAARALNTIRQVMPARLRHRIDTLRIAAVDSWASGRTVRVDPDVLIALGAAIHAREELRFDYRSEKDAATAPSADPMPPRRVQPHHLVTWARRWYLIAWDLDRDDWRIFRADRITPRIPTGPRFTPRTVPGGSVSAFVAARFRGADSGRWPCRGEMILHLPATEVSRYAGDATVEALGPDRCKLTAGAWSWMALAASVGRFDADIEVIGPPELAEAFSRLSRRYAAAGTSSARLEHDRLGPPDEAVSRPTEARQPDHPESRGRC

Crispr_ID: NC_016887_6

• CRISPR_ID: NC_016887_6
• CRISPR_location: 6124145-6124239
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_016887_6

Consensus_repeat	Method
GCGGCTACCTCGCCTCCGCTCGG	CRISPRCasFinder

spacers of NC_016887_6

>6.1|6124168|49|NC_016887|CRISPRCasFinder
TCCGGCGCTCCCAGCGGCTACCTCGCCTCCGCTCGGTCCGGCGCTCCCA

CRISPR arrays and Neighbor proteins around NC_016887_6

CRISPR arrays

The CRISPR arrays of NC_016887_6

>merge|NC_016887|6|6124145-6124239|CRISPRCasFinder
GCGGCTACCTCGCCTCCGCTCGGTCCGGCGCTCCCAGCGGCTACCTCGCCTCCGCTCGGTCCGGCGCTCCCAGCGGCTACCTCGCCTGCGCTCGG

>NC_016887|6|6|6124145-6124239|CRISPRCasFinder
GCGGCTACCTCGCCTCCGCTCGG	TCCGGCGCTCCCAGCGGCTACCTCGCCTCCGCTCGGTCCGGCGCTCCCA
GCGGCTACCTCGCCTGCGCTCGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_016887.1|WP_014353687.1|6117213_6117960_+|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit	unknown	unknown	gnl|CDD|237086
NC_016887.1|WP_014353692.1|6120039_6120987_-|DNA-3-methyladenine-glycosylase-2-family-protein	unknown	unknown	gnl|CDD|223200
NC_016887.1|WP_081505529.1|6118503_6119496_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|379262
NC_016887.1|WP_048833794.1|6129353_6129794_+|PaaI-family-thioesterase	unknown	unknown	gnl|CDD|239527
NC_016887.1|WP_048833790.1|6115273_6117211_+|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl|CDD|236101
NC_016887.1|WP_048833791.1|6118011_6118209_-|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_048833793.1|6129004_6129325_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl|CDD|367091
NC_016887.1|WP_014353689.1|6118276_6118507_-|DUF397-domain-containing-protein	unknown	unknown	gnl|CDD|377231
NC_016887.1|WP_048833796.1|6132680_6133679_+|serine-hydrolase	unknown	unknown	gnl|CDD|379138
NC_016887.1|WP_014353684.1|6113878_6114166_+|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_014353695.1|6124523_6126404_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NC_016887.1|WP_048834487.1|6126631_6127624_-|oxidoreductase	unknown	unknown	gnl|CDD|274315
NC_016887.1|WP_048834488.1|6134177_6134840_+|YdcF-family-protein	unknown	unknown	gnl|CDD|99750
NC_016887.1|WP_014353698.1|6128819_6129008_+|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_048833792.1|6119803_6120007_+|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_014353694.1|6121334_6124130_-|FAD-binding-oxidoreductase	unknown	unknown	gnl|CDD|223354
NC_016887.1|WP_014353685.1|6114427_6115258_+|hypothetical-protein	unknown	unknown	unknown
NC_016887.1|WP_014353697.1|6127659_6128721_-|DNA-polymerase-IV	unknown	unknown	gnl|CDD|179564
NC_016887.1|WP_048833795.1|6129935_6132407_-|endopeptidase-La	unknown	unknown	gnl|CDD|223542
NC_016887.1|WP_048833797.1|6133666_6134128_+|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|238042

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_016887.1|WP_014353687.1|6117213_6117960_+|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit	gnl|CDD|237086	PRK12386, PRK12386, fumarate reductase iron-sulfur subunit; Provisional.	0
NC_016887.1|WP_014353692.1|6120039_6120987_-|DNA-3-methyladenine-glycosylase-2-family-protein	gnl|CDD|223200	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair].	1.23745e-28
NC_016887.1|WP_081505529.1|6118503_6119496_-|helix-turn-helix-domain-containing-protein	gnl|CDD|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	5.86655e-11
NC_016887.1|WP_048833794.1|6129353_6129794_+|PaaI-family-thioesterase	gnl|CDD|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	3.67051e-25
NC_016887.1|WP_048833790.1|6115273_6117211_+|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit	gnl|CDD|236101	PRK07803, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed.	0
NC_016887.1|WP_048834488.1|6134177_6134840_+|YdcF-family-protein	gnl|CDD|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	8.02048e-25
NC_016887.1|WP_048833793.1|6129004_6129325_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl|CDD|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	7.48399e-24
NC_016887.1|WP_014353689.1|6118276_6118507_-|DUF397-domain-containing-protein	gnl|CDD|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	2.00814e-16
NC_016887.1|WP_048833796.1|6132680_6133679_+|serine-hydrolase	gnl|CDD|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.03289e-15
NC_016887.1|WP_014353695.1|6124523_6126404_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	4.2208e-160
NC_016887.1|WP_048834487.1|6126631_6127624_-|oxidoreductase	gnl|CDD|274315	TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc. [Unknown function, Enzymes of unknown specificity].	2.47763e-166
NC_016887.1|WP_014353694.1|6121334_6124130_-|FAD-binding-oxidoreductase	gnl|CDD|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	6.73757e-79
NC_016887.1|WP_014353697.1|6127659_6128721_-|DNA-polymerase-IV	gnl|CDD|179564	PRK03352, PRK03352, DNA polymerase IV; Validated.	0
NC_016887.1|WP_048833795.1|6129935_6132407_-|endopeptidase-La	gnl|CDD|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0
NC_016887.1|WP_048833797.1|6133666_6134128_+|winged-helix-turn-helix-transcriptional-regulator	gnl|CDD|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.62492e-07

Protein sequences

>NC_016887.1|WP_014353694.1|6121334_6124130_-|FAD-binding-oxidoreductase
MTDEDGARVRLARVLRRRIGGEVDVSPRRRAEYSSDASNYRVLPAAVVFPRVDDDVAAVLDVARAEGLPVTARGAGTSVAGNAIGPGIVLDFSRHLDVVLELDPERRTARVQPGVVLSRLQRRAAAHGLRFGPDPSTQNRCTLGGMIGNNACGPHALAWGRTSDTVRELRVLDGTGTERRLAADLSAVPGLPEFTRDALAVLRTDLGRFERQASGYGLEHLLPERGSSIAKAFVGTEGTCGLLLEATVDLVPLPSETVLAVLGYPDMATAADDIAAVTACAPIAVEGIDARLVDIVRTHRGTVPDLPRGNSWLFVELAGATAGEAVAAASTLCRSTGAVDSTIVADPAAAAALWRIRADGAGLAGRTPDGHPAWPGWEDAAVPPQHLGAYLRDFGALTAEHRVDGLLYGHIGDGCIHVRLDLPINDAPQRFRAFLHDAAELVVRYGGSLSGEHGDGRARSELLPLMYSPDVLRTFAGFKALFDPDGLLNPGVLVDPAPIDHDLRLAGLPKVAGAGFAFPHDDGDLSTAVHRCVGVGKCRADTRTSGGFMCPSYLATADEKDSTRGRARVLQEVVRGALPWTSPAVAQSLDLCLSCKACRSDCPAGVDIATYKSETLYRRYRRRPRPIDHYTLGRLPTWLAVAGRMPRLLNAGARMAPLRRAGLRVGGMDPRREVPALARRNFRRIWRDEHREGASTGPEVMLWIDTFTDAFDPEIALAAVRLLESLGYRVRIPAKRACCGLTWISTGQLDGARKRLRATLDALDDHVRAGGIVVGLEPSCTAALRSDLPELLPDDPRAAPTAAAVRTLAEFLDAEPDWRAPDHSGQSVLVQPHCHQHAVLGFAADRRILARMGVEVTEITGCCGLAGNFGMQKGHYDISVAVAENGLLPALQRAGDNAILIADGFSCRIQATHLAGRPSRHLAQFILGNRR
>NC_016887.1|WP_014353692.1|6120039_6120987_-|DNA-3-methyladenine-glycosylase-2-family-protein
MRDTRVGSEASGTGSARTVTSDRPIDLAHTISPLRRGPGDPCYQLTRDGAHWLTARMPTGPVTYRLVQAGPGTVDARAWGPGAEEFLERLPWMLCLDEDLSGFAPEHPKIAEAHRRHPGLRMLRTGLVFEALVPAVLEQKVHTVSAHASWRRLVRQFGSIPPGPAPDGMRVAPDADGWRTIPSWTFHRANVGPQRAQTIVRAARVAESLERGTGLEPAAAARLLRSVPGIGEWTVAEISQRAFGDADALSVGDFHLAAIVGWTLLGRPLDDAAMVEYLEPLRPHRYRSVRLLSVSGQARKPKFGPRTPITDHSWH
>NC_016887.1|WP_048833792.1|6119803_6120007_+|hypothetical-protein
MQLTNLNMHVASLLACRNDPGVMTPEQAHAAMQLHLDCTVDECRVRRRARATLVESGRCVLDDRALR
>NC_016887.1|WP_081505529.1|6118503_6119496_-|helix-turn-helix-domain-containing-protein
MPRRSVTGDRTRGSPRSTARGSSQSRTEHAVPAGSVSSGSKTTSLPRRQLGRYLRDLRTQAGLTIAQAARLMEWGASTLQRLEKGQADRIRTIDIRELCRIYGVPDQLTEGLAGLAQQADTPSWWHAFGDVIPESFDVHVGLEAAAETVTAYHPELVPALLQTADYARALYRLAHPEESEDALDRRVQLRLQRQALITRRVAPATVRVIVHEAVLRRMVGSAKVMAGQLRHLADIGTRGNVMVRVLPFAAGVPLGVGTGAFTILEFGTDRAGRPLEPPVVHAEGLTGDLYLERPADVRRYHRAHENLQQCALDDQSSRHLLRQLAKEFLA
>NC_016887.1|WP_014353689.1|6118276_6118507_-|DUF397-domain-containing-protein
MSIDKGADIDLSGATWLRAGEGENGDAVEIAMLADGHVGMRDGKNPDGPVLVFTPGEWAAFTAGVQDGEFDRPGRS
>NC_016887.1|WP_048833791.1|6118011_6118209_-|hypothetical-protein
MDRGLKNTHPLYRRLRPHDWVEWLIVALLFAVSAVGIYVLTGSLASALFVGALVWLVAAGVVALL
>NC_016887.1|WP_014353687.1|6117213_6117960_+|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit
MGYDARFRIWRGDIDGGELHDFTVPVHEGEVVLDIIHRLQATQAPDLAVRWNCKAGKCGSCSAEVNGRPRLLCMTRMSTFTEDELITVTPMRTFPVIKDLVTDVSFNYEKAREVPSFTPPPDLKPGEYRMKQVDVERSQEFRKCIECFLCQNTCHVVRDHEDNKQAFSGPRYLMRIAELEMHPLDVADRRNMAQDEHGLGFCNITKCCTEVCPEHIKITDNALIPMKERVVDRKYDPLVWLGNKLFRR
>NC_016887.1|WP_048833790.1|6115273_6117211_+|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit
MPEVERHAYDVVVIGAGGAGLRAVIEARERGLSVAVVCKSLFGKAHTVMAEGGCAASMGNANEKDNWETHFRDTMRGGKFLNNWRMAELHAREAPDRVWELETYGALFDRTPDGRISQRNFGGHTYPRLAHVGDRTGLEIIRTMQQKIVSLQQEDYAETGDYESRIKVFAECTVTELLKDGDRISGAFGYWRESGRFILFETPAVVLATGGIGKSYKVTSNSWEYTGDGHALALRAGAALINMEFLQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNTDGKRFMFDYIPAVFKGQYAETEAEADQWLRDNDSARRTPDLLPRDEVARAINEEVKAGRGTEHGGVYLDIASRMPAEEIVRRLPSMHHQFKELADVDITKEPMEVGPTCHYVMGGIEVDPDTGAARVPGLFAAGECSGGMHGSNRLGGNSLSDLLVFGRRAGLGAAAYVQGLADRPAVADADIAAAAKTALAPFDPPATGTGENPYTLHTDLQQTMNDLVGIIRKEHEVREAIDKLAELRERFASVTVEGHRQFNPGWHLAIDLRNMLLVSECVAQAALLRTESRGGHTRDDHPAMDPQWRNKLLVCTLDPARPDGTVPGVSVTVEDQLPMRAELLALFDLAELEKYYTPAELAGHPAAGVSTDGEA
>NC_016887.1|WP_014353685.1|6114427_6115258_+|hypothetical-protein
MSAAPTVTPETGTGVFSRTRARITQQTLRTDRWWIPPLFTVLGLAAFVIYATIRSYVRTAYWVADYHYLTPFYSPCLSTSCVDGSSHFGTPFGEIPAILPLGFVALPFLLGFRLTCYYYRKAYYRSVWLSPPACAVAEPHKSYSGETRLPLIIQNVHRYFFYVAVIISVINTYDAIGAYHGASGGFGMGLGSLILTGNVILLWAYTLSCHSCRHIAGGRLKHFSAHPVRYWFWTQVSKLNTRHMALAWTTLGTLVITDFYVMLVASGTISDLRFID
>NC_016887.1|WP_014353684.1|6113878_6114166_+|hypothetical-protein
MTRSEFADLRYAVGQLRQSIEALRANYGDATTVRRLENDLERLTIDTEDLEQSPPPMVARRSQEPIYVPDSKSDEAAWMGAQDEGLGFHSRPRTK
>NC_016887.1|WP_014353695.1|6124523_6126404_+|ABC-transporter-ATP-binding-protein
MSIESVAWSQMYRRMNAPDEQRPFSMATARRILRFAAPHKRRLGAFLLFSVVSALLAVATPLLAGRVVNGIVDGAAPRVVVVLALAIGGLAVVDAALGLAIRWLSARIGEGLILDLRTAVFDHVQKMPIAFFTRTRTGALVSRLNNDVIGAQRAFSDTLSGVVANLVTVMLTLVVMVQLSWQITLLALLLLPVFVIPARRMGDRLADIQREAAGLNSAMSTQMTERFSAPGATLVKLFGRPHQESAEFALRARRVRDIGVRTAMLQTVFVTSLTLVSALAIALVYGLGGWYALAGRLDAGAVVALSLLLTRLYSPLTALASARMEIMSALVSFERVFEVLDLKPLIEDAPDAVPVPEGPVAVELRNVRFGYPSADKVSLASLEEVATLDTRGGVEVLHDISLRAEPGEMVALVGSSGAGKSTIAQLVSRLYDVDSGSVRLNDRDVRELSTRSIQQTVGLVTQDGHLFHDTIRANLLLARPEATEAELWDALERARLRDLVASLADGLDTVVGERGYRLSGGERQRLTIARLLLKQPRVVILDEATASLDSTSEAAVQEALAEALEGRTALVIAHRLSTIRAADKIVVLEDGNIVERGTHPQLLAAGGRYAELYRTQFAEEPAPVAA
>NC_016887.1|WP_048834487.1|6126631_6127624_-|oxidoreductase
MEFWAMVAHESDSGVVLARQQVGAEFLGPGAVTIKVHYSSANFKDGLAITPGGGVVRNYPIVPGIDLTGEVVESESEDFAPGDQVVAHGYEIGVSHHGGFAEYARVPAEWVVKLDGLSTRDAAALGTAGFTAALSVQALLDRGLTPDDGAILVTGATGGVGSVAVDILSGLGYEVIASTGKADAADHLADLGANEVIGRLPEPDTKVRPLSKARWAGAVDSVGGASLAYILSAIGYGGAVAASGLTGGTEVPTTVMPFILRNVALLGIDSVNHPIEKRRELWGRLANELRPRHLSEIENFAPVTEAERVLRSIKDGSHSGRTVFGVAGEF
>NC_016887.1|WP_014353697.1|6127659_6128721_-|DNA-polymerase-IV
MPRWLLHVDLDQFQAAVEFRRHPELRGRPVIVGGNGDPQEPRKVVTCASYPARAFGVRAGMALRTAVRKCPEGVFLPLDMTSYEEASEEVMALLRTFGPVEVWGWDEAFLAADTDDPEGLAREIRAAIAELELSCSVGIGDNKLTAKLATGFAKSSGKDSAEPGAGAAAGMFRLTADNWTEVMAHRPTSALWGIGNRIAARLAELGIETVGDLMASDRHRLAQAFGPTTGPYLWVLGKGAGDKEVVTEPRIPVGRSKSETFPHDLTEREEIRAQVARLAGEVADEMAEAGRVTIRVSVTVRTNTFYTRSKQSKLPEPTTDRTAIIEAALRIIDRFELDRPVRLLGVRLELVPV
>NC_016887.1|WP_014353698.1|6128819_6129008_+|hypothetical-protein
METALRALTGEHRTRSEAVRYALLRTYKELLLEQAAADSERLDNDPDDRAEMLAIQRFMGVE
>NC_016887.1|WP_048833793.1|6129004_6129325_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MIFRGAIYEIKALPGARGHEQQGRRYCVVIQSDRFASSTVIVAMTSTSAAPAIFRPEIEFDGTKTRILADQIYTVAPERLGQCKGSLDGSELSELDRALMLKLGLL
>NC_016887.1|WP_048833794.1|6129353_6129794_+|PaaI-family-thioesterase
MTTPELGIEQARQVLAAQPFAQLVGTELTGFGDGAATLVIPLREELGQQFGFVHGGVLAYAADNAITFAAGTVLGPNVLTGGFSVTYLRPASGKRLRAEAKVTGSTRRQAVVSCEIYSEDDGGEPVLCAVAQGTTRTVDRELGNGG
>NC_016887.1|WP_048833795.1|6129935_6132407_-|endopeptidase-La
MTAAQNLPVLFLTDPIVLPGMVVPIELDESAQAAIDAARAAKTDQVLVAPRLDEGYAAYGVVATIEQVGRLRGGAPAAVLKAERRAKIGHGVTGPGAALWVEAEPVEDVPADGRTKELAAEYKKLVVSVLQRREAWQVIDAVNQLSDPSAIADTAGYATYLTSEQKRELLETPEPAKRLATLIEWTKAHIAEAEVSEKISEEVREGMEKSQREFLLRQQLNAIRKELGEDEPDGAEDYRTRVEQADLPDSVREAALREVGRLERASDQSPESGWIRTWLDTVLELPWTVKTTDSTDVSAARAVLDADHHGLDEVKDRMVEYLAVRSRRAARGLEVVGGRGSGAVLVLVGPPGVGKTSLGESVARALGRKFVRVALGGVRDEAEIRGHRRTYVGALPGRIVRAMKEAGSMNPVVLLDEIDKVGSDFRGDPAAALLEVLDPAQNHTFRDHYLDLDLDLSDVLFIATANVMETIPGPLLDRMELITVDGYTEDDKVAIARDFLVPRQLERNALTAEEVTVTDAALRELAANYTREAGVRQMERLIAKALRKAATKLSEGGPVADAVPTIGLGYDPDLGYDDLLAEVASENSRVAESGRTAAVSGESLTIDVGDLKDYLGRPRFTPDSVERTAVPGVATGLAVTGLGGDVLYIETNAVDGERSLTLTGQLGDVMKESAQIALTYVRSHLEEIGIEPSVLDRNIHVHFPAGAVPKDGPSAGVTMVTALVSLALGRQVRADVGMTGEVTLNGRVLPIGGVKQKLLAAQRAGLKTVFIPARNEPDLDDVPADVLAALDVRPVSDVADILAYAIEPVAEPALDGRPLAATA
>NC_016887.1|WP_048833796.1|6132680_6133679_+|serine-hydrolase
MVIPLLTGCASPGAAERTCGPMPEPGVATAEEWLGRIHAEPDTIALAIDDGRGNTIERRADDQQPLASTVKVVVLAAYARAVAAGTLDPREAVPVSEWERWYLPGTDGGAHLRARARLTAATVTLDQLVSAMIQESDNAVHDYLRDRLGDQALIDAAAAGGWHDYTPNTKLGEAIRALDPGSDGGWATAQRYASDPTYRATIQSKTLPPIDIQLAWTETTATGSARQLASMFRAIATGSFGPGSEVARAQLEWPRPPAGSVAIGAKGGSYPGMLADAFYLRRTEGTVATAVLLDHRMPESTWIAALATLSEQQLLLRAMTEPATWRRLACAT
>NC_016887.1|WP_048833797.1|6133666_6134128_+|winged-helix-turn-helix-transcriptional-regulator
MRDMIDVAAKLAELEARIEELEGRRRTEDAERGFVEYGGSVDFGGPIDWTIRYSAAAIPQLPAQARVDVLAALGHPVRRALVESLLDGPRTGAELAQAVSLTSAGQLYHHIRALTAAKVIEQHSRGAYRIPAQKVVPILILMTAAADIAEVLR
>NC_016887.1|WP_048834488.1|6134177_6134840_+|YdcF-family-protein
MVELPARIRADVETLWSFTQMHQAVRSADIGIGLGSHDLAVADWAATLYRQGRIPMIVFSGANSPTTTAVFPRGEAVHYRERALALGVPAEAVLVEPEATNTSENIAFTHRLLRQAGLLDAIRSAVLICRPYHQRRTHAVCRKLWPEVDIVCTSSPVSLDDYLCAIGDVNRVVTMLVGEVQRAWLYPMKGWAIPIEVPDEVRSAYRRLVDAGYDDRLLPE

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_016887_1	1.1|2996758|56|NC_016887|CRISPRCasFinder	2996758-2996813	56	NC_016887.1	1794210-1794265	0	1.0
NC_016887_3	3.12|3959412|30|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959412-3959441	30	NC_016887.1	5892004-5892033	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	NC_016887.1	4326910-4326928	1	0.947

1. spacer 1.1|2996758|56|NC_016887|CRISPRCasFinder matches to position: 1794210-1794265, mismatch: 0, identity: 1.0

tgtgattccggtagcggcgccggctcgggtaacgggtccggtgattgctacggggg	CRISPR spacer
tgtgattccggtagcggcgccggctcgggtaacgggtccggtgattgctacggggg	Protospacer
********************************************************

2. spacer 3.12|3959412|30|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to position: 5892004-5892033, mismatch: 0, identity: 1.0

gacggcaccaagttctactgcaccggctcg	CRISPR spacer
gacggcaccaagttctactgcaccggctcg	Protospacer
******************************

3. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to position: 4326910-4326928, mismatch: 1, identity: 0.947

cgccgcgaagaaggctccg	CRISPR spacer
cgcggcgaagaaggctccg	Protospacer
*** ***************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MT657336	Microbacterium phage ClearAsMud, complete genome	33868-33886	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MK864266	Gordonia phage Arri, complete genome	19290-19308	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MN284907	Gordonia phage Fireball, complete genome	18726-18744	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MK864264	Gordonia phage VanDeWege, complete genome	19400-19418	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MH479910	Gordonia phage Danyall, complete genome	19108-19126	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MT639651	Gordonia phage Portcullis, complete genome	18636-18654	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MH479917	Gordonia phage KimmyK, complete genome	19308-19326	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MH669015	Gordonia phage TillyBobJoe, complete genome	18391-18409	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MK814761	Gordonia phage SmokingBunny, complete genome	18592-18610	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	KX557286	Gordonia phage Twister6, complete genome	19019-19037	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MK864267	Gordonia phage Valary, complete genome	19525-19543	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MT522001	Microbacterium phage Karate, complete genome	28673-28691	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MK967381	Gordonia phage RogerDodger, complete genome	19486-19504	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MT310872	Gordonia phage Evamon, complete genome	18594-18612	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MT521998	Gordonia phage Jambalaya, complete genome	18373-18391	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MK864265	Gordonia phage Barb, complete genome	19308-19326	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	NC_030913	Gordonia phage Wizard, complete genome	18726-18744	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	NC_042345	Phage Salvo, complete genome	11945-11963	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MN010760	Gordonia phage Nubi, complete genome	18614-18632	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	MT522003	Microbacterium phage Rie18, complete genome	28219-28237	0	1.0
NC_016887_4	4.2|4036194|19|NC_016887|CRISPRCasFinder	4036194-4036212	19	LR743524	Xylella phage Bacata genome assembly, chromosome: 1	32748-32766	0	1.0
NC_016887_2	2.2|3956417|31|NC_016887|CRISPRCasFinder,PILER-CR	3956417-3956447	31	MT657339	Gordonia phage SpeedDemon, complete genome	8006-8036	3	0.903
NC_016887_2	2.2|3956417|31|NC_016887|CRISPRCasFinder,PILER-CR	3956417-3956447	31	NC_031074	Gordonia phage Bantam, complete genome	7700-7730	3	0.903
NC_016887_2	2.2|3956417|31|NC_016887|CRISPRCasFinder,PILER-CR	3956417-3956447	31	MN908691	Gordonia phage DatBoi, complete genome	8525-8555	3	0.903
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NC_014818	Asticcacaulis excentricus CB 48 plasmid pASTEX01, complete sequence	22668-22699	5	0.844
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_AP018829	Asticcacaulis excentricus strain M6 plasmid pASEM-1, complete sequence	221492-221523	5	0.844
NC_016887_3	3.12|3959412|30|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959412-3959441	30	NZ_LR134449	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 7, complete sequence	49116-49145	5	0.833
NC_016887_2	2.2|3956417|31|NC_016887|CRISPRCasFinder,PILER-CR	3956417-3956447	31	NZ_CP021915	Sagittula sp. P11 plasmid unnamed2, complete sequence	219944-219974	6	0.806
NC_016887_2	2.2|3956417|31|NC_016887|CRISPRCasFinder,PILER-CR	3956417-3956447	31	NZ_CP010856	Marinovum algicola DG 898 plasmid pMaD1, complete sequence	223506-223536	6	0.806
NC_016887_2	2.2|3956417|31|NC_016887|CRISPRCasFinder,PILER-CR	3956417-3956447	31	NZ_CP045373	Sulfitobacter sp. THAF37 plasmid pTHAF37_a, complete sequence	222357-222387	6	0.806
NC_016887_2	2.2|3956417|31|NC_016887|CRISPRCasFinder,PILER-CR	3956417-3956447	31	NZ_CP018081	Sulfitobacter sp. AM1-D1 plasmid unnamed5, complete sequence	43620-43650	6	0.806
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP032870	Pseudomonas syringae pv. actinidiae strain P220 plasmid pLKQG722, complete sequence	7999-8029	6	0.806
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_KY362366	Pseudomonas amygdali pv. tabaci strain 0893-29 plasmid pPt0893-29, complete sequence	28859-28889	6	0.806
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP032632	Pseudomonas syringae pv. actinidiae str. Shaanxi_M228 plasmid pM228, complete sequence	37803-37833	6	0.806
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP011973	Pseudomonas syringae pv. actinidiae ICMP 18884 plasmid unnamed, complete sequence	35281-35311	6	0.806
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP012180	Pseudomonas syringae pv. actinidiae ICMP 18708 plasmid unnamed, complete sequence	37698-37728	6	0.806
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP019733	Pseudomonas syringae pv. actinidiae strain CRAFRU 14.08 plasmid unnamed, complete sequence	25888-25918	6	0.806
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP017010	Pseudomonas syringae pv. actinidiae strain NZ-47 plasmid pPsa22180a, complete sequence	35281-35311	6	0.806
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP017008	Pseudomonas syringae pv. actinidiae strain ICMP 20586 plasmid pPsa20586, complete sequence	35281-35311	6	0.806
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP019731	Pseudomonas syringae pv. actinidiae strain CRAFRU 12.29 plasmid unnamed, complete sequence	25899-25929	6	0.806
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	CP000664	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA03, complete sequence	24027-24058	6	0.812
NC_016887_3	3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958924-3958955	32	NZ_CP019603	Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence	664335-664366	6	0.812
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	76414-76445	6	0.812
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	364013-364044	6	0.812
NC_016887_3	3.12|3959412|30|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959412-3959441	30	NC_019407	Caulobacter phage CcrMagneto, complete genome	107140-107169	6	0.8
NC_016887_2	2.5|3956600|31|NC_016887|CRISPRCasFinder,PILER-CR	3956600-3956630	31	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1415110-1415140	7	0.774
NC_016887_2	2.7|3956416|32|NC_016887|CRT	3956416-3956447	32	NZ_CP021915	Sagittula sp. P11 plasmid unnamed2, complete sequence	219944-219975	7	0.781
NC_016887_2	2.7|3956416|32|NC_016887|CRT	3956416-3956447	32	NZ_CP010856	Marinovum algicola DG 898 plasmid pMaD1, complete sequence	223506-223537	7	0.781
NC_016887_2	2.7|3956416|32|NC_016887|CRT	3956416-3956447	32	NZ_CP045373	Sulfitobacter sp. THAF37 plasmid pTHAF37_a, complete sequence	222356-222387	7	0.781
NC_016887_2	2.7|3956416|32|NC_016887|CRT	3956416-3956447	32	NZ_CP018081	Sulfitobacter sp. AM1-D1 plasmid unnamed5, complete sequence	43619-43650	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	202354-202385	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	449294-449325	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	230770-230801	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	797169-797200	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	130174-130205	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	202870-202901	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	202870-202901	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	202870-202901	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	202870-202901	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	202870-202901	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_KY362366	Pseudomonas amygdali pv. tabaci strain 0893-29 plasmid pPt0893-29, complete sequence	28858-28889	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP032632	Pseudomonas syringae pv. actinidiae str. Shaanxi_M228 plasmid pM228, complete sequence	37802-37833	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP011973	Pseudomonas syringae pv. actinidiae ICMP 18884 plasmid unnamed, complete sequence	35280-35311	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NC_008043	Ruegeria sp. TM1040 megaplasmid, complete sequence	466979-467010	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP032870	Pseudomonas syringae pv. actinidiae strain P220 plasmid pLKQG722, complete sequence	7999-8030	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP012180	Pseudomonas syringae pv. actinidiae ICMP 18708 plasmid unnamed, complete sequence	37697-37728	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP019733	Pseudomonas syringae pv. actinidiae strain CRAFRU 14.08 plasmid unnamed, complete sequence	25887-25918	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP017010	Pseudomonas syringae pv. actinidiae strain NZ-47 plasmid pPsa22180a, complete sequence	35280-35311	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP017008	Pseudomonas syringae pv. actinidiae strain ICMP 20586 plasmid pPsa20586, complete sequence	35280-35311	7	0.781
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP019731	Pseudomonas syringae pv. actinidiae strain CRAFRU 12.29 plasmid unnamed, complete sequence	25898-25929	7	0.781
NC_016887_2	2.10|3956599|32|NC_016887|CRT	3956599-3956630	32	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1415110-1415141	7	0.781
NC_016887_3	3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958924-3958955	32	MN657133	Cryobacterium sp. strain ANT_H10B plasmid pA10BH1, complete sequence	28578-28609	7	0.781
NC_016887_3	3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958924-3958955	32	HQ332141	Halorubrum phage CGphi46 genomic sequence	25192-25223	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	388798-388829	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	717377-717408	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NC_012718	Burkholderia glumae BGR1 plasmid bglu_2p, complete sequence	83449-83480	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP009433	Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_1, complete sequence	186649-186680	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NC_011368	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence	1062757-1062788	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP045091	Burkholderia glumae strain GX plasmid pWSGX3, complete sequence	20255-20286	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP035000	Rhizobium acidisoli strain FH23 plasmid pRapFH23b, complete sequence	193867-193898	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	920629-920660	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	923570-923601	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	820688-820719	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	116942-116973	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	889298-889329	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	819803-819834	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	825322-825353	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	825312-825343	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	820681-820712	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	820700-820731	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	820672-820703	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	920707-920738	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	920705-920736	7	0.781
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	920689-920720	7	0.781
NC_016887_3	3.6|3959046|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959046-3959077	32	NZ_CP022747	Sphingobium hydrophobicum strain C1 plasmid p1, complete sequence	200711-200742	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP050093	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence	373249-373280	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP050082	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence	569365-569396	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	318016-318047	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NC_008384	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence	540041-540072	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP025014	Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence	444935-444966	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP049732	Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence	510817-510848	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP053441	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence	344198-344229	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP018230	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence	16166-16197	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP025508	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence	455119-455150	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP016289	Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence	544761-544792	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP048282	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248d, complete sequence	419618-419649	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP013516	Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence	432635-432666	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP054023	Rhizobium sp. JKLM12A2 plasmid pPR12A202, complete sequence	124810-124841	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP022667	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence	182454-182485	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP054033	Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence	282081-282112	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP053208	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence	467350-467381	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP050087	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence	453903-453934	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP013553	Rhizobium phaseoli strain N931 plasmid pRphaN931a, complete sequence	306011-306042	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP013538	Rhizobium phaseoli strain R630 plasmid pRphaR630a, complete sequence	310209-310240	7	0.781
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP013564	Rhizobium phaseoli strain N831 plasmid pRphaN831a, complete sequence	306011-306042	7	0.781
NC_016887_3	3.12|3959412|30|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959412-3959441	30	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	400739-400768	7	0.767
NC_016887_3	3.12|3959412|30|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959412-3959441	30	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	646483-646512	7	0.767
NC_016887_2	2.1|3956356|31|NC_016887|CRISPRCasFinder	3956356-3956386	31	MH617110	Microviridae sp. isolate ctdb208, complete genome	2799-2829	8	0.742
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	449294-449324	8	0.742
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	230770-230800	8	0.742
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	130174-130204	8	0.742
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	202355-202385	8	0.742
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	797170-797200	8	0.742
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	202871-202901	8	0.742
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	202871-202901	8	0.742
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	202871-202901	8	0.742
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	202871-202901	8	0.742
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	202871-202901	8	0.742
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	CP054917	Streptomyces sp. NA02950 plasmid unnamed, complete sequence	106583-106613	8	0.742
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_KY349138	Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_2, complete sequence	12554-12584	8	0.742
NC_016887_2	2.5|3956600|31|NC_016887|CRISPRCasFinder,PILER-CR	3956600-3956630	31	NZ_CP021356	Rhodococcus sp. S2-17 plasmid pRB29, complete sequence	182217-182247	8	0.742
NC_016887_3	3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958924-3958955	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	519828-519859	8	0.75
NC_016887_3	3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958924-3958955	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1293240-1293271	8	0.75
NC_016887_3	3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958924-3958955	32	NZ_CP009293	Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence	323485-323516	8	0.75
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	681828-681859	8	0.75
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	691975-692006	8	0.75
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	689461-689492	8	0.75
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	687649-687680	8	0.75
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	356630-356661	8	0.75
NC_016887_3	3.6|3959046|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959046-3959077	32	NZ_KY000056	Agrobacterium vitis strain Tun201 plasmid pTi_Tun201, complete sequence	137591-137622	8	0.75
NC_016887_3	3.6|3959046|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959046-3959077	32	NZ_KY000060	Agrobacterium tumefaciens strain CFBP2407 plasmid pTi_CFBP2407, complete sequence	183188-183219	8	0.75
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP030764	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence	395322-395353	8	0.75
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP022566	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK02, complete sequence	420390-420421	8	0.75
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	MK460245	Streptomyces phage BartholomewSD, complete genome	11203-11234	8	0.75
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	MN234208	Streptomyces phage Alvy, complete genome	11203-11234	8	0.75
NC_016887_3	3.12|3959412|30|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959412-3959441	30	NZ_CP044987	Deinococcus sp. AJ005 plasmid p96k, complete sequence	20292-20321	8	0.733
NC_016887_3	3.12|3959412|30|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959412-3959441	30	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	569554-569583	8	0.733
NC_016887_2	2.1|3956356|31|NC_016887|CRISPRCasFinder	3956356-3956386	31	NZ_CP039426	Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence	69034-69064	9	0.71
NC_016887_2	2.1|3956356|31|NC_016887|CRISPRCasFinder	3956356-3956386	31	NZ_CP039431	Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence	69035-69065	9	0.71
NC_016887_2	2.1|3956356|31|NC_016887|CRISPRCasFinder	3956356-3956386	31	MK524505	Gordonia phage Dogfish, complete genome	35352-35382	9	0.71
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP030863	Streptomyces globosus strain LZH-48 plasmid unnamed1, complete sequence	29463-29493	9	0.71
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	MH651171	Mycobacterium phage Collard, complete genome	24776-24806	9	0.71
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NC_028947	Mycobacterium phage Kratio, complete genome	24450-24480	9	0.71
NC_016887_2	2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR	3956539-3956569	31	NZ_CP018784	Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence	77725-77755	9	0.71
NC_016887_2	2.5|3956600|31|NC_016887|CRISPRCasFinder,PILER-CR	3956600-3956630	31	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3109936-3109966	9	0.71
NC_016887_2	2.6|3956355|32|NC_016887|CRT	3956355-3956386	32	NZ_CP039426	Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence	69033-69064	9	0.719
NC_016887_2	2.6|3956355|32|NC_016887|CRT	3956355-3956386	32	NZ_CP039431	Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence	69034-69065	9	0.719
NC_016887_2	2.6|3956355|32|NC_016887|CRT	3956355-3956386	32	MH617110	Microviridae sp. isolate ctdb208, complete genome	2799-2830	9	0.719
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_KY349138	Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_2, complete sequence	12553-12584	9	0.719
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	CP054917	Streptomyces sp. NA02950 plasmid unnamed, complete sequence	106583-106614	9	0.719
NC_016887_2	2.10|3956599|32|NC_016887|CRT	3956599-3956630	32	NZ_CP021356	Rhodococcus sp. S2-17 plasmid pRB29, complete sequence	182217-182248	9	0.719
NC_016887_2	2.10|3956599|32|NC_016887|CRT	3956599-3956630	32	NC_042091	Pseudomonas phage nickie, complete genome	23729-23760	9	0.719
NC_016887_3	3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958924-3958955	32	NZ_CP022424	Vitreoscilla filiformis strain ATCC 15551 plasmid pVF1, complete sequence	135606-135637	9	0.719
NC_016887_3	3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958924-3958955	32	MK937597	Gordonia phage Spooky, complete genome	3952-3983	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1311585-1311616	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1047383-1047414	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1195993-1196024	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1222799-1222830	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	877065-877096	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	902100-902131	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	424939-424970	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1668265-1668296	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1794470-1794501	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	51678-51709	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	560328-560359	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	636407-636438	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	379353-379384	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	379356-379387	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	379356-379387	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	379356-379387	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	379356-379387	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	379356-379387	9	0.719
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	151585-151616	9	0.719
NC_016887_3	3.6|3959046|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959046-3959077	32	NZ_LR134456	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence	110858-110889	9	0.719
NC_016887_3	3.7|3959107|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959107-3959138	32	NZ_CP009865	Klebsiella pneumoniae subsp. pneumoniae strain KPNIH29 plasmid pKPN-80a, complete sequence	137218-137249	9	0.719
NC_016887_3	3.8|3959168|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959168-3959199	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3405359-3405390	9	0.719
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	76863-76894	9	0.719
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP054029	Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence	183554-183585	9	0.719
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	CP007642	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803a, complete sequence	367203-367234	9	0.719
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	MN304822	Phage 64_12, partial genome	28140-28171	9	0.719
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1216700-1216731	9	0.719
NC_016887_2	2.5|3956600|31|NC_016887|CRISPRCasFinder,PILER-CR	3956600-3956630	31	NC_042091	Pseudomonas phage nickie, complete genome	23730-23760	10	0.677
NC_016887_2	2.6|3956355|32|NC_016887|CRT	3956355-3956386	32	MK524505	Gordonia phage Dogfish, complete genome	35351-35382	10	0.688
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP030863	Streptomyces globosus strain LZH-48 plasmid unnamed1, complete sequence	29462-29493	10	0.688
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NZ_CP018784	Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence	77724-77755	10	0.688
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	MH651171	Mycobacterium phage Collard, complete genome	24776-24807	10	0.688
NC_016887_2	2.9|3956538|32|NC_016887|CRT	3956538-3956569	32	NC_028947	Mycobacterium phage Kratio, complete genome	24450-24481	10	0.688
NC_016887_3	3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958924-3958955	32	NZ_CP020041	Streptomyces sp. 3211 isolate 3 plasmid p3211-2, complete sequence	79847-79878	10	0.688
NC_016887_3	3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958924-3958955	32	NZ_CP010408	Streptomyces vietnamensis strain GIMV4.0001 plasmid pSVL1, complete sequence	72580-72611	10	0.688
NC_016887_3	3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958924-3958955	32	NZ_CP015530	Rhodococcus sp. WB1 plasmid pWB1, complete sequence	193203-193234	10	0.688
NC_016887_3	3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958924-3958955	32	MN096370	Gordonia phage Squiddly, complete genome	4645-4676	10	0.688
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NZ_CP024940	Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence	650333-650364	10	0.688
NC_016887_3	3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3958985-3959016	32	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	373831-373862	10	0.688
NC_016887_3	3.6|3959046|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959046-3959077	32	NZ_CP012254	Cronobacter sakazakii strain NCTC 8155 plasmid pCS1, complete sequence	7873-7904	10	0.688
NC_016887_3	3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959229-3959260	32	NZ_CP021126	Rhizobium sp. Kim5 plasmid pRetKim5b, complete sequence	402193-402224	10	0.688
NC_016887_3	3.11|3959351|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959351-3959382	32	NZ_CP015269	Mycobacterium chimaera strain ZUERICH-2 plasmid unnamed 2, complete sequence	89982-90013	10	0.688
NC_016887_3	3.11|3959351|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959351-3959382	32	NZ_CP033574	Shewanella algae strain KC-Na-R1 plasmid pKC-Na-R1, complete sequence	38688-38719	10	0.688
NC_016887_3	3.11|3959351|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR	3959351-3959382	32	NZ_CP016463	Bosea sp. RAC05 plasmid pBSY19_1, complete sequence	267340-267371	10	0.688

1. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MT657336 (Microbacterium phage ClearAsMud, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

2. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MK864266 (Gordonia phage Arri, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

3. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MN284907 (Gordonia phage Fireball, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

4. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MK864264 (Gordonia phage VanDeWege, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

5. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MH479910 (Gordonia phage Danyall, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

6. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MT639651 (Gordonia phage Portcullis, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

7. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MH479917 (Gordonia phage KimmyK, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

8. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MH669015 (Gordonia phage TillyBobJoe, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

9. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MK814761 (Gordonia phage SmokingBunny, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

10. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to KX557286 (Gordonia phage Twister6, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

11. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MK864267 (Gordonia phage Valary, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

12. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MT522001 (Microbacterium phage Karate, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

13. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MK967381 (Gordonia phage RogerDodger, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

14. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MT310872 (Gordonia phage Evamon, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

15. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MT521998 (Gordonia phage Jambalaya, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

16. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MK864265 (Gordonia phage Barb, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

17. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to NC_030913 (Gordonia phage Wizard, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

18. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to NC_042345 (Phage Salvo, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

19. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MN010760 (Gordonia phage Nubi, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

20. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to MT522003 (Microbacterium phage Rie18, complete genome) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

21. spacer 4.2|4036194|19|NC_016887|CRISPRCasFinder matches to LR743524 (Xylella phage Bacata genome assembly, chromosome: 1) position: , mismatch: 0, identity: 1.0

cgccgcgaagaaggctccg	CRISPR spacer
cgccgcgaagaaggctccg	Protospacer
*******************

22. spacer 2.2|3956417|31|NC_016887|CRISPRCasFinder,PILER-CR matches to MT657339 (Gordonia phage SpeedDemon, complete genome) position: , mismatch: 3, identity: 0.903

cagcggcgtcgatcttgttgggtgagtcggg	CRISPR spacer
ccgcggcgtcgatcttgcggggtgagtcggg	Protospacer
* ***************. ************

23. spacer 2.2|3956417|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NC_031074 (Gordonia phage Bantam, complete genome) position: , mismatch: 3, identity: 0.903

cagcggcgtcgatcttgttgggtgagtcggg	CRISPR spacer
ccgcggcgtcgatcttgcggggtgagtcggg	Protospacer
* ***************. ************

24. spacer 2.2|3956417|31|NC_016887|CRISPRCasFinder,PILER-CR matches to MN908691 (Gordonia phage DatBoi, complete genome) position: , mismatch: 3, identity: 0.903

cagcggcgtcgatcttgttgggtgagtcggg	CRISPR spacer
ccgcggcgtcgatcttgcggggtgagtcggg	Protospacer
* ***************. ************

25. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NC_014818 (Asticcacaulis excentricus CB 48 plasmid pASTEX01, complete sequence) position: , mismatch: 5, identity: 0.844

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
ttcggcctcacgctcgatgcggctggccgtgg	Protospacer
 ******** ****** ************.*.

26. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018829 (Asticcacaulis excentricus strain M6 plasmid pASEM-1, complete sequence) position: , mismatch: 5, identity: 0.844

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
ttcggcctcacgctcgatgcggctggccgtgg	Protospacer
 ******** ****** ************.*.

27. spacer 3.12|3959412|30|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134449 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 7, complete sequence) position: , mismatch: 5, identity: 0.833

gacggcaccaagttctactgcaccggctcg	CRISPR spacer
agcggcaccaagttctactccaccggcacc	Protospacer
..***************** ******* * 

28. spacer 2.2|3956417|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP021915 (Sagittula sp. P11 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.806

cagcggcgtcgatcttgttggg--tgagtcggg	CRISPR spacer
cagcggcggcgatcttgtcgggtttcagtcc--	Protospacer
******** *********.***  * ****   

29. spacer 2.2|3956417|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP010856 (Marinovum algicola DG 898 plasmid pMaD1, complete sequence) position: , mismatch: 6, identity: 0.806

cagcggcgtcgatcttgttggg--tgagtcggg	CRISPR spacer
cagcggcggcgatcttgtcgggtttcagtcc--	Protospacer
******** *********.***  * ****   

30. spacer 2.2|3956417|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP045373 (Sulfitobacter sp. THAF37 plasmid pTHAF37_a, complete sequence) position: , mismatch: 6, identity: 0.806

cagcggcgtcgatcttgttggg--tgagtcggg	CRISPR spacer
cagcggcggcgatcttgtcgggtttcagtct--	Protospacer
******** *********.***  * ****   

31. spacer 2.2|3956417|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP018081 (Sulfitobacter sp. AM1-D1 plasmid unnamed5, complete sequence) position: , mismatch: 6, identity: 0.806

cagcggcgtcgatcttgttggg--tgagtcggg	CRISPR spacer
cagcggcggcgatcttgtcgggtttcagtct--	Protospacer
******** *********.***  * ****   

32. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP032870 (Pseudomonas syringae pv. actinidiae strain P220 plasmid pLKQG722, complete sequence) position: , mismatch: 6, identity: 0.806

gccccggccgggttggtcggggcgccttgct--	CRISPR spacer
gccccggccgggttgggcgaggcagc--gctag	Protospacer
**************** **.***. *  ***  

33. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_KY362366 (Pseudomonas amygdali pv. tabaci strain 0893-29 plasmid pPt0893-29, complete sequence) position: , mismatch: 6, identity: 0.806

gccccggccgggttggtcggggcgccttgct--	CRISPR spacer
gccccggccgggttgggcgaggcagc--gctag	Protospacer
**************** **.***. *  ***  

34. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP032632 (Pseudomonas syringae pv. actinidiae str. Shaanxi_M228 plasmid pM228, complete sequence) position: , mismatch: 6, identity: 0.806

gccccggccgggttggtcggggcgccttgct--	CRISPR spacer
gccccggccgggttgggcgaggcagc--gctag	Protospacer
**************** **.***. *  ***  

35. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP011973 (Pseudomonas syringae pv. actinidiae ICMP 18884 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

gccccggccgggttggtcggggcgccttgct--	CRISPR spacer
gccccggccgggttgggcgaggcagc--gctag	Protospacer
**************** **.***. *  ***  

36. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP012180 (Pseudomonas syringae pv. actinidiae ICMP 18708 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

gccccggccgggttggtcggggcgccttgct--	CRISPR spacer
gccccggccgggttgggcgaggcagc--gctag	Protospacer
**************** **.***. *  ***  

37. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP019733 (Pseudomonas syringae pv. actinidiae strain CRAFRU 14.08 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

gccccggccgggttggtcggggcgccttgct--	CRISPR spacer
gccccggccgggttgggcgaggcagc--gctag	Protospacer
**************** **.***. *  ***  

38. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP017010 (Pseudomonas syringae pv. actinidiae strain NZ-47 plasmid pPsa22180a, complete sequence) position: , mismatch: 6, identity: 0.806

gccccggccgggttggtcggggcgccttgct--	CRISPR spacer
gccccggccgggttgggcgaggcagc--gctag	Protospacer
**************** **.***. *  ***  

39. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP017008 (Pseudomonas syringae pv. actinidiae strain ICMP 20586 plasmid pPsa20586, complete sequence) position: , mismatch: 6, identity: 0.806

gccccggccgggttggtcggggcgccttgct--	CRISPR spacer
gccccggccgggttgggcgaggcagc--gctag	Protospacer
**************** **.***. *  ***  

40. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP019731 (Pseudomonas syringae pv. actinidiae strain CRAFRU 12.29 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

gccccggccgggttggtcggggcgccttgct--	CRISPR spacer
gccccggccgggttgggcgaggcagc--gctag	Protospacer
**************** **.***. *  ***  

41. spacer 2.9|3956538|32|NC_016887|CRT matches to CP000664 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA03, complete sequence) position: , mismatch: 6, identity: 0.812

cgccccggccgggttggtcggggcgccttgct-	CRISPR spacer
cgccccggccggggaggtcgggg-gtcgtgcaa	Protospacer
*************  ******** *.* ***  

42. spacer 3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019603 (Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence) position: , mismatch: 6, identity: 0.812

tcgac-gtcgtcgatcatcgtgtccggcagcag	CRISPR spacer
-cgataatcgtcgatcaccgtgtccagcagcat	Protospacer
 ***. .**********.*******.****** 

43. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 6, identity: 0.812

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
ctcggcctcccgctcgctgcggctgatcctgc	Protospacer
 ************************..* .* 

44. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.812

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gtccgcctcccgctcgctgcggctgatcctgc	Protospacer
*** *********************..* .* 

45. spacer 3.12|3959412|30|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NC_019407 (Caulobacter phage CcrMagneto, complete genome) position: , mismatch: 6, identity: 0.8

gacggcaccaagttctactgcaccggctcg	CRISPR spacer
aacgtcaccaagttcgactgcaccgacgcc	Protospacer
.*** ********** *********.* * 

46. spacer 2.5|3956600|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 7, identity: 0.774

ttctgtccgacaccaacgtctacaaccgggc	CRISPR spacer
cgctgtccgacatcaacgtccacaacctgct	Protospacer
. **********.*******.****** * .

47. spacer 2.7|3956416|32|NC_016887|CRT matches to NZ_CP021915 (Sagittula sp. P11 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

acagcggcgtcgatcttgttggg--tgagtcggg	CRISPR spacer
gcagcggcggcgatcttgtcgggtttcagtcc--	Protospacer
.******** *********.***  * ****   

48. spacer 2.7|3956416|32|NC_016887|CRT matches to NZ_CP010856 (Marinovum algicola DG 898 plasmid pMaD1, complete sequence) position: , mismatch: 7, identity: 0.781

acagcggcgtcgatcttgttggg--tgagtcggg	CRISPR spacer
gcagcggcggcgatcttgtcgggtttcagtcc--	Protospacer
.******** *********.***  * ****   

49. spacer 2.7|3956416|32|NC_016887|CRT matches to NZ_CP045373 (Sulfitobacter sp. THAF37 plasmid pTHAF37_a, complete sequence) position: , mismatch: 7, identity: 0.781

acagcggcgtcgatcttgttggg--tgagtcggg	CRISPR spacer
gcagcggcggcgatcttgtcgggtttcagtct--	Protospacer
.******** *********.***  * ****   

50. spacer 2.7|3956416|32|NC_016887|CRT matches to NZ_CP018081 (Sulfitobacter sp. AM1-D1 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.781

acagcggcgtcgatcttgttggg--tgagtcggg	CRISPR spacer
gcagcggcggcgatcttgtcgggtttcagtct--	Protospacer
.******** *********.***  * ****   

51. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

----cgccccggccgggttggtcggggcgccttgct	CRISPR spacer
gaagcgc----gccgggatgggcggggcgccttgcc	Protospacer
    ***    ****** *** *************.

52. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

----cgccccggccgggttggtcggggcgccttgct	CRISPR spacer
gaagcgc----gccgggatgggcggggcgccttgcc	Protospacer
    ***    ****** *** *************.

53. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

----cgccccggccgggttggtcggggcgccttgct	CRISPR spacer
gaagcgc----gccgggatgggcggggcgccttgcc	Protospacer
    ***    ****** *** *************.

54. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

----cgccccggccgggttggtcggggcgccttgct	CRISPR spacer
gaagcgc----gccgggatgggcggggcgccttgcc	Protospacer
    ***    ****** *** *************.

55. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 7, identity: 0.781

----cgccccggccgggttggtcggggcgccttgct	CRISPR spacer
gaagcgc----gccgggatgggcggggcgccttgcc	Protospacer
    ***    ****** *** *************.

56. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

----cgccccggccgggttggtcggggcgccttgct	CRISPR spacer
gaagcgc----gccgggatgggcggggcgccttgcc	Protospacer
    ***    ****** *** *************.

57. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

----cgccccggccgggttggtcggggcgccttgct	CRISPR spacer
gaagcgc----gccgggatgggcggggcgccttgcc	Protospacer
    ***    ****** *** *************.

58. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

----cgccccggccgggttggtcggggcgccttgct	CRISPR spacer
gaagcgc----gccgggatgggcggggcgccttgcc	Protospacer
    ***    ****** *** *************.

59. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

----cgccccggccgggttggtcggggcgccttgct	CRISPR spacer
gaagcgc----gccgggatgggcggggcgccttgcc	Protospacer
    ***    ****** *** *************.

60. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

----cgccccggccgggttggtcggggcgccttgct	CRISPR spacer
gaagcgc----gccgggatgggcggggcgccttgcc	Protospacer
    ***    ****** *** *************.

61. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_KY362366 (Pseudomonas amygdali pv. tabaci strain 0893-29 plasmid pPt0893-29, complete sequence) position: , mismatch: 7, identity: 0.781

cgccccggccgggttggtcggggcgccttgct--	CRISPR spacer
ggccccggccgggttgggcgaggcagc--gctag	Protospacer
 **************** **.***. *  ***  

62. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP032632 (Pseudomonas syringae pv. actinidiae str. Shaanxi_M228 plasmid pM228, complete sequence) position: , mismatch: 7, identity: 0.781

cgccccggccgggttggtcggggcgccttgct--	CRISPR spacer
ggccccggccgggttgggcgaggcagc--gctag	Protospacer
 **************** **.***. *  ***  

63. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP011973 (Pseudomonas syringae pv. actinidiae ICMP 18884 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cgccccggccgggttggtcggggcgccttgct--	CRISPR spacer
ggccccggccgggttgggcgaggcagc--gctag	Protospacer
 **************** **.***. *  ***  

64. spacer 2.9|3956538|32|NC_016887|CRT matches to NC_008043 (Ruegeria sp. TM1040 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.781

cgccccggccgggttggtcggg----gcgccttgct	CRISPR spacer
cgccccggccggaatggtcgggggctgcgcat----	Protospacer
************. ********    **** *    

65. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP032870 (Pseudomonas syringae pv. actinidiae strain P220 plasmid pLKQG722, complete sequence) position: , mismatch: 7, identity: 0.781

cgccccggccgggttggtcggggcgccttgct--	CRISPR spacer
ggccccggccgggttgggcgaggcagc--gctag	Protospacer
 **************** **.***. *  ***  

66. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP012180 (Pseudomonas syringae pv. actinidiae ICMP 18708 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cgccccggccgggttggtcggggcgccttgct--	CRISPR spacer
ggccccggccgggttgggcgaggcagc--gctag	Protospacer
 **************** **.***. *  ***  

67. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP019733 (Pseudomonas syringae pv. actinidiae strain CRAFRU 14.08 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cgccccggccgggttggtcggggcgccttgct--	CRISPR spacer
ggccccggccgggttgggcgaggcagc--gctag	Protospacer
 **************** **.***. *  ***  

68. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP017010 (Pseudomonas syringae pv. actinidiae strain NZ-47 plasmid pPsa22180a, complete sequence) position: , mismatch: 7, identity: 0.781

cgccccggccgggttggtcggggcgccttgct--	CRISPR spacer
ggccccggccgggttgggcgaggcagc--gctag	Protospacer
 **************** **.***. *  ***  

69. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP017008 (Pseudomonas syringae pv. actinidiae strain ICMP 20586 plasmid pPsa20586, complete sequence) position: , mismatch: 7, identity: 0.781

cgccccggccgggttggtcggggcgccttgct--	CRISPR spacer
ggccccggccgggttgggcgaggcagc--gctag	Protospacer
 **************** **.***. *  ***  

70. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP019731 (Pseudomonas syringae pv. actinidiae strain CRAFRU 12.29 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cgccccggccgggttggtcggggcgccttgct--	CRISPR spacer
ggccccggccgggttgggcgaggcagc--gctag	Protospacer
 **************** **.***. *  ***  

71. spacer 2.10|3956599|32|NC_016887|CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 7, identity: 0.781

attctgtccgacaccaacgtctacaaccgggc	CRISPR spacer
acgctgtccgacatcaacgtccacaacctgct	Protospacer
*. **********.*******.****** * .

72. spacer 3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to MN657133 (Cryobacterium sp. strain ANT_H10B plasmid pA10BH1, complete sequence) position: , mismatch: 7, identity: 0.781

tcgacgtcgtcgatcatcgtgtc--cggcagcag	CRISPR spacer
ccgacgtggtcgatcatcgcgtccacggcgcc--	Protospacer
.****** ***********.***  ****. *  

73. spacer 3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to HQ332141 (Halorubrum phage CGphi46 genomic sequence) position: , mismatch: 7, identity: 0.781

tcgacgtcgtcgatcatcgtgtccggcagcag-	CRISPR spacer
tcgacgtcgtcgacgatcgtgt-cggcgccgac	Protospacer
*************. ******* ****. *.. 

74. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
ctcggcctcccgctcgctgcgcctgatcctgc	Protospacer
 ******************** ***..* .* 

75. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gtccgcctcccgctcgctgcgcctgatcctgc	Protospacer
*** ***************** ***..* .* 

76. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NC_012718 (Burkholderia glumae BGR1 plasmid bglu_2p, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcgcgcgccccgctcgctgcggatcgccgcga	Protospacer
*.  ** .************** * *******

77. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009433 (Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_1, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcgcgcgccccgctcgctgcggatcgccgcga	Protospacer
*.  ** .************** * *******

78. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
ctcgcagtcccgctggctgcggctgcccgcgc	Protospacer
 ***   ******* ********** ***** 

79. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045091 (Burkholderia glumae strain GX plasmid pWSGX3, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcgcgcgccccgctcgctgcggatcgccgcga	Protospacer
*.  ** .************** * *******

80. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035000 (Rhizobium acidisoli strain FH23 plasmid pRapFH23b, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
ctcgcagtcccgctggctgcggctgcccgcgc	Protospacer
 ***   ******* ********** ***** 

81. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga-	CRISPR spacer
ctgggcctccggctcgccgcggctgg-agcgct	Protospacer
 * ******* ******.********  ***  

82. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga-	CRISPR spacer
ctgggcctccggctcgccgcggctgg-agcgct	Protospacer
 * ******* ******.********  ***  

83. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga-	CRISPR spacer
ctgggcctccggctcgccgcggctgg-agcgct	Protospacer
 * ******* ******.********  ***  

84. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcct--cccgctcgctgcggctggccgcga	CRISPR spacer
--cagcgtgacccgctcgctgcggctgggcacgc	Protospacer
  *.** *  ****************** *.** 

85. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga-	CRISPR spacer
ctgggcctccggctcgccgcggctgg-agcgct	Protospacer
 * ******* ******.********  ***  

86. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga-	CRISPR spacer
ctgggcctccggctcgccgcggctgg-agcgct	Protospacer
 * ******* ******.********  ***  

87. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga-	CRISPR spacer
ctgggcctccggctcgccgcggctgg-agcgct	Protospacer
 * ******* ******.********  ***  

88. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga-	CRISPR spacer
ctgggcctccggctcgccgcggctgg-agcgct	Protospacer
 * ******* ******.********  ***  

89. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga-	CRISPR spacer
ctgggcctccggctcgccgcggctgg-agcgct	Protospacer
 * ******* ******.********  ***  

90. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga-	CRISPR spacer
ctgggcctccggctcgccgcggctgg-agcgct	Protospacer
 * ******* ******.********  ***  

91. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga-	CRISPR spacer
ctgggcctccggctcgccgcggctgg-agcgct	Protospacer
 * ******* ******.********  ***  

92. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga-	CRISPR spacer
ctgggcctccggctcgccgcggctgg-agcgct	Protospacer
 * ******* ******.********  ***  

93. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga-	CRISPR spacer
ctgggcctccggctcgccgcggctgg-agcgct	Protospacer
 * ******* ******.********  ***  

94. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtcggcctcccgctcgctgcggctggccgcga-	CRISPR spacer
ctgggcctccggctcgccgcggctgg-agcgct	Protospacer
 * ******* ******.********  ***  

95. spacer 3.6|3959046|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022747 (Sphingobium hydrophobicum strain C1 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

atggcggtgatgacagcgtggcggg-cgtcgag	CRISPR spacer
ccggcggggatgaccgcgtggcgggccagcga-	Protospacer
 .***** ****** ********** *. *** 

96. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050093 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

97. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050082 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

98. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050099 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

99. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NC_008384 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

100. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025014 (Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

101. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049732 (Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

102. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053441 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

103. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018230 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

104. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025508 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

105. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016289 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

106. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048282 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248d, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

107. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013516 (Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacctcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

108. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054023 (Rhizobium sp. JKLM12A2 plasmid pPR12A202, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

109. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022667 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

110. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054033 (Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

111. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053208 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

112. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050087 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence) position: , mismatch: 7, identity: 0.781

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcc	Protospacer
. ** .*********.********** ***.*

113. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013553 (Rhizobium phaseoli strain N931 plasmid pRphaN931a, complete sequence) position: , mismatch: 7, identity: 0.781

-cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tctgcgcc-ttgtcggtgccgaccttgccggtc	Protospacer
 * .*.** .******** ********* ****

114. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013538 (Rhizobium phaseoli strain R630 plasmid pRphaR630a, complete sequence) position: , mismatch: 7, identity: 0.781

-cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tctgcgcc-ttgtcggtgccgaccttgccggtc	Protospacer
 * .*.** .******** ********* ****

115. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013564 (Rhizobium phaseoli strain N831 plasmid pRphaN831a, complete sequence) position: , mismatch: 7, identity: 0.781

-cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tctgcgcc-ttgtcggtgccgaccttgccggtc	Protospacer
 * .*.** .******** ********* ****

116. spacer 3.12|3959412|30|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.767

gacggcaccaagttctactgcaccggctcg	CRISPR spacer
aatggcaccaagtactacagcaccggtggg	Protospacer
.*.********** **** *******.  *

117. spacer 3.12|3959412|30|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 7, identity: 0.767

gacggcaccaagttctactgcaccggctcg	CRISPR spacer
aatggcaccaagtactacagcaccggtggg	Protospacer
.*.********** **** *******.  *

118. spacer 2.1|3956356|31|NC_016887|CRISPRCasFinder matches to MH617110 (Microviridae sp. isolate ctdb208, complete genome) position: , mismatch: 8, identity: 0.742

gtgagtacctggtgttgttcgagcatgctca	CRISPR spacer
cgtagtacctggtgttgttggaacatccgaa	Protospacer
   **************** **.*** *  *

119. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

gccccggccgggttggtcggggcgccttgct	CRISPR spacer
aagcgcgccgggatgggcggggcgccttgcc	Protospacer
.  *  ****** *** *************.

120. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

gccccggccgggttggtcggggcgccttgct	CRISPR spacer
aagcgcgccgggatgggcggggcgccttgcc	Protospacer
.  *  ****** *** *************.

121. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 8, identity: 0.742

gccccggccgggttggtcggggcgccttgct	CRISPR spacer
aagcgcgccgggatgggcggggcgccttgcc	Protospacer
.  *  ****** *** *************.

122. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

gccccggccgggttggtcggggcgccttgct	CRISPR spacer
aagcgcgccgggatgggcggggcgccttgcc	Protospacer
.  *  ****** *** *************.

123. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

gccccggccgggttggtcggggcgccttgct	CRISPR spacer
aagcgcgccgggatgggcggggcgccttgcc	Protospacer
.  *  ****** *** *************.

124. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.742

gccccggccgggttggtcggggcgccttgct	CRISPR spacer
aagcgcgccgggatgggcggggcgccttgcc	Protospacer
.  *  ****** *** *************.

125. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.742

gccccggccgggttggtcggggcgccttgct	CRISPR spacer
aagcgcgccgggatgggcggggcgccttgcc	Protospacer
.  *  ****** *** *************.

126. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.742

gccccggccgggttggtcggggcgccttgct	CRISPR spacer
aagcgcgccgggatgggcggggcgccttgcc	Protospacer
.  *  ****** *** *************.

127. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.742

gccccggccgggttggtcggggcgccttgct	CRISPR spacer
aagcgcgccgggatgggcggggcgccttgcc	Protospacer
.  *  ****** *** *************.

128. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.742

gccccggccgggttggtcggggcgccttgct	CRISPR spacer
aagcgcgccgggatgggcggggcgccttgcc	Protospacer
.  *  ****** *** *************.

129. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to CP054917 (Streptomyces sp. NA02950 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

gccccggccgggttggtcggggcgccttgct	CRISPR spacer
gccccggccgggtgggccggggctgccagga	Protospacer
************* **.******  *. *  

130. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_KY349138 (Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_2, complete sequence) position: , mismatch: 8, identity: 0.742

gccccggccgggttggtcggggcgccttgct	CRISPR spacer
accccggccgggttggtggggccgtacgcct	Protospacer
.**************** *** **. .  **

131. spacer 2.5|3956600|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP021356 (Rhodococcus sp. S2-17 plasmid pRB29, complete sequence) position: , mismatch: 8, identity: 0.742

ttctgtccgacaccaacgtctacaaccgggc	CRISPR spacer
tggtcatcgacaacgacgtctacaaccgggt	Protospacer
*  *  .***** *.***************.

132. spacer 3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 8, identity: 0.75

tcgacgtcgtcgatcatcgtgtccggcagcag	CRISPR spacer
accgcgtcggcgatcatcgcgtccggcacccc	Protospacer
 * .***** *********.******** *  

133. spacer 3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 8, identity: 0.75

tcgacgtcgtcgatcatcgtgtccggcagcag	CRISPR spacer
accgcgtcggcgatcatcgcgtccggcacccc	Protospacer
 * .***** *********.******** *  

134. spacer 3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009293 (Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence) position: , mismatch: 8, identity: 0.75

tcgacgtcgtcgatcatcgtgtcc--ggcagcag	CRISPR spacer
acgacgtcgtcgatcagcgtggccttgtcgac--	Protospacer
 *************** **** **  * *..*  

135. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gagctcttcccgctcgctgcggccggcggcgt	Protospacer
*    *.****************.*** *** 

136. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
ctcggcttcccgctcgctgcgcctgatcctgc	Protospacer
 *****.************** ***..* .* 

137. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.75

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
ctcggcttcccgctcgctgcgcctgatcctgc	Protospacer
 *****.************** ***..* .* 

138. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.75

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
ctcggcttcccgctcgctgcgcctgatcctgc	Protospacer
 *****.************** ***..* .* 

139. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 8, identity: 0.75

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
ctcggcttcccgctcgctgcgcctgatcctgc	Protospacer
 *****.************** ***..* .* 

140. spacer 3.6|3959046|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY000056 (Agrobacterium vitis strain Tun201 plasmid pTi_Tun201, complete sequence) position: , mismatch: 8, identity: 0.75

atggcggtgatgacagcgtggcgggcgtcgag	CRISPR spacer
gcgccggtgatgacagcctggctggcgatgat	Protospacer
..* ************* **** **** .** 

141. spacer 3.6|3959046|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY000060 (Agrobacterium tumefaciens strain CFBP2407 plasmid pTi_CFBP2407, complete sequence) position: , mismatch: 8, identity: 0.75

atggcggtgatgacagcgtggcgggcgtcgag	CRISPR spacer
gcgccggtgatgacagcctggctggcgatgat	Protospacer
..* ************* **** **** .** 

142. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030764 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggcg	Protospacer
. ** .*********.********** ***. 

143. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022566 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK02, complete sequence) position: , mismatch: 8, identity: 0.75

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcacttcgctgtcggcgacgaccttgagggct	Protospacer
. ** .*********.********** ***..

144. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to MK460245 (Streptomyces phage BartholomewSD, complete genome) position: , mismatch: 8, identity: 0.75

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
cctgagcgcggtcggtgacgacctcgcggtcc	Protospacer
*   * *** **************.**** .*

145. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to MN234208 (Streptomyces phage Alvy, complete genome) position: , mismatch: 8, identity: 0.75

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
cctgagcgcggtcggtgacgacctcgcggtcc	Protospacer
*   * *** **************.**** .*

146. spacer 3.12|3959412|30|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044987 (Deinococcus sp. AJ005 plasmid p96k, complete sequence) position: , mismatch: 8, identity: 0.733

gacggcaccaagttctactgcaccggctcg	CRISPR spacer
ttcggcaccaagttctacggcgccggtctc	Protospacer
  **************** **.****... 

147. spacer 3.12|3959412|30|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 8, identity: 0.733

gacggcaccaagttctactgcaccggctcg	CRISPR spacer
tcgggcaccaagatctactccaccggcagt	Protospacer
   ********* ****** *******   

148. spacer 2.1|3956356|31|NC_016887|CRISPRCasFinder matches to NZ_CP039426 (Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.71

gtgagtacctggtgttgttcgagcatgctca	CRISPR spacer
tccaggacctggtggtgttcgagcatttgcg	Protospacer
 . ** ******** *********** . *.

149. spacer 2.1|3956356|31|NC_016887|CRISPRCasFinder matches to NZ_CP039431 (Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.71

gtgagtacctggtgttgttcgagcatgctca	CRISPR spacer
tccaggacctggtggtgttcgagcatttgcg	Protospacer
 . ** ******** *********** . *.

150. spacer 2.1|3956356|31|NC_016887|CRISPRCasFinder matches to MK524505 (Gordonia phage Dogfish, complete genome) position: , mismatch: 9, identity: 0.71

gtgagtacctggtgttgttcgagcatgctca	CRISPR spacer
aggccgacctggtggtggtcgagcatgcttg	Protospacer
. *   ******** ** ***********..

151. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP030863 (Streptomyces globosus strain LZH-48 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

gccccggccgggttggtcggggcgccttgct	CRISPR spacer
gccccggccggggcggtcggggcgaaggagc	Protospacer
************ .**********    . .

152. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to MH651171 (Mycobacterium phage Collard, complete genome) position: , mismatch: 9, identity: 0.71

gccccggccgggttggtcggggcgccttgct	CRISPR spacer
gagccggccgtgttggtcggtgcgccggaac	Protospacer
*  ******* ********* *****  . .

153. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NC_028947 (Mycobacterium phage Kratio, complete genome) position: , mismatch: 9, identity: 0.71

gccccggccgggttggtcggggcgccttgct	CRISPR spacer
gagccggccgtgttggtcggtgcgccggaac	Protospacer
*  ******* ********* *****  . .

154. spacer 2.4|3956539|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_CP018784 (Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence) position: , mismatch: 9, identity: 0.71

gccccggccgggttggtcggggcgccttgct	CRISPR spacer
aagccggccgggatggtccgggcgccggacg	Protospacer
.  ********* ***** *******  .* 

155. spacer 2.5|3956600|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.71

ttctgtccgacaccaacgtctacaaccgggc	CRISPR spacer
gggagcacgacaccaacgtctactaccggcg	Protospacer
    *. **************** *****  

156. spacer 2.6|3956355|32|NC_016887|CRT matches to NZ_CP039426 (Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ggtgagtacctggtgttgttcgagcatgctca	CRISPR spacer
gtccaggacctggtggtgttcgagcatttgcg	Protospacer
* . ** ******** *********** . *.

157. spacer 2.6|3956355|32|NC_016887|CRT matches to NZ_CP039431 (Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ggtgagtacctggtgttgttcgagcatgctca	CRISPR spacer
gtccaggacctggtggtgttcgagcatttgcg	Protospacer
* . ** ******** *********** . *.

158. spacer 2.6|3956355|32|NC_016887|CRT matches to MH617110 (Microviridae sp. isolate ctdb208, complete genome) position: , mismatch: 9, identity: 0.719

ggtgagtacctggtgttgttcgagcatgctca	CRISPR spacer
acgtagtacctggtgttgttggaacatccgaa	Protospacer
.   **************** **.*** *  *

159. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_KY349138 (Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_2, complete sequence) position: , mismatch: 9, identity: 0.719

cgccccggccgggttggtcggggcgccttgct	CRISPR spacer
gaccccggccgggttggtggggccgtacgcct	Protospacer
 .**************** *** **. .  **

160. spacer 2.9|3956538|32|NC_016887|CRT matches to CP054917 (Streptomyces sp. NA02950 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgccccggccgggttggtcggggcgccttgct	CRISPR spacer
agccccggccgggtgggccggggctgccagga	Protospacer
 ************* **.******  *. *  

161. spacer 2.10|3956599|32|NC_016887|CRT matches to NZ_CP021356 (Rhodococcus sp. S2-17 plasmid pRB29, complete sequence) position: , mismatch: 9, identity: 0.719

attctgtccgacaccaacgtctacaaccgggc	CRISPR spacer
ttggtcatcgacaacgacgtctacaaccgggt	Protospacer
 *  *  .***** *.***************.

162. spacer 2.10|3956599|32|NC_016887|CRT matches to NC_042091 (Pseudomonas phage nickie, complete genome) position: , mismatch: 9, identity: 0.719

attctgtc--cgacaccaacgtctacaaccgggc	CRISPR spacer
--tccactgacgacaccaacgtcagcaaccgggt	Protospacer
  **....  ************* .********.

163. spacer 3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022424 (Vitreoscilla filiformis strain ATCC 15551 plasmid pVF1, complete sequence) position: , mismatch: 9, identity: 0.719

tcgacgtcgtcgatcatcgtgtccggcagcag	CRISPR spacer
tcgacgtcgtccatcatggtgtcgatgatttg	Protospacer
*********** ***** ***** .  * . *

164. spacer 3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to MK937597 (Gordonia phage Spooky, complete genome) position: , mismatch: 9, identity: 0.719

tcgacgtcgtcgatcatcgtgtccggcagcag	CRISPR spacer
tcgacgttgtccatcatcgtgtctcggctcgc	Protospacer
*******.*** ***********. *   *. 

165. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

166. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

167. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

168. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

169. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

170. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

171. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

172. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

173. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

174. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

175. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

176. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

177. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

178. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

179. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

180. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

181. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

182. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
gcacaccttgcgctcgctgcggctggccgatg	Protospacer
*.  .***. *******************  .

183. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.719

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
cgcgtcctcccgctcgctgcggatgatcctgc	Protospacer
  ** ***************** **..* .* 

184. spacer 3.6|3959046|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 9, identity: 0.719

atggcggtgatgacagcgtggcgggcgtcgag	CRISPR spacer
agcctggtgatgacagagtcgcgggcgtgagg	Protospacer
*   .*********** ** ******** ..*

185. spacer 3.7|3959107|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009865 (Klebsiella pneumoniae subsp. pneumoniae strain KPNIH29 plasmid pKPN-80a, complete sequence) position: , mismatch: 9, identity: 0.719

tcgggaggcccgcagccataccccggtcagtt	CRISPR spacer
taaggatggccgcagccataccccggatgagt	Protospacer
* .*** * ***************** ... *

186. spacer 3.8|3959168|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

tgacacggccatcgagtcgaggaccgatgcca	CRISPR spacer
ccccacggccagcgagtcgaggcccgcccccg	Protospacer
.  ******** ********** *** . **.

187. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 9, identity: 0.719

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcgtttcgctgtcggcgacgaccttgagggcc	Protospacer
. .. .*********.********** ***.*

188. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054029 (Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence) position: , mismatch: 9, identity: 0.719

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tcgtttcgctgtcggcgacgaccttgagggcc	Protospacer
. .. .*********.********** ***.*

189. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to CP007642 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803a, complete sequence) position: , mismatch: 9, identity: 0.719

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tctgttcgctgtcggcgacgaccttgagggcc	Protospacer
.    .*********.********** ***.*

190. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to MN304822 (Phage 64_12, partial genome) position: , mismatch: 9, identity: 0.719

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
cccggccgctgtcggtcatgaccttgcggacg	Protospacer
*   .*********** *.**********.. 

191. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tctcgcggctgtcgatgacggccttgcgggca	Protospacer
.  *.* *******.*****.*********. 

192. spacer 2.5|3956600|31|NC_016887|CRISPRCasFinder,PILER-CR matches to NC_042091 (Pseudomonas phage nickie, complete genome) position: , mismatch: 10, identity: 0.677

ttctgtccgacaccaacgtctacaaccgggc	CRISPR spacer
ccactgacgacaccaacgtcagcaaccgggt	Protospacer
.. .   ************* .********.

193. spacer 2.6|3956355|32|NC_016887|CRT matches to MK524505 (Gordonia phage Dogfish, complete genome) position: , mismatch: 10, identity: 0.688

ggtgagtacctggtgttgttcgagcatgctca	CRISPR spacer
caggccgacctggtggtggtcgagcatgcttg	Protospacer
 . *   ******** ** ***********..

194. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP030863 (Streptomyces globosus strain LZH-48 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cgccccggccgggttggtcggggcgccttgct	CRISPR spacer
tgccccggccggggcggtcggggcgaaggagc	Protospacer
.************ .**********    . .

195. spacer 2.9|3956538|32|NC_016887|CRT matches to NZ_CP018784 (Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence) position: , mismatch: 10, identity: 0.688

cgccccggccgggttggtcggggcgccttgct	CRISPR spacer
gaagccggccgggatggtccgggcgccggacg	Protospacer
 .  ********* ***** *******  .* 

196. spacer 2.9|3956538|32|NC_016887|CRT matches to MH651171 (Mycobacterium phage Collard, complete genome) position: , mismatch: 10, identity: 0.688

cgccccggccgggttggtcggggcgccttgct	CRISPR spacer
agagccggccgtgttggtcggtgcgccggaac	Protospacer
 *  ******* ********* *****  . .

197. spacer 2.9|3956538|32|NC_016887|CRT matches to NC_028947 (Mycobacterium phage Kratio, complete genome) position: , mismatch: 10, identity: 0.688

cgccccggccgggttggtcggggcgccttgct	CRISPR spacer
agagccggccgtgttggtcggtgcgccggaac	Protospacer
 *  ******* ********* *****  . .

198. spacer 3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020041 (Streptomyces sp. 3211 isolate 3 plasmid p3211-2, complete sequence) position: , mismatch: 10, identity: 0.688

tcgacgtcgtcgatcatcgtgtccggcagcag	CRISPR spacer
ggtaggtcgacgatcagcgtgtccggcacggc	Protospacer
   * **** ****** ***********  . 

199. spacer 3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010408 (Streptomyces vietnamensis strain GIMV4.0001 plasmid pSVL1, complete sequence) position: , mismatch: 10, identity: 0.688

tcgacgtcgtcgatcatcgtgtccggcagcag	CRISPR spacer
ggcaggtcgacgatcagcgtgtccggcacggc	Protospacer
   * **** ****** ***********  . 

200. spacer 3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015530 (Rhodococcus sp. WB1 plasmid pWB1, complete sequence) position: , mismatch: 10, identity: 0.688

tcgacgtcgtcgatcatcgtgtccggcagcag	CRISPR spacer
cagacgtcgtcgatcatcttctccgccctgcc	Protospacer
. **************** * **** *     

201. spacer 3.4|3958924|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to MN096370 (Gordonia phage Squiddly, complete genome) position: , mismatch: 10, identity: 0.688

tcgacgtcgtcgatcatcgtgtccggcagcag	CRISPR spacer
tcgacgttgtccatcatcgtgtctcggcttgc	Protospacer
*******.*** ***********. *   .. 

202. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 10, identity: 0.688

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
acacggttcccgctcgctgcggccgcccgcct	Protospacer
..  * .****************.* ****  

203. spacer 3.5|3958985|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 10, identity: 0.688

gtcggcctcccgctcgctgcggctggccgcga	CRISPR spacer
tgcggcgtcgcgctcgctgcggctgatgctgc	Protospacer
  **** ** ***************..  .* 

204. spacer 3.6|3959046|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012254 (Cronobacter sakazakii strain NCTC 8155 plasmid pCS1, complete sequence) position: , mismatch: 10, identity: 0.688

atggcggtgatgacagcgtggcgggcgtcgag	CRISPR spacer
cctctgtagatgacagtgtggcggccgtcgaa	Protospacer
 .  .*  ********.******* ******.

205. spacer 3.9|3959229|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021126 (Rhizobium sp. Kim5 plasmid pRetKim5b, complete sequence) position: , mismatch: 10, identity: 0.688

cgacaccgctgtcggtgacgaccttgcgggtc	CRISPR spacer
tctgttcgctgtcggcgacgaccttgagggcg	Protospacer
.    .*********.********** ***. 

206. spacer 3.11|3959351|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015269 (Mycobacterium chimaera strain ZUERICH-2 plasmid unnamed 2, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgtgtcgctgctgtcgacgatgaggtccac	CRISPR spacer
tagaagtcgatgttgtcgacgatgaggtagag	Protospacer
 . . **** **.***************  * 

207. spacer 3.11|3959351|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033574 (Shewanella algae strain KC-Na-R1 plasmid pKC-Na-R1, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgtgtcgctgctgtcgacgatgaggtccac	CRISPR spacer
aaaaggaagctgctgtcgatgatgtggtccaa	Protospacer
.. . *  ***********.**** ****** 

208. spacer 3.11|3959351|32|NC_016887|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016463 (Bosea sp. RAC05 plasmid pBSY19_1, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgtgtcgctgctgtcgacgatgaggtccac	CRISPR spacer
ccggtgtcgatgctgtcgtcgatgagcaggat	Protospacer
   ****** ******** *******    *.

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	4496420 : 4506826	8	Bacillus_phage(33.33%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NC_016887|4496420:4506826|DBSCAN-SWA
CTCACAACTGCGGTAGATAGCTGATCTGCACCAGTTCCGGGGGGCGGGAGCGGGTGACGTAGGTGCCGCGGCCTGGGGGTTGGGGGGTGGGGCGGATGTTGGCGAGGAGGGTGCCCTCTTCGGGGGAACCGCTGAGGACCACGCCGTCGACGCCGAGGTCGCGCAGGCGGCCGAGGACGGGGTCGTGCAGGGCGAGGGTGGCGCCGGCGCCGGCGCGGGCGATGATCACGTGCAGGCCGATGTCGTGGCCGTGGGCGAGGTATTCGGCCAAGGGGGCGAGGGGGTTGCCGGTGGCGGCGGCGCAGACGCGTTCGTAGTCGTCGACGATGACGAACAGTTCCGGGCCCTGCCACCAGCTGCGTTCCCGCAGTTGCTGCGGGGAGATCTCCGGGCCCGCGCTGCGGTTGTCGATGAACTGCACGACCGAATCGACCGCCTCGGTGATCGCTTGCGGTGACGGCGCGTAGCGCGCGACCTGCGGCAGACCGGCCGAGAGGTCGAGCAGGCGGCGCGCCGGGTCGATGATGACGATGGCCGCCTCGTCCTCGGTGGCCGAGCGCCCGATCCCGTCGAGGATGTTGCCCAGCAGCGTGGTCTTCCCGGATTCGGCCTCACCGAACACCATCAGATGCGGTTGCTTCGCGAAATCCAGCACCAGCGGGGAAAGATCACTGGCCCGCAGCCCCACCACCACCTGCCGAGCGCTCTGCTCGATACCCTCGGCCTCCGCGATCGCCAGCACGTTCTCGCGGGCCACGCGCATCGGCAGCGCCCGCACCTCCGGTGCCCGCCGGCCCGGATACCGTTGTGCCAGCATGCGCGCCGAGGACAGCAGATCACCGCCCGACCCGCCCAACTGGGCCGGTGCCGCCAGCCGCGGCACGGCGATCATCATGGCCTTGATCGCCGCCCCGGCACGGATCACACCGCGTCCAGGAATGCTCGGAACCCGGGCGGCATCGTTCTTGTTGAACTCCGATTCGCTCGGATCGTCCAGGCGCAGTTCGAGTTTGGTGCCGAACCGTTCCCGGAAGGGCGGGCGCAGATGTGCCCAGCGCACCGCCGAGATGATGACGTGCACGCCGTAGCCGAGCCCGTCGGCGGTCAGGTCGATGAGTTGTTGTTCCAGGCCCTCGTCGTGGCGGCGGGCGTAGCCCCAGTCGTCGACGACGAGGAACACATCGCCGAAGTCCTCGGCCCGCACCGGATCCGACGCCATATCCCGCCGCCGGCGAAACTCCGCCATCGAACCGATGCCCAGTTCGGCGAAGCGGTATCGCCGGGCGGTGAGCACGGCCATCACCTCGGCGACGGTGCGCCGGATCCGGTCCGGCTCATGGCGTCCCACCACCGCACCCACGTGCGGAATCTGCTCCAGATCACCCAGCGTCCCACCGGTGTCGAGCACGTAGAACTGCACCTGTTCGGGAGTGTGGGTGGCCGCGGCGGACAGCACGATCGTCGCCAGCGCCGTCGATTTCCCGGCCCGCGTCCCGCCGACCACCGCGACGTTGCCGCCCTCACCGCCCAGCGACAGCACCAACGCCCGCTGCGCCTGCTCGAACGGATCGTCGACCACCCCGACCGGCAGTTCCAGCCTGCCGAATCCGCCGGGCGCCCATCGGTGGTCGCTGAGCAACTCCTGCACCGTCGCGGGTTCCGCCAGCGGTGGCAGCCAGATCCGGCGGGCCGGCTCACCGGCGGCCCGTACCTGCGCGACCAGCGAGTCCAGCAGTGTCCGCTGCACACCGCGCGTCTCGGGCTCCTGGTCGTGCCGCCGCTCCGGGCGGGCGAGGTAGGCCGTTTTGAACCGGATGGGCGCGGCGGCATCGGCTTTCAGGTAGGCGAAACCGGGCGTGCTCGGCAGTTCGTAGGCGTCGGGCACACCCAGCACCATCCGCGATTCGGCCGCGGAGAACATGCGCAGCCCGATCCGGAACGATAGATACGCCTCGAACGGCCCGAGCCGATAGCCTTCGAGCCGCGCCGACGACAACAGCAGATGCAGCCCGAGCGCCCGGCCACGGCGCGCGATCGCGACCAAGGTGTCGCCGAAATCCGGTTTCTGCGCGAGCAATTCGGTGAACTCGTCGATCACCAGCACCAGCGCGGGCAGCGGCGCGAGATCGCGACCACGGCGGCGCGCGGATTCGTAGGCGGCGATATCGGCGAAGTTGTGCCTGCGCAACATCTGCCTGCGGCGTTCGATCTCCCCCGCCAGCGTCGCCATCAGCCGATCCACCAGCGGCAACTCCGCGGCGAGCGCGTTGACCACCGCCGACACGTGCGGCAGCGGCCCGAGCCCGTCGAAGGTCTCGCTGCCGCGGAAGTCGACGAGCAGGAAGTTCACCGCCTCCGGCGGATGGGTGACGGCCAGCCCCAGCACGATGTCCTTGAGCAGCATCGACTTACCGGACCCGGCGGCGCCGACCACCAGCCCGTACTGCCCCATCCCCGATTCGCCGACCTGCTTCAGATCCAGCTCCACCGTCTCCCCCAGGTGGGTGACGCCGATCGGGATGCGCAGCCGCTCGTGTTTGGAACGATGCTGCCAGGCCACCTCGAGGTCGAGCCGGTCGTCGGCGCCGATCCCGAACAGGTCGGCGAAATCGACATTGCCGTCGAAGGACGGGCGCCGGGTCTCGCCGTCGGCCGGACGGGCCGGCCAGGCCGCCGCCACCCGGCTCACCAGTTCGGCGGCGCCGTCGGCCAGATCGGGCAGCACCATCTTGTCCGGTGGCAGCTCCCGCAGGTCGGGCATGGCGATGCGGAACGGACGCCCCCGATAGAGGGCCCAGCCGGGTCCGTCGGGCAGCCGCGCGGCCCGTTCGGCATGGATGCGCGATTCGTGCGGGCGATGCAACCGCAGCTCGATATGCGACGGCAGCAGATCGGCCAGCCAGTCCGGCGCCTCACTCCAGTCGCGCACGGTCGCCACCACATGCACGCCGTATTCCGGGCCGGCACTGGCCACTTGCCGCAGGATCGCCGCGAAATCCGGGATCTGCTCGCAGAAATCGCCCCACCGGTCCAGCAGCAGGAAGATGTCGGCGGCGGGCCCGCCGACCAGCACCGACCGCGCCGCGCGCAGACTGGCCGGTGAGTCGATGTTGTTGGCGCGGTACATCTTCTTGCGGGACCGGATCTCGGCGACGATGGTTTGCAGCAGCGACAGCACCTCTTCGGGTTCGTCGTCGCCCGCTACCCCGGCGATATGCGGCAGCGCCCCCATCGAGCCGAGCCGGTTGCTCGATTCCAGGACATAGATCTGCGCTTCATCGGGTGCGTGGGTGAGCGCCAGCGATCCGGTGAGCGTGCGCAGCAGCGTGCTCTTACCCGCGCCCGCGCGGCCGACCACGAGCAAGTTGCCATCCGGGCCCGCGAGATCGAGCCAGACCGTCTCCCCCGCCGCGCCGTCGGTCCGGCGCTCCTGCCCGACCGGCACCTTCAATCGCCCGGTGCCCCACCAGGCTTCGGCGCGCAGCCCGAGCGTGGCGTCCTGTTCGAGCCGTCCGAGCAGCCCACCGAGCTGCACCCGATCGCCCACCTCGACCGCGCCCGGATGCCTGCGCCGCACCTTGGCGATATACACCTCGTCCTTGAGCAGGCCGTAGTGATTCGGGGTCTGTCTGCTGGTGCGGCTGCGCACTTCGGCGAGGGTGTAGGTCCACAGGTCGTGGGCACTGATGCGGCCGCTGCCGTTGTCGGCCAGGCCGGTGCCGATGCCCTTGACCATGGCGGCGGTGAAGATCGACAGCGGCGCGGATTGATCGGCGCCGCCGCGCCCGTCCTCGGCGGTTTCCACCGCGCTGGTGGCGGTGAGCACGCAGATGCCCTCGCCGGCGGCGAGTTCCTGGCCGACGTCGTCGATGGTCGGGGTCGACTTCATCACATCGGCGCCGAGAAAGGCGCCGCTGTAACAACAGTCGAGCAGGATGACCTTGGCCGCGGCCGCGGAATCCTTGATCAGTTCCCGGATGAAGGTGGCCGAGATGCCGGTGCTCGACAGCAGTTGCGGATCGGTATTACTGGTGGCCAGGTAGAGATTCTGCCGGGTGCGCAGGCCGTGGCCGGAGAAGTAGAGCAGCACCACGTCGTCGGGTCCGGCGCCGCGGAACAGCCGTTCGATACTGCGCTCGATTTCGGCCTTGGATTCGTTGATCAGCAGGTCGGTGGGCCGGAACCCGCCGATTTCCGGGTCGCGCAACAACTCCCGCAGTTGCTCGGCATCGGAGACCGGCGCGTAGAGCCGTGACAGCCCGTCGAAGTGATAGGTGTCGTTGGCGATGAACAGCGCGATGCGTTGTCCGCCGGGGCTAGTCATTGCCGAGCAGGTCCAGCAGCCGATCGATCTGGTCGGCCGAAGCGCCGGTGAGGGTGAGCTCGTCGTCACCCTTCTTGATGGTGATCGAGCGCGCACCGGCCCGGTCGATGAACTTGGCGACGATATCGCGCACCAGCAGGGCGGCGGTGGCGAGCGCCCCGCCGGAGACGGCGAGCTGGCCGATCTGTTCGACCACACCGGATTTCGCGCCCTCGGGAGCTGACGCGGCCACCGCGCGCACCCGCACACCGCGAATCTCCTCGAGGTCGGCCCGCAGCTCACCGGTGACCTGATCGAGCCAATCCGGCCCACGGCGCCCGCCATCGATCACGAATACGACATCACCCATGGCCGCCACCCCTCGTGGTCACACACTCCCGATGCCACCACAATAGCCCCGGCCACCGACACCCCGCCCAAAAGAAGTGGCGCGGACCGGCATTCACCGGCCCACGCCAACTTCTCGGTGCGCGAAAGTGCCTACAACATGCAGCTGACGCAACCCTCCACCTCGGTGCCTTCCAGCGCCATCTGCCGCAGGCGGATGTAGTACAGAGTCTTGATGCCCTTGCGCCAGGCGTAGATCTGGGCGCGGTTGAGATCACGCGTCGTGGCGGTGTCCTTGAAGAACAGCGTCAGCGACAGGCCCTGGTCCACGTGCTGGGTGGCCGCGGCGTAGGTGTCGATGATCTTCTCGTAGCCGATTTCGTAGGCGTCCTCGTAGTACTCGAGGTTGTCGTTGGTCATGTAGGGCGCCGGGTAATAGACGCGCCCGATCTTGCCTTCCTTGCGGATCTCGATCTTCGACGCCACCGGGTGGATCGAGCTGGTGGAGTGGTTGATGTAGGAGATCGAGCCGGTGGGCGGCACGGCCTGCAGGTTCTGGTTGTAGATGCCGTGCTCCATGACCGAGGCCTTCAGCTCACGCCAGTCGTCCTGGGTGGGGATGTGCACGCCGGCGTCGGCGAACAGCTGACGCACCCGATCGGTCTTGGGCTCCCACACCTGGTCGGTGTACTTGTCGAAGTACTCGCCGCTGGCGTACTTCGATTCCGGGAAGCCGCCGAAGTAGCTGCCGCGCTCGATGGCGATCCGGTTCGACGCCCGGATCGCGTGGTAGACCACGGTGTAGAAGTAGATGTTGGTGAAGTCGATGCCTTCTTCGGACCCGTAGTGGATGCGCTCGCGCGCCAGGAAACCGTGCAGGTTCATCTGCCCGAGACCGATCGCGTGCGACTGGTTGTTGCCCTGCTCGATGGAGGGCACCGAGTAGATGTGGGTCTGGTCCGACACCGCCGTCAACGCGCGGATCGCGGTCTCGATGGTCTTGGCGAAGTCCGGCGAGTCCATCGTCTTGGCGATATTGAGCGAGCCGAGGTTGCAGGAGATGTCCTTGCCGACCTTCGAGTAGGACAGATCGTCGTTGAACTCCGACGGGGTGGAGACCTGCAGGATCTCCGAGCACAGGTTGGAGTGGGTGATCTTGCCGGCGATCGGGTTGGCCCGGTTCACCGTGTCCTCGAACATGATGTACGGGTAGCCGGATTCGAACTGCAGCTCGGCGATGGTCTGGAAGAACTCGCGCGCCTTGATCTTCGACTTGCGGATGCGCTTGTCGTCGACCATCTCGTAGTACTTCTCGGTGACGTCGATATCGGCGAACGGCTTGCCGTAGATGCGCTCCACGTCGTATGGCGAGAACAGGTACATGTCCTCGTTCTTCTTCGCCAGTTCGAAGGTGATGTCGGGGATCACCACACCGAGCGAGAGGGTCTTGATGCGGATCTTCTCGTCCGCGTTCTCCCGCTTGGTGTCGAGGAAGCGGTAGATGTCGGGGTGGTGCGCGTGCAGGTACACCGCGCCCGCGCCCTGCCGCGCGCCGAGCTGGTTGGCGTAGGAGAAGGAGTCCTCGAGCAGCTTCATGATCGGGATGACGCCGGAGGACTGGTTCTCGATCTTCTTGATCGGCGCGCCGTGCTCACGGATATTGCTGAGCAGCAACGCCACACCGCCGCCGCGCTTGGACAGCTGCAGGGCGGAGTTGATGGAGCGCCCGATGGACTCCATGTTGTCCTCGATGCGCAGCAGGAAGCACGAGACCGGCTCGCCGCGCTGCTTCTTGCCCGAGTTGAGGAAGGTGGGGGTGGCCGGCTGGAAGCGGCCGTCGATGATCTCCTCGACCAGTTCGCGGGCCAGCTGCTCGTCGCCGTCGGCCAGGGTCAGCGCGACCATGCATACGCGGTCCTCGAAACGCTCCAGGTAGCGCTTACCGTCGAAGGTCTTGAGCGTGTAGGAGGTGTAGTACTTGAACGCGCCGAGGAAGGTCGGGAACCGGAACTTCTTGGCGTAGGCCTGCTGGAACAGTCTCTTGATGAACTCGCGGCTGTACTTGTCCAGTACCTCGCGCTCGTAGTAGTTCTCCTCGATCAGATAGTCCAGCTTCTCGTCCAGGTTGTGGAAGAAGACGGTGTTCTGATTGACGTGCTGGAGGAAGTACTGGTGAGCCGCCTCGCGGTCCTTGTCGAACTGGATCTCGCCGTTCGGGCCGTACAGGTTCAGCATCGCGTTGAGGGCGTGGTAGTCGAGAACCTCGCCGCCCTCCGCGCCCCGGATCGGGGCCTGCTCTAGGCGGGCCGTCTTACCGGTCGGTGCTGTCGTTGTTGCTGCCAAAACAATCCCAATCCCTCTCGGACGCGCTCGACGTCCTCCGCGGTTCCCATGAGTTCGAAGCGATACAGGTACGGCACCCCGCATTTGCGCGAGATCACCTCGCCCGCATAGCAGAAGGTCTCGCCGAAGTTCGTGTTGCCGGCCGCGATGACCCCGCGCAGCAGGGCACGGTTGTGCGGATCGTTGAGGAACTTGGCGACCTGCCGCGGTACGAAGTCCTTATCGGACCGGTTCCCCCCGAGAACGTGCCGACCGCCCCCGTAGGTGGGGACGATCAGCACGTAGGGTTCGTCGACGCGCAGCGAATCGGCGGTGTGCAGTGGTATGCGAGTCGCCGGGAGACCCAGCTTCTCGACGAAACGATGTGTGTTCTCCGACGCGCTGGAGAAGTAGACCAGCGCGTTGCCCGAGGAGTCGGACGACTCGGCCATGGCCACCTCCCTCTCACATCGGAAGGACGGATGCGTCGGATCAGGCCGCGACGGCCAGCGACTTGATGCGGTCGGGCCGGAAACCGGACCAGTGCTCCTCGCCCGCGACGACCACGGGGGCCTGCAGGTAGCCCAGCGCCATGACGTAGTCACGCGCCTCGGCGTTCTCGGAGATGTCGATGACTTCGTAGTCCACCCCGGCCTTGTCGAGGGCCTTGTAGGTGGCATTGCACTGGACGCAAGCGGGCTTGGTGTACACGGTGATGGTCATTGATGATGTCCCTCTCTCCTATGCCTGATCCACAGCCGGTGATCCGTATGCAGTGCCTGTGACAGCAAGATCCTTCGTTGCTGCGCAAACTCCTGGATCTGGCCCGAAATCCCCTGCTCGGGCCGGTCCTCACTGGGTCGGGCTAGGTACTCTCGCTTGCCCCGCTCCAGTACCGAAGACACTACACCTAGTGGCCGACACTTTGGAACAACACGACATGTTGCGAGTCACAAGAATGAAATTTCGTCGCCGTAAGTCCCTGGACAGTCGATTCGCAAGCCGACACGACCGTGGCGCAGATCACAATTCGGCACTCCGGCGTTTCCCCAGCAAACACTCCCATCACGCCGGTCACAAGCGTCTCGGACGCCTCCTGCGCCTATCTCGCCCCATCGTCACCACCGGGCGAATGAGGACTCCCGGGCCGGAAAACGGCGGTGCCGCCCGCATCCGGTGAGGGATGCGGACGGCACCGTCGGCGGTCGAGCGATCAGGCCGATACGAGCTCATCTCGCGCCGCGCCGACCAGCTCGGTGATGGTGGCCGACAGTTCGGTCAGCGCCTCGGCGTCCTCGCGCGGATGCGCCGAACCGAACCGCTCGCCGATGGTGGCGAAGTGCAGATGCGCCGTCTCCACGACGCGCCCGCCCGCGATCCCGACCGACTTGACCGTGTCGCCGTGCGCCCAGCGCGCCGCGTTGGGACTGATGGAGGCGCTCACCACGGCGACCGGCTTGTCCTTGATGGCGCCGGCGCCGTAGGGCCGCGACAGCCAGTCGATCGCGTTCTTCAGCACGGCGGACAGGGTGCCGTTGTACTCCGGGGTCACCAGCAGCAGGCCGTCGGCCTCGGCCGCGGCGGCGCGCAGGGCCTGCGCGGCGGCAGGCACCGAACCCTCGACGTCGAGGTCCTCGTTGTAGAAGGGGATCTCGGCGAGGCCCTGGTGGATCGCGATCTCGACGCCGTCGGGTGCGATCTGCACCGCGGCCTCGGCGAGCTGGCGGTTGATCGAGCCGGCGCGGAGGCTGCCGACGAGGGTGAGGATGCGGGTCTGGCTCATGGCTTTCTCCTGGTCTACTGGTAGCGACTGCCGATGTAAGCTATGGGTTGATAACCGGACCACGGTCCGAATAATTCCTACCGGAGTAGGCGTGCCACCAGTGAGCTACAACACCTCTGTGCCCGAACCCCTCACACCCGGTACTCCCCTGCCCGCCGACCGCCCCGGCGTCCCGGCCCGCGCCGGCGAGGCCCGGCCGCTGCTCAGCATCGGCGCGCCGTTACCCGGCACCGCCGAACCCACCGAGCGCGCCGACGCCGCCCGCAACCGTCAGCTGCTGCTCGACGCGGCCCAGCAGCTGGTGCGTGAACACGGCGTGGACGGGCTCACCATGGACGCGGTGGCCAAGCGCGCCGGTGTCGGCAAGGGGACCGTGTTCCGCCGCTTCGGCAACCGGACCGGACTGATGCTGGCCCTGCTCGACCACTCCGAACGCAAATTCCAGGAGGCGTTCATGTTCGGGCCGCCGCCGCTGGGCCCGGGCGCTTCGGCCGTCGAGCGGCTGGTGGAGTTCGGGCGGGCGCGGCTGCTCGATATCGAGGTCGAGGGCGAACTGCACCGGGCCGCGGAGATGGGCCCGCCCGGCGCACGCTACAGCGGACTGCCCTACAACCTGCTCAAAACCCATGTCGCGATGCTGCTGCGGGAAGCCGCCACCCCCGGCGACATCCCGCTGCTGGCCGATTCGCTGCTCGCCGCGTTGAGCGCGGCGCTGGTGCTGCACCAGATCCGGGCCCAGGGCTACACCAGGGACCAAATCGGCGATCACTGGGAAGGTCTCGTTCGGCGTGTGGCAGGGCCGGTGCCGCCAGTAGAGTGAGCGGCTATGGGGAACCTGCGTGCACAGATCATCGCCGAGCTCGGCGTCCAGCCGTCCATCGAGCCGAAGACCGAGGTCCGGCGCCGGATCGAATTCCTCAAGGATTACCTGCGCGCCACACCGGCCACCGGGTACGTCCTCGGCATCAGCGGTGGCCAGGACAGCGCCCTGGCCGGGCGGCTGTGCCAGCTGGCCACCGAGGAACTGCTGGCCGAGGGCGTCGAGGCCACCTTCATCGCGGTGCGCCTGCCCTACGGCGTGCAGTCCGATGAGGCCGACGCGCGGATCGCGATGAACTTCGTCGCGCCGCAGCGCTCGGTGGTGGTCAATGTCCGCCCCGGCGCCAATGCCGTTGCCGCCGAGGTCGCCTCGGGACTGCAGGTGCCCAAGCTGCGCGATTTCGTGCGCGGCAATATCAAGGCCAGGGAGCGGATGGTGATCCAGTACGCCATCGCCGGACAGGAGAACCTACTGGTGGTCGGCACCGATCACGCGGCCGAAGCGGTCACCGGGTTCTTCACCAAGTTCGGTGACGGCGGCGTCGACCTGACCCCGCTCACCGGCCTGACCAAGCGCCAGGGCGCGGCGCTGTTGCAGGAACTCGGCGCCCCGGCCTCGATCTGGTCCAAGGTGCCGACCGCCGACCTGGAAGACGATCGCCCCGCCCTGCCCGACGAGGAAGCACTCGGCCTGCGCTACAGCGAGATCGACGACTACCTCGAGGGCAAAGAGGTCAGCGCGGAGGTGGCCGCGCGGGTGGAAGACATCTACCTGAAGACGCGGCACAAGCGCACGGTTCCGGTCACCCCGCTCGACGACTGGTGGCGCTGA

Protein sequences of DBSCAN-SWA_1

>NC_016887|4496420:4506826|4503367_4503844_-|WP_014352285.1|DBSCAN-SWA
MAESSDSSGNALVYFSSASENTHRFVEKLGLPATRIPLHTADSLRVDEPYVLIVPTYGGGRHVLGGNRSDKDFVPRQVAKFLNDPHNRALLRGVIAAGNTNFGETFCYAGEVISRKCGVPYLYRFELMGTAEDVERVREGLGLFWQQQRQHRPVRRPA
>NC_016887|4496420:4506826|4500735_4501092_-|WP_014352283.1|DBSCAN-SWA
MGDVVFVIDGGRRGPDWLDQVTGELRADLEEIRGVRVRAVAASAPEGAKSGVVEQIGQLAVSGGALATAALLVRDIVAKFIDRAGARSITIKKGDDELTLTGASADQIDRLLDLLGND
>NC_016887|4496420:4506826|4505374_4505995_+|WP_048834336.1|DBSCAN-SWA
MLSIGAPLPGTAEPTERADAARNRQLLLDAAQQLVREHGVDGLTMDAVAKRAGVGKGTVFRRFGNRTGLMLALLDHSERKFQEAFMFGPPPLGPGASAVERLVEFGRARLLDIEVEGELHRAAEMGPPGARYSGLPYNLLKTHVAMLLREAATPGDIPLLADSLLAALSAALVLHQIRAQGYTRDQIGDHWEGLVRRVAGPVPPVE
>NC_016887|4496420:4506826|4501223_4503356_-|WP_048834335.1|DBSCAN-SWA
MRGAEGGEVLDYHALNAMLNLYGPNGEIQFDKDREAAHQYFLQHVNQNTVFFHNLDEKLDYLIEENYYEREVLDKYSREFIKRLFQQAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLADGDEQLARELVEEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLSKRGGGVALLLSNIREHGAPIKKIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERIYGKPFADIDVTEKYYEMVDDKRIRKSKIKAREFFQTIAELQFESGYPYIMFEDTVNRANPIAGKITHSNLCSEILQVSTPSEFNDDLSYSKVGKDISCNLGSLNIAKTMDSPDFAKTIETAIRALTAVSDQTHIYSVPSIEQGNNQSHAIGLGQMNLHGFLARERIHYGSEEGIDFTNIYFYTVVYHAIRASNRIAIERGSYFGGFPESKYASGEYFDKYTDQVWEPKTDRVRQLFADAGVHIPTQDDWRELKASVMEHGIYNQNLQAVPPTGSISYINHSTSSIHPVASKIEIRKEGKIGRVYYPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDLNRAQIYAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML
>NC_016887|4496420:4506826|4504605_4505175_-|WP_014352287.1|DBSCAN-SWA
MSQTRILTLVGSLRAGSINRQLAEAAVQIAPDGVEIAIHQGLAEIPFYNEDLDVEGSVPAAAQALRAAAAEADGLLLVTPEYNGTLSAVLKNAIDWLSRPYGAGAIKDKPVAVVSASISPNAARWAHGDTVKSVGIAGGRVVETAHLHFATIGERFGSAHPREDAEALTELSATITELVGAARDELVSA
>NC_016887|4496420:4506826|4496420_4500743_-|WP_014352282.1|DBSCAN-SWA
MTSPGGQRIALFIANDTYHFDGLSRLYAPVSDAEQLRELLRDPEIGGFRPTDLLINESKAEIERSIERLFRGAGPDDVVLLYFSGHGLRTRQNLYLATSNTDPQLLSSTGISATFIRELIKDSAAAAKVILLDCCYSGAFLGADVMKSTPTIDDVGQELAAGEGICVLTATSAVETAEDGRGGADQSAPLSIFTAAMVKGIGTGLADNGSGRISAHDLWTYTLAEVRSRTSRQTPNHYGLLKDEVYIAKVRRRHPGAVEVGDRVQLGGLLGRLEQDATLGLRAEAWWGTGRLKVPVGQERRTDGAAGETVWLDLAGPDGNLLVVGRAGAGKSTLLRTLTGSLALTHAPDEAQIYVLESSNRLGSMGALPHIAGVAGDDEPEEVLSLLQTIVAEIRSRKKMYRANNIDSPASLRAARSVLVGGPAADIFLLLDRWGDFCEQIPDFAAILRQVASAGPEYGVHVVATVRDWSEAPDWLADLLPSHIELRLHRPHESRIHAERAARLPDGPGWALYRGRPFRIAMPDLRELPPDKMVLPDLADGAAELVSRVAAAWPARPADGETRRPSFDGNVDFADLFGIGADDRLDLEVAWQHRSKHERLRIPIGVTHLGETVELDLKQVGESGMGQYGLVVGAAGSGKSMLLKDIVLGLAVTHPPEAVNFLLVDFRGSETFDGLGPLPHVSAVVNALAAELPLVDRLMATLAGEIERRRQMLRRHNFADIAAYESARRRGRDLAPLPALVLVIDEFTELLAQKPDFGDTLVAIARRGRALGLHLLLSSARLEGYRLGPFEAYLSFRIGLRMFSAAESRMVLGVPDAYELPSTPGFAYLKADAAAPIRFKTAYLARPERRHDQEPETRGVQRTLLDSLVAQVRAAGEPARRIWLPPLAEPATVQELLSDHRWAPGGFGRLELPVGVVDDPFEQAQRALVLSLGGEGGNVAVVGGTRAGKSTALATIVLSAAATHTPEQVQFYVLDTGGTLGDLEQIPHVGAVVGRHEPDRIRRTVAEVMAVLTARRYRFAELGIGSMAEFRRRRDMASDPVRAEDFGDVFLVVDDWGYARRHDEGLEQQLIDLTADGLGYGVHVIISAVRWAHLRPPFRERFGTKLELRLDDPSESEFNKNDAARVPSIPGRGVIRAGAAIKAMMIAVPRLAAPAQLGGSGGDLLSSARMLAQRYPGRRAPEVRALPMRVARENVLAIAEAEGIEQSARQVVVGLRASDLSPLVLDFAKQPHLMVFGEAESGKTTLLGNILDGIGRSATEDEAAIVIIDPARRLLDLSAGLPQVARYAPSPQAITEAVDSVVQFIDNRSAGPEISPQQLRERSWWQGPELFVIVDDYERVCAAATGNPLAPLAEYLAHGHDIGLHVIIARAGAGATLALHDPVLGRLRDLGVDGVVLSGSPEEGTLLANIRPTPQPPGRGTYVTRSRPPELVQISYLPQL
>NC_016887|4496420:4506826|4506001_4506826_+|WP_014352289.1|DBSCAN-SWA
MGNLRAQIIAELGVQPSIEPKTEVRRRIEFLKDYLRATPATGYVLGISGGQDSALAGRLCQLATEELLAEGVEATFIAVRLPYGVQSDEADARIAMNFVAPQRSVVVNVRPGANAVAAEVASGLQVPKLRDFVRGNIKARERMVIQYAIAGQENLLVVGTDHAAEAVTGFFTKFGDGGVDLTPLTGLTKRQGAALLQELGAPASIWSKVPTADLEDDRPALPDEEALGLRYSEIDDYLEGKEVSAEVAARVEDIYLKTRHKRTVPVTPLDDWWR
>NC_016887|4496420:4506826|4503884_4504115_-|WP_014352286.1|DBSCAN-SWA
MTITVYTKPACVQCNATYKALDKAGVDYEVIDISENAEARDYVMALGYLQAPVVVAGEEHWSGFRPDRIKSLAVAA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014352282.1|4496420_4500743_-	type VII secretion protein EccCb	A0A127AW94	Bacillus_phage	2.6e-10	27.1
WP_014352283.1|4500735_4501092_-	hypothetical protein	NA	NA	NA	NA
WP_048834335.1|4501223_4503356_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	7.3e-216	53.5
WP_014352285.1|4503367_4503844_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A217ER62	Bacillus_phage	6.3e-11	31.2
WP_014352286.1|4503884_4504115_-	redoxin NrdH	V5UN81	Mycobacterium_phage	7.7e-23	68.0
WP_014352287.1|4504605_4505175_-	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	6.6e-07	35.4
WP_048834336.1|4505374_4505995_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014352289.1|4506001_4506826_+	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	2.2e-83	56.5