CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_017081	Phycisphaera mikurensis NBRC 102666 plasmid pPSMK1, complete sequence	0 crisprs	NA	0	0	0	0
NC_017080	Phycisphaera mikurensis NBRC 102666, complete genome	15 crisprs	cas2,cas1,cas4,cas7,cas8c,cas5,cas3,Cas9_archaeal,WYL,DinG	1	39	0	0

1. NC_017080

CRISPR-Cas detection and classification

Crispr_ID: NC_017080_1

• CRISPR_ID: NC_017080_1
• CRISPR_location: 582244-582348
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_017080_1

Consensus_repeat	Method
GGGAGCGGAAAAGGTGACAGCCACG	CRISPRCasFinder

spacers of NC_017080_1

>1.1|582269|55|NC_017080|CRISPRCasFinder
GCCCGCCGGGGCCTGGGCTGAATGCCGTTGCGGGGGCGGAAAAGGGGGCGAATGG

CRISPR arrays and Neighbor proteins around NC_017080_1

CRISPR arrays

The CRISPR arrays of NC_017080_1

>merge|NC_017080|1|582244-582348|CRISPRCasFinder
GGGAGCGGAAAAGGTGACAGCCACGGCCCGCCGGGGCCTGGGCTGAATGCCGTTGCGGGGGCGGAAAAGGGGGCGAATGGCGGGGCGGAAAAGGTGACAGCCACG

>NC_017080|1|1|582244-582348|CRISPRCasFinder
GGGAGCGGAAAAGGTGACAGCCACG	GCCCGCCGGGGCCTGGGCTGAATGCCGTTGCGGGGGCGGAAAAGGGGGCGAATGG
CGGGGCGGAAAAGGTGACAGCCACG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_017080.1|WP_154661932.1|588848_590114_+|IS256-family-transposase	unknown	unknown	gnl|CDD|307151
NC_017080.1|WP_154661729.1|564201_565083_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_053230218.1|573787_574516_-|triose-phosphate-isomerase	unknown	unknown	gnl|CDD|234589
NC_017080.1|WP_154661731.1|587734_588079_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014435890.1|568390_570475_-|hypothetical-protein	unknown	unknown	gnl|CDD|227807
NC_017080.1|WP_014435905.1|591054_591651_-|class-IV-adenylate-cyclase	unknown	unknown	gnl|CDD|143628
NC_017080.1|WP_014435891.1|570648_571962_+|sulfatase	unknown	unknown	gnl|CDD|293751
NC_017080.1|WP_014435897.1|582501_583503_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_041377905.1|581630_582212_+|hypothetical-protein	unknown	unknown	gnl|CDD|236689
NC_017080.1|WP_014435901.1|587150_587588_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014435904.1|590346_591027_-|Fe(2+)-trafficking-protein	unknown	unknown	gnl|CDD|180059
NC_017080.1|WP_014435892.1|572178_573096_-|YicC-family-protein	unknown	unknown	gnl|CDD|236993
NC_017080.1|WP_041377906.1|585933_586533_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014435902.1|588211_588622_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014435889.1|567178_568345_+|XylR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|380485
NC_017080.1|WP_083854991.1|566261_566912_-|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|377877
NC_017080.1|WP_041377904.1|575016_581604_+|LEPR-XLL-domain-containing-protein	unknown	unknown	gnl|CDD|379155
NC_017080.1|WP_154661732.1|591657_592221_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014435887.1|565239_566130_-|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl|CDD|225076
NC_017080.1|WP_014435898.1|584121_585126_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_017080.1|WP_154661932.1|588848_590114_+|IS256-family-transposase	gnl|CDD|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	4.97003e-101
NC_017080.1|WP_053230218.1|573787_574516_-|triose-phosphate-isomerase	gnl|CDD|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	6.43579e-114
NC_017080.1|WP_014435890.1|568390_570475_-|hypothetical-protein	gnl|CDD|227807	COG5520, COG5520, O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane].	1.24471e-07
NC_017080.1|WP_014435905.1|591054_591651_-|class-IV-adenylate-cyclase	gnl|CDD|143628	cd07890, CYTH-like_AC_IV-like, Adenylyl cyclase (AC) class IV-like, a subgroup of the CYTH-like superfamily. This subgroup contains class IV ACs and similar proteins. AC catalyzes the conversion of ATP to 3',5'-cyclic AMP (cAMP) and PPi. cAMP is a key signaling molecule which conveys a variety of signals in different cell types. In prokaryotes, cAMP is a catabolite derepression signal which triggers the expression of metabolic pathways including the lactose operon. Six non-homologous classes of ACs have been identified (I-VI). Class IV ACs are found in this group. In bacteria, the gene encoding Class IV AC has been designated cyaB and the protein as AC2. AC-IV occurs in addition to AC-I in bacterial pathogens such as Yersinia pestis (plague disease). The role of AC-IV is unknown but it has been speculated that it may be a factor in pathogenesis, perhaps providing cAMP for a secondary internal signaling function, or for secretion and uptake into host cells, where it may disrupt normal cellular processes. This subgroup belongs to the CYTH/triphosphate tunnel metalloenzyme (TTM)-like superfamily, whose enzymes have a unique active site located within an eight-stranded beta barrel.	2.22433e-35
NC_017080.1|WP_014435891.1|570648_571962_+|sulfatase	gnl|CDD|293751	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase). N-sulfoglucosamine sulfohydrolase (SGSH) belongs to the sulfatase family and catalyses the cleavage of N-linked sulfate groups from the GAGs heparin sulfate and heparin. The active site is characterized by the amino-acid sequence motif C(X)PSR that is highly conserved among most sulfatases. The cysteine residue is post-translationally converted to a formylglycine (FGly) residue, which is crucial for the catalytic process. Loss of function of SGSH results a disease called mucopolysaccharidosis type IIIA (Sanfilippo A syndrome), a fatal childhood-onset neurodegenerative disease with mild facial, visceral and skeletal abnormalities.	6.21542e-131
NC_017080.1|WP_041377905.1|581630_582212_+|hypothetical-protein	gnl|CDD|236689	PRK10419, nikE, nickel ABC transporter ATP-binding protein NikE.	0.00896936
NC_017080.1|WP_014435904.1|590346_591027_-|Fe(2+)-trafficking-protein	gnl|CDD|180059	PRK05408, PRK05408, oxidative damage protection protein; Provisional.	3.72688e-10
NC_017080.1|WP_014435892.1|572178_573096_-|YicC-family-protein	gnl|CDD|236993	PRK11820, PRK11820, YicC family protein.	6.19863e-92
NC_017080.1|WP_014435889.1|567178_568345_+|XylR-family-transcriptional-regulator	gnl|CDD|380485	cd01543, PBP1_XylR, ligand-binding domain of DNA transcription repressor specific for xylose (XylR). Ligand-binding domain of DNA transcription repressor specific for xylose (XylR), a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of XylR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	1.69403e-76
NC_017080.1|WP_083854991.1|566261_566912_-|PEP-CTERM-sorting-domain-containing-protein	gnl|CDD|377877	pfam07589, VPEP, PEP-CTERM motif. This motif has been identified in a wide range of bacteria at their C-terminus. It has been suggested that this is a protein sorting signal. Based on phylogenetic profiling it has been suggested that the EpsH family of proteins mediate this function.	0.000159293
NC_017080.1|WP_041377904.1|575016_581604_+|LEPR-XLL-domain-containing-protein	gnl|CDD|379155	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.	4.43697e-14
NC_017080.1|WP_014435887.1|565239_566130_-|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl|CDD|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	7.35046e-09

Protein sequences

>NC_017080.1|WP_041377905.1|581630_582212_+|hypothetical-protein
MFWDIPIPDWKRTLVEMVRVAELGHPRAEVHACEIDGYDVWMREDEFYSEEEPLAMMPRSDVRTSDAPPLRGSRLMYIDFIGQAERRLRLAELVESLQARIPEEISGGVFPPWDPFVKIGRHTVWQRLGEQPNGTFGPLLHGRPTLSLSISGDNGPKRQDEYRKLVLSDPVLAALRGDLEVKFGPSQVVMFWD
>NC_017080.1|WP_041377904.1|575016_581604_+|LEPR-XLL-domain-containing-protein
MEPPEPSGEPRPAPRAQLGPPPAARRPADLEPLEQRILLSGTLVSSLKGHWRLDEIAGSTASSGVAAVHATLLADAAFAPAGGRLGGALSLSGSGSAAVVGNVHDPGSGSQTASIWFRRPGGGAIGNDQFLFSKGNRYSTREGWSLNLESSTQEIRFRVNGSDSSAQRASVEADLPQDDRWHHLAAVIDRDAGTLRAYLDGDGSVWRTGGGGPTTRSLASVTHIDTDDPLTLGAVHDGHLLRGNFTGLLDDARIYDRGLGELEIQALASGATRFEPEVTATGSSSTLTAGAPSTLGLHAEHARPDRWAIDWGDGTSEELAGAAASRVHTFAGSGSPQQIAVTAFYGTEAFQAPIRDGGAEADFALGGRAVLDTGSRSWIRDGAVQRDGKLVVAGGPNFTVARFLADGTPDASFGPHGTGVVEIPTAGEGQAVALQRDGKIVVAGGSWFSLARLNLDGSPDTGFGSAGTGVVDDTFGSTFEANDLLIQDDGRIVLAGDGAGDFILARFDPDGRRDHSFGGPGANGRVQTDLYGARDSANAIAAGRDGRLYVTGRTTSAGSSDYDVALAAYSADGGLDRSFGSNGRARADFGDDDEAAFGIDVQPDGRVVVAGRSRVSDANSYDFATARFTAGGFLDASFGGDGTVTTHLGRGYDAAYGVVVLNTGQLLIGGRTSGLGTTNGYDYGVVRLDADGSRDLTFGEGGVSAIDFEGERDDAEALVVGNDGRIFLIGRADGKIGVAATTGFAAPDSGGSFGAGWRLATMKPHHVYGPTGYVGGAHYEHLPIVAEDGVGVARVLAGQSFVLPGDESSALATTGSLDFTAQAGAAAASAGLILAGFAELEGFGDTPKRRLNLRWTPGGGLLLEQGGTEVFRLAGPWADGNLHRFTLAWEGDRVTFFADGAVAASGTLVAATDWASCSPMFGDEKTDQRGTAAAQVIRDVTVGEGSFSVADAAAAVAAASTPLATASREAFIGYEATDGSFSQNFLAQRIISHDAGALADPAEIGRGWIQDGSFTPDVLLPGRPIYQTLLFGDPGSFQKVSTVYTTASVSGRSDANQMVRVSNGWITGEGSMALDLTSKSREIHWGLNVWDHDRYVQHGRFSHYVADGGGAASTNGTHSDLHLGWTDGKRFITSVLQAPAPIFRGHVSMTLGGDHRLTRIVHYHDPAGFVGSAPMTPLAAGLLRDRTGDSVPLSFIDGPEAAPGQTVGYGSVRLADGSSLVGIGLGAYHHPPAQTLGASTALGSGHAQTTSVASVRPTDARPVWMGAAQGGSTEILRLTYDPDDLSSARTHLGTGWIDEAWLKTTDTLNTRHFISANPASRFYLDPDSDADGDGIRLLDERLWWNTNPDSLDTDGDGLHDDYEISYRPVLAGLGGTVNPGAPDAASAYASQSPRTQLRELQVGQGDLFNPLVKDDPKADFDRDGLPNYLESSYGSHPGLSDTDGDGVSDLKEHEQGSSPVDPSDLGLAPPLATKERVSVTVGDPSPSHSEQWALEFNRTTPGGPGSTERVRLMAPDHGLVITEDFWFDVGADYTGVIQHVGSNTDPPDYDWTADVKLATELPPEQADRPRAALTVTEVNNKDEPVLPGGSDFNIDEGKIIVRLRPSVEIDLDVDSDNTAGLYGGPDGTDEEDEHEDAYGDPEHPGKILLANTLDHDRDLIPDYADGFGLDVGMPTADRSTGARFTPLNLEVTGVLELVPEAVLRIDYAASVPLEIQATPSDLFALPQTGNLRLWNLDASTARNGESLLNGGNFVAPGVYSFAELGLRRGASSGQLWLEAVGASDVIGGDRITASVGTLQEDDVAGETFLTLFSDTVGFTAVEVQLEQRNTAGGGWVDANGFLAADLRPFPDGSVPDHFVYRFAVEDPRFEAETITLGNHDLSLSGGSVRYSEEFGVARPGQAGMADSSYLILSAGEVDFSYNPNGSYPVEWVDDVAAADREVAAEVDRAVTDMHGRWAAPAPEPGNSPNPGAFGNEVHRRVSERLQGRPGWLVDVVVDEQTNRVVKIGGGPGGSGTTQVDLIKLRSGVSPEVGDVLAKEDIKGVYDIKSSASGNVPRAQRLKLKVVSQGGAAANQGGAGEVKVTRTRYRWTAGGGWTENLKVARSLKVMSAFGLTTTASAFVHADELDAELLDVVAAFEEAKRVDLTQRPGVLAIATGKFANYLSHFDPSGNVQALSLAAFLQVLSSDAFERGDL
>NC_017080.1|WP_053230218.1|573787_574516_-|triose-phosphate-isomerase
MNLTLDAARSLAAALRDGVAGATQDRVDVTVFPAMPHLAAVADTLKGSPIAVGAQNAYFQPDGAFTGETSLSMLSDLGVASVLVGHSERRHVLGESDALVNEKVLAALEAGLDVTLAIGEKLEQRENGRTDAVNAGQLALGLAGVPAERLARVTVAYEPVWAIGTGRTASPEDAQAAHAAIRRALVSLYGADAAAGVRIQYGGSMKPGNAGDLLAGADVDGGLIGGAALQSTDFLAIVSAAA
>NC_017080.1|WP_014435892.1|572178_573096_-|YicC-family-protein
MILSMTGFGQASTEAGGVHHAVELRSLNHRFFKCHARLPDQLAGLDAELEAALRKRFARGSFALAVRITETGTHAPHRLNEPAIRGYLGQLDVLRSHLGERAEETRVDLAALLALPGVVEEAAGGRDALDLARPVLLGLLDEAADRLNAMRAEEGQTVAADLARHRELMAAEVEAAAAAAASTVHRHHDRLTARVAELLARVDLPAAGAPRLEPADLAREVALFADRCDVSEELARLRGHLDQFAEVVARDTGEPAGRTLDFLAQEMLREVNTLGAKSADAEISRRVVNLKTLIDRLKEQVQNVE
>NC_017080.1|WP_014435891.1|570648_571962_+|sulfatase
MPPLNVLYLHSHDTGRFVRPHGHAVPTPNLQAFAERGVLFRQAFSAGPTCSPSRATLFTGRPPHAVGMYGLAHEGWSLEPGCETLVTTLGRAGYRTVLGGFQHLTAWADDDWRTLGYAAASPARNGTAAERTAAACAFLRGPHDRPFFLDLGFIETHRRGDADRDGEPIQWHNGRSEPLGDPRYVRVPATLPDTPATRTDFADFLASAERLDRCCGEVLAALDAAGLREDTIVLITTDHGIAFPGMKCNLTDHGTGVLMMLAGPERLGLAGGRVIDAMVTHADVFPSLCGWLGLPEPPGLTGRSLAPLLDGRLDPAQPDALHDAVFTQVNHHLRREVERAIRTPRFKYIRRYQDDPITAHSTDASVSERVMREAGWGEQPLPAERLHDLWLDPQESCDLAAGAEHAGTVAALRGSLEAWMRRHGDPALRHAVPEPAR
>NC_017080.1|WP_014435890.1|568390_570475_-|hypothetical-protein
MVLLSRRILPLLVLAACSLAPAARPAAAASLANASLEAGTAGWGLETQAGAEATLRLDPEGGPDGKPALVIDVTKVTDKAWHVQLMNYAGSPVEDGVRYTLTFSSKADGPLNVFTTLQEDGGGYANATEPKGLDFSSRWESERVTLTGKGDHAKTRYVLGNLGKRVQTIRLSDFALVGPGEAATPAASTPPAGGAPAAAPATGDAAALEARASAAARREKLGSVVQFNPRPAQEVLGWGGHVVGNEYWDTSTPDLVDVPAALEAYYRDLGLTFVRLNVHWDAKVTGGTPSPAYAAMRDRLRAAQSHGIDDYILSCWSAPTSMKTGKGNKGYFDANENRRYDPGEPLSLLPEENEDAFIDWYVGVVRQLDDDGLGLPLNVSVQNEPDQLAAHENTLMTPEQWARLTVKMRAALDAAGLQAVGILGPDTNYTNAMATQWEVRGGTAVGFDPDETFGEGFLGGIGFTRLDENPKLDAALAGYAFHSYAQHHLPALQVGLARHPKPLWQTENSDAGGNDDFSWALFQFRHFLSDLVDVPNHYWAHWIKPRVGTEPSKWGMVMVDPDTQEVTPSKKHVAFSALWSKVRPGWRVHPMRTNDPDLRANGAGQDGWVNVDLLGFTSPDGAESVVALVNPTRGPKSLTLVGLDASEFQLRSTDADRDDALLAGGAVDRGSLRVELPPFSINLLHATGGLGDTN
>NC_017080.1|WP_014435889.1|567178_568345_+|XylR-family-transcriptional-regulator
MKQPLVAVLVGMQTSFQRGIVEGIAGHPRARGSWRVRFDPYREEANLGGLDRCDAAISGLGPEAAERLLDWGRPVVNCVNESLDRRFAANVSCNDEAVGRLVAEDLVSRGYTRFAAVGMTMAHSSSRLAGYLDALLALGHEAEVLDLRWGGADRSRMLTDADLTRWLLGLPKPVALFATNDVLGNRVIELAGAADVDVPEALVVVGVDNDPALCGLSRPPLSSVELATEHIGHSAAGIIDAILHGGDGSARDITVSVPPRRLVHRQSSNALAIDDADVAAALSFIRQNATRGIGVGDVLDHVPISRRSLELRFTRLLRRTPKQEILRVRIELAKAELATTALQVGEIAHRCGFGDQTRFGIAFKRAVGTTPTAFRRKFLVGRPAGRRG
>NC_017080.1|WP_083854991.1|566261_566912_-|PEP-CTERM-sorting-domain-containing-protein
MRNLSAVLVAVTATAVLPAGLASANLITNGSFEQDAVGSTTITGFAQQSNIDAVIVTPAVSDGSQALQLSAATTSSSRGRYGSFVNDFGSGVGVDSTLLTIGQEYRITGDIQQISTEGNSYINVNQEVNGPGGRSFPAIAVVEGEAGVIKSLDETFVYNGGRLRLALQLDGFGGGTGTVTPVARFDNFTLTVVPEPASLALVGAGGLALLGRRRSA
>NC_017080.1|WP_014435887.1|565239_566130_-|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MISRPHRTPAPARRPSGFTLIELLVVISIIALLIGILLPALGAARSSARNLLCLTQLRSMAQAVHIYAEDNKAVLPYGFTSVAPGSDWRTLIGKTIEADDGTYSASTADAGSARKIFHCPESIESTVAGTDRDLPLTYSVHPRIMPQVGPTRLDPAYDTGPNPRLAEPYRLYDLREPAALALIFDGVQIFSNPQPGTWQSNATAYKLQDTAYFRDGLPQNNLLLAPSIDLGASIDGGSNEDAQNYSGGGNAGNIRWRHAGDKVANVAFGDGHASSETWNSRFDTTLRNRNIYVQGG
>NC_017080.1|WP_154661729.1|564201_565083_+|hypothetical-protein
MSPPVRRRFALAWLAWLACGGFPLAGCVQSRVVHDGWAEFARGAAAGGADVRLGRDPDAVSDRLAARRAGQRAHRLRLAVFEGPDRMADGHEAALFARSAGGFGGVSLLDADGVAVVYAGRYADSADPAARRALKRARRLQGPANSGMAGRKPFAGARLVPLAGPLRGAAAAAPADPLDLRGHPGLFTLQVGFFDDAAEPDRRTAAERWANRLRRDEKVEAFYYHGPNRSLVTVGLFARSEFVQEGQQEGYPLAARELQKRFPHNLGNGHTLVERSASGEALGEQTSKLVKTP
>NC_017080.1|WP_014435897.1|582501_583503_+|hypothetical-protein
MPRRNRCLIVDPDLPQAWHVSNRCARSLFLLEPEAQDRGDREPEDHRKELLLARLEKLAAVSSIEVLAFSVVGNHLHLVLRNVPKVGHAWSPQEVLDRWLALHPLRNRQGPREPEAGELEALVADEAWVAATRRKLMDLSQFMKELKQHVAVKVNKLESGSGAFWSGRYKSKPIDDPEGHQLVRSMVYVDLNPLAAGLCDRPEDGRHTSLEGRLGRDGPATSAGDPLERAPSAAFRRSRSASWLVPLVGEDPRSRMHEAARAASAAVPAAGRTVLAGLTLRRYLRVVDAVSRLLRAGKASLDRRLAPILERVGLGPEDLRVGFTRMATGSPHF
>NC_017080.1|WP_014435898.1|584121_585126_+|hypothetical-protein
MPRRNRCLIVDPDLPQAWHVSNRCARSLFLLEPGAQDRGDREPEDHRKELLLARLEKLAAVSSIEVLAFSVMGNHLHLVLRNVPEVGHAWSPREVLDRWLALHPLRNRQGPREPEPGELEALVADKGWVAATRRKLMDLSQFMKELKQHVAVAVNKLESGSGAFWSGRYKSKPIDDPEGHQLVRSMVYVDLNPLAAGLCDRPEDGRHTSLEGRLGRDQPATPQQAEPAERAPTAAFRRSRSASWLVPLAGEDPRSRMHEAARAASAAVPAAGRTVLAGLTLRRYLRVVDAVSRLLRSGKASLDRRLAPILERVGLGPEDLRVGFARMATGSPHF
>NC_017080.1|WP_041377906.1|585933_586533_+|hypothetical-protein
MLATRGDRLHNEELEWKVEECEDEGDREHWQETPVHGCYGAAIMVTEQIAEVIRGWEAPELRVQPVHYHTRDWSSNTKVPMEWREAGLEPRFSVASRLTLPLMSETCQPVHRRRGTPLPRGSDEPAAMRRPEGEEQFWCYKQSEVEQMPPFDLAMTHERLGNSSRAPLNHGLVFSRRLTELLSSEDPNITWWPVMFEDE
>NC_017080.1|WP_014435901.1|587150_587588_+|hypothetical-protein
MSRPRQIPAFVRFVNRADFEAGSNARLVPAADGSGRQTIVLGTAQATGETATHANQVNAIAQQLAESGDWAHISLDRNYRTATGRVFDPKVANPLNGNQMVSPRPDIVAVGRDGRMQVFEVQSEGQNFDQLAEYVRRQEAAAVHD
>NC_017080.1|WP_154661731.1|587734_588079_-|hypothetical-protein
MQELCDMFDERDCVFLAVDQQLEAEIRSIWPSVAELIDAIEREVEPGIRLLITGSAKLMRRADALEFMIRFRRQLTFPAPVRRHLVPRDVLSRPGNLRDRHLVHRLERHRPSED
>NC_017080.1|WP_014435902.1|588211_588622_+|hypothetical-protein
MLEGYFNNRSGGVSNHAPHQVIREVYPVNLLPNEVLTMPWGKTARTLGEALKEHPGTARFERYNDHCWRWEPHWEAIETLRVDLFRAGRLWYQKMDAWQQPDWHRPDWSAPYEYTGELPDFVKPGWSDFWAHGYTP
>NC_017080.1|WP_154661932.1|588848_590114_+|IS256-family-transposase
MATAVPGAWPPRFHLQDTHCLDRHNPALTGLTGLMDLLTQHGTDAMAQAFAATLNIAMRLEREQHLGAAEHERSADRTGYANGFSPKQLDTPAGRVTVAVPKTRPVPGRGGSFEPFFPQALQRGSRACRAVNATLAQMYVQGVSTRDVKAVMAELGLENVTSAQVSRATAELDEELRAWRERPLGTVERLILDARYEKVREGGIVRDVAVLTAVGVLPNGSRSVLGVSVALSEAEVHWRAFLDSLVARGMRGVELVTSDDHAGLAEARKAVLPAVPWQRCQFHLANNAIHHAPTAATREKIGKQLGQVWNAPARAEADRRLADLIDEHEPKSPRLAKWLGKNVPEGLTVFAFPPAQRKKLRTSNGIERPIQQELKRRTRKIRVFPNAESLLRLCSALLVEIDDDWQASTRRYLPASEEVAR
>NC_017080.1|WP_014435904.1|590346_591027_-|Fe(2+)-trafficking-protein
MSTEATADEAAEARIAQWQRMAEEAPDDMAFFSLGEAYRAVGRHAEAADAYKEALVHNPDMSRALQHLGEAQLKLGQEAEATDTLTRGYAIAAGRGDVMPMRAMGERLKRLGAPIPEVESAAEKAAALQAESGGTQVLDKRTGQPQPRLDGPPMRGPIGEYIVENFGQVTWTQWIGQGTKVINELRLDFSNPEHQDVYEQHMLEWLGVTEKEISASASADGEDRSG
>NC_017080.1|WP_014435905.1|591054_591651_-|class-IV-adenylate-cyclase
MPIETEAKLPLADPEGLRRRLAALDAPLAAAFTEDNRFFDLPGDRLRGADRALRLRTETPRAGSPHAGPPRHVLCHKGPRLPGAGGAADGLKRRPEHEIVVADADGAAAFLAALGYAPRFRFEKRRDRHRLGGCVVEIDELPGLGFFVEVEGPDPDAVEATLARLGLRDAPREPRGYLALLIEGGRCGPGDPPTFRFG
>NC_017080.1|WP_154661732.1|591657_592221_-|hypothetical-protein
MPLILAARLLQTPGGLEDVGRAATATRSVPLAPLLIAAGLVLAIVALRSLARRAGLRAPGGSASAAAPDAWWSVFRSICHARGVGWPGRLLLYRVARGTGLANPLPLLAASGTLYHHGRQYAAGRPVGRRRRVLRGVSRLQRELFAEGRPDPPAPDAPAPPAAPPPDRRTRARDPRPSARLPEPPAR

Crispr_ID: NC_017080_2

• CRISPR_ID: NC_017080_2
• CRISPR_location: 768723-772772
• CRISPR_type: TypeI
• Repeat_type: NA
• Spacer_info: 61 spacers
• Cas_protein_info: cas2,cas1,cas4,cas7,cas8c,cas5,cas3

Consensus repeat of NC_017080_2

Consensus_repeat	Method
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CRISPRCasFinder
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CRT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	PILER-CR

spacers of NC_017080_2

>2.1|768755|35|NC_017080|CRISPRCasFinder,CRT
TGGTCCACCATGAGCGGGTTGCCATGGTGCAGGGT
>2.2|768822|34|NC_017080|CRISPRCasFinder,CRT
ACGAAGCGCTGCGAGAGCTGACGGCTGGCCAGAA
>2.3|768888|33|NC_017080|CRISPRCasFinder,CRT
TCCGTCCGGCCGCACCTCCTCCGGCATCGAAGC
>2.4|768953|33|NC_017080|CRISPRCasFinder,CRT
CCGCCGCCGCCGCAAGCGACCCGCTGCCTGCAG
>2.5|769018|33|NC_017080|CRISPRCasFinder,CRT
GGCCTTGTCGACGCCGATCGTCTTGTGCTCGCT
>2.6|769083|34|NC_017080|CRISPRCasFinder,CRT
GGCAGGGTCCGCCGCGGAAGGACCTCGACCCGGC
>2.7|769149|36|NC_017080|CRISPRCasFinder,CRT
GCTGCTGCCGCCGCCGGTGCTGGCCCCGGTGCTGGC
>2.8|769217|33|NC_017080|CRISPRCasFinder,CRT
CGGGGATCATGTCGATCAGCGGCGCGATAACCG
>2.9|769282|34|NC_017080|CRISPRCasFinder,CRT
ACGTCTACGTGGAGCGTTGCCCGCGAGGCTTTGC
>2.10|769348|33|NC_017080|CRISPRCasFinder,CRT
CGGAATCCCGCTTCTCTTTGTCGCGTTGCTTAT
>2.11|769413|34|NC_017080|CRISPRCasFinder,CRT
TTGAGCAACGGGAAGCGCTCTTGCATCCGTGAGT
>2.12|769479|34|NC_017080|CRISPRCasFinder,CRT
CGGTCGATCTTGATGCTGTGCATCGGGGGCTCCT
>2.13|769545|34|NC_017080|CRISPRCasFinder,CRT
GGAAGCCGGCGTCCGCCTCGACCTCGAAACAGTT
>2.14|769611|34|NC_017080|CRISPRCasFinder,CRT
GTTCGAGGCGGTCGAGGCGTTTCTCTCGGAGATC
>2.15|769677|35|NC_017080|CRISPRCasFinder,CRT
GGCAGCCAAGAAACCGGGTCGTAGGTGAGGGTCGC
>2.16|769744|34|NC_017080|CRISPRCasFinder,CRT
CCTCAGTACCAGGCACCATCGGCCGGCTCAGACT
>2.17|769810|34|NC_017080|CRISPRCasFinder,CRT
CTCGGATCGCGTCGAAGTCCTTGCGCGAGTCGAT
>2.18|769876|34|NC_017080|CRISPRCasFinder,CRT
CGCGGTCCACGCCGCTCGCCGCGAGCGCCTTCGT
>2.19|769942|33|NC_017080|CRISPRCasFinder,CRT
CAACTCCGGGAAGCGTCGTTTGACTACGTACCC
>2.20|770007|33|NC_017080|CRISPRCasFinder,CRT
GCGGCGGCGCCGAGTGCCGACCCGGCCGGCGTC
>2.21|770072|33|NC_017080|CRISPRCasFinder,CRT
CGGTCGATGTGAGGAGAAGAAGGGGCTGGAGCG
>2.22|770137|33|NC_017080|CRISPRCasFinder,CRT
CACCAGCGGCGGTCTAGGGACCCGAGACGCCGA
>2.23|770202|34|NC_017080|CRISPRCasFinder,CRT
GGGGGGTGCGACCGACCCGCGGTCGATGTGAGGA
>2.24|770268|34|NC_017080|CRISPRCasFinder,CRT
CCCCGTGGATCGTCCGCGTCTCGGCGTTCACCGA
>2.25|770334|33|NC_017080|CRISPRCasFinder,CRT
GAACATCGTGATCCCGTCGACCACCCGCGACGG
>2.26|770399|34|NC_017080|CRISPRCasFinder,CRT
CCTCGGGGATCGTCGCCGCCGCGTCCGTCGTGGT
>2.27|770465|36|NC_017080|CRISPRCasFinder,CRT
GCTCATCAGCTTGAGCTGCGCGAACTCCATCTCGTT
>2.28|770533|34|NC_017080|CRISPRCasFinder,CRT
GCCCCAGCGGCCGCCACCAAGTGTCGCCCCAGGC
>2.29|770599|33|NC_017080|CRISPRCasFinder,CRT
CTGCTCACCCCCGCGGCGGAACGCTCCGCGGAT
>2.30|770664|35|NC_017080|CRISPRCasFinder,CRT
GTGGGCAGGTACGTCGGCGTCTCGCCCGGGCGGGC
>2.31|770731|33|NC_017080|CRISPRCasFinder,CRT
CAGGGCGTGGGCGCCGGCCATGTCGTCGGCGAT
>2.32|770796|35|NC_017080|CRISPRCasFinder,CRT
GAGCTGCTGGGGCGGCCTCTGCGGTCGGTGGCCGA
>2.33|770863|35|NC_017080|CRISPRCasFinder,CRT
ATCAGACCGTCGGCGAGGTGCTCGCCCCCCAGCTG
>2.34|770930|33|NC_017080|CRISPRCasFinder,CRT
CCGAGGCGCCGGTCGAGTTCGGCGGTCCAGACG
>2.35|770995|35|NC_017080|CRISPRCasFinder,CRT
CCCCAGGGGCCGCGGCTGGGCGTGTTCACGCGGTG
>2.36|771062|34|NC_017080|CRISPRCasFinder,CRT
GGATGCCGGGCAGGTCGCCGCCGCCGGGCTCGGT
>2.37|771128|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR
CTGCTCACCCCCGCGGCGGAACGCCCCGCGGAT
>2.38|771193|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR
CGAACTCGAACGCCGCCGACTCGTCCGCGCTCGT
>2.39|771259|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR
CCGTGCGGGTGCGGGGGGAGGGCGTGACGTCAGA
>2.40|771325|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR
CCCCGCCCGCGGCTCCAACGGTCGCCGGCGGCTT
>2.41|771391|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR
GCGTCTGCGGGAGGTGCGGCCCGGCGGGCCGCT
>2.42|771456|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR
CACGCGTGGGAGATGCGTGAGCGCGAGGTTGACG
>2.43|771522|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR
CCCGCCCCGGACCGGCCATGAGCCCCGGGGTTGG
>2.44|771588|35|NC_017080|CRISPRCasFinder,CRT,PILER-CR
CTCCCGGACCAGCTGGAGCACGGAACCAGCATCGT
>2.45|771655|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR
GGGCCGAGCGCTGGTGGACCACGATCTACAGGGC
>2.46|771721|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR
CCGGCCCAAGGGCCAGTGAGCGGGGGACCGCTT
>2.47|771786|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR
GGCCCGGATGGGCGACTTCCTGCCCCGCCTGCG
>2.48|771851|35|NC_017080|CRISPRCasFinder,CRT,PILER-CR
GCCACGGTCCGCGGAACCGGCCGATCGGTGGACAT
>2.49|771918|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR
CCCCGCCCGCGGCTACACCGGTCGCCGGCGGCTT
>2.50|771984|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR
CAGTACCAGGCACCATCGGCCGGCTCAGAGACT
>2.51|772049|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR
GGGGGCCACGATGGCGCCGGAGCGCCGGAGAGA
>2.52|772114|32|NC_017080|CRISPRCasFinder,CRT,PILER-CR
CCGGGCGCGTAACTGGATCCGTCGCGGAAAAC
>2.53|772178|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR
AGACCAACCCGTAGTCGCTCGCGGCCTCGCTGGA
>2.54|772244|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR
GCCCATGCGTCCAGGTCGTCGTCGTCCGGGACCG
>2.55|772310|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR
GAGGGGCCATCGTCTTCCGCGCCGCCATCGTCA
>2.56|772375|35|NC_017080|CRISPRCasFinder,CRT,PILER-CR
CCTCTTGCTCTCGACAAGGCTCTCGACGCCGCCGA
>2.57|772442|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR
GTGATCGCGTGCCATTCCTCGCTCAACCTGCGG
>2.58|772507|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR
GGCTGTAGGTGCATCCCACCGCCCACGCCGACGC
>2.59|772573|36|NC_017080|CRISPRCasFinder,CRT,PILER-CR
GCGCATCTCGTACCAGTCGCCGTTCGTCACCCCGAA
>2.60|772641|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR
GGTATGCGACCTTCCGGCCGCCGCGTGCCGGACA
>2.61|772707|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR
AGACCAACCCGTAGTCGCTCGCGGCCTCGCTGGA

CRISPR arrays and Neighbor proteins around NC_017080_2

CRISPR arrays

The CRISPR arrays of NC_017080_2

>merge|NC_017080|2|768723-772772|CRISPRCasFinder,CRT,PILER-CR
CTTTTCCGCTCCGCCCGCGTGGAGCGGGCGACTGGTCCACCATGAGCGGGTTGCCATGGTGCAGGGTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACACGAAGCGCTGCGAGAGCTGACGGCTGGCCAGAAGTTTCGATCCACGCCCGCGTGGAGCGGGCGACTCCGTCCGGCCGCACCTCCTCCGGCATCGAAGCGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCCGCCGCCGCCGCAAGCGACCCGCTGCCTGCAGGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGGCCTTGTCGACGCCGATCGTCTTGTGCTCGCTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGGCAGGGTCCGCCGCGGAAGGACCTCGACCCGGCGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGCTGCTGCCGCCGCCGGTGCTGGCCCCGGTGCTGGCGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCGGGGATCATGTCGATCAGCGGCGCGATAACCGGTTTCGATCCACGCCCGCGTGGAGCGGGCGACACGTCTACGTGGAGCGTTGCCCGCGAGGCTTTGCGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCGGAATCCCGCTTCTCTTTGTCGCGTTGCTTATGTTTCGATCCACGCCCGCGTGGAGCGGGCGACTTGAGCAACGGGAAGCGCTCTTGCATCCGTGAGTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCGGTCGATCTTGATGCTGTGCATCGGGGGCTCCTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGGAAGCCGGCGTCCGCCTCGACCTCGAAACAGTTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGTTCGAGGCGGTCGAGGCGTTTCTCTCGGAGATCGTTTCGATCTACGCCCGCGTGGAGCGGGCGACGGCAGCCAAGAAACCGGGTCGTAGGTGAGGGTCGCGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCCTCAGTACCAGGCACCATCGGCCGGCTCAGACTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCTCGGATCGCGTCGAAGTCCTTGCGCGAGTCGATGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCGCGGTCCACGCCGCTCGCCGCGAGCGCCTTCGTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCAACTCCGGGAAGCGTCGTTTGACTACGTACCCGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGCGGCGGCGCCGAGTGCCGACCCGGCCGGCGTCGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCGGTCGATGTGAGGAGAAGAAGGGGCTGGAGCGGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCACCAGCGGCGGTCTAGGGACCCGAGACGCCGAGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGGGGGGTGCGACCGACCCGCGGTCGATGTGAGGAGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCCCCGTGGATCGTCCGCGTCTCGGCGTTCACCGAGTTTCGATCCACGCCCGCGTGGAGCGGGCGAAGAACATCGTGATCCCGTCGACCACCCGCGACGGGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCCTCGGGGATCGTCGCCGCCGCGTCCGTCGTGGTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGCTCATCAGCTTGAGCTGCGCGAACTCCATCTCGTTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGCCCCAGCGGCCGCCACCAAGTGTCGCCCCAGGCGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCTGCTCACCCCCGCGGCGGAACGCTCCGCGGATGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGTGGGCAGGTACGTCGGCGTCTCGCCCGGGCGGGCGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCAGGGCGTGGGCGCCGGCCATGTCGTCGGCGATGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGAGCTGCTGGGGCGGCCTCTGCGGTCGGTGGCCGAGTTTCGATCCACGCCCGCGTGGAGCGGGCGACATCAGACCGTCGGCGAGGTGCTCGCCCCCCAGCTGGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCCGAGGCGCCGGTCGAGTTCGGCGGTCCAGACGGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCCCCAGGGGCCGCGGCTGGGCGTGTTCACGCGGTGGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGGATGCCGGGCAGGTCGCCGCCGCCGGGCTCGGTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCTGCTCACCCCCGCGGCGGAACGCCCCGCGGATGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCGAACTCGAACGCCGCCGACTCGTCCGCGCTCGTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCCGTGCGGGTGCGGGGGGAGGGCGTGACGTCAGAGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCCCCGCCCGCGGCTCCAACGGTCGCCGGCGGCTTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGCGTCTGCGGGAGGTGCGGCCCGGCGGGCCGCTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCACGCGTGGGAGATGCGTGAGCGCGAGGTTGACGGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCCCGCCCCGGACCGGCCATGAGCCCCGGGGTTGGGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCTCCCGGACCAGCTGGAGCACGGAACCAGCATCGTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGGGCCGAGCGCTGGTGGACCACGATCTACAGGGCGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCCGGCCCAAGGGCCAGTGAGCGGGGGACCGCTTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGGCCCGGATGGGCGACTTCCTGCCCCGCCTGCGGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGCCACGGTCCGCGGAACCGGCCGATCGGTGGACATGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCCCCGCCCGCGGCTACACCGGTCGCCGGCGGCTTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCAGTACCAGGCACCATCGGCCGGCTCAGAGACTGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGGGGGCCACGATGGCGCCGGAGCGCCGGAGAGAGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCCGGGCGCGTAACTGGATCCGTCGCGGAAAACGTTTCGATCCACGCCCGCGTGGAGCGGGCGACAGACCAACCCGTAGTCGCTCGCGGCCTCGCTGGAGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGCCCATGCGTCCAGGTCGTCGTCGTCCGGGACCGGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGAGGGGCCATCGTCTTCCGCGCCGCCATCGTCAGTTTCGATCCACGCCCGCGTGGAGCGGGCGACCCTCTTGCTCTCGACAAGGCTCTCGACGCCGCCGAGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGTGATCGCGTGCCATTCCTCGCTCAACCTGCGGGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGGCTGTAGGTGCATCCCACCGCCCACGCCGACGCGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGCGCATCTCGTACCAGTCGCCGTTCGTCACCCCGAAGTTTCGATCCACGCCCGCGTGGAGCGGGCGACGGTATGCGACCTTCCGGCCGCCGCGTGCCGGACAGTTTCGATCCACGCCCGCGTGGAGCGGGCGACAGACCAACCCGTAGTCGCTCGCGGCCTCGCTGGAGTTTCGATCCACGCCCGCGTGGAGCGGGCGAC

>NC_017080|2|2|768723-772772|CRISPRCasFinder
CTTTTCCGCTCCGCCCGCGTGGAGCGGGCGAC	TGGTCCACCATGAGCGGGTTGCCATGGTGCAGGGT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	ACGAAGCGCTGCGAGAGCTGACGGCTGGCCAGAA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	TCCGTCCGGCCGCACCTCCTCCGGCATCGAAGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCGCCGCCGCCGCAAGCGACCCGCTGCCTGCAG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGCCTTGTCGACGCCGATCGTCTTGTGCTCGCT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGCAGGGTCCGCCGCGGAAGGACCTCGACCCGGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCTGCTGCCGCCGCCGGTGCTGGCCCCGGTGCTGGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CGGGGATCATGTCGATCAGCGGCGCGATAACCG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	ACGTCTACGTGGAGCGTTGCCCGCGAGGCTTTGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CGGAATCCCGCTTCTCTTTGTCGCGTTGCTTAT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	TTGAGCAACGGGAAGCGCTCTTGCATCCGTGAGT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CGGTCGATCTTGATGCTGTGCATCGGGGGCTCCT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGAAGCCGGCGTCCGCCTCGACCTCGAAACAGTT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GTTCGAGGCGGTCGAGGCGTTTCTCTCGGAGATC
GTTTCGATCTACGCCCGCGTGGAGCGGGCGAC	GGCAGCCAAGAAACCGGGTCGTAGGTGAGGGTCGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCTCAGTACCAGGCACCATCGGCCGGCTCAGACT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CTCGGATCGCGTCGAAGTCCTTGCGCGAGTCGAT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CGCGGTCCACGCCGCTCGCCGCGAGCGCCTTCGT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CAACTCCGGGAAGCGTCGTTTGACTACGTACCC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCGGCGGCGCCGAGTGCCGACCCGGCCGGCGTC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CGGTCGATGTGAGGAGAAGAAGGGGCTGGAGCG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CACCAGCGGCGGTCTAGGGACCCGAGACGCCGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGGGGGTGCGACCGACCCGCGGTCGATGTGAGGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCCCGTGGATCGTCCGCGTCTCGGCGTTCACCGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAA	GAACATCGTGATCCCGTCGACCACCCGCGACGG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCTCGGGGATCGTCGCCGCCGCGTCCGTCGTGGT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCTCATCAGCTTGAGCTGCGCGAACTCCATCTCGTT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCCCCAGCGGCCGCCACCAAGTGTCGCCCCAGGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CTGCTCACCCCCGCGGCGGAACGCTCCGCGGAT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GTGGGCAGGTACGTCGGCGTCTCGCCCGGGCGGGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CAGGGCGTGGGCGCCGGCCATGTCGTCGGCGAT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GAGCTGCTGGGGCGGCCTCTGCGGTCGGTGGCCGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	ATCAGACCGTCGGCGAGGTGCTCGCCCCCCAGCTG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCGAGGCGCCGGTCGAGTTCGGCGGTCCAGACG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCCCAGGGGCCGCGGCTGGGCGTGTTCACGCGGTG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGATGCCGGGCAGGTCGCCGCCGCCGGGCTCGGT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CTGCTCACCCCCGCGGCGGAACGCCCCGCGGAT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CGAACTCGAACGCCGCCGACTCGTCCGCGCTCGT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCGTGCGGGTGCGGGGGGAGGGCGTGACGTCAGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCCCGCCCGCGGCTCCAACGGTCGCCGGCGGCTT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCGTCTGCGGGAGGTGCGGCCCGGCGGGCCGCT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CACGCGTGGGAGATGCGTGAGCGCGAGGTTGACG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCCGCCCCGGACCGGCCATGAGCCCCGGGGTTGG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CTCCCGGACCAGCTGGAGCACGGAACCAGCATCGT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGGCCGAGCGCTGGTGGACCACGATCTACAGGGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCGGCCCAAGGGCCAGTGAGCGGGGGACCGCTT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGCCCGGATGGGCGACTTCCTGCCCCGCCTGCG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCCACGGTCCGCGGAACCGGCCGATCGGTGGACAT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCCCGCCCGCGGCTACACCGGTCGCCGGCGGCTT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CAGTACCAGGCACCATCGGCCGGCTCAGAGACT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGGGGCCACGATGGCGCCGGAGCGCCGGAGAGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCGGGCGCGTAACTGGATCCGTCGCGGAAAAC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	AGACCAACCCGTAGTCGCTCGCGGCCTCGCTGGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCCCATGCGTCCAGGTCGTCGTCGTCCGGGACCG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GAGGGGCCATCGTCTTCCGCGCCGCCATCGTCA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCTCTTGCTCTCGACAAGGCTCTCGACGCCGCCGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GTGATCGCGTGCCATTCCTCGCTCAACCTGCGG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGCTGTAGGTGCATCCCACCGCCCACGCCGACGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCGCATCTCGTACCAGTCGCCGTTCGTCACCCCGAA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGTATGCGACCTTCCGGCCGCCGCGTGCCGGACA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	AGACCAACCCGTAGTCGCTCGCGGCCTCGCTGGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC

>NC_017080|2|1|768723-772772|CRT
CTTTTCCGCTCCGCCCGCGTGGAGCGGGCGAC	TGGTCCACCATGAGCGGGTTGCCATGGTGCAGGGT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	ACGAAGCGCTGCGAGAGCTGACGGCTGGCCAGAA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	TCCGTCCGGCCGCACCTCCTCCGGCATCGAAGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCGCCGCCGCCGCAAGCGACCCGCTGCCTGCAG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGCCTTGTCGACGCCGATCGTCTTGTGCTCGCT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGCAGGGTCCGCCGCGGAAGGACCTCGACCCGGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCTGCTGCCGCCGCCGGTGCTGGCCCCGGTGCTGGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CGGGGATCATGTCGATCAGCGGCGCGATAACCG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	ACGTCTACGTGGAGCGTTGCCCGCGAGGCTTTGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CGGAATCCCGCTTCTCTTTGTCGCGTTGCTTAT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	TTGAGCAACGGGAAGCGCTCTTGCATCCGTGAGT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CGGTCGATCTTGATGCTGTGCATCGGGGGCTCCT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGAAGCCGGCGTCCGCCTCGACCTCGAAACAGTT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GTTCGAGGCGGTCGAGGCGTTTCTCTCGGAGATC
GTTTCGATCTACGCCCGCGTGGAGCGGGCGAC	GGCAGCCAAGAAACCGGGTCGTAGGTGAGGGTCGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCTCAGTACCAGGCACCATCGGCCGGCTCAGACT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CTCGGATCGCGTCGAAGTCCTTGCGCGAGTCGAT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CGCGGTCCACGCCGCTCGCCGCGAGCGCCTTCGT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CAACTCCGGGAAGCGTCGTTTGACTACGTACCC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCGGCGGCGCCGAGTGCCGACCCGGCCGGCGTC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CGGTCGATGTGAGGAGAAGAAGGGGCTGGAGCG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CACCAGCGGCGGTCTAGGGACCCGAGACGCCGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGGGGGTGCGACCGACCCGCGGTCGATGTGAGGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCCCGTGGATCGTCCGCGTCTCGGCGTTCACCGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAA	GAACATCGTGATCCCGTCGACCACCCGCGACGG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCTCGGGGATCGTCGCCGCCGCGTCCGTCGTGGT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCTCATCAGCTTGAGCTGCGCGAACTCCATCTCGTT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCCCCAGCGGCCGCCACCAAGTGTCGCCCCAGGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CTGCTCACCCCCGCGGCGGAACGCTCCGCGGAT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GTGGGCAGGTACGTCGGCGTCTCGCCCGGGCGGGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CAGGGCGTGGGCGCCGGCCATGTCGTCGGCGAT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GAGCTGCTGGGGCGGCCTCTGCGGTCGGTGGCCGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	ATCAGACCGTCGGCGAGGTGCTCGCCCCCCAGCTG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCGAGGCGCCGGTCGAGTTCGGCGGTCCAGACG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCCCAGGGGCCGCGGCTGGGCGTGTTCACGCGGTG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGATGCCGGGCAGGTCGCCGCCGCCGGGCTCGGT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CTGCTCACCCCCGCGGCGGAACGCCCCGCGGAT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CGAACTCGAACGCCGCCGACTCGTCCGCGCTCGT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCGTGCGGGTGCGGGGGGAGGGCGTGACGTCAGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCCCGCCCGCGGCTCCAACGGTCGCCGGCGGCTT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCGTCTGCGGGAGGTGCGGCCCGGCGGGCCGCT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CACGCGTGGGAGATGCGTGAGCGCGAGGTTGACG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCCGCCCCGGACCGGCCATGAGCCCCGGGGTTGG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CTCCCGGACCAGCTGGAGCACGGAACCAGCATCGT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGGCCGAGCGCTGGTGGACCACGATCTACAGGGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCGGCCCAAGGGCCAGTGAGCGGGGGACCGCTT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGCCCGGATGGGCGACTTCCTGCCCCGCCTGCG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCCACGGTCCGCGGAACCGGCCGATCGGTGGACAT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCCCGCCCGCGGCTACACCGGTCGCCGGCGGCTT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CAGTACCAGGCACCATCGGCCGGCTCAGAGACT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGGGGCCACGATGGCGCCGGAGCGCCGGAGAGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCGGGCGCGTAACTGGATCCGTCGCGGAAAAC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	AGACCAACCCGTAGTCGCTCGCGGCCTCGCTGGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCCCATGCGTCCAGGTCGTCGTCGTCCGGGACCG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GAGGGGCCATCGTCTTCCGCGCCGCCATCGTCA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCTCTTGCTCTCGACAAGGCTCTCGACGCCGCCGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GTGATCGCGTGCCATTCCTCGCTCAACCTGCGG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGCTGTAGGTGCATCCCACCGCCCACGCCGACGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCGCATCTCGTACCAGTCGCCGTTCGTCACCCCGAA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGTATGCGACCTTCCGGCCGCCGCGTGCCGGACA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	AGACCAACCCGTAGTCGCTCGCGGCCTCGCTGGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC

>NC_017080|2|1|771096-772772|PILER-CR
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CTGCTCACCCCCGCGGCGGAACGCCCCGCGGAT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CGAACTCGAACGCCGCCGACTCGTCCGCGCTCGT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCGTGCGGGTGCGGGGGGAGGGCGTGACGTCAGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCCCGCCCGCGGCTCCAACGGTCGCCGGCGGCTT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCGTCTGCGGGAGGTGCGGCCCGGCGGGCCGCT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CACGCGTGGGAGATGCGTGAGCGCGAGGTTGACG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCCGCCCCGGACCGGCCATGAGCCCCGGGGTTGG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CTCCCGGACCAGCTGGAGCACGGAACCAGCATCGT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGGCCGAGCGCTGGTGGACCACGATCTACAGGGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCGGCCCAAGGGCCAGTGAGCGGGGGACCGCTT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGCCCGGATGGGCGACTTCCTGCCCCGCCTGCG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCCACGGTCCGCGGAACCGGCCGATCGGTGGACAT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCCCGCCCGCGGCTACACCGGTCGCCGGCGGCTT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CAGTACCAGGCACCATCGGCCGGCTCAGAGACT
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGGGGCCACGATGGCGCCGGAGCGCCGGAGAGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCGGGCGCGTAACTGGATCCGTCGCGGAAAAC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	AGACCAACCCGTAGTCGCTCGCGGCCTCGCTGGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCCCATGCGTCCAGGTCGTCGTCGTCCGGGACCG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GAGGGGCCATCGTCTTCCGCGCCGCCATCGTCA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	CCTCTTGCTCTCGACAAGGCTCTCGACGCCGCCGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GTGATCGCGTGCCATTCCTCGCTCAACCTGCGG
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGCTGTAGGTGCATCCCACCGCCCACGCCGACGC
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GCGCATCTCGTACCAGTCGCCGTTCGTCACCCCGAA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	GGTATGCGACCTTCCGGCCGCCGCGTGCCGGACA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC	AGACCAACCCGTAGTCGCTCGCGGCCTCGCTGGA
GTTTCGATCCACGCCCGCGTGGAGCGGGCGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_017080.1|WP_014436064.1|764828_766142_-|nickel-dependent-lactate-racemase	unknown	unknown	gnl|CDD|370728
NC_017080.1|WP_014436054.1|753242_755780_-|DUF4040-domain-containing-protein	unknown	unknown	gnl|CDD|237154
NC_017080.1|WP_014436059.1|759464_760016_+|isochorismatase-family-protein	unknown	unknown	gnl|CDD|238494
NC_017080.1|WP_014436069.1|774347_775052_-|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl|CDD|273040
NC_017080.1|WP_154661744.1|782470_783355_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|225117
NC_017080.1|WP_014436074.1|781455_782370_-|phytanoyl-CoA-dioxygenase-family-protein	unknown	unknown	gnl|CDD|368580
NC_017080.1|WP_014436066.1|766499_768515_+|hypothetical-protein	unknown	unknown	gnl|CDD|376716
NC_017080.1|WP_014436071.1|776290_778192_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl|CDD|378245
NC_017080.1|WP_014436056.1|757292_757721_-|PilZ-domain-containing-protein	unknown	unknown	gnl|CDD|377796
NC_017080.1|WP_075077307.1|757845_759468_+|uroporphyrinogen-III-C-methyltransferase	unknown	unknown	gnl|CDD|381169
NC_017080.1|WP_014436060.1|760145_760322_+|histone-H1	unknown	unknown	gnl|CDD|311399
NC_017080.1|WP_014436072.1|778188_778878_-|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl|CDD|187534
NC_017080.1|WP_014436070.1|775395_776298_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl|CDD|377458
NC_017080.1|WP_154661745.1|783580_784426_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436061.1|760395_760872_+|(3R)-hydroxymyristoyl-ACP-dehydratase	unknown	unknown	gnl|CDD|238615
NC_017080.1|WP_014436063.1|763152_764349_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_017080.1|WP_014436067.1|772972_773263_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NC_017080.1|WP_014436062.1|760957_763045_-|beta-galactosidase	unknown	unknown	gnl|CDD|367090
NC_017080.1|WP_169332054.1|778989_781293_-|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl|CDD|350688
NC_017080.1|WP_014436068.1|773301_774351_-|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl|CDD|188360

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_017080.1|WP_014436069.1|774347_775052_-|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	6.8e-33	108.8	0.0
NC_017080.1|WP_014436072.1|778188_778878_-|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	3.8e-79	259.9	0.0
NC_017080.1|WP_014436070.1|775395_776298_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	9.3e-117	383.9	0.0
NC_017080.1|WP_014436067.1|772972_773263_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	1.1e-29	97.2	0.1
NC_017080.1|WP_169332054.1|778989_781293_-|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	3.3e-51	169.1	0.0
NC_017080.1|WP_014436068.1|773301_774351_-|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	3.9e-141	464.7	0.1
NC_017080.1|WP_014436071.1|776290_778192_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	8.1e-140	461.7	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_017080.1|WP_014436064.1|764828_766142_-|nickel-dependent-lactate-racemase	gnl|CDD|370728	pfam09861, DUF2088, Domain of unknown function (DUF2088). This domain, found in various hypothetical prokaryotic proteins, has no known function.	1.02624e-59
NC_017080.1|WP_014436054.1|753242_755780_-|DUF4040-domain-containing-protein	gnl|CDD|237154	PRK12644, PRK12644, putative monovalent cation/H+ antiporter subunit A; Reviewed.	2.07836e-127
NC_017080.1|WP_014436059.1|759464_760016_+|isochorismatase-family-protein	gnl|CDD|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	1.30506e-49
NC_017080.1|WP_014436069.1|774347_775052_-|CRISPR-associated-protein-Cas4	gnl|CDD|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	4.9101e-35
NC_017080.1|WP_154661744.1|782470_783355_+|helix-turn-helix-domain-containing-protein	gnl|CDD|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.62293e-24
NC_017080.1|WP_014436074.1|781455_782370_-|phytanoyl-CoA-dioxygenase-family-protein	gnl|CDD|368580	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH). This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalyzing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterized by the accumulation of phytanic acid in plasma and tissues.	3.38193e-23
NC_017080.1|WP_014436066.1|766499_768515_+|hypothetical-protein	gnl|CDD|376716	pfam02018, CBM_4_9, Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.	8.86844e-08
NC_017080.1|WP_014436071.1|776290_778192_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl|CDD|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NC_017080.1|WP_014436056.1|757292_757721_-|PilZ-domain-containing-protein	gnl|CDD|377796	pfam07238, PilZ, PilZ domain. PilZ is a c-di-GMP binding domain which is found C terminal to pfam07317. Proteins which contain PilZ are known to interact with the flagellar switch-complex proteins FliG and FliM. This interaction results in a reduction of torque generation and induces CCW motor bias. This domain forms a beta barrel structure.	0.000926054
NC_017080.1|WP_075077307.1|757845_759468_+|uroporphyrinogen-III-C-methyltransferase	gnl|CDD|381169	cd11642, SUMT, Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT). SUMT is an enzyme of the cobalamin and siroheme biosynthetic pathway. It catalyzes the first of three steps leading to the formation of siroheme from uroporphyrinogen III; it transfers two methyl groups from S-adenosyl-L-methionine to the C-2 and C-7 atoms of uroporphyrinogen III to yield precorrin-2 via the intermediate formation of precorrin-1. Precorrin-2 is also a precursor for the biosynthesis of vitamin B12, coenzyme F430, siroheme and heme d1. This family includes proteins in which the SUMT domain is fused to other functional domains, such as to a uroporphyrinogen-III synthase domain to form bifunctional uroporphyrinogen-III methylase/uroporphyrinogen-III synthase, or to a dual function dehydrogenase-chelatase domain, as in the case of the multifunctional S-adenosyl-L-methionine (SAM)-dependent bismethyltransferase/dehydrogenase/ferrochelatase CysG, which catalyzes all three steps that transform uroporphyrinogen III into siroheme.	1.47154e-104
NC_017080.1|WP_014436060.1|760145_760322_+|histone-H1	gnl|CDD|311399	pfam07432, Hc1, Histone H1-like protein Hc1. This family consists of several bacterial histone H1-like Hc1 proteins. In Chlamydia, Hc1 is expressed in the late stages of the life cycle, concomitant with the reorganisation of chlamydial reticulate bodies into elementary bodies. This suggests that Hc1 protein plays a role in the condensation of chromatin during intracellular differentiation.	0.00539349
NC_017080.1|WP_014436072.1|778188_778878_-|type-I-C-CRISPR-associated-protein-Cas5	gnl|CDD|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	2.37391e-101
NC_017080.1|WP_014436070.1|775395_776298_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl|CDD|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	5.19165e-148
NC_017080.1|WP_014436061.1|760395_760872_+|(3R)-hydroxymyristoyl-ACP-dehydratase	gnl|CDD|238615	cd01288, FabZ, FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.	2.01273e-22
NC_017080.1|WP_014436063.1|763152_764349_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.07125e-58
NC_017080.1|WP_014436067.1|772972_773263_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.81075e-32
NC_017080.1|WP_014436062.1|760957_763045_-|beta-galactosidase	gnl|CDD|367090	pfam02449, Glyco_hydro_42, Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.	2.96589e-125
NC_017080.1|WP_169332054.1|778989_781293_-|CRISPR-associated-helicase-Cas3'	gnl|CDD|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	9.19822e-57
NC_017080.1|WP_014436068.1|773301_774351_-|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl|CDD|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	7.05884e-174

Protein sequences

>NC_017080.1|WP_014436066.1|766499_768515_+|hypothetical-protein
MDVRLFARSLPPRLLRLALVLLLPAGLAAAETLTVSDVNRQKVEGWGVFAFGHTGVWGTDGGTFPFEFDNRPAVLDAVFRDMGVTHLRVQISALGHDSRKPGWLATYDHDGNAATAEVPRLKEIADLIKAARTRNPNLKWYVSVWSPPGSMKTPENLFNNIFSHVYDPARGGMVSTGIRPASNRTFAQWIVKALQYLEGQGAGKPVAVSPFNEPRHLVGYEGVGVIDAQQVKTIVNFFRSEFNAAGFSATRVIAPEGNHYDATTSLTGDWSSGYLWLFNNDSAGQPNIHTSAIVGTHSYDSWASDQTLQKMFDRYRGAQNSTRSRSQWMTEWSADANDQYSDFDPNRPLSELTGRPEMDVAITTARHLLREMMQFNFNLWTQWNVFDRQSNAWSGDEVLYGFVRQNSNDAPKKSKIYHVLSSIWSRVPAGSHVRTVRNDAGTGSFFNTEARPVGNGERGVDVGAFRRPDGRVVMVVVNDETRGRSVNLAGLNAGPADVYVTDGGRNNVKAGSITVDAVGRANHWFGARSVTVIHCLGGGGGARPNLVANAGFESGQLHPWRGYGSGTRLQDWGTHTGRRAARLGNSSTNGIWTVVNGLVPGTTYRMTAWIRGNAVMKATGWGGVEQLSNSGTRYNQKSLTFTTGPGVTSARLDFWSGGGDVRIDDVELRRE
>NC_017080.1|WP_014436064.1|764828_766142_-|nickel-dependent-lactate-racemase
MAHVSLRYGRSHASLRLPDDARVLSGPEIPALPDPAAAVRAALREPIGCASLRSRVSEAKPRTVAISISDITRPVPNELLIEAVLGELAAAEPPVPESAVVVIVATGMHRESTPEERRTMLGDTLPARLEVIDHTAHVAGSVRRVSEDPPVSVCERFLDADFRIVTGLIEPHFMAGFSGGRKGVCPGLVDLDTVQRFHGVGTMGDPNSVEGRLDGNPCHEIATEVAGIVAPEFLLNVAITHGREVAGVYAGELTEAFRAGCADVAGWTSAAVDAPFGLVVTSAGGYPLDKNFYQTVKSMCTALPALGEGSTLLVLSACDEVGEPAYEALYERFGPEWRAFLEHIETSGVTDKDQWEYQMQTRVLSRIGIGGLVLANDGLDAATQRKIATTPCPGAGDAVARAQAFVDGWVEANPGGRVAVIPEGPYTMLAVREAAGV
>NC_017080.1|WP_014436063.1|763152_764349_+|Gfo/Idh/MocA-family-oxidoreductase
MPQPLQIALLGSKFMGRTHSNAYLNVAKFFKLPLEPEMHTICARDAEDLAVFGPRWGWAGFSTDWKSVVDNPDVGLVDVATPNHVHKEQAIAALEAGKHVACEKPLAGTLDEARAMKDAAAARPDQHTFVWFNYRRCPAIAYARQLVKEGRLGRLFHVRAAYLQDWGGPDTPLLWRFQGDQAGSGAHGDLNAHSIDMARFVTGEEFTDVIGAVNETFIEEREIVDSAGGEISGRGAGGGGDKRMGKVTVDDAVLFLARLSGGAVASFEATRLSTGDKNRNRIEIHGEKGAIRFDFERMNELEWYDATLPGAEQGWSTINVTRGGDGHPYAAAWWPDAHIIGYEHGFVNQAADMIKVLGGEEPEAPIPDFADAWETQRVLEAALRCADKRAPVSIADVT
>NC_017080.1|WP_014436062.1|760957_763045_-|beta-galactosidase
MPGHRPAPSHRRPTGLSWFPYGCCYYPEHCPEWFWARDAERMAAAGFNLARMAEFAWTRMEPEPGRFDFSLFDRVIDALAERGVKSMLCTPTAAPPRWFTAAHPDSLRVDGRGRSLSHGSRQHVSAAHPAYREASRRITAAMAEHYATNPHVVGWQTDNEFHCHFHDDHSKAARLGFAAWCEKKFGGDIDALNRAWGTAFWSQEYGGFDQLLTPKPEAPTHSNPAHRLDHLAYLSDATATFQRDQAEILRAANPRWWITHNGVFADLDYRGRFAEDLDFLGFDSYPMFWNDPRRRPANDAARLDRVRGWTGNFIVPEQQSGAGGQSGSGGRGGYMLDSPAPGEMRQFALRAVARGCDGLLFFRWRTARFGAEQPWLGLLDADDRPSRRHDEAAGLGAELQRLAPAIRGSHVRVDAATAGADFTLNAGFGACSLGLDPPETVAAHANRVLFDRGIASGSVHPADDLTGVKLYLLPHVTLFDPSWVEPLEAWVRGGGHLVVGAMTGTRDRQNNLVASPPPGVLADLAGVTVRDSRRINDASVRPLVLEREGEAGVRVEQWAEVLEPGENAEVLARWAAVAGDAADDGFAGRPAVTGRGVGAGRVVYAGCWLTPTTAGALLPPLLDAAGVRPILPGLPAGVEAVQRVGPRGPVTFLLNPTERPVGLPDLGPRRDLLSGEAATWTLPPFGVVALTEPTG
>NC_017080.1|WP_014436061.1|760395_760872_+|(3R)-hydroxymyristoyl-ACP-dehydratase
MAPSAFIDFETLRDAPVTADAAAIEAVNPHRGAMRLLTAVTHRDAEDASLLGAYYDVPTDAFWVPGHIPGRPIFPGVLMLEAAAQLCSYSCITHFPDIAFMGFAGADAIKFRGQVSPGDRLYLALRQVELKKRRSICDVQGFIGGNLVFECRIKGMPL
>NC_017080.1|WP_014436060.1|760145_760322_+|histone-H1
MNETYEQLKQLVSSIEDDIQKAGQGNRAAGTRVRKAMQDVKNLAQDLRKKILEDRDSD
>NC_017080.1|WP_014436059.1|759464_760016_+|isochorismatase-family-protein
MSVARLPGGRTAVLLIDLQEKLLPVVDGGDTVLRRVERLARGAAVLDVPLLVTEQYPQGLGRTVSALRRELAEDVPRLEKTRFSAGGPKLLAQLRSWDAEAVVLAGVETHVCVLQTALDLLDAGFTVACCRDAVGSRRAGDAAAGTARMEAAGVLPATVESVLMELCGDAATPGFRRLHPVIR
>NC_017080.1|WP_075077307.1|757845_759468_+|uroporphyrinogen-III-C-methyltransferase
MPIATPTDAAETVPSIGRVCLVGAGPGDPGLLTVAGLDRLRRADVVVYDALASPRLLAEAKRGADLVDVGKRARHHKMQQDDINALLVAEARAGRSVVRLKGGDPYLFGRGAEEAAACARGGVACEVLPGVTSGLAAPATAGIPVTHRRVASTVTLVTGHEDPTKEGTSVDYRGLALLIARGGTACFYMGVGRLPLIAQQLAAEGLDTATPAAVVQWGTTPRQRRCVAPLDGLAAAAAAAGVSSPAIVVVGEAAGIQEPGLDFFTDRPLFGQRVLVTRTRQDPSRLENLLLAAGADPIEAPTLRLVAPEDPAPADAALRRLGPPPAASDPAAPPRFDALVLTSGNAVDALADRLDALGLDGRVLAGVELCVVGPATAARLHERLRLRADRLPETLTGAGVAEAFAAAGAAAGRRFLLYRADIARPELPEGLEAAGAAEVCEVVAYESRPAASLPEEAMAALRDRSVDWLTFTSAATARNLVDLLGEERALLDAPRVASIGPITSEACRGLGLRVAAEAEDPSLESLTAAMAAAGPREPNA
>NC_017080.1|WP_014436056.1|757292_757721_-|PilZ-domain-containing-protein
MQQDLPLENTQPNADAAPALRLVTDKPAEDVGPFKFERRLQARWQTAGRVTFVRYGDGEDDHMNASRSLGQIGSLELVDASEGGVGAWSPTPIPVGSRLSMFIPGQGGEPGVDRFGTVRQCRESDGGFLVGVEIVQQRMSAA
>NC_017080.1|WP_014436054.1|753242_755780_-|DUF4040-domain-containing-protein
MSVVWILLLAVLLPLGTGLASLLLPSRSVKPRVLLAMLGPLLAFVLIASNLSLPAADAAGAAAAGHATYATPPAVSAAPPPSVPWIPSLNLNLSWWPNGLGGFFGLLVSGIGVLIVLYARGYFGAADEQARLDLRRFYATLGFFTTAMLGVVLADSTLLTLVFWELTSVSSFLLIGWDRHDRNAIKLAVQAFFTTGLGGMFLLGGIAVFGATTGVWRWSELAGADVDFGSTGVVLGFVFMFVGAAAKSAQWPLHYWLPGAMAAPTPVSAFLHSATMVKAGVFLVGRLFPAFGDATDGVSISSWAGVIIPFGTVTMLLGGVMAVCKHDLKQVFAYTTISQLGLLMTMYGLGGLTYAYAGDGYEKVLPAIDFDVTQIANHAFYKAPLFICAGAIGHVASRQLPDLFGAFHKHKAICGVLLAAGWCLAALPLSISFQAKEIFLYAVVHAAKEHPLVYVVLVATLLTAMCNVAIFVRLATTLLGSERFGMKPTHGRHGHEDHGHHHAAEGGLWGAMIWLPAVPLVALQFVGGTATPLWNALFLPFETNIHYPGFHGEVPWIPHLSVELLLSAVAIAAGVALGLSPLLRGANPDAHTRIFPLASGSLEGLGGLAQRHLQTGSIRHYVSVVLTVLVAGFALAYARDRSMSEAVLAALADAGESWPVVFLGGMICLTAFLLPVARERVVRVLLLGACGFAVVAMYVLFEAPDLALTQLFFEIISVLLFVLALRLLPADAKPCGKPGPWRPVLSAAVGLTLGWLTLLAATADPPTRLGEAFVRATYKGVEDPVTGELGRGGGGWNIVNVILVDFRGFDTLGEISVLGLAALCVWAMLAKKKTGKSDAPAGGDA
>NC_017080.1|WP_014436067.1|772972_773263_-|CRISPR-associated-endonuclease-Cas2
MMVLVTYDVATSTRAGVRRLRRVAKCCLNRGQRVQYSVFECEVDPSEWVELKDRLEKIIDPKVDSLRYYFLGANWQRRVEHVGAKAAVDLNGPLIV
>NC_017080.1|WP_014436068.1|773301_774351_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKRLLNTLFVQTQGAYLRKEGDAVVVRIEKKTALRVPLHQLDGVVTFGQVSASPFLQGACARAGVRFSMLDRRGRFLAAVQGFSPGNVLLRREQYRRADSEEASLLIARPIVAAKIANTRTVLLRAARDHPSADPTPDAGRPTDPAATAQRMADDARLAMTATSLDRLRGVEGESGASYFRAFDGLIRAGGDAFRFEKRSRRPPLNRTNALLSFLYTLLAHDCRSACEAAGLDAAVGFLHRDRPGRPSLALDLMESLRPVLADRLTLSLINRGQVKAGSFEPHASGAVFLTEAGRRTALTAYQERKRDELMHPFIGEKIELGLVPHVQARLLARHLRGDHDAYPDFLWR
>NC_017080.1|WP_014436069.1|774347_775052_-|CRISPR-associated-protein-Cas4
MASTSFAEADLRPISALQHLFFCPRQCALIHNEQEWEENRLTAEGRVLHEKAHDDTAKEHRPGRDGGPGRRTTRGLPLRSFEHGLIGQADVVEFDDPAEGSGATAAPGAVRPVEYKRGKPKAHQADRVQLCAQALCLEEMLGLEIASGHLFYGKVRRREPVVFDLRLRTLTAATAARLHELLGSGRTPAAVYESAKCDRCSLIRVCMPKQGGRDGSAAARFDRELARSLKAGSA
>NC_017080.1|WP_014436070.1|775395_776298_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MPEPLAHRYDFAYFFDVTDGNPNGDPDAGNLPRVDPETGHGLVTDVCLKRKVRNYVQLVHEGEPPHEIYVREKAILNQQHERAYKALDVSVDAKKRKDKGDEKAAKDRELTAWMCKNFYDIRTFGAVMTTGVNCGQVRGPVQLGIARSLEPIVPAEHAVTRCAVTTEKESAAQDGDNRTMGRKFTVPYALYRVHGFVNAPLAQQTGFSEDDLNLFKRALDQMFEHDRSAARGTMAPRACIAFRHEHRLGNARADQLFRRVEAKRRDPNAAEPARRFADFELTVDEADLPEGVSVERWVAE
>NC_017080.1|WP_014436071.1|776290_778192_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILQALAEHYDRLVAQEERAHGSDTAPRIARYGYSQQKVSFAVVLEPDGSLVQIESRMQESGGKGKPRPAERIVPGQAKPSGSGLNPCFLWDNPAYLLGLPADPEDEKKVARAAESFAALRERHLALEEAIDDAGYAAVCRFLEAWDPARLPDTPGRENLDGPGFGVFRLSGERQDVHERPAVDAFWRATLEAPADAAAGDDAAPAGMCLVTGRTGPLARLHEPKIKGVLGGQSSGGLIVSFNDSAYLSQGHTDGRNAPTSEAAAFAYCTALNHLLGDERSRIRLGDTTCVLWSERASNPIAPLATGLVNDFLYAANKSGFIDDSPTAHETRTAVSGFLHRLRQGLPAAQSAELEEPGHRFFLLGLAPNAARISIRFFLRSTTGAFAEHLAAHVRGLEIVGRRDDDRPLSVQAMLRETVRDAKDVPPRLEGDLLRAVLTGVPYPQNLAAGVLRRMRADPVVNANRAAILRAWLNRLFPHKPEIPVALDPDRSDPPYVLGRLFALYERAQQEAQGKGLNRTIRDSFFATASSTPAAVFPRLSRLNGNHAGKLRRESPGRAVWLEKQIGEVFDRLDGFPRHLAMEDQGLFAIGYHHQTQDFFRKRVPGGLDTEAGDRDAAGTETTTAPSGAATYA
>NC_017080.1|WP_014436072.1|778188_778878_-|type-I-C-CRISPR-associated-protein-Cas5
MSIYLQVSGDLACFTRPEMKVERVSYDVITPSAARGVLEAIYWKPEIRWVIERIRVLKPIRWTTLRRNEVGAKASATNARSAMKAGRGTLGITVEDERQQRAATLLRDVAYVIQARFDILSGPRTPGKHLDQFNRRAKKGQCFQHPYLGCREFLADFEPADPAAPPACPEELQGEIDLGWTMLDFDYTRDRAARFFRAKMVDGVIDVPPMHPAAAVDTGGEGSLPEVVA
>NC_017080.1|WP_169332054.1|778989_781293_-|CRISPR-associated-helicase-Cas3'
MFYAHTHPAGREHWEPLATHLREVADAASAFGEAFGCGPLAHALGRWHDLGKATFAFQEKVLGAGVDEAAAEGEAQRPRARVDHATAGARYAADQLGPVLGPCLAAAVAGHHGHLPDWQTDAARDRDLEARLDPQRKRIEPHDPGFESPWDDAQAAAVGPIRWPGAEELGGHTTAFLTRMLFSCLVDADRLCTQRFSDPAGHARRPARPDLDAEAMSAALDASMAELLAGRTGDPSPVDAARAGVLAACRAAAKKGAGWFTLEVPTGGGKTLASLRFALDHARHTGQRRIVCALPFTSIIEQTAERYREVFRDLEARRGEPVVLEHHSSLDPGGVSFAAQLATENWAAPLVVTTNVQLFESLFASHGTPCRKLHRLANAILILDEAQAIPPGLMRPVLAALDELVRNFGCTVVLCTATQPAVARREGFAIGIPPERITRIVPEPERLFEAMRRVAVEPAGHLTDEELADRLAREPAALCIVNARRHAAAVLERLRERRPDALHLSAAMCPAHRSDRVAEVKRRLRAGEPCLVISTTVVEAGVDVDFPVVYRALAGFDSVAQAAGRANREGRLSGLGRVVVFETDHAPPPGVKSGVEIARGLLSAHPDPLQPEAIRAYFEEHLWKNPGPGVTPWDTHDVMPCFGGFLPDQRDGTDAHHHNFREAASRFRWIDSATTPVVVPYSEEGRRIVAALTEAEEPRFDLLREAQRHTVAVYHNQRDRLDENAVIRPGFTPEGEEPAFYLLRPEAYDEALGLRDDVLNAPGGLVC
>NC_017080.1|WP_014436074.1|781455_782370_-|phytanoyl-CoA-dioxygenase-family-protein
MPATAAAPLVPPAASGTDRLTDEQVAFYHEHGWLRIPGVYAAAEVAAMRTDLDWMIDDWAELSGGWTGPWRQKIMDASTEAKSKLIVMHDLQYYSQAWMRAVTRADVGERMSQLLTGPDEPGGAPVELHHSTMHVKPPETGHPFPMHQDLAFYDHADARYVDALVHLDDTRHENGEIRFVSGSHKLGPLEHVTEHRNDAGETVPCTPHLPWERFSLDDTDPVPAKAGDLVVFNILTVHGSHVNRTNDMRRLVRVGYKHPLNRQTRGQSAQRPNLMVRGRRPRREGEFLFGTECVGDGSGIQQEP
>NC_017080.1|WP_154661744.1|782470_783355_+|helix-turn-helix-domain-containing-protein
MVKKQQTEAAPRRAVRVEEPPGVAIACYTPMPADAFGTGYLAPTHALHLYEYDATLRLCGRELALRRGTLSFTPAGEESRYRVPRAGRHWCVHFAAEEGAGDDRGRLDLPLVWDAGDLAADARSRFERLVALAADRPARGAGALLERSLRVAALELVLWFARESSVAGPPDRRRVAEGVGVHPAVARLVAIVQRDLHRPLRAASLAAEVGMSQNHLARLFREVHGCTIPAWILRRRIELATLLLATTDLPVKAIGHRVGLPDPQHFNKQCRRLTGTSPSAIRRRGGAAAASDRG
>NC_017080.1|WP_154661745.1|783580_784426_+|hypothetical-protein
MTNTRFASAPHAAAAMGSVLEVVEPLTVAGHAADDLKIGRLLHVEGVRIEGEDPETAERVWINTERGRRLTFGRAELEHRARVLRVEELGVVELEPVAEPAERAGRRSRAVAQRRKLARRREAIHRLALAVEELGRGRRARAGRVGAAAAGQPTQAVPFLHPATPAHRVLGIHWQTAEADWNAALTEEVDVVHVHADPDPAAREKVLQRARDVKEAMRARGMHRVDPVVVGPLGDESDLLFTACLAAGIAVSGDDHGGYTRTVAGAVRKRGAAGAFRIDLR

Crispr_ID: NC_017080_3

• CRISPR_ID: NC_017080_3
• CRISPR_location: 1201273-1201494
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 4 spacers

Consensus repeat of NC_017080_3

Consensus_repeat	Method
CCGGGGCCTGGACACCGCGTACC	CRT

spacers of NC_017080_3

>3.1|1201296|31|NC_017080|CRT
CGCGTACCGGCGTACCGGGGCCTGCGGCGTA
>3.2|1201350|23|NC_017080|CRT
GGGCCTCGAGAACGTGGCCTGTG
>3.3|1201396|19|NC_017080|CRT
CGCGTACCCGCGTACCGTA
>3.4|1201438|34|NC_017080|CRT
GGGCCTCGAGAACGTGGCCTGTGCCGGGCCTGTG

CRISPR arrays and Neighbor proteins around NC_017080_3

CRISPR arrays

The CRISPR arrays of NC_017080_3

>merge|NC_017080|3|1201273-1201494|CRT
CCGAGGCCTGGACACCGCGTACCCGCGTACCGGCGTACCGGGGCCTGCGGCGTACCGGGGCCTGGACACCGCGTACCGGGCCTCGAGAACGTGGCCTGTGCCGGGGCCTGGACACCGCGTACCCGCGTACCCGCGTACCGTACCGGGGCCTGGACACCGCGTACCGGGCCTCGAGAACGTGGCCTGTGCCGGGCCTGTGCCGGGGCCTGGACACCGCGTGGT

>NC_017080|3|2|1201273-1201494|CRT
CCGAGGCCTGGACACCGCGTACC	CGCGTACCGGCGTACCGGGGCCTGCGGCGTA
CCGGGGCCTGGACACCGCGTACC	GGGCCTCGAGAACGTGGCCTGTG
CCGGGGCCTGGACACCGCGTACC	CGCGTACCCGCGTACCGTA
CCGGGGCCTGGACACCGCGTACC	GGGCCTCGAGAACGTGGCCTGTGCCGGGCCTGTG
CCGGGGCCTGGACACCGCGTGGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_017080.1|WP_053230073.1|1194132_1195947_+|chloride-channel-protein	unknown	unknown	gnl|CDD|238233
NC_017080.1|WP_154661768.1|1204635_1205232_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_041377964.1|1196955_1197831_-|anti-sigma-factor	unknown	unknown	gnl|CDD|378389
NC_017080.1|WP_014436400.1|1205536_1206622_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436401.1|1207063_1207591_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436405.1|1210187_1210922_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_154661767.1|1187827_1188616_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|379312
NC_017080.1|WP_014436389.1|1191590_1192613_-|flippase-like-domain-containing-protein	unknown	unknown	gnl|CDD|377103
NC_017080.1|WP_014436404.1|1209144_1210191_-|tRNA-epoxyqueuosine(34)-reductase-QueG	unknown	unknown	gnl|CDD|272993
NC_017080.1|WP_014436392.1|1196022_1196916_+|metallophosphoesterase	unknown	unknown	gnl|CDD|224327
NC_017080.1|WP_014436406.1|1210918_1212187_-|DUF4126-family-protein	unknown	unknown	gnl|CDD|379253
NC_017080.1|WP_014436390.1|1192658_1193852_+|terpene-cyclase/mutase-family-protein	unknown	unknown	gnl|CDD|238362
NC_017080.1|WP_014436388.1|1190274_1191504_-|L-2-hydroxyglutarate-oxidase	unknown	unknown	gnl|CDD|183292
NC_017080.1|WP_014436395.1|1198887_1200870_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl|CDD|234729
NC_017080.1|WP_014436396.1|1201621_1202626_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_053230074.1|1197848_1198487_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|237125
NC_017080.1|WP_014436387.1|1188687_1190208_-|MFS-transporter	unknown	unknown	gnl|CDD|340883
NC_017080.1|WP_041377965.1|1202855_1204595_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436402.1|1207587_1208565_+|hypothetical-protein	unknown	unknown	gnl|CDD|235906
NC_017080.1|WP_014436403.1|1208586_1209009_+|YjbQ-family-protein	unknown	unknown	gnl|CDD|376651

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_017080.1|WP_053230073.1|1194132_1195947_+|chloride-channel-protein	gnl|CDD|238233	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl- ions across cell membranes, thereby regulating electrical excitation in skeletal muscle and the flow of salt and water across epithelial barriers. This domain is found in the halogen ions (Cl-, Br- and I-) transport proteins of the ClC family. The ClC channels are found in all three kingdoms of life and perform a variety of functions including cellular excitability regulation, cell volume regulation, membrane potential stabilization, acidification of intracellular organelles, signal transduction, transepithelial transport in animals, and the extreme acid resistance response in eubacteria. They lack any structural or sequence similarity to other known ion channels and exhibit unique properties of ion permeation and gating. Unlike cation-selective ion channels, which form oligomers containing a single pore along the axis of symmetry, the ClC channels form two-pore homodimers with one pore per subunit without axial symmetry. Although lacking the typical voltage-sensor found in cation channels, all studied ClC channels are gated (opened and closed) by transmembrane voltage. The gating is conferred by the permeating ion itself, acting as the gating charge. In addition, eukaryotic and some prokaryotic ClC channels have two additional C-terminal CBS (cystathionine beta synthase) domains of putative regulatory function.	1.17475e-86
NC_017080.1|WP_041377964.1|1196955_1197831_-|anti-sigma-factor	gnl|CDD|378389	pfam10099, RskA, Anti-sigma-K factor rskA. This domain, formerly known as DUF2337, is the anti-sigma-K factor, RskA. In Mycobacterium tuberculosis the protein positively regulates expression of the antigenic proteins MPB70 and MPB83.	3.42849e-10
NC_017080.1|WP_014436402.1|1207587_1208565_+|hypothetical-protein	gnl|CDD|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	0.00447515
NC_017080.1|WP_154661767.1|1187827_1188616_+|methyltransferase-domain-containing-protein	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.13736e-16
NC_017080.1|WP_014436389.1|1191590_1192613_-|flippase-like-domain-containing-protein	gnl|CDD|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	4.59388e-19
NC_017080.1|WP_014436404.1|1209144_1210191_-|tRNA-epoxyqueuosine(34)-reductase-QueG	gnl|CDD|272993	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase. This model was rebuilt to exclude archaeal homologs, now that there is new information that bacterial members are epoxyqueuosine reductase, QueG, involved in queuosine biosynthesis for tRNA maturation. [Protein synthesis, tRNA and rRNA base modification].	3.98222e-88
NC_017080.1|WP_014436392.1|1196022_1196916_+|metallophosphoesterase	gnl|CDD|224327	COG1409, Icc, Predicted phosphohydrolases [General function prediction only].	2.47808e-20
NC_017080.1|WP_014436406.1|1210918_1212187_-|DUF4126-family-protein	gnl|CDD|379253	pfam13548, DUF4126, Domain of unknown function (DUF4126).	0.0019316
NC_017080.1|WP_014436390.1|1192658_1193852_+|terpene-cyclase/mutase-family-protein	gnl|CDD|238362	cd00688, ISOPREN_C2_like, This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement. Class II terpene cyclases include squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY), these integral membrane proteins catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. The protein prenyltransferases include protein farnesyltransferase (FTase) and geranylgeranyltransferase types I and II (GGTase-I and GGTase-II) which catalyze the carboxyl-terminal lipidation of Ras, Rab, and several other cellular signal transduction proteins, facilitating membrane associations and specific protein-protein interactions. Alpha (2)-M is a major carrier protein in serum and involved in the immobilization and entrapment of proteases. PZP is a pregnancy associated protein. Alpha (2)-M and PZP are known to bind to and, may modulate, the activity of placental protein-14 in T-cell growth and cytokine production thereby protecting the allogeneic fetus from attack by the maternal immune system.	1.66637e-11
NC_017080.1|WP_014436388.1|1190274_1191504_-|L-2-hydroxyglutarate-oxidase	gnl|CDD|183292	PRK11728, PRK11728, L-2-hydroxyglutarate oxidase.	0
NC_017080.1|WP_014436395.1|1198887_1200870_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl|CDD|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NC_017080.1|WP_053230074.1|1197848_1198487_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|237125	PRK12519, PRK12519, RNA polymerase sigma factor; Provisional.	1.51617e-49
NC_017080.1|WP_014436387.1|1188687_1190208_-|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.16557e-09
NC_017080.1|WP_014436403.1|1208586_1209009_+|YjbQ-family-protein	gnl|CDD|376651	pfam01894, UPF0047, Uncharacterized protein family UPF0047. This family has no known function. The alignment contains a conserved aspartate and histidine that may be functionally important.	3.16147e-56

Protein sequences

>NC_017080.1|WP_014436395.1|1198887_1200870_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVAYVGSKPCLPVLLEGLKRLEYRGYDSAGVAVLRPAHAGEAGPGVTTTAREVGRVMNLENAIAPRTAGFAGTTGIAHTRWATHGKVTRANAHPHAGVTAEGLTLSVVHNGTIENYASLRTLLQNKGVTFASETDTEVIAKLIADRYDAEPEGGDQPSPGESLSGFIPSTRLERATKAALRRVTGAYAVAVVCDANPHELVAARKGSPLIVGIADNGFVVASDGAAIVSHTTAAVTLADYQVVRLAAGPAGSTDAAGERHAAAWADPLHTTTLDDELLTAEVGELEMQLEEIELGGYPHYMIKEIMGQPESLRTCFRGRVDTRDGRVVLGGLTGLSRELVRAKRVALIGQGTAFHAGLIGEYLFEDLAKIPARAHYASELRYRNPIIEEGTVVVAVSQSGETADTLAAIAEAKDRGALALGAVNVVGSSIPRETDAGVYLRVGPEIGVASTKAFVGQVAVLTMMALYMGKRRYLSQADLDGYLAELERIPDHVAEIVQQSDHIKEAVEDVVTRDNWLFLGRGYNYPVALEGALKLKEISYIHAEGMPAAEMKHGPIALIDEGMPVVFVATGGSQYSKVISNIEEVKARGGRVLAVADEGDTQIDRYADHVFRVPPVSEPLQPLLTVVPLQLLAYHAAVLRGHDVDKPRNLAKSVTVE
>NC_017080.1|WP_053230074.1|1197848_1198487_-|sigma-70-family-RNA-polymerase-sigma-factor
MPAPAPDPDPAMPGPAPGEADSDLVLMAALVKRRPEALATLYDRHAGLVMAFCLRVLRDHAEAEQLTLDVFHELWERADRFNPQRSQPRTYLMTVCRSRAIDRLRRRRSSQEARGTGGDGFGVLDGRADPSAGEPLDGLLQDEQRARIDAALGALSEPERRAVELSFFDDLSHREIADALGLPLGTVKTRIRRGLLKLRDGVLRRERGGEQR
>NC_017080.1|WP_041377964.1|1196955_1197831_-|anti-sigma-factor
MPDATPEPTPDDAVRALMLVVVAGRAEPEEQVRAKALLDAGDPAALRAWSEAETTLAALAGSLEPVPPPPALRARLMAGIADAATATATAGGVPAAAARRRVTPAAAARGWPWGLVGGAVAAALTAAAFFAWSDAERRSRAQTIAALRAEVAAQREALFSLEADRVRLASLRTALASRAVELVVLAGTPAQPSAHARLLWDADAARFYLYARGLRPAGDAGDYQLWSVDDAGIKRSLAVFDAEADGSVALQLELPGGEGTAVLAAITDEPAGGSPQPTGSFQLLGEFPAGG
>NC_017080.1|WP_014436392.1|1196022_1196916_+|metallophosphoesterase
MRLALLGDVHFFELRMAPRRLLSKRAMGHANLVLNRRKKFAHERLPALLEHLRAQKPDRLLMSGDVTTSSLEAEFARVRTALATLDDAEHAIQTVLVPGNHDAYTFRSHRTSRMRTLLADVVPPSFPHNEPLGDRWELLALDSAVPNRIFSRGRLGAEQFAATRTVIERKRAGEGLVILCHYPCVVPRGTPSGWSHDLKEAAELRELLQASPAEIVFVHGHVHKPWFIGGPRGLRPGVRILNCGSPCMLGPRYPAGQGYWTMDLPADPTRPLNATHHVPQAGGGFASTEHAATPGRP
>NC_017080.1|WP_053230073.1|1194132_1195947_+|chloride-channel-protein
MRWWSRSSEALRRRFGGTGWRLMPMAAAVGAAMGVVAVAFDRLVGEAGRLIFSLPGGRAFAGVDLVLLVLLPAGGGLLVGLISLLAGRLTPLSRGPGIPVVVEALARRDGDIPAEAGLFRAVTASLTIGSGGSAGVEGPIILIGSALSSALARLGRVSAEQRRTLVGCGAAAATAAIFNAPIAAVIFVLEVILRDFSTRTFAPIVVASVFGTVTAQAILGRNEAVFEVVTELNIERVFTGQELAHYAVLGVLAGLVGAGVSASVRAAERVGKRAAGPPWLKPALGGALLGLLGVVWMATLGPAAGGGTEAPPFFGNGYPVIERLLRPETYAQEGGGVVLLAALLGFKLLGTCLTLGSGGAGGVIAPSLMIGATLGALFASVCTALGAFPGESPATYAFAGMAGLIAAVAGCPLAAFLLVFEITGDYQLILPAMLVAILATGVAQLFVPDSIYVAMLRERGVRTGAYADYTLLRRLHARDVPLVPAVTVRPEAPAAELLALSRRYAVTDFVVVDASDGYVGLVTAEDFRALLLAADALPLVVVGELMRTGLPPVNPDHTLDLVMEQFSRHDVAGLPVVDGGGRIRGMLTRVMLIRSYQETLAARG
>NC_017080.1|WP_014436390.1|1192658_1193852_+|terpene-cyclase/mutase-family-protein
MRKLFLLAWGAVVPAVLAAASHAAPADRGGSASAEAAVRGGLGFLVQHQDADGAWSPGPGPAVTALVLRALLQDGRTPPTDPAAAAALSYVLDAVQPDGSFRGGPDGMLANYNTAICVSALAQLPGDPRASAAVRGGVDFLRAKQWQAGMTDPAGDAVDDCHPYFGGAGYGRHGRPDVSNTQMMVQALHDAGLSPSDPAFQRAATFIARCQGSEANDFFPPGTIKPDGGIIYSTSEDRGNIGVPQSMANPGQLDPTVDEGLRRPVSGLRGYGSMTYAGFKSFLYAGLTREDPRVAAALGWIRENHTLERNPGMPDGLDQQGLYYYYLVYGQALAAFGEDLVEQAGGDPLDWRAALAAALAQRQRPDGSWSNDEDRWMEGDPNLATAFAVLALQAAAR
>NC_017080.1|WP_014436389.1|1191590_1192613_-|flippase-like-domain-containing-protein
MPPAAPPKPLARRILGHALRLGVAAAGIAYIVKTVRWTGGVAADGSPEPGFLDLLRDADPGLLLLGLALAALSIPVSSYRWWGLLRAAAVPMPFLRTLRLTYVGNFFNYCIPVGSTGGDVVKAYYAGRGHDRGTGGKTAVWLSVFVDRCSGLFGLLVLATLVGVTQLGDETIRPVVLTVGVVVLAGALAIAGYGWGPTFRGLRLARLDRLRGVGGVFRAARVYREQGMRPVVRAIALTLAVHGLLTVSAACAGLALGLGEHVSLGRLLVVLPLCIAAAAVPLTYQGLGVMEALAISTLAAGDSADNGIVGMLLFLRGYQLTSGFVGAVLLLAFPMEKPGS
>NC_017080.1|WP_014436388.1|1190274_1191504_-|L-2-hydroxyglutarate-oxidase
MNDVTLIGGGIVGLATAWNLLQDHPGLKVSVLEKESTLAKHQTGHNSGVLHSGIYYKPGSLKAINCRAGKKAMEAFCEEHGVPYKLCGKVITATDEKELPKLDAIFERGQANGIDCERISGERCRELEPHVASVGAIHVPESGIVDYAEVCLTMGRLIEERGGEVLLSSEVTGMTRGKDGVTTLRHHGDVRTETRTKLVVNCGGLHCDRVTKLSGNEPSAQIVPFRGEYFELTPEAEHLCKTLIYPVPDPAFPFLGVHFTSMIGGGVECGPNAVLALGRECYGKFEMNPRDLWESLTYPGFVKMAAKNWKMGVGEMWRSYNKAAFVKALARLMPEIRAEHLVACPSGIRAQALKRDGTLVDDFIVDEADGVVNVNNAPSPAATASLNIGKLITEKLGPRLPARPAAVAV
>NC_017080.1|WP_014436387.1|1188687_1190208_-|MFS-transporter
MRLLPAQDADRSPLQRDLRTVTLAWAFGSAWLWIISGAVMTRFVTAAGLPDWGFGFLAAIPFLGALSQLPASWWINARGGRRTLFLVLGTVGRLGFTAAAVLPWLMPASLPAWPGVVAVLLLAWSCMQATGPAWMNWMSDLIPRRIRGRYFARRASLVTPVAIAASIGSALLLDAFGGGGEPGPGADLGLTSAMVAAAGALGAIDILLFLRIADPHAGPRKQRHDRPPFRVVDLLNPLRDAHFRHFLGLNFGFTLATAFIGQYLWLYVLDAEQGLGWSNLKANLLIISVPMVTALFTRPFWGRMCDRRGKKPVVLISGGVVCFGAVGWGIMTPELFWPGYLIVILTTAAWPGMELANFNFLLEFSKDADRSRRDERGAGAQSAALLSVATAVAGGLSGLVGGVVAHHLRGWSDVRVLPAGLPLGLGGVVFTFTFFHVLFALSTLLRFGALAFALGLREPAAAGTRDVVRFMAAGLYNNVRVAATTPVRLPGLARKWAYRLPRPRVR
>NC_017080.1|WP_154661767.1|1187827_1188616_+|methyltransferase-domain-containing-protein
MPRRSAPGMLLPLLLLAACAESAPAGPAASPAAVAGGDGYATLPAASRDGIGKAYLGREISQVMGHLGAGWLERPEREREERTDLLVDALDLAPTDTVADVGAGTGYFTFRLAERVPEGRVLGVDIQPEMLAMLEAGEADRGLDNVEPVLGRVDDPRLPAGAVDLVLLVDAYHEFEFPREMMAGIAASLAPGGRVALVEYRGEDPAVPIKPLHKMTEAQAVREMRAAGLVHLRTDDRLPQQHLMFFGRPQDAAAPRTGGRGG
>NC_017080.1|WP_014436396.1|1201621_1202626_+|hypothetical-protein
MARRNRCLIVDPDLPQAWHVSNRCARSLFLLEPEAQDRGDREPEDHRKELLLARLEKLVAVSSIEVLAFSVMGNHLHLVLRNVPEVGHAWSPREVLDRWLALHPLRNRQGPREPEAGELEALVADEAWVAATRRKLMDLSQFMKELKQHVAVAVNKLESGSGAFWSGRYKSKPIDDPEGHQLVRSMVYVDLNPLAAGLCDRPEDGRHTSLEGRLGRDQPATPQQAEPAERAPTAAFRRSRSASWLVPLAGEDPRSRMHEAARAASAAVPAAGRTVLAGLTLRRYLRLVDAVSRLLRAGKASLDRRLAPILERVGLGPEDLRVGFARMATGSPHF
>NC_017080.1|WP_041377965.1|1202855_1204595_+|hypothetical-protein
MHDGYDFEASGNLRLWKAEGDSAGRSLEHYIQPAEEYSLQDLGLEEAGSTVKLYLEALGNTSSWWFGPNNDSTWQWNNPTSPQAISVHAEHEDLRTQIGDSVLVKPMLVDLRIDSDNDGTLSLRDEALEQAEPGIAPGAWWVINNDDSDSDLWVPDYADGYGLAAAKGTAVNAEADQVSNEDEFYKISTDFTRYAGNDAERLKVRFNYDANDPIAGVQFDGTQGYRIVDGGLIRIWTTDAADPGRDGRKLQDGGSVIESGYAYSVSDLPAAGLYLESVASSGSLADLDVLVEYLLDGVVFASDRVAGTSVASKAGFTTQALQRARINPDTWAPLAGFPFNQNTVQAVYDYYRDTYLANQDDFVWLGMARMAGGAVWDGLITGEQAITLLRAALANPLQTWQDRLGNLYALEIAERQQVMFVEMQKAIFEDLAWQHELYADAGYAAFEILRTHTPKDVPSDVDTVWKQIDAGDVVRGNFALVPREQNYILQPYWDQFTAAFGMQGVVIGQGTRSPLPNGLPFASTPGLGLFPNVAWWPDRERWIELDMWPKWLDYIKRERADLVKAGLGTQLGPAFVSPI
>NC_017080.1|WP_154661768.1|1204635_1205232_+|hypothetical-protein
MICDLTSSVFSLTFAFVIATATGCGKMEKPPVEIVVRTLEDRWLDASPPFRTLEWTGFTVNSSHEAGIVTIGPPDMTAPVARYAYRTVYKKERWSPESLGYYLFAGRDVMEAPEVSELALSLIRATGRTVSEREATALEELVTGIAYREISDGSASLSIYKDLDTPNGISLDVSRRPRGKPELTLDLYLRISDPDPLW
>NC_017080.1|WP_014436400.1|1205536_1206622_+|hypothetical-protein
MARSLRHQILPDATCVVHVVSKISRSLHLLVPDEDRAGAGAVGDAAEHPDLRKELLLQRLETLAEQTSISVCGFAVMDNHVHLILRRDKEEAAAWSAAEVVGRWLALHPKRNRARQPVETPEEDLAAMVADAGLVEALRGKLSSVSQFMKDLKQRTAEAVNKLEGRGGRLWDGTFKSKLIEDQEQLVATMVYVDLNPFAAGVCETPEEGRHTSLAGRLGRDEPAGEVSKPAGSADRDREEASEAGGPRVGLRLPRRRSSGAWLRPLDESAQRARKRGQRRHPRGRAGLKAEAAGTVSPGLSLQIYLRILDAVSRKLRAGKKRLAAGTASVFERLNLDADAVVGRVLAMAQRDGLAVAGRGS
>NC_017080.1|WP_014436401.1|1207063_1207591_+|hypothetical-protein
MPSRLPAALLLVLPLLLPACVAPTYVNIPSEGGIAASDPNSFNVRDVVADSIAAAVEREPLEGVYEILLPEGTTQQTYQAVVRQIGGGAIAPDTLRDRPVPSVRVVAVRIRNQDAEVDVVRPSPTGRSVVRVFLKWYYGGDWAVQRVKPLRIPAEELLLRTATPPPPPDAEDSGE
>NC_017080.1|WP_014436402.1|1207587_1208565_+|hypothetical-protein
MSRRARLALAACAATLGCGPAAAQEEPPERLPTATGMAAVEPLHAATPQPLLRREGDFIVGRTARIVELADGALAAVFDRPDVVEERPLGEATGVDDEGFLAAPPPPEPAPLLPPMVLQPSRQLDALRAVRAGGEPDAAFALSGRVQRYRGRNHLLLTGFEGRMEAPEAAAAAGAPAAAAAAAAEFEDPATESVEALMADLDEAARPAAAGPRSPGPTPPAAASPSDAAGWRDGALVARRLGRVLPGSSGGSLAGSVFVFDGGDPPLRLLPCAATERAETLELGDGGGRVFELSGQVHVSGQDAWVLPASLRSRPAAGRVDEADY
>NC_017080.1|WP_014436403.1|1208586_1209009_+|YjbQ-family-protein
MESFTVDTPGRDGMVEITDRVAQAISRSARRGGVAQIFVMHTTAGLCVNENADPDVVHDLLKEFDRLFPWEQPFHRHAEGNTAAHAKAILTGNSIAVPLRRNGRLDLGTWQGIYLCEFDGPRTRTVKVVVLEEANDDKID
>NC_017080.1|WP_014436404.1|1209144_1210191_-|tRNA-epoxyqueuosine(34)-reductase-QueG
MIETLDALAAKIGFGLWGVADAAPAPAEEAARSRAWFAAGRAGEMGWLADSAEARLGVEAVLPGARSVVIVADSYGNTQPAGGSADRPEVAARNGSVRGRIARYAWGRDYHRVLKKKLHRLGDGLAAAFPDAAFRACVDTAPLDERRYAEAAGLGWRGKNSLLIHPRHGSFVLLGALLTTLELPTSAARGFPGPLAEPTDRCANCTRCIDACPTGAIDAGGHAIDPRRCISYLTIERRSVDPPGAAPDTHGWLAGCDVCQDVCPFNAIGTRHPLPVPLDFAPRPHAAGLDPAEVAGWTRADRLAATAGTALIRIKLPMWKRNAEAAEASRAASSKAEDAADLRQSPKR
>NC_017080.1|WP_014436405.1|1210187_1210922_-|hypothetical-protein
MSEAAAEAAGGERLGAPERRSGLVAAARANLGPGLALTAFAIAVLLGYELWPPMRAALQRLAGWRAEQPLPVALGFAALTTTLAGAVLPAAVQRLRPSAPSESPGAFLYLLLFWAVVGLQVDLLYRGLDGLLGDGRGPAIVAGKVFLDMFVYCPLWAMPETVAVYGFKDAGFSWSRFRRRHAGRGWYRREVFPLLCSCWAVWIPAVCVIYLLPLPLQLPMQNIVLAFWCLMLGLLAAPEPEDAA
>NC_017080.1|WP_014436406.1|1210918_1212187_-|DUF4126-family-protein
MLLPALSLPALFASRVFLPLFAVALAVRFGPDVPLLGTLGLLAGLPVDAAPGWLTSDLSIAVLGTLSALELVAHKSGGAREILNELDPYVKPVSAALGVAGLVSAAGGWPAAEGVAAASLPAQAGLGFTGLLVLAVAAGTFLLAVARRAVLSDASELDADDDTGLLGLFSWGEDLWSVFGVFLLVLFPVVVAALVVIASCVVLLMYARSRRREARSRVACDACGDDVPRAALRCPHCGVERPDAERVGLLGGPKMQRVGDRRDHAASLRAVHRCGVCAASLRERHPEQDCRLCGRPAFAGTADVAGLDAHVKARLPWVLAACAGLSAVPVVGLIPGIILYRLALIAPYRRYLPRGRTLLVRWGVRLGYLLLIFVQLWPGAGTLAVPAMALLAWSSYRRSFLSLAAESVPAASGPASSAALPA

Crispr_ID: NC_017080_4

• CRISPR_ID: NC_017080_4
• CRISPR_location: 1248153-1248248
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_017080_4

Consensus_repeat	Method
TCGCTTCTTCGCTTGGTCGGCGCAGCCGACGC	CRISPRCasFinder

spacers of NC_017080_4

>4.1|1248185|32|NC_017080|CRISPRCasFinder
GCCCTGCCTGACTCACTCACTTCCTCACTTCC

CRISPR arrays and Neighbor proteins around NC_017080_4

CRISPR arrays

The CRISPR arrays of NC_017080_4

>merge|NC_017080|4|1248153-1248248|CRISPRCasFinder
TCGCTTCTTCGCTTGGTCGGCGCAGCCGACGCGCCCTGCCTGACTCACTCACTTCCTCACTTCCTCGCTTCTTCGCTTGGTCGGCGCAGCCGACGC

>NC_017080|4|3|1248153-1248248|CRISPRCasFinder
TCGCTTCTTCGCTTGGTCGGCGCAGCCGACGC	GCCCTGCCTGACTCACTCACTTCCTCACTTCC
TCGCTTCTTCGCTTGGTCGGCGCAGCCGACGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_017080.1|WP_014436430.1|1242405_1244040_-|ribonuclease-Y	unknown	unknown	gnl|CDD|237177
NC_017080.1|WP_014436432.1|1244396_1245164_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436445.1|1256393_1256993_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_053230077.1|1241463_1242069_-|DUF3465-domain-containing-protein	unknown	unknown	gnl|CDD|314772
NC_017080.1|WP_014436426.1|1238332_1239217_+|hypothetical-protein	unknown	unknown	gnl|CDD|274008
NC_017080.1|WP_014436442.1|1254303_1254951_-|hypothetical-protein	unknown	unknown	gnl|CDD|274750
NC_017080.1|WP_014436425.1|1237125_1238190_+|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|237512
NC_017080.1|WP_041377969.1|1254947_1256015_-|anthranilate-phosphoribosyltransferase	unknown	unknown	gnl|CDD|234682
NC_017080.1|WP_041377968.1|1242081_1242276_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436441.1|1253600_1254149_+|fasciclin-domain-containing-protein	unknown	unknown	gnl|CDD|225214
NC_017080.1|WP_014436438.1|1252290_1252584_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436446.1|1257197_1257566_+|hypothetical-protein	unknown	unknown	gnl|CDD|368199
NC_017080.1|WP_014436433.1|1245196_1246861_-|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NC_017080.1|WP_154661771.1|1251786_1252176_-|DUF3568-family-protein	unknown	unknown	unknown
NC_017080.1|WP_014436427.1|1239555_1240488_+|RsmB/NOP-family-class-I-SAM-dependent-RNA-methyltransferase	unknown	unknown	gnl|CDD|223222
NC_017080.1|WP_014436434.1|1246949_1247975_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436440.1|1252956_1253406_-|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl|CDD|376583
NC_017080.1|WP_014436428.1|1240521_1241370_-|DUF4190-domain-containing-protein	unknown	unknown	gnl|CDD|379388
NC_017080.1|WP_014436444.1|1256172_1256394_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436439.1|1252700_1252913_-|dodecin-domain-containing-protein	unknown	unknown	gnl|CDD|377810

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_017080.1|WP_014436430.1|1242405_1244040_-|ribonuclease-Y	gnl|CDD|237177	PRK12704, PRK12704, phosphodiesterase; Provisional.	0
NC_017080.1|WP_014436428.1|1240521_1241370_-|DUF4190-domain-containing-protein	gnl|CDD|379388	pfam13828, DUF4190, Domain of unknown function (DUF4190). This integral membrane domain is functionally uncharacterized. One of the membrane helices contains two GXXG motifs that are usually associated with dimerization.	2.87559e-10
NC_017080.1|WP_053230077.1|1241463_1242069_-|DUF3465-domain-containing-protein	gnl|CDD|314772	pfam11948, DUF3465, Protein of unknown function (DUF3465). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 131 to 151 amino acids in length. This protein has a conserved HWTH sequence motif.	1.68349e-35
NC_017080.1|WP_014436426.1|1238332_1239217_+|hypothetical-protein	gnl|CDD|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	1.62271e-07
NC_017080.1|WP_014436442.1|1254303_1254951_-|hypothetical-protein	gnl|CDD|274750	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ. This family describes a protein family, YeaZ, now associated with the threonylcarbamoyl adenosine (t6A) tRNA modification. Members of this family may occur as fusions with ygjD (previously gcp) or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI. [Protein synthesis, tRNA and rRNA base modification].	1.2698e-12
NC_017080.1|WP_014436425.1|1237125_1238190_+|HEAT-repeat-domain-containing-protein	gnl|CDD|237512	PRK13800, PRK13800, fumarate reductase/succinate dehydrogenase flavoprotein subunit.	3.3409e-06
NC_017080.1|WP_041377969.1|1254947_1256015_-|anthranilate-phosphoribosyltransferase	gnl|CDD|234682	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional.	3.0386e-148
NC_017080.1|WP_014436446.1|1257197_1257566_+|hypothetical-protein	gnl|CDD|368199	pfam04931, DNA_pol_phi, DNA polymerase phi. This family includes the fifth essential DNA polymerase in yeast EC:2.7.7.7. Pol5p is localized exclusively to the nucleolus and binds near or at the enhancer region of rRNA-encoding DNA repeating units.	1.44974e-08
NC_017080.1|WP_014436441.1|1253600_1254149_+|fasciclin-domain-containing-protein	gnl|CDD|225214	COG2335, COG2335, Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane].	3.68657e-59
NC_017080.1|WP_014436433.1|1245196_1246861_-|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.11753e-55
NC_017080.1|WP_014436427.1|1239555_1240488_+|RsmB/NOP-family-class-I-SAM-dependent-RNA-methyltransferase	gnl|CDD|223222	COG0144, Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis].	1.27963e-71
NC_017080.1|WP_014436440.1|1252956_1253406_-|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl|CDD|376583	pfam01641, SelR, SelR domain. Methionine sulfoxide reduction is an important process, by which cells regulate biological processes and cope with oxidative stress. MsrA, a protein involved in the reduction of methionine sulfoxides in proteins, has been known for four decades and has been extensively characterized with respect to structure and function. However, recent studies revealed that MsrA is only specific for methionine-S-sulfoxides. Because oxidized methionines occur in a mixture of R and S isomers in vivo, it was unclear how stereo-specific MsrA could be responsible for the reduction of all protein methionine sulfoxides. It appears that a second methionine sulfoxide reductase, SelR, evolved that is specific for methionine-R-sulfoxides, the activity that is different but complementary to that of MsrA. Thus, these proteins, working together, could reduce both stereoisomers of methionine sulfoxide. This domain is found both in SelR proteins and fused with the peptide methionine sulfoxide reductase enzymatic domain pfam01625. The domain has two conserved cysteine and histidines. The domain binds both selenium and zinc. The final cysteine is found to be replaced by the rare amino acid selenocysteine in some members of the family. This family has methionine-R-sulfoxide reductase activity.	1.85264e-70
NC_017080.1|WP_014436439.1|1252700_1252913_-|dodecin-domain-containing-protein	gnl|CDD|377810	pfam07311, Dodecin, Dodecin. Dodecin is a flavin-binding protein,found in several bacteria and few archaea and represents a stand-alone version of the SHS2 domain. It most closely resembles the SHS2 domains of FtsA and Rpb7p, and represents a single domain small-molecule binding form.	2.14843e-32

Protein sequences

>NC_017080.1|WP_014436434.1|1246949_1247975_-|hypothetical-protein
MNPFAPTAAERRGRKRTLFGLVLLLLAAATLAATAWPAVDGLGWPAWAGGAGGAGGEAADRGAGAAETAAVRGSGSGGWGWGWWCSVLRLHLGLLAFVLLLPALATKRLLSASLAGLALAANLLVVAAVPVRGGWPAAAEALWSGPPEAATWTVLHAHLAGADRLDDLASEVARLEPDAVTAAGARPGVAQTVTPLLDGYRLAGSRPAAGDDGLAVWVRRDVKSGAARPDGPAALAADLERGDDRLRLVVSTGPPPPRPEGVDAPILAVGGFGLAPWSVVAADRKLRLLPPGHVRPWPPPLDHAWADLPAGWSATATAGPAIDDEPFALHRPLRVRLAEPR
>NC_017080.1|WP_014436433.1|1245196_1246861_-|HAMP-domain-containing-histidine-kinase
MPPSLPNLPTIRLSLAAKCQLLFGLAVLLILTAALLVVGLRMQALVTEGPLRRSRDLAGLYLDGRIDLAAPPGPGATGEAAGLVLGRVDDAEVDGLSDTNPFLAAAAERFRADPAAVELGEAAEDADGTRFYRYARAIRGVPPADDPGDPGDPEAAEPPAPLAAVLLVEIRDSEVAAQLLRNRVYIVAAGLLAGLLAITTFWFVTTRLVLSPVRVLRGYALRVANGDLSLRSDINTGDEFEQLSDVFNQMLDGLKNKQDQLFRVNKSLDLKLVELAESNVTLYEANKMKNEFLANVSHELRTPLNSIIGFAEVLQSSLDAEEAERPRNDSAAQAEKRQRYAGNIILSSKRLLELINDLLDLAKIEAGRLEVRLAPVSLRDTCEGLAALIRPLAEKKNVAVKVRLEPGLPTLTTDAGKLQQILFNLLANAVKFSPPGGVVTLGVGEEDATGRLLFRVSDQGPGVAPEDQERIFEKFIQLETSVTRAHGGTGLGLTISRELAELLGGTIHVQSRGPSAETPRSDGGPRRTLTTRDGPGPGATFLLTLPRNRPSGRR
>NC_017080.1|WP_014436432.1|1244396_1245164_-|hypothetical-protein
MLCEACGYTLASDRRSPRPVACPECGLDAAASDGAARTGPPWARRMAASTFLQTAGGLLRGPRGFYARLDPAAAGLPPRLYLLANATAIGCVWSLTEKLWFGRPPVLAWGHGMVAAQAVVALTYLEVLGVALFSRVRGWRVPLALAEKVACYAAPGWLPGVVIALAVGRVAQNGGLGRTLARITGDPLLGVTLGPAALILAALLVVLPFESLVYRGVRAVRFANTRGAAGRPATPRRPPPATGPGGCGDASAASG
>NC_017080.1|WP_014436430.1|1242405_1244040_-|ribonuclease-Y
MNTDPLTPSLAVLSEPQNLWLVLFALAGGLILGYVVSRQSGARSLAATRREIETKLAAAEQEGRIRAKQIELDARNAVAERREGLEKELQGDRDKLVESQRRLTKREDLLDTKLATLAARERAMGEQDERHERLKAALAKREDRINGCERELAAERAAFDKEHRETLLRAARMSEEEAKREALTALTNACQEEAAAIVKASQERAAADAKQEAMRITLEAIQRYASEHSAESTSNTVKIEDDAMKGRVIGREGRNIRAFEAAMGVDVVVDDTPGIITVSCFDPVRRATATEALTILLKDGRIHPARIEEVVEKVSEDFTERIQKFGRDAANEVHLPGLHPRVIEAMGRMHYRTSYGQNILRHSVEVAFLCQVIADELGLDGALARRCGFLHDLGKAMDHDVEGGHPRIGADFLRKHGERSEAVLNAVEGHHNDVIATTPYTPVVMAADAISGARPGARRETMEKYVKRLRELEGIARRTRGVREAYAIQAGREVRVIVDPHGIDDAGCHVMARSIAQRVSDEMSFPGEIKITVMREMRTVDFAR
>NC_017080.1|WP_041377968.1|1242081_1242276_-|hypothetical-protein
MKMTPSAAGSRRARTAAVVIALSFGLVLALLRLGGVIGGSAPATPGAPAGSAEQRVPTPPDPSR
>NC_017080.1|WP_053230077.1|1241463_1242069_-|DUF3465-domain-containing-protein
MAKPKRDARKTGAAGWGRTLLTLLPPVLKLLRAVFRKRSGGTGRAPARPAGRGNMRPGPRGPSPAMKRAKERQKAGRREGRTAPPKRVKPRRGEDPLTALQRAGAEGHWTRGDGVVFRCLPDDLDGSRHQRFLVKLSDGHVIKVSHNIDLAERVPAQEGDRLGFAGDFESNELGGALHWTHLDPRGWHPDGWIDHRGKRYE
>NC_017080.1|WP_014436428.1|1240521_1241370_-|DUF4190-domain-containing-protein
MDRRDEEFLSRRGLDDRFDRSEHAEREATRPGTSRLAIASLALGIVGLVTACFLVGVPIGVVAVVLGVVALFRVGRPGQRAGGRGLAVAGVVLGSITTLLAVAIGVAMVGPVVEITRSAVQQAEATQQARALAEAIQRATDDAGPGAARVTDPAALLAGGHLPDPAVFLTPSGPAAELPAGFAALPLEQQARFLRVHASLIPVPLPADASPDAIAVFSVPNLWPALEQLALAAPGQTAGTFVVATAGGSPRVEADADAVAASVRTSTGKRLAEVVADFRRGG
>NC_017080.1|WP_014436427.1|1239555_1240488_+|RsmB/NOP-family-class-I-SAM-dependent-RNA-methyltransferase
MREAGFPEAWIQRLPGLVPAERLQAAAEHFLAPRPVALRVNTLRLEPRTAAAALARDGLPAEPVAWSAAAFTVDPRRRALLVRHPLVEQGDVYPQGLASQLAAFVLDPRPGEAVLDLCAAPGGKTLDLAARLGPGADLAAVEASKPRFFRLRANLERAGAGSVRTYLHDGRRTGDKVPGRFDAVLLDAPCSGDTRLRGGDDPSAWSVSKARRLGRKQRDLLASAIRCTRPGGRVLYATCSMCPEENEAVIDAALRGGAVAAEPVELPAGLAIPGLGAWRSETFDAGVTRARRVLPAGPHEGFFLALLRVR
>NC_017080.1|WP_014436426.1|1238332_1239217_+|hypothetical-protein
MSPLTKAFVVLVTLLSILLVTLVVPFVAGVSDLQQELTIEQQKSRSAEVTASNLSDRLVAAESAQAGLQQSLNETISDLESRNAEVAAERNDLRARLAAAQTGQQEMQATLAALSENDRTKTQLLDTYAGKLEEAQQSLVEQSRRNAELTDRTNELSNERTQLTRSVQRLKERSTELSEQLAAASSALASAGVEVPEAAASGLAAAPVPAGERIFGQVTGIEDATGGRVLVQMNIGASDGVRNGQRFVAFRGDDQLVGTLEVRSVDDTVSVASVVSQQQPLRPSDSIVSADGIF
>NC_017080.1|WP_014436425.1|1237125_1238190_+|HEAT-repeat-domain-containing-protein
MLHARLLLAAALCLVPASVAPAPAAAQQPEAAATAPADPDAAAVAVILRASRSDRAELRANAVEAIQHAPDRALPLVQAALEDENAGVRFAALYVVGRQKMDDLGPAVERKLAAGDEPNPSVRAAVVFAAAQLGLADDATLSRMARYLFHDDPRVRANAVLLMGEMKQPGAATMLRHASAKPAGDRHPQIEWALLRLQVAEALAKGGDAPPDPTSVAPELTGDSAGAGIRAVRAAAYSTFDEVRVLAVQALGRLGDEAFWGNLNNFLNPDDAQPVEFKLAAARSLADLGRGDRGLFVALPAAEHELPTVRAQAAFALGAMDAAEARSALAGLLSDPAEPVRLAAAAAWLERSGS
>NC_017080.1|WP_154661771.1|1251786_1252176_-|DUF3568-family-protein
MTRAPRFLFAPLWAWCLLASLAAIGGCQTRQPGVKSAFGSQYAIVASTVADTTEAAAAVLEEMGLEEVTATATDVDGEITGFTRERTRVEVYAAQEDPTRTEVSVMVGAMGEAAVGTEIIARIREKLGR
>NC_017080.1|WP_014436438.1|1252290_1252584_+|hypothetical-protein
MPFCVTEAARDELIEMLERVDAPDSRTARFVVRGDRLRLTIDQRRRGDVRVDHAGRTVLVLGPDVADLLDGQQLDKADLGSGGRLKRRGLTITAQGG
>NC_017080.1|WP_014436439.1|1252700_1252913_-|dodecin-domain-containing-protein
MDHIYKKVELVGSSENSIEEAIENAIARADQTLKNLGWFEVVETRGHLQDGKVVHYQVTIKVGFTLDGTT
>NC_017080.1|WP_014436440.1|1252956_1253406_-|peptide-methionine-(R)-S-oxide-reductase-MsrB
MSDLPEARPADDAAYRERLDPNEYRILRESATEPAGSGRYLNQEAAGLYCCAACGNALYPSSTKFHSGCGWPSFFEEIRPDAITLHEDLAFGMRRTEMRCAACGSHLGHVFNDGPRDKTGKRHCVNGACLVFVPEGEDPAEAVEAHWNR
>NC_017080.1|WP_014436441.1|1253600_1254149_+|fasciclin-domain-containing-protein
MRTPTRPLAASALALAAGVFAGTAAPAATAAPPAADLGHHEGKHAKKDLVGTALENGSFTTLLAAAEAAGLVETLKSEGPYTLLAPTDAAFAKLPAGAIADLLKPENKEKLKSVLLYHVVDGKALAEDVSGMSEVETLEGSMVEVSTEDGKVMLNDATVEAADVMASNGVIHVIDTVLMPEG
>NC_017080.1|WP_014436442.1|1254303_1254951_-|hypothetical-protein
MSGAAPENGWGLVIDHGGRGARVGLARGDEALSEARTAPARRHHVDVLHAADGLLRAAGSVPADLAWVGWARGPGSFTGLRVAAATVQVLRLARGARAGVAPLRIAGIPTAEALLAAHPGAAVALAVKRDTAWTAAAGVAPGLRPLAEARALGRPLLADPPHGDAAPVVDLAVLFRLARAAVGAGRCDRPEDARPLYPRQPEAVTIWAQNQPDAT
>NC_017080.1|WP_041377969.1|1254947_1256015_-|anthranilate-phosphoribosyltransferase
MHRILSHLVTGQPLSHEDAREAFDTVMDGGATPPQIAALLSMIQVRGATVDELHGAAAAMRARAVGVPMPRNRTGIDIVGTGGDHAGTFNVSTSAAIVTAAAGREMGLGVAKHGNKAVTSRSGSSQALEALGVTLGGPVQTLSRCLDEAGIAFFHAPAHHPAMRFAGPVRADLGFRTIFNLVGPLTNPAGVRRMLLGVYTRRLVRPMAEVLGRLGVDHALVVSGLIPDADGSHTDGLDEVSTCGPTHACRVRSGGPGEPPTLKDEEIDPSDLGLSWSHPAALRVDGPEASAAVIRRVLDGEDGPCRDIVILNAAAALQVGGCVESLAEGLTAASQAIDSGAGRRTLADLVRLSAG
>NC_017080.1|WP_014436444.1|1256172_1256394_-|hypothetical-protein
MPASLATYRPFIDPLDVDGWWPLLLLPLLFAVALVYKTLKLPTLDRLVPESLKLAGEVLAAMVALALLLRWLT
>NC_017080.1|WP_014436445.1|1256393_1256993_-|hypothetical-protein
MPHTPDAQSAAAGSPAAAAAAGAGEPRDRPLAQHLLAAAVAWGFPGLGHLLLGRTHRGLVLAVAITTLFLAGLLIGGVAVVDRRDHPAWFISQALVAPAFLVDAHHQKLRDRAVRAVNRPGGEAAVAAYAPSFGRSQEQGTLYTAAAGLLNLLAILDVAHRRPSHERRRGPRRRSDGAAPAEPPAGAPSPAADPAGPAA
>NC_017080.1|WP_014436446.1|1257197_1257566_+|hypothetical-protein
MFRPDTDADATPTDPASPGGWAAPGSDRLGDAPWPARGGFLTGGAPAPDRPGGVPVASPSDDTAAASAFQAARLDEEDDFEEDYYDEDEDEDEDDVYDDEEIDDDDDLLDEDDDEEFDFEDD

Crispr_ID: NC_017080_5

• CRISPR_ID: NC_017080_5
• CRISPR_location: 1499690-1499790
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_017080_5

Consensus_repeat	Method
CGACGCCCGCGTCCGCGGCGCCCGC	CRISPRCasFinder

spacers of NC_017080_5

>5.1|1499715|50|NC_017080|CRISPRCasFinder
TTCGCGACGCTCGACGAGGCGCTCTGGCTCGCGGTGCTCGGGCTCGACGC

CRISPR arrays and Neighbor proteins around NC_017080_5

CRISPR arrays

The CRISPR arrays of NC_017080_5

>merge|NC_017080|5|1499690-1499790|CRISPRCasFinder
CGCCGCGCTCGACCGGGTCGACCCCTTCGCGACGCTCGACGAGGCGCTCTGGCTCGCGGTGCTCGGGCTCGACGCCGACGCCGTCGACCGGTACGCCGACC

>NC_017080|5|4|1499690-1499790|CRISPRCasFinder
CGCCGCGCTCGACCGGGTCGACCCC	TTCGCGACGCTCGACGAGGCGCTCTGGCTCGCGGTGCTCGGGCTCGACGC
CGACGCCGTCGACCGGTACGCCGACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_017080.1|WP_014436663.1|1512508_1513204_+|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl|CDD|133475
NC_017080.1|WP_014436642.1|1487158_1488544_+|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl|CDD|237001
NC_017080.1|WP_014436656.1|1504701_1505229_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|225695
NC_017080.1|WP_014436651.1|1497416_1499033_+|sigma-54-interacting-transcriptional-regulator	unknown	unknown	gnl|CDD|273817
NC_017080.1|WP_053230088.1|1511219_1512506_+|family-10-glycosylhydrolase	unknown	unknown	gnl|CDD|224563
NC_017080.1|WP_014436666.1|1514321_1515152_+|DUF1559-domain-containing-protein	unknown	unknown	gnl|CDD|225076
NC_017080.1|WP_014436653.1|1500995_1502075_-|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl|CDD|349906
NC_017080.1|WP_041377991.1|1502479_1504648_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436646.1|1491628_1492612_+|aldo/keto-reductase	unknown	unknown	gnl|CDD|381312
NC_017080.1|WP_014436645.1|1489963_1491148_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436657.1|1505300_1506323_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_017080.1|WP_014436649.1|1496289_1496688_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436659.1|1508560_1510408_-|heparinase-II/III-family-protein	unknown	unknown	gnl|CDD|377945
NC_017080.1|WP_014436648.1|1493413_1496035_-|hypothetical-protein	unknown	unknown	gnl|CDD|236624
NC_017080.1|WP_154661783.1|1496794_1497241_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436658.1|1506523_1508452_+|glucosamine-6-phosphate-deaminase	unknown	unknown	gnl|CDD|235005
NC_017080.1|WP_041377992.1|1513279_1514074_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436644.1|1489393_1489882_+|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl|CDD|376377
NC_017080.1|WP_014436643.1|1488600_1489197_-|DUF421-domain-containing-protein	unknown	unknown	gnl|CDD|225205
NC_017080.1|WP_053230086.1|1492608_1493394_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl|CDD|133009

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_017080.1|WP_014436666.1|1514321_1515152_+|DUF1559-domain-containing-protein	gnl|CDD|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	2.77267e-08
NC_017080.1|WP_014436642.1|1487158_1488544_+|2-oxo-acid-dehydrogenase-subunit-E2	gnl|CDD|237001	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.	1.04416e-149
NC_017080.1|WP_014436656.1|1504701_1505229_-|GNAT-family-N-acetyltransferase	gnl|CDD|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	1.23229e-09
NC_017080.1|WP_014436663.1|1512508_1513204_+|N-acetylmuramoyl-L-alanine-amidase	gnl|CDD|133475	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of the conserved histidines and a cysteine are zinc binding residues. Site-directed mutagenesis of T7 lysozyme indicates that two conserved residues, a Tyr and a Lys, are important for amidase activity.	4.48417e-19
NC_017080.1|WP_053230088.1|1511219_1512506_+|family-10-glycosylhydrolase	gnl|CDD|224563	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown].	1.21944e-70
NC_017080.1|WP_014436653.1|1500995_1502075_-|M20/M25/M40-family-metallo-hydrolase	gnl|CDD|349906	cd05656, M42_Frv, M42 Peptidase, endoglucanases. Peptidase M42 family, Frv (Frv Operon Protein; Endo-1 4-Beta-Glucanase; Cellulase Protein; Endoglucanase; Endo-1 4-Beta-Glucanase Homolog; Glucanase; EC. 3.2.1.4) subfamily. Frv is a co-catalytic metallopeptidase, found in archaea and bacteria, including Pyrococcus horikoshii tetrahedral shaped phTET1 (DAPPh1; FrvX; PhDAP aminopeptidase; PhTET aminopeptidase; deblocking aminopeptidase), phTET2 (DAPPh2) and phTET3 (DAPPh3), Haloarcula marismortui TET (HmTET) as well as Bacillus subtilis YsdC. All of these exhibit aminopeptidase and deblocking activities. The HmTET is a broad substrate aminopeptidase capable of degrading large peptides. PhTET2, which shares 24% identity with HmTET, is a cobalt-activated peptidase and possibly a deblocking aminopeptidase, assembled as a 12-subunit tetrahedral dodecamer, while PhTET1 can be alternatively assembled as a tetrahedral dodecamer or as an octahedral tetracosameric structure. The active site in such a self-compartmentalized complex is located on the inside such that substrate sizes are limited, indicating function as possible peptide scavengers. PhTET2 cleaves polypeptides by a nonprocessive mechanism, preferring N-terminal hydrophobic or uncharged polar amino acids. Streptococcus pneumoniae PepA (SpPepA) also forms dodecamer with tetrahedral architecture, and exhibits selective substrate specificity to acidic amino acids with the preference to glutamic acid, with the substrate binding S1 pocket containing an Arg allows electrostatic interactions with the N-terminal acidic residue in the substrate. The YsdC gene is conserved in a number of thermophiles, archaea and pathogenic bacterial species; the closest structural homolog is Thermotoga maritima FrwX (34% identity), which is annotated as either a cellulase or an endoglucanase, and is possibly involved in polysaccharide biosynthesis or degradation.	1.48583e-113
NC_017080.1|WP_014436651.1|1497416_1499033_+|sigma-54-interacting-transcriptional-regulator	gnl|CDD|273817	TIGR01817, Nif-specific_regulatory_protein, Nif-specific regulatory protein. This model represents NifA, a DNA-binding regulatory protein for nitrogen fixation. The model produces scores between the trusted and noise cutoffs for a well-described NifA homolog in Aquifex aeolicus (which lacks nitrogenase), for transcriptional activators of alternative nitrogenases (VFe or FeFe instead of MoFe), and truncated forms. [Central intermediary metabolism, Nitrogen fixation, Regulatory functions, DNA interactions].	4.20753e-155
NC_017080.1|WP_014436658.1|1506523_1508452_+|glucosamine-6-phosphate-deaminase	gnl|CDD|235005	PRK02122, PRK02122, glucosamine-6-phosphate deaminase-like protein; Validated.	0
NC_017080.1|WP_014436657.1|1505300_1506323_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	5.8899e-47
NC_017080.1|WP_014436659.1|1508560_1510408_-|heparinase-II/III-family-protein	gnl|CDD|377945	pfam07940, Hepar_II_III, Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.	2.30886e-07
NC_017080.1|WP_014436648.1|1493413_1496035_-|hypothetical-protein	gnl|CDD|236624	PRK09782, PRK09782, bacteriophage N4 receptor, outer membrane subunit; Provisional.	0.00498541
NC_017080.1|WP_014436646.1|1491628_1492612_+|aldo/keto-reductase	gnl|CDD|381312	cd19086, AKR_AKR11C1, AKR11C family of aldo-keto reductase (AKR). Bacillus subtilis uncharacterized oxidoreductase YqkF is a founding member of aldo-keto reductase family 11 member C1 (AKR11C1). It may function as oxidoreductase. This family also includes Bacillus halodurans AKR11C1, an NADPH-dependent 4-hydroxy-2,3-trans-nonenal reductase.	2.76287e-86
NC_017080.1|WP_014436644.1|1489393_1489882_+|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl|CDD|376377	pfam00731, AIRC, AIR carboxylase. Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.	2.51932e-82
NC_017080.1|WP_014436643.1|1488600_1489197_-|DUF421-domain-containing-protein	gnl|CDD|225205	COG2323, COG2323, Predicted membrane protein [Function unknown].	1.69329e-28
NC_017080.1|WP_053230086.1|1492608_1493394_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl|CDD|133009	cd02516, CDP-ME_synthetase, CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.	6.5643e-57

Protein sequences

>NC_017080.1|WP_014436651.1|1497416_1499033_+|sigma-54-interacting-transcriptional-regulator
MARAERELDIIEGISQILGENLLLEQVFQRAMLLLSENLGVQRAALVLLDPLSGQLRTFASVGLTPTEQERGRYAVGEGITGRVMKSGEPAVLADVTKDPDFLNRTGARSLGEDDGPMGEAPASAVSFICVPVRDGDLTVGTISIDKPLESEEQLAADARLLRIVAGMFSQVIRIHDQVRLERDQWQQEEKRLRDNLRSRYKFDNIIGSSPAMLDVLGTIGQVADSRATVLLLGETGCGKELIAKAIHYNSPRESGPLIRVNCGALSPQLLESELFGHVKGAFTGAVRDKIGRFEAADKGTLFLDEVGTLEPQLQVKLLRVLQEREVERVGDHRSRKVDVRVIAATNLNLEAEVERGSFREDLYYRLNVVTVNLPPLRTRREDIPALVEHFLERYNKENGRDLSRVSRETLSTFLRYPWPGNVRELENMIERAVVLSTSNELTPELLPLAIRMFAAQTRGDGADASIDGLSERLAEAAVRQYAASDGRVYELVIQQIERHLLKHALRHNGGVKIRTADFLGINRNTLNKKVKELSLEG
>NC_017080.1|WP_154661783.1|1496794_1497241_-|hypothetical-protein
MPSDPDRLFSTAPVSARIYPATRFVREGERSWLTLGVELLDGLGDPVKEVGVLRCRLLADPDVSTRPGPRGVLVPAPSPQGEALYAWDVRVATPEEQAEHWDPVSRCYVLELELDDFSVAYRPSRVRVDFEPAQGVPLAAEAAMTSLP
>NC_017080.1|WP_014436649.1|1496289_1496688_-|hypothetical-protein
MSHPTSNVKSPGVEPVSESFGPAQVHAVVCGILRFDKRYARLADRIADAVSQRWSGLKRPPRGQFPREWVASTLCWWLRECHRRPGSRAGGSGSGFSRPLSGPIAGMLRPYRLGGGVGPGCVLTAALHRRAA
>NC_017080.1|WP_014436648.1|1493413_1496035_-|hypothetical-protein
MPRVPPRSVLVLLLGLAWCCWRVPAAGVEADPGAAPLALPPAPAALERLMEAEADGPRAARRRIAHGRWPGLDPATLPAEEAAALLRAAGVRPDAWPAAVRSDAGNRVPAAAAWREHGRPLAALAHLGEEDPAERPPAERLLRAGCLFEVGRHGDAAGVLAALLDDPPQDPRIHAEALLLADRLGVAGPRATRRASALLDEATERAPLEAGPRRVQAQLLFDRDNRGGGGSALEAALARDPLDAASLRLLGEVALDGFDFDRVNAVVARLRGLTQRLGGGAPGAGRGHPFADALEARALLRADDPAGALAVIAAAGGERIDLLPLRAAAEAILDPASPAAAAALAACESAAPGGAAAYAVLGEVLSEARRYPASVAALREAIRRLPSDPGPHHTLGMTLAQQGDLPAAVAALRESVRLDPFQSDAANSLDLFERMLAWPVIETAHFRIRHAPGPDAVLAADMGRALEPMRADVTGFFDHEPARPTQIDLLPDAPSFAVRITGRPEIWTIAACTGDVIAMTPPRLGPEQAGAFHWLNVLRHEYAHTVTLDRTGNRIAHWLTEAAAVNAESVGRPYDQAKLLAAALRADALFAYEDLNWGFIRPEKPTDRPLAYAQSAWMLEHLMEVDGRPAMLRMLDAAARGAGDAEALRASTGLGPEAFLARFRPWAEAAVARWGLDKAPPEGEAAAAIGAARSAADPAAAAAARGALAALPAAEARHPDVLEAVARLEAAFGNPAAAEAAVERYALARPVDPWPQTALADLALAAGNADLAAAHLSVLERSDGMTARSARLLMELYSRDDRPAAALAAAQAALLRQPYDAGLREDAAALALRAGEPAEALFQVEQLVRLEPDEPLHRRRLEAVRNRVETSGG
>NC_017080.1|WP_053230086.1|1492608_1493394_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MSLRVAVILAAAGSGSRFGGPATPTGPTKVEEDLGGRPVFAWSLALLRARAGVVSVVLAVDPRRRDAFAARWPAELADAAGLAPVRVVAGGADRDATVRLALAAVPEDATHAAVHDAARPGIDDALLDRLFAAAAAGHDAVFPGVPVADTLRRVQAAGGGVARAGETVDRESLVAVQTPQLFAIGVLRRAHAATLPGPPTDDAGRVAALGVPVVCVPGDPRNVKLTTRADLATLEARVADAPSASGPPGGPAREPGPAGRA
>NC_017080.1|WP_014436646.1|1491628_1492612_+|aldo/keto-reductase
MRTRSLYTGGPAVPDVGLGCWQIGGGWAGDWDAAAAAGVLAAAYDAGVRFFDTADVYGGGASEEAVGRFVAGRDGCVVATKLGRAAGIFPGGYTEAALRSATEASLDRLGVERLDLTQLHCVPTGVLRRGEVFAWLRKQRDDGLIAAFGASVESVEEGMICLQDGGVSTLQVIFNAFRQDPLDELLATAAAAGVGVIVRLPLASGLLTGKLKQDTAFGAGDHRGFNRDGAAFNVGETFGGIPYERGVELSERFVEITRDAAGTPAQRALRWVLDHHAVSVAIPGASRPAQARGNAAASEMPELGGAVHGRLAALWRDEVAPHVRGPR
>NC_017080.1|WP_014436645.1|1489963_1491148_+|hypothetical-protein
MNAPRRRRLPAALLLAGLLPATAEASMSTGDTPALDVRLLDGTSLPSNVFAGHPVVVTFWAAGHPASVAALESLAALPPEAAGAAAFLGVALDADLALATDAAERVAGGDAWEHAFNGRQAEPVDTRFYDAPYGIPAVWLLDGDGRVTWTGHPDDLEPALAEAVTAAGDTPAWGPGVRAARIAWAGVLEAAGSRPEDLLDGAERLSELGELDAATAGPDAAANAAGVVAALAGQPGVERSRLKLAGDADPSGARALIRLRELAGDAAEADAAARRTRVDTLEAARRAEDRNDDAAAMASYAALVEEGPADAPEVIAAAERLEVFRAKGMTADAARAEADAAEAARRLLLARNYAENFREENAVEELEELLERFPESPSAAEAAELKAELEAMLR
>NC_017080.1|WP_014436644.1|1489393_1489882_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSQSCVVGVVMGSRSDWPTMEAAAAVLDRFGVPHEARVISAHRTPERMNRYAADAAGRGLRAIIAGAGGAAHLPGMLAAQTAVPVLGVPVQSRALQGLDSLLSIAQMPGGVPVATFAIGEAGAKNAGLFAVALLATTDAELAEKLAAFRREQAEAVGDDPRG
>NC_017080.1|WP_014436643.1|1488600_1489197_-|DUF421-domain-containing-protein
MHALARQPPPDASSWWLSDLPTLLAAAATTAVVYAAVILFCRIQGVRSFAKMSSFDFAMTIAVGSVIASTALAGTTSLLLGLVVLATLFASQAVVAVTRTRSKAAEDLIDNEPILVFRHGRMLPEGMAAARLTEDDLYAKLREANALQPSEVQAVVVESTGDVSVLHGDQPLDPSLLKGLVNHDAEGPRTAVDPPGKD
>NC_017080.1|WP_014436642.1|1487158_1488544_+|2-oxo-acid-dehydrogenase-subunit-E2
MPIQIEMPRLSDTMEEGTLVKWRVAVGDKVNAQDVIADVETDKATMEVPVFDEGTIARLAVDEGATVPVGEVMCVIAEAGEDVEAAAAAGGGEKKEAAAQPKESTEQRAEETSADGGADSIASSQDNAGPAASSSGSGGGRVKISPLARKLADEHGVDVNAIEGSGPGGRIIKRDVLEAAKGGGGGVSASAGKSEREAEPASTPAPKPVEAPSGVASHGVGPGLEAKTVQLSGMRKTIARRLVESKTGVPHFQVSVAVAMDELMSLRATINGQLKEQGVKISVNDFVMKAIAMSCVQHPVVNASFGGDEIVYHGSVNVGVAIALPISADGTGGGLLVATVRGVESKGLRAISNEVKTLAGKARSGGLSPQEMADSTIAISNLGMPQYGVTSFSAIVNPPNAAIIAVGAALEKAVVRDGQLAVGLEMSVTLSGDHRVIDGAVAGEYLATLRSMLENPASLLV
>NC_017080.1|WP_014436653.1|1500995_1502075_-|M20/M25/M40-family-metallo-hydrolase
MNLDLLKRLSETAAVPGREHRVRALLEEEAAGLFDTVTTDPLGSLVCVRSARGPAAEPPQRVMVAAHMDQIGFLVRFIDDDGFLRVQPVGGFDIRNLFARVVTICPDPADPSRDLRGLMNPGVKPVHLATEEDRKKLPDLTDLVIDTTLPAEEVKKRVKIGDMVVLDQPFVDLGPAVAGQAMDNRVACWALVEAVRKLEADATPHPCELHCVFTVQEEVGLRGALTSAYTARPHVGIAVDTTLCVDTPGGVPHQQTTAFGKGVALTVMDSASIADVGILQAFERLGEANGVPTQRSILMRGGTDAGSLQRAGVGARTFTLSVPTRNIHSVTEACHKADLEACRDLLALFLAEAVPSAPG
>NC_017080.1|WP_041377991.1|1502479_1504648_+|hypothetical-protein
MTRRRTAATGAFAAATGLLLLAAGAGGTPSGAAGVGAAVGWLGVLEAVLRSSGLLAGFWLSAWGLGGLLGPRVGTGQRLAVGAAALLLAGWLAAWLLGVSRGVAVGVAAPGWLLLIREARRRPVRRVRVARRPGSLAPLLLAPGLALLLLAACLPPGAVWGVEAFGYDALSYHLQIPREWLAAGRMAFLPHNVYASLPGLMEAAYALAMAALGVDPAAGPLAADRAALAAVPCQLLHAGFAVVAALCIREATDRRGVAGWAAGGAFLALPWVVVTGSSAYNEAAAIALGAAALGLVAADGGPRGPVPPAVRGALIGLLLGAACLAKPTAGFMLALPLGGWMLGRALLDPRNRVGSPCVPGLIARRRRSAALRSVAVATAVGSAVLSPWLLRNALWTGNPVHPFATSTLGLGHWTPELAARWAEAHARPAGAGLGVLWRQWLGNLGFAAVGGTPVAASVTDVARFGREGGFPILWLLAALGAGFAFSRRRTRGLAAGLVGLLAFQLAAWWLLTHHQSRFLVFTALPGAVAVGLLVARPARSCRRGPGVALAGLLAVLAVAVPAAAGFAVLWGQTRAFLDPATGRPVRAAPWELVGALAAPGVEGLDTHPLDALPPGSRVLVVADNGGLFYADTPIVYASAFDENPLAPLMDRAAGDPALLAADLRAAGITHVWIGWSELARLGATYGVDPRLDPAALGRITGGWPGERTPTRALLRVPPATTR
>NC_017080.1|WP_014436656.1|1504701_1505229_-|GNAT-family-N-acetyltransferase
MNVERHEELRLAPALDREIAELIGRVFPTDFGGRSFFQNRHHARFLVRVGGTLAGHLAVCHRAVRLGYRVLDVLGIAEVAVDPAFRRRGIGVALVEAALREGRAAGVDAVLLFGVESIYARAGFVAVKNPITRIDMRGVRTGEIVREEAEHLMVHPLGESGWDATAPLDLAGFTF
>NC_017080.1|WP_014436657.1|1505300_1506323_+|Gfo/Idh/MocA-family-oxidoreductase
MVNVGVIGLGSMGNTHLAAYGSVPGCRVVAVADADEGRRTGRTGAGGNIEGQGSGGGFDFASVRAYADASELIADPEVHLVDVCLPTPLHARFAVAALRAGKHLMVEKPLARTAAEADTIVAAAEEASAGGQIAMCGMCMRFWPGWVWLKEAIDDGRFGRVLHARFRRVTSHPPGSFYADGDACGGALLDLHVHDTDFVRHAFGAPEAVFSRGYAKHTSRPDHVCTQYLFGDGGPVVTAEGGWAMHEGFGFEMQYAVNFERATAVFDIHQDPVLTLIDGEGKRAVDIPGGMGYQPELAYLIGCVERGEAPSTVTLADAANALRIVEAEGRSIASGRIEAL
>NC_017080.1|WP_014436658.1|1506523_1508452_+|glucosamine-6-phosphate-deaminase
MSTTTHPVAATERIPVEIHPSSAEASAAVAAEIAQLIRTKRAAGGNAVLGLATGSTPTGVYDELIRLHREEGLSFKGVKTFNLDEYVPMAPDALQSYRRFMDEHLFDHVDFDEGDTHVPDGLLPVEDTAAGCARYEEQIQEAGGLDLQLLGIGRTGHIGFNEPGSGKDSRTRLIWLDRLTRADAASDFFGAENVPRRAITMGVGTIMEAKRIVLMAWGEGKAPVVAAAVEGPETPAVAASYLQTHPNATFVLDEAASAGLTRTRCPWLVGSVDWTPRRQRSAAVWLAQRAGKPLLKLTDEDYNESGLQELVAEHGPAYDVNLRVFRELQRTITGWPGGKPSERRRAGDVQREGDDVFPKRILIFSPHPDDDVISMGGTLIRLVDQGHEVHVAYQVSGNIAVFDADAVRFADFYSELAGTRGSSQEGVLKEVVDEVDAKEPGAVDGELLKSIKQIIRRGECRAAARLCGLPTDRLHFLDLPFYETGKVRKKPLSREDVDLTAALLERIKPHQVYAAGDLSDPHGTHRVCLAAVMQACERLKDEDWFEQTAVWLYRGAWQEWLPEQVDMAVPLSPAELLKKRQAIFKHESQKDRAPYPGTDEREFWERAEERNRNTARLYDRLGLAEYEAIEAFVQWSPGQEIG
>NC_017080.1|WP_014436659.1|1508560_1510408_-|heparinase-II/III-family-protein
MPTSADPAAPGPPPPSPPLASMPEVRAGHPRVIATPERLAALRAQRAGDAVLDALLRNVEARARACLDQPTLQREQVGRRLLRVSREALERITACALAFHTTGDGRFARRAEEELLAVAGFTDWNPTHFLDTAEMAAAVGLGYDWLFDTLSDDTRVALRGALQTKALRQRTASRHGWHWQLATHNWNPVGFGGLTLAALAIAEDDPAALAELLAAVREHNPRALQAMAPDGVHPEGPAYWSYGTTYQCLLLDALRTALGTDLGLAQEPGFLASGGFMAHARGPTGRSFNFSDSRERVSFTPAFLWVAEEANAPGWLAAWRAGGWEEATAADGRFRVFTPLWWLRLDPTALGEDAPRSWSGGGPNPVAFFRERWSDPGAMYLAIKGGRGSVSHGHLDAGSFVLDADGVRWAMDPGKVDYESIESQGIDLWDRAQGSDRWRVYHHRNEAHNTLTIGGALHRVDGFAPLIAVEPLAPPGENLPGVAALDLAAPLGASVATATRRFVFDPGPDRGVTVTDELTGLAPAAREEPVAWTLMTEAAVEVDGDSATLRRDGKMLRVEMTSSRAGRWHAEPAAPPAGLLGPPLPGVTRLRWTTSAAPDGTLRLEATLRPLDPLR
>NC_017080.1|WP_053230088.1|1511219_1512506_+|family-10-glycosylhydrolase
MQDLPLCGFLLACLTLGIGSAAAAPAGSSADNPALAVRSAETRQDRGTEAPEEFRAAWVATVANIDWPSKPGLATRRQKEELLDLLDDAQEIGLNALIFQIRPHADALYPSELEPWSPYLSGTMGEAPRPAWDPLALAIEEAHARGIELHVWLNPYRAGHPDYEGGYPENHVSKTMPDAVHKLGDSGMWWIDPSHPGAKAHTLAVIEDVLTRYDVDGLHLDDYFYPYPSYLKGFPGGQFPDEKNHAAYRKRGGELSRDDWRRDQVNTLVREISELVGRVKPDARFGISPFGLPREGSVPFIRGFDQYEKLYADVALWLREGWVDYLAPQLYWPIEKPEQSFTELLRWWHANNPKGKDVYAGLYTSRLLGDEPGYRDTEIPLQVRWSRLLTPEGLQPGHIHFSMTALQQNPRGLVEKLRPLYDEPARKD
>NC_017080.1|WP_014436663.1|1512508_1513204_+|N-acetylmuramoyl-L-alanine-amidase
MPDAPARWLLPALLLVAPAVLAEPAPAPSIVMRERWGGEEVEYPEALRHEPATVLLHHAGVAWRAGADPAASMRGLLRFSREEKGWPDVPYHFVVAPDGRIFEGRDLRYAPDTNTSFDPTGYVNVELLGNFEEQRVNATQLDAAVRVVAWLADRLEMPTADLATHAGVAPGQTSCPGADFLRYLDGGSFHAAVDAARAGEPVEIEVLPPLPDGPQAFAEAEEPAVPKRSAN
>NC_017080.1|WP_041377992.1|1513279_1514074_-|hypothetical-protein
MSLFRFAFCVATPAALAAAPATAAPVVIEDFAEFNPTTQVVDPSFGIFRSGVGPAGSGSNGGAVSGTTAISSTPWDFTPGGGTSYVNNLSITDDNLFGGGLNYGVPTAWTLRHIANGGAPSAANLVSAAGGVGSVGFYLQTTSPDLSVRIALDETGGSGGTEGSVAQDVIADGEYHLYQWSLADAAQWNPLFGASNGELDGTTYTIDSIVFYDLGAEDGSTSDFNLAYVVADNTGPLVNVVPEPVGLLALGLAGFGLLGRRRAG
>NC_017080.1|WP_014436666.1|1514321_1515152_+|DUF1559-domain-containing-protein
MKPATPLRSAPMGFTLIELLVVISIIALLIGILLPALGAARSSARDMQCLSNTRQVAIAATAYATDNKDYSVRATSNGAFTADNITEYWSGKLVIGEYGATVEMYQCPVFEPDPSFTFDPYDGSALGAMLANPGHINWRMIDYGTNWYTVSGRRSYARPGETGQQAAARSIQTYNLADASNTIFVADSWYEAFAGAANQRGIYVIGGIPTNGGGVHARHGNQTINIGYMDGHASAFGVEDIRFNQPGGPWDPDNLGALYIPATSAATTPQNQWDEE

Crispr_ID: NC_017080_6

• CRISPR_ID: NC_017080_6
• CRISPR_location: 1500130-1500266
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_017080_6

Consensus_repeat	Method
CGACGCCCGCGTCCGCGGCGCCCGC	CRISPRCasFinder

spacers of NC_017080_6

>6.1|1500155|44|NC_017080|CRISPRCasFinder
CACCGCCGCGGCGACGCCCGCGTCCGCGGCGCCCGCCCCGGTGG
>6.2|1500224|17|NC_017080|CRISPRCasFinder
GCCGACGCCCGCGTCCG

CRISPR arrays and Neighbor proteins around NC_017080_6

CRISPR arrays

The CRISPR arrays of NC_017080_6

>merge|NC_017080|6|1500130-1500266|CRISPRCasFinder
TCGCGGCGGCCCCCGCGGCGCCCGGCACCGCCGCGGCGACGCCCGCGTCCGCGGCGCCCGCCCCGGTGGCCGTTCCCGCGCCCGCGACGCCGGAGCCGACGCCCGCGTCCGCGGCGCCCGCGACGGGCACCCCCGCG

>NC_017080|6|5|1500130-1500266|CRISPRCasFinder
TCGCGGCGGCCCCCGCGGCGCCCGG	CACCGCCGCGGCGACGCCCGCGTCCGCGGCGCCCGCCCCGGTGG
CCGTTCCCGCGCCCGCGACGCCGGA	GCCGACGCCCGCGTCCG
CGGCGCCCGCGACGGGCACCCCCGCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_017080.1|WP_014436663.1|1512508_1513204_+|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl|CDD|133475
NC_017080.1|WP_014436642.1|1487158_1488544_+|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl|CDD|237001
NC_017080.1|WP_014436656.1|1504701_1505229_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|225695
NC_017080.1|WP_014436651.1|1497416_1499033_+|sigma-54-interacting-transcriptional-regulator	unknown	unknown	gnl|CDD|273817
NC_017080.1|WP_053230088.1|1511219_1512506_+|family-10-glycosylhydrolase	unknown	unknown	gnl|CDD|224563
NC_017080.1|WP_014436666.1|1514321_1515152_+|DUF1559-domain-containing-protein	unknown	unknown	gnl|CDD|225076
NC_017080.1|WP_014436653.1|1500995_1502075_-|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl|CDD|349906
NC_017080.1|WP_041377991.1|1502479_1504648_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436646.1|1491628_1492612_+|aldo/keto-reductase	unknown	unknown	gnl|CDD|381312
NC_017080.1|WP_014436645.1|1489963_1491148_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436657.1|1505300_1506323_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_017080.1|WP_014436649.1|1496289_1496688_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436659.1|1508560_1510408_-|heparinase-II/III-family-protein	unknown	unknown	gnl|CDD|377945
NC_017080.1|WP_014436648.1|1493413_1496035_-|hypothetical-protein	unknown	unknown	gnl|CDD|236624
NC_017080.1|WP_154661783.1|1496794_1497241_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436658.1|1506523_1508452_+|glucosamine-6-phosphate-deaminase	unknown	unknown	gnl|CDD|235005
NC_017080.1|WP_041377992.1|1513279_1514074_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436644.1|1489393_1489882_+|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl|CDD|376377
NC_017080.1|WP_014436643.1|1488600_1489197_-|DUF421-domain-containing-protein	unknown	unknown	gnl|CDD|225205
NC_017080.1|WP_053230086.1|1492608_1493394_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl|CDD|133009

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_017080.1|WP_014436666.1|1514321_1515152_+|DUF1559-domain-containing-protein	gnl|CDD|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	2.77267e-08
NC_017080.1|WP_014436642.1|1487158_1488544_+|2-oxo-acid-dehydrogenase-subunit-E2	gnl|CDD|237001	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.	1.04416e-149
NC_017080.1|WP_014436656.1|1504701_1505229_-|GNAT-family-N-acetyltransferase	gnl|CDD|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	1.23229e-09
NC_017080.1|WP_014436663.1|1512508_1513204_+|N-acetylmuramoyl-L-alanine-amidase	gnl|CDD|133475	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of the conserved histidines and a cysteine are zinc binding residues. Site-directed mutagenesis of T7 lysozyme indicates that two conserved residues, a Tyr and a Lys, are important for amidase activity.	4.48417e-19
NC_017080.1|WP_053230088.1|1511219_1512506_+|family-10-glycosylhydrolase	gnl|CDD|224563	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown].	1.21944e-70
NC_017080.1|WP_014436653.1|1500995_1502075_-|M20/M25/M40-family-metallo-hydrolase	gnl|CDD|349906	cd05656, M42_Frv, M42 Peptidase, endoglucanases. Peptidase M42 family, Frv (Frv Operon Protein; Endo-1 4-Beta-Glucanase; Cellulase Protein; Endoglucanase; Endo-1 4-Beta-Glucanase Homolog; Glucanase; EC. 3.2.1.4) subfamily. Frv is a co-catalytic metallopeptidase, found in archaea and bacteria, including Pyrococcus horikoshii tetrahedral shaped phTET1 (DAPPh1; FrvX; PhDAP aminopeptidase; PhTET aminopeptidase; deblocking aminopeptidase), phTET2 (DAPPh2) and phTET3 (DAPPh3), Haloarcula marismortui TET (HmTET) as well as Bacillus subtilis YsdC. All of these exhibit aminopeptidase and deblocking activities. The HmTET is a broad substrate aminopeptidase capable of degrading large peptides. PhTET2, which shares 24% identity with HmTET, is a cobalt-activated peptidase and possibly a deblocking aminopeptidase, assembled as a 12-subunit tetrahedral dodecamer, while PhTET1 can be alternatively assembled as a tetrahedral dodecamer or as an octahedral tetracosameric structure. The active site in such a self-compartmentalized complex is located on the inside such that substrate sizes are limited, indicating function as possible peptide scavengers. PhTET2 cleaves polypeptides by a nonprocessive mechanism, preferring N-terminal hydrophobic or uncharged polar amino acids. Streptococcus pneumoniae PepA (SpPepA) also forms dodecamer with tetrahedral architecture, and exhibits selective substrate specificity to acidic amino acids with the preference to glutamic acid, with the substrate binding S1 pocket containing an Arg allows electrostatic interactions with the N-terminal acidic residue in the substrate. The YsdC gene is conserved in a number of thermophiles, archaea and pathogenic bacterial species; the closest structural homolog is Thermotoga maritima FrwX (34% identity), which is annotated as either a cellulase or an endoglucanase, and is possibly involved in polysaccharide biosynthesis or degradation.	1.48583e-113
NC_017080.1|WP_014436651.1|1497416_1499033_+|sigma-54-interacting-transcriptional-regulator	gnl|CDD|273817	TIGR01817, Nif-specific_regulatory_protein, Nif-specific regulatory protein. This model represents NifA, a DNA-binding regulatory protein for nitrogen fixation. The model produces scores between the trusted and noise cutoffs for a well-described NifA homolog in Aquifex aeolicus (which lacks nitrogenase), for transcriptional activators of alternative nitrogenases (VFe or FeFe instead of MoFe), and truncated forms. [Central intermediary metabolism, Nitrogen fixation, Regulatory functions, DNA interactions].	4.20753e-155
NC_017080.1|WP_014436658.1|1506523_1508452_+|glucosamine-6-phosphate-deaminase	gnl|CDD|235005	PRK02122, PRK02122, glucosamine-6-phosphate deaminase-like protein; Validated.	0
NC_017080.1|WP_014436657.1|1505300_1506323_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	5.8899e-47
NC_017080.1|WP_014436659.1|1508560_1510408_-|heparinase-II/III-family-protein	gnl|CDD|377945	pfam07940, Hepar_II_III, Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.	2.30886e-07
NC_017080.1|WP_014436648.1|1493413_1496035_-|hypothetical-protein	gnl|CDD|236624	PRK09782, PRK09782, bacteriophage N4 receptor, outer membrane subunit; Provisional.	0.00498541
NC_017080.1|WP_014436646.1|1491628_1492612_+|aldo/keto-reductase	gnl|CDD|381312	cd19086, AKR_AKR11C1, AKR11C family of aldo-keto reductase (AKR). Bacillus subtilis uncharacterized oxidoreductase YqkF is a founding member of aldo-keto reductase family 11 member C1 (AKR11C1). It may function as oxidoreductase. This family also includes Bacillus halodurans AKR11C1, an NADPH-dependent 4-hydroxy-2,3-trans-nonenal reductase.	2.76287e-86
NC_017080.1|WP_014436644.1|1489393_1489882_+|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl|CDD|376377	pfam00731, AIRC, AIR carboxylase. Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.	2.51932e-82
NC_017080.1|WP_014436643.1|1488600_1489197_-|DUF421-domain-containing-protein	gnl|CDD|225205	COG2323, COG2323, Predicted membrane protein [Function unknown].	1.69329e-28
NC_017080.1|WP_053230086.1|1492608_1493394_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl|CDD|133009	cd02516, CDP-ME_synthetase, CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.	6.5643e-57

Protein sequences

>NC_017080.1|WP_014436651.1|1497416_1499033_+|sigma-54-interacting-transcriptional-regulator
MARAERELDIIEGISQILGENLLLEQVFQRAMLLLSENLGVQRAALVLLDPLSGQLRTFASVGLTPTEQERGRYAVGEGITGRVMKSGEPAVLADVTKDPDFLNRTGARSLGEDDGPMGEAPASAVSFICVPVRDGDLTVGTISIDKPLESEEQLAADARLLRIVAGMFSQVIRIHDQVRLERDQWQQEEKRLRDNLRSRYKFDNIIGSSPAMLDVLGTIGQVADSRATVLLLGETGCGKELIAKAIHYNSPRESGPLIRVNCGALSPQLLESELFGHVKGAFTGAVRDKIGRFEAADKGTLFLDEVGTLEPQLQVKLLRVLQEREVERVGDHRSRKVDVRVIAATNLNLEAEVERGSFREDLYYRLNVVTVNLPPLRTRREDIPALVEHFLERYNKENGRDLSRVSRETLSTFLRYPWPGNVRELENMIERAVVLSTSNELTPELLPLAIRMFAAQTRGDGADASIDGLSERLAEAAVRQYAASDGRVYELVIQQIERHLLKHALRHNGGVKIRTADFLGINRNTLNKKVKELSLEG
>NC_017080.1|WP_154661783.1|1496794_1497241_-|hypothetical-protein
MPSDPDRLFSTAPVSARIYPATRFVREGERSWLTLGVELLDGLGDPVKEVGVLRCRLLADPDVSTRPGPRGVLVPAPSPQGEALYAWDVRVATPEEQAEHWDPVSRCYVLELELDDFSVAYRPSRVRVDFEPAQGVPLAAEAAMTSLP
>NC_017080.1|WP_014436649.1|1496289_1496688_-|hypothetical-protein
MSHPTSNVKSPGVEPVSESFGPAQVHAVVCGILRFDKRYARLADRIADAVSQRWSGLKRPPRGQFPREWVASTLCWWLRECHRRPGSRAGGSGSGFSRPLSGPIAGMLRPYRLGGGVGPGCVLTAALHRRAA
>NC_017080.1|WP_014436648.1|1493413_1496035_-|hypothetical-protein
MPRVPPRSVLVLLLGLAWCCWRVPAAGVEADPGAAPLALPPAPAALERLMEAEADGPRAARRRIAHGRWPGLDPATLPAEEAAALLRAAGVRPDAWPAAVRSDAGNRVPAAAAWREHGRPLAALAHLGEEDPAERPPAERLLRAGCLFEVGRHGDAAGVLAALLDDPPQDPRIHAEALLLADRLGVAGPRATRRASALLDEATERAPLEAGPRRVQAQLLFDRDNRGGGGSALEAALARDPLDAASLRLLGEVALDGFDFDRVNAVVARLRGLTQRLGGGAPGAGRGHPFADALEARALLRADDPAGALAVIAAAGGERIDLLPLRAAAEAILDPASPAAAAALAACESAAPGGAAAYAVLGEVLSEARRYPASVAALREAIRRLPSDPGPHHTLGMTLAQQGDLPAAVAALRESVRLDPFQSDAANSLDLFERMLAWPVIETAHFRIRHAPGPDAVLAADMGRALEPMRADVTGFFDHEPARPTQIDLLPDAPSFAVRITGRPEIWTIAACTGDVIAMTPPRLGPEQAGAFHWLNVLRHEYAHTVTLDRTGNRIAHWLTEAAAVNAESVGRPYDQAKLLAAALRADALFAYEDLNWGFIRPEKPTDRPLAYAQSAWMLEHLMEVDGRPAMLRMLDAAARGAGDAEALRASTGLGPEAFLARFRPWAEAAVARWGLDKAPPEGEAAAAIGAARSAADPAAAAAARGALAALPAAEARHPDVLEAVARLEAAFGNPAAAEAAVERYALARPVDPWPQTALADLALAAGNADLAAAHLSVLERSDGMTARSARLLMELYSRDDRPAAALAAAQAALLRQPYDAGLREDAAALALRAGEPAEALFQVEQLVRLEPDEPLHRRRLEAVRNRVETSGG
>NC_017080.1|WP_053230086.1|1492608_1493394_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MSLRVAVILAAAGSGSRFGGPATPTGPTKVEEDLGGRPVFAWSLALLRARAGVVSVVLAVDPRRRDAFAARWPAELADAAGLAPVRVVAGGADRDATVRLALAAVPEDATHAAVHDAARPGIDDALLDRLFAAAAAGHDAVFPGVPVADTLRRVQAAGGGVARAGETVDRESLVAVQTPQLFAIGVLRRAHAATLPGPPTDDAGRVAALGVPVVCVPGDPRNVKLTTRADLATLEARVADAPSASGPPGGPAREPGPAGRA
>NC_017080.1|WP_014436646.1|1491628_1492612_+|aldo/keto-reductase
MRTRSLYTGGPAVPDVGLGCWQIGGGWAGDWDAAAAAGVLAAAYDAGVRFFDTADVYGGGASEEAVGRFVAGRDGCVVATKLGRAAGIFPGGYTEAALRSATEASLDRLGVERLDLTQLHCVPTGVLRRGEVFAWLRKQRDDGLIAAFGASVESVEEGMICLQDGGVSTLQVIFNAFRQDPLDELLATAAAAGVGVIVRLPLASGLLTGKLKQDTAFGAGDHRGFNRDGAAFNVGETFGGIPYERGVELSERFVEITRDAAGTPAQRALRWVLDHHAVSVAIPGASRPAQARGNAAASEMPELGGAVHGRLAALWRDEVAPHVRGPR
>NC_017080.1|WP_014436645.1|1489963_1491148_+|hypothetical-protein
MNAPRRRRLPAALLLAGLLPATAEASMSTGDTPALDVRLLDGTSLPSNVFAGHPVVVTFWAAGHPASVAALESLAALPPEAAGAAAFLGVALDADLALATDAAERVAGGDAWEHAFNGRQAEPVDTRFYDAPYGIPAVWLLDGDGRVTWTGHPDDLEPALAEAVTAAGDTPAWGPGVRAARIAWAGVLEAAGSRPEDLLDGAERLSELGELDAATAGPDAAANAAGVVAALAGQPGVERSRLKLAGDADPSGARALIRLRELAGDAAEADAAARRTRVDTLEAARRAEDRNDDAAAMASYAALVEEGPADAPEVIAAAERLEVFRAKGMTADAARAEADAAEAARRLLLARNYAENFREENAVEELEELLERFPESPSAAEAAELKAELEAMLR
>NC_017080.1|WP_014436644.1|1489393_1489882_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSQSCVVGVVMGSRSDWPTMEAAAAVLDRFGVPHEARVISAHRTPERMNRYAADAAGRGLRAIIAGAGGAAHLPGMLAAQTAVPVLGVPVQSRALQGLDSLLSIAQMPGGVPVATFAIGEAGAKNAGLFAVALLATTDAELAEKLAAFRREQAEAVGDDPRG
>NC_017080.1|WP_014436643.1|1488600_1489197_-|DUF421-domain-containing-protein
MHALARQPPPDASSWWLSDLPTLLAAAATTAVVYAAVILFCRIQGVRSFAKMSSFDFAMTIAVGSVIASTALAGTTSLLLGLVVLATLFASQAVVAVTRTRSKAAEDLIDNEPILVFRHGRMLPEGMAAARLTEDDLYAKLREANALQPSEVQAVVVESTGDVSVLHGDQPLDPSLLKGLVNHDAEGPRTAVDPPGKD
>NC_017080.1|WP_014436642.1|1487158_1488544_+|2-oxo-acid-dehydrogenase-subunit-E2
MPIQIEMPRLSDTMEEGTLVKWRVAVGDKVNAQDVIADVETDKATMEVPVFDEGTIARLAVDEGATVPVGEVMCVIAEAGEDVEAAAAAGGGEKKEAAAQPKESTEQRAEETSADGGADSIASSQDNAGPAASSSGSGGGRVKISPLARKLADEHGVDVNAIEGSGPGGRIIKRDVLEAAKGGGGGVSASAGKSEREAEPASTPAPKPVEAPSGVASHGVGPGLEAKTVQLSGMRKTIARRLVESKTGVPHFQVSVAVAMDELMSLRATINGQLKEQGVKISVNDFVMKAIAMSCVQHPVVNASFGGDEIVYHGSVNVGVAIALPISADGTGGGLLVATVRGVESKGLRAISNEVKTLAGKARSGGLSPQEMADSTIAISNLGMPQYGVTSFSAIVNPPNAAIIAVGAALEKAVVRDGQLAVGLEMSVTLSGDHRVIDGAVAGEYLATLRSMLENPASLLV
>NC_017080.1|WP_014436653.1|1500995_1502075_-|M20/M25/M40-family-metallo-hydrolase
MNLDLLKRLSETAAVPGREHRVRALLEEEAAGLFDTVTTDPLGSLVCVRSARGPAAEPPQRVMVAAHMDQIGFLVRFIDDDGFLRVQPVGGFDIRNLFARVVTICPDPADPSRDLRGLMNPGVKPVHLATEEDRKKLPDLTDLVIDTTLPAEEVKKRVKIGDMVVLDQPFVDLGPAVAGQAMDNRVACWALVEAVRKLEADATPHPCELHCVFTVQEEVGLRGALTSAYTARPHVGIAVDTTLCVDTPGGVPHQQTTAFGKGVALTVMDSASIADVGILQAFERLGEANGVPTQRSILMRGGTDAGSLQRAGVGARTFTLSVPTRNIHSVTEACHKADLEACRDLLALFLAEAVPSAPG
>NC_017080.1|WP_041377991.1|1502479_1504648_+|hypothetical-protein
MTRRRTAATGAFAAATGLLLLAAGAGGTPSGAAGVGAAVGWLGVLEAVLRSSGLLAGFWLSAWGLGGLLGPRVGTGQRLAVGAAALLLAGWLAAWLLGVSRGVAVGVAAPGWLLLIREARRRPVRRVRVARRPGSLAPLLLAPGLALLLLAACLPPGAVWGVEAFGYDALSYHLQIPREWLAAGRMAFLPHNVYASLPGLMEAAYALAMAALGVDPAAGPLAADRAALAAVPCQLLHAGFAVVAALCIREATDRRGVAGWAAGGAFLALPWVVVTGSSAYNEAAAIALGAAALGLVAADGGPRGPVPPAVRGALIGLLLGAACLAKPTAGFMLALPLGGWMLGRALLDPRNRVGSPCVPGLIARRRRSAALRSVAVATAVGSAVLSPWLLRNALWTGNPVHPFATSTLGLGHWTPELAARWAEAHARPAGAGLGVLWRQWLGNLGFAAVGGTPVAASVTDVARFGREGGFPILWLLAALGAGFAFSRRRTRGLAAGLVGLLAFQLAAWWLLTHHQSRFLVFTALPGAVAVGLLVARPARSCRRGPGVALAGLLAVLAVAVPAAAGFAVLWGQTRAFLDPATGRPVRAAPWELVGALAAPGVEGLDTHPLDALPPGSRVLVVADNGGLFYADTPIVYASAFDENPLAPLMDRAAGDPALLAADLRAAGITHVWIGWSELARLGATYGVDPRLDPAALGRITGGWPGERTPTRALLRVPPATTR
>NC_017080.1|WP_014436656.1|1504701_1505229_-|GNAT-family-N-acetyltransferase
MNVERHEELRLAPALDREIAELIGRVFPTDFGGRSFFQNRHHARFLVRVGGTLAGHLAVCHRAVRLGYRVLDVLGIAEVAVDPAFRRRGIGVALVEAALREGRAAGVDAVLLFGVESIYARAGFVAVKNPITRIDMRGVRTGEIVREEAEHLMVHPLGESGWDATAPLDLAGFTF
>NC_017080.1|WP_014436657.1|1505300_1506323_+|Gfo/Idh/MocA-family-oxidoreductase
MVNVGVIGLGSMGNTHLAAYGSVPGCRVVAVADADEGRRTGRTGAGGNIEGQGSGGGFDFASVRAYADASELIADPEVHLVDVCLPTPLHARFAVAALRAGKHLMVEKPLARTAAEADTIVAAAEEASAGGQIAMCGMCMRFWPGWVWLKEAIDDGRFGRVLHARFRRVTSHPPGSFYADGDACGGALLDLHVHDTDFVRHAFGAPEAVFSRGYAKHTSRPDHVCTQYLFGDGGPVVTAEGGWAMHEGFGFEMQYAVNFERATAVFDIHQDPVLTLIDGEGKRAVDIPGGMGYQPELAYLIGCVERGEAPSTVTLADAANALRIVEAEGRSIASGRIEAL
>NC_017080.1|WP_014436658.1|1506523_1508452_+|glucosamine-6-phosphate-deaminase
MSTTTHPVAATERIPVEIHPSSAEASAAVAAEIAQLIRTKRAAGGNAVLGLATGSTPTGVYDELIRLHREEGLSFKGVKTFNLDEYVPMAPDALQSYRRFMDEHLFDHVDFDEGDTHVPDGLLPVEDTAAGCARYEEQIQEAGGLDLQLLGIGRTGHIGFNEPGSGKDSRTRLIWLDRLTRADAASDFFGAENVPRRAITMGVGTIMEAKRIVLMAWGEGKAPVVAAAVEGPETPAVAASYLQTHPNATFVLDEAASAGLTRTRCPWLVGSVDWTPRRQRSAAVWLAQRAGKPLLKLTDEDYNESGLQELVAEHGPAYDVNLRVFRELQRTITGWPGGKPSERRRAGDVQREGDDVFPKRILIFSPHPDDDVISMGGTLIRLVDQGHEVHVAYQVSGNIAVFDADAVRFADFYSELAGTRGSSQEGVLKEVVDEVDAKEPGAVDGELLKSIKQIIRRGECRAAARLCGLPTDRLHFLDLPFYETGKVRKKPLSREDVDLTAALLERIKPHQVYAAGDLSDPHGTHRVCLAAVMQACERLKDEDWFEQTAVWLYRGAWQEWLPEQVDMAVPLSPAELLKKRQAIFKHESQKDRAPYPGTDEREFWERAEERNRNTARLYDRLGLAEYEAIEAFVQWSPGQEIG
>NC_017080.1|WP_014436659.1|1508560_1510408_-|heparinase-II/III-family-protein
MPTSADPAAPGPPPPSPPLASMPEVRAGHPRVIATPERLAALRAQRAGDAVLDALLRNVEARARACLDQPTLQREQVGRRLLRVSREALERITACALAFHTTGDGRFARRAEEELLAVAGFTDWNPTHFLDTAEMAAAVGLGYDWLFDTLSDDTRVALRGALQTKALRQRTASRHGWHWQLATHNWNPVGFGGLTLAALAIAEDDPAALAELLAAVREHNPRALQAMAPDGVHPEGPAYWSYGTTYQCLLLDALRTALGTDLGLAQEPGFLASGGFMAHARGPTGRSFNFSDSRERVSFTPAFLWVAEEANAPGWLAAWRAGGWEEATAADGRFRVFTPLWWLRLDPTALGEDAPRSWSGGGPNPVAFFRERWSDPGAMYLAIKGGRGSVSHGHLDAGSFVLDADGVRWAMDPGKVDYESIESQGIDLWDRAQGSDRWRVYHHRNEAHNTLTIGGALHRVDGFAPLIAVEPLAPPGENLPGVAALDLAAPLGASVATATRRFVFDPGPDRGVTVTDELTGLAPAAREEPVAWTLMTEAAVEVDGDSATLRRDGKMLRVEMTSSRAGRWHAEPAAPPAGLLGPPLPGVTRLRWTTSAAPDGTLRLEATLRPLDPLR
>NC_017080.1|WP_053230088.1|1511219_1512506_+|family-10-glycosylhydrolase
MQDLPLCGFLLACLTLGIGSAAAAPAGSSADNPALAVRSAETRQDRGTEAPEEFRAAWVATVANIDWPSKPGLATRRQKEELLDLLDDAQEIGLNALIFQIRPHADALYPSELEPWSPYLSGTMGEAPRPAWDPLALAIEEAHARGIELHVWLNPYRAGHPDYEGGYPENHVSKTMPDAVHKLGDSGMWWIDPSHPGAKAHTLAVIEDVLTRYDVDGLHLDDYFYPYPSYLKGFPGGQFPDEKNHAAYRKRGGELSRDDWRRDQVNTLVREISELVGRVKPDARFGISPFGLPREGSVPFIRGFDQYEKLYADVALWLREGWVDYLAPQLYWPIEKPEQSFTELLRWWHANNPKGKDVYAGLYTSRLLGDEPGYRDTEIPLQVRWSRLLTPEGLQPGHIHFSMTALQQNPRGLVEKLRPLYDEPARKD
>NC_017080.1|WP_014436663.1|1512508_1513204_+|N-acetylmuramoyl-L-alanine-amidase
MPDAPARWLLPALLLVAPAVLAEPAPAPSIVMRERWGGEEVEYPEALRHEPATVLLHHAGVAWRAGADPAASMRGLLRFSREEKGWPDVPYHFVVAPDGRIFEGRDLRYAPDTNTSFDPTGYVNVELLGNFEEQRVNATQLDAAVRVVAWLADRLEMPTADLATHAGVAPGQTSCPGADFLRYLDGGSFHAAVDAARAGEPVEIEVLPPLPDGPQAFAEAEEPAVPKRSAN
>NC_017080.1|WP_041377992.1|1513279_1514074_-|hypothetical-protein
MSLFRFAFCVATPAALAAAPATAAPVVIEDFAEFNPTTQVVDPSFGIFRSGVGPAGSGSNGGAVSGTTAISSTPWDFTPGGGTSYVNNLSITDDNLFGGGLNYGVPTAWTLRHIANGGAPSAANLVSAAGGVGSVGFYLQTTSPDLSVRIALDETGGSGGTEGSVAQDVIADGEYHLYQWSLADAAQWNPLFGASNGELDGTTYTIDSIVFYDLGAEDGSTSDFNLAYVVADNTGPLVNVVPEPVGLLALGLAGFGLLGRRRAG
>NC_017080.1|WP_014436666.1|1514321_1515152_+|DUF1559-domain-containing-protein
MKPATPLRSAPMGFTLIELLVVISIIALLIGILLPALGAARSSARDMQCLSNTRQVAIAATAYATDNKDYSVRATSNGAFTADNITEYWSGKLVIGEYGATVEMYQCPVFEPDPSFTFDPYDGSALGAMLANPGHINWRMIDYGTNWYTVSGRRSYARPGETGQQAAARSIQTYNLADASNTIFVADSWYEAFAGAANQRGIYVIGGIPTNGGGVHARHGNQTINIGYMDGHASAFGVEDIRFNQPGGPWDPDNLGALYIPATSAATTPQNQWDEE

Crispr_ID: NC_017080_7

• CRISPR_ID: NC_017080_7
• CRISPR_location: 1500500-1500578
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_017080_7

Consensus_repeat	Method
CGACGCCCGCGTCCGCGGCGCCCGC	CRISPRCasFinder

spacers of NC_017080_7

>7.1|1500525|29|NC_017080|CRISPRCasFinder
GGCTCCACCGCGCTGCGGGTGTCGCGTGC

CRISPR arrays and Neighbor proteins around NC_017080_7

CRISPR arrays

The CRISPR arrays of NC_017080_7

>merge|NC_017080|7|1500500-1500578|CRISPRCasFinder
CGCCGCCCGCGCCCTCGGCATCGACGGCTCCACCGCGCTGCGGGTGTCGCGTGCCGGCTACCGCTTCAGCGTCGCCGAC

>NC_017080|7|6|1500500-1500578|CRISPRCasFinder
CGCCGCCCGCGCCCTCGGCATCGAC	GGCTCCACCGCGCTGCGGGTGTCGCGTGC
CGGCTACCGCTTCAGCGTCGCCGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_017080.1|WP_014436663.1|1512508_1513204_+|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl|CDD|133475
NC_017080.1|WP_014436642.1|1487158_1488544_+|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl|CDD|237001
NC_017080.1|WP_014436656.1|1504701_1505229_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|225695
NC_017080.1|WP_014436651.1|1497416_1499033_+|sigma-54-interacting-transcriptional-regulator	unknown	unknown	gnl|CDD|273817
NC_017080.1|WP_053230088.1|1511219_1512506_+|family-10-glycosylhydrolase	unknown	unknown	gnl|CDD|224563
NC_017080.1|WP_014436666.1|1514321_1515152_+|DUF1559-domain-containing-protein	unknown	unknown	gnl|CDD|225076
NC_017080.1|WP_014436653.1|1500995_1502075_-|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl|CDD|349906
NC_017080.1|WP_041377991.1|1502479_1504648_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436646.1|1491628_1492612_+|aldo/keto-reductase	unknown	unknown	gnl|CDD|381312
NC_017080.1|WP_014436645.1|1489963_1491148_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436657.1|1505300_1506323_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_017080.1|WP_014436649.1|1496289_1496688_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436659.1|1508560_1510408_-|heparinase-II/III-family-protein	unknown	unknown	gnl|CDD|377945
NC_017080.1|WP_014436648.1|1493413_1496035_-|hypothetical-protein	unknown	unknown	gnl|CDD|236624
NC_017080.1|WP_154661783.1|1496794_1497241_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436658.1|1506523_1508452_+|glucosamine-6-phosphate-deaminase	unknown	unknown	gnl|CDD|235005
NC_017080.1|WP_041377992.1|1513279_1514074_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436644.1|1489393_1489882_+|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl|CDD|376377
NC_017080.1|WP_014436643.1|1488600_1489197_-|DUF421-domain-containing-protein	unknown	unknown	gnl|CDD|225205
NC_017080.1|WP_053230086.1|1492608_1493394_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl|CDD|133009

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_017080.1|WP_014436666.1|1514321_1515152_+|DUF1559-domain-containing-protein	gnl|CDD|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	2.77267e-08
NC_017080.1|WP_014436642.1|1487158_1488544_+|2-oxo-acid-dehydrogenase-subunit-E2	gnl|CDD|237001	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.	1.04416e-149
NC_017080.1|WP_014436656.1|1504701_1505229_-|GNAT-family-N-acetyltransferase	gnl|CDD|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	1.23229e-09
NC_017080.1|WP_014436663.1|1512508_1513204_+|N-acetylmuramoyl-L-alanine-amidase	gnl|CDD|133475	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of the conserved histidines and a cysteine are zinc binding residues. Site-directed mutagenesis of T7 lysozyme indicates that two conserved residues, a Tyr and a Lys, are important for amidase activity.	4.48417e-19
NC_017080.1|WP_053230088.1|1511219_1512506_+|family-10-glycosylhydrolase	gnl|CDD|224563	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown].	1.21944e-70
NC_017080.1|WP_014436653.1|1500995_1502075_-|M20/M25/M40-family-metallo-hydrolase	gnl|CDD|349906	cd05656, M42_Frv, M42 Peptidase, endoglucanases. Peptidase M42 family, Frv (Frv Operon Protein; Endo-1 4-Beta-Glucanase; Cellulase Protein; Endoglucanase; Endo-1 4-Beta-Glucanase Homolog; Glucanase; EC. 3.2.1.4) subfamily. Frv is a co-catalytic metallopeptidase, found in archaea and bacteria, including Pyrococcus horikoshii tetrahedral shaped phTET1 (DAPPh1; FrvX; PhDAP aminopeptidase; PhTET aminopeptidase; deblocking aminopeptidase), phTET2 (DAPPh2) and phTET3 (DAPPh3), Haloarcula marismortui TET (HmTET) as well as Bacillus subtilis YsdC. All of these exhibit aminopeptidase and deblocking activities. The HmTET is a broad substrate aminopeptidase capable of degrading large peptides. PhTET2, which shares 24% identity with HmTET, is a cobalt-activated peptidase and possibly a deblocking aminopeptidase, assembled as a 12-subunit tetrahedral dodecamer, while PhTET1 can be alternatively assembled as a tetrahedral dodecamer or as an octahedral tetracosameric structure. The active site in such a self-compartmentalized complex is located on the inside such that substrate sizes are limited, indicating function as possible peptide scavengers. PhTET2 cleaves polypeptides by a nonprocessive mechanism, preferring N-terminal hydrophobic or uncharged polar amino acids. Streptococcus pneumoniae PepA (SpPepA) also forms dodecamer with tetrahedral architecture, and exhibits selective substrate specificity to acidic amino acids with the preference to glutamic acid, with the substrate binding S1 pocket containing an Arg allows electrostatic interactions with the N-terminal acidic residue in the substrate. The YsdC gene is conserved in a number of thermophiles, archaea and pathogenic bacterial species; the closest structural homolog is Thermotoga maritima FrwX (34% identity), which is annotated as either a cellulase or an endoglucanase, and is possibly involved in polysaccharide biosynthesis or degradation.	1.48583e-113
NC_017080.1|WP_014436651.1|1497416_1499033_+|sigma-54-interacting-transcriptional-regulator	gnl|CDD|273817	TIGR01817, Nif-specific_regulatory_protein, Nif-specific regulatory protein. This model represents NifA, a DNA-binding regulatory protein for nitrogen fixation. The model produces scores between the trusted and noise cutoffs for a well-described NifA homolog in Aquifex aeolicus (which lacks nitrogenase), for transcriptional activators of alternative nitrogenases (VFe or FeFe instead of MoFe), and truncated forms. [Central intermediary metabolism, Nitrogen fixation, Regulatory functions, DNA interactions].	4.20753e-155
NC_017080.1|WP_014436658.1|1506523_1508452_+|glucosamine-6-phosphate-deaminase	gnl|CDD|235005	PRK02122, PRK02122, glucosamine-6-phosphate deaminase-like protein; Validated.	0
NC_017080.1|WP_014436657.1|1505300_1506323_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	5.8899e-47
NC_017080.1|WP_014436659.1|1508560_1510408_-|heparinase-II/III-family-protein	gnl|CDD|377945	pfam07940, Hepar_II_III, Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.	2.30886e-07
NC_017080.1|WP_014436648.1|1493413_1496035_-|hypothetical-protein	gnl|CDD|236624	PRK09782, PRK09782, bacteriophage N4 receptor, outer membrane subunit; Provisional.	0.00498541
NC_017080.1|WP_014436646.1|1491628_1492612_+|aldo/keto-reductase	gnl|CDD|381312	cd19086, AKR_AKR11C1, AKR11C family of aldo-keto reductase (AKR). Bacillus subtilis uncharacterized oxidoreductase YqkF is a founding member of aldo-keto reductase family 11 member C1 (AKR11C1). It may function as oxidoreductase. This family also includes Bacillus halodurans AKR11C1, an NADPH-dependent 4-hydroxy-2,3-trans-nonenal reductase.	2.76287e-86
NC_017080.1|WP_014436644.1|1489393_1489882_+|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl|CDD|376377	pfam00731, AIRC, AIR carboxylase. Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.	2.51932e-82
NC_017080.1|WP_014436643.1|1488600_1489197_-|DUF421-domain-containing-protein	gnl|CDD|225205	COG2323, COG2323, Predicted membrane protein [Function unknown].	1.69329e-28
NC_017080.1|WP_053230086.1|1492608_1493394_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl|CDD|133009	cd02516, CDP-ME_synthetase, CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.	6.5643e-57

Protein sequences

>NC_017080.1|WP_014436651.1|1497416_1499033_+|sigma-54-interacting-transcriptional-regulator
MARAERELDIIEGISQILGENLLLEQVFQRAMLLLSENLGVQRAALVLLDPLSGQLRTFASVGLTPTEQERGRYAVGEGITGRVMKSGEPAVLADVTKDPDFLNRTGARSLGEDDGPMGEAPASAVSFICVPVRDGDLTVGTISIDKPLESEEQLAADARLLRIVAGMFSQVIRIHDQVRLERDQWQQEEKRLRDNLRSRYKFDNIIGSSPAMLDVLGTIGQVADSRATVLLLGETGCGKELIAKAIHYNSPRESGPLIRVNCGALSPQLLESELFGHVKGAFTGAVRDKIGRFEAADKGTLFLDEVGTLEPQLQVKLLRVLQEREVERVGDHRSRKVDVRVIAATNLNLEAEVERGSFREDLYYRLNVVTVNLPPLRTRREDIPALVEHFLERYNKENGRDLSRVSRETLSTFLRYPWPGNVRELENMIERAVVLSTSNELTPELLPLAIRMFAAQTRGDGADASIDGLSERLAEAAVRQYAASDGRVYELVIQQIERHLLKHALRHNGGVKIRTADFLGINRNTLNKKVKELSLEG
>NC_017080.1|WP_154661783.1|1496794_1497241_-|hypothetical-protein
MPSDPDRLFSTAPVSARIYPATRFVREGERSWLTLGVELLDGLGDPVKEVGVLRCRLLADPDVSTRPGPRGVLVPAPSPQGEALYAWDVRVATPEEQAEHWDPVSRCYVLELELDDFSVAYRPSRVRVDFEPAQGVPLAAEAAMTSLP
>NC_017080.1|WP_014436649.1|1496289_1496688_-|hypothetical-protein
MSHPTSNVKSPGVEPVSESFGPAQVHAVVCGILRFDKRYARLADRIADAVSQRWSGLKRPPRGQFPREWVASTLCWWLRECHRRPGSRAGGSGSGFSRPLSGPIAGMLRPYRLGGGVGPGCVLTAALHRRAA
>NC_017080.1|WP_014436648.1|1493413_1496035_-|hypothetical-protein
MPRVPPRSVLVLLLGLAWCCWRVPAAGVEADPGAAPLALPPAPAALERLMEAEADGPRAARRRIAHGRWPGLDPATLPAEEAAALLRAAGVRPDAWPAAVRSDAGNRVPAAAAWREHGRPLAALAHLGEEDPAERPPAERLLRAGCLFEVGRHGDAAGVLAALLDDPPQDPRIHAEALLLADRLGVAGPRATRRASALLDEATERAPLEAGPRRVQAQLLFDRDNRGGGGSALEAALARDPLDAASLRLLGEVALDGFDFDRVNAVVARLRGLTQRLGGGAPGAGRGHPFADALEARALLRADDPAGALAVIAAAGGERIDLLPLRAAAEAILDPASPAAAAALAACESAAPGGAAAYAVLGEVLSEARRYPASVAALREAIRRLPSDPGPHHTLGMTLAQQGDLPAAVAALRESVRLDPFQSDAANSLDLFERMLAWPVIETAHFRIRHAPGPDAVLAADMGRALEPMRADVTGFFDHEPARPTQIDLLPDAPSFAVRITGRPEIWTIAACTGDVIAMTPPRLGPEQAGAFHWLNVLRHEYAHTVTLDRTGNRIAHWLTEAAAVNAESVGRPYDQAKLLAAALRADALFAYEDLNWGFIRPEKPTDRPLAYAQSAWMLEHLMEVDGRPAMLRMLDAAARGAGDAEALRASTGLGPEAFLARFRPWAEAAVARWGLDKAPPEGEAAAAIGAARSAADPAAAAAARGALAALPAAEARHPDVLEAVARLEAAFGNPAAAEAAVERYALARPVDPWPQTALADLALAAGNADLAAAHLSVLERSDGMTARSARLLMELYSRDDRPAAALAAAQAALLRQPYDAGLREDAAALALRAGEPAEALFQVEQLVRLEPDEPLHRRRLEAVRNRVETSGG
>NC_017080.1|WP_053230086.1|1492608_1493394_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MSLRVAVILAAAGSGSRFGGPATPTGPTKVEEDLGGRPVFAWSLALLRARAGVVSVVLAVDPRRRDAFAARWPAELADAAGLAPVRVVAGGADRDATVRLALAAVPEDATHAAVHDAARPGIDDALLDRLFAAAAAGHDAVFPGVPVADTLRRVQAAGGGVARAGETVDRESLVAVQTPQLFAIGVLRRAHAATLPGPPTDDAGRVAALGVPVVCVPGDPRNVKLTTRADLATLEARVADAPSASGPPGGPAREPGPAGRA
>NC_017080.1|WP_014436646.1|1491628_1492612_+|aldo/keto-reductase
MRTRSLYTGGPAVPDVGLGCWQIGGGWAGDWDAAAAAGVLAAAYDAGVRFFDTADVYGGGASEEAVGRFVAGRDGCVVATKLGRAAGIFPGGYTEAALRSATEASLDRLGVERLDLTQLHCVPTGVLRRGEVFAWLRKQRDDGLIAAFGASVESVEEGMICLQDGGVSTLQVIFNAFRQDPLDELLATAAAAGVGVIVRLPLASGLLTGKLKQDTAFGAGDHRGFNRDGAAFNVGETFGGIPYERGVELSERFVEITRDAAGTPAQRALRWVLDHHAVSVAIPGASRPAQARGNAAASEMPELGGAVHGRLAALWRDEVAPHVRGPR
>NC_017080.1|WP_014436645.1|1489963_1491148_+|hypothetical-protein
MNAPRRRRLPAALLLAGLLPATAEASMSTGDTPALDVRLLDGTSLPSNVFAGHPVVVTFWAAGHPASVAALESLAALPPEAAGAAAFLGVALDADLALATDAAERVAGGDAWEHAFNGRQAEPVDTRFYDAPYGIPAVWLLDGDGRVTWTGHPDDLEPALAEAVTAAGDTPAWGPGVRAARIAWAGVLEAAGSRPEDLLDGAERLSELGELDAATAGPDAAANAAGVVAALAGQPGVERSRLKLAGDADPSGARALIRLRELAGDAAEADAAARRTRVDTLEAARRAEDRNDDAAAMASYAALVEEGPADAPEVIAAAERLEVFRAKGMTADAARAEADAAEAARRLLLARNYAENFREENAVEELEELLERFPESPSAAEAAELKAELEAMLR
>NC_017080.1|WP_014436644.1|1489393_1489882_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSQSCVVGVVMGSRSDWPTMEAAAAVLDRFGVPHEARVISAHRTPERMNRYAADAAGRGLRAIIAGAGGAAHLPGMLAAQTAVPVLGVPVQSRALQGLDSLLSIAQMPGGVPVATFAIGEAGAKNAGLFAVALLATTDAELAEKLAAFRREQAEAVGDDPRG
>NC_017080.1|WP_014436643.1|1488600_1489197_-|DUF421-domain-containing-protein
MHALARQPPPDASSWWLSDLPTLLAAAATTAVVYAAVILFCRIQGVRSFAKMSSFDFAMTIAVGSVIASTALAGTTSLLLGLVVLATLFASQAVVAVTRTRSKAAEDLIDNEPILVFRHGRMLPEGMAAARLTEDDLYAKLREANALQPSEVQAVVVESTGDVSVLHGDQPLDPSLLKGLVNHDAEGPRTAVDPPGKD
>NC_017080.1|WP_014436642.1|1487158_1488544_+|2-oxo-acid-dehydrogenase-subunit-E2
MPIQIEMPRLSDTMEEGTLVKWRVAVGDKVNAQDVIADVETDKATMEVPVFDEGTIARLAVDEGATVPVGEVMCVIAEAGEDVEAAAAAGGGEKKEAAAQPKESTEQRAEETSADGGADSIASSQDNAGPAASSSGSGGGRVKISPLARKLADEHGVDVNAIEGSGPGGRIIKRDVLEAAKGGGGGVSASAGKSEREAEPASTPAPKPVEAPSGVASHGVGPGLEAKTVQLSGMRKTIARRLVESKTGVPHFQVSVAVAMDELMSLRATINGQLKEQGVKISVNDFVMKAIAMSCVQHPVVNASFGGDEIVYHGSVNVGVAIALPISADGTGGGLLVATVRGVESKGLRAISNEVKTLAGKARSGGLSPQEMADSTIAISNLGMPQYGVTSFSAIVNPPNAAIIAVGAALEKAVVRDGQLAVGLEMSVTLSGDHRVIDGAVAGEYLATLRSMLENPASLLV
>NC_017080.1|WP_014436653.1|1500995_1502075_-|M20/M25/M40-family-metallo-hydrolase
MNLDLLKRLSETAAVPGREHRVRALLEEEAAGLFDTVTTDPLGSLVCVRSARGPAAEPPQRVMVAAHMDQIGFLVRFIDDDGFLRVQPVGGFDIRNLFARVVTICPDPADPSRDLRGLMNPGVKPVHLATEEDRKKLPDLTDLVIDTTLPAEEVKKRVKIGDMVVLDQPFVDLGPAVAGQAMDNRVACWALVEAVRKLEADATPHPCELHCVFTVQEEVGLRGALTSAYTARPHVGIAVDTTLCVDTPGGVPHQQTTAFGKGVALTVMDSASIADVGILQAFERLGEANGVPTQRSILMRGGTDAGSLQRAGVGARTFTLSVPTRNIHSVTEACHKADLEACRDLLALFLAEAVPSAPG
>NC_017080.1|WP_041377991.1|1502479_1504648_+|hypothetical-protein
MTRRRTAATGAFAAATGLLLLAAGAGGTPSGAAGVGAAVGWLGVLEAVLRSSGLLAGFWLSAWGLGGLLGPRVGTGQRLAVGAAALLLAGWLAAWLLGVSRGVAVGVAAPGWLLLIREARRRPVRRVRVARRPGSLAPLLLAPGLALLLLAACLPPGAVWGVEAFGYDALSYHLQIPREWLAAGRMAFLPHNVYASLPGLMEAAYALAMAALGVDPAAGPLAADRAALAAVPCQLLHAGFAVVAALCIREATDRRGVAGWAAGGAFLALPWVVVTGSSAYNEAAAIALGAAALGLVAADGGPRGPVPPAVRGALIGLLLGAACLAKPTAGFMLALPLGGWMLGRALLDPRNRVGSPCVPGLIARRRRSAALRSVAVATAVGSAVLSPWLLRNALWTGNPVHPFATSTLGLGHWTPELAARWAEAHARPAGAGLGVLWRQWLGNLGFAAVGGTPVAASVTDVARFGREGGFPILWLLAALGAGFAFSRRRTRGLAAGLVGLLAFQLAAWWLLTHHQSRFLVFTALPGAVAVGLLVARPARSCRRGPGVALAGLLAVLAVAVPAAAGFAVLWGQTRAFLDPATGRPVRAAPWELVGALAAPGVEGLDTHPLDALPPGSRVLVVADNGGLFYADTPIVYASAFDENPLAPLMDRAAGDPALLAADLRAAGITHVWIGWSELARLGATYGVDPRLDPAALGRITGGWPGERTPTRALLRVPPATTR
>NC_017080.1|WP_014436656.1|1504701_1505229_-|GNAT-family-N-acetyltransferase
MNVERHEELRLAPALDREIAELIGRVFPTDFGGRSFFQNRHHARFLVRVGGTLAGHLAVCHRAVRLGYRVLDVLGIAEVAVDPAFRRRGIGVALVEAALREGRAAGVDAVLLFGVESIYARAGFVAVKNPITRIDMRGVRTGEIVREEAEHLMVHPLGESGWDATAPLDLAGFTF
>NC_017080.1|WP_014436657.1|1505300_1506323_+|Gfo/Idh/MocA-family-oxidoreductase
MVNVGVIGLGSMGNTHLAAYGSVPGCRVVAVADADEGRRTGRTGAGGNIEGQGSGGGFDFASVRAYADASELIADPEVHLVDVCLPTPLHARFAVAALRAGKHLMVEKPLARTAAEADTIVAAAEEASAGGQIAMCGMCMRFWPGWVWLKEAIDDGRFGRVLHARFRRVTSHPPGSFYADGDACGGALLDLHVHDTDFVRHAFGAPEAVFSRGYAKHTSRPDHVCTQYLFGDGGPVVTAEGGWAMHEGFGFEMQYAVNFERATAVFDIHQDPVLTLIDGEGKRAVDIPGGMGYQPELAYLIGCVERGEAPSTVTLADAANALRIVEAEGRSIASGRIEAL
>NC_017080.1|WP_014436658.1|1506523_1508452_+|glucosamine-6-phosphate-deaminase
MSTTTHPVAATERIPVEIHPSSAEASAAVAAEIAQLIRTKRAAGGNAVLGLATGSTPTGVYDELIRLHREEGLSFKGVKTFNLDEYVPMAPDALQSYRRFMDEHLFDHVDFDEGDTHVPDGLLPVEDTAAGCARYEEQIQEAGGLDLQLLGIGRTGHIGFNEPGSGKDSRTRLIWLDRLTRADAASDFFGAENVPRRAITMGVGTIMEAKRIVLMAWGEGKAPVVAAAVEGPETPAVAASYLQTHPNATFVLDEAASAGLTRTRCPWLVGSVDWTPRRQRSAAVWLAQRAGKPLLKLTDEDYNESGLQELVAEHGPAYDVNLRVFRELQRTITGWPGGKPSERRRAGDVQREGDDVFPKRILIFSPHPDDDVISMGGTLIRLVDQGHEVHVAYQVSGNIAVFDADAVRFADFYSELAGTRGSSQEGVLKEVVDEVDAKEPGAVDGELLKSIKQIIRRGECRAAARLCGLPTDRLHFLDLPFYETGKVRKKPLSREDVDLTAALLERIKPHQVYAAGDLSDPHGTHRVCLAAVMQACERLKDEDWFEQTAVWLYRGAWQEWLPEQVDMAVPLSPAELLKKRQAIFKHESQKDRAPYPGTDEREFWERAEERNRNTARLYDRLGLAEYEAIEAFVQWSPGQEIG
>NC_017080.1|WP_014436659.1|1508560_1510408_-|heparinase-II/III-family-protein
MPTSADPAAPGPPPPSPPLASMPEVRAGHPRVIATPERLAALRAQRAGDAVLDALLRNVEARARACLDQPTLQREQVGRRLLRVSREALERITACALAFHTTGDGRFARRAEEELLAVAGFTDWNPTHFLDTAEMAAAVGLGYDWLFDTLSDDTRVALRGALQTKALRQRTASRHGWHWQLATHNWNPVGFGGLTLAALAIAEDDPAALAELLAAVREHNPRALQAMAPDGVHPEGPAYWSYGTTYQCLLLDALRTALGTDLGLAQEPGFLASGGFMAHARGPTGRSFNFSDSRERVSFTPAFLWVAEEANAPGWLAAWRAGGWEEATAADGRFRVFTPLWWLRLDPTALGEDAPRSWSGGGPNPVAFFRERWSDPGAMYLAIKGGRGSVSHGHLDAGSFVLDADGVRWAMDPGKVDYESIESQGIDLWDRAQGSDRWRVYHHRNEAHNTLTIGGALHRVDGFAPLIAVEPLAPPGENLPGVAALDLAAPLGASVATATRRFVFDPGPDRGVTVTDELTGLAPAAREEPVAWTLMTEAAVEVDGDSATLRRDGKMLRVEMTSSRAGRWHAEPAAPPAGLLGPPLPGVTRLRWTTSAAPDGTLRLEATLRPLDPLR
>NC_017080.1|WP_053230088.1|1511219_1512506_+|family-10-glycosylhydrolase
MQDLPLCGFLLACLTLGIGSAAAAPAGSSADNPALAVRSAETRQDRGTEAPEEFRAAWVATVANIDWPSKPGLATRRQKEELLDLLDDAQEIGLNALIFQIRPHADALYPSELEPWSPYLSGTMGEAPRPAWDPLALAIEEAHARGIELHVWLNPYRAGHPDYEGGYPENHVSKTMPDAVHKLGDSGMWWIDPSHPGAKAHTLAVIEDVLTRYDVDGLHLDDYFYPYPSYLKGFPGGQFPDEKNHAAYRKRGGELSRDDWRRDQVNTLVREISELVGRVKPDARFGISPFGLPREGSVPFIRGFDQYEKLYADVALWLREGWVDYLAPQLYWPIEKPEQSFTELLRWWHANNPKGKDVYAGLYTSRLLGDEPGYRDTEIPLQVRWSRLLTPEGLQPGHIHFSMTALQQNPRGLVEKLRPLYDEPARKD
>NC_017080.1|WP_014436663.1|1512508_1513204_+|N-acetylmuramoyl-L-alanine-amidase
MPDAPARWLLPALLLVAPAVLAEPAPAPSIVMRERWGGEEVEYPEALRHEPATVLLHHAGVAWRAGADPAASMRGLLRFSREEKGWPDVPYHFVVAPDGRIFEGRDLRYAPDTNTSFDPTGYVNVELLGNFEEQRVNATQLDAAVRVVAWLADRLEMPTADLATHAGVAPGQTSCPGADFLRYLDGGSFHAAVDAARAGEPVEIEVLPPLPDGPQAFAEAEEPAVPKRSAN
>NC_017080.1|WP_041377992.1|1513279_1514074_-|hypothetical-protein
MSLFRFAFCVATPAALAAAPATAAPVVIEDFAEFNPTTQVVDPSFGIFRSGVGPAGSGSNGGAVSGTTAISSTPWDFTPGGGTSYVNNLSITDDNLFGGGLNYGVPTAWTLRHIANGGAPSAANLVSAAGGVGSVGFYLQTTSPDLSVRIALDETGGSGGTEGSVAQDVIADGEYHLYQWSLADAAQWNPLFGASNGELDGTTYTIDSIVFYDLGAEDGSTSDFNLAYVVADNTGPLVNVVPEPVGLLALGLAGFGLLGRRRAG
>NC_017080.1|WP_014436666.1|1514321_1515152_+|DUF1559-domain-containing-protein
MKPATPLRSAPMGFTLIELLVVISIIALLIGILLPALGAARSSARDMQCLSNTRQVAIAATAYATDNKDYSVRATSNGAFTADNITEYWSGKLVIGEYGATVEMYQCPVFEPDPSFTFDPYDGSALGAMLANPGHINWRMIDYGTNWYTVSGRRSYARPGETGQQAAARSIQTYNLADASNTIFVADSWYEAFAGAANQRGIYVIGGIPTNGGGVHARHGNQTINIGYMDGHASAFGVEDIRFNQPGGPWDPDNLGALYIPATSAATTPQNQWDEE

Crispr_ID: NC_017080_8

• CRISPR_ID: NC_017080_8
• CRISPR_location: 1535766-1535852
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_017080_8

Consensus_repeat	Method
GTGGCCTTCGGCCACCAGGCTGC	CRISPRCasFinder

spacers of NC_017080_8

>8.1|1535789|41|NC_017080|CRISPRCasFinder
CACGGCGTGTCAGCCCTACGGGCGAGGCTCGTGCGCGTGGT

CRISPR arrays and Neighbor proteins around NC_017080_8

CRISPR arrays

The CRISPR arrays of NC_017080_8

>merge|NC_017080|8|1535766-1535852|CRISPRCasFinder
GTGGCCTTCGGCCACCAGGCTGCCACGGCGTGTCAGCCCTACGGGCGAGGCTCGTGCGCGTGGTGTGGCCTTCGGCCACCGGGCTGC

>NC_017080|8|7|1535766-1535852|CRISPRCasFinder
GTGGCCTTCGGCCACCAGGCTGC	CACGGCGTGTCAGCCCTACGGGCGAGGCTCGTGCGCGTGGT
GTGGCCTTCGGCCACCGGGCTGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_017080.1|WP_053230231.1|1543474_1544779_+|replicative-DNA-helicase	unknown	unknown	gnl|CDD|273206
NC_017080.1|WP_041377995.1|1539734_1541120_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436680.1|1531577_1532414_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NC_017080.1|WP_014436682.1|1533595_1534477_-|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl|CDD|225076
NC_017080.1|WP_014436692.1|1546056_1546245_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436681.1|1532709_1533489_-|glycoside-hydrolase-family-25-protein	unknown	unknown	gnl|CDD|119373
NC_017080.1|WP_014436688.1|1541166_1542225_+|D-alanyl-D-alanine-carboxypeptidase-family-protein	unknown	unknown	gnl|CDD|350624
NC_017080.1|WP_014436683.1|1534719_1535634_+|PEP-CTERM-domain-protein	unknown	unknown	unknown
NC_017080.1|WP_014436677.1|1528486_1529299_+|DUF1559-domain-containing-protein	unknown	unknown	gnl|CDD|225076
NC_017080.1|WP_014436689.1|1542243_1543062_-|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl|CDD|224007
NC_017080.1|WP_014436691.1|1544807_1545920_-|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	unknown	unknown	gnl|CDD|234666
NC_017080.1|WP_014436678.1|1529305_1530739_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270303
NC_017080.1|WP_014436674.1|1524095_1525235_+|GntR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|380491
NC_017080.1|WP_014436675.1|1525388_1527056_+|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|378963
NC_017080.1|WP_014436684.1|1535880_1536921_-|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl|CDD|376556
NC_017080.1|WP_014436686.1|1538450_1539572_+|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|334462
NC_017080.1|WP_014436676.1|1527211_1528363_+|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	unknown
NC_017080.1|WP_014436679.1|1530735_1531581_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NC_017080.1|WP_014436693.1|1546327_1546999_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436685.1|1536975_1538454_+|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl|CDD|334815

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_017080.1|WP_014436680.1|1531577_1532414_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.90775e-71
NC_017080.1|WP_014436682.1|1533595_1534477_-|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl|CDD|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	1.51477e-09
NC_017080.1|WP_014436681.1|1532709_1533489_-|glycoside-hydrolase-family-25-protein	gnl|CDD|119373	cd00599, GH25_muramidase, Endo-N-acetylmuramidases (muramidases) are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. This family of muramidases contains a glycosyl hydrolase family 25 (GH25) catalytic domain and is found in bacteria, fungi, slime molds, round worms, protozoans and bacteriophages. The bacteriophage members are referred to as endolysins which are involved in lysing the host cell at the end of the replication cycle to allow release of mature phage particles. Endolysins are typically modular enzymes consisting of a catalytically active domain that hydrolyzes the peptidoglycan cell wall and a cell wall-binding domain that anchors the protein to the cell wall. Endolysins generally have narrow substrate specificities with either intra-species or intra-genus bacteriolytic activity.	5.19743e-51
NC_017080.1|WP_014436688.1|1541166_1542225_+|D-alanyl-D-alanine-carboxypeptidase-family-protein	gnl|CDD|350624	cd14852, LD-carboxypeptidase, L,D-carboxypeptidase DacB and LdcB, and related proteins. This L,D-carboxypeptidase family includes LdcB LD-Carboxypeptidase from Streptococcus pneumoniae, Bacillus anthracis, and Bacillus subtilis, and L,D-carboxypeptidase DacB from Streptococcus pneumonia and Lactococcus lactis. These enzymes are active against cell-wall-derived tetrapeptides and synthetic tetrapeptides lacking the sugar moiety but are inactive against tetrapeptides terminating in L-alanine. L,D-carboxypeptidase DacB plays a key role in the remodeling of S. pneumoniae peptidoglycan during cell division. It adopts a zinc-dependent carboxypeptidase fold and acts as an L,D-carboxypeptidase towards the tetrapeptide L-Ala-D-iGln-L-Lys-D-Ala of the peptidoglycan stem. This family also includes vanY D-Ala-D-Ala carboxypeptidase which is vancomycin-inducible and penicillin-resistant. VanY hydrolyzes depsipeptide- and D-alanyl-D-alanine-containing peptidoglycan precursors; it is insensitive to beta-lactams. All these enzymes belong to the MEROPS family M15 subfamily B.	6.51922e-15
NC_017080.1|WP_014436677.1|1528486_1529299_+|DUF1559-domain-containing-protein	gnl|CDD|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	1.43697e-09
NC_017080.1|WP_014436689.1|1542243_1543062_-|sugar-phosphate-isomerase/epimerase	gnl|CDD|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	4.29369e-24
NC_017080.1|WP_014436691.1|1544807_1545920_-|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	gnl|CDD|234666	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional.	1.39636e-136
NC_017080.1|WP_014436678.1|1529305_1530739_+|extracellular-solute-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.29787e-47
NC_017080.1|WP_014436674.1|1524095_1525235_+|GntR-family-transcriptional-regulator	gnl|CDD|380491	cd06267, PBP1_LacI_sugar_binding-like, ligand binding domain of the LacI transcriptional regulator family belonging to the type 1 periplasmic-binding fold protein superfamily. Ligand binding domain of the LacI transcriptional regulator family belonging to the type 1 periplasmic-binding fold protein superfamily. In most cases, ligands are monosaccharide including lactose, ribose, fructose, xylose, arabinose, galactose/glucose, and other sugars. The LacI family of proteins consists of transcriptional regulators related to the lac repressor. In this case, the domain sugar binding changes the DNA binding activity of the repressor domain.	2.90035e-48
NC_017080.1|WP_014436675.1|1525388_1527056_+|FAD-dependent-oxidoreductase	gnl|CDD|378963	pfam12831, FAD_oxidored, FAD dependent oxidoreductase. This family of proteins contains FAD dependent oxidoreductases and related proteins.	5.08807e-77
NC_017080.1|WP_014436684.1|1535880_1536921_-|N-acetylmuramoyl-L-alanine-amidase	gnl|CDD|376556	pfam01510, Amidase_2, N-acetylmuramoyl-L-alanine amidase. This family includes zinc amidases that have N-acetylmuramoyl-L-alanine amidase activity EC:3.5.1.28. This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls (preferentially: D-lactyl-L-Ala). The structure is known for the bacteriophage T7 structure and shows that two of the conserved histidines are zinc binding.	6.35417e-12
NC_017080.1|WP_014436686.1|1538450_1539572_+|FAD-dependent-oxidoreductase	gnl|CDD|334462	pfam01266, DAO, FAD dependent oxidoreductase. This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.	2.45814e-10
NC_017080.1|WP_053230231.1|1543474_1544779_+|replicative-DNA-helicase	gnl|CDD|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NC_017080.1|WP_014436679.1|1530735_1531581_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	7.52766e-74
NC_017080.1|WP_014436685.1|1536975_1538454_+|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl|CDD|334815	pfam02113, Peptidase_S13, D-Ala-D-Ala carboxypeptidase 3 (S13) family.	4.19157e-60

Protein sequences

>NC_017080.1|WP_014436683.1|1534719_1535634_+|PEP-CTERM-domain-protein
MRKITTPAAALLLAAAPAALAAPGDILFQDDFESGSIASYTVEALSTFDTGDAATYGFDYGSFGVPGVSGNGLLLETDDALTVFVNGLSVSTPISIKFDAIASAVSGGSTEALTAGVANALLPFDIDLSPSDLSESAASNGLFVGALTDSDTAGSGDYGVYDSLGGAVPTALSFMDAAGLTDTGIGFGNAAVLPEIPGQSSAGVLDGRSAEFEILVDGARLQWFINGTLITDVTASAAPTGTVGIGISDPFPGFNNGTVGQGTGTAFAIDNLLITETAAIPEPTTLGVAAAGLALLAGRRRRVA
>NC_017080.1|WP_014436682.1|1533595_1534477_-|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MNPRPHTHPAHGFTLIELLVVISIIALLIGILLPALGAARGAARGLASLSNVRQVEIASQTFLADNKQRHLPFSNVFNFEPYQGANLFSGANSGNPTPNSERWIWVSKLVSDDYMPGSAVFICPELETTDAKFLNVPTKGGPSANWKGHPDWFRSHYGMNFMGVGSMLEQPVAGSDPSLANKSPEAGMIRNPTETIHFADSKNLAMETGAPDLGSTLGYTPGETAGVAYLFPGPAAPTAAYGHADARHGNSINVSYADGHGSAVRVQDPDFVWGPDELTDWVSSRDLNDWDRN
>NC_017080.1|WP_014436681.1|1532709_1533489_-|glycoside-hydrolase-family-25-protein
MTRRRLPILAVPLLLAPGASARLLGIDVSNFQGDVDWDTVQAQPNVDFAFLKATEGVGFRDAKLFRNVSEANRVDLPIGVYHFARPDTGGSNDPLNEADYFVDTAGFAMGEGYLPPVLDMEVFQSAGRSFLTSWSDRFLDRVESRTGVRPIVYASEFYAEDFLDASVLQTELWVANYTRNPNLNPTDIRGWPQGWLFHQYTDRRDLPGINTGGVDSNVFDGTLADLDALRFSAPVPEPATALLAAAGLTLLGGRRRRVG
>NC_017080.1|WP_014436680.1|1531577_1532414_+|carbohydrate-ABC-transporter-permease
MSGLSPTARPLPLLVAMYLGALALMLLAVGPAIWLVGVALSPPSVPLSRLPGPSEMTLGNFEGAWNEAQLGRALANSVIVTAAQTLLNVLLAAMAAYPLARMRFRGRGLVFVLVLATIMVPEQVILVPLFRTVVGLGLYDTLAAVVLPFSVTAFGIYLCRQAFLALPMELEEAATLDGAGPWRTWWSVMLPLTAPTLATLAVFSVIGAWSNLLWPLVVLQSRDTFTLPVALNQLLGVFATNQRFAYAGAVLAVLPVVAFYALASRWLKGGMLGGAVKG
>NC_017080.1|WP_014436679.1|1530735_1531581_+|sugar-ABC-transporter-permease
MKRITPWLFLFPALLVLGVFVVATFVQVLWYSFTDFNAFNDGRFVGLANYRRLLADEKFWFCLGNSFLYLLVTPVLMALALAAALLVHAGLRGLWGLRAWLFLPVVTPTIVAAIAWRLLLDEDGGLFNQVLAWLGSGPVYWLSERPWSLMSAMMVTVWKGFGYFMMVFLAGLVGIPRELHEAAEIDGAGRWSSFLHVTLPGLRPVLVLVALISSISALKVFEELYVTIKGAPVSQQTAVPLIFDTAFEQGDFGRACAIGVVLFAVVLVFSLVQLRVVRDQA
>NC_017080.1|WP_014436678.1|1529305_1530739_+|extracellular-solute-binding-protein
MVARFLLIAVLAGLPLLNACDRRSSDAKRLEVWTLALSPYFDDYLTGVFGAFEAEHPGTEVVWVDVPFDAINRKLVAAAAAGRAPDVVNLSDRDFARVAALGGLADLDPLLADGVVERYLPGAVRGLRLNGGLRALPWYLTTQVRMANAATLARGGLTPDTLANDWTGLRDQARAYHEETGGFLFSVPLGETSELPMMLLSEGIRPFRETPDGLVADLTREEVAGYVSAWVDLYREGALPRAAATRDHTHLVEGYQKGEIALIQTGSNMLGRIRDAAPDVYGETVVKPGVTGRLQRSHIAAMVVGVSGRSEHPEEAAALAAFLTSPASQTGLSKQSGVLPSTPASLDDPYFAFPEGASDDPEARLTEARATSAASLRTAVAFTPAMETWPELRRAFNEGIKRALLGGEPTAGVLASIEAEWNRILAAARPVGPDALPPASRVPRPLGGGVGSSVSVPTPQGAWHPVPAAGLVLPEAA
>NC_017080.1|WP_014436677.1|1528486_1529299_+|DUF1559-domain-containing-protein
MNASSPRRSGFTLIELLVVISIIALLIGILLPALGAARASARTLSCLSNIRQMTIATLNYATDNKDELPTTFVTDNNNDGTNDLWFDKHMIGYYLPDSGVSSSASIDGFAFICPSDEGSVRTYSMNARAASDAKEVGINNERNSSFDLNAGAGTQLILFGEGWGRFGTEAQHFSNATIGAEAGTTPGGRFGGTATTFNNLAFYGAANAAQANTNYLLHGGDDINRADGASNWTFLDGHGETAQQETLYDASTGLSTYKFLWSETDRQSEP
>NC_017080.1|WP_014436676.1|1527211_1528363_+|PEP-CTERM-sorting-domain-containing-protein
MTATPACKGLLAIAAAAFGGSAFAAPSTSVDFYNLGGFSLVGSSPTGSIGSAASLAYDGSTLYLGQGAGPATSAAPFTFVDDAFGANNIGTSFGSAVGGNGVTGLDVADGILVGVSTNGGANDTLQVFNVATTPTATAAGVVSPGDVGMTRFDAVALDPGFVAGTQGGAGVSAVQFGSGNRRLIDPATGNLLNTGPGYFNGAGGSGFRGLDYDPATGDVYARTVNGIQVGVRSGDNGVQTVGGAAGTSQVVADPSGFAVGLNVAYLGDFGGNADDALFIYNDLSDVTSTSSFDALNLAQQDGAAVAVNFLNADGSAAFAEVLQTSNQTGVFDFSFDPGTGQLAVLDVANAYVYLFDGEPIPEPATAAVVALGGLALLGRRRTA
>NC_017080.1|WP_014436675.1|1525388_1527056_+|FAD-dependent-oxidoreductase
MPDTLQTPILIVGAGCGGFAAALAVARAGGSCVLTEPTDWVGGQLTSQAVPPDENAWIEPDVGDAQAATASYLAFREAVRSRYRRAECLTAAAAARPRLNPGDGWVSRLCFSPRIGQEVLRETIRPHVEAGRIRLLLEHEPVSADGAANRVRSVTVRGGDGRETRIAADYVLDATEAGDLYPLTGCEHAVGAECRDAYGELHAPAGRGDGPGGSHPRDQQAVSWCFAMEHRPGRNHVGPEPEGYARWRSFVPDLDPPWCGPLFSWLSPGVDERPREMGMVPWPDRPADGVWELWRYRRIVDASAHTDGRPDVCLVNWVQMDQFVEPVLGVSPDAARAALKLAKQQARCLFHWMQTEAPRHDGGRGYPGLKLRGDELGTDSGFAKAAYIREPRRLLARTIIHEGHLGAAQRRAAGEPEVPELATTLGESVPAAEPFADAVGVGHYRLDLHPSCAGRNSVYVEAAPYRIPLGSLIPVRVENLLAAGKGFGVSHVVNGCTRLHPVEWTVGEAAGELAAWCLEHGRTPAEVHADAAQTRRFQDRLRARGFALAWPWEKS
>NC_017080.1|WP_014436674.1|1524095_1525235_+|GntR-family-transcriptional-regulator
MIGRPATPPERPRDAAAGPLRPVRPRAGALLYVTVRDALHDAIRDGRFAPGERLPSTKDLAAMFEVSLVTTHRAMQSLEARGVLDRVQGRGTFVTERSERRVRRLAVVLQPQASLADYYYGDLLDGMNRAARELGADLLIRHATEPVRRVVPASNGSSPERVWGGCDAHLLVNPLPEAAEAFAVTLEDGVPSVLVGARHGDMPHVDVDNADLIEQAVTHLHDRGHRRILFVGGAGNLSNSRDRLDAFATTCEAFKVAAAPRLVASSWRLHDGEKRELGDLLGSSGGPTAVVAAGYYLALDVYDVAGRRGLEIPKHLSVVGVGDPMSAPHLSPPLTTMRQPLVELGHAAVEAAIHLIEGEPQPSINLRARLVPRASCRAI
>NC_017080.1|WP_014436684.1|1535880_1536921_-|N-acetylmuramoyl-L-alanine-amidase
MHPTPHAPAALLLAACLAAPAAGGEAHRDHAHAQPGRAAPGTELSRTGDEIVVAGRLFHTGTPVKLWFDDGGYNGYDVNLRFQGPENARWTPESGVPAARYNQRVDRFGFRDDLSEEEREAIRDGWTLEQLGTVVDQFVMHYDVCGTSAYCFEVLHDHRGLSVQFMLDADGMIYQTLDVAERAWHAAQANSRSIGIEIANIGAYPPDDTSVLEKWYARDGRGWRIVLPDDRPLGHLDPEGVYRPSGDGPVTGIIHDRDLVQFDLTDDQYTALIHLTATLTELFPKLPNDYPRGADGKADRQELSEQDWKDFSGLVAHWHLDPDKVDPGPAFDWERVRLGVEKLLGE
>NC_017080.1|WP_014436685.1|1536975_1538454_+|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MIRLAAALAALVAGNASGELQREVRELIASAALGDAVAGVVVAELTPGGSEVRVDLNGDLALGPASNMKLVTTAAALDLLGEGFAFETTLSLLPAGDRAPSLLVRGSGDPGFGDPPLLEAAGETPAGVVARWVEAVRATGRTRFATLRMDDAIFDAQRVHPDWPADQQAYWYCAEVAGINFNDNCIDVRREPGPEPGAPAVLHFFPSFPGLAAQATNETVTGESDTFDFSRPADRNAFSFTGVVDGPGLDYAAVHDPALFFGRHLAHELAEAGVGVGEVVRGGAPAGVVPESLGVVRTTLAGVLDRTNRNSQNLFAEALLKRMGREAAGEPGSFANGSAAVRSYLARVLPEADLSGVVVADGSGLARTNRLTARLLVGLLDRVTRLPPAEARTYRESLAELGRSGTLRHRGEGVRTARVFAKTGTISGVSALSGYLVTPATEEAAERVHAFSMLFNGFAPPVSTRDVRRVQDEVLALLDRRLAPAATPAESP
>NC_017080.1|WP_014436686.1|1538450_1539572_+|FAD-dependent-oxidoreductase
MRRRALLGRAAALAAAATLPPGCRTATLRGGPPVPRGLHPAPSLDEPVFLGSRVGLRPWRAGGFRVEADRRGTKPLVHNYGHGGAGWTLAWGSAVEAADLLGTPRAVTVLGAGIVGLTTAAVLAERGFRVAVAAAERGTGATASAAAGAQFAPAGVVPPAGPAGAARLGRMLLEGHRRFTRTLPSLAGAVLPRVNYSTRPPERIALGRLPVSISRARPVSPMPIRRRGGPLDGWAYDTLCIEPPAYLHGLRGHLQGQGVRFEHRRVRGRLDLGEIPGEAVVLCLGVGAREAAGDPAVVPIRGQIECLAPPPGGGLRYMLSDRGYAFGRRDCTVLGGTYDRGDEGLAFRAADRAATLAKARRFFGTPDAASLPR
>NC_017080.1|WP_041377995.1|1539734_1541120_+|hypothetical-protein
MIGAQDSKPESGDWNWERQPAAATLLAGWLEAAQAANPWLRDFAERLHAESGNRLADLVDLWSRPDTPDARLAIERAGYRPLEAAAGGHLFHHPRGMFPRVLLHPRAGVAVDLRVESCADFGSAHGLSAAIEGVPGAPLRRLAVYTAGGVAVRAARRRGSLAAVITGGPCEPTLTDQALVLESFRGRPRRFADEAAGFDELAERVDAAVARVGRDVACSLFFAAERDFWERRNAAARWQASRQAALGIGWANHDHHTYRSSRVHFHRLVALFEKLGFHCRERFSPGAAAGWGAQVMEQPVCGIVTFNDVDLSPAELRTDFAHTPLGERDTLATVGLWCGLHGESILQAGMHHLECTFDFGELREQMASGGIETMRPFTDFDHLKQAFTRGELWQVEEGRLNRLVDAGRISGAEAEAFRRDGAIGSHLENLERNEGFKGFNQRGVTEVIHATDPRRQPSSPA
>NC_017080.1|WP_014436688.1|1541166_1542225_+|D-alanyl-D-alanine-carboxypeptidase-family-protein
MRRPAPLPIPLLTALAAALAAGCSSAPPPPDPGLTRTPATASAPAPADAATLAERLAYGSRTRTKLPPAYLHERLRERAATPAVDAAFERVRADDTPANRSALLHALERGFVHAETTSSLDLLGPELGQRFRSFNWHDDDYPGGPVGPNEHWAGTLADALDGVSPERRANRSAVAALRREEATEPIWERLLAAWRPIPGEEGHRLNRHAVGPYLAMREAAAADGVELVIVSAHRDPRRARANAARAANPFAVASFSSHALGLAIDLALPIPGGPAGDAAAFPLSTRPMARVVDMRRSPVHKWMHLHASGFGWYPYQHEPWHWEYNPPGFRAVLLEDLGGGPSPRGAPPASPG
>NC_017080.1|WP_014436689.1|1542243_1543062_-|sugar-phosphate-isomerase/epimerase
MRLAICSWSLQATSPADLVEKVRATGIPRVQLRLDDVAEDPAWADAPAALREGGVELVSGMMQTRGEDYSTLDTIRVTGGLLPDEHWEHNRDTAARVADLAAGLGLPSVSLHAGFLPHDAADAADHPLTRRTGAVADLFADRGLDLLLETGQEDAATLDRFLDAADRPNLFLNFDPANMILYGMGDPLAALRTLLPRVKQAHAKDAVPAAEPGTWGTEVPVGEGAVDWAAFLEILRGGGYDGELILEREAGDARVDDLRAGAAELRPLMRPA
>NC_017080.1|WP_053230231.1|1543474_1544779_+|replicative-DNA-helicase
MALLGSMILDWRTVGDVVQVLVDAEVFHKPEHQSIYAVLVELYDKHQSIDMVQLHAKLSDRGVLEQVGGLDYLVELGEAVPSASGAVRYAEIVRDKALLRKMIHTAGTILEDCHGCDEPVVELFDKIESTIFEIAEKRTQDGTAALSVLLQETFDKLEAQDGQVITGVETGFKDLDEMTNGLQPGELIIVAARPSMGKTAFALNVSEHIGAVAGRPVGVFSLEMSKQQLAQRLLCSRSQVNSHRLRRNMLSREDFSKLSHAVGELSEAPIYIDDTAGLTLMGLRAKARRMKQRYGIEALMVDYLQLMSNPSTKDGRQNEVSAISRGVKALARELECPIICLSQLNRAAEQREGHRPRMSDLRESGSIEQDADVIMMLHREDYYHRGDPEHVDNNEAEVIVTKQRNGPTGTVKLMFDGGTTRFKNLALGGSSPSY
>NC_017080.1|WP_014436691.1|1544807_1545920_-|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA
MRTDELDFHLPERLIATTAAEPRDSARLMVCDRATGSVHHRRVSDLPGLGLVGDGDLMVVNRTAVLPARFEATRAGTGGRVTGLYLGHDDAGLWTAMLKSGGRPRIGERLQLGDACELELLSPRGGGRWRLRPRDLAGEPMPIDASLEVLRRVGLPPLPPYLLRARERAGGPADLPGDAERYQTVFADRSAASQRSVAAPTAGLHLTEAVLAGLRAAGVRTEAVTLEVGPGTFLPVRADELAEHPMHAERWHAPAATLDALRASRAAGGRVLAIGTTSVRTLESLPFPLPEPAPTAGLAGETDLFIRPDAGFAFRNTDLLLTNFHLPRSTLLALVAALPGVGLDRLLGWYEEAIGEAYRFYSFGDAMVVV
>NC_017080.1|WP_014436692.1|1546056_1546245_+|hypothetical-protein
MIRDTSRFLTWAMAADRGLARIPTRRSDDGGFSALMRRPAARLMASHWWHRAVDRAGEAFGR
>NC_017080.1|WP_014436693.1|1546327_1546999_+|hypothetical-protein
MNDAATAPLRARISKGYRIRLALIGLGLTAFGCWALYDGFIEYPRRAEVYAQLQQMQEDHVDWATRWQAYAAERGLETNPNKVKPLEDKDIWTQYVMAAICLPIGGFFLLNFVRASGRKVEADALGIRGREGSATWDEVHGLDDARWRTKGISRVLFRDAGGAEGKIVLDDWKYEREPTVAIHARVAEKLGLEDGAAVPAEGAETPPPAEAAEAAEPDKPSGA

Crispr_ID: NC_017080_9

• CRISPR_ID: NC_017080_9
• CRISPR_location: 1661178-1661294
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_017080_9

Consensus_repeat	Method
GCCACGCCGTCCCCGTCGTGGTCGTGCGGGACG	CRISPRCasFinder

spacers of NC_017080_9

>9.1|1661211|51|NC_017080|CRISPRCasFinder
CCCCCGCCGGCCGCCGACCCGCCATCGCCGTGCGCCTCGGGGCCGTGGTCC

CRISPR arrays and Neighbor proteins around NC_017080_9

CRISPR arrays

The CRISPR arrays of NC_017080_9

>merge|NC_017080|9|1661178-1661294|CRISPRCasFinder
GCCACGCCGTCCCCGTCGTGGTCGTGCGGGACGCCCCCGCCGGCCGCCGACCCGCCATCGCCGTGCGCCTCGGGGCCGTGGTCCGCCACGCCGTCCCCGTCGTGGTCGTGCGCGACG

>NC_017080|9|8|1661178-1661294|CRISPRCasFinder
GCCACGCCGTCCCCGTCGTGGTCGTGCGGGACG	CCCCCGCCGGCCGCCGACCCGCCATCGCCGTGCGCCTCGGGGCCGTGGTCC
GCCACGCCGTCCCCGTCGTGGTCGTGCGCGACG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_017080.1|WP_014436792.1|1664346_1664754_+|CrcB-family-protein	unknown	unknown	gnl|CDD|223317
NC_017080.1|WP_014436784.1|1653940_1655188_-|tyrosine--tRNA-ligase	unknown	unknown	gnl|CDD|235645
NC_017080.1|WP_014436786.1|1655799_1657344_-|NADP-dependent-phosphogluconate-dehydrogenase	unknown	unknown	gnl|CDD|236453
NC_017080.1|WP_014436798.1|1669681_1670686_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_053230099.1|1663461_1664133_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436789.1|1658884_1659970_-|dipeptide-epimerase	unknown	unknown	gnl|CDD|239435
NC_017080.1|WP_014436783.1|1653086_1653944_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436796.1|1667990_1668737_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|225136
NC_017080.1|WP_014436794.1|1666892_1667738_-|thiazole-synthase	unknown	unknown	gnl|CDD|234687
NC_017080.1|WP_014436797.1|1668803_1669685_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436793.1|1664763_1666737_-|hypothetical-protein	unknown	unknown	gnl|CDD|372652
NC_017080.1|WP_014436799.1|1670727_1671222_+|dihydrofolate-reductase	unknown	unknown	gnl|CDD|238127
NC_017080.1|WP_014436800.1|1671456_1673250_+|DNA-polymerase/3'-5'-exonuclease-PolX	unknown	unknown	gnl|CDD|236311
NC_017080.1|WP_014436795.1|1667743_1667944_-|sulfur-carrier-protein-ThiS	unknown	unknown	gnl|CDD|340451
NC_017080.1|WP_154661793.1|1650804_1651953_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014436785.1|1655288_1655705_-|DUF393-domain-containing-protein	unknown	unknown	gnl|CDD|367833
NC_017080.1|WP_014436781.1|1647370_1650610_+|hypothetical-protein	unknown	unknown	gnl|CDD|274175
NC_017080.1|WP_014436788.1|1658300_1658774_-|50S-ribosomal-protein-L13	unknown	unknown	gnl|CDD|181703
NC_017080.1|WP_083855083.1|1657562_1658171_-|30S-ribosomal-protein-S9	unknown	unknown	gnl|CDD|178888
NC_017080.1|WP_014436780.1|1646803_1647340_+|hypothetical-protein	unknown	unknown	gnl|CDD|274090

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_017080.1|WP_014436792.1|1664346_1664754_+|CrcB-family-protein	gnl|CDD|223317	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning].	1.69523e-19
NC_017080.1|WP_014436784.1|1653940_1655188_-|tyrosine--tRNA-ligase	gnl|CDD|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
NC_017080.1|WP_014436786.1|1655799_1657344_-|NADP-dependent-phosphogluconate-dehydrogenase	gnl|CDD|236453	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase.	0
NC_017080.1|WP_014436793.1|1664763_1666737_-|hypothetical-protein	gnl|CDD|372652	pfam13624, SurA_N_3, SurA N-terminal domain. This domain is found at the N-terminus of the chaperone SurA. It is a helical domain of unknown function. The C-terminus of the SurA protein folds back and forms part of this domain also but is not included in the current alignment.	0.00498845
NC_017080.1|WP_014436789.1|1658884_1659970_-|dipeptide-epimerase	gnl|CDD|239435	cd03319, L-Ala-DL-Glu_epimerase, L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	1.57929e-93
NC_017080.1|WP_014436796.1|1667990_1668737_+|methyltransferase-domain-containing-protein	gnl|CDD|225136	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].	2.73467e-32
NC_017080.1|WP_014436794.1|1666892_1667738_-|thiazole-synthase	gnl|CDD|234687	PRK00208, thiG, thiazole synthase; Reviewed.	1.52434e-137
NC_017080.1|WP_014436799.1|1670727_1671222_+|dihydrofolate-reductase	gnl|CDD|238127	cd00209, DHFR, Dihydrofolate reductase (DHFR). Reduces 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH as a cofactor. This is an essential step in the biosynthesis of deoxythymidine phosphate since 5,6,7,8-tetrahydrofolate is required to regenerate 5,10-methylenetetrahydrofolate which is then utilized by thymidylate synthase. Inhibition of DHFR interrupts thymidilate synthesis and DNA replication, inhibitors of DHFR (such as Methotrexate) are used in cancer chemotherapy. 5,6,7,8-tetrahydrofolate also is involved in glycine, serine, and threonine metabolism and aminoacyl-tRNA biosynthesis.	6.5046e-57
NC_017080.1|WP_014436800.1|1671456_1673250_+|DNA-polymerase/3'-5'-exonuclease-PolX	gnl|CDD|236311	PRK08609, PRK08609, DNA polymerase/3'-5' exonuclease PolX.	6.37603e-158
NC_017080.1|WP_014436795.1|1667743_1667944_-|sulfur-carrier-protein-ThiS	gnl|CDD|340451	cd00565, Ubl_ThiS, ubiquitin-like (Ubl) domain found in sulfur carrier protein ThiS. ThiS, also termed Thiamine biosynthesis protein (ThiaminS), is a sulfur carrier protein involved in thiamin biosynthesis in prokaryotes. It has the beta-grasp ubiquitin-like (Ubl) fold with low sequence similarity to ubiquitin (Ub), and is activated in an ATP-dependent manner by sulfurtransferases, similar to the activation mechanism of Ub-activating enzyme E1. ThiS has common evolutionary origin with Ub-related protein modifiers in eukaryotes, a beta-grasp fold as Ub, and is closely related to proteins MoaD and Urm1.	3.80109e-19
NC_017080.1|WP_014436785.1|1655288_1655705_-|DUF393-domain-containing-protein	gnl|CDD|367833	pfam04134, DUF393, Protein of unknown function, DUF393. Members of this family have two highly conserved cysteine residues near their N-terminus. The function of these proteins is unknown.	8.04044e-29
NC_017080.1|WP_014436781.1|1647370_1650610_+|hypothetical-protein	gnl|CDD|274175	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D. In Gram-negative bacteria, proteins that have first crossed the inner member by Sec-dependent protein transport can be exported across the outer membrane by type II secretion, also called the main terminal branch of the general secretion pathway. Members of this family are general secretion pathway protein D. In Yersinia enterocolitica, a second member of this family is part of a novel second type II secretion system specifically associated with virulence (See ). This family is closely homologous to the type IV pilus outer membrane secretin PilQ (TIGR02515) and to the type III secretion system pore YscC/HrcC (TIGR02516). [Protein fate, Protein and peptide secretion and trafficking].	8.72245e-58
NC_017080.1|WP_014436788.1|1658300_1658774_-|50S-ribosomal-protein-L13	gnl|CDD|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	3.31211e-69
NC_017080.1|WP_083855083.1|1657562_1658171_-|30S-ribosomal-protein-S9	gnl|CDD|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	6.00848e-58
NC_017080.1|WP_014436780.1|1646803_1647340_+|hypothetical-protein	gnl|CDD|274090	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.	0.000276953

Protein sequences

>NC_017080.1|WP_014436789.1|1658884_1659970_-|dipeptide-epimerase
MKLILHPIEIPLRHPWTLAHGTRTVQRNVVVELHDEQAGLSGFGEAAGIPYFGVTTATLIAALEGVRGVAEGVPLLDPESWWAGLAPHLAEQPFALAALDAAAHDLWAKRAGSTTRRMLGFGEDEAAYPPSDFTIGLAEPDAMAARLAERPGFPVYKVKLGSGDLAADLARVERLREETDAPLRVDANTGWTLEQAIEAGPRLVDLGVEFLEQPLRVDAPEAERRRLFEESPLPVIADEACFGEADVARCAGFFHGVNLKPAKCGGLTPALRMAAEARDLGLRVGVGCMTETTVGISATAQLLPAVDFADLDGALLLADDVVASAAAGVTLDSGRLRFPPSAGNGVQPAAASLLRLRTASV
>NC_017080.1|WP_014436788.1|1658300_1658774_-|50S-ribosomal-protein-L13
MNRQTTLARRNGQEETFPRGWAIVDAEGAVLGRLAAKVAFILQGKDKPHYTNHVDVGDFVVVVNADKVRVTGTKLDDKFHERFSGHPSGRHITTWREVLDGKHPERLVETAVRRMLPKSKLGVAQYGKLKVYAGAEHPHAAQNPRTVSLASLALQTS
>NC_017080.1|WP_083855083.1|1657562_1658171_-|30S-ribosomal-protein-S9
MADDADNDLTAGAAGDEAGATAIAEPAAAVAPTTLALGDPNPVAEEAPAAAPRPLAEPARRDAGGFVWGTGRRKTAVARVRVRPTKNEGEGGGEFVISSTKAKNKSIDEFFSEPQHRIACRKPQEATGMTGKLDIYVNVQGGGITGQAEAVLLGVARALKGYDPTLEQTLRDAELLTRDSRKVERKKYGQAGARKRFQFSKR
>NC_017080.1|WP_014436786.1|1655799_1657344_-|NADP-dependent-phosphogluconate-dehydrogenase
MPEPTSDIGLIGLAVMGQNLVLNMADHGFDVAVYNRTTSVMEDFIKEVEAEQPSASRVHGHAELADFVASIKCPRKIVLMVQSTAVASTDRDAVDKVTDQLEPLLQEGDLIIDGGNSNWNATIRREKEYAAKGIRFFGSGVSGGELGARFGPSLMPGGDPEAWESLKPIWEAIAAKVDRETGKPIERFDPSNPVTLEEGEPCTGYIGANGAGHYVKMVHNGIEYIDMQLICEAYFLMKQLIGMQPDEMSQVFARWNEGDLDSFLIEITTDILQQRDPTDPSRFFVDVVLDTAGQKGTGKWTSISALDMGIPANAMAEAVFARCLSAIKDERVAASEVLRGPAEAVDFGDQGEFIENIREALYCSKICAYAQGFQLMREAQNEFDWDLDFGQIAAMFRGGCIIRARFLQKITDAYAEDPKLANLLLNDYFNEAVNKGQAAWRKVVSLAVLNGVAVPAFASALAYFDSYRTATLPQNLLQAQRDYFGAHTYERVDRPRGEKFHVDWPEENRPQLTL
>NC_017080.1|WP_014436785.1|1655288_1655705_-|DUF393-domain-containing-protein
MADLEGKSLVFYDGHCGLCHRWVRFVLPRDPADRFVFTPLQGDTIQEVLTERQIAGLPDSIVLRDPDGTLHTRSDAVLRILRGVGGGWALLAALGRVVPRSLRDLVYDGVARIRHRVFGRPAEACPMMPARLRHKFVF
>NC_017080.1|WP_014436784.1|1653940_1655188_-|tyrosine--tRNA-ligase
MAEDTPNLYDVLEARGLVAQCTDAGIRERLGSPVTLYCGFDPTADSLHLGHLVPVMALAHAQRCGHKPLALVGGATARVGDPSGKNTARRMLSPEEIDANALAIGEQIGRIVRFDDSPTGAKLVNNLDWIAGLTWLDFLRDVGSRVSVNRMVGMESVKPRLAEGSGISFLEFSYMLLQAYDFAHLGAEHGCTVQIGGQDQWGNIVFGTELGRKMHGLDLAALTMPLITKADGRKFGKTEAGAVWLDAERTPVFDFFQFWRNADDGDVGRLLRYFTFLPIDEIEALETASGAGINAAKARLAYEVTRLVHGEPAAAAARDGAAKAFAGGAVDDAVPHGPLDLASPVGVVELMKRAGFAKSNGEARRLIQGGGVRIHGDKVADPMAEVSAGDARGGHVLLRAGKKRLYRFDVAEAGS
>NC_017080.1|WP_014436783.1|1653086_1653944_-|hypothetical-protein
MISLTPAELGAAIGLGVAGNFAGHLEQAGEASDFAGVEAADGAPKGVFPWYVRGGELGVNPVSATHIRLPDDPAAACQIEPELALWSEVRYEGEAVAAVEPTHFGAFNDCSWRARPAASPSGPVKISHKKHWGPASQGLAADQLLPLDRFAAGGTLDRFRLASFLVRDGVTHAYGEDAPVAGYGYFHGRLLGWLVEKLNTQRDAGPLEDASALLAAAGRPGRAVIAIGATRYLPFGETTFLREGDEAVVVAYDGGVHTPAAVAEAVASGAVRLETASLLRQRVIR
>NC_017080.1|WP_154661793.1|1650804_1651953_+|hypothetical-protein
MTEGTGAFRDTFEGSVTAAVIARGSVRHAGLGLPVVSPDGRFIAALEHAGGPASLDADAPLLGRGLGGVSLWVRAVEAEADRPAAPGGGGIDAAAVPVALQDASFPTFGPDGRLWSVSVGPGGDALLRYDPVDGSLRRLATGLKRIAFPSPDPTGRYVAVSGFGGNPEAATLFLVDVPAGRATPGPPPGSGGRGQVLPRWEAPGVVLFVELREGPDGAPSPAALRRWRVGESSAADVASLPVLPSVFDAGSLYAGVADPIGPGGRYLVFFDPAAEPPGLRRVDLATGGVEPVAAGGTAAASWDADRLVVAVQPASENRGLAKEAGLRLLELAPGNRGSVTLLPGDWAPLRVEPRAGGGAAILAVAPGERPDRLKLVQLFVVP
>NC_017080.1|WP_014436781.1|1647370_1650610_+|hypothetical-protein
MLQRSPNPLSCLRRLVLAGALAAAVPPHARAQPADGEPAEAQAAAVRGEAAEEGAAAGGGPASAAGEPPAAGGGREEEQEEQDDGRVAVSFRDVELSEIARFYLDRLKKPALIDEEVKDTRVTILANEKMPVADAMELIGNALRARGVLVAEGANQVEFLPLSAVGRIDRRRVGPAQSVDALENQAEIVDKTFELKHYDVARLRDVMVPLLPEYALVFADPNSRRLTVTAAAADLGRVERLVERLDVPQADGVIERIFKIQQGDASAIVSTVRLIISGSLGVEATGLMDDGGGASSRDGGRNRDNRSGRDAEAGPNVVSIERGESPILLRADVGRNWVIAVAEPRVMEQIQRWVEELDQPPADEGQDRPYVLIDVEHADIDEVASQVQEAVAAIPDDDLARSVRVIPFPKSRQLLVYGGQRGRNLVQSLLAELDVEASQYQLIREFSLQNGQADDVAAKIEALFGEEEDDNSWWRRRRGADDENKVKVSADAARNSVTVLTDPQRMERIAEMIHEQWDRPLDFGAVAPRVYTLKHSDPVQVQELLEGMFTTSSSTSRGSWWNRTTETTQAVGPLFGQFSFEALRGSDKLIVTAKSADSYVVIDELMAEIDQPQVAGLPVLIELKHANAEDVAEQLNATFAEAGTLAQLPRTERGLTRSLRTSTRTTQSPNLVGGGNNNRNNNQNQQNNNNANNDPGQIRFWWSQSRPRVDEQPTSNLIGKPRFVPVNRRNAIMVLAPRAYLQPLRDLIAELDLPGSQVVINAIITEVIHDDVSTLGVRFASDPAIFNDSRLQDQSLGGGVNVDFNETFGSGRGILGANLNLNLLLQLLIRKVDLRILNEPRVYTADNQEAHFFDGQDVPTVVSELVRGDSDGNVTRGFEYQPVGTRLHVRPHITQEGDIDLEVNLELSRIEAGETVFGNFIFNRRETTTQVTLQDGQTVVISGIVRQEDFEDVRKLPLLGDIPLVGGLFRNTDRGIRNREVIAFITPRIINPAGDEAELLSERNAQWLERIRGAMSGDEPENRDARTMPLDDLRSRPVPVPDPDSPSTPSLDEADGFRAPEPTRVDIPADDEDASQVRR
>NC_017080.1|WP_014436780.1|1646803_1647340_+|hypothetical-protein
MSRDTRNALLRAALVLVFGFAAVLLVLAFQRHDAAGGLEEDLADLTAALEEKAAADPAGEDDLGERVGERMRQRFVFGSAPEDRFRSVRGVLGDRVFFEGGESVRVGESFDGAEVLGVGAESVRFRHEGEEVTIDVGGGGGGGASGGFGGFSGGPSGFGGFPGGDRPRGSGNPRRPRS
>NC_017080.1|WP_053230099.1|1663461_1664133_-|hypothetical-protein
MLWPRGSKLPTARGPRGPRRLLLASALLVGGCGDAPQVRVYEAPADGVPAPAAAPPAAPPLAAAAAESGGLHWQTPAGYRDTGESNQFRTATLKGDSTGAGEEVEVAISRVPGQAGGIAANVNRWRGQLGLPPVDRGAVIAAVSPAPTGEGGLPGMVVTLANADATPPAAQRIAWFVLDDATWYVKATGTPAAIERETPALDRFLASLRPADAAPADAAAPSP
>NC_017080.1|WP_014436792.1|1664346_1664754_+|CrcB-family-protein
MAGSSERWLTLGLIAVAGGAGALSRYGFTLALGRLHGAEATVRPLATLGVNATGCLAFGFFWAAAAGRGDAWSIGRVAVLTGFLGAFTTFSTFGFEVASLLRAGRPAAALAVVAAQNAIGIAMAWAGIWLGTRAI
>NC_017080.1|WP_014436793.1|1664763_1666737_-|hypothetical-protein
MLRWFRKYNKFILVIGCAVLMVAFLIPQAIQQFSPKPGDRVVGSIGDEGVTSSELAAASRGLEILQRLGLGGLANYEREQWFLMLRDAEAAGLGASDVEVSQALASRGIDPNTDAAAEAAERLGLRVDDLRSVMRDFLVAERYRMLASGHRFDSTGATLSSSPGLVALQMLNEAQNFLRSEQAQQFGPAFQRQLEQQFANSIGGTGRLSPPFVEAVLHDEAERVSGRLAVLEPEVDDAARAGVSEAQLQRLFAEYSSFLPGRGSPYPFGYRVPDRVSLEALSVPMQAVRDTVEVGTVDVLEAFRRDNPGATPTEAQRLEVESRLLERRADAKLRDAANLLRGELEAARRGIPTAPDGRLELGPGVAYNAPALEELAELVRASTGVEPRLTRRTDRLIPVEDAAALEGLATAGLPELRLPFASLLMELPAFGPEAPADPAAAGDELLPEVSLVPVQVGVAMPLLTDFRDGSLHLVRITAADAAHEPESLEAVREEVASDAARVSAYESLLGRRDALLAQAASDGIDALDARSIVDAPPFPRRTRRTLDGRPAAPTLPEAGRAPALVDAAFEAVAGLPADADVEALPAAERLVAAGIDGRMALGILRIDALERPTRADLRSAVASGVLTGLDRVLIAEEDEDPVSEAALRERLGFTDEG
>NC_017080.1|WP_014436794.1|1666892_1667738_-|thiazole-synthase
MSDTQTLPADRPLRAGFHGFASRLIVGTGKYDTFERMAAALDASGCDVVTVAVRRERLVNEAGASLLDHLDLGRYTVLPNTAGCFDADDAVRVARLGRELLDQLDHPGKDWVKLEVLSDKKTLLPDPVGTLRATEQLVADGFAVLVYTSDDPVMANRLKAAGAAAVMPAGSPIGSGQGVLNRNAIAIILEMLKDGDPGYPVIVDAGVGCASDVAVAMELGADGVLLNTAIAHAADPVRMARAMRDATAAGRNSYLAGRIPRRLYATASSPWDGVISYVPGE
>NC_017080.1|WP_014436795.1|1667743_1667944_-|sulfur-carrier-protein-ThiS
MPRLTVNGTPRDSRAATLADLVADLGLAGKPVAAERNGAVVPKREHAETALAENDTIELVTLVGGG
>NC_017080.1|WP_014436796.1|1667990_1668737_+|methyltransferase-domain-containing-protein
MNAAADTTEQPTEEGRRRRAIAEKLHKKMEEQSTGKLYDLWAGVYDHTFGALVHRRQTRAIQELRAKPGERVLDLGVGTGLSLVKYPAGTEVVGVDLSMGMLDKARNRLRECASRGRGSVTLAQADAMNTPFADGSFDHVMISHVISVVSDPNRLLQEAKRILKPGGRIVVLNHFQSASPALALAEGVLNPVFVKIGWRSDLTLEECIAGLNLGVKYHFKLSAVDFWQIVVLGDAGSPTGTAREEESR
>NC_017080.1|WP_014436797.1|1668803_1669685_-|hypothetical-protein
MSDNPARDAAVEPADRRRSVDADPLPRFRPARLDRELGFDALLRRSTFGLVVVLVALASVGFGGPLFGLFAGICVVAAWLGFGFLNARAATSARALLPLVQQRPPLFRESEAALRELLGRRALLGWVRLSIYQVWATIRHAQGRHAEAADLCASVLARPMGPAEAARPDVLLMLVESLLETGRPAEAWGPLVALAGLELKLPQSMQRLILQLRYELAIGQPAAALVNLRQRVALAELLPARACGEVHAMLAQAAEATGRSDQAAWLRARAELLGWDGGVAAAPDERAREQARA
>NC_017080.1|WP_014436798.1|1669681_1670686_-|hypothetical-protein
MTRNPHEKGAAPRTTLPDADGLRERLEETQPHPVPASRRALPIAAVGLALLAALAGPPLIGTLAPWLVLGGIALLAVRRARQSRRVGEGLEQAETLLRTRRPAAAYHAADAWLDDTVHEPAASAGCLHVMAQALQTLRHQEATLVATEALLERLPPHHPARASALLHRSIAEFESDRLADGDATLGRLRGLLEKREPVEPVEPAGEDPQAGHAGDDRRVGRPFPPADRAAEEHAHAAVRVAQLVQSVSTWHAADAVADAESAGGAVAAFRPLGVDAGFAHGLLAWCHLKLHRAEDAAAAWAVATRLIPAPALVHRFPRLAEVAERCPATGGLPT
>NC_017080.1|WP_014436799.1|1670727_1671222_+|dihydrofolate-reductase
MPIHLIYARSLDHCIGRDGGLPWRLPADFRHFKRTTLGHPIVMGRKTYGDHQSVLPGRTNVVLSRDPGFRGADGIVVRHDLEAALDEYGAGGRLAFVIGGAGVFSAAFPRAEAVIETIVRTEVPEGDVRVEAFDFAGWRSEKILEHGADERHAFAFEVWERKRP
>NC_017080.1|WP_014436800.1|1671456_1673250_+|DNA-polymerase/3'-5'-exonuclease-PolX
MPSTNASLTAVFEDMARLTEVLGGNGFKVNAFVKAARVVEALERDAASFSRSELVALPGVGTGTADRILEFVESGAVADHEDLKERVPAGVVALMGISGIGPKSAARFWHEAEVESIDDLKAAIDDGRLAALKGFGQKKIDGIAKSLAFAERFGDRHRRGVAAALAGAVAEAVAGVEGVRRVEAAGSLRRGAETIGDVDVLAAVPGPGPSAEDPTPAPDPGVTAAVFDAVEKLDGVEEVLVRGDTKLSVRFGAGLQADVRAVPAACFGAALAYFTGSKEHNVALRERAGKRGMSLSEYALTDKRGGAVVASATEAEIHGALGLAFVPPELREDRGEVQRAEAAHDAGEPLPRLVETADLKAELHAHTTASDGVMSIDELVEAALARGFHSVAVTDHSRSQVQANGLSAGRLEKHIEAVRDAAKRWKKQISVLAGSEVDILADGTMDYPDDLLAELDVVVASPHAALAQEPEAATRRLLRAIENPHVTVMGHLTGRLVLKREGLSPDMPAIVKAAADRGVALEINASPYRLDLRDRHAALALEAGVRLAINTDAHGPDNFLNAVHGVATARRAGAQARDVVNTFGREELAAWIRSTKR

Crispr_ID: NC_017080_10

• CRISPR_ID: NC_017080_10
• CRISPR_location: 1996365-1996456
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_017080_10

Consensus_repeat	Method
GCCGGATCCGCCGGGGCCTGGACACTGCGCCTC	CRISPRCasFinder

spacers of NC_017080_10

>10.1|1996398|26|NC_017080|CRISPRCasFinder
TGGACATTGGGATCCGCCGGGGATCC

CRISPR arrays and Neighbor proteins around NC_017080_10

CRISPR arrays

The CRISPR arrays of NC_017080_10

>merge|NC_017080|10|1996365-1996456|CRISPRCasFinder
GCCGGATCCGCCGGGGCCTGGACACTGCGCCTCTGGACATTGGGATCCGCCGGGGATCCGCCGGATCCGCCGGGGCCTGGACACTGCGCCTC

>NC_017080|10|9|1996365-1996456|CRISPRCasFinder
GCCGGATCCGCCGGGGCCTGGACACTGCGCCTC	TGGACATTGGGATCCGCCGGGGATCC
GCCGGATCCGCCGGGGCCTGGACACTGCGCCTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_017080.1|WP_154661816.1|1989578_1989719_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014437073.1|2000412_2000691_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014437064.1|1989929_1990202_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014437079.1|2005230_2005950_+|riboflavin-synthase	unknown	unknown	gnl|CDD|293928
NC_017080.1|WP_014437059.1|1981787_1984196_-|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl|CDD|273429
NC_017080.1|WP_014437078.1|2003998_2004862_-|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|223528
NC_017080.1|WP_014437061.1|1984517_1986257_+|DNA-repair-protein-RecN	unknown	unknown	gnl|CDD|223571
NC_017080.1|WP_014437076.1|2001865_2002438_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_017080.1|WP_014437058.1|1980895_1981594_-|phosphoribosylanthranilate-isomerase	unknown	unknown	gnl|CDD|238237
NC_017080.1|WP_014437057.1|1980557_1980899_-|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl|CDD|224278
NC_017080.1|WP_014437071.1|1999770_1999959_-|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl|CDD|350229
NC_017080.1|WP_014437077.1|2002447_2003719_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014437066.1|1992711_1996188_-|class-I-SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl|CDD|223934
NC_017080.1|WP_014437070.1|1998391_1999690_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014437075.1|2001131_2001869_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312
NC_017080.1|WP_014437062.1|1986592_1989019_-|hypothetical-protein	unknown	unknown	gnl|CDD|271213
NC_017080.1|WP_041378034.1|1999999_2000386_-|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl|CDD|350229
NC_017080.1|WP_014437068.1|1997058_1997742_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_154661815.1|1979277_1980426_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014437065.1|1990188_1992666_-|ATP-binding-protein	unknown	unknown	gnl|CDD|379114

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_017080.1|WP_014437071.1|1999770_1999959_-|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl|CDD|350229	cd09881, PIN_VapC4-5_FitB-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4 and VapC5, and Neisseria gonorrhoeae FitB and related proteins. This family includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This family belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.42197e-23
NC_017080.1|WP_014437076.1|2001865_2002438_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	2.64536e-31
NC_017080.1|WP_014437079.1|2005230_2005950_+|riboflavin-synthase	gnl|CDD|293928	cd00402, Riboflavin_synthase_like, Riboflavin synthase and similar proteins. Riboflavin synthase catalyzes the dismutation of two molecules of 6,7-dimethyl-8-(1'-D-ribityl)-lumazine (DMRL) to yield riboflavin (vitamin B12) and 4-ribitylamino-5-amino-2,6-dihydroxypyrimidine (RAADP). Riboflavin synthase is a homotrimer and the catalysis does not require any cofactors. Active sites are located between pairs of monomers, but only one active site catalyzes a reaction, the other two sites are inactive. Humans do not produce riboflavin synthase, and thus it is a good target for antimicrobial agents. This family also include lumazine protein (LumP) from bioluminescent bacteria. LumP serves as an optical transponder in bioluminescence emission.	2.74252e-81
NC_017080.1|WP_014437059.1|1981787_1984196_-|UvrD-helicase-domain-containing-protein	gnl|CDD|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NC_017080.1|WP_014437062.1|1986592_1989019_-|hypothetical-protein	gnl|CDD|271213	cd14254, Dockerin_II, Type II dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type II dockerins, which are responsible for mediating attachment of the cellulosome complex to the bacterial cell wall.	0.000406438
NC_017080.1|WP_014437075.1|2001131_2001869_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.16204e-13
NC_017080.1|WP_014437066.1|1992711_1996188_-|class-I-SAM-dependent-DNA-methyltransferase	gnl|CDD|223934	COG1002, COG1002, Type II restriction enzyme, methylase subunits [Defense mechanisms].	1.58404e-06
NC_017080.1|WP_014437078.1|2003998_2004862_-|NAD(P)-dependent-oxidoreductase	gnl|CDD|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	2.26114e-25
NC_017080.1|WP_014437057.1|1980557_1980899_-|antibiotic-biosynthesis-monooxygenase	gnl|CDD|224278	COG1359, COG1359, Uncharacterized conserved protein [Function unknown].	3.29746e-12
NC_017080.1|WP_014437061.1|1984517_1986257_+|DNA-repair-protein-RecN	gnl|CDD|223571	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair].	7.96426e-164
NC_017080.1|WP_041378034.1|1999999_2000386_-|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl|CDD|350229	cd09881, PIN_VapC4-5_FitB-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4 and VapC5, and Neisseria gonorrhoeae FitB and related proteins. This family includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This family belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.53338e-37
NC_017080.1|WP_014437058.1|1980895_1981594_-|phosphoribosylanthranilate-isomerase	gnl|CDD|238237	cd00405, PRAI, Phosphoribosylanthranilate isomerase (PRAI) catalyzes the fourth step of the tryptophan biosynthesis, the conversion of N-(5'- phosphoribosyl)-anthranilate (PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose 5-phosphate (CdRP). Most PRAIs are monomeric, monofunctional and thermolabile, but in some thermophile organisms PRAI is dimeric for reasons of stability and in others it is fused to other components of the tryptophan biosynthesis pathway to form multifunctional enzymes.	7.31729e-69
NC_017080.1|WP_014437065.1|1990188_1992666_-|ATP-binding-protein	gnl|CDD|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	1.07697e-13

Protein sequences

>NC_017080.1|WP_014437066.1|1992711_1996188_-|class-I-SAM-dependent-DNA-methyltransferase
MPGTDAAATDFIARWAKSEGSERGNYQTFLSELCDLLGVPRPEPAVADDAENAYVFDRTVTSRDGKGGAAPGFIDLYKRDCFILEAKQGSETPAAKSDDDLADTALKPRKTRLGTARRGTAKWDQAMLAARGQAERYARSLPPEEGNPPLLITCDIGHTFELYSDFSRLGRTYTPFPDPSSHRIRFEQLADEKTRQLLATAWTDPLDLDPAKRSAKVTRDIAARLAKLSRSLEKTGQNAEVVAHFLMRVLFTLFAEDIDLIPKESFTSFLKRIEHKPELFAPLVESLWKEMNTGGVSAALEAPVLRFNGGLFAECHAIPLDADQLKLLIDAAEQDWSDVEPAIFGTLLERALDPRERHKLGAHYTPRAYVERLVLPTVIEPLRERWSNAQAAALTLDRLGKPKQARRAVDDFLHELCNTTVLDPACGSGNFLYVTLEHMKRLEAEVRQTLFDLGGQTPLELESAGITVDPHLLKGIELNPRAAAIADLVLWIGHLQWHHRTHRGTTPSEPILQAFANIENRDAVLAYDEKKLVTDEQGQPVTRWDGRTTKKHPVTGEDVPDETAREVTYTYVNPRKAEWPEADFVVGNPPFIGDKKMRAALGSGYVDALRATYSDYGNGLDFVLYWWLRCAEAVKAEKLRAFGLITTNSISQPFNRRIISTLVGPDHEIGYAFAISDHPWTDEAGAAAVRVAMTVVDRRTGDGVLSTTEAGEDLQQTTGSINAGLTIGVSKSSAVQLKANQGLACPGVQLSGMGFVVEEADLDQFPAATREALIRRYINGRDLMQVPTGRYVLDASGETDETLQDGHPEAYQWIVERVKPDRDQNTRKKYRREWWIFAEPRLKFRRALAGLPRWIGTCRTAKHRVFAFADESTLPDAKVVAIADQRASTLGILSSVIHTNFATWIGGWLGVGNDSTYNHADCLNRFPFPDKEKDQLDQVAAVAERLDTHRKRQQAAHPKLTLTNVYNVLEKLRSGEPLTAKEKLTHEQGLVSVLKQLHDDLDAAVFAAYGWSDLWNRHQRGDDIDEPLLERLVALNAERAAEEATGHVRWLRPDFQNPQGKEATTEQQTTLDLPDAPAPKKPSGKKLRWPDTLPAQTAILRDLLTASPTPLTPEALAASFPTAKTRLAQITEICETLTSLGLATKGDADLSGQVKFAA
>NC_017080.1|WP_014437065.1|1990188_1992666_-|ATP-binding-protein
MPEHNEAEIDGRAGDSPILLKAIYVRFYKSFNFDYLKKSQTSARPRAWEMFRDEWFPHVRISLEKEITTIVGANESGKSQLLRAIEIALSGDGIKHEDFCRYSPFFSAKTGMMAKPEFGVEMHNANELEAQYFGKKQEASSTRSGRIYFFTGQGAGLDLYRAGEDGFEEVKLDAKKAASFRKLLPRTIRLREQAELPDTLSVRFLVDGEAEQVPSRLTRESRRLIEAEGEGAKLALAAYDASKKTSPAAAIPAAVKNLVDAIQYEERSKEADMRLARDLLLKAAGIDAKAFGEVMRSVEGNKEGYADGVMSTINRELDECLDFPNVWAQDKDFRIELSLRETDLAFVIRDRTGTTYSFDERSSGLKHFLAYYAQYLTHVNPDGRPEVLLMDEPDAYLSASAQQDLLKILDDFSNGGLGRPKMQVLMVTHSPYLIDKNKAHAIRVVDKGAMAEGTRVVSNASRNHYEPLRSSIGAFTAETAFIGNCNLFVEGISDQVYIAGVNRVLASMMKDSLRQLNLNSMTIVPAGSASHIEYLLHLARGRDIEKPAALVLLDSDPEGKQVARALKRGGKGRAKIAEEFVMTIADVLNSQDHDEMESSSKTTASFTDIESLIDPLIAFCAAWSYFANFIDVARDNLLSSVPAAEDGDSRTLSFQEVYRAVARSGGEPERDLDKLGMAKEVVAVLECAEQPNGLDLDSDAFRSARSATLERFSKLITAIEWKRRVAVRLLNEERLDRRIKRECNSVAGRLKDPVSAGLLIQTLEAIEALLDDTAEADRYRAAILETRSTFKLNERSSDDALELTDVRASLTTLADAVHTSNDGME
>NC_017080.1|WP_014437064.1|1989929_1990202_-|hypothetical-protein
MEWNELFAGAWTPQPQRQPIDAAGDAGPWTALAHNTGRPFTDDSVPSGTQQVAYQVRAARGTRQSGWSEPGILRFVANAAADAAPLRIAA
>NC_017080.1|WP_154661816.1|1989578_1989719_-|hypothetical-protein
MPSGTQQVAYQVRAARGTRQSGWSEPGILRFVANAAADAAPLRIAA
>NC_017080.1|WP_014437062.1|1986592_1989019_-|hypothetical-protein
MPIDRRLLPLAAAFLQASFCIETAEAVTWTGWDDNSAAWNLNRNWGDQQYPRRAESSDLDQAAVFQAGIATERYQVDVNLAYTVDRVTFSGEAGEPGFDLRGDGRLGITDEIYLNHAARNRFYTRLDVVGGGAEDFGIWLSKPGVLGFERPVHSYDRGITIGFRRTAREPTLSGGAVFFNRNLIAPGQTVTVDLPETSRVHLRGSGNGFSELNIASGTVRLADNGRLSDGTRVRADGTFLVDEVDDRIASLSGTGVVDLAGSAAILTVGSHSNGATATTFSGDLGGSGTLVVDNAGYTLTLAGEDSRVGRLRVDAGELVVAGKLHSDLRTPVDAGAGMRVGGTLTSPEGVTLGTDATLGVSAGGLVDAAAGLSVAPDGSVEVGGTVRIGDGGSFILEEDASLEVQPGGRVEGGELLDLYDLAQVLVREGHLGVFAGGRVDVNPNASLTLIDSTADFGREVENFGQLLLVNAETTGDVLNDGGAILAAGVNDLGGGDLEQYNGGRLIVQFHDEPGAVLTTSGTATLAGGLELTASSPEAVPAPYERATVLAAGDLGGRFATVAQAPFEDGTALAVTYDAAGVHATRALIGDANLDGDVDVAEVFTGNGDAQILASNLGITGGAAWVDGDFSGDGDVDVAEVFTGTGDAQLLAGNLGATVGAASGAAASRSAGVFADAASAGVAAAAAAGTASGTYDPSTGEVVLSVGDGLGVVALGSRSGRLLDPGPVTPTPSQADDAVVAFFDAGGLRVGAYDLGPVVQPGTPASDLGLSFTPLGGTTTLTTLTVVPEPGAAGLLALATLVLRRRRVG
>NC_017080.1|WP_014437061.1|1984517_1986257_+|DNA-repair-protein-RecN
MLNQLHIQNLAVIEDATVDFAEGLNVFTGATGAGKSLVIGAFEALLGLRKATDMVRPGAKEARISGLFTLDDPRAAAEVGEALDQEIAAGEEFLLTRKLFASGRSSVSVNGQPATAAMLARAAESLVDIHGQHDHQHLFKPAHQLAILDGYAGTEALRDRFAAGFAELRSMKKKRDRLAASAELREQQRDLAQFQLDEIDAVEPQEGEFPELASRGAVLGNVQSLKADAARCYGALYEADGSINERLQGLTGILLDVAETDPSAAPIAEAVRSATMMLQEAAFDLSRYESRLETDPEEAAEVEARLNQLNRLIAKHGDGRSGRHVVGGEDPLQPVIDKRNQLAEQLEKLAAAETDAGGLDAQIEAAERALDELAGALTVKRKAAAAELAPAVAAQLAELGMVGATLDVGFDAADDTPSGRDRIEFLARTNPGQPERPLRAIASGGELSRVMLALKGVLHGGDRISVLVFDEVDANIGGRLGSVIGRKLRALADADAAEGPKPQVLCITHLAQIAAFGDKHFVIQKRTTGSKKTDSTATTVAAIDGKARVDELAEMLAGAEATPTTRKQARELLRVAERG
>NC_017080.1|WP_014437059.1|1981787_1984196_-|UvrD-helicase-domain-containing-protein
MPDAADVLPDFLSDEAHPKAAAAAPPEPATFKEASAGYRSAGVDHAAELTEGLTEPQAEAVAHVDGPLLVLAGPGSGKTRVITRRVAYLVRACGVPPWHVLAITFTNKAAGEMRERVAQLLTEKQARAATVSTFHALCARLIRQHAERVGLPPGYSIYDTADQKAAIKTALSELEINPKNFAPASMLAGISNAKNELLTPAAYQATASDFHKRTVAKVYAKYQQILVRNSAVDFDDLLMKTVELCSNHPDVLAELQDRFRYILVDEYQDTNRAQFMIADFLAKSHHNLMVTGDPDQSIYGWRGADIRNILDFETGYAEAKTIRLEQNYRSTKTILAAADALIANNARRKAKRLFTDNDDGGPVVVTKTYDQDQEAQFLAERLKHHHDAGTPWSDMAVFYRINSLSRSLEDALRDGAIPYQIARGTAFYDRKEVKDALAFLRAIANPADEVTHFRIINTPARGISAASVKAIRAHTLATDQPLNGALADPEKIAGLNNRAQVAVAKFHAMLEGWRQRAGLVATPGEGLLVPRRDADPSEQGSLADLVRDVIDRSGLDAFYRNDKSDPDQERLANLGELVTSVTQFEEQMELDRLEDDPDAEVPGLGEKLLGFLERVALVADADSIDAADGSVTLMTLHAAKGLEFPVVGMIALEDGLLPHQRAAEDEDEMEEERRLAFVGITRAERHLYLTSTKYRTVFGRTNPTVPSRFLDELPESAVERRDIADDALDGGGFTHRRGQAQRNRADREADAWPPGTEVRHPQFGRGRIRKVDSMGAHTRASVEFQTHGLKTMILQYARLERV
>NC_017080.1|WP_014437058.1|1980895_1981594_-|phosphoribosylanthranilate-isomerase
MTVRGFHAPAETPADRTRVKICGVRDVGTAAVCAEAGVDFVGLVFVRRSPRCVETAEAEGVTRALHAFGLHAPVPVGLFCDHAVEDVRAIAAAAGLTTVQLHGRESAAEVAALADAGLTVWKAVPFDADGVRRWAGVRGLAALLVDAPPPARGGVTGGHGVRFDWQALAGVDRGGLPPLWLAGGLTPENVAGAIGIVRPFGVDVSSGVESAKGVKDAAKVRAFVGAAGSVAG
>NC_017080.1|WP_014437057.1|1980557_1980899_-|antibiotic-biosynthesis-monooxygenase
MTENLLNLSPAARSGVWLIVDFFTDPAREAEAVALFTQHVEDGRHDAGNLAFFVMKDQKEPGRFTSVECWEDEAAIQNHDAQPHHPVFLAELAKLQTREKEVRFLGFVATGDA
>NC_017080.1|WP_154661815.1|1979277_1980426_+|hypothetical-protein
MEPSTHDTNPSVTPGGGTHATPATASGSVAAAHGSSQRDLHDVPPAKRTRVSWGAIFAGAVVAVAITLLLTLLGVGGGLLTSDAITGADGLGLFAAIWYVISGTCGLLAGGYVAGRLAGSPSPRDAVLHGLTAWGLTTVFAAWLATSLAASLISGATSLAGTAVQATGTAVGGVASGVGSATGQVAGGALSAAGGALGAIDQIPLPDVDWSKYGSMANDLIEKTGADPAQTADEMGDQPVAAAKDFAANVRKWVEGEDSVTQEELIQVVTSNSGVSEAEARKGLDEINSAYTTAKTEATEAYETAKAEASDAYGAAEDRATQAYQTAKTEATEAAQTAYEEGTDALGTAALASFAVLLLGALAASFGASLGRPDEDEFRTRG
>NC_017080.1|WP_014437068.1|1997058_1997742_+|hypothetical-protein
MATTPENAYPTTRLLQIQFGEDRAATIQAQADELGVPKSEADRYADEVQAAAEANTAYRLAQQRARDLGETARAAAARMNRTAASVIANVRARAEISADPAAVYAIASIAARQAPTPQGPPAAPTAVTCTLGSDGVTTITWAGSTQGTTFTVERELLMADGTTVPFAAFAGPTGRPIQDGTVPVGTATARYRVKAFRGNQSSAWSTPGVLQLVNNETLAANNLRLAA
>NC_017080.1|WP_014437070.1|1998391_1999690_+|hypothetical-protein
MIADLLRAEKLVRQAVLDQVTSESVFIRLLQRAAPDVPREVIEAAVPLLLAGQQVHVDDEHDQLITAIQVLTEERLARALDRAVSRSQRRATRALHEHFEAEMLPAWLSSFDADRVRSRRRLEKARRQHRKIVMTFWSDPLDRFDLLVELFRSIPSFMEAEDAHDPDSAPVDDARDPKATAIAQIHARGTRVVGEIALLLRGGFADGAFARWRAFHELAVIATFLSAGDADLSEAYLDHRVVGHNRKARSLAEHGEQMGEEPLDAEHFEQVEAAYVAAVERYGKPFKQQYGWANAHLKTEKRVTFEQIEKAAGLTPWRLWTNAASDSVHAGSEGCFYSFGGHEPGEVPETEAIDGLNVAGCKACESIRIFGAATLTSRTAFPRFAVYRILAAVAADCHNAFEVAAETLAEHWVSPEELPAELAAELRRMSGD
>NC_017080.1|WP_014437071.1|1999770_1999959_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MAEQWARVNAPLRRAGTPIGPFDAAIAATALVHGCTVVTHNRKHFDLVPGLAVEDWEAEEAA
>NC_017080.1|WP_041378034.1|1999999_2000386_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MYSFRHPRSALASRLSAAYVADGIVLSEIVKAELLQGARLAKDPERDLERMRSLFALYPSHPFDEPVAEQWARVNAPLRRAGTPIGPFDAAIAATALVHGCTVVTHNWKHFDLVPGLAVEDWEAEEAA
>NC_017080.1|WP_014437073.1|2000412_2000691_-|hypothetical-protein
MSTLHLRASVENGRLVTPLPPELADTATDGTTFDIHVELPGPDEQDPPLPKPSDGPEAFLRYLESLTSLGDIVLPPNDDVPDSPRRAHGEVD
>NC_017080.1|WP_014437075.1|2001131_2001869_-|class-I-SAM-dependent-methyltransferase
MTTPRLYADLAHLWPALSPPEDYAAEAAELERLLAERLGHDHLKLVEFGAGGGCTLAHLSAGGTRGGRHDVTAVDLSPEMLAVAASHAPGPPGLRTVAADMRTVRLPDAGTFDAVLAHDAADYLLTEADLLATARSAAALLRSGGVALFAPTHTAETFEPGEAGDKTDDGTAYTTRVNRTADRRVRMTISLTVRGAGGTRSIDDAHELGLFPAATWLHALRSAGLHAEPVESDGPWSMFVGQKPS
>NC_017080.1|WP_014437076.1|2001865_2002438_-|Uma2-family-endonuclease
MEAQRTDLPRMTPAEFFAFAEKQEGRYEFRAGEVVAMSGGTARHARLASRLQGLLFAGLRGTPCSAFTSELHLAIEAADRYVHPDNTVVCGPLQFAGGDADGRAVTNARVVIEVLSDSTEAHDRGEKFDLYRQIPTFEEYILVSRHEPDVQSFLRQDDGTWNLAFSRGLDAVATIRCLPLELPLAELYAE
>NC_017080.1|WP_014437077.1|2002447_2003719_-|hypothetical-protein
MRLALLCLLLALPAAAAPPELLLRTPPWELREGDAAAALGPTLERVRAADRAAVDAWVERPEGEGPLGPRALDEAAEALELTGFAHPADPLADRPDPDLEPLRTLGRLLAAEGVRRGREAGWSAATPPLRAAVRLGHRLGEAQGLTRVLVGLAVQQRVVQALEALAEEPGLPHLHATLADLTHQRIDVLPAAWTQLARPALNDPLIQQARDAVDAPGELANADWDELLHRLVLALAVGFEPDPEKPDEPLPPLPPAAEAALAAFGPAFEAVAPPGVQPRARRLIEGVLAEWDRLRGEAWADTLVPYHVLRAQPPRVPGPGLPERLLLPLIASPLPALAAAADLDRRMAALQGAEALREHAARAGRFPETLAEVDPPVPDDPFTGGPPGYAVSADGRSATLRQEPLPGDAPGRAHTHRVEVQAD
>NC_017080.1|WP_014437078.1|2003998_2004862_-|NAD(P)-dependent-oxidoreductase
MADSFTLFDKPLDPLPDRPRVLVTGAGGTIGGDFAAFHRDRFDLRLMVFHESEAAERDLSRFGEVVEADLTKPETLDAACAGCVAAVHLAGEPSPSATWPVLERVNIEGTYNLMVAAKRAGMQRVVQASSIHAVSGYPAGRQVQADDPVNPGDLYGVSKCFDEAMGRYMAEQEGLSVIAVRICAYQPRELAEGDGGLKLLDSFVSDRDLCELLALCVEDRRLRFAVVHGNGNNRFNRLDITETRELLGYAPRDAATEINDQAAAVAEAVIEHDVDGGGQESGIREDV
>NC_017080.1|WP_014437079.1|2005230_2005950_+|riboflavin-synthase
MFTGLIQHVGHVRSADRDPAGLRLVVVRGGWTPAADPVRGDSVAVSGVCLTVEEATPETLTFRVIGQTLAVTKLGRLGPGDRVNLECAVTASQPLGGHFVQGHADGLGEVAAIQTDAGDWRVRVDVPGGFARHLVDRGSVAVDGVSLTLAEVHDGPAGFTVCLIPETLEMTTLGSLAVGDPVHLEADVLVKAVNARVEAMLGGQKQERPVTRGMLLDAGFASSAGSPSGAMSGAGRDRG

Crispr_ID: NC_017080_11

• CRISPR_ID: NC_017080_11
• CRISPR_location: 2506120-2506198
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_017080_11

Consensus_repeat	Method
CGCTCCCGGTCGGCGCAGCCGACG	CRISPRCasFinder

spacers of NC_017080_11

>11.1|2506144|31|NC_017080|CRISPRCasFinder
TGTTGCCTGACTTCTTCGCTTCTTCGCTTCT

CRISPR arrays and Neighbor proteins around NC_017080_11

CRISPR arrays

The CRISPR arrays of NC_017080_11

>merge|NC_017080|11|2506120-2506198|CRISPRCasFinder
CGCTCCCGGTCGGCGCAGCCGACGTGTTGCCTGACTTCTTCGCTTCTTCGCTTCTTCGCTCCGGTCGGCGCAGCCGACG

>NC_017080|11|10|2506120-2506198|CRISPRCasFinder
CGCTCCCGGTCGGCGCAGCCGACG	TGTTGCCTGACTTCTTCGCTTCTTCGCTTCT
TCGCTCCGGTCGGCGCAGCCGACG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_017080.1|WP_014437505.1|2512758_2513379_+|inorganic-pyrophosphatase	unknown	unknown	gnl|CDD|179080
NC_017080.1|WP_014437491.1|2491695_2493921_-|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|223715
NC_017080.1|WP_014437490.1|2491153_2491627_-|response-regulator	unknown	unknown	gnl|CDD|381108
NC_017080.1|WP_014437500.1|2507112_2508783_+|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl|CDD|236992
NC_017080.1|WP_014437489.1|2489620_2491090_+|family-10-glycosylhydrolase	unknown	unknown	gnl|CDD|251441
NC_017080.1|WP_083855279.1|2512098_2512467_-|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl|CDD|223427
NC_017080.1|WP_014437506.1|2513479_2514352_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|187613
NC_017080.1|WP_014437496.1|2503342_2503702_+|DUF86-domain-containing-protein	unknown	unknown	gnl|CDD|225236
NC_017080.1|WP_083855149.1|2501423_2502803_-|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase	unknown	unknown	gnl|CDD|273555
NC_017080.1|WP_014437495.1|2503014_2503281_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014437502.1|2510100_2511225_+|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl|CDD|234742
NC_017080.1|WP_014437503.1|2511425_2512106_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014437498.1|2505090_2505885_+|phosphoadenylyl-sulfate-reductase	unknown	unknown	gnl|CDD|234997
NC_017080.1|WP_154661858.1|2515340_2515922_-|pantetheine-phosphate-adenylyltransferase	unknown	unknown	gnl|CDD|234674
NC_017080.1|WP_014437501.1|2508937_2509969_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014437499.1|2506204_2506909_+|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133022
NC_017080.1|WP_014437507.1|2514546_2515212_-|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293797
NC_017080.1|WP_154661955.1|2503723_2505013_-|alkaline-phosphatase-family-protein	unknown	unknown	gnl|CDD|366747
NC_017080.1|WP_014437493.1|2497999_2501113_-|beta-galactosidase	unknown	unknown	gnl|CDD|236673
NC_017080.1|WP_154661857.1|2493923_2497925_-|hypothetical-protein	unknown	unknown	gnl|CDD|224588

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_017080.1|WP_014437505.1|2512758_2513379_+|inorganic-pyrophosphatase	gnl|CDD|179080	PRK00642, PRK00642, inorganic pyrophosphatase; Provisional.	3.03727e-107
NC_017080.1|WP_014437502.1|2510100_2511225_+|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl|CDD|234742	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT.	8.76566e-145
NC_017080.1|WP_014437490.1|2491153_2491627_-|response-regulator	gnl|CDD|381108	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains. This family is composed of response regulators (RRs) that are members of phytochrome-associated, light-sensing two-component signal transduction pathways such as Synechocystis sp. Rcp1, Tolypothrix sp. RcpA, and Agrobacterium tumefaciens bacteriophytochrome response regulator AtBRR. They are stand-alone RRs containing only a REC domain with no output/effector domain. The REC domain itself functions as an effector domain. Also included in this family us Methanosaeta harundinacea methanogenesis regulatory protein FilR2, also a stand-alone RR. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	6.81691e-47
NC_017080.1|WP_014437500.1|2507112_2508783_+|energy-dependent-translational-throttle-protein-EttA	gnl|CDD|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
NC_017080.1|WP_014437489.1|2489620_2491090_+|family-10-glycosylhydrolase	gnl|CDD|251441	pfam02638, GHL10, Glycosyl hydrolase-like 10. This is family of bacterial glycosyl-hydrolase-like proteins falling into the family GHL10 as described above,.	3.2413e-46
NC_017080.1|WP_083855279.1|2512098_2512467_-|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl|CDD|223427	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	2.07666e-40
NC_017080.1|WP_014437506.1|2513479_2514352_+|SDR-family-oxidoreductase	gnl|CDD|187613	cd05355, SDR_c1, classical (c) SDR, subgroup 1. These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	6.86514e-134
NC_017080.1|WP_014437496.1|2503342_2503702_+|DUF86-domain-containing-protein	gnl|CDD|225236	COG2361, COG2361, Uncharacterized conserved protein [Function unknown].	1.78297e-13
NC_017080.1|WP_083855149.1|2501423_2502803_-|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase	gnl|CDD|273555	TIGR01326, Includes:_O-acetylhomoserine_sulfhydrylase, OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities. [Amino acid biosynthesis, Aspartate family, Amino acid biosynthesis, Serine family].	0
NC_017080.1|WP_014437491.1|2491695_2493921_-|PAS-domain-containing-protein	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.24497e-44
NC_017080.1|WP_014437498.1|2505090_2505885_+|phosphoadenylyl-sulfate-reductase	gnl|CDD|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.04777e-110
NC_017080.1|WP_154661858.1|2515340_2515922_-|pantetheine-phosphate-adenylyltransferase	gnl|CDD|234674	PRK00168, coaD, phosphopantetheine adenylyltransferase; Provisional.	7.18427e-74
NC_017080.1|WP_014437499.1|2506204_2506909_+|glycosyltransferase-family-2-protein	gnl|CDD|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	4.69751e-56
NC_017080.1|WP_014437507.1|2514546_2515212_-|MBL-fold-metallo-hydrolase	gnl|CDD|293797	cd07711, MBLAC1-like_MBL-fold, uncharacterized human metallo-beta-lactamase domain-containing protein 1 and related proteins; MBL-fold metallo hydrolase domain. Includes the MBL-fold metallo hydrolase domain of uncharacterized human MBLAC1 and related proteins. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	3.70467e-25
NC_017080.1|WP_154661955.1|2503723_2505013_-|alkaline-phosphatase-family-protein	gnl|CDD|366747	pfam01663, Phosphodiest, Type I phosphodiesterase / nucleotide pyrophosphatase. This family consists of phosphodiesterases, including human plasma-cell membrane glycoprotein PC-1 / alkaline phosphodiesterase i / nucleotide pyrophosphatase (nppase). These enzymes catalyze the cleavage of phosphodiester and phosphosulfate bonds in NAD, deoxynucleotides and nucleotide sugars. Also in this family is ATX an autotaxin, tumor cell motility-stimulating protein which exhibits type I phosphodiesterases activity. The alignment encompasses the active site. Also present with in this family is 60-kDa Ca2+-ATPase form F. odoratum.	1.07012e-45
NC_017080.1|WP_014437493.1|2497999_2501113_-|beta-galactosidase	gnl|CDD|236673	PRK10340, ebgA, cryptic beta-D-galactosidase subunit alpha; Reviewed.	0
NC_017080.1|WP_154661857.1|2493923_2497925_-|hypothetical-protein	gnl|CDD|224588	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning].	6.56515e-27

Protein sequences

>NC_017080.1|WP_014437498.1|2505090_2505885_+|phosphoadenylyl-sulfate-reductase
MAAAPRSITDAPEPPAARVDAAPQADIDLDRADAHLRKVSAHDIVAWAADAFPAGSLALTTSFGVQAAVMLHLVNDVIPGIPVVFIDTGFHFNETYRFADELTTRLKLDLRVYQPALSPAWFHARHPGLHERDPDAYDRARKVEPMDRALAEIDPAATFAGLRRDQTQNRQAMQHVIFQNGRHKVLPILRWSTKDVFQYLKAHDLPFHPLHDEGYASVGDWHSTRPIGDGEDERAGRFHGLKQECGLHLPSSEGEAASRASSSL
>NC_017080.1|WP_154661955.1|2503723_2505013_-|alkaline-phosphatase-family-protein
MLEVVGLSGSLLRHAPRLRAFAERAGQRELQPVFPAVTCSVQSTMLTGRPVGGPEGHGVVGNGWFDRRLAEIHFWKQSNRLVRGPSAWEEKTGHGPRGAVSCANLFWWFNMATTAGVAVTPRPQYRADGRKVPDVWTKPPGLRDELQRELGRFPLFRFWGPGSDITSTRWIAEATKRVVDRHDPTLTLAYLPHLDYVLQREGPGGTSVPAEVAAVDAVAGDLLDHLEERGRRVLVVSGYGVRAVDTPLYPNRILRDAGLLAVREEGGREVIDLHNSRAFAVCDHQVAHVYHQPGLELPAFPRTSPHPIDAEHAGDTVLEADEGCWFSYDFWPEGRDDLAPDYARTVAIHAKPGYDPRELFLGLSKPTLAWKILKRKLGFAQPLDVIPLDATLVKGCHGRAVAGEQGPVLLGAGDGPRLALERVRGLLLH
>NC_017080.1|WP_014437496.1|2503342_2503702_+|DUF86-domain-containing-protein
MQPEDARRLREIVDAGRRVQAYVGEEGAAVALKSNQCRSPILYQLVVHGEAAAHVSEDTRAALAAVPWRAMKDFQNLLVHRYWSIHDPTLTHIVEVEMPPVLRAIEDHLTTLGDESTSG
>NC_017080.1|WP_014437495.1|2503014_2503281_+|hypothetical-protein
MAEPQNEPDRVIGVVPAWMQRWGVAEAWSFDAVGVGGDRDEHGVVVRFADGQPRGYYALCEAEADLADRLGIRVMMLTRGAVDDLVDR
>NC_017080.1|WP_083855149.1|2501423_2502803_-|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase
MSDTTTAPSPSSTDTSSAEGTPGGPPVPKPHGLGTLALHAGQEADPTTGSRAVPIYATTSYVFKDTEHAANLFGLSEFGNIYTRLMNPTNDVMEKRIAALDGGVTGLAFASGQAAITAACLTLAHSGQNIVSATSLYGGTWTLFTQTFKQLGIEVRFFDSDKPEDIHGLVDENTRFVYMESIGNPALGVPDFRAIADAAHSAPHGAIPVLCDNTSMTPLLLRPIEHGIDIVLYSTTKFIGGHGTHVGGCIVDSGNFKWTDDRDKWPEFCHPAPSYHGAIFADHLEAMGNIAFNVHVRTHQLRDTGAAMSPFAAFLFLQGLETLHLRMPRHSENALKLAEWLEKHDKVEWVNYPGLASHRDHANAKKYLPDGQGALLGFGIKGGMEAGKKLIESCKLCSHLANIGDAKTLVIHPASTTHSQLSEDEQKRTGVSPEYIRVSVGLEDADDVIADLEQALAAV
>NC_017080.1|WP_014437493.1|2497999_2501113_-|beta-galactosidase
MTTPPFDDLPAWIENPERFEHGRLPSRAHFVPCATAAEARAVDPLVESPEAASSRVVSLDGDWAFLLAPSPSEAPAGFEAEGFDDGGAGWGTLPVPSMWQMHGHGEPAYTNVNFPFPVIPPRVPVDNPTGCYRRRFALPPGWAGERVVLRFDGVDAAYHVWVNGREVGYSQGSRNAAEFDVTAALHAGRENLLAVRVVQWCDGTYLEDQDQWWLSGIFRGVSLLRRPAAGLADVTVAAEPAGPADGRSRGPAAVMVRGVTAAHAVRLSIEGPDGTALATAEATPAGGAFEHAFALDDAAYWTAETPRLLRLVVSAIADGEEVEAVAIRFGVRSILIEKPAGRLTINGRKIMFRGVNRHEWNPHRGRAVTWSDMVADVLLMKATGINAVRASHYPPHPRFFDLCDAHGLYAIDEADHETHGMMPAAGGWSALAEKPEWAAAHLDRVERMVKRDRNHPSVVIWSIGNEFGFGRHSVAMAQRARQLDPTRPVQAEPDRDLEAADVMAPMYAETEEIERFARGEGYRWSAYTGGVVLDAERTRGVPFYLCEYAHAMGNGPGGLADAWALFRAHENLHGGFVWEWRDHGIAIDARGGVDPTGQRTVGYAYGGDFGEPVHDGNFVADGLVFSDRTPSPGLVEHAAVVAPVGIDGGERDGAHRFAVVNRQDHADLSAFRFEWEREDAAGERTAGAAAVPPLLPGERAEVAVDAEAGGVVTLRAARREATAASEAGCWVGFGQSVGAAATWPAADRRDPPAGAPAARFAAEGSGLVAGPWRLDTLRGGLTLGGDRLAVSPGLNLWRAPIDNNWNGGGGGRLRERWETANTRRMRTTIDPPRVLEGGAAVELSGSTRAASYAYGFSFVQRFVPQAGGRLRLDVSGEPVGDWPEGITPPRLGLRCTVPLSLSGARWFGLGPLENYPDSRAAAWLGTHAATAEEMDTPYLFPQDAGNRGGLRWLRLGGAGGLGVDAPEHAPDFSFSLQRYDADHVTETTHRHELVADRRLHLNLDHAVRGLGSASCGPAMPEAYEVALEPFSFSLILG
>NC_017080.1|WP_154661857.1|2493923_2497925_-|hypothetical-protein
MNSPSRPLRSAGALLAELKEVVAAAARAWAEAEADGQRETAAVAARHRETSQRAQRRAKRARAAAAGHAETAAAAAEAAATEDEAGLRARAARARRRLQEQTDRRVSVLERELEHERWVAGSVYEGTSTDLKRQKAAAERAAAERQARRVAEKAATEQELKRLRFASVGRLAGSGGHEAEASADEDADTNTDADAADPWSATDAALARAEATRIRLQKLVLPELFVGPGPWLAAAGLAAVGAVGGAIATAERGDRLPGFLSGFAAAQGLSADLAAQALGAVLGGLLALMAAVAAGWPLRRAARRRVEVLAGEAAAARSASAAALSAGGRAVLERLKRKAREARAARDAAFAETQEKHGPQIERLKAANLERLGRLADAVRVRKQGVGSSAGRRQANAAAAAEAAAAGLAAREQKRQRVTDARRDRDAARAAGSADRRRIAVREDAVRGLHAVTAELDRLRDAADAACPPWEDGAWSGWSPPAACAGPVRLGTHEVDRAELLGGIDWPAGLPPLPERLAVPAVLGPVGSGEPRSLRVAAPAAERERAVGILRAAVLRWLTTQPPGRVRLTLLDPVGLGESFAALMHLADADPRLVGGRIWSEPRDLDAQLAELTEHVAVVIQDRLRNEHDDVEAFNAHAGPLAEPYRLLVVADYPHGFSPEAAARLENLAASGPRCGVFLALSRDTDEPLPAGCEGLPPSAVRDLELAQTPAYDGRAVEPEPAPSAARATSLVRAVGEAAKRADRVAVGFAEVAPAESERWTADATDRIEVPMGRSGAARLERFRLGEGVAQHALIAGKTGSGKSSLLHVLATNLCLCYPPEEVELYLIDFKKGVEFKPYGLHRLPHARAVAVESDRAFGLAILRKLDEQMDERGRLFRDAGVAGLAGYRAKSSESGGARMPRTLLIVDEFQELFAREDRIAQDAAALLDRLVRQGRAFGMHAVLGSQSLSGAAQLARGTLGQMAVRIALACNEADSQLILGDDNPAAGTLVRPGEAIHNDRGGEVEANRRFQVAWLPEGEQAEVLAGIRELAESRAGGKPAPGPVVFEGGAAADLGDNAELRRLREASPPDAGPAEPVFWVGEPIALSGPVAVRLERVRNGHIAAAGGGEGDRRDLLLNAAACLAPQFPPSAPADGLPPLWAVLGGGVDGLDERVRAAGPSGTRAVGGARAADALAAFHAELLRREAEGDAEEAAAVLALFGVERIRGLEPEEEAFALPSFDDEPGEAEAAEAVAPGAALADLVERGAACGLHLLLLADGADALESAVGRAGLRAFNTRVLFQMSSNDSAALTDATDAAGLGPLRGLVFREDRGTAVPFRPYRASATPLPASV
>NC_017080.1|WP_014437491.1|2491695_2493921_-|PAS-domain-containing-protein
MEGQDPGQNDGAATDRLAEAERRVRELERELDEARRRLAAERGAGPEETSVDRPAGGAGGGFSGEDALRFLAALPVVTWVKDAAGVHRYANPKLLERFGFAGRAGDVIGHPDSALGMAPDELKRVRGHDREVMQSNAAFQGVERVTAADGVSRAWLVVKFPFAAGSPEERVAGGFAVEVTAAMSRQEQLELALEAADGGTWTWEADPEGGKGYIDFSERCWAIRGKKPPPEASHPSEVQDEMHPDDLPGFESHLAAVLDNREPRLDRTVRLRHADGHWHWIRTVGEAVRRDADGKPLRMAGLHLDVHAAKTAERELAARARRLEGQLEEEGELRRESESRFMDLARRSPLMLWMSGIDAKTVWLNPELERFFGSGRSGIQGRRTLHRCILRLDRDRRGGDPAAGAGASEASAASRAPAAPAAPDAPSARASFEHEVQLTDATGATRWMLLYCRPRLTRDGRLIGHVGTAVDATDRHETRAALERSKLELEHQVAERTAELEDRLEELAGRNRELDQFAHVASHDLRSPLRTIIGFVGLLGPAVAHDEEARQHLERIQRAGGRMADLLDSLLAFASVGRGVLRTSAVDLDAVLVEVLEDLAAEITRLGADVRVEPLPQVIGDETMLRQAFQNLVHNAIKYAGDAPPTVRVRPEPGAPAGSVRIVVADRGVGFPPEAAERLFEPFSRFHPQSSPGSGVGLSIVRRVLSRHGSRVWAERDEGDEMPTRFLVELPAARRRGGSSR
>NC_017080.1|WP_014437490.1|2491153_2491627_-|response-regulator
MTQTYPKPAVEPPRPVVLLVDDNPDDRELARMAIASLQRPLDVVEAMDGLEALDLLRNRGADKRVSGPLPRPSLILLDVNMPRLDGKQFLRELRGDERYARLPVVMFTTSTAPWDVDESYAAGCNLYLVKPFAADELTRMLGDLFRLYLEFAELPSR
>NC_017080.1|WP_014437489.1|2489620_2491090_+|family-10-glycosylhydrolase
MFRLFRAPLLRPLFFGLLALAVVPLSPPASAAPREVRGTWLTTTGPDSIRSGLRTAATAAELRRVGINTVYGEAWKNGATQFASPTLAAFTGGIDRSLALGSRDLVEEVGIQAHRQGQLHYAWFEYGLAAQFVGSGGTPSNPLAKRARERGWLLQDASGRYANGSNGFAWMNPAVPEVRELIVGITLDSIRRHDLDGVQFDDRLAWPAEFGFDATTAALYREQTGRSLPARADDAAFRSWRQDQVTTLAREISRAVRAEAPGVRLSLSPSVTGFSDRAYNAPWTRWLEEGLFDEYVPQVYRADLAAYRQALTQNAAPFQAGGRLGDLVVGLRLNGSGADTELGVLRQQIVDAALLPGGGAAGHAIFYAKGVLENADALAAFYGGERDPPFFASDRRPPPRVASPDAADGLWRVEVAESMSYRVVAEIAGRWVEVDRRFLAAGPASFAVPGATAVELLVDRRARHAVPEPAAAAVLLLAPALVARRRRAA
>NC_017080.1|WP_014437499.1|2506204_2506909_+|glycosyltransferase-family-2-protein
MPLLSILIPVFNEAATVKELLARLRAVELAVPREVLLIDDGSTDGTAAILAEAAAADPELRVITQPANRGKGAAVAAGIAASRGDWLLIQDADLEYAPSDIPRLLEPVLAGDADAVYGSRFVGGQRRRVNRFWHTQANRCLTTLCNAVTDLALTDMECCYKLLPGELARSWTLQEAGFGIEPEITCRLAREPRLAIFEVGIRYLGRGREEGKKIGWRDGVRAVWCVAKYGILRR
>NC_017080.1|WP_014437500.1|2507112_2508783_+|energy-dependent-translational-throttle-protein-EttA
MPDETKIIYSMRNLNKVYDRKVILKDVNVSYFYGAKIGVLGLNGAGKSTLLKIIAGTDKKFEGEVQMQPGYTVGYLQQEPPLPDDATVEEVVNSAVQPIHDLMAEYDALGVRMGEDLSEKEMEKTLEQFGKLQDQLELKGAWELDAKLDMAMGALDCPPRDAKIGPLSGGEKRRVALCQLLLQQPDVLLLDEPTNHLDASSVAWLERHLQEYPGTVIAVTHDRYFLDNVATWMLEIEHTRCIPWKGNYSSWLEQKGKRLAVAEKQDKRLQAQLKKEQAWIGTSPAGRQAKNKARIQRFEELYEKAKKPKASEVRLYLAPGPRLGSKVIEARHVSKRYGDKVLLDDVSFSLPPGGIVGVIGPNGAGKTTLMKMIMGTETPDSGTLEIGETVELAFVEQMREGLKDDVNVWESITDGAETLKIGDLEMNSRAYVARFNFSGPDQQQMVHSLSGGQRNRVNLARMLTREFNVLLLDEPTNDLDVDTIRALEEALDDFPGCCVCVSHDRWFLDRVATHILAFEGEGKVRFFQGNYQQYAAHPDTPNIGADPNQRHKKLVR
>NC_017080.1|WP_014437501.1|2508937_2509969_-|hypothetical-protein
MHDFDEVAARLRDEKQGGRTLRRGAARLAVCERGARVMAADAGDGSADALYLADDDAGELCGGDRFWLGPEVAWFWPSLQAAREDPVKHAATPPQLDPGRWGVGEADAGSVTLHATMGLTDARDGRKIRLEAERTVRLIDPPPSLSAGVSAVAYAVDHRLTALGGEEGVVASSWSIAQVPPGGTLVCPTVRPLSVADDVTRYYDPFGDDHVKADADAVRFVIDARRRIKMGLRAEDTTGRMGYLRPLGDGRAVLLLRFFPTLPGERYCDVPRSADAGVRGGGDCLQAYNDDLTYGPFGEMEHHDPAVEVGGVENRCHSSTTLVLAGDEAAVRRDGGRLLGATL
>NC_017080.1|WP_014437502.1|2510100_2511225_+|glycine-cleavage-system-aminomethyltransferase-GcvT
MLSTPFEKFHEQHGAKMVDFAGWRMPLHYGSITAEHKQCRQSGALFDVSHMGRIEIKGRHARKFCERVLTRKVSDMPVKTARYALICNEAGGVMDDVLVYRFEDHFLLVVNASNRQKVLDHLHRTAEAESMVVRIGDVTKSTAMIAVQGPRVMEKIGGFSKEIPTLKRYAFTTKNLMILKMHVSRTGYTGEDGVEIMMGANMAGMAIKLLLKDAGEADALVKPAGLGARDTLRLEAGMPLYGHELSEETDPLSAGLGFGVSLDKDQPVDGQPPVPRFIGQDSLEQIHQDGPAKRLVGLLVEGPRTPRQDAAVLRDAAPVGLVTSGCHSPTLDRPIAMAYVDASAAGEGTRLAVRIGAEGEAPATVTALPFVRRG
>NC_017080.1|WP_014437503.1|2511425_2512106_-|hypothetical-protein
MPEQADRPGRLGYWTALALLAVGLALFVAAVVPAMRAVSAGVEGLQRVALWGASPAAEFRLETPGEVHFFYEPVTTVGPQAFATETTWEPELALERLEPGEPAAWVGVELVPTQSTIVYRTDGRAGHSLVSASAPSAGRYRLEVVEPGRAGNVAEGTIGPAAERPRVIAIGTVPVQRLKDGFVGVYGGAVALGLLGCAAAVLALITWARRHGTRTGRLDGQPTAWA
>NC_017080.1|WP_083855279.1|2512098_2512467_-|methylated-DNA--[protein]-cysteine-S-methyltransferase
MLSADRDLRGFFRGSVRGFGGWELATRGTAFQREVWAATREVPHGQTITYGELASRLGRPAAARAVGAALGANPWLVVVPCHRVLGRGGALTGFAAGLAMKRWLLDREAGPRGGASTLFGDA
>NC_017080.1|WP_014437505.1|2512758_2513379_+|inorganic-pyrophosphatase
MPQPAFPSTYYRWRPHPWHGLEPGIEPPIRMQAYIEITPFDQVKYETSKTTGYLRVDRPQRSSSQPPALYGFFPRTYCGDRVTKLSPNAQCGDGDPLDVCVISEQPINRGDVLVHTRVIGGLRCVDGDEADDKIIAILEGDNIWADVDCISDLPDVLVERLRHYFGTYKMIPGQPSQMEVHETYDQDKATEVILASMEDYAEEFGS
>NC_017080.1|WP_014437506.1|2513479_2514352_+|SDR-family-oxidoreductase
MQDPRTRFPQPPFENQKPFEMPGSTSKMDPTPDHGESSYTGSGKLKGHRALITGGDSGIGRAVAICYAKEGADVMLNALSESDDLTAAAAECRLHGGKVETSLGDLRQESFCKELVQQTVSKLGGLDVLVNNAAYQEVRESVDDVESELFDRIMKTNVYAPFWLSKEALNHIGAGGSIINTTSIQGFDPTPSLLPYATTKSALLGMTKALAGMAIEKGVRVNSVAPGPVWTPFIPGSMPEAQVQKFGGSTAFGRPAQPVEMAVMYVWLASADASYVTGETFGGTGGKMPL
>NC_017080.1|WP_014437507.1|2514546_2515212_-|MBL-fold-metallo-hydrolase
MNHRVISIGALSTNELWPPEAEQPGAAHATTVLVRSGGKNILVDPGLPGRVVTARLAERSGLRPPDIDVVFLTNFRPSHRRGLEAFPDAEWTLFEPEREAVGRALLARFQEEEDEANKRLLQEEINVLRRCTAATDALAPNVDLFPGPGFTPGTCGLLLIKPGRTVLVAGDTVPTQEHLESGRVLRGCYDTAKAQESLVDAIEIADLIVCGHDNVVVSPGR
>NC_017080.1|WP_154661858.1|2515340_2515922_-|pantetheine-phosphate-adenylyltransferase
MSEHSENRPRSAGSPPRPHRVGLFPGSFDPLTNGHLDVIHRGRHLFDELVVAIGRNPAKREVFSVDERIAMIGRLVAGTNVRVDAFAGLTVDYARDIGAVAILRGIRNVTDLNFEFQLALTNRAIADVETVFIMTGEVHAFTSSTLIKQIASAGDTSRLAKLLPPEVLEKLEEKKRALGGKLPWRHVDQAEGT

Crispr_ID: NC_017080_12

• CRISPR_ID: NC_017080_12
• CRISPR_location: 2695599-2695783
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_017080_12

Consensus_repeat	Method
GGAGCGGAAAAGGTGACAGCCACCGTTTATCTTCCCGT	CRISPRCasFinder

spacers of NC_017080_12

>12.1|2695637|43|NC_017080|CRISPRCasFinder
CGGAGGAGCGGAAAAGGTGACAGCCACCGTTTATCTTCCCGTT
>12.2|2695718|28|NC_017080|CRISPRCasFinder
TGGGGACCGCCCCGCCGCCTCTCCAGGA

CRISPR arrays and Neighbor proteins around NC_017080_12

CRISPR arrays

The CRISPR arrays of NC_017080_12

>merge|NC_017080|12|2695599-2695783|CRISPRCasFinder
GGAGCGGAAAAGGTGACAGCCACCGTTTATCTTCCCGTCGGAGGAGCGGAAAAGGTGACAGCCACCGTTTATCTTCCCGTTGGAGCGGAAAAGGTGACAGCCACCGTTTATCTTCCCGTTGGGGACCGCCCCGCCGCCTCTCCAGGAGGAGCGGAAAAGGTGACAGCCACCGTTTATCTTCCCGT

>NC_017080|12|11|2695599-2695783|CRISPRCasFinder
GGAGCGGAAAAGGTGACAGCCACCGTTTATCTTCCCGT	CGGAGGAGCGGAAAAGGTGACAGCCACCGTTTATCTTCCCGTT
GGAGCGGAAAAGGTGACAGCCACCGTTTATCTTCCCGT	TGGGGACCGCCCCGCCGCCTCTCCAGGA
GGAGCGGAAAAGGTGACAGCCACCGTTTATCTTCCCGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_017080.1|WP_014437651.1|2700449_2702174_-|L-aspartate-oxidase	unknown	unknown	gnl|CDD|223108
NC_017080.1|WP_014437642.1|2689316_2689781_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|379267
NC_017080.1|WP_014436513.1|2688627_2689299_-|IS630-family-transposase	unknown	unknown	gnl|CDD|315923
NC_017080.1|WP_041378088.1|2696080_2696452_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014437641.1|2688144_2688594_+|PilZ-domain-containing-protein	unknown	unknown	gnl|CDD|377796
NC_017080.1|WP_014437647.1|2697038_2697353_-|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl|CDD|224739
NC_017080.1|WP_154661865.1|2685039_2686305_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_041378084.1|2690596_2692654_+|hypothetical-protein	unknown	unknown	gnl|CDD|377084
NC_017080.1|WP_014437643.1|2689864_2690545_-|hemolysin-III-family-protein	unknown	unknown	gnl|CDD|224191
NC_017080.1|WP_014437654.1|2703818_2704184_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014437638.1|2683907_2684789_+|hypothetical-protein	unknown	unknown	gnl|CDD|366542
NC_017080.1|WP_014437640.1|2686475_2688011_-|polysaccharide-biosynthesis-protein	unknown	unknown	gnl|CDD|224011
NC_017080.1|WP_169332074.1|2704727_2705621_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|349758
NC_017080.1|WP_154661868.1|2702182_2702695_-|LEA-type-2-family-protein	unknown	unknown	gnl|CDD|377000
NC_017080.1|WP_014437650.1|2699568_2700318_-|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl|CDD|187594
NC_017080.1|WP_014437649.1|2699016_2699262_-|acyl-carrier-protein	unknown	unknown	gnl|CDD|179197
NC_017080.1|WP_014437648.1|2697609_2698857_-|beta-ketoacyl-ACP-synthase-II	unknown	unknown	gnl|CDD|274452
NC_017080.1|WP_154661867.1|2695010_2695580_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014437653.1|2702876_2703692_-|FliA/WhiG-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|274153
NC_017080.1|WP_014437637.1|2681993_2683520_-|sulfatase	unknown	unknown	gnl|CDD|293751

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_017080.1|WP_014437642.1|2689316_2689781_-|helix-turn-helix-domain-containing-protein	gnl|CDD|379267	pfam13565, HTH_32, Homeodomain-like domain.	1.2299e-07
NC_017080.1|WP_014437647.1|2697038_2697353_-|twin-arginine-translocase-TatA/TatE-family-subunit	gnl|CDD|224739	COG1826, TatA, Sec-independent protein secretion pathway components [Intracellular trafficking and secretion].	3.78585e-14
NC_017080.1|WP_014437641.1|2688144_2688594_+|PilZ-domain-containing-protein	gnl|CDD|377796	pfam07238, PilZ, PilZ domain. PilZ is a c-di-GMP binding domain which is found C terminal to pfam07317. Proteins which contain PilZ are known to interact with the flagellar switch-complex proteins FliG and FliM. This interaction results in a reduction of torque generation and induces CCW motor bias. This domain forms a beta barrel structure.	2.86807e-07
NC_017080.1|WP_014437637.1|2681993_2683520_-|sulfatase	gnl|CDD|293751	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase). N-sulfoglucosamine sulfohydrolase (SGSH) belongs to the sulfatase family and catalyses the cleavage of N-linked sulfate groups from the GAGs heparin sulfate and heparin. The active site is characterized by the amino-acid sequence motif C(X)PSR that is highly conserved among most sulfatases. The cysteine residue is post-translationally converted to a formylglycine (FGly) residue, which is crucial for the catalytic process. Loss of function of SGSH results a disease called mucopolysaccharidosis type IIIA (Sanfilippo A syndrome), a fatal childhood-onset neurodegenerative disease with mild facial, visceral and skeletal abnormalities.	1.1702e-51
NC_017080.1|WP_014436513.1|2688627_2689299_-|IS630-family-transposase	gnl|CDD|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	4.34251e-22
NC_017080.1|WP_041378084.1|2690596_2692654_+|hypothetical-protein	gnl|CDD|377084	pfam03629, SASA, Carbohydrate esterase, sialic acid-specific acetylesterase. The catalytic triad of this esterase enzyme comprises residues Ser127, His403 and Asp391 in UniProtKB:P70665.	3.7955e-14
NC_017080.1|WP_014437643.1|2689864_2690545_-|hemolysin-III-family-protein	gnl|CDD|224191	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only].	5.88998e-50
NC_017080.1|WP_169332074.1|2704727_2705621_-|AAA-family-ATPase	gnl|CDD|349758	cd02038, FlhG-like, MinD-like ATPase FlhG. FlhG is a member of the SIMIBI superfamily. FlhG (also known as YlxH) is a major determinant for a variety of flagellation patterns. It effects location and number of bacterial flagella during C-ring assembly.	3.75375e-78
NC_017080.1|WP_014437638.1|2683907_2684789_+|hypothetical-protein	gnl|CDD|366542	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel. This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae.	0.00567652
NC_017080.1|WP_014437640.1|2686475_2688011_-|polysaccharide-biosynthesis-protein	gnl|CDD|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	5.76428e-133
NC_017080.1|WP_154661868.1|2702182_2702695_-|LEA-type-2-family-protein	gnl|CDD|377000	pfam03168, LEA_2, Late embryogenesis abundant protein. Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This family represents a group of LEA proteins that appear to be distinct from those in pfam02987. The family DUF1511, pfam07427, has now been merged into this family.	0.00042754
NC_017080.1|WP_014437650.1|2699568_2700318_-|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl|CDD|187594	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs. This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	3.32672e-117
NC_017080.1|WP_014437649.1|2699016_2699262_-|acyl-carrier-protein	gnl|CDD|179197	PRK00982, acpP, acyl carrier protein; Provisional.	4.12249e-27
NC_017080.1|WP_014437651.1|2700449_2702174_-|L-aspartate-oxidase	gnl|CDD|223108	COG0029, NadB, Aspartate oxidase [Coenzyme metabolism].	0
NC_017080.1|WP_014437653.1|2702876_2703692_-|FliA/WhiG-family-RNA-polymerase-sigma-factor	gnl|CDD|274153	TIGR02479, RNA_polymerase_sigma_factor_WhiG, RNA polymerase sigma factor, FliA/WhiG family. Most members of this family are the flagellar operon sigma factor FliA, controlling transcription of bacterial flagellar genes by RNA polymerase. An exception is the sigma factor WhiG in the genus Streptomyces, involved in the production of sporulating aerial mycelium.	7.38979e-81
NC_017080.1|WP_014437648.1|2697609_2698857_-|beta-ketoacyl-ACP-synthase-II	gnl|CDD|274452	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II. 3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model. [Fatty acid and phospholipid metabolism, Biosynthesis].	0

Protein sequences

>NC_017080.1|WP_154661867.1|2695010_2695580_-|hypothetical-protein
MTLAVSLVFASAMGCGRAEDPPIEIVVRSLEDRWIDATPPMRTLAWTEYSLIESDGPGWVVIKSPGGTEPAARYAYRTISKKEQWSPESLGYYLFAGRDVMEAPEVSELALSLIRATGRTVSEREATALEELVTGIAYREISDGSASLSIYKDLDTPNGISLDVSRRPRGKPELTLDLYLRISDPDPLW
>NC_017080.1|WP_041378084.1|2690596_2692654_+|hypothetical-protein
MPKPLRPAVLSLLLCGPAAALTLHPTLGSHAVLQRDRAVPVFGSDVPGSRVRVTLLDGGRELASAEAITRDDGRFAVELPPQPAGGPYAIDVVRLPAAGLSEVAQRIDDVLFGEVWVASGQSNMQWPVSRSDGGGAADAEPIAGVRHLQVERTAAPKPADAPSSAAWRRTEPGHTAGFSAVAHHFARELHAEAGVPVGILHASWGGTPAAAWTPRPALRSTPETAPLIEADDAAAATPHDAAARAEALAAWEARHAPGGPESPRWLDPGLEPGEIRYAATAYDDGDWAPVDLPVSIESLPGADPAGVDGAAWFRKRVALPAALRGRALTLRLGRIDDADTAFVDGVEVGRTPQTLPRPYAVERAYAVPAAATGDGELVIAVRVFDDYGEGGFTGRREDLRLGAEGVAPLAIADGWRARITGPRKPLGRPVVAPPGEPGPPAQNRPAFLYNGMIAGLTRTPVAGIIWYQGESDAGEPERYRTLFPLLIRSWREAWGRPALPFLFVQLARFRAPLGEAFRDDGWGPIRDAQAHANATVPATGMAVILDLDDPDFNDIHPGNKTDVGRRLARLALRDVYGRDVAAEGPRVAGVVRRGRAAVVRFDAAAPPLRTDDGAAPAEFWLRAADGTIARAAAAIEPAGDALRLTAPGVDEPVEVIYAWATNPIGVNLTDGTGLPTAPFRLPIAD
>NC_017080.1|WP_014437643.1|2689864_2690545_-|hemolysin-III-family-protein
MRLSRWFPNPQLPSSPTPAEERANLASHAAAAVLAALAGVWLAVGSPSAAPPVLVWTGVFFALAMAVTFAASAAYHLHAEGPRKDRARRADHAMIYAAIAATYTPFAVAVIGGAVGLGLAATQWTLAAVGVWICLRHFHRFGWVQLGLKLAMGWMMLPVAGPAVAAIPPASLAWLLAGGVVYTVGVVFFLMEGLPFNHAIWHGFVVGGAGCHLVAVERAIAAAAAG
>NC_017080.1|WP_014437642.1|2689316_2689781_-|helix-turn-helix-domain-containing-protein
MAAKLKNRKLYHVHLTDDEREQLTTLVRSGRVAGWKIQRAQALLKCDESPGAPAWTDEQIAEAFDAGVRTVEGWRKKAVEEGPLSLLERKPQDRAMQRKLDGVGEAQLVTIACSDPPEGHDRWSLRLLAGRLVELKVVDSISREAVRCALQKTV
>NC_017080.1|WP_014436513.1|2688627_2689299_-|IS630-family-transposase
MWCIPPEQSAAFVAAMEAVLCLYALAYDPALPVVCMDEQPKQLIGETRRRFTDSTGRRIEDHEYVRHGTCNLWMFTEPLAGWRDVRTSRRRTAADWAHQIQALVDAPRYESATRIRLVCDNLNTHRIASLYEAFEAAEARRIAERIELVHTPAHGSWLNIAECELSVLSRQCLGRRIDTIQEIDREARAWAAARNQSQRGVHWQFTADDARIKLLSLYPRIAA
>NC_017080.1|WP_014437641.1|2688144_2688594_+|PilZ-domain-containing-protein
MPATEESAESLPPAPLPFAPHAAARRQERLKLPAMYTQVRAKQPGAARYTLSGHLYDVSMTGLRFELDEPLPAGQHLHFRVQLPGEEQATVRLEGSIVRLHDESNEPGPVRMGAQIVKFLWPTDRTILEDYLQARGVSTGGESTMRLAA
>NC_017080.1|WP_014437640.1|2686475_2688011_-|polysaccharide-biosynthesis-protein
MNAPTQRGSAAGPAPRERVLLVGLASTLPPLRAAMEADPAGPVPVAECCVAGAGAGDPVGVARRAGATRAILCLPASLGGRAARVGEALAAAGLPWVGVRPLREQLADAADRPGAGELDLAALTDRAPRPLDEALLGPLLRGRRVLVTGAGGSIGAELCRVIAAWRPSVLHAVERSENALFEVERELVRRFPGLPLAAVLHDVTQAERTHDLLQRLRPDLVVHAAAHKHVGMMEGHPAEAIENNLYGTRSVAAAADACGADRFVMISTDKAVNPTSVMGASKRLAERDVLGRDATSRTRMCTVRFGNVLGSACSVLPIWEDQLRRGGPLEVTDKRMLRYFMTIPEAAGLVLTAAALSGASGPAGGRRGGETFLLDMGEPVRIVDLAHRFLRQRGVEPGVDVAIRFTGARPGEKLFEELAHNADEVIPTAHPGIRVWRTAAVPASAQRATSRLDALRRRAGLAAPPWRGVSAAEAGAALRAAVPEMSGGAGGGAGAAQPVRLFAPPVHALAG
>NC_017080.1|WP_154661865.1|2685039_2686305_+|hypothetical-protein
MSPAAPEPAPQATPGYAAPPRAAAARKRRPLRVLLAGEAAGLAGVLEALRVRGRGVEVVRSEDDAATREALAETAPGRRADLAVLDATTRSSGGAALAAEFAGRRCRRVVLLANSFDAAEAARLGLLDLIDPALPPAAASARLAGALDRVAADAAARALRSRERRRSRRLLDRCSALEARCAAVEADRKVIADQVETLCSDLVGAYQELADRIDAKMSAAVGSDADADAAAAAPPAARDLRDTLGDHLGLEPVIRSTLEHLVSAAGGTNAAIFLPASMDEFSLGGYVNHTCNDESAGMLLEHLADVVAPKLSCAAAPVHLTDNDQLAAWFGQDAAWLDDSEFIGVPCSLNPADAGGGAAEEDAECLAVVVLFRDGDQPFGAAALEACESLGPVLAAALHRVIRVHHRSGLATPDDLDARED
>NC_017080.1|WP_014437638.1|2683907_2684789_+|hypothetical-protein
MRYVRLAGSSDQAPPPRPARFFNMGTFDGLPDTSSAPRGSEPERLAALREAGFEGVQGADADAARDAGLHSAASGRLDTPAEARDAVRRWKDQGHVAVTLHAGRGLESDAEADALAGAAADAEAEAGLPVYVETHRATITQDTWRTLQLLGREPRLGLNADLSHWYTGLEMPYAGVERVADFLAPTFERVGFLHGRIGSSGSMQVDAGNDLAHALTLEHVRHFVLLWTRAAAAFRANAEPGDVLPFAPELLGSQHHYARVFPAGDGQLREETDRWQQALLLCELFEHAFEAAG
>NC_017080.1|WP_014437637.1|2681993_2683520_-|sulfatase
MNILYLDLDALNPLHLGCYGYHRNTSPNIDAVAAAGVRFDQVYCSDAPCLPSRTALYQGRFGIHTGVVGHGGLAADPKREGAGRGFRSTYEEDSFPRQLQKRGFHTAMISPFGQRHAAHQYYAGFHEIHNTGEGGSEPVEVVEPVLDRWLDANAAKDRWYLHLNFWDIHTNYRTPLSYGNPFEGEPIADWYTDGLIAEHARRGGPHSSQDLSMYHDADVDRYPRLPLRITDRASLTRWIDGYDVAIRYVDDALGRLFDRLKEAGVWESTAVIVSADHGENQGDLGIYGEHATADRGTCHIPMIVRWPGAAEGVRDDALHYHLDWAPTCLELLADAGVEGPEAPGVWDGESYAATLRDGTAAGRDTLVVSQCAHVCQRSARWDDGAHRWLYMRTYDDGLQPFPKHMLFDLAADPHEQNDLAASRPGVVREGAARLLDWHDDAMAAVVRDGPDVVDPMYTVLSEGGPYHGRTDVYGRPVDLAAYARRLRETGRPEAAEDYQRRAAAAPAR
>NC_017080.1|WP_041378088.1|2696080_2696452_-|hypothetical-protein
MTPQQLADEMVEQGAVFMPTGTHLDFILATVRWLDDPQRVRWCAIFPEHQGHVHEAPYDELVIEAGGLGVGLRRDGKRAGYICPIIESGLDHDEAVAALAEWRHLLARHNNQQQHEQFLDDAI
>NC_017080.1|WP_014437647.1|2697038_2697353_-|twin-arginine-translocase-TatA/TatE-family-subunit
MLPTPLALLGPIGTPEMIVIGIVGLLIFGRRLPEVGKSLGKGIVEFKKGLSGIEDELSADQKAVSGGHTSVTVDNQRPIPSLEKEPSSAPATEEQPAAATRHPA
>NC_017080.1|WP_014437648.1|2697609_2698857_-|beta-ketoacyl-ACP-synthase-II
MDKRRVVVTGLGWVTSLGLGVDEVFEKMVAGTSGIGPITKFDTTDFNTKFGGQVQDWDGPPVIEGVERSRYAKKMDRFAQFALNAGVEAVLDSGIDLAKEDPWRCGAIVGSGVGGIEEFADGHEKLLKKGPSRVSPFMVPKLMCNAAAGHLSIHYGIKGPNSAISTACASGAHSIGAARDAIRFDQADVMIAGGAEAALTPLGTSCFMALKALSRRNDDPQAASRPFDVDRDGFVLAEGAGLVVLEEYEHARARGAKIYCELMGFGQTADGTHITAPPEDGHAVAHAMERALRDAALDPEDIDYVNPHATSTPLGDLAETNAIKAVLGESTKTPVSATKSMTGHSLGAAGGIEAVIVAKSLQTGKICPTINLDRPSPGCDLDYVPGSGRDADLKYALSNSFGFGGHNVTLVFGKV
>NC_017080.1|WP_014437649.1|2699016_2699262_-|acyl-carrier-protein
MEEAAIREKVYEIVAEQMGVEKSEINDSTNFVNDLNADSLDTVELVMEFEDEFETSIPDEEAEKIQTVGQAIEFIKKNSDA
>NC_017080.1|WP_014437650.1|2699568_2700318_-|3-oxoacyl-[acyl-carrier-protein]-reductase
MPSTPTPTLRIALVTGASRGIGAAIAHALAARGDHVVCVARNQDRLDGVVGAIREAGGQASSRTCDIADGEALAALVEGVNEEHGRLDVLVNNAGITRDNLLLRMSDAEWDDVVSTNLRSVFVACRAGAKAMLSNRYGRIVNVGSVSGVAGNAGQSNYAAAKAGLIGFTKSLSKEVGKRGITANVVAPGFIRTDMTENLPEKIKEGVKSATSLARMGEPEEIAAAVEFLTGERAGYVTGQVLVVDGGMI
>NC_017080.1|WP_014437651.1|2700449_2702174_-|L-aspartate-oxidase
MPHRQRRYLIPFRATLLPQIFTDVLVVGAGVAGLRAALAAAERGADVIVAAKGELEQSSTAWAQGGIAAVLDPDDDTAHHLADTLTAGAGLVDEPVARRIVEGGPAAVRELAAWGMPFDAAGEPRDAPGMGDLGMPARLALGREGGHSHFRIVHSDGDATGRALVATLGRRVSEAEGVRSFMGCYVLDLLTDEGGRVLGAITHHDRHGLQVIWAGATVLAAGGCGQVFRESTNPGVATGDGHAMAWRAGAALRDMAFVQFHPTTLYIAGASRSLITEAVRGEGAHLVDRNGHRFMPDYDERAELAPRDVVSRSILQQMARTGHTHAYLDVSPIGTGRFVERFPGIAAMLKKFEIDPGQPIPVHPSAHYMIGGVEVDGSGATSSPGLFACGEAACSGLHGANRLASNSLLEGLVLGETVGQAAADAASAHGAHRTKIVSDIPLSDRTGLDLADVRSSLRSVMWRHVGIERTGEHLREVGDMFAFWSRYTLDKIFDDRAGWEVQNMLQVGALIARAAAWREESRGTHFRLDFPEPEESFRVHDRWLRSDDAPRREPVDAGDELSVREAPSVPAGRG
>NC_017080.1|WP_154661868.1|2702182_2702695_-|LEA-type-2-family-protein
MRLRPAVLVTSMLLPAVAGCGIPRSIGRAVTEGFVERPTIELVDLAVTRRTPEGVAFAATVEMSNPNAVELPLSGIGMTLSVKGLGSFDAPSPPSVSLPPRGSKRMVLRGALPAPVPADATLDGRAYRCAVAATYVPPGELREIGTESGFPLPVTRTSVRGTLGRADAGT
>NC_017080.1|WP_014437653.1|2702876_2703692_-|FliA/WhiG-family-RNA-polymerase-sigma-factor
MALRTRTRTPRIKPTPEQEEATRKIWVRYEKKPSDALRNDLMERYLPLVRYNAERVHTKLPDEVDVDDLMSAGVFGLKDAIEAFDLGRGVKFETYCAPRIRGAILDELRSMDWVPRLVRSRSSQVDKARRSLEMQTGVKPTDDEIIEELGVDEEEFVKIKRDSSAVGMVSLSRKWFESDSSKDVREIDVLADTRQANPFKEVQKSDLKQLITKGLSRAERLIVILYYFEEMTMKEIGATLDLSESRVSQMHSSILARLKAQLSHRERELED
>NC_017080.1|WP_014437654.1|2703818_2704184_-|hypothetical-protein
MTPAARDLAAAPRPPRSPTIRPRLFATSFGLLCFAAALLAGTIAGNASSAVLGRGLVVLLAAYAAGRMLEAAAALALAEGPDADAPSDAGDAAEGPETLPLSAALSPSDEAPPVAATRRAA
>NC_017080.1|WP_169332074.1|2704727_2705621_-|AAA-family-ATPase
MVDRLAGEAKAHPPTGEAAARTSSPRRRARTVAVASGKGGVGKTTLVVSLAAELVRRGRRVLVLDADFGTANVDVACGLTPEATLADVLAGTHRLPEIALRTPAGFHLLPGASGLTGAGDLPAEHLGDLFKGMDRLEAANDLILIDVGAGVGPVVQAFCAAAARLLVVTTPDPTAVTDAYALLKTLALSDDAQHARVVVNGVRDATEAGEVHDRLESACRHFLGFSPSLAGYVPDDPAVAAAVRARTPLLQEAAATPAGWQMARLAATLDSRGASQRPVEAAPDRGRGFLRRLLRIG

Crispr_ID: NC_017080_13

• CRISPR_ID: NC_017080_13
• CRISPR_location: 3630412-3630520
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_017080_13

Consensus_repeat	Method
AGTCAAGGGGTCGGGCAGTCAAGGGG	CRISPRCasFinder

spacers of NC_017080_13

>13.1|3630438|57|NC_017080|CRISPRCasFinder
AGTCAAGGGGTCGGGCAGTCAAGGGGTCAGGCCCCTGGCAGTCATGGCAGTCAAGGC

CRISPR arrays and Neighbor proteins around NC_017080_13

CRISPR arrays

The CRISPR arrays of NC_017080_13

>merge|NC_017080|13|3630412-3630520|CRISPRCasFinder
AGTCAAGGGGTCAGGCAGTCAAGAAGAGTCAAGGGGTCGGGCAGTCAAGGGGTCAGGCCCCTGGCAGTCATGGCAGTCAAGGCAGTCAAGGGGTCAGGCAGTCAAGGGG

>NC_017080|13|12|3630412-3630520|CRISPRCasFinder
AGTCAAGGGGTCAGGCAGTCAAGAAG	AGTCAAGGGGTCGGGCAGTCAAGGGGTCAGGCCCCTGGCAGTCATGGCAGTCAAGGC
AGTCAAGGGGTCAGGCAGTCAAGGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_017080.1|WP_014438426.1|3627963_3628737_-|hypothetical-protein	unknown	unknown	gnl|CDD|183011
NC_017080.1|WP_014438425.1|3626689_3627967_-|M20-family-metallo-hydrolase	unknown	unknown	gnl|CDD|349880
NC_017080.1|WP_083855233.1|3636758_3638861_-|beta-galactosidase-trimerization-domain-containing-protein	unknown	unknown	gnl|CDD|379709
NC_017080.1|WP_014438434.1|3640534_3643771_+|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl|CDD|223911
NC_017080.1|WP_014438419.1|3620141_3620459_-|hydroxyisourate-hydrolase	unknown	unknown	gnl|CDD|376352
NC_017080.1|WP_014438435.1|3643813_3644944_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_041378168.1|3639098_3640538_+|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|273776
NC_017080.1|WP_014438422.1|3622004_3623315_-|allantoinase-AllB	unknown	unknown	gnl|CDD|238640
NC_017080.1|WP_014438430.1|3634733_3635564_+|xanthine-dehydrogenase-accessory-protein-XdhC	unknown	unknown	gnl|CDD|274366
NC_017080.1|WP_014438429.1|3632323_3634756_+|xanthine-dehydrogenase-molybdopterin-binding-subunit	unknown	unknown	gnl|CDD|274367
NC_017080.1|WP_014438421.1|3621462_3622008_-|2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline-decarboxylase	unknown	unknown	gnl|CDD|184333
NC_017080.1|WP_014438423.1|3623364_3624225_+|urate-oxidase	unknown	unknown	gnl|CDD|274554
NC_017080.1|WP_014438420.1|3620455_3621343_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223999
NC_017080.1|WP_053230200.1|3624234_3624942_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559
NC_017080.1|WP_014438428.1|3630770_3632327_+|xanthine-dehydrogenase-small-subunit	unknown	unknown	gnl|CDD|274365
NC_017080.1|WP_014438437.1|3646578_3647649_+|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl|CDD|224007
NC_017080.1|WP_053230255.1|3629030_3630254_-|Zn-dependent-hydrolase	unknown	unknown	gnl|CDD|236456
NC_017080.1|WP_014437560.1|3625284_3626487_+|IS5-family-transposase	unknown	unknown	gnl|CDD|377531
NC_017080.1|WP_014438436.1|3645063_3646290_-|putative-cardiolipin-synthase	unknown	unknown	gnl|CDD|234967
NC_017080.1|WP_014438431.1|3635589_3636687_-|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl|CDD|99744

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_017080.1|WP_014438426.1|3627963_3628737_-|hypothetical-protein	gnl|CDD|183011	PRK11171, PRK11171, (S)-ureidoglycine aminohydrolase.	1.05863e-80
NC_017080.1|WP_014438425.1|3626689_3627967_-|M20-family-metallo-hydrolase	gnl|CDD|349880	cd03884, M20_bAS, M20 Peptidase beta-alanine synthase, an amidohydrolase. Peptidase M20 family, beta-alanine synthase (bAS; N-carbamoyl-beta-alanine amidohydrolase and beta-ureidopropionase; EC 3.5.1.6) subfamily. bAS is an amidohydrolase and is the final enzyme in the pyrimidine catabolic pathway, which is involved in the regulation of the cellular pyrimidine pool. bAS catalyzes the irreversible hydrolysis of the N-carbamylated beta-amino acids to beta-alanine or aminoisobutyrate with the release of carbon dioxide and ammonia. Also included in this subfamily is allantoate amidohydrolase (allantoate deiminase), which catalyzes the conversion of allantoate to (S)-ureidoglycolate, one of the crucial alternate steps in purine metabolism. It is possible that these two enzymes arose from the same ancestral peptidase that evolved into two structurally related enzymes with distinct catalytic properties and biochemical roles within the cell. Downstream enzyme (S)-ureidoglycolate amidohydrolase (UAH) is homologous in structure and sequence with AAH and catalyzes the conversion of (S)-ureidoglycolate into glyoxylate, releasing two molecules of ammonia as by-products. Yeast requires beta-alanine as a precursor of pantothenate and coenzyme A biosynthesis, but generates it mostly via degradation of spermine. Disorders in pyrimidine degradation and beta-alanine metabolism caused by beta-ureidopropionase deficiency (UPB1 gene) in humans are normally associated with neurological disorders.	1.68325e-151
NC_017080.1|WP_083855233.1|3636758_3638861_-|beta-galactosidase-trimerization-domain-containing-protein	gnl|CDD|379709	pfam14871, GHL6, Hypothetical glycosyl hydrolase 6. GHL6 is a family of hypothetical glycoside hydrolases.	6.468e-26
NC_017080.1|WP_014438434.1|3640534_3643771_+|efflux-RND-transporter-permease-subunit	gnl|CDD|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NC_017080.1|WP_014438419.1|3620141_3620459_-|hydroxyisourate-hydrolase	gnl|CDD|376352	pfam00576, Transthyretin, HIUase/Transthyretin family. This family includes transthyretin that is a thyroid hormone-binding protein that transports thyroxine from the bloodstream to the brain. However, most of the sequences listed in this family do not bind thyroid hormones. They are actually enzymes of the purine catabolism that catalyze the conversion of 5-hydroxyisourate (HIU) to OHCU. HIU hydrolysis is the original function of the family and is conserved from bacteria to mammals; transthyretins arose by gene duplications in the vertebrate lineage. HIUases are distinguished in the alignment from the conserved C-terminal YRGS sequence.	7.9843e-47
NC_017080.1|WP_041378168.1|3639098_3640538_+|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.17412e-26
NC_017080.1|WP_014438422.1|3622004_3623315_-|allantoinase-AllB	gnl|CDD|238640	cd01315, L-HYD_ALN, L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.	3.57374e-171
NC_017080.1|WP_014438430.1|3634733_3635564_+|xanthine-dehydrogenase-accessory-protein-XdhC	gnl|CDD|274366	TIGR02964, conserved_hypothetical_protein, xanthine dehydrogenase accessory protein XdhC. Members of this protein family are the accessory protein XdhC for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB, in bacteria. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products. [Protein fate, Protein folding and stabilization, Purines, pyrimidines, nucleosides, and nucleotides, Other].	3.56092e-52
NC_017080.1|WP_014438429.1|3632323_3634756_+|xanthine-dehydrogenase-molybdopterin-binding-subunit	gnl|CDD|274367	TIGR02965, xanthine_dehydrogenase, xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase. [Purines, pyrimidines, nucleosides, and nucleotides, Other].	0
NC_017080.1|WP_014438421.1|3621462_3622008_-|2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline-decarboxylase	gnl|CDD|184333	PRK13798, PRK13798, putative OHCU decarboxylase; Provisional.	2.30677e-46
NC_017080.1|WP_014438423.1|3623364_3624225_+|urate-oxidase	gnl|CDD|274554	TIGR03383, Structure_Of_Uricase, urate oxidase. Members of this protein family are urate oxidase, also called uricase. This protein contains two copies of the domain described by the uricase model pfam01014. In animals, this enzyme has been lost from primates and birds. [Central intermediary metabolism, Other].	1.08648e-93
NC_017080.1|WP_014438420.1|3620455_3621343_-|alpha/beta-hydrolase	gnl|CDD|223999	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only].	2.51662e-09
NC_017080.1|WP_053230200.1|3624234_3624942_-|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	1.58801e-22
NC_017080.1|WP_014438428.1|3630770_3632327_+|xanthine-dehydrogenase-small-subunit	gnl|CDD|274365	TIGR02963, Includes:_Xanthine_dehydrogenase, xanthine dehydrogenase, small subunit. Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and [Purines, pyrimidines, nucleosides, and nucleotides, Other].	4.11515e-135
NC_017080.1|WP_014438437.1|3646578_3647649_+|sugar-phosphate-isomerase/epimerase	gnl|CDD|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	2.24279e-24
NC_017080.1|WP_053230255.1|3629030_3630254_-|Zn-dependent-hydrolase	gnl|CDD|236456	PRK09290, PRK09290, allantoate amidohydrolase; Reviewed.	1.67553e-142
NC_017080.1|WP_014437560.1|3625284_3626487_+|IS5-family-transposase	gnl|CDD|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	1.26099e-24
NC_017080.1|WP_014438436.1|3645063_3646290_-|putative-cardiolipin-synthase	gnl|CDD|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	2.04169e-75
NC_017080.1|WP_014438431.1|3635589_3636687_-|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl|CDD|99744	cd06451, AGAT_like, Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.	7.84074e-135

Protein sequences

>NC_017080.1|WP_053230255.1|3629030_3630254_-|Zn-dependent-hydrolase
MLRCDAIAACSEEEDRITRRYLTPAMKEAHGKLAGWMRSAGLAPRTDAAGNLIGRRSAAPLDGSRPRVLLLGSHIDSVPGAGRYDGVLGVLAALAAVEAFGRREPLPFHVDVVAFSEEEGVRYATPYLGSRAVAGTFDYELLTRPDRSGVLMEDAIRAFGQNPRLLPEAAYRPEDVLGFVETHLEQGPLLEAAGRSVGVVSAVAGQSRLLVRLTGRTAHAGTRPMDQRQDALLAAAGVVAAVRAEGLATPGLKATVGRLDVLPNTRNVVPGRVDLSMDVRHAEDAVRVAAVGRLLEQAIDLAAAEGCELTVEENQNQPAVKMDAKLGARCGALLAELGQAGPAMVSGAGHDAVVMAAEFPAALLFLRHPGGISHHLDEAADVADVAVAVELLVRLMKRLAAPDDPRR
>NC_017080.1|WP_014438426.1|3627963_3628737_-|hypothetical-protein
MPEHSTTHPLGHTRTVVAADHALVAEDTHVTAPLHGWEAAEGAVLISPAMGAMGRGPGFTMAVATLGGGARLATRGHGRERVVYVLAGGLSVEGTGLTADSWAYLPAGERVEMAVAESARVLIFEKAYAASEGVAAPGLLHGHADDTPAEPFLGDPGARLQTLLPGDASFDLAVNRFSFDPGVALPLVESHHNEHGLFMQHGRGVYRLGAGPTESWYPVQAGDAIWMAPFCPQWFVAMGPEPATYLYCKNVNRDVMA
>NC_017080.1|WP_014438425.1|3626689_3627967_-|M20-family-metallo-hydrolase
MNATLPEIAVDAARVVAELKKLATFSAEAEVPAGLPEPTTAVSRVVFTEPDLAMRAWFTGLCEEAGLTVRVDPMGNTFARWGDPAASGAVGTGSHNDAIPHSGMYDGTVGVLGGLEAIRALQRAGFVPVRPIELVMFTSEEPTRFGLGCSGSRVMTGAMEAAEVAALTDPEGRSFDDVRRAAGFSGDLADARLAPDHFHAFVELHTEQGPLLEREGLDIGIVTAIAAPLAAEFEVLGAGGHAGAVLMPDRHDALCAAAEMVLAIEAAAKSSGAVDTVTTVGEFTPHPGHGNSIANRVRFTLDLRDTDGDRRDAAWAKIRDGIDAICARRGVTATHRVLNADPPAACYPLVVDAVADAAAGLTTKRTISRAYHDSLFMARVCPTGMIFIPCRGGVSHRPDEFASESAIGHGVLVLARTLARLATST
>NC_017080.1|WP_014437560.1|3625284_3626487_+|IS5-family-transposase
MRGRVASSSPMFFAIDLEERIRPDHPLRPIRRIVDRILGDMTADFDAAYADVGRPGVPPERLLKLMLLQALYGVSSEAKLFDRLDTDLVFRWFCGMDPAEPVPAATAFTHNRDRLIKHKLAEKFFTAVTKLAIDTGKVSTEHFSVDGTLIESHGSIKSFVPNATADAAQARKQHCGGDDQDHDKGPGGTGGFKSRNPEQDFHGQKRSNATHRSVTDPEAKLYRKGDGQPAKLSHMGHLLVDNRSGIIVGMKLSEANGFAERETALELVDTLKTTHGISARTVGADAGYDAGAFLRELEDRGATPHVAPSRERRPGGRRGPKKADRPKLAARLRNFRRKLRDRGYAISQRKRKKVEEPFGWLKSHALLSKARLVGRERIQQQWHIAAAGLTLVRLRNLMAA
>NC_017080.1|WP_053230200.1|3624234_3624942_-|Uma2-family-endonuclease
MPAALSATVPVALPEGAWLVPREPERQVIRFLTAAAWHAALGGVPLERVRLDPAPGTATAEDALVASEQKPLVELVHGTLVEKAMGVRESQIAAALIFLLSSHVRPRRLGAVFGADATFRMPGGNVRLPDVSYVQESRLPQKLMRVTPLCPDLVIEVLSRGNTKEEIDQKRSELFAGGTRLMWIIDAGSATAVIYTQPNEPDEAITIGGELDGGNVLPGFRIALAEVFEGVHGQG
>NC_017080.1|WP_014438423.1|3623364_3624225_+|urate-oxidase
MHTLTHSTHGKSRVRVSKILRPREKPAVEETHRFLEAAVEVLLEGGTDAAYTDGDNANVVATDTVKNTVFALARDTDYDDLPTFGRVLANHFLSRYEHVTKVTVAMEGHTWHRLLDCPHAFTGSDAEARRVTVVAERGQPLRLADGFGGLMLAKTTATSFENFHRDAYRTLPDAADRVLATVLTASWAVNGSADRDDFDAVFATVRGALLTAFVDHHSVSVQATLYRMASAALDATDAIDAVTMSMPNKHHLPVDLSKLDRENDNVVFQVTDEPAGAIQATVTRGR
>NC_017080.1|WP_014438422.1|3622004_3623315_-|allantoinase-AllB
MPDPVPLLVLRSSRVLLPEGERPASVEVADGRIARVLALDDPAAAGGTDLGDLVLMPGLVDTHVHLNEPGNTEWEGFATGTAAALAGGFTTVVDMPLNSLPVTTTPEALTQKRAAAKDKLSCRVGFWGGVTGGMGEAEIEALLDAGVWGLKAFLCDSGLASFGAAGEAELRVAMAALARRGLPLLAHAELATDTPAAAPADPRSHDAWLASRPPSMERDAIALLVRLCRETGCRTHVVHVADAGSLPLIAEAKAAGLPLTAETCPHHLCFAAEEIPAGATAFKCAPPIRDAANREMLWAGLADGTLDLVASDHSPCPPSMKAQEAGDFVAAWGGIASLEVSFAATWAEASRRGFGLADVVRWMGERPAALAGRTFGIAEGHPADLVALDPDARWTVRGAELHHRHPLTPHEGREVRGLVKRAWIGGRPAGPGILQP
>NC_017080.1|WP_014438421.1|3621462_3622008_-|2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline-decarboxylase
MTLNDLNALRETDATAAFLACCGTRWWAQQMAASRPFRSLAELHEAAGMIFEAMGEGHWLEAFEAHPRIGERPGSERSRSAGNREWSAGEQAGMSDADAEARAAMAEENANYEARFGWPFIVCATGRTADEMLVACVRRQRNAPEKEAAVAAAEQRKITALRIAKLLTAEHGEGASAEVRE
>NC_017080.1|WP_014438420.1|3620455_3621343_-|alpha/beta-hydrolase
MQAASDPDPQSRPRRRGFARSLRRLGPLVGVLFLLSGGLIMLLERSLLYPAQHMKPRAELDLPPGAERWWAEHGEGRTAAHFYPGEGVSEAAPGPVVLFAHGNAEFIEDYEEAFPMYRALGVSVLLVEYRGCGHSTGRATKRGITADHLAFFDRLAADPRVDPAGIVLHGRSMGGGIVATVAAQRPAAAALILESTYTSISRIAWSLWVPGFLIRDDWDVTAALALYEGPVLIVHSEIDEVLPYAMGEANAAARPDATFHTYRLSHLNPMPSQFFRDAEAFFRANGVLPAESPTT
>NC_017080.1|WP_014438419.1|3620141_3620459_-|hydroxyisourate-hydrolase
MSLSTHVLDTALGVPAAGMSLRLRDADGAVLAEGTTNADGRYGELPAVGAGVFVLRFETAAYFALSGRPCFYPSVEVRFEVTDPASHHHVPLLVSPFGFSSYRGS
>NC_017080.1|WP_014438428.1|3630770_3632327_+|xanthine-dehydrogenase-small-subunit
MRDHAVLYLNGRRREVRGADLLLPLSTWLRENQRLTGTKIVCAEGDCGACSLLVGRREDPADDALTYRAIDACIAFVYQADRAHVVTVEGLREEDGSLSSVQQAMVACHGSQCGFCTPGFVTTIHAVHEEPKQVGVTVNGQEPDEEEIDWPHALSGNLCRCTGYVQIFDAARAVDPASLTRLNDRYPAAAMLDDFDAAAEAPLDASFERGGRPCRVAAPRTLAAAAAFRAEHPACRVASGTTDLGVQHRHGRYEPEVVLGLHAVDGLGGIDRVSDDDAGGESKREHLLIGAAATWTRIAREVQRDLPAYHAVLMRFGSPQIRNAGTLAGNLANGSPIADSVPLQLVLEAELELISGAGVRRRVPLTRFYTGYKQMDLRDDELIAAVRLPLPMPSQRLSLHKVSKRRDMDISTFTAAILLDFADRDAAGEEGSTIRGARVAYGGVAATVVRLGAVETFLEGAAFTEATMREAGRIARGELTPLSDVRGSAEFRLSLCENVMVKAFHEIVGEAAVAGGAS
>NC_017080.1|WP_014438429.1|3632323_3634756_+|xanthine-dehydrogenase-molybdopterin-binding-subunit
MSSVGLAIPHESAVGHVTGSAPYVEDLPRTDGELFVAFAGSPVAAGRITGIDTAEAAAMPGVAGVWTAADLAGPNVFGPIFHDEPFLADDELSYLGQPVVVVAAETRAQAEAAAAEVVIAVEEATPILGIDDAIEAGSTLGPVRVIERGDVADAFATAPRVLEGVFENGGQEQFYLESQACLATVDELGRVHVRSSTQNPTETQAVVAEAFGLGMHEVVCECRRMGGGFGGKETQSAIPAVMCALVARQTGRPARVVYNKSVDMLVTGKRHAYRSRWRVAFDDDGRVLALAIDFDSDGGAFADLSTSIMERTMLHADNAYALPACRFVGRIARTNLPPNTAFRGFGGPQGVIVIESVLDEVAAALGIDGFAIRQRNRYVDGDPERSIAPYGAVVKDHVLGELLDTLEASSDFADRRTEIERFNATSRTHLRGIGVCALKFGISFTTKFLNQGNALVNVYYDGTVQLSTGGTEMGQGLFTKARQVVADAFGIHHEAVRVMTTSTEKNHNTSPTAASAGSDLNNAAALDACRQIKERMVRYAAKAFASEEFGREYSEDHVVIADGRVYDSRVPIDAPTEAYGVHAFDFGRFCDAARRDRVDLGARGFFSTPGVDFNRVTGRGNPFYYHTTGAAVAGVTIDRFTGEIVVDRVDLLMDVGKMINPGIDTGQVIGGFVQGMGWCTTEELTYDATGRLTSDSPTTYKIPAATDVPRDFRFGFLENPKHKTNVRQSKAVGEPPLMLAPCVWLAVKHAIGFVGDASALRLPATGEEVLRCLGLPRRDPADGRFQRGFLPEDAPAEAWTGAPDGEPARR
>NC_017080.1|WP_014438430.1|3634733_3635564_+|xanthine-dehydrogenase-accessory-protein-XdhC
MANPRDAEHGDDTRFPDRFPELEDIPHVEILLVDAHGSTPADAGARMVVTEAGRHAGTVGGGRLEAKAIAEAQEMLRTGGSTRFRDWNLRRDVGMTCGGTVKLYLESHNASDWRIAVFGAGHVTQAVARVLVQLPCRLTCIDPRADWLAQLPEGVETRHRGEPGVPAEVDTLPDRTHVLCMTRGHAADRPVLRRIFETGRGFAFLGVIGSAAKAATLRRELEKEGVPADRIAFECPVGLPIGGNHPAEIAVSITARLLQARDAPRPRTAGAKPPRA
>NC_017080.1|WP_014438431.1|3635589_3636687_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MLDLPTRHLHGPGPSPVPPSVLEALGQPCIGHMDPAFMRVMNEVREMLQQVFGTENEMTLACSGTGSAGAEMLMDNLVEPGDACLIGVNGVFGGRLTDKARRAGGVVTNLHADWGQSFSRTLIKEKVAELKPKIVCFVHAETSTGTLQPFEGLADAVHEHGGLLVMDCVTSLAGRPVELDAWGVDAAYSGTQKCLSCPPGLSPVSLSERAMEKVRSRKTKPNSWYLDLNLVGNYWSGSRAYHHTAPVNMNFALHEALRLVLEEGLEVRYARHRRVHERLKAGLETRGFRYASDPEWTLPMLNLVSIPDRVDDEAAVRKRLLLDHHLEIGGGLGALAGKCWRIGLMGHGATDEAVDRILAGLDAVL
>NC_017080.1|WP_083855233.1|3636758_3638861_-|beta-galactosidase-trimerization-domain-containing-protein
MGPGGRRPDRPPPDRPRTVPADRVEGSSMKLRYRQVHLDFHTSGDIEGVGKDFDPDRFGDTLAAAGVDSINLFARCHHGYLYYPSKAFPERIHPHLARPSLLPDQIAACHDRGIRAPIYVTVQWDQFTRDAHRDWMLIDEEGRGTGRGPLEAGFYDRLDVSHPGYVSFLKEHVRELFELMPVDGLWFDIVVPVFSFDARWLKAMLKEGKDPRNPADQMAYARRVIDAFKLDMARFIRGLPQHTPDCTIYFNAGHVGPRHRSSTEAYTHYEVESLASGGWGYMHFPVAQRSGRELGKPVLGMTGKFHGSWGDFHGYKNEAAMEYEVFQMLALNGACSIGDQLHPHGELDPTTYKLIGHVFHAIEAKEPWCRGAEAVTDVAVMNPEAYATAEGLWQDETHGRTDFGVVKMLTELGTQFDLITSEKDLSGYRLVVVPDEVPVDAAFGEKLKSFVEAGGAVIASHESGLLPDGSGFAEPIASAVERVGPAEFEPDFIHPGPELLDGLDATRYVMQQRALQVRTRPGTEVLAAVERPFFNRAWQHFCSHRYTPTSFQKVYPGVTEKRIGGGRVIYFAHPVFRSYHEQAPRWIKRLVRNAMRRVLPDPIVEHDGPSSLQVSLNRQPEQGRRVLHLLHYIPERRGQAFDVIEDAIPLHGLKLTVRGSAGVASVKRVPGGEPIGFDLDGETLTFTVPKLVGHAMIEIA
>NC_017080.1|WP_041378168.1|3639098_3640538_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MLPDAPDAAPEEPADAPAAPAGAAPPPAADRRRPGPLSLAVRGVVAVVVVAAGAAGAWALVATMPVIDLAPVEAVATPVIVFDPSPQPVARPWSGYGTAEALTAADVPARVTATVASLGEGVRDGAAVGAGQTLVTLERADFEDEVTRLESLAADADAQLRELDSREARLDEQAGLLEEDLDLQTRELERVSRLEGRSVATGQDVDRARSQVLAARSALSAMRQSRESIPTRREALTATAAALEAQLRVARRNLGRTTIKSPIRGYLQSLDVEAGEAVSPGQRVARVVDPAVVEVPLKLPAGARRGVRVGDPVELRSSWDLREREGGAPAEGENPAWTGKILRINPTDDAQTRTLTVYVVLDQADTPAAERLAPGLFVAGTVTAGEPTPRVVVPRRSLRRGRVQLVGPDAEGRPRVRSVPVSVDFHLRARLPGTGLPDDQWAVLDAPLPAGERVVLTANASLLDGQAVDPRDAAARGER
>NC_017080.1|WP_014438434.1|3640534_3643771_+|efflux-RND-transporter-permease-subunit
MSLAAFGVRKPVPANLLMVALLIGGLFAGLTLRKQFFPETDPQSAIVRIVYPGATPEEVEETMAIKIEDAVFDLDEVDEVITNLAEGGGSVSVGFVDGTDGDAGVDAVERELAALQDLPPEAEPLTVELIEPQLPVIQMAVFGPVDDSVLKETARSIKDDLAGLPGMGEVRISGVRDYELSVDVQQSALIEQGISLATVANRVRAAMDEVPGGSVRNQTGTSNLRTEGVAETADAVAGIVIASGPDGSVVRLGEVAEVSEGFTDAGVNTRFNGQPGAYVTVYKKGRQDIVRIAEMVRAYVDARRGEPPAELSWLARKIKPHVVAAAELGRDAPQLPGGAEVARFTDLARFVEGRLDLLLRNALMGAVLVFATLALFLNPRTAFWVGVGLVTALGGTLILMAAVDLTLNLLTMFGLIVVLGLLVDDAIVVAENIQATHERGVPPLEAAVVGAGQVGWPVVATVTTSVVAFLPLRFIDGEIGDLLGALPLVVACALIMSLIESLMILPSHMGHSLESADRRAERARRDAVRGGREARPGVVARYAAARDRFIENRVVPAYLGALGGVLHWRYAAVSAAVAALLFAFGMIGSRTVPFVFLPQNDAETLQLDLRLPLGSPMSATRAVVEGIEDAAVAMPDFRSIASVVGESASIDSAVSSGFAAHLAQMFIELEPVETRARTAPQIIEQLRRDIEPHLQVADRFSIEPISGGPGGPDLTLEVRGTDPGRIAAAVAEIKGQLRRFPGVVDVSDDNDAGLPESRFRVRDADAAAAGFTRADVATELRGLTFGLEPHSYAALREDIEVRVRGDAGTRRSQADVENAWIVSPTGRAVPVTEIADVVPGSAYASIKRIDRARTVTVTGYVTTGLSPETVAAELDLSAVREAYPDLEVRFGGRQEQTAEAFASLPYGAGAAAIMIYIILAWLFSKYLQPLAVMAVIPFATVGAVLGHWVMGYDLTFLSIIGLVALAGIVVNDSLIYVEFFNARRAAGEPIHEALLQAGAARLRAIFLTTVTTVLGLTPLILETSFQARFLIPMAISIAGGLIVATVLILGVLPCLLLILNDLTRIGRRAWHGPRVGEA
>NC_017080.1|WP_014438435.1|3643813_3644944_-|hypothetical-protein
MARRTRSCLLPLGAPRFLVHCVARCTRQLHMLADAGGGAASGGAAGCCEPAGLRKEILLARLEELVGVMAVEVIAFAVMDNHVHLVLRVSRAEAQRWSDEQVLRRWWRLHPLRDGYNRPREAAEEEVASALADAAFLAGCREKLASLSKFMQCFSQHAAERINKLEQTGGPVWAGRFKSVLVKDLEQLVATMVYVDLNPFAAGVCETPEEGRHTSLAGRLGRDEPCGAEAADPADPAATRRSGRSGRSADREPGEASTPDGPRPPRRRPSGRWLRPLDESLERQRRRGHRPLADGEAVRAASAGTVAAGLSLRAYLRVLDAVARKLRKGKRRLAAGTAGVFERLGLEADAVAGRVLALVAQHAVPPPRTVSAVSAG
>NC_017080.1|WP_014438436.1|3645063_3646290_-|putative-cardiolipin-synthase
MPERPVDEDSETGAASVPVTAENTRAVPRLQIAMTRAMGMPFFEGNRVTRIMNGEDIFEAMLGAIDGAELSIDLSAFIFWESEITERFIEALCDAARRGVRVRVLADGWGGHFVGDHMPGLLEDAGAQFAWFRPLKLKKGRDNFYRSHRRVLAIDNTVAFTGGVGFADHWTGDAEGWSRWRDSHFRIEGPAVEGLRAGFEEHWVEEEQADVSNLIERPTPMPAGPASLQVIRADTALQWNDIATAYQALVRAAAERLWISTAYFTPDPLLVNLIKEADGRGVDVRVMIPSLRQNDKWLATVAAEDTIRFFAGTGVRFYRYKPTMLHAKSMVIDDRGAVFGSANFNHRSMMTDDELIVVAVDTELNATLAADFETDLAECDPVDPADFERVSLKSRLARVLTRWKTSQV
>NC_017080.1|WP_014438437.1|3646578_3647649_+|sugar-phosphate-isomerase/epimerase
MPRPVTLFTGQWADLPLETLAADAKSYGYDGLELACWGDHFDVDQAEDPAYLAAKWELLGDHGLTCHAISMHLVGQAICDRIDERHRAILPPDVWGDGEPEGVRKRAAEKMALSARACRAFMDARPDGHSAAAVSEVRDGVPTRGVVNGFTGSSVWHSLYAFPPTDQAYWEAGFTDFANRFGPILDAFDAAEVNFALEVHPTEIAFDTASAARAVEAVNGHRRFGFNYDPSHLGYQAVDYVKFIRSFPDRIFHAHMKDVQWGVGVGDGTVGTFGGHTTFADPRRSWDFRSVGRGRIDFEQVVVALNDIGYTGPLSVEWEDSRMDRGHGAAESAAFVKKLDFPRSDIAFDGQFEKSE

Crispr_ID: NC_017080_14

• CRISPR_ID: NC_017080_14
• CRISPR_location: 3693441-3693559
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_017080_14

Consensus_repeat	Method
GCGGGTCGGGCGGGGGTTGGGTGAGAGACG	CRISPRCasFinder

spacers of NC_017080_14

>14.1|3693471|59|NC_017080|CRISPRCasFinder
GAGCGACGCTTGGGGGGGTTTCGTGCGGAGGGGCTGCATGGACCGCGAAGGTCTGTGCG

CRISPR arrays and Neighbor proteins around NC_017080_14

CRISPR arrays

The CRISPR arrays of NC_017080_14

>merge|NC_017080|14|3693441-3693559|CRISPRCasFinder
GCGGGTCGGGCGGGGGTTGGGTGAGAGACGGAGCGACGCTTGGGGGGGTTTCGTGCGGAGGGGCTGCATGGACCGCGAAGGTCTGTGCGGCGGGTCGGGCGGGGGGTGGGTGAGAGACG

>NC_017080|14|13|3693441-3693559|CRISPRCasFinder
GCGGGTCGGGCGGGGGTTGGGTGAGAGACG	GAGCGACGCTTGGGGGGGTTTCGTGCGGAGGGGCTGCATGGACCGCGAAGGTCTGTGCG
GCGGGTCGGGCGGGGGGTGGGTGAGAGACG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_017080.1|WP_014438482.1|3695433_3696360_-|site-specific-DNA-methyltransferase	unknown	unknown	gnl|CDD|183177
NC_017080.1|WP_154661911.1|3687362_3688724_+|SufS-family-cysteine-desulfurase	unknown	unknown	gnl|CDD|131034
NC_017080.1|WP_014438477.1|3689533_3690952_-|GTPase-and-DUF3482-domain-containing-protein	unknown	unknown	gnl|CDD|371831
NC_017080.1|WP_014438470.1|3683641_3684250_-|SMC-Scp-complex-subunit-ScpB	unknown	unknown	gnl|CDD|377219
NC_017080.1|WP_014438481.1|3694177_3695269_-|aldo/keto-reductase	unknown	unknown	gnl|CDD|381312
NC_017080.1|WP_014438480.1|3693681_3694158_+|sprT-domain-containing-protein	unknown	unknown	gnl|CDD|214794
NC_017080.1|WP_014438476.1|3688795_3689458_+|HAD-family-hydrolase	unknown	unknown	gnl|CDD|223620
NC_017080.1|WP_014438471.1|3684399_3684774_+|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl|CDD|234918
NC_017080.1|WP_014438489.1|3704526_3707298_+|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|223627
NC_017080.1|WP_014438485.1|3698139_3699162_+|DUF1559-domain-containing-protein	unknown	unknown	gnl|CDD|225076
NC_017080.1|WP_014438479.1|3691924_3693346_-|DUF2868-domain-containing-protein	unknown	unknown	gnl|CDD|378549
NC_017080.1|WP_014438484.1|3697597_3697999_+|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|294013
NC_017080.1|WP_014438478.1|3691046_3691904_+|serine/threonine-protein-phosphatase	unknown	unknown	gnl|CDD|369272
NC_017080.1|WP_014438473.1|3685879_3686509_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014438487.1|3702552_3703116_+|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|131644
NC_017080.1|WP_014438472.1|3684938_3685883_+|amidohydrolase-family-protein	unknown	unknown	gnl|CDD|225070
NC_017080.1|WP_014438486.1|3699270_3702453_+|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|271213
NC_017080.1|WP_014438483.1|3696747_3697137_+|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|173801
NC_017080.1|WP_014438474.1|3686551_3687364_-|DNA-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	unknown	unknown	gnl|CDD|223344
NC_017080.1|WP_014438488.1|3703318_3704467_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_017080.1|WP_014438482.1|3695433_3696360_-|site-specific-DNA-methyltransferase	gnl|CDD|183177	PRK11524, PRK11524, adenine-specific DNA-methyltransferase.	2.18278e-51
NC_017080.1|WP_154661911.1|3687362_3688724_+|SufS-family-cysteine-desulfurase	gnl|CDD|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NC_017080.1|WP_014438477.1|3689533_3690952_-|GTPase-and-DUF3482-domain-containing-protein	gnl|CDD|371831	pfam11981, DUF3482, Domain of unknown function (DUF3482). This presumed domain is functionally uncharacterized. This domain is found in bacteria and eukaryotes. This domain is typically between 289 to 301 amino acids in length. This domain is found associated with pfam01926. The central region of these proteins contains a hydrophobic region that is similar to pfam05433.	1.15639e-40
NC_017080.1|WP_014438470.1|3683641_3684250_-|SMC-Scp-complex-subunit-ScpB	gnl|CDD|377219	pfam04079, SMC_ScpB, Segregation and condensation complex subunit ScpB. This is a family of prokaryotic proteins that form one of the subunits, ScpB, of the segregation and condensation complex, condensin, that plays a key role in the maintenance of the chromosome. In prokaryotes the complex consists of three proteins, SMC, ScpA (kleisin) and ScpB. ScpB dimerizes and binds to ScpA. As originally predicted, ScpB is structurally a winged-helix at both its N- and C-terminal halves. IN Bacillus subtilis,one Smc dimer is bridged by a single ScpAB to generate asymmetric tripartite rings analogous to eukaryotic SMC complex ring-shaped assemblies.	1.34511e-57
NC_017080.1|WP_014438481.1|3694177_3695269_-|aldo/keto-reductase	gnl|CDD|381312	cd19086, AKR_AKR11C1, AKR11C family of aldo-keto reductase (AKR). Bacillus subtilis uncharacterized oxidoreductase YqkF is a founding member of aldo-keto reductase family 11 member C1 (AKR11C1). It may function as oxidoreductase. This family also includes Bacillus halodurans AKR11C1, an NADPH-dependent 4-hydroxy-2,3-trans-nonenal reductase.	1.47681e-78
NC_017080.1|WP_014438480.1|3693681_3694158_+|sprT-domain-containing-protein	gnl|CDD|214794	smart00731, SprT, SprT homologues. Predicted to have roles in transcription elongation. Contains a conserved HExxH motif, indicating a metalloprotease function.	4.99645e-10
NC_017080.1|WP_014438476.1|3688795_3689458_+|HAD-family-hydrolase	gnl|CDD|223620	COG0546, Gph, Predicted phosphatases [General function prediction only].	7.41231e-48
NC_017080.1|WP_014438471.1|3684399_3684774_+|glycine-cleavage-system-protein-GcvH	gnl|CDD|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	6.91573e-48
NC_017080.1|WP_014438489.1|3704526_3707298_+|DEAD/DEAH-box-helicase	gnl|CDD|223627	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair].	1.20284e-115
NC_017080.1|WP_014438485.1|3698139_3699162_+|DUF1559-domain-containing-protein	gnl|CDD|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	5.94806e-09
NC_017080.1|WP_014438479.1|3691924_3693346_-|DUF2868-domain-containing-protein	gnl|CDD|378549	pfam11067, DUF2868, Protein of unknown function (DUF2868). Some members in this family of proteins with unknown function are annotated as putative membrane proteins. However, this cannot be confirmed.	4.89329e-39
NC_017080.1|WP_014438484.1|3697597_3697999_+|winged-helix-turn-helix-transcriptional-regulator	gnl|CDD|294013	cd00383, trans_reg_C, DNA-binding effector domain of two-component system response regulators. Bacteria and some eukaryotes use two-component signal transduction systems to detect and respond to changes in the environment. The systems consists of a sensor histidine kinase and a response regulator. The former autophosphorylates a histidine residue on detecting an external stimulus. The phosphate is then transferred to an invariant aspartate residue in a highly conserved receiver domain of the response regulator. Phosphorylation activates a variable effector domain of the response regulator, which triggers the cellular response. This C-terminal effector domain belongs to the winged helix-turn-helix family of transcriptional regulators and contains DNA and RNA polymerase binding sites. Several dimers or monomers bind head to tail to small tandem repeats upstream of the genes. The RNA polymerase binding sites interact with the alpha or sigma subunit of RNA polymerase.	2.99735e-15
NC_017080.1|WP_014438478.1|3691046_3691904_+|serine/threonine-protein-phosphatase	gnl|CDD|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	1.17935e-44
NC_017080.1|WP_014438487.1|3702552_3703116_+|PEP-CTERM-sorting-domain-containing-protein	gnl|CDD|131644	TIGR02595, conserved_hypothetical_protein, PEP-CTERM protein-sorting domain. This model describes a 25-residue domain that includes a near-invariant Pro-Glu-Pro (PEP) motif, a thirteen residue strongly hydrophobic sequence likely to span the membrane, and a five-residue strongly basic motif that often contains four Arg residues. In nearly every case, this motif is found within nine residues, and usually within five residues, of the extreme C-terminus of the protein. Proteins with this motif typically have signal sequences at the N-terminus. This region appears many times per genome or not at all, and co-occurs in genomes with a proposed protein-sorting integral membrane protein we designate exosortase (see TIGR02602). PEP-CTERM proteins frequently are poorly conserved, Ser/Thr-rich proteins and may become extensively modified proteinaceous constituents of extracellular material in bacterial biofilms. [Cell envelope, Surface structures].	0.000821524
NC_017080.1|WP_014438472.1|3684938_3685883_+|amidohydrolase-family-protein	gnl|CDD|225070	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only].	3.05086e-22
NC_017080.1|WP_014438486.1|3699270_3702453_+|PEP-CTERM-sorting-domain-containing-protein	gnl|CDD|271213	cd14254, Dockerin_II, Type II dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type II dockerins, which are responsible for mediating attachment of the cellulosome complex to the bacterial cell wall.	0.00301794
NC_017080.1|WP_014438483.1|3696747_3697137_+|S8-family-serine-peptidase	gnl|CDD|173801	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases. Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	2.65646e-12
NC_017080.1|WP_014438474.1|3686551_3687364_-|DNA-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	gnl|CDD|223344	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair].	3.63326e-45
NC_017080.1|WP_014438488.1|3703318_3704467_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.17001e-42

Protein sequences

>NC_017080.1|WP_014438479.1|3691924_3693346_-|DUF2868-domain-containing-protein
MGSPRFHLPDLLALAIQDRRDADRSRRELLERDRPAAAPEAPADLLAWIRRVDRGEARAQALSLTRTAAWGAGGAGVLLGVGVASAALAYDGSRPVNVLVATLALAVLPLGFSVLSAVAMAWPTRRGGPAEAEPSPLTPGRWLVGLAARVPWLPTLWREVLTRPLHGLASERVLLGPTLRWWALTLSQVFGLGYAGAGLATAALLIATRDLAFGWGSTLDLDPARLHAVAEAAVWFAPGLCPGPATVEATRTYRAAAFRGVVDPELFTAWWPWLLAVQAAYGLAPRLVLGGVALGRRRAAVAAAAQTWPGADAVIRRLREPRVQTRAEAAPGEALPPPAAAEPAGPEAPAAEAAVTLSWAEAPAPAGALPVGGRRSLAEDRAAVATAADRAASAGPAAAVRVDVKAWEPPVLEFTDFLADLRAALGRGRPVRVTPRIRGVAGDTEDVAVWAGRLAAAGDPWTRLDPPAPADLP
>NC_017080.1|WP_014438478.1|3691046_3691904_+|serine/threonine-protein-phosphatase
MAPQEEIQKLKQELAEAEAARAEVEARDAKLQREVGQIARIHQALLPDQMPDVAGVRLAVRHAAPNRAGGDYYDVIPLQRDEALSAEASDPWLLIIADASGHGPAAAVIMAMIQAVLHGYRGDARGPGPVMSFVNAEMVKKAVPGSFTTAVLGLLDPRKSTFSYAIAGHHPPLLRREGEPVVELPSEEAGLPLGVAEDEGAGRHEIHPLRPGDAVLLYTDGAIETRNPAGEQFGLGRLKAALEAAAGTPDQQLDAVVGAIDAHRAGGPMEDDRTLLMFQAEATEP
>NC_017080.1|WP_014438477.1|3689533_3690952_-|GTPase-and-DUF3482-domain-containing-protein
MSVPRFAVVGHPNKGKSSIVATLARDDRVAVSPTPGTTTAADAYPMSVDGEVLYELVDTPGFQRSRRVLEDLQARAENAEERPAAVRAFLGDPATAGRYPDEHALLGAVMGERGGEPAGILYVVDGSAPYGPEYEAEMEVLRWTGAPSLGLINPFLSEAQGGEAAHAEAWERALGQYFRIVRVFDPLTADHAKRLDLLRAFGQMREAWRAPLDRAVEVLERDATGRREDACGVIARAVVAAMRFSAEKRLPPTGDPAAAKDELMRRYADGVRALEARSRDAVEDLYDFVRVEREEPAMDEAGVTGEDLFAEGSWSRFGATPAQLAATGAILGGGVGALADLHFAGLSMGLVAGAGALIGGATAWAGATQAAKMKVLGQDLGGRLARVGPSNNVNLAFVLLGRAKLHLAVVRQRTHARRDALVVPAAPEAGEAWSRADRAAVAAALKPVLKRPEDDAAAAASVRALRAWLLDG
>NC_017080.1|WP_014438476.1|3688795_3689458_+|HAD-family-hydrolase
MPRFDLALFDLDGTLINSLPDITAAGNHAMRTVGRPEITEQQCRFYAGQGLPNFIITALGPDHQDLYDAALAAHLGYYRDHGGTLTRVFPGVDGLLDRLKEAGLKRAILSNKPHAATLGDAERLLGRHAFDAVIGHRDGYEVKPDTRSATEIIERLGVEPDRVAYVGDTAADMLTAKRSGFYAVGVTYGFRERAELEEHGADAIVDDAAGVGDAILGTDR
>NC_017080.1|WP_154661911.1|3687362_3688724_+|SufS-family-cysteine-desulfurase
MAGRPYGAAGCRSKTGPPAERRHVRSGVPALAPPTSTAFDVDALRACFPILTREVHGKPLVYLDNAASAQKPDAVIDAVSEYYRQHHANVHRGLHVLAEEATALYEGARSAFARFINAGTPQECVFVRGATEAINLVAGSMTRPGHALSLRPGDRVLLTGMEHHSNIVPWQLACEATGAEIVVAGVLDDGSLDADAFQAHLDAGGVKIASFVWVSNALGTVNPAKALTAAAQAAGAAVLVDACQAAPHLKMDVADLGCDFLAVSGHKMFGPTGIGVLYGRAERLAAMPPYQGGGEMIQRVSFEKSTYADPPHRFEAGTPNMAGAAGLGAAVRFMEDELVSDPLVWEAAQAHEHALLERATRRLEAIEGLRILGTAPGKAAVVSFLVDGVHPYDLGPVLDRAGVAIRTGHHCTEPLMARFGVPATARASFAFYNTLDEADAFADALERGLRFFR
>NC_017080.1|WP_014438474.1|3686551_3687364_-|DNA-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase
MPEGHTIHRHARFQNLLLSGKRTASSSPQGRFAEDASVIDGCKLQRVEPLGKHLFYHYRPGVVHVHLGMYGRFKKIRRASGGWPEPTPAVRWRLTAPGSRVGVDLTGPTACELLEADEVAAIRKRIGVDLLGPAAAASRDAVRERMLGSVTPIGVALMDQRITSGIGNAYRAELLYRARLDPRTPGRRVDPAVFDAMYDDAVYLLKVGVRHRHILCVEPEAVGKRGWRELDADERFWVYRREACRGCGGPVEEIKQAGRSVYLCPREQRG
>NC_017080.1|WP_014438473.1|3685879_3686509_+|hypothetical-protein
MKRPPRLLGPLAAASALAAALLGGCASPSSLVVRGQATPGGPPVELVGDFDTAWYRTDDPNQATFVLLDGPPERPRQAAVIELFWRPRSGLTPVEPAATNMTVTHLVFAQRSAELGPGVDAGDRGELGVYAGAGFLFPRKPLGGRTLVAGVWDASLRLETRSEGFVDLLGLARMTGTFTATRDEGRVDELLRELSLETRDRLGFPRPLR
>NC_017080.1|WP_014438472.1|3684938_3685883_+|amidohydrolase-family-protein
MIVDLHTRIWNSVDSLGDAIAAQARRTREDASRAITASFDVHEVAMAPVSVAVVHGLDSHLLDARLDAGAVAAEVARSKDTLLGFVGLDPLGDDPTGRLHAAVDDHGCVGVNLCPAAGGFHPSATPTMELLEAVAERGLPVYVEAGAQLAREAKLEFAQPFLLDEVLRTFPEMKLVISGFGEPWPNQTVALLRKHPQAFTDVSGLVSRPWQLYNALVSAWQAGVMDQVLFGSGFPAADPERAIVTLYSVNSLTQGTPLPSIPREQLRGVVERDTLKILGLPDPTPEDAGDAKSSSAFARVVVESGPGEAGAERK
>NC_017080.1|WP_014438471.1|3684399_3684774_+|glycine-cleavage-system-protein-GcvH
MDTPDDRRYLPSHEWHRLLDDGTVEVGISAFAVDELTDITYVEASAAAGDRVAANEPFGEIESVKATSELYCGLDGTVTEINPAVIERPETINDDCYGTGWILRLKPDDAEQMSGLLEASAYAK
>NC_017080.1|WP_014438470.1|3683641_3684250_-|SMC-Scp-complex-subunit-ScpB
MEAAVGMQAQSAPAEASVERPAAADDPARLAARVEAALISAERAVPAGRLAEALGLEHSQPVNEAVAALNEAYQREGRAFRVEAVAGGFRVMTLPEHAAFLASLHRSRSSGRLSPAALETLAVVAYRQPVLRAELEAVRGAACGEVLRSLMERHLVRIAGRAEEVGRPILYGTTPRFLEVFGLASLAELPPADGAPKPGSGG
>NC_017080.1|WP_014438480.1|3693681_3694158_+|sprT-domain-containing-protein
MDLPSSGQLAERLMREHGLLPGAGQPRTRKHWTFGFNNRKRCLGLCRFDAKRIELSAAFVQRNDEPAVRDTVLHEIAHALAGARAGHGQAWRDACVRVGAKPERLDREADMPEGRWRAVCPGCGQVHTRHRRPARGARYHCRACGAARGPLVFAAGAP
>NC_017080.1|WP_014438481.1|3694177_3695269_-|aldo/keto-reductase
MQHRRIPGTDLEVSLLGFGNFVFGNNWWGDFSDTEAVRLQNRAVDLGVTFFDTAPAYGKGRAENLLGRTIADVGRDRLVISTKFGYPFATAKIEQDREEGKHREREQHWTPKDVRGEVEGSLGRLGTDRIDLYQAHNVKLDAYADDLFATLEALKDEGKIRAWGVALGPAIGWREEGQEALVARGADTVQTVFNLYEQDLGLELCEAATGLGRGGVIARVPTNSGILDEEFASADHKFAPHDHRKYRDRAWLVQGLKKNQILRERFGGPLGMSLRELSTRWLASQPGLVTIEPNLLSDRDLDDFAHACDGVPLEAETLAELRALYLDDFGLGEAAHPCDFKSSVAEGGSLRAGYVEPALAADA
>NC_017080.1|WP_014438482.1|3695433_3696360_-|site-specific-DNA-methyltransferase
MPETATPPENTILLGDCIEAVNALPEGCVDLVFADPPYNIGFGYDGHYEDDKTDEQYLGWTCDWIDACTRALAPSGSMYILIGDEYAAETRVHLKKLERAGKLLFRNWIVWHYSFGQRCKAKFNRSHAHLFYCVGSAALNPRTGKPRADLVRNPPFTFHYDQVAVPSARMTTYNDARTNPKGKLPDDTWVLKGSGVSFAHAEAWHTRPQPAQEQDGAFAEDSDTWFQSRLCGSFKEREAWHPCQLPEALLQRIVSASSNPGDLVLDPFAGSGTTLAVANRLGRRWLGCELSPDYREKALERIARHGGA
>NC_017080.1|WP_014438483.1|3696747_3697137_+|S8-family-serine-peptidase
MAPDVRSLNGRGLDEHNAFYNGNEIVKATGFTVDLGADVLNLSLGYGNSSSDASSLLSRNAVAITWERGIPVVASAGNKGRNRPSATPNSSSQGPGDAFNAFSVAASDADFDRIADFSSWSETQSAPRA
>NC_017080.1|WP_014438484.1|3697597_3697999_+|winged-helix-turn-helix-transcriptional-regulator
MEAPVPAGDEEAVLRVGAVVVRPESFRVSVAGERVGFTAAEVRAVALLARRPGWTFSPAQLHAAAHGQASAVGPASGAAKTLVHRLRRKLGPAAARQLQSVRGVGYRLVEASEPGASGAPEALGAADALPRRD
>NC_017080.1|WP_014438485.1|3698139_3699162_+|DUF1559-domain-containing-protein
MIRRTGPAFTLIELLVVISIIALLIGILLPALGAARGAARSSVCSSNLRQVGIAMTTYNAESKDHYPASYVYPTSTWNGTGGGRPFRWNLTDQVSAGISSTGYVHWSFALIDSDTLGQEGFQCPELEEGGHPATNPAPGFERADQTREVPSVDRQVNRLAYAANELIIPRNKFNDKAFGKERNNRFVKASELRAASNEILATELFENFDRIKNGAGNISKSHRSLNPIQSISGGAGNPTGYARDQVIRDIRGAGDPDRYGLADYDDLLQNSPTPNITSEPMNAVGRHHPGDNGPSGGGTANFVYADGHVETTGVAYTLANKKWGERFYSLTGNQQIRYQW
>NC_017080.1|WP_014438486.1|3699270_3702453_+|PEP-CTERM-sorting-domain-containing-protein
MPVTPSSPRSAPSAARRTAVLLAASCASFGGAGSAFADEVTVTGATLFEEFFKVAANASDFIDADNDGVITDFTANGGVGTVDILYGGANPFFAQQYRAIGSGNGFQELINYGSVNGPGSSFAAINALNGGAPNVRNTGEVPIGNFTGPATADIATLDVPASWFVTDTSAQGRWDLAPRTGSGATPGYGNGQAVSNPVYGTTADPLQAGGQGNTLKSLTPSSNSAAPGTQTLNTNTGSPDANTLFETQLALSPIAFVANAGAAVDSTTSTGAADGNIKKSELQHLFVTGRTVSGENLVAITRDSGSGTRNGAMNSIGVDPSWGTGDNVGRKNKGSGDDLDTPGPDYIPTNKNSSSRLENTVQNTRLGVSYNGIVGNAGPDSVGNRYEILNVANDLDATWDGTSYVRPQMTDDAGNNVVFNDDANTGHQIGATQTFVTIGDPFAGDIHVDGSGNIVAGPGTGIKTFAGNGSGNPEMADKKAALYIRNIQESIDAFVAAPTNPATEGTPGEYLASNFALVNAASALADPTAPGTFITNVNTNPDLQQVGVLPTEAIEASYGGDHGTVPNRDSGTIYTDGQSANYLTNGGTAVNYASTLAAGTAIGEANAIAGDFDGDQVRDTDDIDDMVAAAEAAASGFAARAALGQDDQVLEIIGDFNADGNFDAEDVRYGADGLFTRGRSSGTLDRAANFAEVDAASTSGNFFGTTLATGKAYAAGDARGDIAGSGDIAAGANPLGADGTVAAEDIDAVYENFVGLNLDATAGVQWSNIEEIANAVNAKGSRVDLSADMNGDLTIDQTDVDAVVRGILGTEYGDANLDRTVGAADVSVLSGNFGQAAGWAGGSFDGDGQVGAADVSVLSGNFGFEGSGSNALAFASAVAPAVGSAVSAPAAVDAREVAAPSGDAVAFELQVGALADGFDTIETIIELTAGTIVADADATASLLAEGDDESGFSAFLTAPAAFGGKGLSEFGYTEQPTLLSATYASLGNNSAASSDVLLAQILLGQSLSETAGTYTVNLFDNGILQDTLTASFGGFVIPEPATAAVLGLGGLTLLRRRRNA
>NC_017080.1|WP_014438487.1|3702552_3703116_+|PEP-CTERM-sorting-domain-containing-protein
MKFLLPALAAFAAASPAAGASLQIDAGPTIGGFDAFAFTLLPEQLDGGFDTIETIVTATSGSFLTDSDTAASLLNVGDDETSFSAFLTAPSAFGGKGLSEFGYTEQSALLSGTYASLGNNSASEGDVLLSQVAFAAGTPGSGTVRVNLFDNGLVVDQITESFVVPEPASLALLAAGGVAILGRRRAA
>NC_017080.1|WP_014438488.1|3703318_3704467_+|Gfo/Idh/MocA-family-oxidoreductase
MSNPSPHRVGLGVIGLGGFARFSLQHFVQAPGVELVAAGGVTSDEARHAAARYGIPVLESNDELCAHPGIDWVYINTPPFLHFEHAMLALRAGKHVLIEKPLATEIGHAEALMVEADERGLRLVTNLMQRYNPLLETLGTVLREGLLGAPLFFNLTNHAVDQGLPSGHWFWDRDKSGGIFVEHGVHFFDMATMLLGPGRIDSAGSARRASDGAEDQVWCDGRFGSAIARFYHGFNQTAATEAQRFEIVCERGQITMEGWIPLAATITATVDLAATRRLTELAPAARLRVLEQFPPDRQEVRGHGRMHRVDQSIRLDVPPASPKSELYGELLQRLFTEQTAPDAASNSNSLRLQPDDGLESLRLAIAARDLADAADAADPPED
>NC_017080.1|WP_014438489.1|3704526_3707298_+|DEAD/DEAH-box-helicase
MLIEPYVTPAGALAVREAEGGETAPSVAAAKRLLTAADAEAGGGSGAALLELGAGWADAELGPRLGWLRAFARAALTAWCRAAAQEAGAVETPSEAALAERVTHAPPLAGGEYLRPETLAAWWEQTGVALHAAADAAGLPIGEYLASRHASWRAVGRVTFHLAENQRDEARPFAFLATYADGPAPDGTPRHRPLGKAIETSAGSGDRATLLGLLTPIYRAAERADWLREAVVSGAVYRPLAWTTGEAYAFLRSVDTLQAAGLAVRTPDWWSAKKRPRPTVSVQVGGTKGGAVNTASLLSFSVSVTLEGETLSPEEMDELLSGGGGDAAGLVRLRGRWVELDRDRLGAALDHWKEVEAAHAEGVGFSEAMRWMSGAQAVAEEQEPSAGADPEDPAAWVGIEPGPWLEETLATLRDPACLAPAEMPGLKARLRPYQATGVGWLGFMSRLKLGACLADDMGLGKTLQVLALLLRMKRADAEAGPDANLPPSPSPPPSLLVVPASLLANWAAERDRFAPSLQSVTLHPAESAVDLKDAGAVKRAVAGVDLAITTYGMLTRLDVLRELPWRLVVLDEAQAIKNSGTRQTHAVKKLTAESRVVLTGTPVENRLSDLWSLFDFLNPGLLGSAAAFKRLVKQMGGDDDRPADYAPLRRLVGPYILRRLKTDKSVIADLPEKTEVQAWCGLSKPQAKLYQASVDEMARELREGERAGIHRRGLVLGFLTRFKQVCNHPAQFHGTGAYAAEESGKFLRLRSLCEEIAARQERVLVFTQFREVTAPLAEQLGEVFGRSGLVLHGGTPVKKRQQMVQRFQAADGPPFLVLSLKAGGTGLNLTAASHVVHFDRWWNPAVENQATDRAFRIGQKRNVLVHKFVCRGTIEEKIDAMIQEKTAVADAVLGGEAEKRLTEMDDVELLDFVKLDVARAGEL

Crispr_ID: NC_017080_15

• CRISPR_ID: NC_017080_15
• CRISPR_location: 3701740-3701858
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_017080_15

Consensus_repeat	Method
GCCGACGTGAGCGTGCTCTCCGGCAACTTCGG	CRISPRCasFinder

spacers of NC_017080_15

>15.1|3701772|55|NC_017080|CRISPRCasFinder
GCAGGCGGCCGGCTGGGCCGGCGGCAGCTTCGACGGCGACGGCCAGGTGGGCGCC

CRISPR arrays and Neighbor proteins around NC_017080_15

CRISPR arrays

The CRISPR arrays of NC_017080_15

>merge|NC_017080|15|3701740-3701858|CRISPRCasFinder
GCCGACGTGAGCGTGCTCTCCGGCAACTTCGGGCAGGCGGCCGGCTGGGCCGGCGGCAGCTTCGACGGCGACGGCCAGGTGGGCGCCGCCGACGTGAGCGTGCTCTCGGGCAACTTCGG

>NC_017080|15|14|3701740-3701858|CRISPRCasFinder
GCCGACGTGAGCGTGCTCTCCGGCAACTTCGG	GCAGGCGGCCGGCTGGGCCGGCGGCAGCTTCGACGGCGACGGCCAGGTGGGCGCC
GCCGACGTGAGCGTGCTCTCGGGCAACTTCGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_017080.1|WP_014438482.1|3695433_3696360_-|site-specific-DNA-methyltransferase	unknown	unknown	gnl|CDD|183177
NC_017080.1|WP_014438496.1|3712982_3713885_+|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	unknown
NC_017080.1|WP_014438477.1|3689533_3690952_-|GTPase-and-DUF3482-domain-containing-protein	unknown	unknown	gnl|CDD|371831
NC_017080.1|WP_014438487.1|3702552_3703116_+|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|131644
NC_017080.1|WP_014438491.1|3708516_3710217_+|DUF262-domain-containing-protein	unknown	unknown	gnl|CDD|226003
NC_017080.1|WP_014438481.1|3694177_3695269_-|aldo/keto-reductase	unknown	unknown	gnl|CDD|381312
NC_017080.1|WP_014438490.1|3707335_3708385_+|SWIM-zinc-finger-family-protein	unknown	unknown	gnl|CDD|226729
NC_017080.1|WP_014438480.1|3693681_3694158_+|sprT-domain-containing-protein	unknown	unknown	gnl|CDD|214794
NC_017080.1|WP_014438476.1|3688795_3689458_+|HAD-family-hydrolase	unknown	unknown	gnl|CDD|223620
NC_017080.1|WP_014438488.1|3703318_3704467_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_017080.1|WP_014438485.1|3698139_3699162_+|DUF1559-domain-containing-protein	unknown	unknown	gnl|CDD|225076
NC_017080.1|WP_014438479.1|3691924_3693346_-|DUF2868-domain-containing-protein	unknown	unknown	gnl|CDD|378549
NC_017080.1|WP_014438484.1|3697597_3697999_+|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|294013
NC_017080.1|WP_014438478.1|3691046_3691904_+|serine/threonine-protein-phosphatase	unknown	unknown	gnl|CDD|369272
NC_017080.1|WP_041378175.1|3721404_3722112_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014438500.1|3722826_3723525_+|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_041378174.1|3713947_3714757_-|hypothetical-protein	unknown	unknown	unknown
NC_017080.1|WP_014438483.1|3696747_3697137_+|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|173801
NC_017080.1|WP_014438489.1|3704526_3707298_+|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|223627
NC_017080.1|WP_014438498.1|3715446_3721128_-|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl|CDD|350769

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_017080.1|WP_014438482.1|3695433_3696360_-|site-specific-DNA-methyltransferase	gnl|CDD|183177	PRK11524, PRK11524, adenine-specific DNA-methyltransferase.	2.18278e-51
NC_017080.1|WP_014438477.1|3689533_3690952_-|GTPase-and-DUF3482-domain-containing-protein	gnl|CDD|371831	pfam11981, DUF3482, Domain of unknown function (DUF3482). This presumed domain is functionally uncharacterized. This domain is found in bacteria and eukaryotes. This domain is typically between 289 to 301 amino acids in length. This domain is found associated with pfam01926. The central region of these proteins contains a hydrophobic region that is similar to pfam05433.	1.15639e-40
NC_017080.1|WP_014438487.1|3702552_3703116_+|PEP-CTERM-sorting-domain-containing-protein	gnl|CDD|131644	TIGR02595, conserved_hypothetical_protein, PEP-CTERM protein-sorting domain. This model describes a 25-residue domain that includes a near-invariant Pro-Glu-Pro (PEP) motif, a thirteen residue strongly hydrophobic sequence likely to span the membrane, and a five-residue strongly basic motif that often contains four Arg residues. In nearly every case, this motif is found within nine residues, and usually within five residues, of the extreme C-terminus of the protein. Proteins with this motif typically have signal sequences at the N-terminus. This region appears many times per genome or not at all, and co-occurs in genomes with a proposed protein-sorting integral membrane protein we designate exosortase (see TIGR02602). PEP-CTERM proteins frequently are poorly conserved, Ser/Thr-rich proteins and may become extensively modified proteinaceous constituents of extracellular material in bacterial biofilms. [Cell envelope, Surface structures].	0.000821524
NC_017080.1|WP_014438491.1|3708516_3710217_+|DUF262-domain-containing-protein	gnl|CDD|226003	COG3472, COG3472, Uncharacterized conserved protein [Function unknown].	5.45781e-35
NC_017080.1|WP_014438481.1|3694177_3695269_-|aldo/keto-reductase	gnl|CDD|381312	cd19086, AKR_AKR11C1, AKR11C family of aldo-keto reductase (AKR). Bacillus subtilis uncharacterized oxidoreductase YqkF is a founding member of aldo-keto reductase family 11 member C1 (AKR11C1). It may function as oxidoreductase. This family also includes Bacillus halodurans AKR11C1, an NADPH-dependent 4-hydroxy-2,3-trans-nonenal reductase.	1.47681e-78
NC_017080.1|WP_014438490.1|3707335_3708385_+|SWIM-zinc-finger-family-protein	gnl|CDD|226729	COG4279, COG4279, Uncharacterized conserved protein [Function unknown].	2.4413e-29
NC_017080.1|WP_014438480.1|3693681_3694158_+|sprT-domain-containing-protein	gnl|CDD|214794	smart00731, SprT, SprT homologues. Predicted to have roles in transcription elongation. Contains a conserved HExxH motif, indicating a metalloprotease function.	4.99645e-10
NC_017080.1|WP_014438476.1|3688795_3689458_+|HAD-family-hydrolase	gnl|CDD|223620	COG0546, Gph, Predicted phosphatases [General function prediction only].	7.41231e-48
NC_017080.1|WP_014438488.1|3703318_3704467_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.17001e-42
NC_017080.1|WP_014438485.1|3698139_3699162_+|DUF1559-domain-containing-protein	gnl|CDD|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	5.94806e-09
NC_017080.1|WP_014438479.1|3691924_3693346_-|DUF2868-domain-containing-protein	gnl|CDD|378549	pfam11067, DUF2868, Protein of unknown function (DUF2868). Some members in this family of proteins with unknown function are annotated as putative membrane proteins. However, this cannot be confirmed.	4.89329e-39
NC_017080.1|WP_014438484.1|3697597_3697999_+|winged-helix-turn-helix-transcriptional-regulator	gnl|CDD|294013	cd00383, trans_reg_C, DNA-binding effector domain of two-component system response regulators. Bacteria and some eukaryotes use two-component signal transduction systems to detect and respond to changes in the environment. The systems consists of a sensor histidine kinase and a response regulator. The former autophosphorylates a histidine residue on detecting an external stimulus. The phosphate is then transferred to an invariant aspartate residue in a highly conserved receiver domain of the response regulator. Phosphorylation activates a variable effector domain of the response regulator, which triggers the cellular response. This C-terminal effector domain belongs to the winged helix-turn-helix family of transcriptional regulators and contains DNA and RNA polymerase binding sites. Several dimers or monomers bind head to tail to small tandem repeats upstream of the genes. The RNA polymerase binding sites interact with the alpha or sigma subunit of RNA polymerase.	2.99735e-15
NC_017080.1|WP_014438478.1|3691046_3691904_+|serine/threonine-protein-phosphatase	gnl|CDD|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	1.17935e-44
NC_017080.1|WP_014438483.1|3696747_3697137_+|S8-family-serine-peptidase	gnl|CDD|173801	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases. Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	2.65646e-12
NC_017080.1|WP_014438489.1|3704526_3707298_+|DEAD/DEAH-box-helicase	gnl|CDD|223627	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair].	1.20284e-115
NC_017080.1|WP_014438498.1|3715446_3721128_-|DEAD/DEAH-box-helicase-family-protein	gnl|CDD|350769	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	3.26867e-41

Protein sequences

>NC_017080.1|WP_014438485.1|3698139_3699162_+|DUF1559-domain-containing-protein
MIRRTGPAFTLIELLVVISIIALLIGILLPALGAARGAARSSVCSSNLRQVGIAMTTYNAESKDHYPASYVYPTSTWNGTGGGRPFRWNLTDQVSAGISSTGYVHWSFALIDSDTLGQEGFQCPELEEGGHPATNPAPGFERADQTREVPSVDRQVNRLAYAANELIIPRNKFNDKAFGKERNNRFVKASELRAASNEILATELFENFDRIKNGAGNISKSHRSLNPIQSISGGAGNPTGYARDQVIRDIRGAGDPDRYGLADYDDLLQNSPTPNITSEPMNAVGRHHPGDNGPSGGGTANFVYADGHVETTGVAYTLANKKWGERFYSLTGNQQIRYQW
>NC_017080.1|WP_014438484.1|3697597_3697999_+|winged-helix-turn-helix-transcriptional-regulator
MEAPVPAGDEEAVLRVGAVVVRPESFRVSVAGERVGFTAAEVRAVALLARRPGWTFSPAQLHAAAHGQASAVGPASGAAKTLVHRLRRKLGPAAARQLQSVRGVGYRLVEASEPGASGAPEALGAADALPRRD
>NC_017080.1|WP_014438483.1|3696747_3697137_+|S8-family-serine-peptidase
MAPDVRSLNGRGLDEHNAFYNGNEIVKATGFTVDLGADVLNLSLGYGNSSSDASSLLSRNAVAITWERGIPVVASAGNKGRNRPSATPNSSSQGPGDAFNAFSVAASDADFDRIADFSSWSETQSAPRA
>NC_017080.1|WP_014438482.1|3695433_3696360_-|site-specific-DNA-methyltransferase
MPETATPPENTILLGDCIEAVNALPEGCVDLVFADPPYNIGFGYDGHYEDDKTDEQYLGWTCDWIDACTRALAPSGSMYILIGDEYAAETRVHLKKLERAGKLLFRNWIVWHYSFGQRCKAKFNRSHAHLFYCVGSAALNPRTGKPRADLVRNPPFTFHYDQVAVPSARMTTYNDARTNPKGKLPDDTWVLKGSGVSFAHAEAWHTRPQPAQEQDGAFAEDSDTWFQSRLCGSFKEREAWHPCQLPEALLQRIVSASSNPGDLVLDPFAGSGTTLAVANRLGRRWLGCELSPDYREKALERIARHGGA
>NC_017080.1|WP_014438481.1|3694177_3695269_-|aldo/keto-reductase
MQHRRIPGTDLEVSLLGFGNFVFGNNWWGDFSDTEAVRLQNRAVDLGVTFFDTAPAYGKGRAENLLGRTIADVGRDRLVISTKFGYPFATAKIEQDREEGKHREREQHWTPKDVRGEVEGSLGRLGTDRIDLYQAHNVKLDAYADDLFATLEALKDEGKIRAWGVALGPAIGWREEGQEALVARGADTVQTVFNLYEQDLGLELCEAATGLGRGGVIARVPTNSGILDEEFASADHKFAPHDHRKYRDRAWLVQGLKKNQILRERFGGPLGMSLRELSTRWLASQPGLVTIEPNLLSDRDLDDFAHACDGVPLEAETLAELRALYLDDFGLGEAAHPCDFKSSVAEGGSLRAGYVEPALAADA
>NC_017080.1|WP_014438480.1|3693681_3694158_+|sprT-domain-containing-protein
MDLPSSGQLAERLMREHGLLPGAGQPRTRKHWTFGFNNRKRCLGLCRFDAKRIELSAAFVQRNDEPAVRDTVLHEIAHALAGARAGHGQAWRDACVRVGAKPERLDREADMPEGRWRAVCPGCGQVHTRHRRPARGARYHCRACGAARGPLVFAAGAP
>NC_017080.1|WP_014438479.1|3691924_3693346_-|DUF2868-domain-containing-protein
MGSPRFHLPDLLALAIQDRRDADRSRRELLERDRPAAAPEAPADLLAWIRRVDRGEARAQALSLTRTAAWGAGGAGVLLGVGVASAALAYDGSRPVNVLVATLALAVLPLGFSVLSAVAMAWPTRRGGPAEAEPSPLTPGRWLVGLAARVPWLPTLWREVLTRPLHGLASERVLLGPTLRWWALTLSQVFGLGYAGAGLATAALLIATRDLAFGWGSTLDLDPARLHAVAEAAVWFAPGLCPGPATVEATRTYRAAAFRGVVDPELFTAWWPWLLAVQAAYGLAPRLVLGGVALGRRRAAVAAAAQTWPGADAVIRRLREPRVQTRAEAAPGEALPPPAAAEPAGPEAPAAEAAVTLSWAEAPAPAGALPVGGRRSLAEDRAAVATAADRAASAGPAAAVRVDVKAWEPPVLEFTDFLADLRAALGRGRPVRVTPRIRGVAGDTEDVAVWAGRLAAAGDPWTRLDPPAPADLP
>NC_017080.1|WP_014438478.1|3691046_3691904_+|serine/threonine-protein-phosphatase
MAPQEEIQKLKQELAEAEAARAEVEARDAKLQREVGQIARIHQALLPDQMPDVAGVRLAVRHAAPNRAGGDYYDVIPLQRDEALSAEASDPWLLIIADASGHGPAAAVIMAMIQAVLHGYRGDARGPGPVMSFVNAEMVKKAVPGSFTTAVLGLLDPRKSTFSYAIAGHHPPLLRREGEPVVELPSEEAGLPLGVAEDEGAGRHEIHPLRPGDAVLLYTDGAIETRNPAGEQFGLGRLKAALEAAAGTPDQQLDAVVGAIDAHRAGGPMEDDRTLLMFQAEATEP
>NC_017080.1|WP_014438477.1|3689533_3690952_-|GTPase-and-DUF3482-domain-containing-protein
MSVPRFAVVGHPNKGKSSIVATLARDDRVAVSPTPGTTTAADAYPMSVDGEVLYELVDTPGFQRSRRVLEDLQARAENAEERPAAVRAFLGDPATAGRYPDEHALLGAVMGERGGEPAGILYVVDGSAPYGPEYEAEMEVLRWTGAPSLGLINPFLSEAQGGEAAHAEAWERALGQYFRIVRVFDPLTADHAKRLDLLRAFGQMREAWRAPLDRAVEVLERDATGRREDACGVIARAVVAAMRFSAEKRLPPTGDPAAAKDELMRRYADGVRALEARSRDAVEDLYDFVRVEREEPAMDEAGVTGEDLFAEGSWSRFGATPAQLAATGAILGGGVGALADLHFAGLSMGLVAGAGALIGGATAWAGATQAAKMKVLGQDLGGRLARVGPSNNVNLAFVLLGRAKLHLAVVRQRTHARRDALVVPAAPEAGEAWSRADRAAVAAALKPVLKRPEDDAAAAASVRALRAWLLDG
>NC_017080.1|WP_014438476.1|3688795_3689458_+|HAD-family-hydrolase
MPRFDLALFDLDGTLINSLPDITAAGNHAMRTVGRPEITEQQCRFYAGQGLPNFIITALGPDHQDLYDAALAAHLGYYRDHGGTLTRVFPGVDGLLDRLKEAGLKRAILSNKPHAATLGDAERLLGRHAFDAVIGHRDGYEVKPDTRSATEIIERLGVEPDRVAYVGDTAADMLTAKRSGFYAVGVTYGFRERAELEEHGADAIVDDAAGVGDAILGTDR
>NC_017080.1|WP_014438487.1|3702552_3703116_+|PEP-CTERM-sorting-domain-containing-protein
MKFLLPALAAFAAASPAAGASLQIDAGPTIGGFDAFAFTLLPEQLDGGFDTIETIVTATSGSFLTDSDTAASLLNVGDDETSFSAFLTAPSAFGGKGLSEFGYTEQSALLSGTYASLGNNSASEGDVLLSQVAFAAGTPGSGTVRVNLFDNGLVVDQITESFVVPEPASLALLAAGGVAILGRRRAA
>NC_017080.1|WP_014438488.1|3703318_3704467_+|Gfo/Idh/MocA-family-oxidoreductase
MSNPSPHRVGLGVIGLGGFARFSLQHFVQAPGVELVAAGGVTSDEARHAAARYGIPVLESNDELCAHPGIDWVYINTPPFLHFEHAMLALRAGKHVLIEKPLATEIGHAEALMVEADERGLRLVTNLMQRYNPLLETLGTVLREGLLGAPLFFNLTNHAVDQGLPSGHWFWDRDKSGGIFVEHGVHFFDMATMLLGPGRIDSAGSARRASDGAEDQVWCDGRFGSAIARFYHGFNQTAATEAQRFEIVCERGQITMEGWIPLAATITATVDLAATRRLTELAPAARLRVLEQFPPDRQEVRGHGRMHRVDQSIRLDVPPASPKSELYGELLQRLFTEQTAPDAASNSNSLRLQPDDGLESLRLAIAARDLADAADAADPPED
>NC_017080.1|WP_014438489.1|3704526_3707298_+|DEAD/DEAH-box-helicase
MLIEPYVTPAGALAVREAEGGETAPSVAAAKRLLTAADAEAGGGSGAALLELGAGWADAELGPRLGWLRAFARAALTAWCRAAAQEAGAVETPSEAALAERVTHAPPLAGGEYLRPETLAAWWEQTGVALHAAADAAGLPIGEYLASRHASWRAVGRVTFHLAENQRDEARPFAFLATYADGPAPDGTPRHRPLGKAIETSAGSGDRATLLGLLTPIYRAAERADWLREAVVSGAVYRPLAWTTGEAYAFLRSVDTLQAAGLAVRTPDWWSAKKRPRPTVSVQVGGTKGGAVNTASLLSFSVSVTLEGETLSPEEMDELLSGGGGDAAGLVRLRGRWVELDRDRLGAALDHWKEVEAAHAEGVGFSEAMRWMSGAQAVAEEQEPSAGADPEDPAAWVGIEPGPWLEETLATLRDPACLAPAEMPGLKARLRPYQATGVGWLGFMSRLKLGACLADDMGLGKTLQVLALLLRMKRADAEAGPDANLPPSPSPPPSLLVVPASLLANWAAERDRFAPSLQSVTLHPAESAVDLKDAGAVKRAVAGVDLAITTYGMLTRLDVLRELPWRLVVLDEAQAIKNSGTRQTHAVKKLTAESRVVLTGTPVENRLSDLWSLFDFLNPGLLGSAAAFKRLVKQMGGDDDRPADYAPLRRLVGPYILRRLKTDKSVIADLPEKTEVQAWCGLSKPQAKLYQASVDEMARELREGERAGIHRRGLVLGFLTRFKQVCNHPAQFHGTGAYAAEESGKFLRLRSLCEEIAARQERVLVFTQFREVTAPLAEQLGEVFGRSGLVLHGGTPVKKRQQMVQRFQAADGPPFLVLSLKAGGTGLNLTAASHVVHFDRWWNPAVENQATDRAFRIGQKRNVLVHKFVCRGTIEEKIDAMIQEKTAVADAVLGGEAEKRLTEMDDVELLDFVKLDVARAGEL
>NC_017080.1|WP_014438490.1|3707335_3708385_+|SWIM-zinc-finger-family-protein
MSYYGYQHFAPAPTVAQLRAKGERACAKLRKTNPGIEPVHIEGRTIARTFWGRAWCDNLEAYRDFAYRLERGRKYVRHRCVVDLSIRGGRVGAVVQGSSLYDVRVEVEPLPEARWTQLKGATVGQIGSAIDLLKGELSDAVIQRLIDLDTGLFPAPAEIRMSCSCPDGAGCCKHVAAALYGVGHRLDTKPDLLFVLRNLDPAELIAHAASADALTGGSGPGSAAELAGEDLDDIFGLSLGQEEKDSAPSAKRKPATEAPAKKKTKKKPAAMKAARKKPAAAAKAAKKKPSPKKKPLAKKYPGKSSEPAPPVRKKATKKAAATKSTAKKPTTKKKAAPKKAVKRSSTPRC
>NC_017080.1|WP_014438491.1|3708516_3710217_+|DUF262-domain-containing-protein
MQQPEPQSRNLDSFLHEIDKGAIKIPLFQRDFVWERAKSAALLDSVLKGYPVGTFILWKTKERMRSVRDIGGVPLPELPEGETVEQVLDGQQRLTSLYAAVKGLSIQRGKRVDDFGEIVLDLDADPDGIQPLVLPRVPASDEQDETPDADRYAPVASLQDKKLFALLGSLDPARSERLLMLRDRLSKYRFSMIIVGEAPLSTATEIFTRINVTGKALTVFEIMAAKTYNEKTGFDLAERFDRFREDLDGVGYGLISGVSMLQLTSLLLTEHGSATREDILNLPPAGFPAAWERAVSAAEAAVDHFRQVMRVPVSRLLPYGSLIVPFGFFFAHHPANANGHERKALEEFFFRVALTGRYTSAVETKLASDARIIAMIARGEEPAFDRTFAAETSAASIERRGTFRTSGSYVKALLAVLAAQGPRSFSNDAAVTLGNDWLKQANSRNYHHFFPKAFLTKQGVARERANHTANITLVDDFLNKRVIRAQPPSEYLPRFREENPDLDATLRSHLIEPGPELSTDDYGRFFRRRCERLSKELAMRVPRRSIDDGLSGPRDADDVDPEDADA
>NC_017080.1|WP_014438496.1|3712982_3713885_+|PEP-CTERM-sorting-domain-containing-protein
MRRRHTFAGSASAALLAVAAGGAASAAVVPAFDLVDDFLKVGGNYNGPGLYDVFDAATGLAVADGVADIAVSVTATGLTADDGNNVSWVATTGTSGTGLVSTIDPSFVSGGGVLANNGGHRVTQTIQIDFLTLLVEASDVTDLSWSSGNSAGVVWEHSVMEFLDAGGNPFSPTPAIGSYATHTPVEGSASAGNYVADGLGSVTAVGTDLTVPGSNGSMDAITGSEPDTPAATGVAPATTLIGGIRFTHGVEDVRGVDNGDTVFTNTINDLDLVDFEVVPEPASALLLATGALLILTGRRN
>NC_017080.1|WP_041378174.1|3713947_3714757_-|hypothetical-protein
MHRLAPRASLASLAAALSLAAPTALSQDRSGGSEPQRDTERVEIKRASTWGFSNEVRVKLSAAYDALYRDPEEAVKELRLAVSLAEILGAAASSGGGEELRAAAAELSRFTQEVQNRTRVNPDDLSGPGAAVTLGIARVQLAEARAGLERGDESMFAYSLDSAAANLLQAHVYRKQAPGEDAARAIFNADRLAEQVEALIHPTTQQGGVFAVSVPEEDTDTEDIGLLEDAGGGDGGGEDRSMAEKIPSIAAEVLDALDTALNAAAQASN
>NC_017080.1|WP_014438498.1|3715446_3721128_-|DEAD/DEAH-box-helicase-family-protein
MALQSAPPELSLKRPVLQASESRQWHRLRRAALEWGLADPIVLHSEQDIKGGWYHDPKRDWNPFEHQVENLIASLRRLPVAVLADDVGLGKTISAGMILSELMVRGRVQRTLVVCPKILQRQWVEELGKKFKLKATAATGSELTYELRNQRAEVVVTTYHTISRVLERGSVPEGAFQMLILDEAHKLRNLHGTPKPPKMAVNIQKALKDRLFPHMLLLTATPMQNRITDLYSLLDLAAAAEGRQHPLGHIDDFRFEYLLDGAMSQRGLRLRPDKEEAFHGAVRRTLRRTRRVDVKLNFPSRDIESRTLKPRRVEKEMIKLVREVSETLSYFEALSLCRAMMSSPHALATQVANSKGDWATKQVEDRAYNLCENDPVTSKMAGLLALVDELAAKRPEDWRLVVFTLRVATQDAIGRMLRLRGVSHGFIRGGTPEANAKAVEAYTGEEGKPPSIHVLVSTDSGAEGVNLQAGNVILNFDLPWNPMVLEQRIGRVQRMGSTYERVEVVNLAVEETSEEMVVKLLTLKLEGVNAALGDIEAILDFNGDPDGEGFEKRIGEIVMGSLRQSDQTEAFRREFESQERAKKIYAEVVSGKDDILGTGNLEDDQPRPPKFEKVEPTMDSEELVLAAYRAFGHEVDFDPRARLYRTVGPSGRGTHLHFGDRGSRTLIGEQDHRPGRPGFVRTMERLIVEGGHLTADALRTPEAAVRAAVDAWLVAECGDGYAVEAVEVLDRRPQVHGRVTMRVEAFNGVDRLETLVEASVGDSPSFPAGEELDTLPFMDERMSADECGADAATLGRAAAADPGVEAFISHYGQRLAASLTGADGAHGRARLEADFEPKLRAEVVGFEGLRYGEVGVKIDVEVDGVSRRTLPFRVCLPGGSLKVKPKLGVCHLSGRSTPVAFLGRCEVDQQSVLQHLLKVSDLSKRAAKPEHVGSCCVTDRTLLFEEMTHLADGRWAETSLTATCAVSGDAALEEELEPCDFTGDHVLPAWLAVSEISQKRYREDEGATCSASAATGHRSELFDCAVTGLPIAEHLAESCEVSGKRAGPGSLLTCDSSGKRLLPELTVDCAITGAVVEKSLTEKCRISGKRSLRTEMESHRGGFVDPAFLETCEASGDRVKLGSLLVCAASGKRVRPKLLQACAITGDRVLSSELVKLGTGERVRPEAAAVCAVSGERVIPGTLIACARTGRLVTPGLLGTCCVSGDRVLLDELVTLGDGRLALPEHLEACEASGRRFPASELVACAVTGKRVAPDLLVESDAPGERALAEALETVTDGRRFPPALVSACAISGERVPEAELKACAITGKQVHPRLLRACDVSGERVLAELLEGTSGGRHACPDLLGSCAITGARVPLDELETCAVTEQAVAPEQLETCCVSGKRVVHACLETLSDDRVVLPEHAATCEESGDRVVASELEACAVTGRLVLPSLLKACDLSGKRVLPETLQATTLGRHALPDLLGRCEVTQEPIPLGELEACEVTGQAVAPGQLGTCCASGKRVLPSRLEVLNEGRTALPEHVAACGMSGRRVLATELEACAVTGQRVLPECLRRCDLSGERVLPEELVEISGGRRVRPSLLRACARSGERVPPAELEPCEESGDLVLPRFLQACESTGRRVRVDLLATCAASGKRALRSLLVPSGLQGRPALVGELETCGESGRQVLPDELVTCAVLGDRIARDVASASEASGKLARTRLLVPCAVTGQHALPNELEACVCTGRKAMPSEMATSEQSGRRMLPGAAARATRGRTFHPDEVATCSWSGEVLPHEELGEDRLTGVVMSLRQLDSSGCCRAFLTFMNEPERGKDAANAIPWVEKHHAGTVGVPVAASRLAGPSKAQALRLETRALLGLKRIGFIGLLIRPDDSKTFELAGRFATFRRRGGRWEPDV
>NC_017080.1|WP_041378175.1|3721404_3722112_-|hypothetical-protein
MPFALNFDEALSGDPARFGLTADQAAAYRAVYTPYAAAATDLEVQRSQGLRSKQQTAARDTARDALLKVGRELYATVAANSDVSDQLKVRLGIRLRNGATPVPVPSAAPSAIVGAVRGREVTLRLFDPHTASKRGKAPGAVAAWVQTFVGDQTPADPAGWSFEGATTKYQSEVSFPASAPGGTRVWLRAAWVNGKQQAGPWSDPVSTYLQAAAPAAPANQVRPETEQTPPVRLAA
>NC_017080.1|WP_014438500.1|3722826_3723525_+|hypothetical-protein
MAQVAGNGIYTLPEAAALIGMKVPTLRSWFRDDGRRRSLFRGDYLAARAGERLTALSFHDLVEAVVAVKLKGLGMTPQRIRRTHAALAEAYGTPHPFAYRGFFVSEKADRVFAEFREDDPGGPLRAGFLEVGAEQHAIREVLQPFLQRVDYDPRTELAALVRLTADGSVHLDPERGFGKPLVASCSQRTAVLHAAWLANGRDAPVVADWYGVTTPEVEAAVSFHEDFRGLAA

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_017080_6	6.2|1500224|17|NC_017080|CRISPRCasFinder	1500224-1500240	17	NC_017080.1	450688-450704	1	0.941
NC_017080_6	6.2|1500224|17|NC_017080|CRISPRCasFinder	1500224-1500240	17	NC_017080.1	1642662-1642678	1	0.941
NC_017080_6	6.2|1500224|17|NC_017080|CRISPRCasFinder	1500224-1500240	17	NC_017080.1	2138199-2138215	1	0.941
NC_017080_6	6.2|1500224|17|NC_017080|CRISPRCasFinder	1500224-1500240	17	NC_017080.1	2173056-2173072	1	0.941
NC_017080_6	6.2|1500224|17|NC_017080|CRISPRCasFinder	1500224-1500240	17	NC_017080.1	2263161-2263177	1	0.941
NC_017080_6	6.2|1500224|17|NC_017080|CRISPRCasFinder	1500224-1500240	17	NC_017080.1	2334590-2334606	1	0.941
NC_017080_6	6.2|1500224|17|NC_017080|CRISPRCasFinder	1500224-1500240	17	NC_017080.1	2840826-2840842	1	0.941
NC_017080_6	6.2|1500224|17|NC_017080|CRISPRCasFinder	1500224-1500240	17	NC_017080.1	3345252-3345268	1	0.941
NC_017080_6	6.2|1500224|17|NC_017080|CRISPRCasFinder	1500224-1500240	17	NC_017080.1	3661247-3661263	1	0.941

1. spacer 6.2|1500224|17|NC_017080|CRISPRCasFinder matches to position: 450688-450704, mismatch: 1, identity: 0.941

gccgacgcccgcgtccg	CRISPR spacer
gccgacgcccgcgtgcg	Protospacer
************** **

2. spacer 6.2|1500224|17|NC_017080|CRISPRCasFinder matches to position: 1642662-1642678, mismatch: 1, identity: 0.941

gccgacgcccgcgtccg	CRISPR spacer
gccgacgcccgcgcccg	Protospacer
*************.***

3. spacer 6.2|1500224|17|NC_017080|CRISPRCasFinder matches to position: 2138199-2138215, mismatch: 1, identity: 0.941

gccgacgcccgcgtccg	CRISPR spacer
gccgacgcccgcggccg	Protospacer
************* ***

4. spacer 6.2|1500224|17|NC_017080|CRISPRCasFinder matches to position: 2173056-2173072, mismatch: 1, identity: 0.941

gccgacgcccgcgtccg	CRISPR spacer
gcggacgcccgcgtccg	Protospacer
** **************

5. spacer 6.2|1500224|17|NC_017080|CRISPRCasFinder matches to position: 2263161-2263177, mismatch: 1, identity: 0.941

gccgacgcccgcgtccg	CRISPR spacer
gccgacgcccgcgaccg	Protospacer
************* ***

6. spacer 6.2|1500224|17|NC_017080|CRISPRCasFinder matches to position: 2334590-2334606, mismatch: 1, identity: 0.941

gccgacgcccgcgtccg	CRISPR spacer
gccgacgccggcgtccg	Protospacer
********* *******

7. spacer 6.2|1500224|17|NC_017080|CRISPRCasFinder matches to position: 2840826-2840842, mismatch: 1, identity: 0.941

gccgacgcccgcgtccg	CRISPR spacer
gccgacggccgcgtccg	Protospacer
******* *********

8. spacer 6.2|1500224|17|NC_017080|CRISPRCasFinder matches to position: 3345252-3345268, mismatch: 1, identity: 0.941

gccgacgcccgcgtccg	CRISPR spacer
gccgacgcccgcggccg	Protospacer
************* ***

9. spacer 6.2|1500224|17|NC_017080|CRISPRCasFinder matches to position: 3661247-3661263, mismatch: 1, identity: 0.941

gccgacgcccgcgtccg	CRISPR spacer
gccgatgcccgcgtccg	Protospacer
*****.***********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_017080_3	3.2|1201350|23|NC_017080|CRT	1201350-1201372	23	NZ_CP017565	Paraburkholderia sprentiae WSM5005 plasmid pl2WSM5005, complete sequence	211559-211581	3	0.87
NC_017080_2	2.47|771786|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR	771786-771818	33	NZ_AP022339	Mameliella alba strain KU6B plasmid pKUB112, complete sequence	52826-52858	4	0.879
NC_017080_2	2.10|769348|33|NC_017080|CRISPRCasFinder,CRT	769348-769380	33	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1822349-1822381	5	0.848
NC_017080_2	2.10|769348|33|NC_017080|CRISPRCasFinder,CRT	769348-769380	33	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1822530-1822562	5	0.848
NC_017080_2	2.10|769348|33|NC_017080|CRISPRCasFinder,CRT	769348-769380	33	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1822528-1822560	5	0.848
NC_017080_2	2.10|769348|33|NC_017080|CRISPRCasFinder,CRT	769348-769380	33	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1822495-1822527	5	0.848
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NC_011143	Phenylobacterium zucineum HLK1 plasmid, complete sequence	195862-195895	5	0.853
NC_017080_2	2.3|768888|33|NC_017080|CRISPRCasFinder,CRT	768888-768920	33	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	82839-82871	6	0.818
NC_017080_2	2.3|768888|33|NC_017080|CRISPRCasFinder,CRT	768888-768920	33	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	177831-177863	6	0.818
NC_017080_2	2.8|769217|33|NC_017080|CRISPRCasFinder,CRT	769217-769249	33	NZ_CP025505	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvC, complete sequence	49624-49656	6	0.818
NC_017080_2	2.10|769348|33|NC_017080|CRISPRCasFinder,CRT	769348-769380	33	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1905682-1905714	6	0.818
NC_017080_2	2.10|769348|33|NC_017080|CRISPRCasFinder,CRT	769348-769380	33	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1724733-1724765	6	0.818
NC_017080_2	2.10|769348|33|NC_017080|CRISPRCasFinder,CRT	769348-769380	33	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1794948-1794980	6	0.818
NC_017080_2	2.10|769348|33|NC_017080|CRISPRCasFinder,CRT	769348-769380	33	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1723755-1723787	6	0.818
NC_017080_2	2.10|769348|33|NC_017080|CRISPRCasFinder,CRT	769348-769380	33	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1815464-1815496	6	0.818
NC_017080_2	2.10|769348|33|NC_017080|CRISPRCasFinder,CRT	769348-769380	33	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1815466-1815498	6	0.818
NC_017080_2	2.10|769348|33|NC_017080|CRISPRCasFinder,CRT	769348-769380	33	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1724726-1724758	6	0.818
NC_017080_2	2.10|769348|33|NC_017080|CRISPRCasFinder,CRT	769348-769380	33	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1724047-1724079	6	0.818
NC_017080_2	2.10|769348|33|NC_017080|CRISPRCasFinder,CRT	769348-769380	33	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1724715-1724747	6	0.818
NC_017080_2	2.28|770533|34|NC_017080|CRISPRCasFinder,CRT	770533-770566	34	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	306341-306374	6	0.824
NC_017080_2	2.28|770533|34|NC_017080|CRISPRCasFinder,CRT	770533-770566	34	NZ_CP017103	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872a, complete sequence	138152-138185	6	0.824
NC_017080_2	2.28|770533|34|NC_017080|CRISPRCasFinder,CRT	770533-770566	34	CP006878	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602a, complete sequence	166485-166518	6	0.824
NC_017080_2	2.29|770599|33|NC_017080|CRISPRCasFinder,CRT	770599-770631	33	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	136745-136777	6	0.818
NC_017080_2	2.34|770930|33|NC_017080|CRISPRCasFinder,CRT	770930-770962	33	NZ_CP015743	Shinella sp. HZN7 plasmid pShin-07, complete sequence	16696-16728	6	0.818
NC_017080_2	2.34|770930|33|NC_017080|CRISPRCasFinder,CRT	770930-770962	33	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	756901-756933	6	0.818
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	288077-288110	6	0.824
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	1002750-1002783	6	0.824
NC_017080_2	2.47|771786|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR	771786-771818	33	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1214408-1214440	6	0.818
NC_017080_3	3.1|1201296|31|NC_017080|CRT	1201296-1201326	31	NZ_LR134470	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 28, complete sequence	4910-4940	6	0.806
NC_017080_7	7.1|1500525|29|NC_017080|CRISPRCasFinder	1500525-1500553	29	NZ_CP036456	Streptomonospora sp. M2 plasmid phiM2, complete sequence	41299-41327	6	0.793
NC_017080_12	12.2|2695718|28|NC_017080|CRISPRCasFinder	2695718-2695745	28	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	608027-608054	6	0.786
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NC_006569	Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence	175129-175161	7	0.788
NC_017080_2	2.8|769217|33|NC_017080|CRISPRCasFinder,CRT	769217-769249	33	NC_011667	Thauera sp. MZ1T plasmid pTha01, complete sequence	59860-59892	7	0.788
NC_017080_2	2.18|769876|34|NC_017080|CRISPRCasFinder,CRT	769876-769909	34	NZ_CP042332	Bosea sp. F3-2 plasmid pB32-1, complete sequence	423776-423809	7	0.794
NC_017080_2	2.31|770731|33|NC_017080|CRISPRCasFinder,CRT	770731-770763	33	NC_023597	Mycobacterium phage 20ES, complete genome	46115-46147	7	0.788
NC_017080_2	2.31|770731|33|NC_017080|CRISPRCasFinder,CRT	770731-770763	33	JX899358	Mycobacterium phage First, complete genome	46015-46047	7	0.788
NC_017080_2	2.34|770930|33|NC_017080|CRISPRCasFinder,CRT	770930-770962	33	NC_015178	Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence	185280-185312	7	0.788
NC_017080_2	2.34|770930|33|NC_017080|CRISPRCasFinder,CRT	770930-770962	33	NC_009467	Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence	197609-197641	7	0.788
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NZ_LR594664	Variovorax sp. RA8 plasmid 3	139963-139996	7	0.794
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NC_047756	Caulobacter phage Sansa, complete genome	56727-56760	7	0.794
NC_017080_2	2.41|771391|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR	771391-771423	33	CP003957	Rhodococcus opacus PD630 plasmid 8, complete sequence	4674-4706	7	0.788
NC_017080_2	2.55|772310|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR	772310-772342	33	NZ_CP017104	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872c, complete sequence	70586-70618	7	0.788
NC_017080_2	2.55|772310|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR	772310-772342	33	CP006879	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602b, complete sequence	73372-73404	7	0.788
NC_017080_3	3.1|1201296|31|NC_017080|CRT	1201296-1201326	31	NZ_CP020568	Kitasatospora aureofaciens strain DM-1 plasmid unnamed1, complete sequence	98999-99029	7	0.774
NC_017080_7	7.1|1500525|29|NC_017080|CRISPRCasFinder	1500525-1500553	29	NZ_CP021000	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6165 plasmid unnamed1, complete sequence	2712-2740	7	0.759
NC_017080_7	7.1|1500525|29|NC_017080|CRISPRCasFinder	1500525-1500553	29	NZ_CP039643	Azospirillum sp. TSA2s plasmid p3	14865-14893	7	0.759
NC_017080_7	7.1|1500525|29|NC_017080|CRISPRCasFinder	1500525-1500553	29	NZ_CP015738	Shinella sp. HZN7 plasmid pShin-02, complete sequence	30224-30252	7	0.759
NC_017080_7	7.1|1500525|29|NC_017080|CRISPRCasFinder	1500525-1500553	29	NZ_CP016462	Blastomonas sp. RAC04 plasmid pBSY18_1, complete sequence	179200-179228	7	0.759
NC_017080_7	7.1|1500525|29|NC_017080|CRISPRCasFinder	1500525-1500553	29	MN234196	Gordonia phage CloverMinnie, complete genome	58774-58802	7	0.759
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1452272-1452304	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	998089-998121	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	877489-877521	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1003258-1003290	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1472995-1473027	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1871713-1871745	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1366354-1366386	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1846448-1846480	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1366321-1366353	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1365126-1365158	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1365163-1365195	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1365163-1365195	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	790051-790083	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1365152-1365184	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	920972-921004	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1365152-1365184	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1366319-1366351	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1365163-1365195	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	780813-780845	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1365174-1365206	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1365152-1365184	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	780813-780845	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1794357-1794389	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	640750-640782	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1246185-1246217	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1433606-1433638	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1569518-1569550	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1178640-1178672	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1689191-1689223	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	1254828-1254860	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	968796-968828	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1183728-1183760	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	1216549-1216581	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1180471-1180503	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1149383-1149415	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	1254817-1254849	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1236581-1236613	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1264187-1264219	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1159199-1159231	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1236581-1236613	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1264187-1264219	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1236581-1236613	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1159222-1159254	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1236585-1236617	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1264187-1264219	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1264187-1264219	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1264187-1264219	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1159222-1159254	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	1176732-1176764	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	1157397-1157429	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	1205073-1205105	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	1251510-1251542	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1159222-1159254	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1236580-1236612	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1159222-1159254	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1159222-1159254	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1264188-1264220	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1177771-1177803	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	987154-987186	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1362906-1362938	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	999918-999950	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	808959-808991	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1106777-1106809	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1233838-1233870	8	0.758
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	1079338-1079370	8	0.758
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NZ_CP050100	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b3, complete sequence	166577-166609	8	0.758
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NZ_CP053443	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eC, complete sequence	129327-129359	8	0.758
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	1678225-1678257	8	0.758
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	1436200-1436232	8	0.758
NC_017080_2	2.8|769217|33|NC_017080|CRISPRCasFinder,CRT	769217-769249	33	NZ_CP013109	Sinorhizobium americanum strain CFNEI 73 plasmid B, complete sequence	533452-533484	8	0.758
NC_017080_2	2.8|769217|33|NC_017080|CRISPRCasFinder,CRT	769217-769249	33	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	1328349-1328381	8	0.758
NC_017080_2	2.8|769217|33|NC_017080|CRISPRCasFinder,CRT	769217-769249	33	NZ_CP013053	Sinorhizobium americanum CCGM7 plasmid B, complete sequence	494031-494063	8	0.758
NC_017080_2	2.12|769479|34|NC_017080|CRISPRCasFinder,CRT	769479-769512	34	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	15773-15806	8	0.765
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP030762	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed2, complete sequence	87063-87096	8	0.765
NC_017080_2	2.18|769876|34|NC_017080|CRISPRCasFinder,CRT	769876-769909	34	NZ_LR134451	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence	210097-210130	8	0.765
NC_017080_2	2.31|770731|33|NC_017080|CRISPRCasFinder,CRT	770731-770763	33	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	1851-1883	8	0.758
NC_017080_2	2.31|770731|33|NC_017080|CRISPRCasFinder,CRT	770731-770763	33	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	636631-636663	8	0.758
NC_017080_2	2.31|770731|33|NC_017080|CRISPRCasFinder,CRT	770731-770763	33	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	91560-91592	8	0.758
NC_017080_2	2.31|770731|33|NC_017080|CRISPRCasFinder,CRT	770731-770763	33	NZ_KR997898	Mycobacterium avium subsp. hominissuis strain 88Br plasmid pMA100, complete sequence	40774-40806	8	0.758
NC_017080_2	2.31|770731|33|NC_017080|CRISPRCasFinder,CRT	770731-770763	33	NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	337488-337520	8	0.758
NC_017080_2	2.33|770863|35|NC_017080|CRISPRCasFinder,CRT	770863-770897	35	NZ_CP027299	Streptomyces sp. SGAir0924 plasmid unnamed_5	69583-69617	8	0.771
NC_017080_2	2.34|770930|33|NC_017080|CRISPRCasFinder,CRT	770930-770962	33	NZ_LR134449	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 7, complete sequence	34895-34927	8	0.758
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NZ_AP022333	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence	222908-222941	8	0.765
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NZ_AP022333	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence	234667-234700	8	0.765
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NC_017805	Deinococcus gobiensis I-0 plasmid P1, complete sequence	137120-137153	8	0.765
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	MK433264	Gordonia phage Tiamoceli, complete genome	30168-30201	8	0.765
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	MT952843	Gordonia phage Twonlo, complete genome	28786-28819	8	0.765
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	MK977704	Gordonia Terrae phage RoadKill, complete genome	28835-28868	8	0.765
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	KR053200	Gordonia phage GTE6, complete genome	29832-29865	8	0.765
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	256875-256908	8	0.765
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NZ_CP024940	Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence	397085-397118	8	0.765
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	GQ141189	Bifidobacterium phage Bbif-1, complete sequence	3531-3564	8	0.765
NC_017080_2	2.37|771128|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR	771128-771160	33	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	788186-788218	8	0.758
NC_017080_2	2.45|771655|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR	771655-771688	34	NZ_CP022581	Gordonia rubripertincta strain CWB2 plasmid pGCWB2, complete sequence	23466-23499	8	0.765
NC_017080_2	2.51|772049|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR	772049-772081	33	NZ_CP006369	Aureimonas sp. AU20 plasmid pAU20b, complete sequence	54614-54646	8	0.758
NC_017080_2	2.56|772375|35|NC_017080|CRISPRCasFinder,CRT,PILER-CR	772375-772409	35	NC_011887	Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence	293747-293781	8	0.771
NC_017080_3	3.1|1201296|31|NC_017080|CRT	1201296-1201326	31	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	426976-427006	8	0.742
NC_017080_3	3.1|1201296|31|NC_017080|CRT	1201296-1201326	31	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	620433-620463	8	0.742
NC_017080_7	7.1|1500525|29|NC_017080|CRISPRCasFinder	1500525-1500553	29	NZ_CP015090	Pelagibaca abyssi strain JLT2014 plasmid pPABY2, complete sequence	168332-168360	8	0.724
NC_017080_7	7.1|1500525|29|NC_017080|CRISPRCasFinder	1500525-1500553	29	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	727023-727051	8	0.724
NC_017080_2	2.3|768888|33|NC_017080|CRISPRCasFinder,CRT	768888-768920	33	NZ_LR134456	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence	283652-283684	9	0.727
NC_017080_2	2.3|768888|33|NC_017080|CRISPRCasFinder,CRT	768888-768920	33	NZ_CP015867	Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence	318876-318908	9	0.727
NC_017080_2	2.4|768953|33|NC_017080|CRISPRCasFinder,CRT	768953-768985	33	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	590238-590270	9	0.727
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NZ_CP050095	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b1, complete sequence	159770-159802	9	0.727
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NZ_CP050083	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence	497563-497595	9	0.727
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NC_008381	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence	370037-370069	9	0.727
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NZ_CP025017	Rhizobium leguminosarum strain Norway plasmid pRLN5, complete sequence	147304-147336	9	0.727
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NZ_CP049733	Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence	485241-485273	9	0.727
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NZ_CP048284	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence	167912-167944	9	0.727
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NZ_CP054026	Rhizobium sp. JKLM12A2 plasmid pPR12A205, complete sequence	188817-188849	9	0.727
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NZ_CP054036	Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence	30221-30253	9	0.727
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NZ_CP053207	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence	514285-514317	9	0.727
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NC_012854	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505, complete sequence	165213-165245	9	0.727
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NZ_CP018232	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed4, complete sequence	144655-144687	9	0.727
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NZ_CP016291	Rhizobium leguminosarum strain Vaf10 plasmid unnamed6, complete sequence	239545-239577	9	0.727
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	493153-493185	9	0.727
NC_017080_2	2.5|769018|33|NC_017080|CRISPRCasFinder,CRT	769018-769050	33	NZ_CP022568	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence	177832-177864	9	0.727
NC_017080_2	2.7|769149|36|NC_017080|CRISPRCasFinder,CRT	769149-769184	36	NZ_CP018865	Arthrobacter crystallopoietes strain DSM 20117 plasmid pLDW-10, complete sequence	27276-27311	9	0.75
NC_017080_2	2.12|769479|34|NC_017080|CRISPRCasFinder,CRT	769479-769512	34	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	401185-401218	9	0.735
NC_017080_2	2.12|769479|34|NC_017080|CRISPRCasFinder,CRT	769479-769512	34	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	261841-261874	9	0.735
NC_017080_2	2.12|769479|34|NC_017080|CRISPRCasFinder,CRT	769479-769512	34	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	438953-438986	9	0.735
NC_017080_2	2.12|769479|34|NC_017080|CRISPRCasFinder,CRT	769479-769512	34	NZ_CP034911	Ensifer alkalisoli strain YIC4027 plasmid unnamed, complete sequence	15486-15519	9	0.735
NC_017080_2	2.12|769479|34|NC_017080|CRISPRCasFinder,CRT	769479-769512	34	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	962226-962259	9	0.735
NC_017080_2	2.12|769479|34|NC_017080|CRISPRCasFinder,CRT	769479-769512	34	NZ_CP015743	Shinella sp. HZN7 plasmid pShin-07, complete sequence	120099-120132	9	0.735
NC_017080_2	2.12|769479|34|NC_017080|CRISPRCasFinder,CRT	769479-769512	34	NC_015597	Sinorhizobium meliloti AK83 plasmid pSINME01, complete sequence	134372-134405	9	0.735
NC_017080_2	2.12|769479|34|NC_017080|CRISPRCasFinder,CRT	769479-769512	34	NZ_CP024309	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3b, complete sequence	231678-231711	9	0.735
NC_017080_2	2.12|769479|34|NC_017080|CRISPRCasFinder,CRT	769479-769512	34	NZ_CP021807	Sinorhizobium meliloti strain T073 plasmid accessoryA, complete sequence	99596-99629	9	0.735
NC_017080_2	2.13|769545|34|NC_017080|CRISPRCasFinder,CRT	769545-769578	34	NC_021347	Rhodococcus phage E3, complete genome	141484-141517	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP031079	Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence	85968-86001	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	971710-971743	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	979662-979695	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	970807-970840	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	868120-868153	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1625033-1625066	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	894814-894847	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1053864-1053897	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	1071803-1071836	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1400194-1400227	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	972832-972865	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	1061615-1061648	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	940396-940429	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	776469-776502	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	985243-985276	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	887288-887321	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	867235-867268	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	872882-872915	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	872871-872904	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	981946-981979	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	868112-868145	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	868130-868163	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	868104-868137	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	1061604-1061637	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1067311-1067344	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1094935-1094968	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	1071829-1071862	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	945385-945418	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1067311-1067344	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1094935-1094968	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1067311-1067344	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	971794-971827	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	945408-945441	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1067315-1067348	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1094935-1094968	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1094935-1094968	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1094935-1094968	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	945408-945441	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	984405-984438	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	971790-971823	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	965086-965119	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	1013033-1013066	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	1059183-1059216	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	945408-945441	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1067310-1067343	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	945408-945441	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	945408-945441	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1094936-1094969	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	971775-971808	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1658079-1658112	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1441188-1441221	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1046812-1046845	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	824048-824081	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1642297-1642330	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	54479-54512	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1187144-1187177	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	105421-105454	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1007412-1007445	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1187111-1187144	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1185916-1185949	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1185953-1185986	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1185953-1185986	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	982365-982398	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1185942-1185975	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1090223-1090256	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1185942-1185975	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1187109-1187142	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1185953-1185986	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	968560-968593	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1185964-1185997	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1185942-1185975	9	0.735
NC_017080_2	2.17|769810|34|NC_017080|CRISPRCasFinder,CRT	769810-769843	34	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	968560-968593	9	0.735
NC_017080_2	2.18|769876|34|NC_017080|CRISPRCasFinder,CRT	769876-769909	34	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1516933-1516966	9	0.735
NC_017080_2	2.18|769876|34|NC_017080|CRISPRCasFinder,CRT	769876-769909	34	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	1393246-1393279	9	0.735
NC_017080_2	2.18|769876|34|NC_017080|CRISPRCasFinder,CRT	769876-769909	34	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	1069477-1069510	9	0.735
NC_017080_2	2.23|770202|34|NC_017080|CRISPRCasFinder,CRT	770202-770235	34	CP054917	Streptomyces sp. NA02950 plasmid unnamed, complete sequence	59957-59990	9	0.735
NC_017080_2	2.24|770268|34|NC_017080|CRISPRCasFinder,CRT	770268-770301	34	JN698994	Mycobacterium phage DS6A, complete genome	5898-5931	9	0.735
NC_017080_2	2.26|770399|34|NC_017080|CRISPRCasFinder,CRT	770399-770432	34	NZ_CP041930	Klebsiella pneumoniae strain 18-2374 plasmid pSECR18-2374C, complete sequence	85174-85207	9	0.735
NC_017080_2	2.26|770399|34|NC_017080|CRISPRCasFinder,CRT	770399-770432	34	NZ_CP043383	Enterobacter hormaechei subsp. xiangfangensis strain WCHEX045001 plasmid pNDM1_045001, complete sequence	66027-66060	9	0.735
NC_017080_2	2.26|770399|34|NC_017080|CRISPRCasFinder,CRT	770399-770432	34	NZ_CP049048	Enterobacter hormaechei strain Y233 plasmid p233-142, complete sequence	19187-19220	9	0.735
NC_017080_2	2.26|770399|34|NC_017080|CRISPRCasFinder,CRT	770399-770432	34	CP040467	Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence	35760-35793	9	0.735
NC_017080_2	2.26|770399|34|NC_017080|CRISPRCasFinder,CRT	770399-770432	34	NZ_CP014797	Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence	80205-80238	9	0.735
NC_017080_2	2.26|770399|34|NC_017080|CRISPRCasFinder,CRT	770399-770432	34	NZ_CP029359	Azospirillum sp. CFH 70021 plasmid unnamed4	27398-27431	9	0.735
NC_017080_2	2.26|770399|34|NC_017080|CRISPRCasFinder,CRT	770399-770432	34	NZ_CP029360	Azospirillum sp. CFH 70021 plasmid unnamed5	45499-45532	9	0.735
NC_017080_2	2.26|770399|34|NC_017080|CRISPRCasFinder,CRT	770399-770432	34	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	785825-785858	9	0.735
NC_017080_2	2.31|770731|33|NC_017080|CRISPRCasFinder,CRT	770731-770763	33	NZ_CP032928	Agrobacterium tumefaciens strain 1D1460 plasmid pAt1D1460, complete sequence	462697-462729	9	0.727
NC_017080_2	2.31|770731|33|NC_017080|CRISPRCasFinder,CRT	770731-770763	33	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	413592-413624	9	0.727
NC_017080_2	2.34|770930|33|NC_017080|CRISPRCasFinder,CRT	770930-770962	33	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	66104-66136	9	0.727
NC_017080_2	2.34|770930|33|NC_017080|CRISPRCasFinder,CRT	770930-770962	33	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	66104-66136	9	0.727
NC_017080_2	2.34|770930|33|NC_017080|CRISPRCasFinder,CRT	770930-770962	33	NZ_CP021083	Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence	86068-86100	9	0.727
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	374919-374952	9	0.735
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	336033-336066	9	0.735
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	464504-464537	9	0.735
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NZ_CP045122	Rubrobacter sp. SCSIO 52915 plasmid unnamed1, complete sequence	66703-66736	9	0.735
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NZ_CP040720	Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence	190645-190678	9	0.735
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NC_011887	Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence	260768-260801	9	0.735
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	579998-580031	9	0.735
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	684211-684244	9	0.735
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	992572-992605	9	0.735
NC_017080_2	2.38|771193|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR	771193-771226	34	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1157635-1157668	9	0.735
NC_017080_2	2.49|771918|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR	771918-771951	34	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	430800-430833	9	0.735
NC_017080_2	2.51|772049|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR	772049-772081	33	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	68103-68135	9	0.727
NC_017080_2	2.51|772049|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR	772049-772081	33	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4090581-4090613	9	0.727
NC_017080_2	2.55|772310|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR	772310-772342	33	NZ_CP021649	Acidovorax sp. T1 plasmid p1-T1, complete sequence	1479-1511	9	0.727
NC_017080_2	2.58|772507|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR	772507-772540	34	NZ_CP018236	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed8	135381-135414	9	0.735
NC_017080_11	11.1|2506144|31|NC_017080|CRISPRCasFinder	2506144-2506174	31	CP051275	Salmonella phage SW-37, complete genome	37302-37332	9	0.71
NC_017080_2	2.3|768888|33|NC_017080|CRISPRCasFinder,CRT	768888-768920	33	NC_012521	Rhodococcus opacus B4 plasmid pROB02, complete sequence	41355-41387	10	0.697
NC_017080_2	2.18|769876|34|NC_017080|CRISPRCasFinder,CRT	769876-769909	34	NZ_CP031082	Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence	42847-42880	10	0.706
NC_017080_2	2.18|769876|34|NC_017080|CRISPRCasFinder,CRT	769876-769909	34	NZ_CP020441	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence	24820-24853	10	0.706
NC_017080_2	2.18|769876|34|NC_017080|CRISPRCasFinder,CRT	769876-769909	34	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	574524-574557	10	0.706
NC_017080_2	2.18|769876|34|NC_017080|CRISPRCasFinder,CRT	769876-769909	34	NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	9100-9133	10	0.706
NC_017080_2	2.25|770334|33|NC_017080|CRISPRCasFinder,CRT	770334-770366	33	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	599922-599954	10	0.697
NC_017080_2	2.26|770399|34|NC_017080|CRISPRCasFinder,CRT	770399-770432	34	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	556064-556097	10	0.706
NC_017080_2	2.26|770399|34|NC_017080|CRISPRCasFinder,CRT	770399-770432	34	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	523062-523095	10	0.706
NC_017080_2	2.30|770664|35|NC_017080|CRISPRCasFinder,CRT	770664-770698	35	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3874388-3874422	10	0.714
NC_017080_2	2.31|770731|33|NC_017080|CRISPRCasFinder,CRT	770731-770763	33	NZ_LR134468	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 26, complete sequence	49561-49593	10	0.697
NC_017080_2	2.31|770731|33|NC_017080|CRISPRCasFinder,CRT	770731-770763	33	NZ_LR134461	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 19, complete sequence	15386-15418	10	0.697
NC_017080_2	2.31|770731|33|NC_017080|CRISPRCasFinder,CRT	770731-770763	33	MN103533	Mycobacterium phage Weirdo19, complete genome	12364-12396	10	0.697
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	477195-477228	10	0.706
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NZ_CP030772	Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence	942904-942937	10	0.706
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NC_007950	Polaromonas sp. JS666 plasmid 2, complete sequence	137214-137247	10	0.706
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NC_015383	Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence	222418-222451	10	0.706
NC_017080_2	2.47|771786|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR	771786-771818	33	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	539864-539896	10	0.697
NC_017080_2	2.47|771786|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR	771786-771818	33	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	79912-79944	10	0.697
NC_017080_2	2.47|771786|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR	771786-771818	33	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	1358331-1358363	10	0.697
NC_017080_2	2.47|771786|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR	771786-771818	33	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	489129-489161	10	0.697
NC_017080_2	2.47|771786|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR	771786-771818	33	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	774039-774071	10	0.697
NC_017080_2	2.49|771918|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR	771918-771951	34	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1001649-1001682	10	0.706
NC_017080_2	2.51|772049|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR	772049-772081	33	NZ_LR134454	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence	171445-171477	10	0.697
NC_017080_2	2.53|772178|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR	772178-772211	34	NZ_LR134459	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence	154983-155016	10	0.706
NC_017080_2	2.56|772375|35|NC_017080|CRISPRCasFinder,CRT,PILER-CR	772375-772409	35	NZ_CP046053	Methylocystis heyeri strain H2 plasmid unnamed1, complete sequence	56885-56919	10	0.714
NC_017080_2	2.61|772707|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR	772707-772740	34	NZ_LR134459	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence	154983-155016	10	0.706
NC_017080_11	11.1|2506144|31|NC_017080|CRISPRCasFinder	2506144-2506174	31	AM157767	Uncultured bacterium IncP-1gamma plasmid QKH54 complete genome	31778-31808	10	0.677
NC_017080_2	2.3|768888|33|NC_017080|CRISPRCasFinder,CRT	768888-768920	33	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	1021063-1021095	11	0.667
NC_017080_2	2.6|769083|34|NC_017080|CRISPRCasFinder,CRT	769083-769116	34	AP021850	Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome	216359-216392	11	0.676
NC_017080_2	2.36|771062|34|NC_017080|CRISPRCasFinder,CRT	771062-771095	34	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	323661-323694	11	0.676
NC_017080_2	2.38|771193|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR	771193-771226	34	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	181468-181501	12	0.647

1. spacer 3.2|1201350|23|NC_017080|CRT matches to NZ_CP017565 (Paraburkholderia sprentiae WSM5005 plasmid pl2WSM5005, complete sequence) position: , mismatch: 3, identity: 0.87

gggcctcgagaacgtggcctgtg	CRISPR spacer
tggcctcgagaacgtggccttgg	Protospacer
 *******************  *

2. spacer 2.47|771786|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022339 (Mameliella alba strain KU6B plasmid pKUB112, complete sequence) position: , mismatch: 4, identity: 0.879

ggcccggatgggcgacttcctgccccgcctgcg-	CRISPR spacer
ggcccggatggccgactgcctgccccgcc-gcat	Protospacer
*********** ***** *********** **. 

3. spacer 2.10|769348|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.848

cggaatcccgcttctctttgtcgcg-ttgcttat	CRISPR spacer
cggtatcccgcttctctttgtcccgattgcgtc-	Protospacer
*** ****************** ** **** *  

4. spacer 2.10|769348|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.848

cggaatcccgcttctctttgtcgcg-ttgcttat	CRISPR spacer
cggtatcccgcttctctttgtcccgattgcgtc-	Protospacer
*** ****************** ** **** *  

5. spacer 2.10|769348|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.848

cggaatcccgcttctctttgtcgcg-ttgcttat	CRISPR spacer
cggtatcccgcttctctttgtcccgattgcgtc-	Protospacer
*** ****************** ** **** *  

6. spacer 2.10|769348|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.848

cggaatcccgcttctctttgtcgcg-ttgcttat	CRISPR spacer
cggtatcccgcttctctttgtcccgattgcgtc-	Protospacer
*** ****************** ** **** *  

7. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NC_011143 (Phenylobacterium zucineum HLK1 plasmid, complete sequence) position: , mismatch: 5, identity: 0.853

ggatgccgggcaggtcgccgccgccgggctcggt-	CRISPR spacer
gcatgaccggcaggtcgccgccgcc-ggcacggtc	Protospacer
* *** * ***************** *** **** 

8. spacer 2.3|768888|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 6, identity: 0.818

tccgtccggccgcacctcctccggcatcgaagc	CRISPR spacer
tccgtccggccgcgcctcccccggcacccgggc	Protospacer
*************.*****.******.* ..**

9. spacer 2.3|768888|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 6, identity: 0.818

tccgtccggccgcacctcctccggcatcgaagc-	CRISPR spacer
cccgtcccgccgcacctcctccagca-cgcggcg	Protospacer
.****** **************.*** ** .** 

10. spacer 2.8|769217|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP025505 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvC, complete sequence) position: , mismatch: 6, identity: 0.818

cggggatcatgtcgatcagcggcgcgataaccg	CRISPR spacer
tgccgatcacgtcgatcagcggcgcgatatcca	Protospacer
.*  *****.******************* **.

11. spacer 2.10|769348|33|NC_017080|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 6, identity: 0.818

cggaatcccgcttctctttgtcgcg-ttgcttat	CRISPR spacer
gggtatcccgcttctctttgtcccgattgcgtc-	Protospacer
 ** ****************** ** **** *  

12. spacer 2.10|769348|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.818

cggaatcccgcttctctttgtcgcg-ttgcttat	CRISPR spacer
gggtatcccgcttctctttgtcccgattgcgtc-	Protospacer
 ** ****************** ** **** *  

13. spacer 2.10|769348|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.818

cggaatcccgcttctctttgtcgcg-ttgcttat	CRISPR spacer
gggtatcccgcttctctttgtcccgattgcgtc-	Protospacer
 ** ****************** ** **** *  

14. spacer 2.10|769348|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 6, identity: 0.818

cggaatcccgcttctctttgtcgcg-ttgcttat	CRISPR spacer
gggtatcccgcttctctttgtcccgattgcgtc-	Protospacer
 ** ****************** ** **** *  

15. spacer 2.10|769348|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.818

cggaatcccgcttctctttgtcgcg-ttgcttat	CRISPR spacer
gggtatcccgcttctctttgtcccgattgcgtc-	Protospacer
 ** ****************** ** **** *  

16. spacer 2.10|769348|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.818

cggaatcccgcttctctttgtcgcg-ttgcttat	CRISPR spacer
gggtatcccgcttctctttgtcccgattgcgtc-	Protospacer
 ** ****************** ** **** *  

17. spacer 2.10|769348|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.818

cggaatcccgcttctctttgtcgcg-ttgcttat	CRISPR spacer
gggtatcccgcttctctttgtcccgattgcgtc-	Protospacer
 ** ****************** ** **** *  

18. spacer 2.10|769348|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.818

cggaatcccgcttctctttgtcgcg-ttgcttat	CRISPR spacer
gggtatcccgcttctctttgtcccgattgcgtc-	Protospacer
 ** ****************** ** **** *  

19. spacer 2.10|769348|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.818

cggaatcccgcttctctttgtcgcg-ttgcttat	CRISPR spacer
gggtatcccgcttctctttgtcccgattgcgtc-	Protospacer
 ** ****************** ** **** *  

20. spacer 2.28|770533|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 6, identity: 0.824

gccccagcggccgccaccaagtgt-cgccccaggc	CRISPR spacer
gcctcagcggccgccgccaagtgtacgccgcata-	Protospacer
***.***********.******** **** ** . 

21. spacer 2.28|770533|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP017103 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872a, complete sequence) position: , mismatch: 6, identity: 0.824

gccccagcggccgccaccaagtgt-cgccccaggc	CRISPR spacer
gcctcagccgccgccaccaagtgtacgccgcaca-	Protospacer
***.**** *************** **** ** . 

22. spacer 2.28|770533|34|NC_017080|CRISPRCasFinder,CRT matches to CP006878 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602a, complete sequence) position: , mismatch: 6, identity: 0.824

gccccagcggccgccaccaagtgt-cgccccaggc	CRISPR spacer
gcctcagccgccgccaccaagtgtacgccgcaca-	Protospacer
***.**** *************** **** ** . 

23. spacer 2.29|770599|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 6, identity: 0.818

-ctgctcacccccgcggcggaacgctccgcggat	CRISPR spacer
tccgcgc-cccgcgcggcggaacgctcggcggaa	Protospacer
 *.** * *** *************** ***** 

24. spacer 2.34|770930|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP015743 (Shinella sp. HZN7 plasmid pShin-07, complete sequence) position: , mismatch: 6, identity: 0.818

ccgaggcgccggtcgagttcggcg--gtccagacg	CRISPR spacer
ccgaggcgccggtcgagatcggcgccatcctgc--	Protospacer
***************** ******  .*** *   

25. spacer 2.34|770930|33|NC_017080|CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 6, identity: 0.818

ccgaggcgccggtcgagttcggcggtccagacg-	CRISPR spacer
ccgaggcggcggccgagttcggcga-ccggccga	Protospacer
******** ***.***********. **.* ** 

26. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

ggatgccgggcaggtcgccgccgccg-ggctcggt	CRISPR spacer
ggatgccgggcaggacgccaccgccgaaggttgg-	Protospacer
************** ****.****** .* *.** 

27. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 6, identity: 0.824

ggatgccgggcaggtcgccgccgccg-ggctcggt	CRISPR spacer
ggatgccgggcgggtcggcgccgcgatggcgcgg-	Protospacer
***********.***** ****** . *** *** 

28. spacer 2.47|771786|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 6, identity: 0.818

---ggcccggatgggcgacttcctgccccgcctgcg	CRISPR spacer
gcaggc---gctgggcgacctcctgcgccgcctgcg	Protospacer
   ***   * ********.****** *********

29. spacer 3.1|1201296|31|NC_017080|CRT matches to NZ_LR134470 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 28, complete sequence) position: , mismatch: 6, identity: 0.806

-cgcgtaccggcgtaccggggcctgcggcgta	CRISPR spacer
gctcg-accggcgtaccgggggctccggccca	Protospacer
 * ** *************** ** **** .*

30. spacer 7.1|1500525|29|NC_017080|CRISPRCasFinder matches to NZ_CP036456 (Streptomonospora sp. M2 plasmid phiM2, complete sequence) position: , mismatch: 6, identity: 0.793

ggctccaccgcgctgcgggtgtcgcgtgc	CRISPR spacer
gcctccaccgcggtgcgggtgccgcgctt	Protospacer
* ********** ********.****. .

31. spacer 12.2|2695718|28|NC_017080|CRISPRCasFinder matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 6, identity: 0.786

tggggaccgccccgccgcctctccagga	CRISPR spacer
cggggtccgccccgccgcctcccccaca	Protospacer
.**** ***************.** . *

32. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NC_006569 (Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.788

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcaagcgacccggtgtcaatca	Protospacer
*********************** **.* .. .

33. spacer 2.8|769217|33|NC_017080|CRISPRCasFinder,CRT matches to NC_011667 (Thauera sp. MZ1T plasmid pTha01, complete sequence) position: , mismatch: 7, identity: 0.788

cggggatcatgtcgatcagcggcgcgataaccg	CRISPR spacer
cgcgcgccttgtcgatcagcggcgcgatcgccg	Protospacer
** * ..* ******************* .***

34. spacer 2.18|769876|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP042332 (Bosea sp. F3-2 plasmid pB32-1, complete sequence) position: , mismatch: 7, identity: 0.794

cgcggtcca-cgccgctcgccgcgagcgccttcgt	CRISPR spacer
-ccggtgcgccgccgcccgctgcgagcgccttcgc	Protospacer
  **** *. ******.***.*************.

35. spacer 2.31|770731|33|NC_017080|CRISPRCasFinder,CRT matches to NC_023597 (Mycobacterium phage 20ES, complete genome) position: , mismatch: 7, identity: 0.788

cagggcgtgggcgccggccatgtcgtcggcgat	CRISPR spacer
ctgcttgagggcgtcggccatgtcgtcagcgat	Protospacer
* *  .* *****.*************.*****

36. spacer 2.31|770731|33|NC_017080|CRISPRCasFinder,CRT matches to JX899358 (Mycobacterium phage First, complete genome) position: , mismatch: 7, identity: 0.788

cagggcgtgggcgccggccatgtcgtcggcgat	CRISPR spacer
ctgcttgagggcgtcggccatgtcgtcagcgat	Protospacer
* *  .* *****.*************.*****

37. spacer 2.34|770930|33|NC_017080|CRISPRCasFinder,CRT matches to NC_015178 (Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence) position: , mismatch: 7, identity: 0.788

ccgaggcgccggtcgagttcggcg---gtccagacg	CRISPR spacer
ccgagccgccgggcgagttcggcgaacatccac---	Protospacer
***** ****** ***********   .****    

38. spacer 2.34|770930|33|NC_017080|CRISPRCasFinder,CRT matches to NC_009467 (Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence) position: , mismatch: 7, identity: 0.788

ccgaggcgccggtcgagttcggcg---gtccagacg	CRISPR spacer
ccgagccgccgggcgagttcggcgaacatccac---	Protospacer
***** ****** ***********   .****    

39. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_LR594664 (Variovorax sp. RA8 plasmid 3) position: , mismatch: 7, identity: 0.794

ggatgccgggcaggtcgccgccgccg-ggctcggt	CRISPR spacer
cgatgccgcgcacgtcgccgccgccgccgcccga-	Protospacer
 ******* *** *************  **.**. 

40. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NC_047756 (Caulobacter phage Sansa, complete genome) position: , mismatch: 7, identity: 0.794

ggatgccgggcaggtcgccgccgc---cgggctcggt	CRISPR spacer
ggatgccgggctcgtcgccgccgcgatcgcgcgc---	Protospacer
***********  ***********   ** ** *   

41. spacer 2.41|771391|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to CP003957 (Rhodococcus opacus PD630 plasmid 8, complete sequence) position: , mismatch: 7, identity: 0.788

gcgtctgcgggaggtgcggcccggcgggccgct	CRISPR spacer
ccgagttcggcgggtgcggcccggcgggccgca	Protospacer
 **  * *** .******************** 

42. spacer 2.55|772310|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017104 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872c, complete sequence) position: , mismatch: 7, identity: 0.788

gaggggccatcgtcttccgcgccgccatcgtca	CRISPR spacer
ggggcgccatcgtcctccgcgccgccgaggaca	Protospacer
*.** *********.***********.  * **

43. spacer 2.55|772310|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to CP006879 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602b, complete sequence) position: , mismatch: 7, identity: 0.788

gaggggccatcgtcttccgcgccgccatcgtca	CRISPR spacer
ggggcgccatcgtcctccgcgccgccgaggaca	Protospacer
*.** *********.***********.  * **

44. spacer 3.1|1201296|31|NC_017080|CRT matches to NZ_CP020568 (Kitasatospora aureofaciens strain DM-1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

cgcgtaccggcgtaccggggcctgcggcgta	CRISPR spacer
tgggcaccggcgtgccgggggctgcggcgcg	Protospacer
.* *.********.****** ********..

45. spacer 7.1|1500525|29|NC_017080|CRISPRCasFinder matches to NZ_CP021000 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6165 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ggctccaccgcgctgcgggtgtcgcgtgc	CRISPR spacer
tgcgccaccgcgctgcgggtgacgcccag	Protospacer
 ** ***************** *** .. 

46. spacer 7.1|1500525|29|NC_017080|CRISPRCasFinder matches to NZ_CP039643 (Azospirillum sp. TSA2s plasmid p3) position: , mismatch: 7, identity: 0.759

ggctccaccgcgctgcgggtgtcgcgtgc	CRISPR spacer
aggaccaccgtgctgcgggtgtcgcggat	Protospacer
.*  ******.*************** ..

47. spacer 7.1|1500525|29|NC_017080|CRISPRCasFinder matches to NZ_CP015738 (Shinella sp. HZN7 plasmid pShin-02, complete sequence) position: , mismatch: 7, identity: 0.759

ggctccaccgcgctgcgggtgtcgcgtgc	CRISPR spacer
atctccaccgcgctgcgcgtggcgcaagg	Protospacer
. *************** *** ***. * 

48. spacer 7.1|1500525|29|NC_017080|CRISPRCasFinder matches to NZ_CP016462 (Blastomonas sp. RAC04 plasmid pBSY18_1, complete sequence) position: , mismatch: 7, identity: 0.759

ggctccaccgcgctgcgggtgtcgcgtgc	CRISPR spacer
cacgccaccgcgctgcgtgtgtcgtgtcg	Protospacer
 .* ************* ******.**  

49. spacer 7.1|1500525|29|NC_017080|CRISPRCasFinder matches to MN234196 (Gordonia phage CloverMinnie, complete genome) position: , mismatch: 7, identity: 0.759

ggctccaccgcgctgcgggtgtcgcgtgc	CRISPR spacer
ggctccaccccgctgcgggtgctggtcac	Protospacer
********* ***********..*  ..*

50. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

51. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

52. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

53. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

54. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

55. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

56. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

57. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

58. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

59. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

60. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

61. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

62. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

63. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

64. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

65. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

66. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

67. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

68. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

69. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

70. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

71. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

72. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

73. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

74. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

75. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

76. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

77. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

78. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

79. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

80. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

81. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

82. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

83. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

84. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

85. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

86. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

87. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

88. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

89. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

90. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

91. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

92. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

93. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

94. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

95. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

96. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

97. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

98. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

99. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

100. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

101. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

102. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

103. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

104. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

105. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

106. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

107. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

108. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccccaggcgacccgcccccgcccc	Protospacer
*********** **.*********. **  *  

109. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

110. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccccaggcgacccgcccccgcccc	Protospacer
*********** **.*********. **  *  

111. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

112. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccccaggcgacccgcccccgcccc	Protospacer
*********** **.*********. **  *  

113. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccgcatgcgaccagcgccgcgatg	Protospacer
************** ****** **  * .*  *

114. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
ccgccgccgccccaggcgacccgcccctcgccc	Protospacer
*********** **.*********. *..**  

115. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP050100 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b3, complete sequence) position: , mismatch: 8, identity: 0.758

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
tgccttgccgacgccgatcgtcttgccggcaat	Protospacer
 ******.*****************.   *. *

116. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP053443 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eC, complete sequence) position: , mismatch: 8, identity: 0.758

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
tgccttgccgacgccgatcgtcttgccggcaat	Protospacer
 ******.*****************.   *. *

117. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 8, identity: 0.758

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
tgccttgccgacgccgatcttcttgccggcgat	Protospacer
 ******.*********** *****.   ** *

118. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 8, identity: 0.758

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
cgccttgccgacgccgatcttcttgccggcgat	Protospacer
 ******.*********** *****.   ** *

119. spacer 2.8|769217|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP013109 (Sinorhizobium americanum strain CFNEI 73 plasmid B, complete sequence) position: , mismatch: 8, identity: 0.758

cggggatcatgtcgatcagcggcgcgataaccg	CRISPR spacer
tgccgatcacgtcgatcagcggcgtgatatcga	Protospacer
.*  *****.**************.**** * .

120. spacer 2.8|769217|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 8, identity: 0.758

cggggatcatgtcgatcagcggcgcgataaccg	CRISPR spacer
tgccgatcacgtcgatcagcggcgcaatatcaa	Protospacer
.*  *****.***************.*** * .

121. spacer 2.8|769217|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP013053 (Sinorhizobium americanum CCGM7 plasmid B, complete sequence) position: , mismatch: 8, identity: 0.758

cggggatcatgtcgatcagcggcgcgataaccg	CRISPR spacer
tgccgatcacgtcgatcagcggcgtgatatcga	Protospacer
.*  *****.**************.**** * .

122. spacer 2.12|769479|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.765

cggtcgatcttgatgctgtgcatcgggggctcct	CRISPR spacer
ccgtcgatcttgatgctgggcatcggcatgccgt	Protospacer
* **************** ******* .  .* *

123. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP030762 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cgcgccacgcgtcgaagcccttgcgccagtcgca	Protospacer
* **   **********.******** *****  

124. spacer 2.18|769876|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_LR134451 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence) position: , mismatch: 8, identity: 0.765

cgcggtccacgccgctcgccgcgagcgccttcgt	CRISPR spacer
gggtgtccacgccgttcgccgcgagcacctccac	Protospacer
 *  **********.***********.***.*..

125. spacer 2.31|770731|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.758

cagggcgtgggcgccggccatgtcgtcggcgat	CRISPR spacer
cagggcgtgggcgccggccagttcgatcacgga	Protospacer
********************  *** . .**. 

126. spacer 2.31|770731|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.758

cagggcgtgggcgccggccatgtcgtcggcgat	CRISPR spacer
cagggcgtgggcgccggccagttcgatcacgga	Protospacer
********************  *** . .**. 

127. spacer 2.31|770731|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 8, identity: 0.758

cagggcgtgggcgccggccatgtcgtcggcgat	CRISPR spacer
cagggcgtgggcgccggccagttcgatcacgga	Protospacer
********************  *** . .**. 

128. spacer 2.31|770731|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_KR997898 (Mycobacterium avium subsp. hominissuis strain 88Br plasmid pMA100, complete sequence) position: , mismatch: 8, identity: 0.758

cagggcgtgggcgccggccatgtcgtcggcgat	CRISPR spacer
caccgcgtgggcggcggcgatgtcgtcgagggc	Protospacer
**  ********* **** *********. *..

129. spacer 2.31|770731|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 8, identity: 0.758

cagggcgtgggcgccggccatgtcgtcggcgat	CRISPR spacer
gcagtcggcggcgccggacaggtcgtcggcgat	Protospacer
  .* **  ******** ** ************

130. spacer 2.33|770863|35|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP027299 (Streptomyces sp. SGAir0924 plasmid unnamed_5) position: , mismatch: 8, identity: 0.771

atcagaccgtcggcgaggtgctcgccccccagctg	CRISPR spacer
accgcggcgtcggcgaggtgctcggccgccagccg	Protospacer
*.*. . ***************** ** *****.*

131. spacer 2.34|770930|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_LR134449 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 7, complete sequence) position: , mismatch: 8, identity: 0.758

ccgaggcgccggtcgagttcggcggtccagacg	CRISPR spacer
gcgcggcgccggtcgagttccgcggcgtcggcg	Protospacer
 ** **************** ****. . *.**

132. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 8, identity: 0.765

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
gatcgaggcgcaggccgccgccgccgggctcggc	Protospacer
*. .*  * *****.******************.

133. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 8, identity: 0.765

---ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
catagaggc---gcaggccgccgccgccgcgctcggc	Protospacer
   .** **   *****.*********** ******.

134. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NC_017805 (Deinococcus gobiensis I-0 plasmid P1, complete sequence) position: , mismatch: 8, identity: 0.765

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
gctggccgggctggtcgccgccgccgagctggcc	Protospacer
*   ******* **************.*** * .

135. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to MK433264 (Gordonia phage Tiamoceli, complete genome) position: , mismatch: 8, identity: 0.765

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
tgatcggcggcaggtcgccgccgccgggcacgtc	Protospacer
 ***    ********************* ** .

136. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to MT952843 (Gordonia phage Twonlo, complete genome) position: , mismatch: 8, identity: 0.765

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
tgatcggcggcaggtcgccgccgccgggcacgtc	Protospacer
 ***    ********************* ** .

137. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to MK977704 (Gordonia Terrae phage RoadKill, complete genome) position: , mismatch: 8, identity: 0.765

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
tgatcggcggcaggtcgccgccgccgggcacgtc	Protospacer
 ***    ********************* ** .

138. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to KR053200 (Gordonia phage GTE6, complete genome) position: , mismatch: 8, identity: 0.765

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
tgatcggcggcaggtcgccgccgccgggcacgtc	Protospacer
 ***    ********************* ** .

139. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 8, identity: 0.765

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
gcgtcgctggcaggtcgccgccgccggcgtcggc	Protospacer
* .*  * *******************  ****.

140. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 8, identity: 0.765

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
agatgccgggcaggtcgccgatgccgtcgccgtt	Protospacer
.******************* .****   .** *

141. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to GQ141189 (Bifidobacterium phage Bbif-1, complete sequence) position: , mismatch: 8, identity: 0.765

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
ggatgccgggcagatcgccaccgccaccgtcgcc	Protospacer
*************.*****.*****.   *** .

142. spacer 2.37|771128|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 8, identity: 0.758

ctgctcac---ccccgcggcggaacgccccgcggat	CRISPR spacer
---cccgcgtgacccgcggcggcacgccccggggat	Protospacer
   *.*.*    ********** ******** ****

143. spacer 2.45|771655|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022581 (Gordonia rubripertincta strain CWB2 plasmid pGCWB2, complete sequence) position: , mismatch: 8, identity: 0.765

gggccgagcgctggtggaccacg-----atctacagggc	CRISPR spacer
gggccgtgcgctggtggcccacgagggtatccac-----	Protospacer
****** ********** *****     ***.**     

144. spacer 2.51|772049|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006369 (Aureimonas sp. AU20 plasmid pAU20b, complete sequence) position: , mismatch: 8, identity: 0.758

gggggccacgatggcgccggagcgccggagaga	CRISPR spacer
ggtggcgacgatggcgccggagcggaagacgca	Protospacer
** *** *****************  .** . *

145. spacer 2.56|772375|35|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NC_011887 (Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence) position: , mismatch: 8, identity: 0.771

cctcttgc-tctcgacaaggctctcgacgccgccga	CRISPR spacer
-gtcgggcaactcgacaaggctctcgacgaggccgc	Protospacer
  **  **  *******************  **** 

146. spacer 3.1|1201296|31|NC_017080|CRT matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 8, identity: 0.742

cgcgtaccggcgtaccggggcctgcggcgta	CRISPR spacer
gtcgtagcggcgtaccggtgcctgcgggtcg	Protospacer
  **** *********** ********  ..

147. spacer 3.1|1201296|31|NC_017080|CRT matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 8, identity: 0.742

cgcgtaccggcgtaccggggcctgcggcgta	CRISPR spacer
gtcgtagcggcgtaccggtgcctgcgggtcg	Protospacer
  **** *********** ********  ..

148. spacer 7.1|1500525|29|NC_017080|CRISPRCasFinder matches to NZ_CP015090 (Pelagibaca abyssi strain JLT2014 plasmid pPABY2, complete sequence) position: , mismatch: 8, identity: 0.724

ggctccaccgcgctgcgggtgtcgcgtgc	CRISPR spacer
ccctccaccgcgatgcgggtggcgccatt	Protospacer
  ********** ******** ***   .

149. spacer 7.1|1500525|29|NC_017080|CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.724

ggctccaccgcgctgcgggtgtcgcgtgc	CRISPR spacer
atcgtgcccgcgctgcaggtgtcgcgtgg	Protospacer
. * .  *********.*********** 

150. spacer 2.3|768888|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 9, identity: 0.727

tccgtccggccgcacctcctccggcatcgaagc	CRISPR spacer
cgaatccggacgcacctcctccggcagcgccgt	Protospacer
.  .***** **************** **  *.

151. spacer 2.3|768888|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 9, identity: 0.727

tccgtccggccgcacctcctccggcatcgaagc	CRISPR spacer
gccggccggccgcgcctcctccggcgcggtacg	Protospacer
 *** ********.***********.. * *  

152. spacer 2.4|768953|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.727

ccgccgccgccgcaagcgacccgctgcctgcag	CRISPR spacer
gttccgccgccgcatgcgacccgccgcgggcgc	Protospacer
 . *********** *********.**  **. 

153. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP050095 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b1, complete sequence) position: , mismatch: 9, identity: 0.727

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
tgccttgccgacgccgatcttcttgccggcaat	Protospacer
 ******.*********** *****.   *. *

154. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 9, identity: 0.727

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
tgccttgccgacaccgatcgtcttgccggcaat	Protospacer
 ******.****.************.   *. *

155. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NC_008381 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence) position: , mismatch: 9, identity: 0.727

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
tgccttgccgacgccgatcttcttgccggcaat	Protospacer
 ******.*********** *****.   *. *

156. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP025017 (Rhizobium leguminosarum strain Norway plasmid pRLN5, complete sequence) position: , mismatch: 9, identity: 0.727

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
tgctttgccgacgccgatcgtcttgccggcaat	Protospacer
 **.***.*****************.   *. *

157. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP049733 (Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence) position: , mismatch: 9, identity: 0.727

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
tgccttgccgacaccgatcgtcttgccggcaat	Protospacer
 ******.****.************.   *. *

158. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP048284 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence) position: , mismatch: 9, identity: 0.727

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
tgccttgccgacgccgatcttcttgccggcaat	Protospacer
 ******.*********** *****.   *. *

159. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP054026 (Rhizobium sp. JKLM12A2 plasmid pPR12A205, complete sequence) position: , mismatch: 9, identity: 0.727

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
tgccttgccgacgccgatcttcttgccggcaat	Protospacer
 ******.*********** *****.   *. *

160. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 9, identity: 0.727

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
tgccttgccgacgccgatcttcttgccggcaat	Protospacer
 ******.*********** *****.   *. *

161. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP053207 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence) position: , mismatch: 9, identity: 0.727

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
tgccttgccgacaccgatcgtcttgccggcaat	Protospacer
 ******.****.************.   *. *

162. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NC_012854 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505, complete sequence) position: , mismatch: 9, identity: 0.727

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
tgccttgccgacaccgatcgtcttgccggcaat	Protospacer
 ******.****.************.   *. *

163. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP018232 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.727

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
tgccttgccgacgccgatcttcttgccggcaat	Protospacer
 ******.*********** *****.   *. *

164. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP016291 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.727

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
tgccttgccgacgccgatcttcttgccggcaat	Protospacer
 ******.*********** *****.   *. *

165. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
cgccttgccgacaccgatcgtcttgccggcaat	Protospacer
 ******.****.************.   *. *

166. spacer 2.5|769018|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 9, identity: 0.727

ggccttgtcgacgccgatcgtcttgtgctcgct	CRISPR spacer
tgccttgccgacgccgatcttcttgccggcaat	Protospacer
 ******.*********** *****.   *. *

167. spacer 2.7|769149|36|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP018865 (Arthrobacter crystallopoietes strain DSM 20117 plasmid pLDW-10, complete sequence) position: , mismatch: 9, identity: 0.75

-gctgctgccgccgccggtgctggccccggtgctggc	CRISPR spacer
cgccatt-ccgccgccggtcctggtcccggtgctaat	Protospacer
 **...* *********** ****.*********...

168. spacer 2.12|769479|34|NC_017080|CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 9, identity: 0.735

cggtcgatcttgatgctgtgcatcgggggctcct	CRISPR spacer
cggtcgatcttgatgttgtggatcggcaggctgc	Protospacer
***************.**** ***** .* .. .

169. spacer 2.12|769479|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cggtcgatcttgatgctgtgcatcgggggctcct	CRISPR spacer
cggtcgatcttgatgttgtggatcggcaggctgc	Protospacer
***************.**** ***** .* .. .

170. spacer 2.12|769479|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cggtcgatcttgatgctgtgcatcgggggctcct	CRISPR spacer
cggtcgatcttgatgttgtggatcggcaggctgc	Protospacer
***************.**** ***** .* .. .

171. spacer 2.12|769479|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP034911 (Ensifer alkalisoli strain YIC4027 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cggtcgatcttgatgctgtgcatcgggggctcct	CRISPR spacer
cgctcgatcttgatgctgtgcgtccagccgtcgc	Protospacer
** ******************.** .*   ** .

172. spacer 2.12|769479|34|NC_017080|CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 9, identity: 0.735

cggtcgatcttgatgctgtgcatcgggggctcct	CRISPR spacer
cgctcgatcttgatgctgtgcgtccagccatcgc	Protospacer
** ******************.** .*   ** .

173. spacer 2.12|769479|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP015743 (Shinella sp. HZN7 plasmid pShin-07, complete sequence) position: , mismatch: 9, identity: 0.735

cggtcgatcttgatgctgtgcatcgggggctcct	CRISPR spacer
cgctcgatcttgatgctgtgcgtccagccgtcac	Protospacer
** ******************.** .*   ** .

174. spacer 2.12|769479|34|NC_017080|CRISPRCasFinder,CRT matches to NC_015597 (Sinorhizobium meliloti AK83 plasmid pSINME01, complete sequence) position: , mismatch: 9, identity: 0.735

cggtcgatcttgatgctgtgcatcgggggctcct	CRISPR spacer
cgctcgatcttgatgctgtgcgtccagccgtcgc	Protospacer
** ******************.** .*   ** .

175. spacer 2.12|769479|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP024309 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3b, complete sequence) position: , mismatch: 9, identity: 0.735

cggtcgatcttgatgctgtgcatcgggggctcct	CRISPR spacer
cgctcgatcttgatgctgtgcgtccagccatcgc	Protospacer
** ******************.** .*   ** .

176. spacer 2.12|769479|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP021807 (Sinorhizobium meliloti strain T073 plasmid accessoryA, complete sequence) position: , mismatch: 9, identity: 0.735

cggtcgatcttgatgctgtgcatcgggggctcct	CRISPR spacer
cgctcgatcttgatgctgtgcgtccagccgtcgc	Protospacer
** ******************.** .*   ** .

177. spacer 2.13|769545|34|NC_017080|CRISPRCasFinder,CRT matches to NC_021347 (Rhodococcus phage E3, complete genome) position: , mismatch: 9, identity: 0.735

ggaagccggcgtccgcctcgacctcgaaacagtt	CRISPR spacer
gcgagctggcgtccgccttgacctcgaggtagcc	Protospacer
* .***.***********.********...**..

178. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP031079 (Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
acaggatcgcgtccaagtccatgcgcgagccttc	Protospacer
 . ********** ****** ********.*  .

179. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgcttggcctc	Protospacer
*.************* **** *****  * *  .

180. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

181. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgcttggcctc	Protospacer
*.************* **** *****  * *  .

182. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgcttggcctc	Protospacer
*.************* **** *****  * *  .

183. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

184. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

185. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

186. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

187. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

188. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

189. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

190. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgcttggcctc	Protospacer
*.************* **** *****  * *  .

191. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

192. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

193. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

194. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgcttggcctc	Protospacer
*.************* **** *****  * *  .

195. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgcttggcctc	Protospacer
*.************* **** *****  * *  .

196. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgcttggcctc	Protospacer
*.************* **** *****  * *  .

197. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

198. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgcttggcctc	Protospacer
*.************* **** *****  * *  .

199. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgcttggcctc	Protospacer
*.************* **** *****  * *  .

200. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgcttggcctc	Protospacer
*.************* **** *****  * *  .

201. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

202. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

203. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

204. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

205. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

206. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

207. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

208. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

209. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgcttggcctc	Protospacer
*.************* **** *****  * *  .

210. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

211. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

212. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

213. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

214. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

215. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

216. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

217. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgcttggcctc	Protospacer
*.************* **** *****  * *  .

218. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

219. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

220. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

221. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

222. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

223. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

224. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

225. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

226. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgcttggcctc	Protospacer
*.************* **** *****  * *  .

227. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

228. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

229. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

230. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

231. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

232. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

233. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

234. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

235. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

236. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

237. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

238. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

239. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

240. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

241. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

242. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

243. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

244. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

245. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

246. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

247. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

248. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

249. spacer 2.17|769810|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.735

ctcggatcgcgtcgaagtccttgcgcgagtcgat	CRISPR spacer
cccggatcgcgtcgatgtccatgcgccgggcctc	Protospacer
*.************* **** ***** .* *  .

250. spacer 2.18|769876|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cgcggtccacgccgctcgccgcgagcgccttcgt	CRISPR spacer
cgatggattcgccgcgcgccgcgcgcgccttcgc	Protospacer
**  *  . ****** ******* *********.

251. spacer 2.18|769876|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 9, identity: 0.735

cgcggtccacgccgctcgccgcgagcgccttcgt	CRISPR spacer
cgggcatgtcgccgctcgccgcgatcgccatcgc	Protospacer
** *  .  *************** **** ***.

252. spacer 2.18|769876|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 9, identity: 0.735

cgcggtccacgccgctcgccgcgagcgccttcgt	CRISPR spacer
cgggcatgtcgccgctcgccgcgatcgccatcgc	Protospacer
** *  .  *************** **** ***.

253. spacer 2.23|770202|34|NC_017080|CRISPRCasFinder,CRT matches to CP054917 (Streptomyces sp. NA02950 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ggggggtgcgaccgacccgcggtcgatgtgagga	CRISPR spacer
cggggctgcgaccggcccgcggtcgacgccggcg	Protospacer
 **** ********.***********.*. .* .

254. spacer 2.24|770268|34|NC_017080|CRISPRCasFinder,CRT matches to JN698994 (Mycobacterium phage DS6A, complete genome) position: , mismatch: 9, identity: 0.735

ccccgtggatcgtccgcgtctcggcgttcaccga	CRISPR spacer
tcgcctggatcgtccgtgtgtcggcgttcgcttc	Protospacer
.* * ***********.** *********.*.  

255. spacer 2.26|770399|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP041930 (Klebsiella pneumoniae strain 18-2374 plasmid pSECR18-2374C, complete sequence) position: , mismatch: 9, identity: 0.735

cctcggggatcgtcgccgccgcgtccgtcgtggt	CRISPR spacer
aaccggggatcgtcgccgccgggtcggtcccctt	Protospacer
  .****************** *** *** .  *

256. spacer 2.26|770399|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP043383 (Enterobacter hormaechei subsp. xiangfangensis strain WCHEX045001 plasmid pNDM1_045001, complete sequence) position: , mismatch: 9, identity: 0.735

cctcggggatcgtcgccgccgcgtccgtcgtggt	CRISPR spacer
aaccggggatcgtcgccgccgggtcggtcccctt	Protospacer
  .****************** *** *** .  *

257. spacer 2.26|770399|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP049048 (Enterobacter hormaechei strain Y233 plasmid p233-142, complete sequence) position: , mismatch: 9, identity: 0.735

cctcggggatcgtcgccgccgcgtccgtcgtggt	CRISPR spacer
aaccggggatcgtcgccgccgggtcggtcccctt	Protospacer
  .****************** *** *** .  *

258. spacer 2.26|770399|34|NC_017080|CRISPRCasFinder,CRT matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cctcggggatcgtcgccgccgcgtccgtcgtggt	CRISPR spacer
gcctccggatcggcgccgccgcgcccgtcgtcgc	Protospacer
 *..  ****** **********.******* *.

259. spacer 2.26|770399|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP014797 (Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence) position: , mismatch: 9, identity: 0.735

cctcggggatcgtcgccgccgcgtccgtcgtggt	CRISPR spacer
tctcgggcatcgacgccgccgcgtcctcgatgaa	Protospacer
.****** **** ************* . .**. 

260. spacer 2.26|770399|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP029359 (Azospirillum sp. CFH 70021 plasmid unnamed4) position: , mismatch: 9, identity: 0.735

cctcggggatcgtcgccgccgcgtccgtcgtggt	CRISPR spacer
catcggggatcgccgccgccgcatccccgccgtt	Protospacer
* **********.*********.*** .  .* *

261. spacer 2.26|770399|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP029360 (Azospirillum sp. CFH 70021 plasmid unnamed5) position: , mismatch: 9, identity: 0.735

cctcggggatcgtcgccgccgcgtccgtcgtggt----	CRISPR spacer
gggcggcgatcgccgccgccgcgtccg----ggtcctc	Protospacer
   *** *****.**************    ***    

262. spacer 2.26|770399|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 9, identity: 0.735

-------cctcggggatcgtcgccgccgcgtccgtcgtggt	CRISPR spacer
agtacgtcctcgg-------cggcgccgcgtccgtcgtggg	Protospacer
       ******       ** ***************** 

263. spacer 2.31|770731|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP032928 (Agrobacterium tumefaciens strain 1D1460 plasmid pAt1D1460, complete sequence) position: , mismatch: 9, identity: 0.727

cagggcgtgggcgccggccatgtcgtcggcgat	CRISPR spacer
ttcgaggcgggtgccggccatgtcggcggcgaa	Protospacer
.  *. *.***.************* ****** 

264. spacer 2.31|770731|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 9, identity: 0.727

cagggcgtgggcgccggccatgtcgtcggcgat	CRISPR spacer
ttcgaggcgggcgccggccatatcggcggcgag	Protospacer
.  *. *.*************.*** ****** 

265. spacer 2.34|770930|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 9, identity: 0.727

ccgaggcgccggtcgagttcggcggtccagacg	CRISPR spacer
ccgaggcgccggtcgtcttcggcgggatgcgcc	Protospacer
***************  ********  .. .* 

266. spacer 2.34|770930|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 9, identity: 0.727

ccgaggcgccggtcgagttcggcggtccagacg	CRISPR spacer
ccgaggcgccggtcgtcttcggcgggatgcgcc	Protospacer
***************  ********  .. .* 

267. spacer 2.34|770930|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 9, identity: 0.727

ccgaggcgccggtcgagttcggcggtccagacg	CRISPR spacer
ccgatgcgccggtcgagttccgcgtgcagggaa	Protospacer
**** *************** ***  * .*. .

268. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 9, identity: 0.735

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
catggccgggcaggtcgacgccgccgggctgacg	Protospacer
 .  ************* ************ .  

269. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.735

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
catggccgggcaggtcgacgccgccgggctgacg	Protospacer
 .  ************* ************ .  

270. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.735

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
catggccgggcaggtcgacgccgccgggctgacg	Protospacer
 .  ************* ************ .  

271. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP045122 (Rubrobacter sp. SCSIO 52915 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
gcatgccggacatgtcgccgccgccggtcgtctc	Protospacer
* *******.** ************** * .  .

272. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP040720 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
tgggccggggccggtcgccgccgcctggctcgag	Protospacer
 *.  * **** ************* ******. 

273. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NC_011887 (Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence) position: , mismatch: 9, identity: 0.735

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
agccgccgggctggtcgcggccgccgggcgcctg	Protospacer
.* .******* ****** ********** *   

274. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
ggccgccgagcaggtcgccgctgccgggggcttc	Protospacer
** .****.************.******  *  .

275. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.735

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
ccagggcgggcagggcgccgtcgccgggctggcg	Protospacer
  * * ******** *****.********* *  

276. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 9, identity: 0.735

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
ggatgccgggctgatcgccgccgcgaatttcatt	Protospacer
*********** *.********** .. .**. *

277. spacer 2.38|771193|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.735

cgaactc---gaacgccgccgactcgtccgcgctcgt	CRISPR spacer
---gctccagcaacgccgccgcctcgtccgctctccc	Protospacer
   .***    ********** ********* *** .

278. spacer 2.49|771918|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 9, identity: 0.735

ccccgcccgcggctacaccggtcgccggcggctt	CRISPR spacer
acgcggttgcggcaacaccggtctccggcggcgc	Protospacer
 * ** ..***** ********* ******** .

279. spacer 2.51|772049|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 9, identity: 0.727

gggggccacgatggcgccggagcgccggagaga	CRISPR spacer
ggaggccacgatggcgccgtagcgcaccgcggt	Protospacer
**.**************** *****   . .* 

280. spacer 2.51|772049|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.727

gggggccacgatggcgccggagcgccggagaga	CRISPR spacer
gagggccaccatggtgccggagcgcccacccgg	Protospacer
*.******* ****.*********** .   *.

281. spacer 2.55|772310|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 9, identity: 0.727

gaggggccatcgtcttccgcgccgccatcgtca	CRISPR spacer
ccatcgcggtcgtcttcggcgccgccctcgtca	Protospacer
  .  ** .******** ******** ******

282. spacer 2.58|772507|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018236 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed8) position: , mismatch: 9, identity: 0.735

ggctg--taggtgcatcccaccgcccacgccgacgc	CRISPR spacer
--ccgacgaggtgcatctcaacgcccacgccgccat	Protospacer
  *.*   *********.** *********** *..

283. spacer 11.1|2506144|31|NC_017080|CRISPRCasFinder matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 9, identity: 0.71

tgttgcctgacttcttcgcttcttcgcttct	CRISPR spacer
gtttgccggacttcttcgcttctttaagtgc	Protospacer
  ***** ****************..  * .

284. spacer 2.3|768888|33|NC_017080|CRISPRCasFinder,CRT matches to NC_012521 (Rhodococcus opacus B4 plasmid pROB02, complete sequence) position: , mismatch: 10, identity: 0.697

tccgtccggccgcacctcctccggcatcgaagc	CRISPR spacer
ggactccggccgcacctccaccggcttcatggg	Protospacer
    *************** ***** **. .* 

285. spacer 2.18|769876|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP031082 (Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence) position: , mismatch: 10, identity: 0.706

cgcggtccacgccgctcgccgcgagcgccttcgt	CRISPR spacer
cgcggtccacgccactggccgcgaaatcgtcgaa	Protospacer
*************.** *******.  * *. . 

286. spacer 2.18|769876|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP020441 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

cgcggtccacgccgctcgccgcgagcgccttcgt	CRISPR spacer
cgcggtccacgccactggccgcgaaatcgtcgaa	Protospacer
*************.** *******.  * *. . 

287. spacer 2.18|769876|34|NC_017080|CRISPRCasFinder,CRT matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 10, identity: 0.706

cgcggtccacgccgctcgccgcgagcgccttcgt	CRISPR spacer
tctgcatcgtgccgctcgccgcaatcgccttcgt	Protospacer
. .*  .*..************.* *********

288. spacer 2.18|769876|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP044080 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.706

cgcggtccacgccgctcgccgcgagcgccttcgt	CRISPR spacer
cgcggtccacgccactggccgcgaaatcgtcgaa	Protospacer
*************.** *******.  * *. . 

289. spacer 2.25|770334|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.697

gaacatcgtgatcccgtcgaccacccgcgacgg	CRISPR spacer
attgatcgtgatgccgtcgaccaccagcgcgcc	Protospacer
.   ******** ************ ***    

290. spacer 2.26|770399|34|NC_017080|CRISPRCasFinder,CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 10, identity: 0.706

cctcggggatcgtcgccgccgcgtccgtcgtggt	CRISPR spacer
aggtgtggatcgtcgccgccgcctccatcgccgg	Protospacer
   .* **************** ***.***. * 

291. spacer 2.26|770399|34|NC_017080|CRISPRCasFinder,CRT matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 10, identity: 0.706

cctcggggatcgtcgccgccgcgtccgtcgtggt	CRISPR spacer
aggtgtggatcgtcgccgccgcctccatcgccgg	Protospacer
   .* **************** ***.***. * 

292. spacer 2.30|770664|35|NC_017080|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.714

gtgggcaggtacgtcggcgtctcgcccgggcgggc	CRISPR spacer
cacggcaggtacgtctgcgtcttgcccgcgacgaa	Protospacer
   ************ ******.***** *  *. 

293. spacer 2.31|770731|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_LR134468 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 26, complete sequence) position: , mismatch: 10, identity: 0.697

cagggcgtgggcgccggccatgtcgtcggcgat	CRISPR spacer
gctcgcgggcgcgccggccatgtcgtcggtcgc	Protospacer
    *** * *******************. ..

294. spacer 2.31|770731|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_LR134461 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 19, complete sequence) position: , mismatch: 10, identity: 0.697

cagggcgtgggcgccggccatgtcgtcggcgat	CRISPR spacer
gagggcgtggccggcggccatgtcgagcagggc	Protospacer
 ********* ** ***********   . *..

295. spacer 2.31|770731|33|NC_017080|CRISPRCasFinder,CRT matches to MN103533 (Mycobacterium phage Weirdo19, complete genome) position: , mismatch: 10, identity: 0.697

cagggcgtgggcgccggccatgtcgtcggcgat	CRISPR spacer
ttgcatttgggcggcggccatgtcggcggcggc	Protospacer
. * .. ****** *********** *****..

296. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 10, identity: 0.706

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
catcgccgggcaggtcgatgccgccgggctgacg	Protospacer
 . .************* .*********** .  

297. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 10, identity: 0.706

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
ccgtggcgggcagctcgccgccgccggtgacgtg	Protospacer
  .** ******* *************   **  

298. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NC_007950 (Polaromonas sp. JS666 plasmid 2, complete sequence) position: , mismatch: 10, identity: 0.706

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
gcatgcagggcaggccgccgccgccgccgaagag	Protospacer
* **** *******.***********     *. 

299. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NC_015383 (Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence) position: , mismatch: 10, identity: 0.706

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
ggcaagtcggcaggacgccgccgccggcctcgca	Protospacer
**  . . ****** ************ ****  

300. spacer 2.47|771786|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.697

ggcccggatgggcgacttcctgccccgcctgcg	CRISPR spacer
cctcattatgggcgaattcctgcgccgcctgga	Protospacer
  .*   ******** ******* ******* .

301. spacer 2.47|771786|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 10, identity: 0.697

ggcccggatgggcgacttcctgccccgcctgcg	CRISPR spacer
cctcatcatgggcgaattcctgcgccgcctgga	Protospacer
  .*   ******** ******* ******* .

302. spacer 2.47|771786|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.697

ggcccggatgggcgacttcctgccccgcctgcg	CRISPR spacer
cctcatcatgggcgaattcctgcgccgcctgga	Protospacer
  .*   ******** ******* ******* .

303. spacer 2.47|771786|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.697

ggcccggatgggcgacttcctgccccgcctgcg	CRISPR spacer
cctcatcatgggcgaattcctgcgccgcctgga	Protospacer
  .*   ******** ******* ******* .

304. spacer 2.47|771786|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 10, identity: 0.697

ggcccggatgggcgacttcctgccccgcctgcg	CRISPR spacer
cctcatcatgggcgaattcctgcgccgcctgga	Protospacer
  .*   ******** ******* ******* .

305. spacer 2.49|771918|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 10, identity: 0.706

ccccgcccgcggctacaccggtcgccggcggctt	CRISPR spacer
gggtgcgcgtggctacaccggtcgccggccccaa	Protospacer
   .** **.*******************  *  

306. spacer 2.51|772049|33|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134454 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence) position: , mismatch: 10, identity: 0.697

gggggccacgatggcgccggagcgccggagaga	CRISPR spacer
accggccacgatggcggcggtgcgccgcggccg	Protospacer
.  ************* *** ****** .*  .

307. spacer 2.53|772178|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134459 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence) position: , mismatch: 10, identity: 0.706

agaccaac--ccgtagtcgctcgcggcctcgctgga	CRISPR spacer
--ttcgtctgccggagtcgctcgcggccccgctgcg	Protospacer
   .*. *  *** **************.***** .

308. spacer 2.56|772375|35|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046053 (Methylocystis heyeri strain H2 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

cctcttgctctcgacaaggctctcgacgccgccga	CRISPR spacer
ctcgccacgctcgacaaggcgctcgccgccgccgc	Protospacer
*.. ...* *********** **** ******** 

309. spacer 2.61|772707|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134459 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence) position: , mismatch: 10, identity: 0.706

agaccaac--ccgtagtcgctcgcggcctcgctgga	CRISPR spacer
--ttcgtctgccggagtcgctcgcggccccgctgcg	Protospacer
   .*. *  *** **************.***** .

310. spacer 11.1|2506144|31|NC_017080|CRISPRCasFinder matches to AM157767 (Uncultured bacterium IncP-1gamma plasmid QKH54 complete genome) position: , mismatch: 10, identity: 0.677

tgttgcctgacttcttcgcttcttcgcttct	CRISPR spacer
gaacgcctgacttcttcgatacttcgccagg	Protospacer
 . .************** * ******.   

311. spacer 2.3|768888|33|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 11, identity: 0.667

tccgtccggccgcacctcctccggcatcgaagc	CRISPR spacer
cgatctcgcccgcaccgcctccggcatcgattg	Protospacer
.   ..** ******* *************   

312. spacer 2.6|769083|34|NC_017080|CRISPRCasFinder,CRT matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 11, identity: 0.676

ggcagggtccgccgcggaaggacctcgacccggc	CRISPR spacer
atgtgatgccgccgcggaagctcctcgacccgcg	Protospacer
.   *.  ************  **********  

313. spacer 2.36|771062|34|NC_017080|CRISPRCasFinder,CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

ggatgccgggcaggtcgccgccgccgggctcggt	CRISPR spacer
cacccacacgcaggtcgccgccgaccggctcggc	Protospacer
 . .  *. ************** * *******.

314. spacer 2.38|771193|34|NC_017080|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 12, identity: 0.647

cgaactcgaacgccgccgactcgtccgcgctcgt	CRISPR spacer
acgcctcgaacgccgacggctcgtccgccgcgaa	Protospacer
  . *********** **.*********  . .