CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NC_017029	Rickettsia amblyommatis str. GAT-30V plasmid pMCE_2, complete sequence	0 crisprs	NA	0
NC_017028	Rickettsia amblyommatis str. GAT-30V, complete sequence	1 crisprs	cas3,DEDDh	1
NC_017021	Rickettsia amblyommatis str. GAT-30V plasmid pMCE_3, complete sequence	0 crisprs	NA	0
NC_017020	Rickettsia amblyommatis str. GAT-30V plasmid pMCE_1, complete sequence	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_017028_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017028_1

577584-577688

Orphan

Consensus_repeat	Method
CTGATTTCAAAATTCCTTTTGAAAAACTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_017028_1

>merge|NC_017028|1|577584-577688|CRISPRCasFinder
CTGATTTCAAAATTCCTTTTGAAAAACTAATTCAAAACAAGGAATTGCAGAAAAAATTATATCAAAAATTATTACCTGATTTCAAAATTCCTTTTGAAAAACTAA

>NC_017028|1|1|577584-577688|CRISPRCasFinder
CTGATTTCAAAATTCCTTTTGAAAAACTAA	TTCAAAACAAGGAATTGCAGAAAAAATTATATCAAAAATTATTAC
CTGATTTCAAAATTCCTTTTGAAAAACTAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_017028.1\|WP_014392120.1\|570730_571459_-\|NADH-quinone-oxidoreductase-subunit-C	unknown	unknown	gnl\|CDD\|235691
NC_017028.1\|WP_014392128.1\|580344_581859_+\|apolipoprotein-N-acyltransferase	unknown	unknown	gnl\|CDD\|234721
NC_017028.1\|WP_004995988.1\|571436_571961_-\|NADH-quinone-oxidoreductase-subunit-B	unknown	unknown	gnl\|CDD\|235797
NC_017028.1\|WP_014392131.1\|585069_585909_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226605
NC_017028.1\|WP_014392122.1\|572494_573730_-\|O-antigen-ligase-family-protein	unknown	unknown	gnl\|CDD\|225844
NC_017028.1\|WP_014392126.1\|578149_579316_+\|DUF5410-domain-containing-protein	unknown	unknown	gnl\|CDD\|375184
NC_017028.1\|WP_014392135.1\|588812_589112_-\|hypothetical-protein	unknown	unknown	unknown
NC_017028.1\|WP_014392138.1\|590768_592337_+\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234829
NC_017028.1\|WP_014392130.1\|584147_585065_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|225531
NC_017028.1\|WP_041860585.1\|569095_569362_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|198395
NC_017028.1\|WP_014392132.1\|585905_586628_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224026
NC_017028.1\|WP_014392116.1\|568293_568542_-\|membrane-protein-insertion-efficiency-factor-YidD	unknown	unknown	gnl\|CDD\|172864
NC_017028.1\|WP_014392123.1\|573730_574204_-\|DUF2155-domain-containing-protein	unknown	unknown	gnl\|CDD\|227106
NC_017028.1\|WP_014392136.1\|589500_589770_-\|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|293786
NC_017028.1\|WP_014392119.1\|569455_570631_-\|NADH-dehydrogenase-(quinone)-subunit-D	unknown	unknown	gnl\|CDD\|180385
NC_017028.1\|WP_014392137.1\|590072_590591_-\|disulfide-bond-formation-protein-B	unknown	unknown	gnl\|CDD\|224412
NC_017028.1\|WP_014392121.1\|571965_572337_-\|NADH-quinone-oxidoreductase-subunit-A	unknown	unknown	gnl\|CDD\|180638
NC_017028.1\|WP_014392127.1\|579483_580269_-\|enoyl-ACP-reductase-FabI	unknown	unknown	gnl\|CDD\|168626
NC_017028.1\|WP_014392124.1\|576034_576955_+\|site-specific-tyrosine-recombinase-XerD	unknown	unknown	gnl\|CDD\|234713
NC_017028.1\|WP_014392117.1\|568534_569038_-\|NADH-quinone-oxidoreductase-subunit-NuoE	unknown	unknown	gnl\|CDD\|181024

Protein	Function_ID	Function_description	E-value
NC_017028.1\|WP_014392120.1\|570730_571459_-\|NADH-quinone-oxidoreductase-subunit-C	gnl\|CDD\|235691	PRK06074, PRK06074, NADH dehydrogenase subunit C; Provisional.	6.60632e-87
NC_017028.1\|WP_014392128.1\|580344_581859_+\|apolipoprotein-N-acyltransferase	gnl\|CDD\|234721	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed.	8.4821e-171
NC_017028.1\|WP_004995988.1\|571436_571961_-\|NADH-quinone-oxidoreductase-subunit-B	gnl\|CDD\|235797	PRK06411, PRK06411, NADH-quinone oxidoreductase subunit NuoB.	2.04327e-112
NC_017028.1\|WP_014392131.1\|585069_585909_+\|ABC-transporter-permease	gnl\|CDD\|226605	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only].	2.13794e-99
NC_017028.1\|WP_014392122.1\|572494_573730_-\|O-antigen-ligase-family-protein	gnl\|CDD\|225844	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane].	8.95474e-45
NC_017028.1\|WP_014392126.1\|578149_579316_+\|DUF5410-domain-containing-protein	gnl\|CDD\|375184	pfam17422, DUF5410, Family of unknown function (DUF5410). This is a family of unknown function found in Rickettsia.	9.64632e-180
NC_017028.1\|WP_014392138.1\|590768_592337_+\|lysine--tRNA-ligase	gnl\|CDD\|234829	PRK00750, lysK, lysyl-tRNA synthetase; Reviewed.	0
NC_017028.1\|WP_014392130.1\|584147_585065_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|225531	COG2984, COG2984, ABC-type uncharacterized transport system, periplasmic component [General function prediction only].	9.68524e-99
NC_017028.1\|WP_041860585.1\|569095_569362_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|198395	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria. The family includes a group of uncharacterized bacterial proteins with a GIY-YIG domain that shows statistically significant similarity to the N-terminal catalytic domains of GIY-YIG family of intron-encoded homing endonuclease I-TevI and catalytic GIY-YIG domain of nucleotide excision repair endonuclease UvrC.	1.18728e-44
NC_017028.1\|WP_014392132.1\|585905_586628_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224026	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only].	1.45172e-116
NC_017028.1\|WP_014392116.1\|568293_568542_-\|membrane-protein-insertion-efficiency-factor-YidD	gnl\|CDD\|172864	PRK14388, PRK14388, membrane protein insertion efficiency factor YidD.	3.06224e-55
NC_017028.1\|WP_014392123.1\|573730_574204_-\|DUF2155-domain-containing-protein	gnl\|CDD\|227106	COG4765, COG4765, Uncharacterized protein conserved in bacteria [Function unknown].	1.93885e-75
NC_017028.1\|WP_014392136.1\|589500_589770_-\|ankyrin-repeat-domain-containing-protein	gnl\|CDD\|293786	sd00045, ANK, ankyrin repeats. Ankyrin repeats are one of the most abundant repeat motifs, and generally function as scaffolds for protein-protein interactions in processes including cell cycle, transcriptional regulation, signal transduction, vesicular trafficking, and inflammatory response. Although predominantly found in eukaryotic proteins, they are also found in some bacterial and viral proteins. Less is known of their physiological roles in prokaryotes. Some bacterial ANK proteins play key roles in microbial pathogenesis by mimicking or manipulating host function(s). The pathogen Providencia alcalifaciens N-formyltransferase ankyrin repeats function in small molecule binding and allosteric control. Ankyrin-repeat proteins have been associated with a number of human diseases.	7.67878e-13
NC_017028.1\|WP_014392119.1\|569455_570631_-\|NADH-dehydrogenase-(quinone)-subunit-D	gnl\|CDD\|180385	PRK06075, PRK06075, NADH-quinone oxidoreductase subunit D.	0
NC_017028.1\|WP_014392137.1\|590072_590591_-\|disulfide-bond-formation-protein-B	gnl\|CDD\|224412	COG1495, DsbB, Disulfide bond formation protein DsbB [Posttranslational modification, protein turnover, chaperones].	6.116e-36
NC_017028.1\|WP_014392121.1\|571965_572337_-\|NADH-quinone-oxidoreductase-subunit-A	gnl\|CDD\|180638	PRK06602, PRK06602, NADH:ubiquinone oxidoreductase subunit A; Validated.	6.37301e-54
NC_017028.1\|WP_014392127.1\|579483_580269_-\|enoyl-ACP-reductase-FabI	gnl\|CDD\|168626	PRK06603, PRK06603, enoyl-[acyl-carrier-protein] reductase FabI.	0
NC_017028.1\|WP_014392124.1\|576034_576955_+\|site-specific-tyrosine-recombinase-XerD	gnl\|CDD\|234713	PRK00283, xerD, tyrosine recombinase.	6.19253e-151
NC_017028.1\|WP_014392117.1\|568534_569038_-\|NADH-quinone-oxidoreductase-subunit-NuoE	gnl\|CDD\|181024	PRK07539, PRK07539, NADH-quinone oxidoreductase subunit NuoE.	2.43907e-92

>NC_017028.1|WP_014392124.1|576034_576955_+|site-specific-tyrosine-recombinase-XerD
MEFISQFLEMLLAERALSKNSILSYKRDLFDFQNYLAKQKLSELNITTENIRDWIEYLASNDLQARSINRKISTIKSYYEFLISENHTAFNPVLKVDLPKYQNKLPEILSIGQIKSLLEHCSQDNSPEGIRLNAMIHLLYASGLRVSELVSLRLADILTNKTSKGEVRKIFSVLGKGNKERVIVINEQAVISIAKYLAIRDVFVNKAKPRNLIYLFPSSALAGYMTRQNFAILLKSAALYAGLNPEHISPHILRHSFASHLLEGGADLRVIQELLGHADISTTQIYTHLHTNHLKKALLYHPLNKN
>NC_017028.1|WP_014392123.1|573730_574204_-|DUF2155-domain-containing-protein
MKLLKIIFIITICINFPIFAENLESVTTTENIENDVFIPLDENHPILNPNDNINDSSEFKNYTNGKIIALNNITATSEEIDFKVGEEKYFGNIKIKLHKCIKNLDPYNEDNYLLMTITEYKIDEDPNLLFQGWMISSSISLSTFEHPIYEIFAKDCF
>NC_017028.1|WP_014392122.1|572494_573730_-|O-antigen-ligase-family-protein
MQYLISSLIFLIPSLGMLAGLSAAATVTIFLLISFLRGINRHCERLKGAWQSSNNVIPWLDHGIQKIKKDWIPPQARGMTMLFTAWCFISCLFAIHLINSLATFTQVFILLFLGFAVSNSAPFQNRLQLKNALIFGILTAILLFFIEYFSHGFLTRIFKASFGLYMLDRGCALLSITAWVAIIILLSNGKKRHALMLYILVLYLLSVSDSLASFLGFGIGGVIFILTRFMKPIFFKLIAISLITGSLLFPVIAKQIEPRDLSEKYLATQPSAAHRLFIWHFVANKIIEKPILGYGLASSKYIEAGDSEMIDYNGAKWHPLPLHPHNNILQITLELGIIGLILFLCLVYKYLKQISNLKNKNFKAISYACFINYYIIGMISYNIWQIWWISSGIWVLVLMKLLVKPDIVIDN
>NC_017028.1|WP_014392121.1|571965_572337_-|NADH-quinone-oxidoreductase-subunit-A
MLQNSALLQAYLPIAIFFGIAILVSGLIMILPNLLSTKKYNKDKLEPYECGFKPFSDARSKFDIRFYLVAILFIIFDLEIAFLVPWAISLNTIGKIGFFSMMFFLFVLIIGFIYEWKKGALDW
>NC_017028.1|WP_004995988.1|571436_571961_-|NADH-quinone-oxidoreductase-subunit-B
MKNNFYQEDELLSNELSNRGFLLTKVDDVIGWARANSLWPMTFGLACCAVEMMQAAASRYDMDRFGMLFRPSPRQSDLMIVAGTLTNKMAPALRKVYDQMAEPKWVLSMGSCANGGGYYHFSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGLMQLQKKIKRTTGFKYDARQTH
>NC_017028.1|WP_014392120.1|570730_571459_-|NADH-quinone-oxidoreductase-subunit-C
MTLDKLIERLAAKSSILITPITVKDYLAYKIEPHFLLPFLKALKESEELRFTLLTDLFGADFPQNNVVNSVGLGYKEQGAKPITNRRATSNNVGESKSIDYKRFEVVYNLLSLKLNKRLIIKVYISEKETIPSAMNIFSAACWYEREVYDMYGVNFEGNDDKRRILTDYEFEGHPLRKDFPLTGYTQVKYDEKLKKVAHESVDLDIEYREFDFSSHWHSPSYVLPGDEKATDVIPAKAGIQK
>NC_017028.1|WP_014392119.1|569455_570631_-|NADH-dehydrogenase-(quinone)-subunit-D
MTNNTNTITLNLGPQHPATHGVLRLILEMDGEVVNNAAPHIGLLHRGTEKLIEHKTYLQAIPYFDRLDYVSPMCQEHAFALAVESLLECEVPRRAQFIRVLFSELTRILNHTLNIGSQALDIGATTPLLWLFEEREKIMEFYEHVSGSRMHSNYFRPGGVAADLPEGLLEDIDKFIEQFPPKLHDIESLLNENRLWKQRLVDIGVASQKEAMDWGFSGPMLRGSGIAWDLRKSNPYDVYDEMDFKVPIGKNGDCYDRYFVRMLEMYESVKIIKQCIEKMPKGAVKTDDPKLTPPTRAKMKESMEAMIHHFKLYTEGYDVPAGETYKAVEAPKGEFGVYLYSQGGNRPYRCRIKAPGFAHLQGLDFMSKGHLMADVITIIATLDIVFGEIDR
>NC_017028.1|WP_041860585.1|569095_569362_-|GIY-YIG-nuclease-family-protein
MGYILCSNKHGTLYIGITNNIIRRAYEHKQKIIKGFTSKYNIIKLVYTEEFTDIQEALTREKNLKKWQRSWKIELIEKTNPEWKDLIE
>NC_017028.1|WP_014392117.1|568534_569038_-|NADH-quinone-oxidoreductase-subunit-NuoE
MNTKITNFTFDKKNLNLAEEIIKKYPPHGKRSAILPLLDLAQRQNGGWLPVPAIEYVANMLEMPYIRVYEVATFYTMFNLKRVGKYHIQVCTTTPCWLRGSNDIMKICEKKLGVKLKETTEDQKFTLSEIECLGACVNAPVVQINDDYYEDLTQEKMEKIIDKLHND
>NC_017028.1|WP_014392116.1|568293_568542_-|membrane-protein-insertion-efficiency-factor-YidD
MTRILLLLLRFYQYFISPLLGNNCRFHPTCSEYAKEAISMHGSIKGLWLTFKRIIKCQPFCDGGYDTVPISIKNSKPLNKKI
>NC_017028.1|WP_014392126.1|578149_579316_+|DUF5410-domain-containing-protein
MATKNKKETVNTETKNLANLVIQGIGDENFDFGVLQKMQQAFSTASKQKQREAFISLLDKKLNKEQLHKLNQAIMENANELMPDNDPNFVCRTPNNKVFQEILLLEAKRSGMKAKFNDKGELQSLDVKDITQEILDHYSMLQEKFYPKRDSKDLIDSRIAQSINFLLYAPLFRESDIYTKLGLKSAEIEREIQDPNGKYAKPLVDAKIGTNINFNTKENLENKAHEGKETKISSIIEKAITKLKKDKKVNIEDTRQGEIKRHLSKSLEGASDYILTFKKNDLVDVIYQGLDKRQTWWSKIVNYIGIKSYSISKENLEKIGTIINSEMKNSHTPLKIEAQEQLKQIAKELNRLNNPASLPLKAKKVQAKSKKPPVPPKPEHLKKRNHGL
>NC_017028.1|WP_014392127.1|579483_580269_-|enoyl-ACP-reductase-FabI
MTTGLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNVVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNALHISCYSLLALSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGVAKAALEASIKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSALSEGVTGEVHYVDCGYNIMGSNKLL
>NC_017028.1|WP_014392128.1|580344_581859_+|apolipoprotein-N-acyltransferase
MYKPKIICLLLGILSGLVFAPTFFIPALFTLSYLCYIVQKSANWQEATKFGYLFGFGHFLSGIYWISIGVSVYIADFWWAIPFALFGLPIVLACFISASCTLSFFAKNNKYYQFIFCLCWVLFEWVRSWIFTGLPWNLIGYAFSFSDILIQSLSIIGIYGLSFIVIYISTSAYPLFSKQFTQLKILLASSVLVLTVIVIYGAVRLSNNHTNFTDIKVRLVQPSIPQTEKWNEEEFWHNLMLHINLSANLEPTDLIIWSEAALVVPDDIPQVKSKLLKMLNSTNAILITGGISDNKKQGDEFELYSAMYALDKNNHKLFEYHKSHLVPFGEYMPLKKILPFKKLTYGLIDYKEGNGGLVYLEKYNLKIKPLICYESIFPDFVQTNNEIADVIINITNDAWYGKSSGPYQHFHISRSRAVENGLPMIRVANNGISAIVDPFGRTIKKLNLNEINYTQGLIPKKLISPTIFSQFGNVTILLLIVFILLINYLLALILDNQRVLALLY
>NC_017028.1|WP_014392130.1|584147_585065_+|ABC-transporter-substrate-binding-protein
MFISNIFQKFFSFLFVLFITAAVYADQKKVAVIVPLEHAAMTEIISGIKESLKDIDAEIIVKNAHADSNILLAIIKQITDQDIDVIIPIGTTVSQTVISHITNKPIVCAAAIINSKNLPLVTGVNDEIKITDTISKLPFLQNITLIYSSSEKVIPEVEILKLYAGKNNISLHTVMIQNFNDMPVAVKNAPENTQSFIILKDHLIVSGINILKQEASKRRIPIIASDEGSVISGATIAVGVQEKQVGVAAGLMAKKILQGIEPKDIPFGDMKDLTLFINLKSFVKQDILTKENLSVLPFTRKELEE
>NC_017028.1|WP_014392131.1|585069_585909_+|ABC-transporter-permease
MNILVTALEQSLIMLPLILGMYISYRILKITDLTVDGTYVLGAAVFARSLSFGLFPALIFVVIAGGIIGSIVSFMQKNNRINGLIVGILASFMLYSVNLQIMQSPNISVLGMPTLLSILDLENWLIPLVIINCLIICSVIILLKGKLGLFLRAFGFNKDLLINLGKPAELYRTIGLSISNCLAALTGTLSAQVNGFADINMGFGVALVGIGAIVIGRHILIHANNFNAFKEIFSYLIGILFYFIALGVLLRIGIDPINLKLILGIVLFISLSSVKREAL
>NC_017028.1|WP_014392132.1|585905_586628_+|ATP-binding-cassette-domain-containing-protein
MKPYLYAENIQFKVKERTEPIIVETTLNIAKEEFVVILGHNGSGKSTLAKILAGYLKPTSGKVCLDQVRIDKIPKGQKASTLVTLTQKAEERLFTELTLEENIILWESRFSSNERLTSSELLELTGSPKRFLPLLAQPLGKFSGGEKQIILLALSIAHPPKILFLDEHTAHLDPKASLEVMKKTAEIIEKHKITSVMITHNLEDAVNYGERLIVLDSGKVVLDYLKPPGFSLKELKEILN
>NC_017028.1|WP_014392135.1|588812_589112_-|hypothetical-protein
MDNNFPYFYSSITSLGIFEDPTFTKKIESIAAFFNNDTQSLEYKAFKTLLSLHPSFKITGSDIILKEVATSKETEETLNTTFDMKSTKTTLIGLKLQSK
>NC_017028.1|WP_014392136.1|589500_589770_-|ankyrin-repeat-domain-containing-protein
MDRAKLLLEHNASLNIKDNYGQTILHKLIAFNSIDKMEFLLQNATNIDLEIKNHYGFTPLYSSVFDENIKAAELLLKNGADANFNHHTN
>NC_017028.1|WP_014392137.1|590072_590591_-|disulfide-bond-formation-protein-B
MPFNTIINYIRKDSYKVLHLGLIAISIIALATAYIAEYIFHYTPCPLCVYERFPYLILIKICLTALIIRQLSKYTLIFILLTILSSCILSTYHSFVERGIVQPSALCSSMIRIPKGLSIQHIKQMFYSQPITSCTKPAIKIFGISMTEYNLLLNIGLLICLLLVWFYPKSNK
>NC_017028.1|WP_014392138.1|590768_592337_+|lysine--tRNA-ligase
MSEIWEDAIKSNAWPFVEAKKILDSLNGKIPEKGYVLFETGYGPSGLPHIGTFGENARMVMVQKAFEQLSDIPTKLICFSDDMDGLRKVPSNIPNPEMVAQYMDMPLTSIPDTFGECESYGHYMNAKLRSFLDQFGFEYEFYSSTNCYKAGMFDEMLIMVLEKYYEIMELMLPTFREERKATYSPFMPICPKTGKVLQVLIEKWDAKAGTVTYKDEAGNYIEVPVTGGHCKLQWKPDFGMRWAALKVDYEMYGKDHLANARLYSEICRILGGKPPVQLCYELFLDENGEKISKSKGNSISVDDWIKYAPVESMALFMYQNPTRAKRLFFDVIPKNVDEYITFNQKYHLEEDRAKRFANPVYHIHHGNVPKIETFGITYSLLLNLTSVCNPSDKSVLWGFISKYEPKATPNTSPYLDHLAEFAIRYYNDFIKAHKSYLSPSEKHKVILRDILDMLSDIADQTEAEAIQKAIYNIGMKAGYENLRDYFKDLYQILLGQNEGPRLGTFIKLYGVQEMKKLVEGQL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

951583 : 1024992

Tupanvirus(14.29%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014392470.1\|951583_951967_-\|transposase	transposase	NA	NA	NA	NA
WP_014392472.1\|952447_952933_-	DUF2532 domain-containing protein	NA	NA	NA	NA
WP_014392473.1\|952937_953780_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_193353178.1\|953880_954333_-	hypothetical protein	NA	NA	NA	NA
WP_045799447.1\|954655_954964_-	hypothetical protein	NA	NA	NA	NA
WP_014120844.1\|955246_955372_+	50S ribosomal protein L36	NA	NA	NA	NA
WP_081120948.1\|955368_955512_-	palindromic element RPE5 domain-containing protein	NA	NA	NA	NA
WP_014392476.1\|955583_956345_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_014392477.1\|956341_957088_+	NTP transferase domain-containing protein	A0A2K9L277	Tupanvirus	1.2e-29	36.3
WP_014392478.1\|957564_957810_-	CopG family transcriptional regulator	NA	NA	NA	NA
WP_193353179.1\|957802_958060_-	BrnT family toxin	NA	NA	NA	NA
WP_193353180.1\|960112_960421_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA
WP_014392486.1\|960549_960837_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014392491.1\|962557_962854_+	hypothetical protein	NA	NA	NA	NA
WP_014392492.1\|962866_963895_-	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_014392493.1\|964108_964354_-	hypothetical protein	NA	NA	NA	NA
WP_155845531.1\|964932_965094_-	hypothetical protein	NA	NA	NA	NA
WP_041860617.1\|966311_966587_+	hypothetical protein	NA	NA	NA	NA
WP_014392497.1\|966601_967252_+	conjugal transfer protein TraW	NA	NA	NA	NA
WP_014392498.1\|967315_967504_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_193353163.1\|968449_968899_+	type-F conjugative transfer system pilin assembly protein TrbC	NA	NA	NA	NA
WP_045799448.1\|970689_971565_+	conjugal transfer protein TraF	NA	NA	NA	NA
WP_158309376.1\|973224_973380_+	HNH endonuclease	NA	NA	NA	NA
WP_081120950.1\|974072_974249_-\|transposase	transposase	NA	NA	NA	NA
WP_158309377.1\|974481_982959_-	PD-(D/E)XK nuclease domain-containing protein	NA	NA	NA	NA
WP_014392505.1\|982984_985384_-	hypothetical protein	NA	NA	NA	NA
WP_014392506.1\|986077_986527_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_014392507.1\|986615_986792_-	short-chain dehydrogenase	NA	NA	NA	NA
WP_081120751.1\|988421_988718_+\|transposase	transposase	NA	NA	NA	NA
WP_014392509.1\|988961_989282_+	hypothetical protein	NA	NA	NA	NA
WP_014392510.1\|989253_989577_+	hypothetical protein	NA	NA	NA	NA
WP_014392514.1\|991498_992104_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_014392515.1\|992658_993264_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	4.2e-60	62.0
WP_014392516.1\|993420_995127_-	30S ribosomal protein S1	NA	NA	NA	NA
WP_014392517.1\|995263_995923_-	(d)CMP kinase	NA	NA	NA	NA
WP_014392520.1\|996973_998671_+	hypothetical protein	NA	NA	NA	NA
WP_014392521.1\|998672_999485_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1S5PRR3	Streptococcus_phage	1.1e-34	34.3
WP_014392522.1\|999870_1000830_+	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	8.2e-18	25.9
WP_014392523.1\|1000940_1001681_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	NA	NA	NA
WP_134820363.1\|1004699_1004759_+	hypothetical protein	NA	NA	NA	NA
WP_014392525.1\|1004910_1005618_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2I2L310	Orpheovirus	1.0e-09	34.1
WP_014392526.1\|1005646_1006741_-	exo-alpha-sialidase	NA	NA	NA	NA
WP_014392527.1\|1006728_1008057_-	MFS transporter	NA	NA	NA	NA
WP_041860523.1\|1008161_1008455_-	conjugal transfer protein TraD	NA	NA	NA	NA
WP_014392530.1\|1008885_1013022_+	AAA family ATPase	A0A2H4ZK82	Cryptophlebia_leucotreta_granulosis_virus	2.2e-06	23.6
WP_014392531.1\|1013066_1014062_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	2.4e-28	35.5
WP_014392532.1\|1014295_1015984_-	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_014392533.1\|1015988_1017155_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_014392534.1\|1017165_1019895_-	conjugal transfer protein TraG N-terminal domain-containing protein	NA	NA	NA	NA
WP_041860625.1\|1019967_1021299_-	conjugal transfer protein TraH	NA	NA	NA	NA
WP_008579979.1\|1021288_1022191_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_014392538.1\|1024100_1024712_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_158309378.1\|1024722_1024992_+\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage