CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_017549	Pseudomonas aeruginosa NCGM2.S1 chromosome 1, complete sequence	3 crisprs	DEDDh,PD-DExK,csa3,WYL,csx1,DinG,cas3	0	1	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_017549_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017549_1

60696-60843

Orphan

Consensus_repeat	Method
GGAGGCTCCAGCGCAGACGCCGTAAGGAGGCTCCGCGATGCCTAGGCAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_017549_1

>merge|NC_017549|1|60696-60843|CRISPRCasFinder
GGAGGCTCCAGCGCAGACGCCGTAAGGAGGCTCCGCGATGCCTAGGCAAGAGAACAAAGGGGACAGATTTATTTTCCCTACTCTAGTTTTCTAAGCAAGGAGGCTCCAGCGCAGCCGCCGTAAGGAGGCTCCGCGATGCCTAGGCAAG

>NC_017549|1|1|60696-60843|CRISPRCasFinder
GGAGGCTCCAGCGCAGACGCCGTAAGGAGGCTCCGCGATGCCTAGGCAAG	AGAACAAAGGGGACAGATTTATTTTCCCTACTCTAGTTTTCTAAGCAA
GGAGGCTCCAGCGCAGCCGCCGTAAGGAGGCTCCGCGATGCCTAGGCAAG

Protein	Signature genes	Signature genes Name	Protein_function
NC_017549.1\|WP_003097347.1\|40667_40895_+\|DUF1161-domain-containing-protein	unknown	unknown	gnl\|CDD\|369019
NC_017549.1\|WP_003097337.1\|37165_37972_-\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
NC_017549.1\|WP_123788640.1\|54605_55007_+\|hypothetical-protein	unknown	unknown	unknown
NC_017549.1\|WP_086937300.1\|59401_60564_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NC_017549.1\|WP_003083536.1\|61207_61603_+\|hypothetical-protein	unknown	unknown	unknown
NC_017549.1\|WP_003083573.1\|66375_67041_+\|DUF799-domain-containing-protein	unknown	unknown	gnl\|CDD\|368539
NC_017549.1\|WP_173399892.1\|53997_54609_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|316921
NC_017549.1\|WP_003083555.1\|63439_64813_+\|T3SS-effector-bifunctional-cytotoxin-exoenzyme-T	unknown	unknown	gnl\|CDD\|227872
NC_017549.1\|WP_014603455.1\|41192_42881_+\|two-partner-secretion-system-transporter-TpsB2	unknown	unknown	gnl\|CDD\|225387
NC_017549.1\|WP_003083582.1\|69991_70132_+\|hypothetical-protein	unknown	unknown	unknown
NC_017549.1\|WP_003097345.1\|40268_40484_+\|dodecin-family-protein	unknown	unknown	gnl\|CDD\|225896
NC_017549.1\|WP_003083577.1\|67720_69229_-\|hypothetical-protein	unknown	unknown	unknown
NC_017549.1\|WP_003083569.1\|66025_66379_+\|DUF4810-domain-containing-protein	unknown	unknown	gnl\|CDD\|226710
NC_017549.1\|WP_003083575.1\|67055_67439_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NC_017549.1\|WP_003083584.1\|70193_70331_+\|hypothetical-protein	unknown	unknown	unknown
NC_017549.1\|WP_003083559.1\|65308_65995_+\|CsgG/HfaB-family-protein	unknown	unknown	gnl\|CDD\|224379
NC_017549.1\|WP_071533944.1\|55461_55677_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235372
NC_017549.1\|WP_003097340.1\|37968_39177_-\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288
NC_017549.1\|WP_003083553.1\|61867_63121_-\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|225715
NC_017549.1\|WP_003097343.1\|39280_40168_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176171

Protein	Function_ID	Function_description	E-value
NC_017549.1\|WP_003097347.1\|40667_40895_+\|DUF1161-domain-containing-protein	gnl\|CDD\|369019	pfam06649, DUF1161, Protein of unknown function (DUF1161). This family consists of several short, hypothetical bacterial proteins of unknown function.	2.11491e-24
NC_017549.1\|WP_003097337.1\|37165_37972_-\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	3.5891e-144
NC_017549.1\|WP_086937300.1\|59401_60564_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.44652e-87
NC_017549.1\|WP_003083573.1\|66375_67041_+\|DUF799-domain-containing-protein	gnl\|CDD\|368539	pfam05643, DUF799, Putative bacterial lipoprotein (DUF799). This family consists of several bacterial proteins of unknown function. Some of the family members are described as putative lipoproteins.	2.9667e-121
NC_017549.1\|WP_173399892.1\|53997_54609_+\|hypothetical-protein	gnl\|CDD\|316921	pfam14437, MafB19-deam, MafB19-like deaminase. A member of the nucleic acid/nucleotide deaminase superfamily prototyped by Neisseria MafB19. Members of this family are present in a wide phyletic range of bacteria and are predicted to function as toxins in bacterial polymorphic toxin systems.	2.66547e-11
NC_017549.1\|WP_003083555.1\|63439_64813_+\|T3SS-effector-bifunctional-cytotoxin-exoenzyme-T	gnl\|CDD\|227872	COG5585, COG5585, NAD+--asparagine ADP-ribosyltransferase [Signal transduction mechanisms].	1.87747e-56
NC_017549.1\|WP_014603455.1\|41192_42881_+\|two-partner-secretion-system-transporter-TpsB2	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	9.26606e-164
NC_017549.1\|WP_003097345.1\|40268_40484_+\|dodecin-family-protein	gnl\|CDD\|225896	COG3360, COG3360, Uncharacterized conserved protein [Function unknown].	6.39458e-35
NC_017549.1\|WP_003083569.1\|66025_66379_+\|DUF4810-domain-containing-protein	gnl\|CDD\|226710	COG4259, COG4259, Uncharacterized protein conserved in bacteria [Function unknown].	2.32647e-62
NC_017549.1\|WP_003083575.1\|67055_67439_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.28572e-09
NC_017549.1\|WP_003083559.1\|65308_65995_+\|CsgG/HfaB-family-protein	gnl\|CDD\|224379	COG1462, CsgG, Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane].	3.72394e-88
NC_017549.1\|WP_071533944.1\|55461_55677_+\|hypothetical-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	2.45371e-05
NC_017549.1\|WP_003097340.1\|37968_39177_-\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
NC_017549.1\|WP_003083553.1\|61867_63121_-\|MgtC/SapB-family-protein	gnl\|CDD\|225715	COG3174, COG3174, Predicted membrane protein [Function unknown].	7.51308e-88
NC_017549.1\|WP_003097343.1\|39280_40168_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176171	cd08482, PBP2_TrpI, The C-terminal substrate binding domain of LysR-type transcriptional regulator TrpI, which is involved in control of tryptophan synthesis, contains type 2 periplasmic binding fold. TrpI and indoleglycerol phosphate (InGP), are required to activate transcription of the trpBA, the genes for tryptophan synthase. The trpBA is induced by the InGp substrate, rather than by tryptophan, but the exact mechanism of the activation event is not known. This substrate-binding domain of TrpI shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.34631e-98

>NC_017549.1|WP_086937300.1|59401_60564_-|IS3-family-transposase
MSKQRRTFSAEFKREAAALVLDQGYSHIDACRSLGVVDSALRRWVKQLEAERQGVTPKSKALTPEQQKIQELEARINRLEREKAIFKKGYRSLDVGRTRSYALIDQLSEQESVEVVCSAFDVARSCYYVHRLRRRRVDARRVALRSQVNQLFSQSRGSAGSRSILGMLREEGVTIGRFRVRRLMRELGLVSKQPGSHAYKQATVERPDIPNRLNREFATEHPNQVWCGDITYVWAQGRWHYLAAVLDLHTRRVIGWAFSAKPDAELVIKALDMAYEQRGKPQQVLFHSDQGSQYASRLFRQRLWRYRMQQSMSRRGNCWDNSPMERLFRSLKSEWVPSTGYLTAQEAQRDISHYLMHRYNWIRPHQFNDGLPPAVAEEKLNPLSGMG
>NC_017549.1|WP_071533944.1|55461_55677_+|hypothetical-protein
MAWLDEGLSRVNQIRRGAIECPDWSRDSWGVELRNGMARIYSLYDEDCSAAIALDDFERALLGWKRFIQAD
>NC_017549.1|WP_123788640.1|54605_55007_+|hypothetical-protein
MIVLGGYLIAPGAKRTQFPVMSDPDEEEVLEALSKLRHSSGVLVLRVKPEPEIGAYEVALHAENGRFIVMLSQHAEDGEHEVFTLRGAGEGNGFTYILGEAYPMAAVTENFGLICNCFKKFLLERKVSSDVWV
>NC_017549.1|WP_173399892.1|53997_54609_+|hypothetical-protein
MRKNGATAEEITQAQRDLAQGQGFDGVQPANEFIKAWGEAMVAEAAGLGIVAGLGRFGLWGAKGATPVVTAEGRIGNSVFTDVNQTARPAAQANPNQPTLIADRVDAKIAAKGTPHPNGNMADAHAEIGVIQKAFNEGKTVGSDMTMNVVGKDVCGYCRGDIAAAASKSGLKSLTIQAKDDITGLPKTYYWEVGMKSIREKKI
>NC_017549.1|WP_014603455.1|41192_42881_+|two-partner-secretion-system-transporter-TpsB2
MALHRLAFIFLCLPLMASAAPFTSPGDRDLIRDRQQRLLDEQRKRLEELQQLPGKGAPAAADASGDDERCFEIRRIELEGAGHLDESARRQLLAPYQGRCLGVGQLNALLKAVTDHYLDRGYVTTRAYLPQQDLASGTLRIIVVEGRLEGLDSSALASPRELAMSFPGRTGELLDLRELEQLVDQLSRLPSRQAQLELVPGSEVGGSRVRLKGERDKPWRVSATRNNDGDVSTGEQQMGLGLDWDSPLGLADQLNLRANRDAVTDRWRHSDSQSLFYSLPWGWWTFTYGYSQSDYRTRNEASGFPFKLDGDSRSHQFRAERVLHRDGVSKTAMSLGLSHQRTNNYVEDTRLEDQSTRITETQLGFNHGRRIGSGFVNLDLGWQQGIGALGAQGRGHPQAGDPNARYDKYSLTLSYLQPFQLWGERFSFDSLATGQRSEDVLFSPQRISLGGNSSVRGFKDQTLTGDSGGYWRNQLRWRRAVEWAPLRPWLQEYGVAFAYDVGVIRHDRYNDGASGRMSGNAIELDARGRYFAASVGFARSLERPSAIERREHPIYFRVDAFF
>NC_017549.1|WP_003097347.1|40667_40895_+|DUF1161-domain-containing-protein
MFMKKLMLAVGLFAVAGSAFAAKPCEELKAEIDAKIKANGVPAYTLEIVDKGSVTDKKVVGTCDGGTKEIVYQRG
>NC_017549.1|WP_003097345.1|40268_40484_+|dodecin-family-protein
MSNHHTYKKIELVGSSKTSIEDAINNALAEAAKSIQHLEWFEVVDTRGHIENGAVGHYQVTLKVGFRIANS
>NC_017549.1|WP_003097343.1|39280_40168_+|LysR-family-transcriptional-regulator
MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLEDDLGVALFGKDGRGVKLTDSGVRLRDVCGDAFERLRGVCAELRRQTAEAPFVLGVPGSLLARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFELAPERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQAWPAWAASQGLAAEALRYGQGFEHLYYLLEAAVAGLGVAIAPEALVRDDLAAGRLAAPWGFIETDARLALWVPARLHDPRAGRLAQWLREQLAG
>NC_017549.1|WP_003097340.1|37968_39177_-|tryptophan-synthase-subunit-beta
MTSYRNGPDAKGLFGRFGGQYVAETLMPLILDLAREYEKAKDDPAFQEELAYFQRDYVGRPSPLYFAERLTEHCGGAKIYLKREELNHTGAHKINNCIGQILLARRMGKKRIIAETGAGMHGVATATVAARFGLQCVIYMGTTDIDRQQANVFRMKLLGAEVIPVTAGTGTLKDAMNEALRDWVTNVDSTFYLIGTVAGPHPYPAMVRDFQAVIGKETREQLAEKEGRLPDSLVACIGGGSNAMGLFHPFLDDAGVQIVGVEAAGHGIDTGKHAASLNGGVPGVLHGNRTFLLQDADGQIIDAHSISAGLDYPGIGPEHAWLHDTGRVEYTSITDDEALEAFHTCCRLEGIIPALESSHALAEVFKRAPSLPKEHIMVVNLSGRGDKDMQTVMHHMQQESKA
>NC_017549.1|WP_003097337.1|37165_37972_-|tryptophan-synthase-subunit-alpha
MSRLQTRFAQLKQENRAALVTFVTAGDPDYASSLEILKGLPAAGADVIELGMPFTDPMADGPAIQLANIRALDGGQTLARTLQMVREFRSGDSETPLVLMGYFNPIHHYGVERFIAEAKEVGVDGLIVVDLPPEHNEDLCHPAQAAGLDFIRLTTPTTGDQRLPTVLEGSSGFVYYVSVAGVTGANAATLEHVEEAVARLRRHTDLPIGIGFGIRSAEHAAAVARLADGVVVGSALIDRIAKARDNAQAVKDVLALCGELAEGVRNAR
>NC_017549.1|WP_003083536.1|61207_61603_+|hypothetical-protein
MPVLALRLTALAALAISVSGCVMEAYGSRARSDAQSWIGLPIQDVIKRFGEPERVTGDAARQKYVWKEYENYSHDYDYTYYEQGHGNTPNSSVLNQKTGTANQSGYYTCIYEFFADASGRVVDATARGECR
>NC_017549.1|WP_003083553.1|61867_63121_-|MgtC/SapB-family-protein
MTLSLDLLLSLCTALAIGLLIGAERGWQERDHEDARQIAGIRTFSLAGLLGGFATLLAGELGSAVWVALLLALAALAVAGYVSDVRRGGDQGMTTEIALLMTFLLGSLALTEQRLLAAAGGIVLTLLLSLKDKLHALLKRLTAEELSGTLKLLFISVVLLPVLPNQGYGPWAFFNPYLTWWMVVLIAALGFSAYLAIRLIGSRKGLLLTAVLGGLVSSTVMTLTLARLRERMPDALLACALLATSALMFPRILVEIGAIHPALLKELALPFAATTLVYLGGTLFHALRGGRASQEAPDEPGLRNPFELLPALRFAALLSAILLLVEVGRRLFGDAGIYAVALLSGLADVDAITLSLARAAQGELDPGVASRGIALAALSNSLVKAGLVVLVGGKRLALQTLPFSLAGLLVGALLILL
>NC_017549.1|WP_003083555.1|63439_64813_+|T3SS-effector-bifunctional-cytotoxin-exoenzyme-T
MHIQSSQQNPSFVAELSQAVAGRLGQVEARQVATPREAQQLAQRQEAPKGEGLLSRLGAALARPFVAIIEWLGKLLGSRAHAATQAPLSRQDAPPAASLSAAEIKQMMLQKALPLTLGGLGKASELATLTAERLAKDHTRLASGDGALRSLATALVGIRDGSLIEASRTQAARLLEQSVGGIALQQWGTAGGAASQHVLSASPEQLREIAVQLHAVMDKVALLRHAVESEVKGEPVDKALADGLVEHFGLEAEQYLGEHPDGPYSDAEVMALGLYTNGEYQHLNRSLRQGRELDAGQALIDRGMSAAFEKSGPAEQVVKTFRGTQGRDAFEAVKEGQVGHDAGYLSTSRDPSVARSFAGLGTITTLFGRSGIDVSEISIEGDEQEILYDKGTDMRVLLSAKDGQGVTRRVLEEATLGERSGHSEGLLDALDLATGTDRSGKPQEQDLRLRMRGLDLA
>NC_017549.1|WP_003083559.1|65308_65995_+|CsgG/HfaB-family-protein
MSHSANKALLPLLAVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDRLGGQAKTILITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQRLKGADYVVTGDVTEFGRKEVGDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNREVIGFGGTASYDSTLNGKVLDLAMREAVNKLVNAVDSGAWKPQNQ
>NC_017549.1|WP_003083569.1|66025_66379_+|DUF4810-domain-containing-protein
MSKTITWTAALLGSMALAGCSGPKTLYQWEGYQAQVHEYFKGESKEAQAQALEADLEKIRAKNGAVPPGYHAQLGLLYSSIGKDDQMVREFETEKALFPESATYMDFLLNNARGGAR
>NC_017549.1|WP_003083573.1|66375_67041_+|DUF799-domain-containing-protein
MKLARLSGLVAGFTLLALLGGCAPTKSVDYSAFKQAKPRSILVLPPLNESPDVKATYSMLSQVTFPLAEAGYYVVPVALADETFRQNGLTSAGDVHQVSPAKLREIYGADAALYVTVSDYGTRYMVISSATIVTASAKLVDLRSGTTLWTGSATASSEEGNGGNNGGLVGMLITAAVKQIINSSVEDAGYPIAGMTSARLLSAGQPGGLLYGPRSPRYGSD
>NC_017549.1|WP_003083575.1|67055_67439_-|helix-turn-helix-transcriptional-regulator
MSFAQNLLRLRQQNALTQRQMAERLGITVSQLRHFETKGGHPSLVVLQTIAGRFAVPLDWLVCERSERQALPEDLRLQFEAIGRLRLDERRAIRALLDDLIRQYMAKRNAAAKPLPAACAEATETSP
>NC_017549.1|WP_003083577.1|67720_69229_-|hypothetical-protein
MSYEERRLDTPLPFSGANVVTHDQTPLAERIVKGAGFDGFEPAFAKRLCAADGRTPVTSYAKALKLVTEEGRALWRAAVDRAQGRRAIPAGALPASDDRMLYWTRLYMTRTLRQWAPSFHLGKAQAQALQWRFERASRGQLDIDLPRRYAADGSRYRRMIISGFDVFTLGTPGTANTGLRNGNPSGATALALDGREFRLADGSLLRIEAYLLPVSYDPFNRGMQEDTLGPWFRPGPRRVDASITISQGGANQFWLEAWNGRFHGSSAGNDGIVYCPADSALPNYVLPLGSVTNPGTAPISLRGSGCNINPPRRWLGYDSASRWRQNLPAQFSKASLPVRQLLAADTWRGIERPPGATSQAAEGFDVTWHTNYDFFPDCANPRTENVPTNGVMNAMPDPSLVLPPNRRICARNGGGGDYLSNESAYRNTVLRDAFRLEIPAGHIHVPVMNNYYTGVPASGGGARNDNAISDARYEAYRSAIVAQTRALLVGVGNALAQGAQAD
>NC_017549.1|WP_003083582.1|69991_70132_+|hypothetical-protein
MKRKMLAASLLLWMFSLTAQADCAVLGPGEDPCAGPVLGPTVCECP
>NC_017549.1|WP_003083584.1|70193_70331_+|hypothetical-protein
MKKVLLAVFLLCGFSLTAQAACPVFGPSEDPCSGPVFGPSTCECP

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Crispr_ID: NC_017549_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017549_2

347143-347256

Orphan

Consensus_repeat	Method
TCATACCTTGCCCTCCAGTTCTTTGGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_017549_2

>merge|NC_017549|2|347143-347256|CRISPRCasFinder
TCATACCTTGCCCTCCAGTTCTTTGGCCACGCTTCTGGATGGAGAGCCTGTTGAACGGGATACGGAGCGGGATACGCTGTGCTGGCTCATACCTTGCCCTCCAGTTCTTTGGCC

>NC_017549|2|2|347143-347256|CRISPRCasFinder
TCATACCTTGCCCTCCAGTTCTTTGGCC	ACGCTTCTGGATGGAGAGCCTGTTGAACGGGATACGGAGCGGGATACGCTGTGCTGGC
TCATACCTTGCCCTCCAGTTCTTTGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_017549.1\|WP_023656933.1\|338813_339512_-\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|226274
NC_017549.1\|WP_003084270.1\|359528_360407_+\|N-carbamoylputrescine-amidase	unknown	unknown	gnl\|CDD\|274553
NC_017549.1\|WP_003084312.1\|342548_343601_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NC_017549.1\|WP_023098425.1\|341350_341962_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239267
NC_017549.1\|WP_003084285.1\|354915_355668_-\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|336781
NC_017549.1\|WP_003112937.1\|355946_357323_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NC_017549.1\|WP_003084314.1\|342066_342570_+\|hypothetical-protein	unknown	unknown	unknown
NC_017549.1\|WP_003084327.1\|338237_338792_+\|hypothetical-protein	unknown	unknown	unknown
NC_017549.1\|WP_003084297.1\|352080_353451_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|180994
NC_017549.1\|WP_003084271.1\|358700_359366_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NC_017549.1\|WP_003084308.1\|343711_346099_+\|penicillin-acylase-family-protein	unknown	unknown	gnl\|CDD\|225241
NC_017549.1\|WP_003084273.1\|357578_358640_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NC_017549.1\|WP_003084339.1\|336780_337473_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NC_017549.1\|WP_003084333.1\|337477_337972_-\|DUF523-domain-containing-protein	unknown	unknown	gnl\|CDD\|224597
NC_017549.1\|WP_003084290.1\|353516_354875_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NC_017549.1\|WP_003084301.1\|349345_350443_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NC_017549.1\|WP_003084299.1\|350861_351965_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NC_017549.1\|WP_003118763.1\|340332_341352_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NC_017549.1\|WP_003084320.1\|339560_340313_+\|hypothetical-protein	unknown	unknown	unknown
NC_017549.1\|WP_003084303.1\|348136_349291_-\|polyamine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183226

Protein	Function_ID	Function_description	E-value
NC_017549.1\|WP_023656933.1\|338813_339512_-\|2OG-Fe(II)-oxygenase	gnl\|CDD\|226274	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones].	1.58503e-77
NC_017549.1\|WP_003084270.1\|359528_360407_+\|N-carbamoylputrescine-amidase	gnl\|CDD\|274553	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase. Members of this family are N-carbamoylputrescine amidase (3.5.1.53). Bacterial genes are designated AguB. The AguAB pathway replaces SpeB for conversion of agmatine to putrescine in two steps rather than one. [Central intermediary metabolism, Polyamine biosynthesis].	0
NC_017549.1\|WP_003084312.1\|342548_343601_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	1.67458e-32
NC_017549.1\|WP_023098425.1\|341350_341962_+\|hypothetical-protein	gnl\|CDD\|239267	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.	0.00328866
NC_017549.1\|WP_003084285.1\|354915_355668_-\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|336781	pfam07722, Peptidase_C26, Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	3.1783e-108
NC_017549.1\|WP_003112937.1\|355946_357323_+\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	1.09186e-161
NC_017549.1\|WP_003084271.1\|358700_359366_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.54898e-08
NC_017549.1\|WP_003084308.1\|343711_346099_+\|penicillin-acylase-family-protein	gnl\|CDD\|225241	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only].	0
NC_017549.1\|WP_003084273.1\|357578_358640_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.13028e-163
NC_017549.1\|WP_003084339.1\|336780_337473_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	3.29364e-79
NC_017549.1\|WP_003084333.1\|337477_337972_-\|DUF523-domain-containing-protein	gnl\|CDD\|224597	COG1683, COG1683, Uncharacterized conserved protein [Function unknown].	1.65548e-66
NC_017549.1\|WP_003084290.1\|353516_354875_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	5.71424e-158
NC_017549.1\|WP_003084301.1\|349345_350443_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NC_017549.1\|WP_003084299.1\|350861_351965_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NC_017549.1\|WP_003118763.1\|340332_341352_-\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	3.48481e-56
NC_017549.1\|WP_003084297.1\|352080_353451_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|180994	PRK07480, PRK07480, putative aminotransferase; Validated.	0
NC_017549.1\|WP_003084303.1\|348136_349291_-\|polyamine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|183226	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG.	0

>NC_017549.1|WP_003084308.1|343711_346099_+|penicillin-acylase-family-protein
MKRTLTVIAVAVAAAAAGGAWYLHAKQPLRNGSLALAHLQAPVDVRYDERGVPHLYAQNQTDLYRALGYVHAQDRLFQMEMLRRLARGELAEVLGPKLVDTDRLFRTLRIRDHAAEYSARQDKQSQPWKVLEAYLDGVNQFQENNPAPLEFDLLGIPRRPFTPEDTLSIAGYMAYSFAAAFRTEPVLTYIRDELGSDYLRIFDLDWHPQGVLTPSGALGAGDWKDLGALARLSQQALEDAGLPQFEGSNAWVVAGSRTASGKPLLAGDPHIRFAAPAVWYEAQLSAPGFELYGHHQALNPFASLGHNRAFGWSLTMFQNDDLDLIAEKVNPDNPNQVWYQGKWVDLQSEEQEIAVKGAAPVKLTLRRSPHGPIVNDALGASSGKTPIAMWWAFLETENPVLDAFYQLNRADTLAKARAAASKIHSPGLNLVWANAAGDIGWWASAALPKRPEGVNPSFILDGSKGEADKSGFYPFADNPQEENPARGYIVSANFQPVPANGRPIPGYYNLADRGQWLDTQLADRGTKWNLDNSRALQLGNRTGYAPRLLAPLLPVLREVVDDAEGKRLVEQLAAWKGDYPVDSTAATLFNQLLFQIAEGALHDELGDAFFDSLIATRAIDSALPRLAGDADSPWWDDRRTERRETRADIVRAAWNASLAHLRGTLGNDPSGWLWGKAHTLTHEHALGQQALLKRLLNVGPFAAPGTHEVPNNLSAKIGPAPWAVTYGPSTRRLVDFADPTHSLGINPVGQSGVPFDGHYDDQAEAYIEGHYLPQHYEENEVKANSKGVLVLEPKR
>NC_017549.1|WP_003084312.1|342548_343601_-|AraC-family-transcriptional-regulator
MQDDPSTSPLTHSATLRRLLYEALDALGLDPTRVYRSVYRRIPLPPPTLGGRLVHDNAPLFWTELAAVTGDADIGLHLGEAMKPRLLDVVGYLLLSARDLEEALRSFVRFQHILSGGFAARLEVEGETARLILDINYLGYASLRQQIECLMLLFLKLLALISDDEFVAERIEFRHRAPPRLGEHRRLFGRLPLFSRPHDALVFSAALLRRPSRNANPDMHGVLTRHAEEQTRELSENRLLNRVRYLIELRLGEGYGLRQCAAELGLGSGALQRALAAGGASFRQVRDEVRRQRASEMLLAGRAIREVAKACGFAELSPFYRAFRRWHAAPPEQYRARLAKREKGYSTSGT
>NC_017549.1|WP_003084314.1|342066_342570_+|hypothetical-protein
MSLRPTLALLALVSLPLMAAQNDPQPSSKELMKEHQAQIQNDLADVDYKRKRIVEANMNLTDQEGEKFWPIYNTYRTESDKLSKETLKLLLDYAQAYNSGNVSDDQASTLIERVDDLQEDRLELRDKYVKRIAKNVSPKRAMRFLQIEIQLDAIATLEIGRQVPLVE
>NC_017549.1|WP_023098425.1|341350_341962_+|hypothetical-protein
MASLAPVFRVNAMTPRRKTLLVSLVGLLWAGGLLAAYWWFEIRYIRPFSEQTTLFSGDSLRLPAELAGPGAIRLVHFWDPACPCNVGNQQHLGELIERFAGKGVEFHVLQKPGSQGRLPDNLVALRPLAGLPGSEQLPASPAVAIWDRDGRLAYFGPYSEGAVCTSSNSFIEPILEALLQGRPVDATHTLAVGCYCPWTPEKG
>NC_017549.1|WP_003118763.1|340332_341352_-|alpha/beta-hydrolase
MCSRAAEYPWVSPVARPRIDCSPEPPMSEAFNPDYLRQHLRPLAAAEADAAVLAYQAYYGLDLRSRHPRLQARLGSMAVDGRRLAVQAWLLPEARGSLLLMHGYYDHMGLYRHVVDWALGMGFSVLACDLPGHGLSEGERASIRDFAEYQAVFKGLLGQAAELDLAAPWHLCGQSTGGAILLDYLLHGGERPELGETILLAPLVRPRAWGWSKLSYRLLSPFVDSIPRRFSENSSDPQFLDFLREHDPLQPRTLPTAWVGALTRWVPRIERAPRRALSPLVVQGESDETVDWRHGLKVLREKFDEPRILLLEEARHHLANESEGLRRRYFDFLSDALGA
>NC_017549.1|WP_003084320.1|339560_340313_+|hypothetical-protein
MRALLAFALLLVGLPALADPYQRLYQAAGWPDQRAHFSDALDAAQKRYQDKLPPALYQTLVDNSNRRFAPAEVDQRALNGLRENLPDSASPLNFFESPLGRKVVAAEVLATRRDQLLQHSNGLPRQTASEPRRALVKRLAQVLPAREAGAEVSLALAGVAADSLSQMLPGLPGLLGGGQTGQLLEGQRQRLVQQIGADLENTLLYVYRDLSDAELTQYVNFAESPAGRSYYQAALAALKAGLAVDQAVAP
>NC_017549.1|WP_023656933.1|338813_339512_-|2OG-Fe(II)-oxygenase
MGRYCRHAADRLSRHRGGTLQWTMHINVNHPLLHRIVDELVDQGWSHQSIFMPERLTTRLAEECRIRAVAGDLTPAAIGRGDGQVIREGIRGDLTQWLEPGESAACDEYLGVMDSLRQALNASLFLGLEDFECHFALYPPGAYYQKHVDRFRDDDARTVSAVLYLNDAWLPEHGGALRLHLPQRQVDIQPTGGSLVVFMSAGTEHEVLPASRDRLSLTGWFRRRNESLLQLS
>NC_017549.1|WP_003084327.1|338237_338792_+|hypothetical-protein
MLPTRSLLPFFLAPALLASAASQAAMEALDNDSLSQVTGQAGISLRLDLRAGAARVAWVDDGGSLSLRNLVIDNGCVKAGDCPDGRGGNIPLGAAQLGLSLPIFGVEQPTLALDVTTGSGGGQQLAISLPDLATINDQLIASGLPAQRIRLRVASDLYIGDNSIGRIELRDITDLRGTIKVWGH
>NC_017549.1|WP_003084333.1|337477_337972_-|DUF523-domain-containing-protein
MQKVLVSRCLLGHLVRYDGGSHGPFDLLSRWHAQGRIVALCPEVAGGLPTPRPPAEIPGGQGGEVLDRLNRVFTVDGEDVSEAFLLGAEAAVELVRRHDIRMAVLKARSPSCGNLENYDGRFNGSRVAGEGVTAAALKRMGVLVFNEDELDRAAVCLAGLDAGG
>NC_017549.1|WP_003084339.1|336780_337473_+|amino-acid-ABC-transporter-permease
MNSLQKLLEWLANLVELLGMAWPFLLQGAMYTVLFAAVSMVLGLILGFSVAVVRVTKVPVVSQIAAVYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLTAPLRR
>NC_017549.1|WP_003084303.1|348136_349291_-|polyamine-ABC-transporter-ATP-binding-protein
MAIASGAYKKALEGNQQPKEVLVKIDRVTKQFDETLAVDTVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIFLDGQDITDLPPYERPINMMFQSYALFPHMSVAQNIAFGLKQDGLPKAEIDERVAEMLKLVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGCIEQIGSPMDIYETPASRLVCEFIGNVNLFDGVLVEDVQDHAVIACPQLENPIYIGHGISTRAEDKRITYALRPEKVMISAQKPDNLEHAGHNWAQGTVYDIAYLGGHSVYYIKLASGMIVQAFMANAERHVARPTWDQSVYISWYDDSGVVLQS
>NC_017549.1|WP_003084301.1|349345_350443_-|polyamine-ABC-transporter-substrate-binding-protein
MQHSIGKTLLVAALATAIAGPVQAEKKSLHIYNWTDYIAPTTLKDFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSKLPNWKNLDPALLKQLEVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQAVLDKLYVSAVLPAKVLRLQTRTWTRIKTGK
>NC_017549.1|WP_003084299.1|350861_351965_-|polyamine-ABC-transporter-substrate-binding-protein
MMKRFGKTLLALTLAGSVAGMAQAADNKVLHVYNWSDYIAPDTLEKFTKETGIKVVYDVYDSNEVLEAKLLAGKSGYDVVVPSNSFLAKQIKAGVYQKLDKSKLPNWKNLNKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMKPEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPSEEVMKKLYTFPDLPAKTQRAMTRSWTKIKSGK
>NC_017549.1|WP_003084297.1|352080_353451_-|aspartate-aminotransferase-family-protein
MNSQITNAKTREWQALSRDHHLPPFTDYKQLNEKGARIITKAEGVYIWDSEGNKILDAMAGLWCVNVGYGREELVQAATRQMRELPFYNLFFQTAHPPVVELAKAIADVAPEGMNHVFFTGSGSEANDTVLRMVRHYWATKGQPQKKVVIGRWNGYHGSTVAGVSLGGMKALHEQGDFPIPGIVHIAQPYWYGEGGDMSPDEFGVWAAEQLEKKILEVGEENVAAFIAEPIQGAGGVIVPPDTYWPKIREILAKYDILFIADEVICGFGRTGEWFGSQYYGNAPDLMPIAKGLTSGYIPMGGVVVRDEIVEVLNQGGEFYHGFTYSGHPVAAAVALENIRILREEKIIEKVKAETAPYLQKRWQELADHPLVGEARGVGMVAALELVKNKKTRERFTDKGVGMLCREHCFRNGLIMRAVGDTMIISPPLVIDPSQIDELITLARKCLDQTAAAVLA
>NC_017549.1|WP_003084290.1|353516_354875_-|glutamine-synthetase
MTTKLDQLTSWLKERKITEVECLISDLTGIARGKISPTNKFIAEKGMRLPESVLLQTVTGDYVEDDIYYDLLDPADIDMVCRPDENAVFLVPWAIEPTAMVIHDTFDKLGNPIELSPRNILKRVLKMYADKGWRPIVAPEMEFYLTKRSDDPDYPLQAPVGRSGRQETGRQSFSIDAANEFDPLFEDMYDWCEAQGLDLDTLIHEEGTAQMEINFRHGDALDLADQILVFKRTMREAALKHNVAATFMAKPMTGEPGSAMHLHQSIVDVKTGKNIFSNADGTMSELFLHHIGGLQKFIPEVLPLFAPNVNSFRRFLPDTSAPVNVEWGEENRTVGLRVPDSSPENRRVENRLAGADANPYLALAASLLCGYIGMVEGIKPSAQVKGRGYERRNLRLPLTIEAALERMENCKPLEQYLGSKFISGYVAVKRAEHENFKRVISSWEREFLLLSV
>NC_017549.1|WP_003084285.1|354915_355668_-|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MSRLPLIGVTACTKQIGLHPYHIAGDKYLRAVVNGAGGLPLIIPALGESIDQAALLDSVDGLLFTGSPSNVEPRHYSGPASEPGTLHDSDRDATTLPLVRAAIDAGIPVLGICRGFQEMNVAFGGSLHQKVHEVGTFMDHREPADQPLEVQYAPRHAMHVQPGGVLAGIGLPSEFQVNSIHGQGVDRLAPGLRVEALAPDGLVEAISVEGAKAFALGVQWHPEWQVLTNPNYLAIFQAFGKACGKRAGQR
>NC_017549.1|WP_003112937.1|355946_357323_+|glutamine-synthetase
MSVPQRAVQLTEPSEFLKEHPEVQFVDLLIADMNGVVRGKRIERNSLNKVFEKGINLPASLFALDITGSTVESTGLGLDIGDADRICYPIPGTLSMEPWQKRPTAQLLMTMHELEGEPFFADPREVLRQVVARFTEMELTIVAAFELEFYLIDQENVNGRPQPPRSPISGKRPQSVQVYSIDDLDEYVECLQDIIDGARAQGIPADAIVAESAPAQFEVNLNHVNDALKACDHAVLLKRLVKNIAYDHEMDTTFMAKPYPGQAGNGLHVHISLLDKHGNNIFTSEDPEQNAALRHAIGGVLETLPASMAFLCPNVNSYRRFGSQFYVPNAPSWGLDNRTVALRVPTGSPDAVRLEHRVAGADANPYLLLAAVLAGVHHGLTNKVEPGAPIEGNSYEQMEPSLPNNLRDALRELDESEIMAKYIDPKYIDIFVACKESELEEFEHSISDLEYNWYLHTV
>NC_017549.1|WP_003084273.1|357578_358640_+|polyamine-ABC-transporter-substrate-binding-protein
MPRLSVLLFLALAPWLAQAEETLRVYNWNDYIDPQVLESFQKDTGIRVEYHTFATAEELDKALRSGEAIDVAVPSHDTLPALLKDNLLRPLDFTQLPNRSHLDRQLLSKLAAVDPDNRHAVPYLWGAVGLAINTPQAEAAYGGPLPNSWSLLFDASQSQRLKSCGISLLDAPDETLAILLNYQGRNLGRTAPSQVRRAAEALHGLRPNLRYVDSERYIADLEGGRLCLAMAWVGDALRAAKAGQPVSFEVPQEGSVLFIDNLVIPASAQHPRQAHRFIDYLMQPKIAAQITAATLYPSGNADAAGFLDPALRQQPGLYPDRDTSRRLFALETPPEKLRPVVDEIWKAFRGASH
>NC_017549.1|WP_003084271.1|358700_359366_+|TetR/AcrR-family-transcriptional-regulator
MQPTSSIRKPRASSQARIAAILDAARGLLADEGIGGLTIYSVAERAEMPPSSVYHFFPSVPALLQGLTGEVHAAFRACLEQPVDHAGLRCWRDLSRIVEERMLAVYARDAAARQLILASHGLAEVTQADRQHDVQLGQAMRALFERHFLLPPLPTDIEIFSLAMELGDRVYALSVQRHGIIDARLAEEGMRVFDAYLGLYLPPILEKRSEPLTGFISDLNR
>NC_017549.1|WP_003084270.1|359528_360407_+|N-carbamoylputrescine-amidase
MTRNVTVAATQMACSWDRPANIARAEKLVRQAAARGAQIILIQELFETPYFCQKPNPDYLQLATTVEENAAIAHFQALARELQVVLPISFFERAGRARFNSIAVIDADGGNLGVYRKSHIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQWFPESARSMALLGAELLFYPTAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGREEQDGYDITFYGSSFIADPFGEKVEELNHTEEGILVHTFDLDALERTRSAWGVFRDRRPNLYGPLKTLDGSLES

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Crispr_ID: NC_017549_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_017549_3

4925363-4925590

Orphan

Consensus_repeat	Method
CCCTCCCCGTGTAGGGCGAATAACCGCCACGCGGTTATCCGCCG	PILER-CR

2 spacers

The CRISPR arrays of NC_017549_3

>merge|NC_017549|3|4925363-4925590|PILER-CR
CCCGGCGTAGGACGAATAACCGCCAGCTCGGCAGAAGCTAGGCGAATAACGCCTGGAGGCGTTATTCGCCCTACCGCTTGTCCCCTCCCCGTGTAGGGCGAATAACCGCTACGCGGTTATCCGCCGCCTGGGCAGGCGTTTCGGCGGATAACGCCTGGGGCGTTATTCGCCCTACCGCTTGCTCCTTCCCCGTGTAGGGCGAATAACCGCCACGCGGTTATCCGCCGC

>NC_017549|3|1|4925363-4925590|PILER-CR
CCCGGCGTAGGACGAATAACCGCCAGCTCGGCAGAAGCTAGGCGA	ATAACGCCTGGAGGCGTTATTCGCCCTACCGCTTGTCCCCTCCCCGTGTAGGGCGAA
TAACCGCTACGCGGTTATCCGCCGCCTGGGCAGGCGTTTCGGCGG	ATAACGCCTGGGGCGTTATTCGCCCTACCGCTTGCTCCTTCCCCGTGTAGGGCGAAT
AACCGCCACGCGGTTATCCGCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_017549.1\|WP_003119579.1\|4929932_4930757_-\|aliphatic-sulfonates-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183055
NC_017549.1\|WP_003091880.1\|4922412_4923192_-\|class-II-aldolase/adducin-family-protein	unknown	unknown	gnl\|CDD\|235916
NC_017549.1\|WP_003091876.1\|4921127_4921421_-\|hypothetical-protein	unknown	unknown	unknown
NC_017549.1\|WP_003091896.1\|4927733_4928294_+\|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl\|CDD\|237149
NC_017549.1\|WP_003091885.1\|4923993_4924383_-\|CidA/LrgA-family-protein	unknown	unknown	gnl\|CDD\|224298
NC_017549.1\|WP_003091893.1\|4926343_4926901_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225765
NC_017549.1\|WP_003091898.1\|4928795_4929107_+\|DUF1244-domain-containing-protein	unknown	unknown	gnl\|CDD\|226023
NC_017549.1\|WP_003091883.1\|4923320_4924007_-\|LrgB-family-protein	unknown	unknown	gnl\|CDD\|224265
NC_017549.1\|WP_003091895.1\|4927011_4927716_+\|dihydromonapterin-reductase	unknown	unknown	gnl\|CDD\|180586
NC_017549.1\|WP_003119583.1\|4916574_4917318_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378964
NC_017549.1\|WP_003091874.1\|4919213_4919984_-\|crotonase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|236205
NC_017549.1\|WP_003091899.1\|4929158_4929497_+\|HopJ-type-III-effector-protein	unknown	unknown	gnl\|CDD\|378082
NC_017549.1\|WP_003091865.1\|4917408_4918815_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274522
NC_017549.1\|WP_003091900.1\|4929676_4929892_-\|molybdopterin-binding-protein	unknown	unknown	gnl\|CDD\|226113
NC_017549.1\|WP_003091897.1\|4928295_4928667_+\|dihydroneopterin-triphosphate-2'-epimerase	unknown	unknown	gnl\|CDD\|183053
NC_017549.1\|WP_003091890.1\|4925611_4926064_-\|flavodoxin	unknown	unknown	gnl\|CDD\|168208
NC_017549.1\|WP_003091873.1\|4918849_4919194_+\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|225981
NC_017549.1\|WP_003091877.1\|4921519_4922416_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NC_017549.1\|WP_003091909.1\|4930753_4931542_-\|aliphatic-sulfonate-ABC-transporter-permease-SsuC	unknown	unknown	gnl\|CDD\|183100
NC_017549.1\|WP_003091875.1\|4920100_4921012_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187611

Protein	Function_ID	Function_description	E-value
NC_017549.1\|WP_003119579.1\|4929932_4930757_-\|aliphatic-sulfonates-ABC-transporter-ATP-binding-protein	gnl\|CDD\|183055	PRK11247, ssuB, aliphatic sulfonates transport ATP-binding subunit; Provisional.	7.75429e-166
NC_017549.1\|WP_003091880.1\|4922412_4923192_-\|class-II-aldolase/adducin-family-protein	gnl\|CDD\|235916	PRK07044, PRK07044, aldolase II superfamily protein; Provisional.	4.352e-160
NC_017549.1\|WP_003091896.1\|4927733_4928294_+\|GTP-cyclohydrolase-I-FolE	gnl\|CDD\|237149	PRK12606, PRK12606, GTP cyclohydrolase I; Reviewed.	1.62465e-124
NC_017549.1\|WP_003091885.1\|4923993_4924383_-\|CidA/LrgA-family-protein	gnl\|CDD\|224298	COG1380, COG1380, Putative effector of murein hydrolase LrgA [General function prediction only].	3.74785e-31
NC_017549.1\|WP_003091893.1\|4926343_4926901_+\|hypothetical-protein	gnl\|CDD\|225765	COG3224, COG3224, Uncharacterized protein conserved in bacteria [Function unknown].	1.83664e-84
NC_017549.1\|WP_003091898.1\|4928795_4929107_+\|DUF1244-domain-containing-protein	gnl\|CDD\|226023	COG3492, COG3492, Uncharacterized protein conserved in bacteria [Function unknown].	2.30637e-55
NC_017549.1\|WP_003091883.1\|4923320_4924007_-\|LrgB-family-protein	gnl\|CDD\|224265	COG1346, LrgB, Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane].	8.17593e-94
NC_017549.1\|WP_003091895.1\|4927011_4927716_+\|dihydromonapterin-reductase	gnl\|CDD\|180586	PRK06483, PRK06483, dihydromonapterin reductase; Provisional.	3.29755e-150
NC_017549.1\|WP_003119583.1\|4916574_4917318_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	3.89695e-17
NC_017549.1\|WP_003091874.1\|4919213_4919984_-\|crotonase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|236205	PRK08259, PRK08259, crotonase/enoyl-CoA hydratase family protein.	2.19023e-155
NC_017549.1\|WP_003091899.1\|4929158_4929497_+\|HopJ-type-III-effector-protein	gnl\|CDD\|378082	pfam08888, HopJ, HopJ type III effector protein. Pathovars of Pseudomonas syringae interact with their plant hosts via the action of Hrp outer protein (Hop) effector proteins, injected into plant cells by the type III secretion system. The proteins in this family are called HopJ after the original member HopPmaJ.	4.35687e-54
NC_017549.1\|WP_003091865.1\|4917408_4918815_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|274522	TIGR03329, Phn_aa_oxid, putative aminophosphonate oxidoreductase. This clade of sequences are members of the pfam01266 family of FAD-dependent oxidoreductases. Characterized proteins within this family include glycerol-3-phosphate dehydrogenase (1.1.99.5), sarcosine oxidase beta subunit (1.5.3.1) and a number of deaminating amino acid oxidases (1.4.-.-). These genes have been consistently observed in a genomic context including genes for the import and catabolism of 2-aminoethylphosphonate (AEP). If the substrate of this oxidoreductase is AEP itself, then it is probably acting in the manner of a deaminating oxidase, resulting in the same product (phosphonoacetaldehyde) as the transaminase PhnW (TIGR02326), but releasing ammonia instead of coupling to pyruvate:alanine. Alternatively, it is reasonable to suppose that the various ABC cassette transporters which are also associated with these loci allow the import of phosphonates closely related to AEP which may not be substrates for PhnW.	2.77831e-57
NC_017549.1\|WP_003091900.1\|4929676_4929892_-\|molybdopterin-binding-protein	gnl\|CDD\|226113	COG3585, MopI, Molybdopterin-binding protein [Coenzyme metabolism].	5.68345e-18
NC_017549.1\|WP_003091897.1\|4928295_4928667_+\|dihydroneopterin-triphosphate-2'-epimerase	gnl\|CDD\|183053	PRK11245, folX, dihydroneopterin triphosphate 2'-epimerase.	3.45838e-76
NC_017549.1\|WP_003091890.1\|4925611_4926064_-\|flavodoxin	gnl\|CDD\|168208	PRK05723, PRK05723, flavodoxin; Provisional.	7.28361e-99
NC_017549.1\|WP_003091873.1\|4918849_4919194_+\|cupin-domain-containing-protein	gnl\|CDD\|225981	COG3450, COG3450, Predicted enzyme of the cupin superfamily [General function prediction only].	8.31479e-48
NC_017549.1\|WP_003091877.1\|4921519_4922416_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.40759e-20
NC_017549.1\|WP_003091909.1\|4930753_4931542_-\|aliphatic-sulfonate-ABC-transporter-permease-SsuC	gnl\|CDD\|183100	PRK11365, ssuC, aliphatic sulfonate ABC transporter permease SsuC.	1.22104e-135
NC_017549.1\|WP_003091875.1\|4920100_4921012_-\|SDR-family-oxidoreductase	gnl\|CDD\|187611	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs. Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	9.42558e-147

>NC_017549.1|WP_003091885.1|4923993_4924383_-|CidA/LrgA-family-protein
MLPPLVRRLSRLAAELAVLIAFWWAGGWLAKAIGLPLPGGVVGLAALLLLFASGLLRPAWLQAGAGLLLAEMLLFFIPALMSLLDYGALLRSEGWRILLVIMLSTLLVMLVTAVSVEWMCRWRARHESR
>NC_017549.1|WP_003091883.1|4923320_4924007_-|LrgB-family-protein
MSLDKQALFWLAATVGGYLLSRQLYRRVKWYWLSPIVFVPVLLYALAIPTHTRYADYARDTNWLVALLGPATVAFAIPIWQQRELLMRHWPALLAGMFAGTAVAIGSSWALAQALALDGQVTLSLLPRSITTPFAMEMSHDLGGVPELTAAFVMITGVFGAVIGGTLLRVLRLRTPLARGALFGVGAHGAGTSRAYEFGDEEGSAAGLLMVLTGLFNLLVAPLVAHCL
>NC_017549.1|WP_003091880.1|4922412_4923192_-|class-II-aldolase/adducin-family-protein
MTAVHSLPADVQAQVSAAEWQTRVDLAACYRLVALHGWDDLIFTHISAKVPGTEDFLINPFGLMFHEITASSLVKVDASGKKLMDSPYEINPAGYTIHSAVHEVRHDVECVLHTHTAAGIAVSCQKQGLLPLSQQSLFVLSSLSYHAYEGVALNHEEKARLQADLGTSNFLILPNHGLLTCGGSIADTFLMMFTLQRACEVQVMAQSGGAELIHIPGQILAGARDMIAGVMRSKTGMGGQLAWPALLRKLDQQNPGYRQ
>NC_017549.1|WP_003091877.1|4921519_4922416_-|alpha/beta-hydrolase
MTAALPGIPLEAWRRRGRTLDFKGFPIRYWEAGQGRPLLLIHGFPSAAWDWHYLWEPLAQRYRVLVCDLLGFGDSAKPRAHRYSLLEQADLQQALLGCLGIDEPLHVLAHDYGDSVAQELLARHHEGRLRLASCVFLNGGLFPETHRPVLSQKLLLSPLGGLFGRLFDRRALARNFAKVFGPRSQPGETELDAFWSLIESNQGQRVMHRLIRYIVDRREQRERWVAALQHGGVPLRVIDGAVDPISGAHMVERYRKLVADADCVLLDGIGHYPQIEAPAAVLEHYLAFRARLDDSEFS
>NC_017549.1|WP_003091876.1|4921127_4921421_-|hypothetical-protein
MHDPVSPLRVFDEGSWLFRQMVQAQPFIRQSGMVLAELGLLLALGLGYLCWQEGSRWYAVGAGLALLGSLLLMVVRHNYDWWLFKLGPRGRLYIPFD
>NC_017549.1|WP_003091875.1|4920100_4921012_-|SDR-family-oxidoreductase
MSDALRLDDQVVIVTGAGGGLGRAHALLFAKHGARVVVNDLGGSTHGEGASASAADKVVAEIRAAGGTAVANHDSVTDGDRIVENALDAFGRVDVVVNNAGILRDKTFHKMEDADWDLVYQVHVEGAYKVTRAAWPHLREQAYGRVVFTSSTSGIYGNFGQSNYGMAKLGLYGLTRTLALEGRKNNILVNAIAPTGGTRMTEGLIPPQVFEQLKPELVSPLVVYLGSSACEDTSGLYEVGGGWIGKVRWERSLGFGFDPKAGFDAEDVAAHWQQICDFENAAHPADNVEALREMMANLQRHAL
>NC_017549.1|WP_003091874.1|4919213_4919984_-|crotonase/enoyl-CoA-hydratase-family-protein
MSVIVERNGPVTTLVIARPERRNAVDRPTAQALADALREFEADDTARVAVLTGSGGNFCAGADLAAVAEDGERRNRLEAEGDGPMGPSRMQLGKPLIAAIEGYAVAGGLELALLADLRVMAEDAICGVFCRRFGVPLIDGGSVRLPRIVGQGRALDLILTGRPVKADEALQIGLANRVVPSGSARAEAEELAAELAAFPQTCMLADRASVYAQWELSFDVALANEFQGGLAVIESGETLEGAQRFKDGEGRHGRFE
>NC_017549.1|WP_003091873.1|4918849_4919194_+|cupin-domain-containing-protein
MALTLLKNTAGADLGAASPVAVPLGEPVAQTRAYAVERTDQVETGIWECTPGRWRRQIVEQEFCHFLQGRCTFTPDGGETIRIEAGDALLLPENSLGVWDVQETVRKSYVIIHR
>NC_017549.1|WP_003091865.1|4917408_4918815_+|FAD-dependent-oxidoreductase
MSAWRHLSLWMNQLDDPLEARPSLEESLEVDVAIVGAGYTGLWTAYYLKRRAPQLRVAIVEAETAGFGASGRNGGWLMGNLLGEDGLLAGLPPERRRAGYDLLHGIPDEVARVLQEEGIDCDYRKGGVLYCAARYPEQERRLRAYLHDLYAEGLDESDYRWLTPQELDQQLRIPGSYGAIHSPHCATIQPARLARGLARAVERLGVRLFEKSRVLHWQRGLLRTERGELRAEWIVPAVEGYAASLPPLGHYQLPVQSLLVATEPLPSSVWAEIGLERGQAFSEFSRQVTYGQRTADDRLAFGARGGYRFGGKLRNDFSLDDEEVGLRRYLFGELFPLLKDARISHTWGGNLGMARRFRPHMLLDRASGIALSGGYGGEGVGASNLGGRTLAALILGEDSELLRQPWVLGERPLDSLARWEPEPCRWLGYNAIIRSFVHEDRVLADPHSAPWRRSLAQTLAAGMESLMR
>NC_017549.1|WP_003119583.1|4916574_4917318_+|helix-turn-helix-domain-containing-protein
MRYHLSWKHRDIDAVMALYHPEVEYNDFFQNRRMRLADLREYVEATMPKGPDESLEHTDRIRFDGDTAFIQYRLRVTLSGRLASFRASEAITVRDGLIWRINEYASLVHESGGGAQAGGDGRPPASRLGLSAKQLSLLARDLEHYFQQAQPYLDPDLDLTQVANATGYTRNQISYLLNQVLGLSFYQYVNQTRLQHLLGQLSGELPGRVDELAFAAGFNSLSAFYRCFRQHTGQSPREYLKRLSSRR
>NC_017549.1|WP_003091890.1|4925611_4926064_-|flavodoxin
MKVAILSGSVYGTAEEVARHAQKLLSAAGFEASHLPRASLDELKAFAPEAFLVVTSTTGMGELPDNLQPLYYAIRDQLPAWHGLPGGVIGLGDSSYGDTFCGGGEQVRELFGELGVREVLPMLRLDASETVTPETDAEPWLAEFAAALKG
>NC_017549.1|WP_003091893.1|4926343_4926901_+|hypothetical-protein
MSTAPVTLLVARRVAAGRYRDFLAWQREGEALAADFPGYLGSGALAPPAGGDEFQMIFRFADDATLAAWVHSASRQAWLERGQGLFDEPREHRAHGLAAWFDDNRKPPRWKQSVAIWLAFFPVSLAFNLGAGPYLGELSLAARVLLSTLVLTPLMTYWFIPLSSRLLAPWLHRRPQRAASLPEAH
>NC_017549.1|WP_003091895.1|4927011_4927716_+|dihydromonapterin-reductase
MATAPILITGASQRVGLHCARRLLADGESVIVSYRSERPALDELRQAGALTLHADFASEAGIFAFIGALRQHTDSLRAIVHNASDWVAETPGHEAEAFQQLFSVHMLAPYLINLHCAELLERSQPADIVHLTDDVARKGSARRIAYCASKAGLDNLTLSFAARFAPRIKVNAISPALVMFNDGDDAEYRARTLAKSALGIEPGPEVIYQSLRYLLDNPYVTGTTLTVNGGRHVK
>NC_017549.1|WP_003091896.1|4927733_4928294_+|GTP-cyclohydrolase-I-FolE
MNPALSQHYREILVGLGEDPQREGLLDTPKRAAKAMQYLCHGYGQTLEEIVNGALFASDNDEMVIVRDIELYSLCEHHLLPFIGKAHVAYIPTGKVLGLSKVARIVDMFARRLQIQENLTRQIAEAVRQVTSAAGVAVVIEAQHMCMMMRGVEKQNSQMFTSVMLGAFRDSNTTRQEFLQLIGRSK
>NC_017549.1|WP_003091897.1|4928295_4928667_+|dihydroneopterin-triphosphate-2'-epimerase
MPRLEPGMARIRVKDLRLRTFIGIKEEEILNKQDVLINLTILYPAADAVEVNDIEHALNYRTITKAIIRHVEENRFALLERMTQEILDLVMENPAVRYAEVEVDKPHALRFAESVSITLAGHR
>NC_017549.1|WP_003091898.1|4928795_4929107_+|DUF1244-domain-containing-protein
MTAANLTEQQRLELEAAAFRTLVHHLQTRKDVQNIDLMNLAGFCRNCLSKWYKAAADDLGVEVSNDQAREEIYGMPYAEWKAKYQKEASPEQQAAFAKSQGNA
>NC_017549.1|WP_003091899.1|4929158_4929497_+|HopJ-type-III-effector-protein
MTLTDFRARLRSEHHLFTDTLAFIAEHYSYTPSAFDNGSVSNPAGQNEGSCKTLGFAILEGLSLEETLLAFGEHYRAVRDNPEGDDHANIRALQQTGLAGVHFERQPLSRRG
>NC_017549.1|WP_003091900.1|4929676_4929892_-|molybdopterin-binding-protein
MTIKAINVRNQFKGTVKEIIEGPVLSEIDVQTAAGIVTSVITTRSVKELELAIGSEVIAFVKSTEVSIAKL
>NC_017549.1|WP_003119579.1|4929932_4930757_-|aliphatic-sulfonates-ABC-transporter-ATP-binding-protein
MNAHNAALGGTPQRLKRGIPLALRGVARRFGEREVLKDIDLLVPAGQFVAIVGRSGCGKSTLLRLLAGLDQPSRGELLAGSAALAEAREDTRLMFQDSRLLPWKRVIDNVGLGLRGDWRAKALQALRAVGLAERANEWPAALSGGQKQRVALARALIHEPRLLLLDEPLGALDALTRIEMQHLIEGLWREHGFTVLLVTHDVSEAVAVADRVILIEDGEIGLDLPVELPRPRSRGSARLAALEAEVLNRVLAQPELPPQPEPVSPLPTQLRWAL
>NC_017549.1|WP_003091909.1|4930753_4931542_-|aliphatic-sulfonate-ABC-transporter-permease-SsuC
MSISKRLAERLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISGWRAAIGFLIGGTIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGALPSILVGVRFALGFMWLTLIVAETISASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADLAARGLERVWLRWHPAYQVKGGGA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_017549_3	3.1\|4925408\|57\|NC_017549\|PILER-CR	4925408-4925464	57	MK511017	Pseudomonas phage CF23, partial genome	26-82	6	0.895

1. spacer 3.1|4925408|57|NC_017549|PILER-CR matches to MK511017 (Pseudomonas phage CF23, partial genome) position: , mismatch: 6, identity: 0.895

gctcggcagaagcta-ggcgaataacgcctggaggcgttattcgccctaccgcttgtc	CRISPR spacer
-cacagcagaggctacggcggataacgcctgggggcgttattcgccctaccgcttgtc	Protospacer
 * *.*****.**** ****.***********.*************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1697597 : 1760495

Pseudomonas_phage(71.43%)

integrase,holin,portal,tail,capsid,protease,terminase,lysis,head

attL 1700493:1700520|attR 1740564:1740591

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003085672.1\|1697597_1698584_+\|integrase	tyrosine-type recombinase/integrase	Q56VN7	Pseudomonas_phage	2.2e-90	49.8
WP_003085674.1\|1698569_1700279_-	TIGR04141 family sporadically distributed protein	NA	NA	NA	NA
1700493:1700520	attL	NA	NA	NA	NA
WP_014603615.1\|1701005_1701449_-	SocA family protein	I6R0L8	Salmonella_phage	4.3e-46	56.8
WP_072018016.1\|1701515_1702694_-\|integrase	site-specific integrase	A0A1W6JTA0	Pseudomonas_phage	2.1e-209	95.8
WP_023103993.1\|1702836_1703166_-	hypothetical protein	A0A1W6JT94	Pseudomonas_phage	1.8e-57	99.1
WP_003085679.1\|1703158_1703878_-	hypothetical protein	A0A1W6JTE0	Pseudomonas_phage	3.4e-125	94.1
WP_003085682.1\|1703874_1704066_-	hypothetical protein	A0A0A0YQ21	Pseudomonas_phage	9.2e-30	100.0
WP_003085685.1\|1704184_1705000_-	hypothetical protein	A0A0A0YUE9	Pseudomonas_phage	5.7e-60	87.7
WP_003085687.1\|1704996_1705332_-	hypothetical protein	A0A1W6JTA6	Pseudomonas_phage	1.2e-53	99.1
WP_003085689.1\|1705334_1705565_-	Arc family DNA-binding protein	A0A1W6JTB4	Pseudomonas_phage	2.9e-30	89.5
WP_003085692.1\|1705606_1706443_-	prohibitin family protein	A0A0A0YRT7	Pseudomonas_phage	1.0e-128	100.0
WP_003085694.1\|1706439_1706694_-	hypothetical protein	A0A0A0YUF2	Pseudomonas_phage	3.8e-39	100.0
WP_014603617.1\|1706793_1707027_-	hypothetical protein	A0A0A0YQ28	Pseudomonas_phage	1.5e-37	98.7
WP_003085698.1\|1707029_1707416_-	helix-turn-helix transcriptional regulator	A0A1W6JTA9	Pseudomonas_phage	8.3e-54	95.8
WP_107236447.1\|1707606_1707684_+	hypothetical protein	NA	NA	NA	NA
WP_012613694.1\|1707736_1708096_-	hypothetical protein	NA	NA	NA	NA
WP_019396631.1\|1708092_1708386_-	hypothetical protein	NA	NA	NA	NA
WP_014603618.1\|1708498_1709290_-	helix-turn-helix transcriptional regulator	A0A2K8HKD5	Pseudomonas_phage	2.5e-76	81.2
WP_023465045.1\|1709378_1709717_+	hypothetical protein	A0A1W6JTD1	Pseudomonas_phage	7.9e-08	49.4
WP_003085704.1\|1709713_1710106_+	hypothetical protein	NA	NA	NA	NA
WP_023103992.1\|1710411_1710762_+	hypothetical protein	NA	NA	NA	NA
WP_003085707.1\|1710836_1711037_+	hypothetical protein	A0A1W6JTC3	Pseudomonas_phage	2.5e-17	76.9
WP_003085709.1\|1711033_1711342_+	hypothetical protein	A0A0A0YWH5	Pseudomonas_phage	1.1e-45	93.1
WP_023103745.1\|1711338_1711617_+	hypothetical protein	A0A0A0YR77	Pseudomonas_phage	7.1e-31	79.3
WP_003085714.1\|1711609_1711843_+	hypothetical protein	A0A0A0YRU7	Pseudomonas_phage	6.4e-33	96.1
WP_023086959.1\|1712462_1713302_+	helix-turn-helix domain-containing protein	A0A1W6JTD5	Pseudomonas_phage	7.9e-150	96.1
WP_003085722.1\|1713477_1714098_+	ATP-binding protein	A0A1W6JTD8	Pseudomonas_phage	2.9e-109	99.5
WP_003085724.1\|1714094_1715492_+	AAA family ATPase	A0A1W6JTB3	Pseudomonas_phage	1.5e-265	99.8
WP_003085726.1\|1715488_1715773_+	hypothetical protein	A0A1W6JTC1	Pseudomonas_phage	4.5e-41	96.6
WP_003085729.1\|1715769_1716327_+	hypothetical protein	A0A0A0YRV6	Pseudomonas_phage	1.2e-74	97.1
WP_003085732.1\|1716855_1717386_+	Rha family transcriptional regulator	A0A2D1GLJ3	Escherichia_phage	1.2e-26	37.3
WP_004353177.1\|1717471_1717804_+\|holin	phage holin, lambda family	A0A1W6JTC7	Pseudomonas_phage	1.9e-54	96.4
WP_003085737.1\|1717800_1718412_+	glycoside hydrolase family 19 protein	A0A1B0Z086	Pseudomonas_phage	4.0e-103	91.1
WP_003085739.1\|1718425_1718656_+	hypothetical protein	A0A2C9CY14	Yersinia_phage	4.1e-16	60.6
WP_003085741.1\|1718662_1719136_+\|lysis	lysis protein	A0A1B0Z001	Pseudomonas_phage	3.3e-68	89.1
WP_023103989.1\|1719135_1719465_+	HNH endonuclease	B5WZZ4	Pseudomonas_phage	5.1e-28	53.7
WP_003085748.1\|1719879_1720371_+\|terminase	terminase small subunit	S4TNN3	Salmonella_phage	3.2e-10	37.0
WP_022580266.1\|1720374_1722054_+\|terminase	terminase large subunit	A0A2H4JDK9	uncultured_Caudovirales_phage	2.8e-194	65.8
WP_023103987.1\|1722056_1723274_+\|portal	phage portal protein	A0A2H4JFN7	uncultured_Caudovirales_phage	1.5e-170	73.2
WP_003085756.1\|1723257_1723902_+\|head,protease	HK97 family phage prohead protease	A0A2H4JA51	uncultured_Caudovirales_phage	3.5e-89	75.7
WP_003085757.1\|1723898_1725113_+\|capsid	phage major capsid protein	A0A2H4J8D1	uncultured_Caudovirales_phage	4.1e-155	67.3
WP_003085760.1\|1725164_1725368_+	hypothetical protein	A0A2H4JG33	uncultured_Caudovirales_phage	1.8e-07	50.0
WP_003085762.1\|1725367_1725691_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4J8C5	uncultured_Caudovirales_phage	9.1e-30	65.6
WP_022580265.1\|1725690_1726017_+\|head,tail	head-tail adaptor protein	A0A2D1GNG1	Pseudomonas_phage	2.8e-18	57.3
WP_014603624.1\|1726058_1726217_+	hypothetical protein	NA	NA	NA	NA
WP_023103986.1\|1726220_1726793_+	hypothetical protein	A0A2D1GNN2	Pseudomonas_phage	1.3e-39	48.9
WP_003085767.1\|1726785_1727172_+	DUF3168 domain-containing protein	A0A2D1GNT4	Pseudomonas_phage	4.9e-38	63.8
WP_003085769.1\|1727204_1727705_+	hypothetical protein	A0A2D1GNF2	Pseudomonas_phage	2.8e-70	79.3
WP_003085771.1\|1727749_1728094_+	hypothetical protein	NA	NA	NA	NA
WP_003085773.1\|1728090_1728318_+	hypothetical protein	NA	NA	NA	NA
WP_003085775.1\|1728358_1731616_+\|tail	phage tail tape measure protein	A0A2D1GNQ1	Pseudomonas_phage	4.0e-80	35.9
WP_003085778.1\|1731615_1731954_+\|tail	phage tail protein	A0A1B0VMG7	Pseudomonas_phage	1.1e-28	49.1
WP_014603625.1\|1731950_1732697_+\|tail	phage minor tail protein L	A0A0S2SY57	Pseudomonas_phage	5.1e-116	77.5
WP_003085782.1\|1732699_1733458_+	C40 family peptidase	A0A2H4J1J7	uncultured_Caudovirales_phage	2.1e-117	75.7
WP_015649319.1\|1733504_1733747_+	hypothetical protein	NA	NA	NA	NA
WP_015649318.1\|1733743_1734160_+	hypothetical protein	NA	NA	NA	NA
WP_022580264.1\|1734208_1734781_+\|tail	tail assembly protein	A0A2H4J1H0	uncultured_Caudovirales_phage	1.3e-58	63.6
WP_014603627.1\|1734837_1738290_+	DUF1983 domain-containing protein	A0A0S2SYC5	Pseudomonas_phage	0.0e+00	83.0
WP_031632464.1\|1739649_1740375_+	hypothetical protein	A0A2H4J1J6	uncultured_Caudovirales_phage	1.2e-56	58.9
WP_003085791.1\|1740979_1741858_-	hypothetical protein	NA	NA	NA	NA
1740564:1740591	attR	NA	NA	NA	NA
WP_003085795.1\|1741945_1742629_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_003085798.1\|1742737_1743679_+	alpha/beta hydrolase	A0A1D8EUH4	Mycobacterium_phage	4.4e-08	33.3
WP_003085801.1\|1743812_1744646_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_003085802.1\|1744770_1745790_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_003085806.1\|1745891_1746533_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_003085808.1\|1746638_1747352_+	OmpA family protein	NA	NA	NA	NA
WP_003085811.1\|1747421_1748336_-	acyltransferase	NA	NA	NA	NA
WP_003085813.1\|1748462_1750577_-	phosphate acetyltransferase	NA	NA	NA	NA
WP_003085814.1\|1750639_1751824_-	acetate kinase	NA	NA	NA	NA
WP_003109430.1\|1751823_1752162_-	DUF3565 domain-containing protein	NA	NA	NA	NA
WP_003085816.1\|1752130_1752616_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_003085818.1\|1752821_1753304_+	glutathione peroxidase	NA	NA	NA	NA
WP_003085819.1\|1753456_1754047_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003085824.1\|1754087_1755200_+	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_003085826.1\|1755390_1756350_+	DegV family protein	NA	NA	NA	NA
WP_003085828.1\|1756353_1757574_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_009315289.1\|1757661_1758285_-	phospholipase C accessory protein PlcR	NA	NA	NA	NA
WP_003085833.1\|1758302_1760495_-\|holin	phospholipase C, phosphocholine-specific	NA	NA	NA	NA

DBSCAN-SWA_2

1880812 : 1905551

Escherichia_phage(55.56%)

integrase,tRNA,transposase

attL 1892285:1892344|attR 1905555:1906375

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003086089.1\|1880812_1882528_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_003086091.1\|1882635_1883043_+	PaaI family thioesterase	NA	NA	NA	NA
WP_001067855.1\|1883806_1884511_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001300294.1\|1885900_1886569_-	EAL domain-containing protein	NA	NA	NA	NA
WP_000993386.1\|1886604_1886841_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001277456.1\|1886837_1887200_-	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000105636.1\|1887217_1888912_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
WP_001340589.1\|1888963_1889386_-	organomercurial transporter MerC	NA	NA	NA	NA
WP_000732292.1\|1889421_1889697_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001294663.1\|1889710_1890061_-	mercuric transport protein MerT	NA	NA	NA	NA
WP_000429836.1\|1890132_1890567_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_000027057.1\|1890848_1891709_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
1892285:1892344	attL	NA	NA	NA	NA
WP_001067855.1\|1892347_1893052_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_012196455.1\|1893547_1893778_-	hypothetical protein	NA	NA	NA	NA
WP_000845048.1\|1893984_1894998_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_003159548.1\|1895150_1895891_+	subclass B1 metallo-beta-lactamase IMP-1	NA	NA	NA	NA
WP_003159545.1\|1896044_1896596_+	aminoglycoside 6'-N-acetyltransferase AAC(6')-Iae	NA	NA	NA	NA
WP_001206316.1\|1896670_1897462_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000679427.1\|1897625_1897973_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|1897966_1898806_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_000376623.1\|1898933_1899434_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000983249.1\|1899609_1900395_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	3.3e-33	35.0
WP_001324342.1\|1900381_1901905_-\|transposase	IS21-like element IS1326 family transposase	A0A2L1IVA1	Escherichia_phage	1.2e-15	24.2
WP_000287615.1\|1902027_1903572_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.0e-38	34.6
WP_000344784.1\|1903622_1904483_-	TniB family NTP-binding protein	NA	NA	NA	NA
WP_001067855.1\|1904846_1905551_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
1905555:1906375	attR	NA	NA	NA	NA

DBSCAN-SWA_3

3078017 : 3128824

Pseudomonas_phage(87.1%)

integrase,head,terminase

attL 3078565:3078580|attR 3114210:3114225

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003111315.1\|3078017_3079607_-	ABC-F family ATPase	A0A2K9L0W2	Tupanvirus	5.9e-61	28.3
3078565:3078580	attL	NA	NA	NA	NA
WP_034033105.1\|3079637_3080855_-\|integrase	site-specific integrase	A0A0U4B0G7	Pseudomonas_phage	6.6e-230	99.0
WP_014603736.1\|3081104_3081485_-	hypothetical protein	A0A0S2SY48	Pseudomonas_phage	1.0e-24	49.0
WP_123822976.1\|3081481_3081685_-	hypothetical protein	D4FUM8	Pseudomonas_phage	6.5e-34	100.0
WP_049821773.1\|3081685_3081988_-	hypothetical protein	A0A0A1IVN6	Pseudomonas_phage	3.5e-23	61.0
WP_014603738.1\|3081990_3082476_-	dual specificity protein phosphatase family protein	A0A127KNP4	Pseudomonas_phage	1.3e-88	98.8
WP_014603739.1\|3082460_3082607_-	hypothetical protein	Q9MC62	Pseudomonas_phage	6.8e-17	91.7
WP_041025732.1\|3082760_3083084_-	hypothetical protein	A0A1B0Z2L6	Pseudomonas_phage	4.8e-47	87.9
WP_014603741.1\|3083128_3083332_-	hypothetical protein	A0A125RNQ4	Pseudomonas_phage	8.0e-32	97.0
WP_014603742.1\|3083328_3083970_-	hypothetical protein	A0A2H5BQE7	Pseudomonas_phage	5.5e-18	100.0
WP_003140732.1\|3085726_3085933_-	hypothetical protein	H2BDF2	Pseudomonas_virus	1.3e-26	84.1
WP_003097969.1\|3086145_3086484_-	hypothetical protein	A0A125RNR1	Pseudomonas_phage	2.7e-56	100.0
WP_003097967.1\|3086480_3087107_-	YqaJ viral recombinase family protein	A0A125RNR2	Pseudomonas_phage	6.4e-120	100.0
WP_014603745.1\|3087110_3087731_-	ERF family protein	A0A125RNR3	Pseudomonas_phage	1.8e-106	100.0
WP_014603746.1\|3087871_3088936_-	hypothetical protein	Q9MC69	Pseudomonas_phage	5.6e-84	94.9
WP_023098766.1\|3089115_3089253_-	hypothetical protein	A0A0S2SY24	Pseudomonas_phage	1.9e-16	97.7
WP_171950530.1\|3089249_3090011_-	DNA cytosine methyltransferase	W0LM09	Edwardsiella_phage	2.3e-63	60.3
WP_034063451.1\|3090123_3090513_-	hypothetical protein	A0A125RNR7	Pseudomonas_phage	1.1e-69	99.2
WP_041025733.1\|3090509_3091025_-	hypothetical protein	Q9MC57	Pseudomonas_phage	2.2e-46	54.4
WP_003088379.1\|3091021_3091387_-	hypothetical protein	A0A125RNR9	Pseudomonas_phage	2.2e-64	95.0
WP_126583779.1\|3091800_3092112_-	hypothetical protein	NA	NA	NA	NA
WP_023125081.1\|3092146_3092407_-	hypothetical protein	B5WZX2	Pseudomonas_phage	1.9e-06	36.1
WP_003088383.1\|3092433_3092784_-	hypothetical protein	A0A1W6DWS2	Sphingobium_phage	3.5e-19	44.0
WP_031640142.1\|3093159_3093357_-	hypothetical protein	A0A0S2SYA6	Pseudomonas_phage	1.3e-26	83.1
WP_003088385.1\|3093429_3093699_-	hypothetical protein	NA	NA	NA	NA
WP_003088387.1\|3093948_3094155_-	hypothetical protein	A0A0U4IJ22	Pseudomonas_phage	2.5e-33	94.1
WP_173399890.1\|3094165_3094468_-	hypothetical protein	A0A0U4B0I0	Pseudomonas_phage	2.9e-46	92.0
WP_020750346.1\|3094841_3095495_-	zinc-ribbon domain-containing protein	NA	NA	NA	NA
WP_033991089.1\|3095608_3096049_-	type II toxin-antitoxin system YafO family toxin	A0A0S2SYH1	Pseudomonas_phage	7.7e-80	97.9
WP_033991091.1\|3096057_3096600_-	hypothetical protein	A0A0S2SYL8	Pseudomonas_phage	6.6e-89	97.8
WP_033867552.1\|3097003_3097918_-	hypothetical protein	NA	NA	NA	NA
WP_033991093.1\|3097995_3098469_-	hypothetical protein	NA	NA	NA	NA
WP_049821776.1\|3098563_3099052_-	hypothetical protein	NA	NA	NA	NA
WP_024007928.1\|3099099_3099768_-	helix-turn-helix transcriptional regulator	A0A125RNS6	Pseudomonas_phage	2.7e-124	99.1
WP_015980312.1\|3099855_3100077_+	helix-turn-helix domain-containing protein	A0A125RNS7	Pseudomonas_phage	5.8e-36	100.0
WP_141401729.1\|3100389_3100602_+	hypothetical protein	A0A0S2SYE2	Pseudomonas_phage	1.9e-20	92.7
WP_014603753.1\|3100768_3101686_+	YdaU family protein	Q8W642	Enterobacteria_phage	2.7e-18	58.0
WP_014603754.1\|3101682_3103512_+	toprim domain-containing protein	A0A0U4B0G9	Pseudomonas_phage	0.0e+00	94.3
WP_014603755.1\|3103627_3103843_+	hypothetical protein	A0A125RNK4	Pseudomonas_phage	2.2e-32	93.0
WP_014603756.1\|3103835_3104252_+	recombination protein NinB	B5WZY4	Pseudomonas_phage	1.7e-76	100.0
WP_031688190.1\|3104248_3104584_+	hypothetical protein	NA	NA	NA	NA
WP_034005849.1\|3104580_3104850_+	hypothetical protein	B5WZY5	Pseudomonas_phage	1.1e-41	92.0
WP_153562489.1\|3104846_3105005_+	hypothetical protein	A0A0S2SYG6	Pseudomonas_phage	1.6e-11	63.5
WP_033894961.1\|3105001_3105235_+	hypothetical protein	A0A0S2SYK5	Pseudomonas_phage	5.2e-35	97.4
WP_014603757.1\|3105231_3105876_+	recombination protein NinG	A0A0S2SY91	Pseudomonas_phage	4.3e-111	94.4
WP_024007940.1\|3105872_3106445_+	hypothetical protein	H2BDI9	Pseudomonas_virus	2.9e-26	36.9
WP_023434898.1\|3107217_3107550_+	peptidase M48	A0A125RNL3	Pseudomonas_phage	2.6e-56	100.0
WP_014603758.1\|3107552_3107825_+	hypothetical protein	A0A125RNL4	Pseudomonas_phage	3.1e-39	97.8
WP_044719990.1\|3107815_3108400_+\|terminase	terminase small subunit	A0A2P9HY59	Yersinia_phage	1.8e-60	67.0
WP_014603760.1\|3108389_3109853_+	hypothetical protein	G0ZND4	Cronobacter_phage	1.5e-241	83.5
WP_014603761.1\|3109852_3110050_+	hypothetical protein	H2BD77	Pseudomonas_phage	2.3e-28	100.0
WP_034005440.1\|3110052_3111423_+	DUF1073 domain-containing protein	A0A125RNL9	Pseudomonas_phage	1.0e-263	98.2
WP_173399893.1\|3111385_3112309_+\|head	phage head morphogenesis protein	H2BD79	Pseudomonas_phage	8.4e-169	98.7
WP_014603764.1\|3112312_3113590_+	hypothetical protein	H2BD80	Pseudomonas_phage	2.4e-214	99.1
WP_014603765.1\|3113593_3114043_+	hypothetical protein	A0A125RNM2	Pseudomonas_phage	6.2e-77	98.7
WP_014603766.1\|3114058_3115153_+	hypothetical protein	J7I0Q9	Pseudomonas_phage	7.0e-207	98.6
3114210:3114225	attR	NA	NA	NA	NA
WP_014603768.1\|3115438_3115840_+	hypothetical protein	J7HX89	Pseudomonas_phage	7.8e-71	98.5
WP_041025734.1\|3115836_3116157_+	hypothetical protein	J7I4I8	Pseudomonas_phage	1.5e-56	97.2
WP_023124723.1\|3116158_3116563_+	hypothetical protein	J7I0Q5	Pseudomonas_phage	2.1e-68	99.3
WP_014603770.1\|3116559_3116934_+	hypothetical protein	J7I407	Pseudomonas_phage	8.3e-67	98.4
WP_014603771.1\|3116948_3117944_+	Ig-like domain-containing protein	J7HX84	Pseudomonas_phage	2.9e-159	94.3
WP_014603772.1\|3117940_3118558_+	hypothetical protein	A0A125RNN1	Pseudomonas_phage	1.3e-112	98.5
WP_014603773.1\|3118557_3121569_+	tape measure protein	H2BD91	Pseudomonas_phage	0.0e+00	98.5
WP_016852774.1\|3121565_3122033_+	hypothetical protein	H2BD92	Pseudomonas_phage	1.4e-92	99.4
WP_014603775.1\|3122016_3122508_+	DUF1833 family protein	J7I404	Pseudomonas_phage	2.3e-88	96.3
WP_014603776.1\|3122512_3122920_+	hypothetical protein	J7HX80	Pseudomonas_phage	3.4e-74	98.5
WP_014603777.1\|3122891_3125615_+	hypothetical protein	H2BD95	Pseudomonas_phage	0.0e+00	84.3
WP_014603779.1\|3127829_3128459_+	glycoside hydrolase family 19 protein	J7I4M6	Pseudomonas_phage	3.8e-112	96.2
WP_033989743.1\|3128455_3128824_+	hypothetical protein	J7HXL1	Pseudomonas_phage	4.2e-55	100.0

DBSCAN-SWA_4

3611103 : 3650369

Enterobacteria_phage(33.33%)

plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003089486.1\|3611103_3612435_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_003089492.1\|3612494_3612971_-	hypothetical protein	NA	NA	NA	NA
WP_003089493.1\|3613178_3613724_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_003089494.1\|3613746_3615231_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_003089495.1\|3615304_3615802_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_003089496.1\|3615814_3616240_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_003089497.1\|3616223_3618017_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_003089501.1\|3617980_3618997_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_014603835.1\|3618998_3621548_+	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	5.5e-77	29.4
WP_003089506.1\|3621621_3622155_+	hypothetical protein	NA	NA	NA	NA
WP_023098657.1\|3622193_3623261_+	hypothetical protein	NA	NA	NA	NA
WP_003089509.1\|3623297_3625304_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.2e-41	29.3
WP_003089510.1\|3625314_3625851_+	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA
WP_003089513.1\|3625873_3626269_-	DUF4280 domain-containing protein	NA	NA	NA	NA
WP_003089515.1\|3626545_3627187_+	response regulator transcription factor	NA	NA	NA	NA
WP_003089517.1\|3627387_3628593_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003089519.1\|3629009_3631325_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
WP_003089521.1\|3631321_3631792_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_003089523.1\|3632057_3632300_-	hypothetical protein	NA	NA	NA	NA
WP_003089526.1\|3632594_3632837_+	DUF1654 domain-containing protein	NA	NA	NA	NA
WP_003089528.1\|3632903_3634055_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_003114511.1\|3634151_3635072_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003139299.1\|3635617_3637906_-	acylase	NA	NA	NA	NA
WP_003089540.1\|3638028_3639360_-	SidA/IucD/PvdA family monooxygenase	NA	NA	NA	NA
WP_003089542.1\|3639476_3639956_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_003089544.1\|3640116_3641112_+	FecR family protein	NA	NA	NA	NA
WP_003089547.1\|3641211_3642387_+	pyoverdine export/recycling transporter periplasmic adaptor subunit PvdR	NA	NA	NA	NA
WP_014603836.1\|3642386_3644378_+	pyoverdine export/recycling transporter ATP-binding/permease subunit PvdT	G9BWD6	Planktothrix_phage	6.9e-35	39.3
WP_073660165.1\|3644383_3645808_+	pyoverdine export/recycling transporter outer membrane subunit OmpQ	NA	NA	NA	NA
WP_020750878.1\|3645856_3647503_-	pyoverdine maturation tyrosinase PvdP	NA	NA	NA	NA
WP_003089553.1\|3647716_3649063_+\|tail	pyoverdine-tailoring dipeptidase-like protein PvdM	NA	NA	NA	NA
WP_003089554.1\|3649085_3650369_+\|tail	pyoverdine-tailoring periplasmic protein PvdN	NA	NA	NA	NA

DBSCAN-SWA_5

3954588 : 3961482

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003090386.1\|3954588_3955257_+	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.5e-90	82.1
WP_003090387.1\|3955367_3955763_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	2.7e-47	72.1
WP_003090389.1\|3955759_3956119_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.4e-34	61.7
WP_003090391.1\|3956118_3956424_+	sulfurtransferase complex subunit TusB	NA	NA	NA	NA
WP_003090393.1\|3956420_3956756_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	3.3e-38	69.4
WP_003090395.1\|3956752_3957736_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	2.1e-141	73.7
WP_003090397.1\|3957823_3958798_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_003108773.1\|3958802_3960200_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_003090402.1\|3960201_3961482_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.4e-97	45.2

DBSCAN-SWA_6

4150733 : 4231660

100

uncultured_Caudovirales_phage(33.33%)

integrase,portal,plate,tail,capsid,protease,lysis,terminase,tRNA,head

attL 4159739:4159756|attR 4230079:4230096

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014603870.1\|4150733_4151204_+\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_003160516.1\|4151255_4151642_-	hypothetical protein	NA	NA	NA	NA
WP_003090812.1\|4151828_4152272_-	PACE efflux transporter	NA	NA	NA	NA
WP_003090813.1\|4152374_4153262_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003090814.1\|4153472_4153787_-	hypothetical protein	NA	NA	NA	NA
WP_003090815.1\|4154151_4155432_+	OprD family porin	NA	NA	NA	NA
WP_019485079.1\|4155543_4155960_+	hypothetical protein	NA	NA	NA	NA
WP_003090818.1\|4156002_4156347_-	cupin domain-containing protein	NA	NA	NA	NA
WP_003090820.1\|4156458_4156668_-	hypothetical protein	NA	NA	NA	NA
WP_003090821.1\|4156938_4157127_+	hypothetical protein	NA	NA	NA	NA
WP_003090822.1\|4157141_4157351_-	hypothetical protein	NA	NA	NA	NA
WP_003090823.1\|4157681_4158377_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_073660286.1\|4158424_4159324_-	Dyp-type peroxidase	A0A0M5KAH8	Mollivirus	4.5e-18	28.9
WP_003090825.1\|4159665_4160247_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
4159739:4159756	attL	NA	NA	NA	NA
WP_003090826.1\|4160334_4161303_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_003090827.1\|4161308_4161791_+	hypothetical protein	NA	NA	NA	NA
WP_003090829.1\|4161941_4162352_-	NUDIX domain-containing protein	A0A1L7N0J3	Ralstonia_phage	2.3e-22	42.5
WP_003090830.1\|4162373_4163153_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
WP_003099145.1\|4163254_4163494_-	hypothetical protein	NA	NA	NA	NA
WP_003090832.1\|4163864_4164698_+	acid phosphatase	NA	NA	NA	NA
WP_003090833.1\|4164731_4164956_-	hypothetical protein	NA	NA	NA	NA
WP_003090834.1\|4165116_4165287_+	hypothetical protein	NA	NA	NA	NA
WP_073660287.1\|4165306_4165828_-	hypothetical protein	NA	NA	NA	NA
WP_003138819.1\|4166026_4166614_-	hypothetical protein	NA	NA	NA	NA
WP_003090838.1\|4166618_4167056_-	DUF3592 domain-containing protein	NA	NA	NA	NA
WP_003090841.1\|4167507_4168791_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_003090842.1\|4168841_4169798_-	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	1.4e-73	56.0
WP_011666615.1\|4169879_4170758_-	PA2778 family cysteine peptidase	NA	NA	NA	NA
WP_003090843.1\|4170841_4171240_-	PA2779 family protein	NA	NA	NA	NA
WP_003115217.1\|4171644_4171989_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_107236445.1\|4172003_4172651_-	flavodoxin family protein	NA	NA	NA	NA
WP_014603872.1\|4173542_4175366_+	carbohydrate binding domain-containing protein	NA	NA	NA	NA
WP_003090849.1\|4175536_4176094_+	DUF2975 domain-containing protein	NA	NA	NA	NA
WP_003090850.1\|4176102_4176321_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003090851.1\|4176435_4176903_+	GAF domain-containing protein	NA	NA	NA	NA
WP_003090852.1\|4176969_4178208_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_003090853.1\|4178229_4179825_-	type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	2.0e-32	32.0
WP_003090854.1\|4180068_4181148_+	hypothetical protein	NA	NA	NA	NA
WP_003138785.1\|4181582_4182068_+	hypothetical protein	NA	NA	NA	NA
WP_003090858.1\|4182168_4182459_-	hypothetical protein	NA	NA	NA	NA
WP_003090859.1\|4182552_4183149_-	hypothetical protein	NA	NA	NA	NA
WP_003090863.1\|4183229_4184264_-	hypothetical protein	NA	NA	NA	NA
WP_003116580.1\|4184530_4185187_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003090864.1\|4185291_4186506_+	MFS transporter	NA	NA	NA	NA
WP_003104048.1\|4186533_4187127_+	cysteine hydrolase	NA	NA	NA	NA
WP_014603873.1\|4188013_4188529_+	hypothetical protein	L7TIE6	Pseudomonas_virus	6.2e-97	95.9
WP_014603874.1\|4188824_4189514_+	SOS response-associated peptidase	A0A2K8I970	Pseudomonas_phage	5.7e-122	90.4
WP_014603875.1\|4189495_4189759_-	hypothetical protein	A0A0S2SYE1	Pseudomonas_phage	1.1e-41	93.1
WP_041025739.1\|4190450_4190948_+	hypothetical protein	NA	NA	NA	NA
WP_173399891.1\|4191275_4191830_-\|lysis	lysis protein	NA	NA	NA	NA
WP_041025741.1\|4191826_4192456_-	glycoside hydrolase family 19 protein	J7I4M6	Pseudomonas_phage	2.0e-97	86.1
WP_014603877.1\|4192567_4192753_+	hypothetical protein	NA	NA	NA	NA
WP_014603878.1\|4192790_4193843_-	phage late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	2.2e-133	70.1
WP_015649042.1\|4193856_4194063_-\|tail	tail protein X	A0A2H4J9Z9	uncultured_Caudovirales_phage	9.6e-17	62.7
WP_014603880.1\|4194037_4194877_-\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	6.0e-81	54.3
WP_014603881.1\|4194885_4197576_-\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	6.9e-46	30.2
WP_014603883.1\|4197714_4198011_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_014603884.1\|4198020_4198530_-\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	9.8e-87	97.6
WP_014603885.1\|4198542_4199703_-\|tail	phage tail sheath family protein	Q38068	Phage_PS17	1.1e-215	97.9
WP_023127307.1\|4199746_4200211_-	hypothetical protein	Q9ZXK5	Pseudomonas_virus	4.0e-18	38.6
WP_014603887.1\|4200207_4202289_-\|tail	phage tail protein	Q9ZXK6	Pseudomonas_virus	2.8e-111	50.3
WP_014603888.1\|4202285_4202816_-\|tail	phage tail protein I	A0A2H4JDH5	uncultured_Caudovirales_phage	3.4e-50	56.9
WP_014603889.1\|4202812_4203697_-\|plate	baseplate J/gp47 family protein	A0A2H4JFK9	uncultured_Caudovirales_phage	7.4e-114	73.6
WP_014603890.1\|4203693_4204020_-	GPW/gp25 family protein	A0A2H4JA09	uncultured_Caudovirales_phage	2.3e-33	65.7
WP_014603891.1\|4204029_4204251_-	hypothetical protein	NA	NA	NA	NA
WP_014603892.1\|4204308_4204866_-\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	3.4e-48	67.0
WP_014603893.1\|4204862_4205399_-	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	3.0e-33	43.9
WP_014603894.1\|4205391_4206060_-	hypothetical protein	A0A2H4JBV1	uncultured_Caudovirales_phage	3.7e-65	59.3
WP_015649052.1\|4206059_4206374_-	hypothetical protein	A0A2H4J879	uncultured_Caudovirales_phage	2.1e-18	45.8
WP_014603895.1\|4206376_4206562_-	hypothetical protein	NA	NA	NA	NA
WP_014603896.1\|4206563_4207601_-\|capsid	major capsid protein	A0A0C5ABI0	Bacteriophage	1.7e-69	40.5
WP_014603897.1\|4207616_4207967_-\|head	head decoration protein	A0A291AUM0	Sinorhizobium_phage	2.5e-12	42.2
WP_014603898.1\|4207980_4209201_-	S49 family peptidase	A0A219YAK4	Aeromonas_phage	7.0e-46	34.7
WP_031652606.1\|4209203_4210817_-\|portal	phage portal protein	A0A067ZJA4	Vibrio_phage	5.5e-91	39.6
WP_014603900.1\|4210819_4211035_-	hypothetical protein	NA	NA	NA	NA
WP_049821835.1\|4211047_4212934_-\|terminase	phage terminase large subunit family protein	A0A2D1GMT1	Marinobacter_phage	2.7e-161	50.0
WP_023127296.1\|4212977_4213502_-\|terminase	terminase small subunit	A0A2D1GMW4	Marinobacter_phage	1.5e-18	37.2
WP_014603903.1\|4213616_4213979_-	hypothetical protein	NA	NA	NA	NA
WP_019396873.1\|4214550_4214922_-	hypothetical protein	NA	NA	NA	NA
WP_049243292.1\|4214918_4217165_-	toprim domain-containing protein	A0A2D1GN57	Marinobacter_phage	8.2e-194	47.7
WP_023118639.1\|4217128_4217338_-	TraR/DksA C4-type zinc finger protein	NA	NA	NA	NA
WP_014603906.1\|4217330_4217885_-	hypothetical protein	NA	NA	NA	NA
WP_019726484.1\|4218201_4218456_-	helix-turn-helix domain-containing protein	A0A2H4JA29	uncultured_Caudovirales_phage	1.5e-06	45.6
WP_171894642.1\|4218469_4219276_+	helix-turn-helix domain-containing protein	F1C599	Cronobacter_phage	2.7e-22	35.8
WP_023087724.1\|4219558_4219870_+	hypothetical protein	NA	NA	NA	NA
WP_014603908.1\|4219879_4220173_+	phage antirepressor KilAC domain-containing protein	NA	NA	NA	NA
WP_031673600.1\|4220326_4220635_+	hypothetical protein	NA	NA	NA	NA
WP_031639816.1\|4220631_4220949_+	pyocin activator PrtN family protein	NA	NA	NA	NA
WP_014603910.1\|4220999_4221626_+	hypothetical protein	NA	NA	NA	NA
WP_014603911.1\|4221622_4221862_+	hypothetical protein	NA	NA	NA	NA
WP_014603912.1\|4221870_4222431_+	Lar family restriction alleviation protein	G4WAD0	Salmonella_phage	6.3e-10	44.9
WP_041025744.1\|4222427_4222910_+	hypothetical protein	NA	NA	NA	NA
WP_041025745.1\|4222906_4224742_+	DNA cytosine methyltransferase	A0A1I9KFW0	Aeromonas_phage	5.0e-96	38.2
WP_014603914.1\|4224738_4226109_+	hypothetical protein	H2BD37	Pseudomonas_phage	1.8e-66	56.5
WP_003160559.1\|4226399_4226684_+	pyocin activator PrtN family protein	A0A2K8HN48	Pseudomonas_phage	8.0e-46	100.0
WP_031689695.1\|4226693_4227800_-\|integrase	tyrosine-type recombinase/integrase	L7TP61	Pseudomonas_virus	9.6e-212	98.6
WP_031635261.1\|4227903_4228908_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_003090868.1\|4228987_4229911_+	transaldolase	A0A1D8KMI9	Synechococcus_phage	6.5e-12	30.0
WP_003090869.1\|4229996_4230479_-	STAS domain-containing protein	NA	NA	NA	NA
4230079:4230096	attR	NA	NA	NA	NA
WP_003090870.1\|4230475_4231660_-	SpoIIE family protein phosphatase	Q56AR1	Bacillus_thuringiensis_phage	7.3e-08	31.9

DBSCAN-SWA_7

5115844 : 5124873

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003092260.1\|5115844_5116885_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.5e-113	59.5
WP_003092262.1\|5117018_5117525_-	CinA family protein	B5TK85	Pseudomonas_phage	8.1e-57	76.0
WP_003092265.1\|5117672_5118680_+	TolB family protein	NA	NA	NA	NA
WP_003122151.1\|5118805_5121373_+	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	2.4e-24	22.1
WP_003092272.1\|5121439_5121763_+	ferredoxin family protein	NA	NA	NA	NA
WP_003113871.1\|5122189_5123194_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	7.0e-36	37.3
WP_003092335.1\|5123298_5124192_-	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	3.0e-06	34.3
WP_073660134.1\|5124237_5124873_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.3e-40	52.3

DBSCAN-SWA_8

5268678 : 5306745

Pseudomonas_phage(94.0%)

integrase,head,protease,transposase

attL 5273977:5273993|attR 5277564:5277580

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003127781.1\|5268678_5269047_-	hypothetical protein	J9SGX4	Pseudomonas_phage	1.1e-63	100.0
WP_003117363.1\|5269043_5269592_-	hypothetical protein	J9RWB3	Pseudomonas_phage	2.1e-98	100.0
WP_014603985.1\|5269591_5270158_-	regulatory protein GemA	J9SVT5	Pseudomonas_phage	5.4e-102	100.0
WP_003129239.1\|5270144_5270612_-	hypothetical protein	J9SH82	Pseudomonas_phage	6.3e-56	100.0
WP_003117360.1\|5270613_5270832_-	hypothetical protein	J9STW0	Pseudomonas_phage	1.1e-31	100.0
WP_014603987.1\|5270833_5271229_-	hypothetical protein	J9SNQ5	Pseudomonas_phage	4.2e-69	100.0
WP_014603988.1\|5271230_5271854_-	DUF3164 family protein	J9STG3	Pseudomonas_phage	5.9e-110	99.5
WP_014603989.1\|5271846_5272047_-	hypothetical protein	J9SVU3	Pseudomonas_phage	2.3e-31	98.5
WP_023123655.1\|5272039_5272573_-	hypothetical protein	J9STN6	Pseudomonas_phage	2.5e-93	99.4
WP_041025751.1\|5272562_5273243_-	hypothetical protein	J9SNC1	Pseudomonas_phage	5.8e-127	98.7
WP_014603990.1\|5273242_5273527_-	hypothetical protein	J9SGZ7	Pseudomonas_phage	3.4e-44	100.0
WP_014603991.1\|5273523_5273865_-	hypothetical protein	J9RWC3	Pseudomonas_phage	1.3e-55	98.2
WP_014603992.1\|5273866_5275033_-	AAA family ATPase	J9SVV1	Pseudomonas_phage	4.9e-214	98.7
5273977:5273993	attL	NA	NA	NA	NA
WP_014603993.1\|5275032_5276817_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	J9STP5	Pseudomonas_phage	0.0e+00	98.8
WP_014603994.1\|5276820_5277795_-	hypothetical protein	J9RW58	Pseudomonas_phage	4.0e-153	97.5
5277564:5277580	attR	NA	NA	NA	NA
WP_003142307.1\|5277804_5278119_-	hypothetical protein	J9SUN0	Pseudomonas_phage	2.9e-49	98.1
WP_003142306.1\|5278115_5278376_-	hypothetical protein	J9RWD0	Pseudomonas_phage	1.5e-38	95.3
WP_010791820.1\|5278368_5278857_-	hypothetical protein	J9SNL8	Pseudomonas_phage	2.8e-91	99.4
WP_015649394.1\|5278980_5279205_+	hypothetical protein	NA	NA	NA	NA
WP_003142304.1\|5279489_5279720_-	DNA-binding protein	J9RW65	Pseudomonas_phage	2.5e-37	100.0
WP_157783244.1\|5279904_5280165_+	hypothetical protein	J9SH16	Pseudomonas_phage	1.8e-12	82.6
WP_003094225.1\|5280875_5281133_+	membrane protein	A0A0S4L5C0	Pseudomonas_phage	7.2e-38	100.0
WP_014603995.1\|5281135_5281294_+	hypothetical protein	J9SNF4	Pseudomonas_phage	1.7e-21	98.1
WP_014603996.1\|5281290_5281920_+	transglycosylase SLT domain-containing protein	J9SH25	Pseudomonas_phage	8.4e-120	99.0
WP_041025752.1\|5282121_5282745_+	hypothetical protein	J9SVX5	Pseudomonas_phage	2.9e-109	98.1
WP_003117315.1\|5282744_5283065_+	DUF2730 family protein	J9STR5	Pseudomonas_phage	5.1e-49	100.0
WP_003121465.1\|5283061_5283364_+	hypothetical protein	J9SNG3	Pseudomonas_phage	4.1e-48	99.0
WP_003117313.1\|5283366_5283915_+	DUF3486 family protein	J9SH37	Pseudomonas_phage	7.6e-77	99.5
WP_014603997.1\|5283916_5285590_+	hypothetical protein	J9RWF2	Pseudomonas_phage	0.0e+00	99.3
WP_010791816.1\|5285583_5287158_+	DUF935 domain-containing protein	J9SVY0	Pseudomonas_phage	2.0e-287	96.4
WP_014603998.1\|5287147_5288386_+	hypothetical protein	J9STS2	Pseudomonas_phage	3.4e-242	99.8
WP_015649417.1\|5288387_5288963_+	phage virion morphogenesis protein	J9SNH3	Pseudomonas_phage	1.7e-103	99.0
WP_014603999.1\|5289173_5290283_+\|protease	phage protease	J9SH47	Pseudomonas_phage	8.4e-200	98.6
WP_003121593.1\|5290288_5290693_+	hypothetical protein	J9RWG0	Pseudomonas_phage	1.8e-67	100.0
WP_014604000.1\|5290707_5291604_+\|head	Mu-like prophage major head subunit gpT family protein	J9SVY7	Pseudomonas_phage	3.0e-171	99.7
WP_015649419.1\|5291616_5292051_+	hypothetical protein	J9STT1	Pseudomonas_phage	1.1e-49	99.0
WP_003121492.1\|5292053_5292569_+	DUF1320 domain-containing protein	J9SNI4	Pseudomonas_phage	3.5e-92	100.0
WP_003127511.1\|5292565_5293018_+	hypothetical protein	J9SH57	Pseudomonas_phage	5.5e-81	100.0
WP_003127509.1\|5293014_5293218_+	hypothetical protein	J9RWG5	Pseudomonas_phage	1.7e-29	100.0
WP_010791812.1\|5293224_5293965_+	hypothetical protein	J9SVZ4	Pseudomonas_phage	1.2e-136	100.0
WP_023086241.1\|5293967_5294450_+	hypothetical protein	J9STT8	Pseudomonas_phage	1.3e-83	100.0
WP_049967619.1\|5294404_5294587_-	hypothetical protein	J9SNJ6	Pseudomonas_phage	1.2e-26	100.0
WP_014604003.1\|5294703_5298336_+	tape measure protein	J9SH65	Pseudomonas_phage	0.0e+00	95.7
WP_014604004.1\|5298335_5299292_+	hypothetical protein	A0A0A7DK02	Pseudomonas_phage	1.5e-184	95.9
WP_014604005.1\|5299293_5300217_+	hypothetical protein	B7SE07	Pseudomonas_virus	5.4e-176	93.8
WP_041025753.1\|5300216_5301923_+	hypothetical protein	A0A0S4L0R5	Pseudomonas_phage	0.0e+00	96.7
WP_010791806.1\|5301909_5302728_+	phage BR0599 family protein	J9SP65	Pseudomonas_phage	4.5e-166	100.0
WP_003094285.1\|5302737_5302968_+	hypothetical protein	Q5ZQW1	Pseudomonas_phage	1.2e-36	100.0
WP_014604008.1\|5303181_5305392_+	hypothetical protein	Q5ZQV9	Pseudomonas_phage	0.0e+00	97.8
WP_014604009.1\|5306233_5306536_+	hypothetical protein	A0SMR0	Pseudomonas_virus	1.6e-47	92.0
WP_014604010.1\|5306532_5306745_+	hypothetical protein	A0SMR1	Pseudomonas_virus	7.3e-28	92.8

DBSCAN-SWA_9

5761861 : 5830338

Pseudomonas_phage(74.51%)

capsid,protease,transposase,terminase,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003093554.1\|5761861_5762425_+\|protease	DJ-1/PfpI/YhbO family deglycase/protease	A0A0N7KVR4	Yellowstone_lake_phycodnavirus	2.6e-11	31.5
WP_003093556.1\|5762447_5763248_+	exodeoxyribonuclease III	NA	NA	NA	NA
WP_003093558.1\|5763279_5763678_-	RidA family protein	NA	NA	NA	NA
WP_003093559.1\|5763818_5764742_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003110541.1\|5765274_5766663_+\|protease	protease IV	NA	NA	NA	NA
WP_003093561.1\|5766982_5767264_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_003093563.1\|5767406_5767808_+	GFA family protein	NA	NA	NA	NA
WP_003093564.1\|5767907_5768651_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_003093566.1\|5768888_5770184_+	OprD family porin	NA	NA	NA	NA
WP_003093568.1\|5770226_5771870_-	acetolactate synthase large subunit	NA	NA	NA	NA
WP_003093570.1\|5772154_5772874_+	B3/4 domain-containing protein	NA	NA	NA	NA
WP_003093573.1\|5772901_5773540_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA
WP_003118992.1\|5773543_5774011_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA
WP_003093577.1\|5774036_5775059_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_003093580.1\|5775365_5776094_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003093583.1\|5776187_5777507_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_003093585.1\|5777643_5778972_+	MFS transporter	NA	NA	NA	NA
WP_003093588.1\|5779036_5779948_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
WP_014604043.1\|5779940_5781431_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_003093592.1\|5781598_5782804_+	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_003129339.1\|5782808_5783453_-	response regulator transcription factor	NA	NA	NA	NA
WP_014604044.1\|5783455_5785732_-	PAS domain S-box protein	NA	NA	NA	NA
WP_003093598.1\|5785977_5787600_+	acyl-CoA synthetase	A0A2H4PQU7	Staphylococcus_phage	3.0e-36	27.5
WP_003093599.1\|5787717_5789499_+	acyl-CoA dehydrogenase C-terminal domain-containing protein	NA	NA	NA	NA
WP_003093600.1\|5789706_5790573_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_003093601.1\|5790612_5791653_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_003093602.1\|5791748_5792804_-	nitronate monooxygenase	NA	NA	NA	NA
WP_003093603.1\|5792911_5793766_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003093604.1\|5793845_5795012_+	lactonase family protein	NA	NA	NA	NA
WP_010791890.1\|5795400_5795625_-	hypothetical protein	A0A0A1IX79	Pseudomonas_phage	2.5e-34	100.0
WP_014604045.1\|5795703_5795922_-	hypothetical protein	A0A0S4L0C9	Pseudomonas_phage	1.1e-26	88.7
WP_014604009.1\|5795918_5796221_-	hypothetical protein	A0SMR0	Pseudomonas_virus	1.6e-47	92.0
WP_014604046.1\|5797062_5799270_-	hypothetical protein	I6PCB1	Pseudomonas_phage	0.0e+00	98.5
WP_004367213.1\|5799259_5799478_-	hypothetical protein	I6P9E8	Pseudomonas_phage	3.4e-36	100.0
WP_003126844.1\|5799474_5799714_-	hypothetical protein	I6P9F0	Pseudomonas_phage	4.4e-37	98.7
WP_023127434.1\|5799722_5800544_-	phage BR0599 family protein	I6PBD5	Pseudomonas_phage	2.7e-155	99.2
WP_023127435.1\|5800533_5802237_-	hypothetical protein	Q6TM53	Pseudomonas_phage	0.0e+00	95.9
WP_014604049.1\|5802236_5803160_-	hypothetical protein	B7SE07	Pseudomonas_virus	7.1e-184	97.1
WP_014604050.1\|5803161_5804118_-	hypothetical protein	A0SMQ2	Pseudomonas_virus	7.8e-186	97.2
WP_014604051.1\|5804124_5807829_-	tape measure protein	B7SE05	Pseudomonas_virus	0.0e+00	96.8
WP_014604052.1\|5807955_5808453_-	hypothetical protein	A0A1C6ZDR0	Pseudomonas_phage	1.6e-78	100.0
WP_014604053.1\|5808456_5809230_-	hypothetical protein	A0A1C6ZDP0	Pseudomonas_phage	9.0e-132	93.4
WP_014604054.1\|5809255_5809441_-	hypothetical protein	A0A1C6ZDM1	Pseudomonas_phage	3.0e-25	100.0
WP_014604055.1\|5809428_5809902_-	hypothetical protein	A0A0A1IUZ7	Pseudomonas_phage	8.6e-85	99.4
WP_010791902.1\|5809898_5810315_-	DUF1320 domain-containing protein	A0A0A1IX76	Pseudomonas_phage	3.9e-73	100.0
WP_003094562.1\|5810311_5810479_-	hypothetical protein	L7P7P7	Pseudomonas_phage	3.1e-21	100.0
WP_014604056.1\|5810478_5810919_-	hypothetical protein	A0A125RNI2	Pseudomonas_phage	9.5e-46	99.3
WP_003099452.1\|5810986_5811901_-\|head	Mu-like prophage major head subunit gpT family protein	I6PBD3	Pseudomonas_phage	9.2e-176	100.0
WP_014604057.1\|5811904_5813002_-\|protease	phage protease	A0A125RNI0	Pseudomonas_phage	1.6e-198	99.2
WP_014604058.1\|5813204_5813672_-	phage virion morphogenesis protein	B7SDZ4	Pseudomonas_virus	8.2e-80	98.1
WP_014604059.1\|5813671_5814946_-\|capsid	minor capsid protein	B7SDZ3	Pseudomonas_virus	3.9e-241	98.6
WP_014604060.1\|5814945_5816526_-	DUF935 domain-containing protein	A0A0A1IVG5	Pseudomonas_phage	6.4e-302	99.8
WP_014604061.1\|5816535_5818188_-\|terminase	phage terminase large subunit	B7SDZ1	Pseudomonas_virus	0.0e+00	99.6
WP_031759181.1\|5818186_5818714_+	hypothetical protein	I6PCA7	Pseudomonas_phage	2.6e-98	99.4
WP_012613783.1\|5818719_5819220_-	DUF1804 family protein	A0A1C6ZDN3	Pseudomonas_phage	2.9e-83	100.0
WP_003094538.1\|5819228_5819417_-	hypothetical protein	A0A0A1IVG3	Pseudomonas_phage	1.0e-25	100.0
WP_014604063.1\|5819527_5819929_-	hypothetical protein	H6V8N0	Pseudomonas_phage	8.3e-65	97.7
WP_014604064.1\|5819925_5820168_-	hypothetical protein	A0A0A1IUY9	Pseudomonas_phage	2.2e-36	95.0
WP_014604065.1\|5820167_5820584_-	structural protein	A0A0A1IX72	Pseudomonas_phage	3.9e-73	98.6
WP_015649662.1\|5820583_5821054_-	hypothetical protein	A7Y8L4	Pseudomonas_virus	1.8e-82	100.0
WP_023127440.1\|5820998_5821346_-	hypothetical protein	A0A0A7DJC3	Pseudomonas_phage	2.5e-57	100.0
WP_023127441.1\|5821448_5821898_-	hypothetical protein	A0A076FR28	Pseudomonas_phage	1.8e-79	99.3
WP_014604067.1\|5821890_5822292_-	regulatory protein GemA	A0A0A1IUY7	Pseudomonas_phage	3.3e-69	99.2
WP_023102203.1\|5822288_5822510_-	hypothetical protein	A0A125RNA7	Pseudomonas_phage	3.9e-40	100.0
WP_014604068.1\|5822596_5822866_-	hypothetical protein	A0A076FSV2	Pseudomonas_phage	9.3e-44	96.6
WP_014604069.1\|5822874_5823324_-	hypothetical protein	A0A125RNA5	Pseudomonas_phage	3.2e-73	95.3
WP_014604070.1\|5823323_5823515_-	hypothetical protein	A0A125RNA4	Pseudomonas_phage	1.9e-27	98.4
WP_014604071.1\|5823516_5823798_-	hypothetical protein	A0A0U5KRI9	unidentified_phage	2.3e-45	98.9
WP_023127442.1\|5823800_5824109_-	hypothetical protein	A0A1C6ZDJ5	Pseudomonas_phage	1.1e-48	100.0
WP_003094490.1\|5824110_5824392_-	hypothetical protein	L7P7W6	Pseudomonas_phage	9.3e-47	100.0
WP_014604072.1\|5824393_5824597_-	hypothetical protein	I6PBV7	Pseudomonas_phage	1.0e-26	94.0
WP_014604073.1\|5824596_5825115_-	host-nuclease inhibitor Gam family protein	L7P7S4	Pseudomonas_phage	1.1e-90	99.4
WP_014604074.1\|5825131_5825443_-	hypothetical protein	H6V800	Pseudomonas_virus	3.1e-51	100.0
WP_014604075.1\|5825405_5825819_-	hypothetical protein	A0A0A1IWY8	Pseudomonas_phage	4.7e-71	99.3
WP_023127444.1\|5825955_5826531_-	hypothetical protein	B7SDX2	Pseudomonas_virus	3.4e-104	97.9
WP_014604077.1\|5826602_5827268_-	hypothetical protein	A0A0A1IVF7	Pseudomonas_phage	2.5e-122	98.2
WP_014604078.1\|5827264_5828017_-	ATP-binding protein	I6PCA3	Pseudomonas_phage	1.7e-95	76.9
WP_014604079.1\|5828037_5830338_-\|transposase	Mu transposase C-terminal domain-containing protein	I6P9C2	Pseudomonas_phage	1.9e-97	35.6

DBSCAN-SWA_10

5920486 : 6005670

Pseudomonas_phage(20.59%)

holin,integrase,plate,tail,tRNA

attL 5995697:5995713|attR 6009962:6009978

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003085275.1\|5920486_5921686_-\|tRNA	tyrosine--tRNA ligase	NA	NA	NA	NA
WP_003129241.1\|5921970_5923314_+	peptidoglycan DD-metalloendopeptidase family protein	O03937	Lactobacillus_phage	3.0e-18	44.1
WP_003085271.1\|5923316_5924408_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
WP_003085254.1\|5924461_5924812_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	3.0e-26	53.2
WP_073660265.1\|5924889_5925312_-	polymer-forming cytoskeletal protein	NA	NA	NA	NA
WP_003085249.1\|5925312_5926032_-	hypothetical protein	NA	NA	NA	NA
WP_003085247.1\|5926031_5927066_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_003085245.1\|5927356_5927779_+	protoporphyrinogen oxidase HemJ	NA	NA	NA	NA
WP_003085244.1\|5927795_5928764_+	nitronate monooxygenase	NA	NA	NA	NA
WP_003085240.1\|5928885_5929968_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_003085237.1\|5930028_5930829_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_003085227.1\|5930868_5932350_-	AAA family ATPase	U5XJW0	Phormidium_phage	6.7e-67	33.8
WP_003085225.1\|5932428_5932767_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_003085224.1\|5932866_5933514_+	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA
WP_003085223.1\|5933568_5934363_-	adenosylmethionine decarboxylase	NA	NA	NA	NA
WP_003085219.1\|5934682_5935105_-	OsmC family protein	NA	NA	NA	NA
WP_003085214.1\|5935376_5936021_+	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA
WP_003085205.1\|5936082_5936919_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	2.1e-70	56.9
WP_003085203.1\|5936915_5937965_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.8e-111	57.8
WP_003085194.1\|5937966_5938572_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.1e-75	66.3
WP_003118919.1\|5938919_5939177_-	hypothetical protein	A0A125RNP3	Pseudomonas_phage	8.3e-18	64.6
WP_003085190.1\|5939173_5939536_-	hypothetical protein	H2BDA0	Pseudomonas_phage	6.5e-16	48.7
WP_003085188.1\|5939532_5940162_-	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	3.2e-87	78.5
WP_003085186.1\|5940194_5941184_-	phage late control D family protein	A0A2H4JBF6	uncultured_Caudovirales_phage	3.7e-106	55.8
WP_003101635.1\|5941241_5941448_-\|tail	tail protein X	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.3e-18	64.2
WP_003085182.1\|5941422_5942295_-\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	3.9e-75	51.7
WP_023098436.1\|5942304_5944542_-\|tail	phage tail length determinator protein	NA	NA	NA	NA
WP_003085178.1\|5944711_5945056_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_003085175.1\|5945070_5945574_-\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	8.0e-65	73.5
WP_003085173.1\|5945586_5946747_-\|tail	phage tail sheath family protein	Q38068	Phage_PS17	1.2e-188	83.4
WP_003085172.1\|5946789_5947230_-\|tail	tail fiber assembly protein	NA	NA	NA	NA
WP_003085168.1\|5947238_5949347_-\|tail	phage tail protein	Q9ZXK6	Pseudomonas_virus	2.6e-218	51.1
WP_003137385.1\|5949348_5949882_-\|tail	phage tail protein I	Q9ZXK7	Pseudomonas_virus	5.2e-62	64.6
WP_003085151.1\|5949874_5950762_-	bacteriophage protein	S4TNY7	Salmonella_phage	5.3e-88	59.8
WP_003085143.1\|5950758_5951085_-	GPW/gp25 family protein	A0A2H4JA09	uncultured_Caudovirales_phage	3.2e-30	60.2
WP_003085141.1\|5951237_5951795_-\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	4.6e-45	71.1
WP_003085139.1\|5951791_5952307_-	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	4.1e-32	42.9
WP_003137382.1\|5952328_5952778_-\|holin	holin	B5TK61	Pseudomonas_phage	5.0e-26	53.3
WP_003085135.1\|5953140_5953500_-	hypothetical protein	NA	NA	NA	NA
WP_003085132.1\|5953547_5953748_-	repressor PtrB	W6ATC1	Enterobacter_phage	3.7e-05	58.3
WP_003085129.1\|5954205_5954976_+	helix-turn-helix transcriptional regulator	A0A1B0Z078	Pseudomonas_phage	6.1e-72	59.0
WP_003085128.1\|5955075_5955390_+	pyocin activator PrtN family protein	NA	NA	NA	NA
WP_003085126.1\|5955576_5957055_-	anthranilate synthase component I	NA	NA	NA	NA
WP_003085124.1\|5957127_5957946_-	phosphoglycolate phosphatase	NA	NA	NA	NA
WP_003085122.1\|5957945_5958620_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_003085119.1\|5958743_5959574_-	ABC transporter permease	NA	NA	NA	NA
WP_014604087.1\|5959679_5960927_-	ABC transporter permease	NA	NA	NA	NA
WP_003085111.1\|5961041_5962088_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003085109.1\|5962143_5963253_-	polyamine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.8e-28	34.4
WP_003085106.1\|5963486_5964521_-	polyamine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003085103.1\|5964649_5965282_-	response regulator transcription factor	NA	NA	NA	NA
WP_023098434.1\|5965327_5967721_-	PAS domain S-box protein	NA	NA	NA	NA
WP_003085099.1\|5967872_5968934_+	alpha/beta hydrolase family protein	NA	NA	NA	NA
WP_003085097.1\|5968934_5969693_-	DnaJ domain-containing protein	NA	NA	NA	NA
WP_003085095.1\|5969694_5970369_-	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_003085094.1\|5970365_5971382_-	phosphotransferase	NA	NA	NA	NA
WP_003085092.1\|5971508_5974310_+	LPS-assembly protein LptD	NA	NA	NA	NA
WP_003109024.1\|5974290_5975583_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_003085089.1\|5975579_5976566_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_003085087.1\|5976681_5977488_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_003085085.1\|5977524_5977905_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
WP_003085083.1\|5977904_5978756_+	symmetrical bis(5'-nucleosyl)-tetraphosphatase	A0A2R4ALP3	Aeromonas_phage	2.4e-08	44.2
WP_003085081.1\|5978799_5979132_+	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA
WP_003085078.1\|5979410_5981333_+	PrkA family serine protein kinase	NA	NA	NA	NA
WP_003085075.1\|5981433_5982705_+	YeaH/YhbH family protein	A0A140HLI1	Bacillus_phage	4.2e-09	37.2
WP_003085073.1\|5982701_5984255_+	SpoVR family protein	NA	NA	NA	NA
WP_003085071.1\|5984349_5984856_+	DUF4136 domain-containing protein	NA	NA	NA	NA
WP_003085069.1\|5984899_5986132_+	multifunctional CCA addition/repair protein	A0A076G5T8	Escherichia_phage	1.6e-77	43.1
WP_003085067.1\|5986104_5986647_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_003099587.1\|5986637_5986991_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_003085061.1\|5987074_5987644_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_003085059.1\|5987722_5988748_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	8.3e-109	58.1
WP_003085057.1\|5988948_5989164_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_003085042.1\|5989233_5989683_+	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	5.0e-18	38.8
WP_003085039.1\|5989765_5991760_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.8e-73	40.7
WP_003085035.1\|5991839_5993693_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.2e-36	33.8
WP_003085029.1\|5993799_5997537_+	bifunctional diguanylate cyclase/phosphodiesterase	A0A127AWB9	Bacillus_phage	4.8e-13	35.4
5995697:5995713	attL	NA	NA	NA	NA
WP_023103853.1\|5997993_5998671_+	hypothetical protein	NA	NA	NA	NA
WP_023103852.1\|5999181_5999403_-	hypothetical protein	NA	NA	NA	NA
WP_003085024.1\|5999407_5999590_-	hypothetical protein	NA	NA	NA	NA
WP_023103851.1\|5999591_5999789_-	hypothetical protein	NA	NA	NA	NA
WP_003085020.1\|5999785_6000247_-	hypothetical protein	NA	NA	NA	NA
WP_003085018.1\|6000284_6000992_-	hypothetical protein	NA	NA	NA	NA
WP_023103850.1\|6001166_6001472_-	hypothetical protein	NA	NA	NA	NA
WP_003085013.1\|6001690_6003751_-	AAA family ATPase	A0A2H4GYD5	Pseudomonas_phage	1.3e-57	46.2
WP_003085011.1\|6003904_6004129_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003085009.1\|6004350_6005670_-\|integrase	integrase family protein	A0A291LA13	Bordetella_phage	8.7e-10	22.5
6009962:6009978	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_017549

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection