| NC_017042.1|WP_014408180.1|200381_201587_-|pyridoxal-phosphate-dependent-aminotransferase |
gnl|CDD|235596 |
PRK05764, PRK05764, aspartate aminotransferase; Provisional.
|
0 |
| NC_017042.1|WP_014408166.1|182093_182828_-|OmpW-family-protein |
gnl|CDD|225589 |
COG3047, OmpW, Outer membrane protein W [Cell envelope biogenesis, outer membrane].
|
3.2101e-66 |
| NC_017042.1|WP_014408162.1|178079_178793_+|response-regulator-transcription-factor |
gnl|CDD|223816 |
COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].
|
5.70791e-76 |
| NC_017042.1|WP_014408175.1|195730_196660_+|elongation-factor-Ts |
gnl|CDD|236491 |
PRK09377, tsf, elongation factor Ts; Provisional.
|
1.79581e-134 |
| NC_017042.1|WP_014408167.1|182982_183867_+|DMT-family-transporter |
gnl|CDD|307170 |
pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.
|
1.69135e-13 |
| NC_017042.1|WP_014408164.1|179942_180503_-|DUF1013-domain-containing-protein |
gnl|CDD|226341 |
COG3820, COG3820, Uncharacterized protein conserved in bacteria [Function unknown].
|
1.28878e-113 |
| NC_017042.1|WP_014408178.1|198182_199577_-|3-deoxy-D-manno-octulosonic-acid-transferase |
gnl|CDD|235589 |
PRK05749, PRK05749, 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed.
|
0 |
| NC_017042.1|WP_050987087.1|197608_198079_+|hypothetical-protein |
gnl|CDD|372200 |
pfam12574, 120_Rick_ant, 120 KDa Rickettsia surface antigen. This domain family is found in bacteria, and is approximately 40 amino acids in length. This family is a Rickettsia surface antigen of 120 KDa which may be used as an antigen for immune response against the bacterial species.
|
1.57267e-08 |
| NC_017042.1|WP_014364381.1|185947_186250_+|preprotein-translocase-subunit-SecG |
gnl|CDD|224233 |
COG1314, SecG, Preprotein translocase subunit SecG [Intracellular trafficking and secretion].
|
3.08056e-18 |
| NC_017042.1|WP_014408181.1|201646_201910_-|Txe/YoeB-family-addiction-module-toxin |
gnl|CDD|284238 |
pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system. YoeB_toxin is a family of bacterial toxins that forms one component of the type II toxin-antitoxin system in E. coli whose antitoxin is represented by YefM, found in pfam02604. The plasmid encoded Axe-Txe proteins in Enterococcus faecium act as an antitoxin-toxin pair. When the plasmid is lost, the antitoxin is degraded relatively quickly by host enzymes. This allows the toxin to interact with its intracellular target, thus killing the cell or impeding cell growth. These toxins are highly potent protein synthesis inhibitors, specifically blocking the initiation of translation. In the case of YoeB, it binds to the 50 S ribosomal subunit in 70 S ribosomes and interacts with the A site leading to mRNA cleavage at this site. As a result, the 3'-end portion of the mRNA is released from ribosomes, and translation initiation is effectively inhibited.
|
1.68713e-30 |
| NC_017042.1|WP_014408165.1|180557_181955_-|NAD(P)(+)-transhydrogenase-(Re/Si-specific)-subunit-beta |
gnl|CDD|376743 |
pfam02233, PNTB, NAD(P) transhydrogenase beta subunit. This family corresponds to the beta subunit of NADP transhydrogenase in prokaryotes, and either the protein N- or C terminal in eukaryotes. The domain is often found in conjunction with pfam01262. Pyridine nucleotide transhydrogenase catalyzes the reduction of NAD+ to NADPH. A complete loss of activity occurs upon mutation of Gly314 in E. coli.
|
0 |
| NC_017042.1|WP_014408168.1|183853_185110_+|MFS-transporter |
gnl|CDD|340927 |
cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.
|
1.82485e-103 |
| NC_017042.1|WP_014408161.1|177396_177855_+|protein-export-chaperone-SecB |
gnl|CDD|213561 |
TIGR00809, Protein-export_protein_SecB, protein-export chaperone SecB. This protein acts as an export-specific cytosolic chaperone. It binds the mature region of pre-proteins destined for secretion, prevents aggregation, and delivers them to SecA. This protein is tetrameric in E. coli. The archaeal Methanococcus jannaschii homolog MJ0357 has been shown () to share many properties, including chaperone-like activity, and scores between trusted and noise. [Protein fate, Protein and peptide secretion and trafficking].
|
1.06562e-72 |
| NC_017042.1|WP_014408173.1|193043_194423_+|cysteine--tRNA-ligase |
gnl|CDD|234705 |
PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.
|
0 |
| NC_017042.1|WP_041405471.1|194666_195533_+|30S-ribosomal-protein-S2 |
gnl|CDD|235396 |
PRK05299, rpsB, 30S ribosomal protein S2; Provisional.
|
3.70453e-144 |
| NC_017042.1|WP_014408179.1|199573_200230_-|DUF374-domain-containing-protein |
gnl|CDD|225032 |
COG2121, COG2121, Uncharacterized protein conserved in bacteria [Function unknown].
|
1.51623e-103 |
| NC_017042.1|WP_014408163.1|178796_179618_+|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF |
gnl|CDD|236986 |
PRK11792, queF, 7-cyano-7-deazaguanine reductase; Provisional.
|
9.78177e-162 |
| NC_017042.1|WP_014408182.1|202295_203300_+|methyltransferase-domain-containing-protein |
gnl|CDD|276809 |
sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.
|
8.16195e-05 |
| NC_017042.1|WP_012152411.1|201902_202154_-|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin |
gnl|CDD|225072 |
COG2161, StbD, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning].
|
1.67124e-18 |
