CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_018618	Candidatus Portiera aleyrodidarum BT-QVLC, complete sequence	3 crisprs	NA	0	1	0	0

Cas Category Instructions

Results visualization

1. NC_018618

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CRISPR-Cas detection and classification

Crispr_ID: NC_018618_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018618_1

133340-133419

Orphan

Consensus_repeat	Method
TAAGCTCTAATAGATAAAACATCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018618_1

>merge|NC_018618|1|133340-133419|CRISPRCasFinder
TAAGCTCTAAGCTCTAATAGATAAAACATCACCTCTTAAATCTTAAAAGCAACCTTTAACCTCTACTAACTAACAAATAA

>NC_018618|1|1|133340-133419|CRISPRCasFinder
TAAGCTCTAAGCTCTAATAGATAA	AACATCACCTCTTAAATCTTAAAAGCAACCTT
TAACCTCTACTAACTAACAAATAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_018618.1\|WP_080586010.1\|138293_139484_+\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	unknown	unknown	gnl\|CDD\|235571
NC_018618.1\|WP_014943237.1\|115232_118079_+\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235588
NC_018618.1\|WP_014895017.1\|113747_114014_+\|50S-ribosomal-protein-L27	unknown	unknown	gnl\|CDD\|235464
NC_018618.1\|WP_014943243.1\|139504_140923_+\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|235779
NC_018618.1\|WP_014895026.1\|122607_122823_+\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NC_018618.1\|WP_014895019.1\|114977_115217_+\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|178943
NC_018618.1\|WP_014943245.1\|143362_143794_+\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
NC_018618.1\|WP_014943240.1\|134132_135566_+\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
NC_018618.1\|WP_146256541.1\|118650_119622_+\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NC_018618.1\|WP_014895034.1\|142807_143095_+\|30S-ribosomal-protein-S6	unknown	unknown	gnl\|CDD\|275385
NC_018618.1\|WP_014895027.1\|122839_122989_+\|50S-ribosomal-protein-L33	unknown	unknown	gnl\|CDD\|179075
NC_018618.1\|WP_014895018.1\|114001_114985_+\|Obg-family-GTPase-CgtA	unknown	unknown	gnl\|CDD\|237047
NC_018618.1\|WP_014943238.1\|119622_121113_+\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
NC_018618.1\|WP_014895037.1\|143790_145149_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NC_018618.1\|WP_014895025.1\|121751_122594_+\|RNA-polymerase-sigma-factor-RpoH	unknown	unknown	gnl\|CDD\|235838
NC_018618.1\|WP_014895039.1\|146960_147176_+\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
NC_018618.1\|WP_014895035.1\|143117_143357_+\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997
NC_018618.1\|WP_014895024.1\|121077_121692_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	unknown	unknown	gnl\|CDD\|367574
NC_018618.1\|WP_014895038.1\|145897_146920_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl\|CDD\|236585
NC_018618.1\|WP_014943241.1\|135596_138245_+\|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl\|CDD\|236499

Protein	Function_ID	Function_description	E-value
NC_018618.1\|WP_080586010.1\|138293_139484_+\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	gnl\|CDD\|235571	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase.	2.89887e-175
NC_018618.1\|WP_014943237.1\|115232_118079_+\|isoleucine--tRNA-ligase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NC_018618.1\|WP_014895017.1\|113747_114014_+\|50S-ribosomal-protein-L27	gnl\|CDD\|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	4.02279e-42
NC_018618.1\|WP_014943243.1\|139504_140923_+\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|235779	PRK06327, PRK06327, dihydrolipoamide dehydrogenase; Validated.	0
NC_018618.1\|WP_014895026.1\|122607_122823_+\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	1.90492e-27
NC_018618.1\|WP_014895019.1\|114977_115217_+\|30S-ribosomal-protein-S20	gnl\|CDD\|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	4.29732e-11
NC_018618.1\|WP_014943245.1\|143362_143794_+\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	8.16347e-25
NC_018618.1\|WP_014943240.1\|134132_135566_+\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NC_018618.1\|WP_146256541.1\|118650_119622_+\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	2.50595e-149
NC_018618.1\|WP_014895034.1\|142807_143095_+\|30S-ribosomal-protein-S6	gnl\|CDD\|275385	cd00473, bS6, Bacterial ribosomal protein S6. bS6 is one of the components of the small subunit of the prokaryotic ribosome, a ribonucleoprotein organelle that decodes the genetic information in messenger RNA and forms peptide bonds to synthesize the corresponding polypeptides. Ribosomes consist of a large and a small subunit, which assemble during the initiation stage of protein synthesis. Prokaryotic ribosomes consist of three molecules of RNA and more than 50 proteins. The small subunits of bacterial and eukaryotic ribosomes have the same overall shapes (with structural elements described as head, body, platform, beak and shoulder). The bacterial ribosomal protein S6 is important for the assembly of the central domain of the small subunit via heterodimerization with ribosomal protein S18.	1.71184e-15
NC_018618.1\|WP_014895027.1\|122839_122989_+\|50S-ribosomal-protein-L33	gnl\|CDD\|179075	PRK00595, rpmG, 50S ribosomal protein L33; Validated.	5.78612e-11
NC_018618.1\|WP_014895018.1\|114001_114985_+\|Obg-family-GTPase-CgtA	gnl\|CDD\|237047	PRK12298, obgE, GTPase CgtA; Reviewed.	2.39888e-105
NC_018618.1\|WP_014943238.1\|119622_121113_+\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
NC_018618.1\|WP_014895037.1\|143790_145149_+\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NC_018618.1\|WP_014895025.1\|121751_122594_+\|RNA-polymerase-sigma-factor-RpoH	gnl\|CDD\|235838	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed.	3.34233e-151
NC_018618.1\|WP_014895039.1\|146960_147176_+\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	4.80306e-14
NC_018618.1\|WP_014895035.1\|143117_143357_+\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	2.69052e-30
NC_018618.1\|WP_014895024.1\|121077_121692_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	gnl\|CDD\|367574	pfam03602, Cons_hypoth95, Conserved hypothetical protein 95.	1.57193e-46
NC_018618.1\|WP_014895038.1\|145897_146920_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl\|CDD\|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	3.97475e-129
NC_018618.1\|WP_014943241.1\|135596_138245_+\|2-oxoglutarate-dehydrogenase-E1-component	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0

>NC_018618.1|WP_014895027.1|122839_122989_+|50S-ribosomal-protein-L33
MRKKIKLVSTKGTGHCYSTYKNKRENKKKLNLKKYDPIIRRHVNYRESK
>NC_018618.1|WP_014895026.1|122607_122823_+|50S-ribosomal-protein-L28
MTKRCQITYKKPMQGNNVSHSHRKTRRRFMPNLQKHRFWIKKEKRYIKMHITTKGMRIIDKYGIEKVLIKT
>NC_018618.1|WP_014895025.1|121751_122594_+|RNA-polymerase-sigma-factor-RpoH
MIQNYPETNIEGYIKTVLGFPIISAQDEYDLARRLRNKGDLDAARCLVISNLRFVIHIARSYSGYGLQNSDIIQEGNVGLMKAVKRFDPAHGVRLVSFAIHWIKAEIHEYVLRNWRIVKIATTKSQRKLFFSLRCAKTSLNWLNREEIKSIAKDLNVKPTVVREMECRLSSTDYGFDNKQKEEKNNYKNPSNYLEDSRFDPALQFENFDFERYSYRRLYVALNKLDERVRDILKQRWLNEQKATLHELADIYGVSAERIRQLEQRAIKKIKNYINISTYI
>NC_018618.1|WP_014895024.1|121077_121692_-|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD
MINYFNVIRLIGGCKKRSILNLPYTNLHGGRCVRPTLINVREIFFDLIKNDITNKTIFDLYAGSGSLGFEAISRGAKYVLFLETNKSFVKNLYLNKKKLKFCKSVRIIKTNSIKHINKVASNSFDIIFIDPPFCRGLAYPSINLLELNGWLNDKALIYLEVESKLDLFLLPNTWTLYKELTLGNYHILLYRRFLNFTATQQRKK
>NC_018618.1|WP_014943238.1|119622_121113_+|lysine--tRNA-ligase
MIIKNYLIKDRLNKLQVLSKTANKAGKSAFYNKFRRTSLAKSLKKIFGEKNKKQLVNLKLTTAVAGRIMRKRGPFIVVQDVSSNIQLYIDKKTISNEIHKYIKDWDIGDIIGAIGDIDKSKIGELYLLVKKAYILTKSIRPLPSKFHGIKDQEIRYRHRYLDFIMNKEVRKSFKIRTRIISALRKFFYELYFLEAETPILHSMPGGAIAKPFETYNYSLNIKLYLRIAPELYLKRLVVGGFERVFEINKNFRNEGLSTWHNPEFTMLEFYWAFATYKDLMEITEHMIRFVANEALGTTIINIGNILNIDLSEPFDCLSMRDSLIKYGKTFSINNSDFYDLESLLFLSKRIGLTVANYNNYGNLLNKLFEVIVERKLIKPTFVTDYPVEVSPLARSKDSNLNITERFELFIGGREIANGFSELNDYIEQSNRFYLQLRNKYTYDLSNFDMDYIRALEYGMPPTAGEGVGIDRLVMILTNKDSIRDVLLFPLLRSRKV
>NC_018618.1|WP_146256541.1|118650_119622_+|peptide-chain-release-factor-2
MKYKNYTLGFIEIRNIFDEGHENKKAIKNVENGIYNNAELLHLAITELDSKPLSFIKQDIFFFEKELAKLDAVRLFSGDFDKNNAYVEIKAGSGGVESQDWANMLVRMYSRWAVTHDFKTETVNLNIGELLGVKSATLHIKGDYAFGWMRTEKGIHRLVRKSPFDSSKRRHTSFTSVFVYPEITSKVHNIKINTKELRIDTYRSSGAGGQHVNTTDSAVRITHLPTKIVVECQSERSQHSNKERALTLLKTKLYDFDKKKGEVERINIEKKKAGICWGNQIRSYVLDAQRIKDLRTGVKNNNCEKVLNGELDLFIEASIKQGL
>NC_018618.1|WP_014943237.1|115232_118079_+|isoleucine--tRNA-ligase
MINVRYNNTLNLPKTTFPMRGNLSIKEPIRLNKWKQSEIYKKLRQDRKGCKKFILHDGPPYANGHIHIGHAVNKILKDIIIKSKNLEGCDSWYVPGWDCHGLPIELNILKNNNGKFLTSNKIMLYCRKYVEKQIYSQKVDFIRLGILGDWDNAYRTMDFINQAGIIRSLSAIVKKGYVFRGFKPVNWCFQCSSALAESEVDFLEKVSESIDVAFFCIDNYKLVKNFGVNNCIEKPIEVVSWTTTPWSIPANQAIHVLAFCIYVLVDVGVKFILLAEQLVENCLNRYQLNGKIIAKTFGKELEKVRLKHPLHNIDAFYDRITNIYIADYIAIKTGTGIIHASPAYGEDDFIVYSNLQYNENMLKLVKSNGFYIKYLSVFGGQLIWIANSEIINNLNNRIIAKELILHSYMYCWRHKNPLIKMATSQWFVGMDVGKISLRKKALDCLKNVKVYPSSGKTRLYHMISNRPDWCISRQRSWGVPIPFFIKKKRCLLHQRIIEIMEIIAKKVQNEGSEVWIKIKSCEVFGDEDIVYKKITDILDVWFDSGTTHNHVLRGSNFILQKEDKADLYLEGLDQYRGWFHTSLITSAAISGHAPFNKLLSHCFTVDKNGQKMSKSIGNVVSPQTIISKYGADILRLWVVSKDYESEMTMSEDIIQLIADSYRRLRNTTRFMIANLSGFDQSKHGIDPEKLLALDRWALDISANFQHAIKNSYKDYRFVDIYQQLCNFCTRDLGSFYLDIIKDRQYTTQKNSLYRRSCQTTLYHIIEAMSRWITPICTFTAEEIYESLSVKRYNKSVLLETYYRELNPLPKGLVMGRVFWKIIKAVKSEVNKCLENYRKKNIIKSSLDAKVTLYVSETYYKILSLLKGELRFVLITSSAFLKKSVNKTKTAIFTGLSGLQVLVQKSKYKKCERSWELLPDVGRYNKHPKLCARSIDNLPRGPGEVRLYV
>NC_018618.1|WP_014895019.1|114977_115217_+|30S-ribosomal-protein-S20
MDKNRARRQQNSSKRSIVRTYIKRVLKAIKLKKFKLCIEEFYKAQSVFDILADKNIISKRKSARIKSRLNLQIKKELQC
>NC_018618.1|WP_014895018.1|114001_114985_+|Obg-family-GTPase-CgtA
MQFIDETYILIEAGTGGTGCLSFSSLLRGSDGGNGGTGGNIFCIGDKYLNTLFFLNYNKVYKAQNGEIGKPKKQNGNKGKDVFIKVPVGSMLRDAQTCELIGEIIIHRQNIKVAKGGTSGIGNFKTKRSKNMKGTIGESRNLYIELILLADVGCLGIPNSGKSTLIRSITSALPKVARYPFTTLRPFLGFVKLNKTYSFIITDVPGLIIGASQGLGLGLKFIKHLNRIKIICNLLDVMCNKVLDTTLGIISEIKTIYIDMFQKQRYLVLNKLDKLPKYKKSQVIEIVINGLTWRNKTTLFIISAKKKYGCYELKKSALTYLKRGING
>NC_018618.1|WP_014895017.1|113747_114014_+|50S-ribosomal-protein-L27
MAQKKAAGSSRNGRDSNSKRLGIKIYGGQYVISGNIIVRQRGTKVLAGHGVGIGRDHTLFALINGCIFFYNIKKGNRKRKCVKIVCSL
>NC_018618.1|WP_014943240.1|134132_135566_+|glutamate--tRNA-ligase
MKKIRTRIAPSPTGTPHIGTAYISLLNYYFARINNGKVILRIEDTDSKRSKSKFENKILELLHWLGIQWHEGPDIGGKFGPYRQSERNNIYNKYVEKLIKVGKVFKCYRTSEELEKLRKCKVDKTLKEKDLQLDYKELKFRKKHNWPYVIRLKVPNKGKCVFYDVLRGSITMNWDQIDSQVLIKSDGTPTYHLANVVDDYLMGITNVIRGEEWITSTPKHKLLYDYFGWKQPEFCHLPLLRNPDKSKLSKRKQNNSIEFYRKMGYLPQTIINYLGSLGGVKTTKWYRKNTNMKTKVDIKSISLGGPIFDLDKLSWLNGIYIRSMKNETLIQVMYEWAKDYIHKILPTIKPRIKILTDIIHLSEQVFYGLPKLKKEDFKVIALKKKLQIKVLKHLWLQLEYIEKWDKQNILYKVKQVSNQLQMKMKTIIAPIFIAINGRLISTSVINTIVILGKDITRIRIKQAIKLIGGITLKHENK
>NC_018618.1|WP_014943241.1|135596_138245_+|2-oxoglutarate-dehydrogenase-E1-component
MKIALDNVSYLEELYEQYKNKGNVTEEWRQIFDYITKQECRFKTIKTCEKNTIKQMSVLKLITNYRYMGHKKAHINPISGKNKVKAIQLSLHKLNIKDLNKAFNNGVGQNQSKLKEIIDVLDKTYCSSIGCEFRHILNNVEILWLEQSFESVLNKYSQKKNISLHILGLITAAEALEAYLSSNFPGTKRFGIEGGETLIAMLYETIQRAGNYGIKEIFMGMAHRGRINVLVNILRKSPADIIKEFEGKQIYEAYSGDVKYHQGLSSNIKTKGGDVKLNLAFNPSHLEIVYPVIEGAVRARQDYMNDKTKVLPVVVHGDTAFAGQGVVMETLQISKIKEYNTGGTLHILINNQIGFTTYKHNARSTKYCSDIAKMFNYPVLHVNGDDPEAVQYVTQIAVDYRNKFKKDMVIDMICYRRRGHNEADEPSITQPIMYKKIKNNPTTRELYSKHLLKQGLISKSDVKQMVSLYRHKLNYDSNNKAYKKTTGSMYKFHEEDLNDTSFSMKRMRELAVKLCDLGELKVQSKVAKIYSNRRKLVSSNSIKINWGFAELLSYASLLDEGYGIRITGQDTGRGTFSHRLAVIHNQKDGARWTPLQHIKKGQHKFTIVDSSLSEEAALAFEYGYSTTSKNMFVAWEAQFGDFANGAQVVIDQFISSGENKWGSLCSLTLLLPHGYEGQGPEHSSARIERFIQLCAEQNMQVCVPTTPSQVFHLIRSQAKRKNRKPLILMQPKSLLRHKYARSSFEDLSNGRFKTVIGETEKIKPDIVKRVILTSGKVYYDLVAYRKEKNIYETAILRIEQIYPFPEKSIIKKISIYSKCEHIIWCQEEPKNQGAWYQIKYFLNKKLKIRLKFVGRTSASAPASGYFDAHLKQQANLIKEAFF
>NC_018618.1|WP_080586010.1|138293_139484_+|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase
MKAPRFPESVNEGTVATWHKKPGDKISPYELIVEVETDKVLLEVVSPTEGFLQIIKIPVGKKCKSEQLLGIIVAQKEEGFYSSGSSSTNIKQQKLCKKEQKVDESEKQELKQFYKQAIELEESYSPEVRKAKTSIDVENLFENGTVQDKRVNIRKENVKYSINEIGVKRVQLSRLRQTITKRIVKAQKNAAMLTTYNEVDMGNILEIRTKYRELFEKKHGTKLGLMGFFVKACTVALKQFKKVNAVIDDKEIVYHNYQDIGIAVFSNRGLVVPILRHTDSIKIEEIEKKIMDFRKRGVDGKLSIKELTGGTFTISNGGVFGSLFSTPIINPPQTAILGMHKIQNRPVVLKGEIVIRPMMYLALSYDHRLIDGKDAVNFLFFVKELLEQPIRFILNI
>NC_018618.1|WP_014943243.1|139504_140923_+|dihydrolipoyl-dehydrogenase
MVSLFDVIVIGSGPAGYVAAIRSAQLGLKTACVEQWMNNGRVVYGGTCLNVGCIPSKTLLEISHKFIDAKANFEKIGINFENISINVKKMIRHKNKIVYSLNDGIAALFKANGVVVLRGSGKILTKKTVEVLHKGKLCNFQAKNIIIASGSIPRCLNQVPFNGDTIIDSAAALNLQEVPNRLGIIGAGIIGIELGSVWSRLGSKVTIFESLDKLLPVIDFSLSKQISQILKKQGLNIKFNVRIIGSEIVNNEVKVRFIDHFGEHCLTFDKLIVCIGRMPFTQSLIDKESGLVIATNGFIKVDRQCKTNLSGIYAVGDVVRGPMLAHKAAQEGIMVAELIAGNQVQLNYDTIPGVIYTSPEVAWVGKNEQQLISYGIKNYKIGIFPFANCGRARTSNEIQGLVKIITDVNDIILGVHIIGHNASELIAQGVIAMEFSSSAEDLALTCFAHPTLSEAIHEAACTASLGNTIHNI
>NC_018618.1|WP_014895034.1|142807_143095_+|30S-ribosomal-protein-S6
MNYEINILLNVNNDNLTSENIKKLIKIIIENNGRITKLEDLGNLNLYYLIKKQKQANIILINIDCEKYVIKKLEKRLKYNEVIIRYIIIKNLRQK
>NC_018618.1|WP_014895035.1|143117_143357_+|30S-ribosomal-protein-S18
MLFRKKKYCRFTAEKVKEIDYKKNDILKLYIAENGKIIPSRITGTKVRYQRKLTKAIKKARYFGLLPYTDKNYNKNGGC
>NC_018618.1|WP_014943245.1|143362_143794_+|50S-ribosomal-protein-L9
MNVILISKNSNSGKKGTIVSVNKGYARNFLIRKGFAIIAKKKNIEYLKQMRKHYLKEYKLYIYKIKTKLKNVKIEIFCKSGQTGKIVGSIGRRYLSKVFYEKYEIKINKKHITIKKNIIKKFGEYKISLYEQINIKINIQKYK
>NC_018618.1|WP_014895037.1|143790_145149_+|replicative-DNA-helicase
MKKIINDKKQTKTPPHSVEAEKALLGGVMLDNAAWKKISEIIKNEDFYSIEHKYIFDAITHIAEKNNKVDMVTVAESLETNNKLQKIGGISYLTELSRNTHSIHNIVAYADIVRECSNLRNLIRISKKIAEEAFNRNGKKVQDIIHKAEKLILTMAESRYRVKKTNLLNLNELLNKTINSINKMYSTKSSMTGLLTGFNELDNMTSGFQKADLIIIAGRPSMGKTSFAMNIVEYIIKTNKSDPVIIFSMEMPAEQLILRLLSSVGRIDQTNIRKGNIGEEDWLKLTESLKKIKNCKLYIDDTPMITPIDIRKTIKKCIRDTGKISLIMIDYLQLMHVSSSFISYNRTAEISEISRSLKSIAKEFNCPILAVSQLNRSLEQRNNKRPIISDLRESGAIEQDADLILFIYRDEVYNSDCLDNKGIAELIIGKQRNGPIGVINIRFTGKYTKFEN
>NC_018618.1|WP_014895038.1|145897_146920_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MIILGIETSCDDTCIAIYDTKSGLITTKKYTQTIHTIFGGVIPKFSSFYHLNKIIPIIKSLFFKFQIHTTNINAIAYTAGPGLYQSLLIGAYIAYSISYTLKLPILGINHLEGHIFSAMINKKKPDFPFICLLISGGNTQLIDVQNIGHYKILGESKDVSLGETFDKIAKVLKLYYPGGVRLSHLACFGKIKKQNFPKILRNNITFSFSGLKTYILNYLKQFKYTNKYQYKANLAKSFEEYVLNMLSYKCYKALIYYGRSCLLISGGVSANKTLRKHFNLFFKNKLNNFQITFPDQVLCTDNAAMIAYVGALRLTSGEKITNKLLIRPTWCLEELKYPLF
>NC_018618.1|WP_014895039.1|146960_147176_+|30S-ribosomal-protein-S21
MPYIKIRENESFEVALRRFKRSCEKGGLLAEVRRREFYEKPTTVRKRKAAAAIKRYIKKIKREHTRFERKY

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Crispr_ID: NC_018618_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018618_2

299609-299702

Orphan

Consensus_repeat	Method
TTTTTTTTCGTTCATTATTCTTTTAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018618_2

>merge|NC_018618|2|299609-299702|CRISPRCasFinder
TTTTTTTTCGTTCATTATTCTTTTAACTTTTTTCTATTGCTTTGATCTATTTCGCTGTTACTAAATCTTTTTTTTCGTTCATTATTCTTTTAAC

>NC_018618|2|2|299609-299702|CRISPRCasFinder
TTTTTTTTCGTTCATTATTCTTTTAAC	TTTTTTCTATTGCTTTGATCTATTTCGCTGTTACTAAATC
TTTTTTTTCGTTCATTATTCTTTTAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_018618.1\|WP_016858028.1\|303589_303904_-\|Grx4-family-monothiol-glutaredoxin	unknown	unknown	gnl\|CDD\|188046
NC_018618.1\|WP_014943281.1\|308116_308695_+\|aminodeoxychorismate/anthranilate-synthase-component-II	unknown	unknown	gnl\|CDD\|235552
NC_018618.1\|WP_014943279.1\|302493_303576_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|234785
NC_018618.1\|WP_014895130.1\|296414_297656_+\|acetylornithine/succinyldiaminopimelate-transaminase	unknown	unknown	gnl\|CDD\|179933
NC_018618.1\|WP_014895136.1\|305037_305802_+\|P-loop-NTPase	unknown	unknown	gnl\|CDD\|378455
NC_018618.1\|WP_014895127.1\|292091_292280_-\|YfhL-family-4Fe-4S-dicluster-ferredoxin	unknown	unknown	gnl\|CDD\|224066
NC_018618.1\|WP_014895132.1\|300323_301955_-\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NC_018618.1\|WP_014895140.1\|308700_309723_+\|anthranilate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234682
NC_018618.1\|WP_014943280.1\|306672_308139_+\|anthranilate-synthase-component-I	unknown	unknown	gnl\|CDD\|184146
NC_018618.1\|WP_014943278.1\|297649_299476_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NC_018618.1\|WP_014943273.1\|284007_286599_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
NC_018618.1\|WP_146256543.1\|281420_282641_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234701
NC_018618.1\|WP_014895133.1\|301990_302281_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NC_018618.1\|WP_014895129.1\|293594_296243_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NC_018618.1\|WP_014943276.1\|291288_292095_+\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
NC_018618.1\|WP_014943282.1\|309722_310541_+\|indole-3-glycerol-phosphate-synthase	unknown	unknown	gnl\|CDD\|234710
NC_018618.1\|WP_014943275.1\|290101_291283_+\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288
NC_018618.1\|WP_014943274.1\|286595_287072_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|237573
NC_018618.1\|WP_157677923.1\|306021_306171_+\|hypothetical-protein	unknown	unknown	unknown
NC_018618.1\|WP_014943277.1\|292282_292846_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|211789

Protein	Function_ID	Function_description	E-value
NC_018618.1\|WP_016858028.1\|303589_303904_-\|Grx4-family-monothiol-glutaredoxin	gnl\|CDD\|188046	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation. [Energy metabolism, Electron transport].	1.14535e-51
NC_018618.1\|WP_014943281.1\|308116_308695_+\|aminodeoxychorismate/anthranilate-synthase-component-II	gnl\|CDD\|235552	PRK05670, PRK05670, anthranilate synthase component II; Provisional.	9.40678e-93
NC_018618.1\|WP_014943279.1\|302493_303576_-\|argininosuccinate-synthase	gnl\|CDD\|234785	PRK00509, PRK00509, argininosuccinate synthase; Provisional.	1.41166e-129
NC_018618.1\|WP_014895130.1\|296414_297656_+\|acetylornithine/succinyldiaminopimelate-transaminase	gnl\|CDD\|179933	PRK05093, argD, acetylornithine/succinyldiaminopimelate transaminase.	0
NC_018618.1\|WP_014895136.1\|305037_305802_+\|P-loop-NTPase	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	4.3098e-99
NC_018618.1\|WP_014895127.1\|292091_292280_-\|YfhL-family-4Fe-4S-dicluster-ferredoxin	gnl\|CDD\|224066	COG1143, NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion].	2.20945e-05
NC_018618.1\|WP_014895132.1\|300323_301955_-\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NC_018618.1\|WP_014895140.1\|308700_309723_+\|anthranilate-phosphoribosyltransferase	gnl\|CDD\|234682	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional.	2.77802e-101
NC_018618.1\|WP_014943280.1\|306672_308139_+\|anthranilate-synthase-component-I	gnl\|CDD\|184146	PRK13565, PRK13565, anthranilate synthase component I; Provisional.	3.72237e-177
NC_018618.1\|WP_014943278.1\|297649_299476_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NC_018618.1\|WP_014943273.1\|284007_286599_-\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NC_018618.1\|WP_146256543.1\|281420_282641_-\|hypothetical-protein	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	1.64898e-45
NC_018618.1\|WP_014895133.1\|301990_302281_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	3.7388e-41
NC_018618.1\|WP_014895129.1\|293594_296243_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NC_018618.1\|WP_014943276.1\|291288_292095_+\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	5.28191e-114
NC_018618.1\|WP_014943282.1\|309722_310541_+\|indole-3-glycerol-phosphate-synthase	gnl\|CDD\|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	5.87198e-91
NC_018618.1\|WP_014943275.1\|290101_291283_+\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
NC_018618.1\|WP_014943274.1\|286595_287072_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|237573	PRK13963, PRK13963, rRNA maturation RNase YbeY.	5.1182e-23
NC_018618.1\|WP_014943277.1\|292282_292846_-\|peroxiredoxin	gnl\|CDD\|211789	TIGR03137, AhpC, peroxiredoxin. This peroxiredoxin (AhpC, alkylhydroperoxide reductase subunit C) is one subunit of a two-subunit complex with subunit F(TIGR03140). Usually these are found as an apparent operon. The gene has been characterized in Bacteroides fragilis, where it is important in oxidative stress defense. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue. [Cellular processes, Detoxification, Cellular processes, Adaptations to atypical conditions].	3.20696e-111

>NC_018618.1|WP_014943278.1|297649_299476_+|elongation-factor-4
MLINTKNIRNFAIIAHINHGKSTLADRLIQLCGGLYKRDFKNQVLDSLDIERERGITIKSQAVTLFYKSKQGKTYRLNLIDTPGHVDFMYEVSRSLYACEGALLLIDASQGIESQTITNFYTAFKRDLTIIPVVNKIDLPQASPKYTISNIKKIFNLHFQSVCCISTKLGLGIKVLLETLIKTIHNPKGDPYKKLLALIIDSWFSKYLGVISLVRIFDGNLKKGDQVIINSTGQSWYIQTVGFYTPKRCLTLKLSAGQVGFFVAGIKDIHGAPVGDTITHANANTDHRISGFKKVKSKIFAGLYPENVKDFKHFSTVLERLALNDASLIYTPENSNVYGCGFRIGFLGSLHLEIIKERIEREHGIKIIITLPSVKYKIKLQTGKIEYIYDPSKLPENYKLFKLYEPIVLARIIVPKIYVGNIIKECITFRGKQLCVVFINNFIKMIYELPMAEVITNFFNRLKSVSKGYASLDYEFYRFKKSNMVRLDILINNNRIEALTMIVPFDKAYKQGQFILKRIKLLLSKQLFDLNIKAVSYKKTLAKTQIKAIRKNVTAKCYGGDITRKKKLIEKQKEGKKRMKSIGNIEIKLNKNIFLSLFKTPNLFDQFS
>NC_018618.1|WP_014895130.1|296414_297656_+|acetylornithine/succinyldiaminopimelate-transaminase
MSINPKTKFKDFYKYILPLYSPQNKIPVKGYGSTIWVQDGRDYIDFSGGIAVNALGHSNPVLLEALKEQSKKVWHVSNSYTNEPSLCLAKKLVKNTFADKVFFCSSGAEANEAALKLSRRYAYNHFGSKKNIIISFKKSFHGRTFFTVNVGGKNNYSHGFGPSPFCIIHAEFNNIHNFRKVINNYTCAVIIEPIQGEGGINVANYSFFKQLRNLCKIYNALLIFDEVQCGMGRIGKLFTYMHFKIKPDIITLAKSIGCGFPLAAMLTTNKVGEAFSIGVHGSTYGGNPLACAVGNIAFDVISNKEVLSGVKRKNKLLKQHIKRINLEFNIFKEVRGLGLLIGIELNKNYINLGRKILKVAFENGLMLLNAGPNVLRLAPSLLISIEEIEEGMSRLYTTIKCIKQNFKYLEYLC
>NC_018618.1|WP_014895129.1|293594_296243_-|valine--tRNA-ligase
MKYNNWHKNWETTKRLLNTYTSVPFSIMIPPPNVTGKIHIGHAFEYTLIDTIIRQKGMQGYKTLLQFGTDHAGIATQLLMDKKLSHDKVNRMFLGRKLFLKKTLQWCNKTIPKIILQMKSIGMSVDWKKERFTMDYGFYQAVQEAFIKLYKEGLIYRGKRLINWDPNLLTALSDIEVKNLQDLGKLWYIRYHLLNIHKVEAFCQKKAYLIVATTRPETIFADTCIAVHPFDKRYKAFIGKCVVLPLIGRILPIISEEVVDIKFGTGCVKITPAHNLIDYKIGKRQNSLFINMFNNRFKVRQKAEVCILKSGILLKYNLIKLPKVYVGLSIKSLRKNIVKDLLKNKFLEKKVDNHLLMLPCGDRSCAIIEPLLTDQWFVSIKKLANLAINAVKNGNITFIPKNYEKIYINWMYNLKDWCISRQLWWGHRIPAWYDKNNIIFVGRNEEEIRSKYAINLKTKLNQDQDVLDTWFSSGLWTFTTIGWPQIRTKSFNLFHPSSVLITGFDIIPFWVSRLIMMTLKLINELPFKRIFIHGLIRDKQGQKMSKSKGNVIDPIDVIKGINYGADALRFTFLSISLPGKNINFDLRRFKGYMNFCNKIWNATRFVLSKIELFYNNEYNQFCCWENVTSINKFIISSLQNTKRKILLYFDEYRLDLASQTIYEFFWYDFCDLYLEITKIVFNSNYIGVKISTINTLLYVFKEILLLLHPFIPYITDEIWINIMQVQYKNKHITTTILNQDLPKIDINKLDDNAIYDVNFINIFITKLRCIRSLIYLNKSIKLTVFCSKVKLFYKSLINKYKIYICNLANINIIKYSEPCINCVSKKNQQFFILHIPLLSFCQRNYLVEELQKKKQLLKLSCLKINLKLNTKTSFTAITTNKK
>NC_018618.1|WP_014943277.1|292282_292846_-|peroxiredoxin
MAIINKKIRPFTATAYFNGKFINISNEDLQGKWSVIFFYPADFSFVCPTELLDLSENYSTFKTLGVEIYSVSTDTHFTHKAWHDSSFTVSKIKFPMIGDPSGNISRSFNVFVAETGLAERSTFVIDTECKIKLAEYNAIGIGRNSKELIRKIQAAQYITNHPNEVCPANWTDGSKTFKQNIDFVGKF
>NC_018618.1|WP_014895127.1|292091_292280_-|YfhL-family-4Fe-4S-dicluster-ferredoxin
MSLLITTDCINCDMCELVCPNNAIFPGEEVYVINHDLCNECIGVFPHPQCQQVCPVACIVQP
>NC_018618.1|WP_014943276.1|291288_292095_+|tryptophan-synthase-subunit-alpha
MKLNKRIINCFEQKKRAAFVTFITAGDQDYEKSLTLINSLPKAGADIIELGMPFTDPIADGEIIQKSTQRSLKTGQNQKKTLELVKAFRLFNKKTPIILMGYYNPIYRYGIKKFIKDAKNAQIDGLIIVDLPPEHAQEVSVPANKQGIDFINIITPNTNIKRIPFLVKNSSGYIYYISINGVTGGSVPIFYEVEKAVKLIRKYTNLPIAVGFGVKNRNSVKKLANISDAVVVGSALLKQIEIHCYDQKTAISNVLNLTSRLSRGLVKI
>NC_018618.1|WP_014943275.1|290101_291283_+|tryptophan-synthase-subunit-beta
MNIIPNHKGLFGNFGGRFVSETLIPLIIELEKTYKTAKKDESFRKELAYYQKTYIGRSSPLYLADRLTQALGGAKIYFKREDLNHTGAHKINNCIGQILLAKRLGKNRIIAETGAGMHGVATATVAARLGMKCVIYMGSTDVKRQKENVYRMNLLGAKVVPVNSGKGTLKDAMNEALRDWVNNIETTFYIIGTVAGPHPYPLIVRDFQSVIGKEVREQIIKIEGKLPDILVACIGGGSNAMGLFFPMIKDNTVRMIGVEAGGHGIETGKHAASLNGGVPGVIHGNRTYILQNKDGQIKDAHSISAGMDYPGIGPEHSYYYKCKRIDYVSVTDKEAIEAFKKCCYLEGIIPALESAHALAYVTKIAHSLSNKTTIVLNMSGRGDKDISIIREHS
>NC_018618.1|WP_014943274.1|286595_287072_-|rRNA-maturation-RNase-YbeY
MKKKIKCVYVHMQFIKNNTIKKIVPNESLLSSWFCSFLKPKYKHYKDIVFNIRFVEYKEIIGLNSYYRGFNSLTNIISFSYEALSQRINIQLLGELVITPTLLLYESFKKNKAFIAHCAHIIVHGLLHLIGYNHKNVTDADNMENIEYSNLNKTNIHL
>NC_018618.1|WP_014943273.1|284007_286599_-|leucine--tRNA-ligase
MMYPFSYKKIELEAQNFWYNHNCFEIVEIPNKEKFYCLCMFPYPSGNLHIGHVRNYTIGDVISRSQRMLGKNVLNPIGWDAFGMPAENAAKKNIVSPTDWTNSNIYYMYNQLKSLGFSYNWDRKITTCKIDFYRWEQWFFIKLIEHGVIYKNNAIINWDPLEKTILANEQVINGIGWRSGAKIEHRKIPSWFLKITDYAYELLRCLANIDWPESVKKMQVNWIGKYKGIEVSFKVIGSVPNCYSYLKVFTQRPDTLFGVTYILLAPDHHLVELAAQYNYQIKKLCNTFTFCGKCSLATLKNKELGLYVGYNVLHPITNEILPLYVSSFRYFEYGATASMGVPAHSHRDWDFANTYGLPFKTVVSDINGKVPDISKNAYTDFGFIINSGIFNNITCFEAFDYIFYFIKQYKSGVVKQKIKLRDWGISRQRYWGTPIPVKYGITGKQTPLTDEEIPVYLPKHGCLNSKFNLKKIPSFYVLGNGWVRDTETFDTFIESSWYYARFCCTDNNNSILDARVNYWLPVDMYIGGIEHAILHLMYARFFHKLMRDFGLVDCDEPFKKLITQGMVLTYTYYRESFGIKEWFNPLDVCLLKDKKNGNIIPTVKRDGGIVIRNGIEKMSKSKNNGIDPNVLINRFGADTLRLFVMFSAPTEQVLIWSESGIIGSSRFIKRLWNIVHTYIYISGSEHTIIKLSSLRPDQFNLYRQLQKTIKKATSDMIGRHVFNTVISTVMKLTNLVLHFIDIDSSIIGLAVTREALKSIILILAPIVPHITHVLWKVLGFSYAVIDAKWPSYNKHCMLGQLFTVLAQINGKIRKEIKLPLNYHTKTFASTILSSISIKGYLNCKEIHTLIFVHAKVINIVVSL
>NC_018618.1|WP_146256543.1|281420_282641_-|hypothetical-protein
MQKILNKEGKNINFISENTQGTIILKISSFIFEKGGQVISDVGYIYNKLGKFKVYNVIKHNSLFFHVGTLLKGYFSNTTHVNCYIDKIIRYNISVAHSAIHLLNVTIQRVAKKKLIKKGFFINQNKIIFEYKSYKPLTNKILFIIELLINRAIAKQHIILIKLLSKQKKNIKHKNVVVIGKEGGYSIDVCNGTHIKTTKNIGCFCIMSEQCVSKGIRRIEAVTNKNAVRYILKNKLTLKDLSFASNLCLNNVKKNIKHLKNKNKVLLDELNLFKQITIQKQINKLLSKMFYFFGYKFLIYKIKSKYKKDLFVILHSIVNKLVNKSIIIVYVLNKHNINVFIKITNDCLKFRPYSVFFKQVLQTNKTIFYNATTNVSYLKTSINNFNMLYTKTLKTNIKTFLFKRGL
>NC_018618.1|WP_014895132.1|300323_301955_-|chaperonin-GroEL
MAAKQIRFSEDARTRMVRGVNALADAVKTTLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELKDKFENMGAQMVKEVASKTADVAGDGTTTATVLAQAIVNEGIKQINSGRSPMDLKRGIDKAILASVEEIKKLSVKCTDSRSIAQVGTISANGDSNIGQLIAKSMEKVGKKGVITVDESRGFEDELEVVEGMQFDRGYISPYFVTNQENMTVELESPYILIVDKKISNIRELLHLLENVAKSGKPLMIIAEDIEGDALATLVVNNMRGIVKVAAAKAPGFGDRRKAMLQDLAILTGSTVISDEIGLNIEKVTIKNLGNARRITMSKENTTIIDGAGSERDIESRVKQIRKQIEETTSDYDKEKLQERVAKLSGGVAVIKVGAATEIEMKEKKARVEDALHSTRAAVEEGVVAGGGTALIRILNKLQNLKGNNEDQTHGIKIALKAFEAPLRQIVNNAGEEASVIINKVKEGVGNYGYNVSTGEFGDLINMGVLDPAKVTRTVLQSAGSIGGMIITTEAMIADHQDENNKMPHSTDGVNGMRS
>NC_018618.1|WP_014895133.1|301990_302281_-|co-chaperone-GroES
MKIRPLHDRVVVRCIEVEQKTSGGIVLPGNAQEKQNRGEVVAIGKGKILNNGAIRPLDVKIGDTVIFKESFGVEKQKIEDEEVIIMSESDILGILE
>NC_018618.1|WP_014943279.1|302493_303576_-|argininosuccinate-synthase
MSKKVILAYSGGEKQSVIANWLQCNYGYEIITFTADLGQEKKKIELAYKKAKVLGIKKMYIEDLKESFVTKYICHRFRANTIYECGKKIGASIVRPLIIKRLIEIAKLNKTTNISYGTTKKSKDLIRLDLSTYSLNPYIKIIAPWRDLNFLSQNKLRTYFKKKKFSNEFVQKHKISCSVNNDFLHIFSKCGCLDNTWNEAKKKRCILSNFFKNTPDKPTYIDITFKQGNPTSINSEVLKSHEIMIKLNNLGSKHGIGRVNKIRYYGSGLKARCCYENPGVTIFYHAHRAIESFTLDHEILQIKDILMPLYAEKVYTVNLWTKEIKMLKALIDTSQKYVNGIVRIKLYKGNVVIIGIKSDQ
>NC_018618.1|WP_016858028.1|303589_303904_-|Grx4-family-monothiol-glutaredoxin
MKNKTIEIIKNQIKKNKIILYMKGTPNLPQCGYSAQAVKFIKKYLNRFKYINVLESVHIRHELPKWSKWPTFPQLWINSKLIGGSDIIFEMYKTGELKRLIKKR
>NC_018618.1|WP_014895136.1|305037_305802_+|P-loop-NTPase
MININYIIAIASGKGGVGKSTITANLALAMNVKGYKVGLLDADIYGYSQSTILNVKKKIFINKKKRIQPIPYYGIKAMSLGFIVKKQTKAIIGRGPIISKLLVDLFTNTNWGYLDYLFIDMPPGTGDIMLSISKSISVSGVIIITTPQDVSLLGAFKGINMFNKIKIPIIGLIENMSYYTCKSCGYSTSIFNNKYNNILKKYKIKKIGCFALHKTLCDKKPILIAKPNSKISVFLKVIADIVDIKLKPQFRIGL
>NC_018618.1|WP_157677923.1|306021_306171_+|hypothetical-protein
MSYEVQIGIYLHKELDINKIHVERIKVKDNKIIVVPILCACLSMMMNIQ
>NC_018618.1|WP_014943280.1|306672_308139_+|anthranilate-synthase-component-I
MKRILIYKEIISDLDTPLSLYMKVANYHWTFLLESIEGKKQWCRYSIIGLRCHQRIEIYNNKINLFKDKIKIEKTKKIDTLVWLSNYIKTIKKTILKKNKSKTILDGGLVGYLGYDIIRLIEPTIKTYKQYNPINTPDIFLLRANELLIIDKYSGRLTILVNVNIYDLKKGLERIKIILKKLSLCANFNKTELVTHSFQTHIKHKYTLKPIFSSFNKFTFQNYIINLQKYINSGDVMQCVPSQRIIIPFYSQPFNLFRALRVLNPSPYMLFFNFNDHYVVGSSPEILVRVDNKTITLRPIAGTIQKRSGIHNEILKDYKEVSEHIMLIDLGRNDVGKVSSTVRVQNQFLIERYSHVRHIVSTLIGILKHKIDLIDIVRATFPAGTIAGAPKIRALEIINTLEPIRRGIYSGAIGFLSWNGNMNIAIAIRTAIVKNYKLHIQAGVGIIEESQYKKEWNEILNKSSVILKAALIAIVEEKGDKVENINYR
>NC_018618.1|WP_014943281.1|308116_308695_+|aminodeoxychorismate/anthranilate-synthase-component-II
MRILIIDNYDSFTFNIVHYFFELGVDVNILRNNLNIKNIENGYFTHLVISPGPCTPNKAGFSIEVIKHFANKIPILGICLGHQIIGQVFGCKMRKSTQLFHGKTSRIKHINKGLFKGFKTPILINRYHSLIIDRKYLPDNLEVTAQTDCYDITPNVIMGIKHKQYNIEGLQFHPESILSFKSHGLLKNFIKK
>NC_018618.1|WP_014895140.1|308700_309723_+|anthranilate-phosphoribosyltransferase
MINTILNKLINKRNIKFNQFYKIMKVINFGKIKSTQLASILTALSIKKETSDEIAATAKVINDYYSFNIHNNKVMDLVGTGSDNFNFFNISTSSSFVVAAAGSINVAKFGSKSISSYSGSLDLLNVLGINLYLKKKDIRKCIKRLQLVFLISEFKYKKKIRKIRMDIRIPTIFNIVGPLTNPIKPFKQLVGVYDRRLLNIFSKVFMKLGSKKTLIIHSKEGSDEISLNKATYISELNNGKIINFLINPTKFFLKKNTLDFIQIKSVLQSLDIVIHSIKGHFGLAFEMILLNAGTALYVSGIVNNIHNGLELSKYILISGKAYKKLKTIVFFTKCFKKGIL
>NC_018618.1|WP_014943282.1|309722_310541_+|indole-3-glycerol-phosphate-synthase
MKILFNILKYKRNTINVCINKLSLKILRKGFYSNKEQFSNNKFIKSIKNKQYKNQTSIIAEIKRCSPSKGIITETKNIEKLALNYFLNGAVCISILTEKNFFKGSKKYILTVKKLFDIPILFKDFIIDEYQVFEARLLCTDCILLIVSILKLDLLKKLYNLALSIGLDVLLEIHNLLELEVALFSLNAKFIGINNRNLYTFNTSINITISLLKYMPSNVVFVTESGILNVNDFIKLQRFGVNVFLIGEFLLSNNDIFLRTLLDKANKYILTY

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Crispr_ID: NC_018618_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018618_3

338340-338426

Orphan

Consensus_repeat	Method
TAACTACACAAAAACATAAAACACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018618_3

>merge|NC_018618|3|338340-338426|CRISPRCasFinder
TAACTACACAAAAACATAAAACACAGCACGTAATATCTAATTACTAACATAACTTTTTAAATTAACTACACAAAAACATAAAACACA

>NC_018618|3|3|338340-338426|CRISPRCasFinder
TAACTACACAAAAACATAAAACACA	GCACGTAATATCTAATTACTAACATAACTTTTTAAAT
TAACTACACAAAAACATAAAACACA

Protein	Signature genes	Signature genes Name	Protein_function
NC_018618.1\|WP_014895159.1\|335079_335853_-\|imidazole-glycerol-phosphate-synthase-subunit-HisF	unknown	unknown	gnl\|CDD\|234996
NC_018618.1\|WP_014895158.1\|334024_335068_-\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235440
NC_018618.1\|WP_014895171.1\|349063_349417_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NC_018618.1\|WP_014943285.1\|333072_334017_-\|homoserine-kinase	unknown	unknown	gnl\|CDD\|270702
NC_018618.1\|WP_014895151.1\|321534_322161_+\|ATP-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234971
NC_018618.1\|WP_014943290.1\|348566_348875_+\|16S-rRNA-processing-protein-RimM	unknown	unknown	gnl\|CDD\|274061
NC_018618.1\|WP_014943288.1\|345011_346754_+\|biosynthetic-type-acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|180578
NC_018618.1\|WP_014895155.1\|326467_329017_+\|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl\|CDD\|235444
NC_018618.1\|WP_014895167.1\|346760_347252_+\|acetolactate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|183365
NC_018618.1\|WP_014943284.1\|323400_324465_+\|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase	unknown	unknown	gnl\|CDD\|223352
NC_018618.1\|WP_014895160.1\|335882_336599_-\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	unknown	unknown	gnl\|CDD\|179108
NC_018618.1\|WP_014895169.1\|348309_348558_+\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|223306
NC_018618.1\|WP_014895162.1\|338803_339424_-\|imidazole-glycerol-phosphate-synthase-subunit-HisH	unknown	unknown	gnl\|CDD\|223196
NC_018618.1\|WP_014895153.1\|322631_323015_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NC_018618.1\|WP_014895152.1\|322176_322605_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NC_018618.1\|WP_014943286.1\|340935_341865_+\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NC_018618.1\|WP_014943289.1\|347273_348290_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
NC_018618.1\|WP_014895156.1\|332055_333066_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NC_018618.1\|WP_014943287.1\|342228_342873_-\|MarC-family-NAAT-transporter	unknown	unknown	gnl\|CDD\|236814
NC_018618.1\|WP_014895163.1\|339435_340023_-\|imidazoleglycerol-phosphate-dehydratase-HisB	unknown	unknown	gnl\|CDD\|234873

Protein	Function_ID	Function_description	E-value
NC_018618.1\|WP_014895159.1\|335079_335853_-\|imidazole-glycerol-phosphate-synthase-subunit-HisF	gnl\|CDD\|234996	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional.	6.8689e-154
NC_018618.1\|WP_014895158.1\|334024_335068_-\|histidinol-phosphate-transaminase	gnl\|CDD\|235440	PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional.	1.15666e-177
NC_018618.1\|WP_014895171.1\|349063_349417_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	2.48959e-53
NC_018618.1\|WP_014943285.1\|333072_334017_-\|homoserine-kinase	gnl\|CDD\|270702	cd05153, HomoserineK_II, Type II Homoserine Kinase. This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	2.0145e-101
NC_018618.1\|WP_014895151.1\|321534_322161_+\|ATP-phosphoribosyltransferase	gnl\|CDD\|234971	PRK01686, hisG, ATP phosphoribosyltransferase catalytic subunit; Reviewed.	1.20814e-92
NC_018618.1\|WP_014943290.1\|348566_348875_+\|16S-rRNA-processing-protein-RimM	gnl\|CDD\|274061	TIGR02273, Ribosome_maturation_factor_RimM, 16S rRNA processing protein RimM. This family consists of the bacterial protein RimM (YfjA, 21K), a 30S ribosomal subunit-binding protein implicated in 16S ribsomal RNA processing. It has been partially characterized in Escherichia coli, is found with other translation-associated genes such as trmD. It is broadly distributed among bacteria, including some minimal genomes such the aphid endosymbiont Buchnera aphidicola. The protein contains a PRC-barrel domain that it shares with other protein families (pfam05239) and a unique domain (pfam01782). This model describes the full-length protein. A member from Arabidopsis (plant) has additional N-terminal sequence likely to represent a chloroplast transit peptide. [Transcription, RNA processing].	1.75806e-19
NC_018618.1\|WP_014943288.1\|345011_346754_+\|biosynthetic-type-acetolactate-synthase-large-subunit	gnl\|CDD\|180578	PRK06466, PRK06466, acetolactate synthase 3 large subunit.	0
NC_018618.1\|WP_014895155.1\|326467_329017_+\|DNA-mismatch-repair-protein-MutS	gnl\|CDD\|235444	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional.	0
NC_018618.1\|WP_014895167.1\|346760_347252_+\|acetolactate-synthase-small-subunit	gnl\|CDD\|183365	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed.	5.79128e-82
NC_018618.1\|WP_014943284.1\|323400_324465_+\|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase	gnl\|CDD\|223352	COG0275, COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane].	3.14895e-53
NC_018618.1\|WP_014895160.1\|335882_336599_-\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	gnl\|CDD\|179108	PRK00748, PRK00748, 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated.	3.71551e-101
NC_018618.1\|WP_014895169.1\|348309_348558_+\|30S-ribosomal-protein-S16	gnl\|CDD\|223306	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis].	2.5862e-32
NC_018618.1\|WP_014895162.1\|338803_339424_-\|imidazole-glycerol-phosphate-synthase-subunit-HisH	gnl\|CDD\|223196	COG0118, HisH, Glutamine amidotransferase [Amino acid transport and metabolism].	5.20603e-79
NC_018618.1\|WP_014895153.1\|322631_323015_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	5.0145e-65
NC_018618.1\|WP_014895152.1\|322176_322605_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	2.17825e-66
NC_018618.1\|WP_014943286.1\|340935_341865_+\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	1.74436e-65
NC_018618.1\|WP_014943289.1\|347273_348290_+\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
NC_018618.1\|WP_014895156.1\|332055_333066_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	3.23413e-09
NC_018618.1\|WP_014943287.1\|342228_342873_-\|MarC-family-NAAT-transporter	gnl\|CDD\|236814	PRK10995, PRK10995, MarC family NAAT transporter.	4.43669e-63
NC_018618.1\|WP_014895163.1\|339435_340023_-\|imidazoleglycerol-phosphate-dehydratase-HisB	gnl\|CDD\|234873	PRK00951, hisB, imidazoleglycerol-phosphate dehydratase HisB.	1.2667e-91

>NC_018618.1|WP_014895160.1|335882_336599_-|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase
MLIIPAIDLKNGKCVRLKQGRMYKTTDYGDPLKVVQRFVKIGIKRLHVIDLNGAVLGEPVNKYIINKLIKHYPNLILQIGGGIRNSATIKKYLDVGIKYVIIGTLAIKKPHRLYNLCKKFGKHIILSIDSYKGYVAIDGWKKIANIKSTELAKNVSNCGISSIIYTDISRDGMMQGLNLKKTIKLANFAKIPIIASGGLNNVFDIVNLKTNKNTFILGTIIGRAFYEGKIDLYKALLI
>NC_018618.1|WP_014895159.1|335079_335853_-|imidazole-glycerol-phosphate-synthase-subunit-HisF
MSLSKRIIPCLDIDCGKVVKGIKFENTRYAGDPLKIAKFYNEQKADEIALLDIKASYSGKNNTIEVVKKIANEIFIPLTVGGGIKTCKNIRELLNAGADKISINTAAVLNPKIVREASDKFGSQCIVVAIDAKRKTNKNIKEDWEVLTYGGRKNSGISAIDWACKMVKYGAGELLITSIDRDGTKRGFDINLIKTISQRVNVPIIASGGVGNLDHFVEGIKTGKADAVLAASIFHFGEYTIDKAKKYMAKKGISVRF
>NC_018618.1|WP_014895158.1|334024_335068_-|histidinol-phosphate-transaminase
MRMSYKINKLHPYTPGEQPYKKMIKLNTNENPYPPTPKINKLLKNFNYYKLRLYPDPTTSKLRKIIAKVYNVKSEQIFIGNGSDEVLALAFMTFFCQKLPLLMPTITYSFYPVYCKLYNIRYKTIPLQNKFEINLKKMNISNGGIIFANPNTPTGHAISYIEVNKLLDIHNEYVVLIDEAYIKFGSESAIPLIKKYKNLLIVNTLSKAYSLAGIRIGFAIGSTYLIKGLEKVKNSFNSYPIDVISELIAIEAIKDIKYLKKICNYIIYIRETLSKQLKDVGFTVLPSKANFMLVKPNNISAKTMFIKLRNHGILLRYFNNIKKYIRISIGTIQQMNYLIETIKYILK
>NC_018618.1|WP_014943285.1|333072_334017_-|homoserine-kinase
MAVFTKIKKQKLSLFLKSFNIKKQIKFKEVKQGTENSTFFIQTETKKFVLTLFEQGSYKDLTGFIDLLKFLYEHCLPIAMPLIDKNNIIIKKLSGKHALLFPKLYGIHPRTQNIEQCSIIGKTLGRLHSISNKFKLKKQNLRDINWIVLNYYKVISLLTKEDQELMFNQIYLLKHIVTNLPQGILHGDLFRDNTLFNGNNICGLIDFYNGCTGDLIFDLAILINDWCSDQHGNLLEDKYKAILNHYVLERPFTKEEVYILPKMLRLTALRYWISRLLVKNIFPVTHNLRHKEPKKYRDILVSHCKNQYPLYFKN
>NC_018618.1|WP_014895156.1|332055_333066_-|AI-2E-family-transporter
MNNYMLTRATVISLLIYFMGLLLIFPLHLLPCLLSGLFVFELVKAITPLLQTLIPVNKARLSSVVLLGASIVTILSLFFFTVISFILQDIKTPDNLIQRYMLIFDKARHQLPHSVVIYLPESADELSQIINELIYKHVNELQFVFGCAIHTCFSLLSGMILGAIIALQDIPDIKSLTPLTYALLQRSITLSNAFHNVVFAQLKISLVNTLLSSILLLICAPCLNVYIPLTKTLILITFIMGLIPLIGNLISNILIFIVSLSVSLWTAVIALTYLIAIHKLEYFLNARIIGLRINSNAWELLFAMLFFDAAFGFSGLIAAPMYYAYFKCELTNEKVI
>NC_018618.1|WP_014895155.1|326467_329017_+|DNA-mismatch-repair-protein-MutS
MKTKIKKNIYNATPAITQYLRIKNHYHKILLMYRMGDFYEFLFEDAHTASALLNIQLTSKGKYNNKRIPMAGIPCHSLRTYLKRIITAGISVAICEQIKTKKTKKSKLLERKVIRVITPGTLYEDSLLDESKDNLIISIIQKNNKWGISWLEFTTGAFGVLEVDNIHDLRLELDRLNPVELLISRLHKKLPKLPVHKSIIKPISDINFDYNNACKVLFKKLNIKNINKKLNAGVSAAGAIIQYINNNKIYNLAHINHLIFENKKDKLKIDRITKKHLELDVNVNGKQENTLFSVLNNTMTHMGSRLLKKWINNPITNYDLVFSRQKGVEIVLTNNFIDILQKYIKKIGDIERIVTRISLKTAKPLDLIKFKIALNVFPKLKTLLKGLLIVNKNSKSILNYIHKEIFTFPNIALLLDEALVDNPPNSFRYGYVIKSHFNKNLDKLRKIYTNSEKFIKTFENKEKLRTGIIKLKVTYNKLHGLFIEIPKGRKHKYKIPKNYIRTKTLKNSERFYTSELKYFEKRLIESKEKSIKYEKSIFKKLIKVLVGNIPYFIKTSKSLATLDVITTFAERALTLNYCKPIINKNKIGIKIMEGRHPVIESTTNHHFVPNNLFLNHNKSIHIITGPNMGGKSTFIRQIAIIVLLTYIGSYVPAKYAEIGPIDQIFTRIGGYDDLSAGKSTFMIEMHETAKILNTATFKSLVLMDEIGRGTNPTEGLCLAWACLERIIQIKALTLFSTHYFSLTQIAKKFKQITNLHFSASIKSNKVSYIYNIQKGATNNSYSSSVASLANIAQGVINKSNNLIKHFQDHQKSLNKRHTLMKYIKSFKYKDLTRYLKFIKSFFKNLKDMF
>NC_018618.1|WP_014943284.1|323400_324465_+|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase
MTHKSLFFNKAIDYLITNKDGLYIDCTLGLGGHSKQILNRLSINGLLIALDNDLNTKTLVKNLEFYLDKRFSFININFKYLEIIAKKKHLFGIVSGILLDLGISTYQIKDYKRGFSFFINGPLDMRINNTFGITACCLLNHYKFKQIFKIFKTYGEDEQLYRLTVEICNRRHHFPFKMTLELSNLIKTLKFTNYHIKHQLIKTKPKIQKTYIIHHKSIKIKQKFIKHSKSINTKHIIIKENTTKNKIIKTNNNNNSINKKKKKHIHPSTKIFQAIRSYINNEIQNLEIVIITSLKLLKTNKKLIIITFNSLESQIVNKVLKTTLNKVNKIYPSIEEVFYNNSSRCSAIFIIQKL
>NC_018618.1|WP_014895153.1|322631_323015_+|30S-ribosomal-protein-S9
MYFYGTGRRKTASARVFLKIGNGKFIINNNTLKKYFHNINLYYLMIQPLELTNNVNTFNIKITVNGGGVKSQAEAIRHGISRALVAYNNNLRYKLRLNGYLKRDSREVERKKIGFKKARKSPQFSKR
>NC_018618.1|WP_014895152.1|322176_322605_+|50S-ribosomal-protein-L13
MKTLNVKINDLKTEWYIINAYNKKLGRLSTKIVHFLLGKNKVIYNSYLNIGDNIIVINADQIKITGNKLIQKKYYYHTGYPGGLRKTTLLELMKKNPEKVIKQSVKGMLPKNSLGRLISKKLKIYKGKQHPHISQQPLELLI
>NC_018618.1|WP_014895151.1|321534_322161_+|ATP-phosphoribosyltransferase
MIEPLVIALSKGRILFKSLSLLKKAGIIPIESVENNRKLLFNTKKKYLNLIILRAIDVPTYVKLGAADMGIVGKDVLLENGSKGLYEPIDFKISKCRLMTAGLIGFNVKNTTRKVATKFVNIAKRYYASKGIKANIIKLYGAMELAPIMNLAEEIIDIVDTGNTLKENGMEPKTLIKNISTRLIVNKTSMIIKYKSINPLIELLISII
>NC_018618.1|WP_014895162.1|338803_339424_-|imidazole-glycerol-phosphate-synthase-subunit-HisH
MAIIIIDYGIGNLYSVANAIKKVTKEKVYITNDAKKIKLSNRIILPGQGAIKDCIKELKKKELYWLLKEIINTTNKPVLGICIGQHLLMESSEENKGVFGINYIKGIVKNYKNKNFKIPHTGWNIVYKHKEHQIWNGIKSGSRFYFVHSFYVKTRFKNNVLGVTEYGGKCANVITYYNSVITVQFHPEKSSSLGLKFLKNFINWLP
>NC_018618.1|WP_014895163.1|339435_340023_-|imidazoleglycerol-phosphate-dehydratase-HisB
MSVNKKKKYRTANIYRETKETKIRVYVNLDGQGKINIKCGIELLEHMLDQITNNGQIDLTIKTNVYSHIDHHHTIEDIGIAMGKAFKKALGKKIGIKRYGCSYVPMDESLSRVVIDLSGRPSLHMTKVGKFDLFREFFKGWVNNCKSTLHIDILKGFNSHHQIESIFKSFGISIRKAITKDKRITNKLYSTKGTL
>NC_018618.1|WP_014943286.1|340935_341865_+|RluA-family-pseudouridine-synthase
MKTIKCLLSIRKGLRLDKTSRKLFYITREKIKTFIKKKIRLDGFTVKQNIFLNKFKWISLIHYTKLYIVERVFEPDYFYKNYENNEILVINKRFGLVVHPSKSNIKGTLVNAILSYKKTDFINLPRAGLVHRIDKDTSGLVIIAKNLVSYRDLKTKIKEKSIIREYDVVVLGQLDIGGYINSQIGRNIKYRKKKNIVNDEGKIAITHFRVLERFNTHTYLRCWLETGRTHQIRVHMQSISRAVIGDELYLNNKILPNLNIRQALHAHCLILKHPSKQIYIKLLAKLPKDMTLLLALLRTNKIHTISHTL
>NC_018618.1|WP_014943287.1|342228_342873_-|MarC-family-NAAT-transporter
MFIEYIHSVLFFLLTLLPVANPIASTTLLLTLGNKIKAKERKKQIYFATLYVGIIILVCFYAGKNILNAFGVSINALRLAGGIILLYFGFDLLFNVTEKKQITEKNHLQQSHLNISFVPLALPGTAGPGTIALIISSSSSLPSSCLIHFVIWSVTALFTLMFLICLLSANKIFKRIGPSGIDAISRIMGFILISMGVQFIITGFQNMLIVLFHL
>NC_018618.1|WP_014943288.1|345011_346754_+|biosynthetic-type-acetolactate-synthase-large-subunit
MELLSGADMIIRFLKDENVKYVYGYPGGAALHIYDALFRQKVVKHILVRHEQAATHMADGYARASVKPGVVLVTSGPGATNAVTGIATAYMDSIPMVILCGQVVSKLIGEDAFQETDIVGVTRPIVKHSFTIRDTADIPTILKKAFYIASTGRLGPVLVDIPKDMTAPNELYEYIKQNDIKLREKKKNVCNNKEFIKKALKLLLKAKKPVLFVGGGAITGKASHKIREFANIAYLPVVTSLMGIGAYPQSDFQYIGWPGMHGSYEANNAMHNSDLIFCVGARFDDRVTNNTEKFCPNAKVIHVDIDPCSISKTILADIPIIGSAKKVVKELLSKINKSYKDEINLENRKKHLEIWWKCINKWIKNRDGKLYKPVTALSRDLIKPQQVIEAVYKKTKGEAIIATDVGQHQMFAAQYYKFNKPNKLITSGGLGTMGFGLPAAMGVKLSYPHENVVLITGEGSFQMMMQELSTCKQFDISLKIIHLNNGSLGMVRQWQDINYKARHANSYVESLPEFHRLFEAYGLNAITVKVIEELESALETVFINKNELVFLNIYIDPLEHVYPMQKPLGAINDMIISKAE
>NC_018618.1|WP_014895167.1|346760_347252_+|acetolactate-synthase-small-subunit
MRHIISILLENEPGALSKIVGVFSQRNFNIETLNVAHTEDITLSRLTLTTNGDACVIEQIIKQLNKLVDVVKILDLTEVSHIARELMLVKVKAEADDRRAEIKRITDIFRANIVDVTTTDYIIQITGDEDKLDAFINALKGINEVVRTGVSGIPRVWVKVKLS
>NC_018618.1|WP_014943289.1|347273_348290_+|ketol-acid-reductoisomerase
MKIYYEKDCNRSLIKQKRVVVIGYGSQGHAHANNLKDSGVNIKVALYKGSRSWKKAEVAGLKVEVIEKAIIDADIVVMLVPDELQKNIYYRYVENNIKSGAVLIFAHGFNVHYQQIEPRQDIDVVLVAPKAPGHTVRTTYMQGGGVPSLIAIYKDNSGKAKDIALSYASAIGCGKTGIIQTTFKEETETDLFGEQAVLCGGVSALITAGFEVLVEAGYSAEMAYFECLHELKLIVDLIYEGGLGDMRYSISNTAEYGDYVSGHKIINNDTKKNMKTLLENIQNGKFAKDFIIEKKTGFTLLKTKRRINSEHKIEKVGKVLRSMMPLICKNKIIDKNKN
>NC_018618.1|WP_014895169.1|348309_348558_+|30S-ribosomal-protein-S16
MVKIRMTRCGCKNRPFYQINVKDSRSSRDGKFIEKIGYYNPLVISEKRFCINSSRLGYWKNKGAKISNRVLSLLKKNKKDKK
>NC_018618.1|WP_014943290.1|348566_348875_+|16S-rRNA-processing-protein-RimM
MGSIAKSYGVKGWIKVNSYTNQRCNIIDYSRLWILEIKGKNIYLKVKRIRLVHRFFIVQLYGIKTCEKAKTLIGSLIKLQKKLLPNLQKGEYYLYQFKNLRV
>NC_018618.1|WP_014895171.1|349063_349417_+|50S-ribosomal-protein-L19
MSINQLIQAIELEQMKTKIIPKFMTGDTVIVQIKVLEGSIERLQAFEGLVIGKRNRGLNSSFTVRKVTSGIGIERTFKTYSTCIFSIKINRKGKVRKSKLYYLRDLKGKSARINNIS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_018618_1	1.1\|133364\|32\|NC_018618\|CRISPRCasFinder	133364-133395	32	NZ_KU295134	Escherichia coli strain BK32602 plasmid pBK32602, complete sequence	40502-40533	7	0.781
NC_018618_1	1.1\|133364\|32\|NC_018618\|CRISPRCasFinder	133364-133395	32	NZ_CP020059	Escherichia coli strain AR_0061 plasmid unitig_1, complete sequence	24278-24309	7	0.781

1. spacer 1.1|133364|32|NC_018618|CRISPRCasFinder matches to NZ_KU295134 (Escherichia coli strain BK32602 plasmid pBK32602, complete sequence) position: , mismatch: 7, identity: 0.781

-aacatcacctcttaaatcttaaaagcaacctt	CRISPR spacer
tcacatt-ccttttaaatattaaaagcaaccca	Protospacer
  ****. ***.****** ************.

2. spacer 1.1|133364|32|NC_018618|CRISPRCasFinder matches to NZ_CP020059 (Escherichia coli strain AR_0061 plasmid unitig_1, complete sequence) position: , mismatch: 7, identity: 0.781

-aacatcacctcttaaatcttaaaagcaacctt	CRISPR spacer
tcacatt-ccttttaaatattaaaagcaaccca	Protospacer
  ****. ***.****** ************.

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage