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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_018510 Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence 0 crisprs csa3 0 0 7 0
NC_018516 Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence 1 crisprs NA 0 2 1 0
NC_018511 Bacillus thuringiensis HD-789 plasmid pBTHD789-5, complete sequence 0 crisprs NA 0 0 0 0
NC_018517 Bacillus thuringiensis HD-789 plasmid pBTHD789-4, complete sequence 0 crisprs NA 0 0 1 0
NC_018508 Bacillus thuringiensis HD-789, complete sequence 3 crisprs csa3,WYL,c2c9_V-U4,cas14j,DinG,cas3,DEDDh,cas14k 0 3 13 0
NC_018509 Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence 0 crisprs RT,cas4 0 0 2 0
NC_018512 Bacillus thuringiensis HD-789 plasmid pBTHD789-6, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NC_018508
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018508_1 192488-192563 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018508_2 4521837-4521953 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018508_3 4777128-4777261 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_018508_1 1.1|192513|26|NC_018508|CRISPRCasFinder 192513-192538 26 NZ_CP045855 Agrobacterium sp. MA01 plasmid punnamed1, complete sequence 103187-103212 5 0.808
NC_018508_3 3.1|4777151|31|NC_018508|CRISPRCasFinder 4777151-4777181 31 JX238501 Bacillus phage phiAGATE, complete genome 124559-124589 8 0.742
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 NZ_CP014851 Bacillus thuringiensis strain HD12 plasmid pHD120112, complete sequence 100650-100683 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 MN812210 Flavobacterium phage vB_FspS_hemulen9-1, complete genome 22854-22887 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 MN812215 Flavobacterium phage vB_FspS_lillamy9-4, complete genome 22191-22224 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 MN812216 Flavobacterium phage vB_FspS_lillamy9-5, complete genome 22191-22224 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 NC_048835 Flavobacterium phage vB_FspS_lillamy9-1, complete genome 22191-22224 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 MN812213 Flavobacterium phage vB_FspS_lillamy9-2, complete genome 22191-22224 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 MN812230 Flavobacterium phage vB_FspS_sniff9-2, complete genome 21831-21864 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 MN812209 Flavobacterium phage vB_FspS_hemulen6-2, complete genome 22983-23016 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 MN812218 Flavobacterium phage vB_FspS_lillamy9-7, complete genome 21454-21487 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 MN812233 Flavobacterium phage vB_FspS_snork9-1, complete genome 22007-22040 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 MN812219 Flavobacterium phage vB_FspS_morran9-1, complete genome 22308-22341 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 MN812217 Flavobacterium phage vB_FspS_lillamy9-6, complete genome 21930-21963 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 NC_048840 Flavobacterium phage vB_FspS_snork6-1, complete genome 22137-22170 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 NC_048839 Flavobacterium phage vB_FspS_sniff9-1, complete genome 22057-22090 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 NC_048842 Flavobacterium phage vB_FspS_stinky9-1, complete genome 21673-21706 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 MN812232 Flavobacterium phage vB_FspS_snork6-2, complete genome 21655-21688 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 MN812208 Flavobacterium phage vB_FspS_hemulen6-1, complete genome 22983-23016 8 0.765
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 NZ_HG813246 Staphylococcus epidermidis PM221 plasmid 1, complete sequence 47181-47214 11 0.676
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 NZ_HG813246 Staphylococcus epidermidis PM221 plasmid 1, complete sequence 47565-47598 11 0.676
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 NZ_HG813246 Staphylococcus epidermidis PM221 plasmid 1, complete sequence 47949-47982 11 0.676
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 NZ_HG813246 Staphylococcus epidermidis PM221 plasmid 1, complete sequence 48333-48366 11 0.676
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 NZ_HG813246 Staphylococcus epidermidis PM221 plasmid 1, complete sequence 48717-48750 11 0.676
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 NZ_HG813246 Staphylococcus epidermidis PM221 plasmid 1, complete sequence 49101-49134 11 0.676
NC_018508_3 3.2|4777205|34|NC_018508|CRISPRCasFinder 4777205-4777238 34 NZ_HG813246 Staphylococcus epidermidis PM221 plasmid 1, complete sequence 49485-49518 11 0.676

1. spacer 1.1|192513|26|NC_018508|CRISPRCasFinder matches to NZ_CP045855 (Agrobacterium sp. MA01 plasmid punnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

tggtgggcacaatcataacggcggac	CRISPR spacer
atctgggcacaatcatagcggcggaa	Protospacer
   **************.******* 

2. spacer 3.1|4777151|31|NC_018508|CRISPRCasFinder matches to JX238501 (Bacillus phage phiAGATE, complete genome) position: , mismatch: 8, identity: 0.742

ttcttcttttttgtcactagttgaaccgctt	CRISPR spacer
ctaaccttttttgccactagttaaaccgccc	Protospacer
.*  .********.********.******..

3. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to NZ_CP014851 (Bacillus thuringiensis strain HD12 plasmid pHD120112, complete sequence) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tttatcttcttttttattttctggtttattttcc	Protospacer
.**.****** ****************  * ..*

4. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to MN812210 (Flavobacterium phage vB_FspS_hemulen9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

5. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to MN812215 (Flavobacterium phage vB_FspS_lillamy9-4, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

6. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to MN812216 (Flavobacterium phage vB_FspS_lillamy9-5, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

7. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to NC_048835 (Flavobacterium phage vB_FspS_lillamy9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

8. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to MN812213 (Flavobacterium phage vB_FspS_lillamy9-2, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

9. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to MN812230 (Flavobacterium phage vB_FspS_sniff9-2, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

10. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to MN812209 (Flavobacterium phage vB_FspS_hemulen6-2, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

11. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to MN812218 (Flavobacterium phage vB_FspS_lillamy9-7, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

12. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to MN812233 (Flavobacterium phage vB_FspS_snork9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

13. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to MN812219 (Flavobacterium phage vB_FspS_morran9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

14. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to MN812217 (Flavobacterium phage vB_FspS_lillamy9-6, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

15. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to NC_048840 (Flavobacterium phage vB_FspS_snork6-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

16. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to NC_048839 (Flavobacterium phage vB_FspS_sniff9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

17. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to NC_048842 (Flavobacterium phage vB_FspS_stinky9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

18. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to MN812232 (Flavobacterium phage vB_FspS_snork6-2, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

19. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to MN812208 (Flavobacterium phage vB_FspS_hemulen6-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

20. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

21. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

22. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

23. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

24. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

25. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

26. spacer 3.2|4777205|34|NC_018508|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 215088 : 223246 8 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_2 1404002 : 1412857 8 Bacillus_phage(71.43%) NA NA
DBSCAN-SWA_3 1598894 : 1605804 9 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_4 2898896 : 2990640 87 Bacillus_phage(82.09%) head,portal,tail,capsid,terminase,protease,integrase,holin,coat attL 2978741:2978758|attR 3001578:3001595
DBSCAN-SWA_5 3050146 : 3060495 11 Bacillus_phage(100.0%) bacteriocin NA
DBSCAN-SWA_6 3064935 : 3090676 36 Bacillus_phage(56.52%) integrase,terminase,capsid attL 3054451:3054469|attR 3101622:3101640
DBSCAN-SWA_7 3205998 : 3214289 12 uncultured_Caudovirales_phage(44.44%) bacteriocin NA
DBSCAN-SWA_8 3269483 : 3399626 118 Bacillus_phage(43.4%) head,portal,tail,capsid,terminase,tRNA,protease,integrase,holin,bacteriocin,coat attL 3290449:3290466|attR 3398861:3398878
DBSCAN-SWA_9 3817790 : 3829033 11 Bacillus_phage(100.0%) bacteriocin NA
DBSCAN-SWA_10 3835862 : 3858352 25 Bacillus_phage(75.0%) integrase,terminase attL 3850392:3850407|attR 3864023:3864038
DBSCAN-SWA_11 3994502 : 4056260 60 Klosneuvirus(22.22%) tRNA,coat,protease,transposase NA
DBSCAN-SWA_12 4098462 : 4106150 9 Staphylococcus_phage(16.67%) NA NA
DBSCAN-SWA_13 5363735 : 5372111 8 Synechococcus_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_018516
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018516_1 267554-267691 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_018516_1 1.1|267578|30|NC_018516|CRISPRCasFinder 267578-267607 30 NC_018516 Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence 267578-267607 0 1.0
NC_018516_1 1.1|267578|30|NC_018516|CRISPRCasFinder 267578-267607 30 NZ_CP053970 Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence 162869-162898 0 1.0
NC_018516_1 1.1|267578|30|NC_018516|CRISPRCasFinder 267578-267607 30 NZ_CP053979 Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence 71082-71111 0 1.0
NC_018516_1 1.1|267578|30|NC_018516|CRISPRCasFinder 267578-267607 30 NZ_CP013277 Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence 289404-289433 0 1.0
NC_018516_1 1.1|267578|30|NC_018516|CRISPRCasFinder 267578-267607 30 NZ_CP039723 Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence 56805-56834 0 1.0
NC_018516_1 1.1|267578|30|NC_018516|CRISPRCasFinder 267578-267607 30 NZ_CP009348 Bacillus thuringiensis HD1002 plasmid 2, complete sequence 289405-289434 0 1.0
NC_018516_1 1.1|267578|30|NC_018516|CRISPRCasFinder 267578-267607 30 NZ_CP009334 Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence 201775-201804 0 1.0
NC_018516_1 1.1|267578|30|NC_018516|CRISPRCasFinder 267578-267607 30 NZ_CP045024 Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence 289017-289046 0 1.0
NC_018516_1 1.2|267632|36|NC_018516|CRISPRCasFinder 267632-267667 36 NC_018516 Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence 267632-267667 0 1.0
NC_018516_1 1.2|267632|36|NC_018516|CRISPRCasFinder 267632-267667 36 NZ_CP053970 Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence 162809-162844 0 1.0
NC_018516_1 1.2|267632|36|NC_018516|CRISPRCasFinder 267632-267667 36 NZ_CP053979 Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence 71022-71057 0 1.0
NC_018516_1 1.2|267632|36|NC_018516|CRISPRCasFinder 267632-267667 36 NZ_CP013277 Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence 289344-289379 0 1.0
NC_018516_1 1.2|267632|36|NC_018516|CRISPRCasFinder 267632-267667 36 NZ_CP039723 Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence 56745-56780 0 1.0
NC_018516_1 1.2|267632|36|NC_018516|CRISPRCasFinder 267632-267667 36 NZ_CP009348 Bacillus thuringiensis HD1002 plasmid 2, complete sequence 289345-289380 0 1.0
NC_018516_1 1.2|267632|36|NC_018516|CRISPRCasFinder 267632-267667 36 NZ_CP009334 Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence 201829-201864 0 1.0
NC_018516_1 1.2|267632|36|NC_018516|CRISPRCasFinder 267632-267667 36 NZ_CP045024 Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence 288957-288992 0 1.0
NC_018516_1 1.1|267578|30|NC_018516|CRISPRCasFinder 267578-267607 30 NZ_CP022523 Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence 39281-39310 5 0.833

1. spacer 1.1|267578|30|NC_018516|CRISPRCasFinder matches to NC_018516 (Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence) position: , mismatch: 0, identity: 1.0

gttgagacttcgcttgttgtgtttgagcaa	CRISPR spacer
gttgagacttcgcttgttgtgtttgagcaa	Protospacer
******************************

2. spacer 1.1|267578|30|NC_018516|CRISPRCasFinder matches to NZ_CP053970 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gttgagacttcgcttgttgtgtttgagcaa	CRISPR spacer
gttgagacttcgcttgttgtgtttgagcaa	Protospacer
******************************

3. spacer 1.1|267578|30|NC_018516|CRISPRCasFinder matches to NZ_CP053979 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

gttgagacttcgcttgttgtgtttgagcaa	CRISPR spacer
gttgagacttcgcttgttgtgtttgagcaa	Protospacer
******************************

4. spacer 1.1|267578|30|NC_018516|CRISPRCasFinder matches to NZ_CP013277 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence) position: , mismatch: 0, identity: 1.0

gttgagacttcgcttgttgtgtttgagcaa	CRISPR spacer
gttgagacttcgcttgttgtgtttgagcaa	Protospacer
******************************

5. spacer 1.1|267578|30|NC_018516|CRISPRCasFinder matches to NZ_CP039723 (Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

gttgagacttcgcttgttgtgtttgagcaa	CRISPR spacer
gttgagacttcgcttgttgtgtttgagcaa	Protospacer
******************************

6. spacer 1.1|267578|30|NC_018516|CRISPRCasFinder matches to NZ_CP009348 (Bacillus thuringiensis HD1002 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

gttgagacttcgcttgttgtgtttgagcaa	CRISPR spacer
gttgagacttcgcttgttgtgtttgagcaa	Protospacer
******************************

7. spacer 1.1|267578|30|NC_018516|CRISPRCasFinder matches to NZ_CP009334 (Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

gttgagacttcgcttgttgtgtttgagcaa	CRISPR spacer
gttgagacttcgcttgttgtgtttgagcaa	Protospacer
******************************

8. spacer 1.1|267578|30|NC_018516|CRISPRCasFinder matches to NZ_CP045024 (Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

gttgagacttcgcttgttgtgtttgagcaa	CRISPR spacer
gttgagacttcgcttgttgtgtttgagcaa	Protospacer
******************************

9. spacer 1.2|267632|36|NC_018516|CRISPRCasFinder matches to NC_018516 (Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence) position: , mismatch: 0, identity: 1.0

actcttctttaggctgttctgttggtttaggtgctt	CRISPR spacer
actcttctttaggctgttctgttggtttaggtgctt	Protospacer
************************************

10. spacer 1.2|267632|36|NC_018516|CRISPRCasFinder matches to NZ_CP053970 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

actcttctttaggctgttctgttggtttaggtgctt	CRISPR spacer
actcttctttaggctgttctgttggtttaggtgctt	Protospacer
************************************

11. spacer 1.2|267632|36|NC_018516|CRISPRCasFinder matches to NZ_CP053979 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

actcttctttaggctgttctgttggtttaggtgctt	CRISPR spacer
actcttctttaggctgttctgttggtttaggtgctt	Protospacer
************************************

12. spacer 1.2|267632|36|NC_018516|CRISPRCasFinder matches to NZ_CP013277 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence) position: , mismatch: 0, identity: 1.0

actcttctttaggctgttctgttggtttaggtgctt	CRISPR spacer
actcttctttaggctgttctgttggtttaggtgctt	Protospacer
************************************

13. spacer 1.2|267632|36|NC_018516|CRISPRCasFinder matches to NZ_CP039723 (Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

actcttctttaggctgttctgttggtttaggtgctt	CRISPR spacer
actcttctttaggctgttctgttggtttaggtgctt	Protospacer
************************************

14. spacer 1.2|267632|36|NC_018516|CRISPRCasFinder matches to NZ_CP009348 (Bacillus thuringiensis HD1002 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

actcttctttaggctgttctgttggtttaggtgctt	CRISPR spacer
actcttctttaggctgttctgttggtttaggtgctt	Protospacer
************************************

15. spacer 1.2|267632|36|NC_018516|CRISPRCasFinder matches to NZ_CP009334 (Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

actcttctttaggctgttctgttggtttaggtgctt	CRISPR spacer
actcttctttaggctgttctgttggtttaggtgctt	Protospacer
************************************

16. spacer 1.2|267632|36|NC_018516|CRISPRCasFinder matches to NZ_CP045024 (Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

actcttctttaggctgttctgttggtttaggtgctt	CRISPR spacer
actcttctttaggctgttctgttggtttaggtgctt	Protospacer
************************************

17. spacer 1.1|267578|30|NC_018516|CRISPRCasFinder matches to NZ_CP022523 (Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence) position: , mismatch: 5, identity: 0.833

gttgagacttcgcttgttgtgttt-gagcaa	CRISPR spacer
tttgcgagttcgcttgttgtgtttcgtgca-	Protospacer
 *** ** **************** * *** 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 80407 : 90207 15 Bacillus_phage(83.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NC_018509
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 163865 : 174842 14 Bacillus_phage(55.56%) NA NA
DBSCAN-SWA_2 192819 : 228533 53 Bacillus_phage(60.71%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NC_018510
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 81903 56 Streptococcus_phage(41.67%) tRNA,transposase NA
DBSCAN-SWA_2 86596 : 166558 58 Bacillus_phage(21.43%) bacteriocin,protease,transposase NA
DBSCAN-SWA_3 176564 : 177692 1 Rhodococcus_phage(100.0%) NA NA
DBSCAN-SWA_4 181390 : 183961 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_5 194103 : 202873 7 Marinitoga_camini_virus(40.0%) integrase attL 197253:197267|attR 202495:202509
DBSCAN-SWA_6 207039 : 209853 5 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_7 220170 : 222215 3 Salmonella_phage(50.0%) integrase attL 211436:211449|attR 223486:223499
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
5. NC_018517
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 113 : 14576 22 Bacillus_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage