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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_018611 Lactobacillus buchneri subsp. silagei CD034 plasmid pCD034-3, complete sequence 0 crisprs NA 0 0 0 0
NC_016034 Lactobacillus buchneri subsp. silagei CD034 plasmid pCD034-2, complete sequence 0 crisprs NA 0 0 0 0
NC_016035 Lactobacillus buchneri subsp. silagei CD034 plasmid pCD034-1, complete sequence 0 crisprs NA 0 0 0 0
NC_018610 Lactobacillus buchneri subsp. silagei CD034, complete sequence 7 crisprs cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,cas3,DinG,csa3,csn2,cas2,cas9 0 17 4 0

Results visualization

1. NC_018610
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018610_1 115858-116559 TypeI-E I-B,III-A,III-B
11 spacers
cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018610_2 126412-127111 TypeI-E I-B,III-A,III-B:NA
11 spacers
DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018610_3 128332-129888 TypeI-E I-B,III-A,III-B
25 spacers
DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018610_4 132852-133062 TypeI-E I-B,III-A,III-B
3 spacers
DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018610_5 420773-420915 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018610_6 1941773-1942865 TypeII NA
16 spacers
csa3,csn2,cas2,cas1,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018610_7 1982668-1982770 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_018610_6 6.13|1942602|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942602-1942631 30 MG751100 Klebsiella phage KP1, complete genome 34013-34042 6 0.8
NC_018610_6 6.15|1942734|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942734-1942763 30 MN693151 Marine virus AFVG_25M560, complete genome 13726-13755 6 0.8
NC_018610_2 2.6|126745|33|NC_018610|PILER-CR,CRISPRCasFinder,CRT 126745-126777 33 NZ_CP021170 Paenibacillus bovis strain BD3526 plasmid unnamed1, complete sequence 133848-133880 7 0.788
NC_018610_6 6.1|1941809|30|NC_018610|CRISPRCasFinder,CRT 1941809-1941838 30 MN694709 Marine virus AFVG_250M204, complete genome 11796-11825 7 0.767
NC_018610_6 6.10|1942404|30|NC_018610|CRISPRCasFinder,CRT 1942404-1942433 30 MN693262 Marine virus AFVG_25M29, complete genome 33227-33256 7 0.767
NC_018610_6 6.10|1942404|30|NC_018610|CRISPRCasFinder,CRT 1942404-1942433 30 MG945492 UNVERIFIED: Microviridae sp. isolate 1297-1711, complete genome 5334-5363 7 0.767
NC_018610_6 6.11|1942470|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942470-1942499 30 MN694771 Marine virus AFVG_250M352, complete genome 21227-21256 7 0.767
NC_018610_6 6.16|1942800|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942800-1942829 30 MN693272 Marine virus AFVG_25M206, complete genome 25166-25195 7 0.767
NC_018610_6 6.16|1942800|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942800-1942829 30 MN693445 Marine virus AFVG_25M541, complete genome 19127-19156 7 0.767
NC_018610_6 6.16|1942800|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942800-1942829 30 NC_009468 Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence 175254-175283 7 0.767
NC_018610_6 6.16|1942800|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942800-1942829 30 NC_018272 Persicivirga phage P12024L, complete genome 12719-12748 7 0.767
NC_018610_3 3.24|129764|33|NC_018610|CRISPRCasFinder,CRT 129764-129796 33 NZ_CP023246 Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence 178691-178723 8 0.758
NC_018610_3 3.24|129764|33|NC_018610|CRISPRCasFinder,CRT 129764-129796 33 NZ_CP042875 Bacillus cereus strain 09 plasmid unnamed1, complete sequence 28934-28966 8 0.758
NC_018610_6 6.2|1941875|31|NC_018610|CRISPRCasFinder,CRT 1941875-1941905 31 MK448707 Streptococcus phage Javan227, complete genome 21610-21640 8 0.742
NC_018610_6 6.4|1942008|30|NC_018610|CRISPRCasFinder,CRT 1942008-1942037 30 NZ_CP012100 Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence 282776-282805 8 0.733
NC_018610_6 6.4|1942008|30|NC_018610|CRISPRCasFinder,CRT 1942008-1942037 30 NZ_CP053953 Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence 184598-184627 8 0.733
NC_018610_6 6.4|1942008|30|NC_018610|CRISPRCasFinder,CRT 1942008-1942037 30 NZ_CP045608 Bacillus cereus strain SB1 plasmid p2, complete sequence 149319-149348 8 0.733
NC_018610_6 6.4|1942008|30|NC_018610|CRISPRCasFinder,CRT 1942008-1942037 30 NZ_CP053950 Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence 78845-78874 8 0.733
NC_018610_6 6.8|1942272|30|NC_018610|CRISPRCasFinder,CRT 1942272-1942301 30 NZ_AP018173 Calothrix sp. NIES-2098 plasmid plasmid1 DNA, complete genome 49246-49275 8 0.733
NC_018610_6 6.10|1942404|30|NC_018610|CRISPRCasFinder,CRT 1942404-1942433 30 MG945812 UNVERIFIED: Microviridae sp. isolate 5509-1711, complete genome 5432-5461 8 0.733
NC_018610_6 6.10|1942404|30|NC_018610|CRISPRCasFinder,CRT 1942404-1942433 30 MG945605 UNVERIFIED: Microviridae sp. isolate 4475-1711, complete genome 5389-5418 8 0.733
NC_018610_6 6.10|1942404|30|NC_018610|CRISPRCasFinder,CRT 1942404-1942433 30 MG945825 UNVERIFIED: Microviridae sp. isolate 7568-1711, complete genome 5425-5454 8 0.733
NC_018610_6 6.13|1942602|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942602-1942631 30 MN101229 Klebsiella phage KPN5, complete genome 109003-109032 8 0.733
NC_018610_6 6.15|1942734|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942734-1942763 30 NZ_CP048880 Oceanospirillales bacterium S2-4-1H plasmid pB, complete sequence 67257-67286 8 0.733
NC_018610_6 6.16|1942800|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942800-1942829 30 MN693302 Marine virus AFVG_25M270, complete genome 18508-18537 8 0.733
NC_018610_6 6.16|1942800|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942800-1942829 30 JQ823122 Persicivirga phage P12024S, complete genome 13067-13096 8 0.733
NC_018610_1 1.2|115947|33|NC_018610|PILER-CR,CRISPRCasFinder,CRT 115947-115979 33 MK448730 Streptococcus phage Javan311, complete genome 5417-5449 9 0.727
NC_018610_3 3.16|129276|33|NC_018610|PILER-CR,CRISPRCasFinder,CRT 129276-129308 33 MK433272 Gordonia phage IDyn, complete genome 32916-32948 9 0.727
NC_018610_4 4.3|133002|33|NC_018610|CRISPRCasFinder 133002-133034 33 MF288922 Bacillus phage Janet, complete genome 95670-95702 9 0.727
NC_018610_4 4.3|133002|33|NC_018610|CRISPRCasFinder 133002-133034 33 KJ489400 Bacillus phage Hoody T, complete genome 93374-93406 9 0.727
NC_018610_4 4.3|133002|33|NC_018610|CRISPRCasFinder 133002-133034 33 MK215646 Bacillus phage vB_BthM-Goe5, complete genome 92882-92914 9 0.727
NC_018610_6 6.5|1942074|30|NC_018610|CRISPRCasFinder,CRT 1942074-1942103 30 MN693721 Marine virus AFVG_250M181, complete genome 23596-23625 9 0.7
NC_018610_6 6.8|1942272|30|NC_018610|CRISPRCasFinder,CRT 1942272-1942301 30 NZ_CP040851 Enterococcus faecium strain F17E0263 plasmid p_unnamned2, complete sequence 51235-51264 9 0.7
NC_018610_6 6.11|1942470|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942470-1942499 30 MH884510 Exiguobacterium phage vB_EalM-137, complete genome 19480-19509 9 0.7
NC_018610_6 6.13|1942602|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942602-1942631 30 NC_021794 Cellulophaga phage phi18:3, complete genome 50276-50305 9 0.7
NC_018610_6 6.14|1942668|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942668-1942697 30 MH375074 Enterococcus phage LY0323, complete genome 26591-26620 9 0.7
NC_018610_6 6.14|1942668|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942668-1942697 30 NC_042127 Enterococcus phage vB_EfaS_AL2, complete genome 26378-26407 9 0.7
NC_018610_6 6.14|1942668|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942668-1942697 30 NC_031260 Enterococcus phage Ec-ZZ2, complete genome 16386-16415 9 0.7
NC_018610_6 6.14|1942668|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942668-1942697 30 KF733017 Enterococcus phage IME-EF4, complete genome 26520-26549 9 0.7
NC_018610_6 6.16|1942800|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942800-1942829 30 NC_012040 Campylobacter lari RM2100 plasmid pCL2100, complete sequence 1981-2010 9 0.7
NC_018610_1 1.2|115947|33|NC_018610|PILER-CR,CRISPRCasFinder,CRT 115947-115979 33 NZ_CP007648 Lactobacillus salivarius strain JCM1046 plasmid pMP1046B, complete sequence 11492-11524 10 0.697
NC_018610_1 1.2|115947|33|NC_018610|PILER-CR,CRISPRCasFinder,CRT 115947-115979 33 KT588072 Enterococcus phage IME-EFm5, complete genome 37946-37978 10 0.697
NC_018610_1 1.6|116193|33|NC_018610|PILER-CR,CRISPRCasFinder,CRT 116193-116225 33 NC_047960 Enterobacteria phage vB_EcoS_IME347, complete genome 46909-46941 10 0.697
NC_018610_4 4.3|133002|33|NC_018610|CRISPRCasFinder 133002-133034 33 KU737346 Bacillus phage Vinny, complete genome 94060-94092 10 0.697
NC_018610_4 4.3|133002|33|NC_018610|CRISPRCasFinder 133002-133034 33 NC_024207 Bacillus phage Evoli, complete genome 93455-93487 10 0.697
NC_018610_4 4.3|133002|33|NC_018610|CRISPRCasFinder 133002-133034 33 MF498901 Bacillus phage Anthony, complete genome 94532-94564 10 0.697
NC_018610_6 6.11|1942470|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR 1942470-1942499 30 NZ_CP033045 Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence 295772-295801 10 0.667

1. spacer 6.13|1942602|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to MG751100 (Klebsiella phage KP1, complete genome) position: , mismatch: 6, identity: 0.8

caaccgctgaactgattccttttc--ctgaag	CRISPR spacer
aaaccgcttaactgattccatttcagctgt--	Protospacer
 ******* ********** ****  ***   

2. spacer 6.15|1942734|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to MN693151 (Marine virus AFVG_25M560, complete genome) position: , mismatch: 6, identity: 0.8

caattcaatattaaaccaacccaattgttt	CRISPR spacer
ccattaaatattgaaccaacccaattacct	Protospacer
* *** ******.*************...*

3. spacer 2.6|126745|33|NC_018610|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021170 (Paenibacillus bovis strain BD3526 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

tagtgagcgcgattgtagacttcatccaatctt	CRISPR spacer
gtgcggacgcgattgtagacttcatccagtcgt	Protospacer
  *.*..*********************.** *

4. spacer 6.1|1941809|30|NC_018610|CRISPRCasFinder,CRT matches to MN694709 (Marine virus AFVG_250M204, complete genome) position: , mismatch: 7, identity: 0.767

tcacattttccacagctagtggatcgtcgg	CRISPR spacer
gtatcttttccatagcttgtggatcgtctg	Protospacer
 .*. *******.**** ********** *

5. spacer 6.10|1942404|30|NC_018610|CRISPRCasFinder,CRT matches to MN693262 (Marine virus AFVG_25M29, complete genome) position: , mismatch: 7, identity: 0.767

catattatatcattagcaaataatcttcag	CRISPR spacer
aacttcatatcattagcaaataatattcct	Protospacer
 *. *.****************** ***  

6. spacer 6.10|1942404|30|NC_018610|CRISPRCasFinder,CRT matches to MG945492 (UNVERIFIED: Microviridae sp. isolate 1297-1711, complete genome) position: , mismatch: 7, identity: 0.767

catattatatcattagcaaataatcttcag	CRISPR spacer
tgtacaatatcattatcaaataatctacac	Protospacer
..**. ********* ********** ** 

7. spacer 6.11|1942470|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to MN694771 (Marine virus AFVG_250M352, complete genome) position: , mismatch: 7, identity: 0.767

gggttgcggcatacaaaaagccacccccgt-----	CRISPR spacer
ggattgcggcatacaaaaagcaa-----gtagatg	Protospacer
**.****************** *     **     

8. spacer 6.16|1942800|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to MN693272 (Marine virus AFVG_25M206, complete genome) position: , mismatch: 7, identity: 0.767

cggcgaatgacgaaagcgcaaaagattggg	CRISPR spacer
aagcgaatgacgaaagtgcaaaagacctag	Protospacer
 .**************.********.. .*

9. spacer 6.16|1942800|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to MN693445 (Marine virus AFVG_25M541, complete genome) position: , mismatch: 7, identity: 0.767

cggcgaatgacgaaagcgcaaaagattggg	CRISPR spacer
aagcgaatgacgaaagtgcaaaagacctag	Protospacer
 .**************.********.. .*

10. spacer 6.16|1942800|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to NC_009468 (Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence) position: , mismatch: 7, identity: 0.767

cggcgaatgacgaaagcgcaaaagattggg	CRISPR spacer
cctggagtgacgaaagcgcaaaagcttgtt	Protospacer
*   **.***************** ***  

11. spacer 6.16|1942800|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to NC_018272 (Persicivirga phage P12024L, complete genome) position: , mismatch: 7, identity: 0.767

cggcgaatgacgaaagcgcaaaagattggg	CRISPR spacer
aaacgaataacgaaagcgcacaagatggag	Protospacer
 ..*****.*********** ***** *.*

12. spacer 3.24|129764|33|NC_018610|CRISPRCasFinder,CRT matches to NZ_CP023246 (Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ttcacggtgtccagatttttgccggaactccca	CRISPR spacer
ttagaggtgtacagatttttgcgggaactacag	Protospacer
** . ***** *********** ****** * .

13. spacer 3.24|129764|33|NC_018610|CRISPRCasFinder,CRT matches to NZ_CP042875 (Bacillus cereus strain 09 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ttcacggtgtccagatttttgccggaactccca	CRISPR spacer
ttagaggtgtacagatttttgcgggaactacag	Protospacer
** . ***** *********** ****** * .

14. spacer 6.2|1941875|31|NC_018610|CRISPRCasFinder,CRT matches to MK448707 (Streptococcus phage Javan227, complete genome) position: , mismatch: 8, identity: 0.742

ccattaactgaatcatcatcagaactgtcat	CRISPR spacer
tcattatctgaatcatcataagaaacttgaa	Protospacer
.***** ************ **** . * * 

15. spacer 6.4|1942008|30|NC_018610|CRISPRCasFinder,CRT matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 8, identity: 0.733

gtctaaaatggacactatttattcatccat	CRISPR spacer
cttttttatggacactatttatttatccgc	Protospacer
 *.*   ****************.****..

16. spacer 6.4|1942008|30|NC_018610|CRISPRCasFinder,CRT matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

gtctaaaatggacactatttattcatccat	CRISPR spacer
cttttttatggacactatttatttatccgc	Protospacer
 *.*   ****************.****..

17. spacer 6.4|1942008|30|NC_018610|CRISPRCasFinder,CRT matches to NZ_CP045608 (Bacillus cereus strain SB1 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.733

gtctaaaatggacactatttattcatccat	CRISPR spacer
cttttttatggacactatttatttatccgc	Protospacer
 *.*   ****************.****..

18. spacer 6.4|1942008|30|NC_018610|CRISPRCasFinder,CRT matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

gtctaaaatggacactatttattcatccat	CRISPR spacer
cttttttatggacactatttatttatccgc	Protospacer
 *.*   ****************.****..

19. spacer 6.8|1942272|30|NC_018610|CRISPRCasFinder,CRT matches to NZ_AP018173 (Calothrix sp. NIES-2098 plasmid plasmid1 DNA, complete genome) position: , mismatch: 8, identity: 0.733

cggtgtcaatgctttgatttgtgctgccaa	CRISPR spacer
cgttgtcaatgctttgatctgtggtttatg	Protospacer
** ***************.**** * .  .

20. spacer 6.10|1942404|30|NC_018610|CRISPRCasFinder,CRT matches to MG945812 (UNVERIFIED: Microviridae sp. isolate 5509-1711, complete genome) position: , mismatch: 8, identity: 0.733

catattatatcattagcaaataatcttcag	CRISPR spacer
tgcacaatatcattatcaaataatctacac	Protospacer
...*. ********* ********** ** 

21. spacer 6.10|1942404|30|NC_018610|CRISPRCasFinder,CRT matches to MG945605 (UNVERIFIED: Microviridae sp. isolate 4475-1711, complete genome) position: , mismatch: 8, identity: 0.733

catattatatcattagcaaataatcttcag	CRISPR spacer
tgcacaatatcattatcaaataatctacac	Protospacer
...*. ********* ********** ** 

22. spacer 6.10|1942404|30|NC_018610|CRISPRCasFinder,CRT matches to MG945825 (UNVERIFIED: Microviridae sp. isolate 7568-1711, complete genome) position: , mismatch: 8, identity: 0.733

catattatatcattagcaaataatcttcag	CRISPR spacer
tgcacaatatcattatcaaataatctacac	Protospacer
...*. ********* ********** ** 

23. spacer 6.13|1942602|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to MN101229 (Klebsiella phage KPN5, complete genome) position: , mismatch: 8, identity: 0.733

caaccgctgaactgattccttttcctgaag	CRISPR spacer
aaaccgcttaactgattccatttcggcagt	Protospacer
 ******* ********** ****   *. 

24. spacer 6.15|1942734|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048880 (Oceanospirillales bacterium S2-4-1H plasmid pB, complete sequence) position: , mismatch: 8, identity: 0.733

caattcaatattaaaccaacccaattgttt	CRISPR spacer
aggttcaatattaaaccaagccaatgcaat	Protospacer
 ..**************** *****    *

25. spacer 6.16|1942800|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to MN693302 (Marine virus AFVG_25M270, complete genome) position: , mismatch: 8, identity: 0.733

cggcgaatgacgaaagcgcaaaagattggg	CRISPR spacer
aagcaaatgacgaaagtgcaaaagacctag	Protospacer
 .**.***********.********.. .*

26. spacer 6.16|1942800|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to JQ823122 (Persicivirga phage P12024S, complete genome) position: , mismatch: 8, identity: 0.733

cggcgaatgacgaaagcgcaaaagattggg	CRISPR spacer
aaacgaataacgaaagcgcacaagatgcag	Protospacer
 ..*****.*********** *****  .*

27. spacer 1.2|115947|33|NC_018610|PILER-CR,CRISPRCasFinder,CRT matches to MK448730 (Streptococcus phage Javan311, complete genome) position: , mismatch: 9, identity: 0.727

cagtctggaggactaaacaatgaaaataaccat	CRISPR spacer
cgacgaggaggactaaacaatgcaaatcacaag	Protospacer
*...  **************** **** ** * 

28. spacer 3.16|129276|33|NC_018610|PILER-CR,CRISPRCasFinder,CRT matches to MK433272 (Gordonia phage IDyn, complete genome) position: , mismatch: 9, identity: 0.727

tatgctgccgggcaccgggtcgatgtaatgggc	CRISPR spacer
gatgctgccgggcaccccgtcgatgaactctcg	Protospacer
 ***************  ******* * *    

29. spacer 4.3|133002|33|NC_018610|CRISPRCasFinder matches to MF288922 (Bacillus phage Janet, complete genome) position: , mismatch: 9, identity: 0.727

tgatttgattcaatcatttcgttatcagatttg	CRISPR spacer
ctattcgattcaatcattttgttatcacgtgct	Protospacer
. ***.*************.******* .* . 

30. spacer 4.3|133002|33|NC_018610|CRISPRCasFinder matches to KJ489400 (Bacillus phage Hoody T, complete genome) position: , mismatch: 9, identity: 0.727

tgatttgattcaatcatttcgttatcagatttg	CRISPR spacer
ctattcgattcaatcattttgttatcacgtgct	Protospacer
. ***.*************.******* .* . 

31. spacer 4.3|133002|33|NC_018610|CRISPRCasFinder matches to MK215646 (Bacillus phage vB_BthM-Goe5, complete genome) position: , mismatch: 9, identity: 0.727

tgatttgattcaatcatttcgttatcagatttg	CRISPR spacer
ctattcgattcaatcattttgttatcacgtgct	Protospacer
. ***.*************.******* .* . 

32. spacer 6.5|1942074|30|NC_018610|CRISPRCasFinder,CRT matches to MN693721 (Marine virus AFVG_250M181, complete genome) position: , mismatch: 9, identity: 0.7

aatgatttggaagtatgtagatttgatttg	CRISPR spacer
catgatttggaactatgtagatgctcgtaa	Protospacer
 *********** ********* .   * .

33. spacer 6.8|1942272|30|NC_018610|CRISPRCasFinder,CRT matches to NZ_CP040851 (Enterococcus faecium strain F17E0263 plasmid p_unnamned2, complete sequence) position: , mismatch: 9, identity: 0.7

cggtgtcaatgctttgatttgtgctgccaa	CRISPR spacer
agctgtcaatgctttgatttttgccttatt	Protospacer
 * ***************** ***. .   

34. spacer 6.11|1942470|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to MH884510 (Exiguobacterium phage vB_EalM-137, complete genome) position: , mismatch: 9, identity: 0.7

gggttgcggcatacaaaaagccacccccgt	CRISPR spacer
tcgttgatgcatacaaaaagccaccgaatc	Protospacer
  ****  *****************    .

35. spacer 6.13|1942602|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to NC_021794 (Cellulophaga phage phi18:3, complete genome) position: , mismatch: 9, identity: 0.7

caaccgctgaactgattccttttcctgaag	CRISPR spacer
tcactgctgaactgattacttttcccatgt	Protospacer
. **.************ *******.. . 

36. spacer 6.14|1942668|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to MH375074 (Enterococcus phage LY0323, complete genome) position: , mismatch: 9, identity: 0.7

agcgatgactgaaacctgttgattcttgca	CRISPR spacer
ctacattactgaaacctgttgattctattt	Protospacer
    ** *******************  . 

37. spacer 6.14|1942668|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to NC_042127 (Enterococcus phage vB_EfaS_AL2, complete genome) position: , mismatch: 9, identity: 0.7

agcgatgactgaaacctgttgattcttgca	CRISPR spacer
ctacattactgaaacctgttgattctattt	Protospacer
    ** *******************  . 

38. spacer 6.14|1942668|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to NC_031260 (Enterococcus phage Ec-ZZ2, complete genome) position: , mismatch: 9, identity: 0.7

agcgatgactgaaacctgttgattcttgca	CRISPR spacer
ctacattactgaaacctgttgattctattt	Protospacer
    ** *******************  . 

39. spacer 6.14|1942668|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to KF733017 (Enterococcus phage IME-EF4, complete genome) position: , mismatch: 9, identity: 0.7

agcgatgactgaaacctgttgattcttgca	CRISPR spacer
ctacattactgaaacctgttgattctattt	Protospacer
    ** *******************  . 

40. spacer 6.16|1942800|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to NC_012040 (Campylobacter lari RM2100 plasmid pCL2100, complete sequence) position: , mismatch: 9, identity: 0.7

cggcgaatgacgaaagcgcaaaagattggg	CRISPR spacer
aaaacaatgaagaaagcgcaaaagattttt	Protospacer
 ..  ***** ****************   

41. spacer 1.2|115947|33|NC_018610|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007648 (Lactobacillus salivarius strain JCM1046 plasmid pMP1046B, complete sequence) position: , mismatch: 10, identity: 0.697

cagtctggaggactaaacaatgaaaataaccat	CRISPR spacer
tttagtggaggacaaaacaatgaaaaaaattaa	Protospacer
.    ******** ************ **..* 

42. spacer 1.2|115947|33|NC_018610|PILER-CR,CRISPRCasFinder,CRT matches to KT588072 (Enterococcus phage IME-EFm5, complete genome) position: , mismatch: 10, identity: 0.697

cagtctggaggactaaacaatgaaaataaccat	CRISPR spacer
attaaaggaggactaaacaatggaagtaacatt	Protospacer
      ****************.**.****  *

43. spacer 1.6|116193|33|NC_018610|PILER-CR,CRISPRCasFinder,CRT matches to NC_047960 (Enterobacteria phage vB_EcoS_IME347, complete genome) position: , mismatch: 10, identity: 0.697

cgaacgttttacccgctcggacagctccgtaat	CRISPR spacer
ggaaagttttacccgctcggaaagcatgacgaa	Protospacer
 *** **************** *** . ...* 

44. spacer 4.3|133002|33|NC_018610|CRISPRCasFinder matches to KU737346 (Bacillus phage Vinny, complete genome) position: , mismatch: 10, identity: 0.697

tgatttgattcaatcatttcgttatcagatttg	CRISPR spacer
ctgttcgattcaatcattttgttatcacgtgct	Protospacer
. .**.*************.******* .* . 

45. spacer 4.3|133002|33|NC_018610|CRISPRCasFinder matches to NC_024207 (Bacillus phage Evoli, complete genome) position: , mismatch: 10, identity: 0.697

tgatttgattcaatcatttcgttatcagatttg	CRISPR spacer
ctgttcgattcaatcattttgttatcacgtgct	Protospacer
. .**.*************.******* .* . 

46. spacer 4.3|133002|33|NC_018610|CRISPRCasFinder matches to MF498901 (Bacillus phage Anthony, complete genome) position: , mismatch: 10, identity: 0.697

tgatttgattcaatcatttcgttatcagatttg	CRISPR spacer
ctgttcgattcaatcattttgttatcacgtgct	Protospacer
. .**.*************.******* .* . 

47. spacer 6.11|1942470|30|NC_018610|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.667

gggttgcggcatacaaaaagccacccccgt	CRISPR spacer
cctcagcggcaaacaaaaagccaccctata	Protospacer
   . ****** **************.   

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 939913 : 951453 23 Lactobacillus_phage(36.36%) terminase NA
DBSCAN-SWA_2 1171017 : 1179327 8 Staphylococcus_phage(28.57%) tRNA NA
DBSCAN-SWA_3 1441266 : 1449149 6 Streptococcus_phage(33.33%) protease NA
DBSCAN-SWA_4 1514558 : 1612831 90 Lactobacillus_phage(45.95%) tRNA,capsid,portal,transposase,terminase,integrase,head,protease,tail attL 1530788:1530804|attR 1609285:1609301
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage