CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_018646	Streptococcus agalactiae GD201008-001, complete sequence	1 crisprs	RT,cas3,DinG,cas9,cas1,cas2,csn2,csm6,DEDDh,WYL	1	7	4	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_018646_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018646_1

941238-941868

TypeII

II-A

Consensus_repeat	Method
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CRISPRCasFinder
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CRT

9 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NC_018646_1

>merge|NC_018646|1|941238-941868|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACACGAGTAAATGGTTTCATCGCACGACTTACGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAATGCGTTCATTTTGTAAGAAATCTATCAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATGTTGTAGAATCATATCGACCATATAACCGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACGCTTGGTCTCGAAGAATTACAGAAGAACATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCAATTGATTGCCGTTAAAACCGATAGAGGAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAGTGCCACAGTTTGTGGCTGATTGGATTGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCATTCAAGGACTACCCTCAACAGTAACTCTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTCTTCTTTTTAATTCTTCTAACACTCCATCGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATCTTCTTTTGACCTAACAAAAGGATATGTGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCA

>NC_018646|1|1|941238-941802|PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACGAGTAAATGGTTTCATCGCACGACTTACG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AATGCGTTCATTTTGTAAGAAATCTATCAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATGTTGTAGAATCATATCGACCATATAACC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GCTTGGTCTCGAAGAATTACAGAAGAACAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CAATTGATTGCCGTTAAAACCGATAGAGGA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAGTGCCACAGTTTGTGGCTGATTGGATTG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CATTCAAGGACTACCCTCAACAGTAACTCT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCTTCTTTTTAATTCTTCTAACACTCCATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

>NC_018646|1|1|941238-941802|CRISPRCasFinder
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACGAGTAAATGGTTTCATCGCACGACTTACG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AATGCGTTCATTTTGTAAGAAATCTATCAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATGTTGTAGAATCATATCGACCATATAACC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GCTTGGTCTCGAAGAATTACAGAAGAACAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CAATTGATTGCCGTTAAAACCGATAGAGGA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAGTGCCACAGTTTGTGGCTGATTGGATTG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CATTCAAGGACTACCCTCAACAGTAACTCT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCTTCTTTTTAATTCTTCTAACACTCCATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

>NC_018646|1|1|941238-941868|CRT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACGAGTAAATGGTTTCATCGCACGACTTACG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AATGCGTTCATTTTGTAAGAAATCTATCAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATGTTGTAGAATCATATCGACCATATAACC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GCTTGGTCTCGAAGAATTACAGAAGAACAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CAATTGATTGCCGTTAAAACCGATAGAGGA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAGTGCCACAGTTTGTGGCTGATTGGATTG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CATTCAAGGACTACCCTCAACAGTAACTCT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCTTCTTTTTAATTCTTCTAACACTCCATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATCTTCTTTTGACCTAACAAAAGGATATGT
GTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCA

Protein	Signature genes	Signature genes Name	Protein_function
NC_018646.1\|WP_000438314.1\|942425_942842_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NC_018646.1\|WP_029687116.1\|945070_947689_+\|pneumococcal-type-histidine-triad-protein	unknown	unknown	gnl\|CDD\|275380
NC_018646.1\|WP_000665410.1\|948920_949355_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NC_018646.1\|WP_000929489.1\|939277_940147_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NC_018646.1\|WP_000146566.1\|953522_954161_-\|CatB-related-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100040
NC_018646.1\|WP_001019133.1\|942977_944810_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NC_018646.1\|WP_000168898.1\|949506_952299_+\|cation-transporting-P-type-ATPase	unknown	unknown	gnl\|CDD\|223550
NC_018646.1\|WP_000122194.1\|940143_940485_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NC_018646.1\|WP_000653360.1\|934119_934776_+\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NC_018646.1\|WP_001241816.1\|931015_931396_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131381
NC_018646.1\|WP_000914664.1\|931487_932618_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NC_018646.1\|WP_000590706.1\|940471_941137_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	pfam09711_csn2_CAS-II-A	gnl\|CDD\|213408
NC_018646.1\|WP_000159234.1\|930619_930991_+\|YbgA-family-protein	unknown	unknown	gnl\|CDD\|377982
NC_018646.1\|WP_001056394.1\|954871_955483_+\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NC_018646.1\|WP_000323544.1\|933359_934130_+\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NC_018646.1\|WP_000523795.1\|932621_933359_+\|acyl-ACP-thioesterase	unknown	unknown	gnl\|CDD\|366738
NC_018646.1\|WP_000621142.1\|948456_948921_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_018646.1\|WP_000065321.1\|952298_953402_+\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412
NC_018646.1\|WP_001040087.1\|935163_939276_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|273840
NC_018646.1\|WP_000180007.1\|947788_948448_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336

Protein	Function_ID	Function_description	E-value
NC_018646.1\|WP_000438314.1\|942425_942842_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	4.64422e-78
NC_018646.1\|WP_029687116.1\|945070_947689_+\|pneumococcal-type-histidine-triad-protein	gnl\|CDD\|275380	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	1.31301e-21
NC_018646.1\|WP_000665410.1\|948920_949355_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	6.40832e-86
NC_018646.1\|WP_000929489.1\|939277_940147_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.54315e-139
NC_018646.1\|WP_000146566.1\|953522_954161_-\|CatB-related-O-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	9.50556e-71
NC_018646.1\|WP_001019133.1\|942977_944810_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NC_018646.1\|WP_000168898.1\|949506_952299_+\|cation-transporting-P-type-ATPase	gnl\|CDD\|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NC_018646.1\|WP_000122194.1\|940143_940485_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.38084e-52
NC_018646.1\|WP_000653360.1\|934119_934776_+\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	8.67363e-51
NC_018646.1\|WP_001241816.1\|931015_931396_+\|hypothetical-protein	gnl\|CDD\|131381	TIGR02328, TIGR02328, conserved hypothetical protein. Members of this protein are found in a small number of taxonomically well separated species, yet are strongly conserved, suggesting lateral gene transfer. Members are found in Treponema denticola, Clostridium acetobutylicum, and several of the Firmicutes. The function of this protein is unknown. [Hypothetical proteins, Conserved].	6.45558e-80
NC_018646.1\|WP_000914664.1\|931487_932618_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NC_018646.1\|WP_000590706.1\|940471_941137_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	3.61399e-122
NC_018646.1\|WP_000159234.1\|930619_930991_+\|YbgA-family-protein	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	6.08694e-28
NC_018646.1\|WP_001056394.1\|954871_955483_+\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	6.1265e-31
NC_018646.1\|WP_000323544.1\|933359_934130_+\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.19143e-132
NC_018646.1\|WP_000523795.1\|932621_933359_+\|acyl-ACP-thioesterase	gnl\|CDD\|366738	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase. This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.	3.68196e-111
NC_018646.1\|WP_000621142.1\|948456_948921_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.91796e-19
NC_018646.1\|WP_000065321.1\|952298_953402_+\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	1.82724e-105
NC_018646.1\|WP_001040087.1\|935163_939276_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|273840	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.	0
NC_018646.1\|WP_000180007.1\|947788_948448_+\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	2.66997e-33

>NC_018646.1|WP_000590706.1|940471_941137_+|type-II-A-CRISPR-associated-protein-Csn2
MIKINFPILDEPLVLSNATILTIEDVSVYSSLVKHFYQYDVDEHLKLFDDKQKSLKATELMLVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLENELDLEYDEITILELIKALGVKIETQSDTIFEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVLFLEPRRLYDLPQYVIDKDYFLIGENMV
>NC_018646.1|WP_000122194.1|940143_940485_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTETAEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNTANNAMIGRLKVNNPKKGNITLLTVTEKQFARMVYLHGERNTSVANSDSRLVFLGDSYDQD
>NC_018646.1|WP_000929489.1|939277_940147_+|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDSYQTEMIHLSEIDILIMETTDIVLSTMLIKRLVDENILVIFCDDKRLPTAMLMPYYARHDSSLQLSRQMSWIEDVKADVWTSIIAQKILNQSFYLGECSFFEKSQSIMNLYHDLEPFDPSNREGHAARIYFNTLFGNDFSREQDNPINAGLDYGYSLLLSMFAREVVKCGCMTQFGLKHANQFNQFNLASDIMEPFRPIVDRIIYENRQSDFVKMKRELFSMFSETYSYNGKEMYLSNIVSDYTKKVIKSLNSDGNGIPEFRI
>NC_018646.1|WP_001040087.1|935163_939276_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MNKPYSIGLDIGTNSVGWSIITDDYKVPAKKMRVLGNTDKEYIKKNLIGALLFDGGNTAADRRLKRTARRRYTRRRNRILYLQEIFAEEMSKVDDSFFHRLEDSFLVEEDKRGSKYPIFATLQEEKDYHEKFSTIYHLRKELADKKEKADLRLIYIALAHIIKFRGHFLIEDDSFDVRNTDISKQYQDFLEIFNTTFENNDLLSQNVDVEAILTDKISKSAKKDRILAQYPNQKSTGIFAEFLKLIVGNQADFKKYFNLEDKTPLQFAKDSYDEDLENLLGQIGDEFADLFSAAKKLYDSVLLSGILTVIDLSTKAPLSASMIQRYDEHREDLKQLKQFVKASLPEKYQEIFADSSKDGYAGYIEGKTNQEAFYKYLSKLLTKQEDSENFLEKIKNEDFLRKQRTFDNGSIPHQVHLTELKAIIRRQSEYYPFLKENQDRIEKILTFRIPYYIGPLAREKSDFAWMTRKTDDSIRPWNFEDLVDKEKSAEAFIHRMTNNDFYLPEEKVLPKHSLIYEKFTVYNELTKVRYKNEQGETYFFDSNIKQEIFDGVFKEHRKVSKKKLLDFLAKEYEEFRIVDVIGLDKENKAFNASLGTYHDLEKILDKDFLDNPDNESILEDIVQTLTLFEDREMIKKRLENYKDLFTESQLKKLYRRHYTGWGRLSAKLINGIRDKESQKTILDYLIDDGRSNRNFMQLINDDGLSFKSIISKAQAGSHSDNLKEVVGELAGSPAIKKGILQSLKIVDELVKVMGYEPEQIVVEMARENQTTNQGRRNSRQRYKLLDDGVKNLASDLNGNILKEYPTDNQALQNERLFLYYLQNGRDMYTGEALDIDNLSQYDIDHIIPQAFIKDDSIDNRVLVSSAKNRGKSDDVPSLEIVKDCKVFWKKLLDAKLMSQRKYDNLTKAERGGLTSDDKARFIQRQLVETRQITKHVARILDERFNNELDSKGRRIRKVKIVTLKSNLVSNFRKEFGFYKIREVNNYHHAHDAYLNAVVAKAILTKYPQLEPEFVYGDYPKYNSYKTRKSATEKLFFYSNIMNFFKTKVTLADGTVVVKDDIEVNNDTGEIVWDKKKHFATVRKVLSYPQNNIVKKTEIQTGGFSKESILAHGNSDKLIPRKTKDIYLDPKKYGGFDSPIVAYSVLVVADIKKGKAQKLKTVTELLGITIMERSRFEKNPSAFLESKGYLNIRADKLIILPKYSLFELENGRRRLLASAGELQKGNELALPTQFMKFLYLASRYNESKGKPEEIEKKQEFVNQHVSYFDDILQLINDFSKRVILADANLEKINKLYQDNKENISVDELANNIINLFTFTSLGAPAAFKFFDKIVDRKRYTSTKEVLNSTLIHQSITGLYETRIDLGKLGED
>NC_018646.1|WP_000653360.1|934119_934776_+|TIGR01906-family-membrane-protein
MKDKLLVVLTWIWIISLATLATIYIAWLIYPIEIQFLKLEKVVYLKAETIYYNFNKLMIYLTHPFISDLNMPSFPSSEDGLKHFADVKYLFTLAHGLFVILTFPVIYFLRSGWKQKSIFLYEGFFKIAIMLPIFIVVCAFLLGFDQFFTLFHEVLFPGDSTWQFNPLTDPVIWILPETFFLHCFIIFLLIYETITIILLIIGRKHLKLRKYKNKMQAL
>NC_018646.1|WP_000323544.1|933359_934130_+|TIGR01457-family-HAD-type-hydrolase
MAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDYMNDMNRGKTAYVIGEEGLKKAIADAGYVEDTKNPAYVVVGLDWNVTYDKLATATLAIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTFNEG
>NC_018646.1|WP_000523795.1|932621_933359_+|acyl-ACP-thioesterase
MGLLYRETYEVPFYESDTNHYMKLPQLLALALQISAKQSLKLGIGDDIVFKRYGLVWVVTDYIIDIERLPKHAEKIVIETEAKAHNKLLCYRYFYIYGEDGQKIITISSAFVLMDFKTRKIHPVLDDITSIYQSQRIKKVIRGPKYHPIGDSKVKQYHVRYFDLDMNGHVNNSKYLEWMYDVLDLDFLSSHIPKKIDLKYIKEIQYGTDIKSHWYQDGLVTRHDIIGGDAIHAQARIEWQEKKED
>NC_018646.1|WP_000914664.1|931487_932618_+|oxygen-independent-coproporphyrinogen-III-oxidase
MLKKPTSAYVHIPFCTQICYYCDFSKVFIKNQPVDAYLQALIREFRSYDITELRTLYIGGGTPTSISAVQLDYLLTELSRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSLGVQTFNDKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKALSLNIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEISNFTKPGFESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPIQHYLKGVSEGNARLSEEVLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKENNGFIQMTKKGLFLGDTVAEKFIVE
>NC_018646.1|WP_001241816.1|931015_931396_+|hypothetical-protein
MRLWHQDIIELLPRQQLLGQHRECCALRGNGWGRKHETVDYVFRYSPYRLFAYHQLVMEEMMERGYRVSKEWLIAEYRGMKCPRYDTLNPVDLETPIYPEHNQDYLQECLWNLKAKGIDLPINKIK
>NC_018646.1|WP_000159234.1|930619_930991_+|YbgA-family-protein
MTKEAELLWAKHKYLVLSKSQKIYLDIRQTLKSPNCTVLDVQSLIDQAVLLEESPSQVTNAYMHIWGYFKNKAERQEKEEFLTLLEKYRKTGYQRRKLLAFLKQLLAKYPNSYLQNSSIFEEE
>NC_018646.1|WP_000438314.1|942425_942842_+|nucleoside-diphosphate-kinase
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRYADADILKRHYAELTDRPFFPTLVDYMTSGPVIIGVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
>NC_018646.1|WP_001019133.1|942977_944810_+|elongation-factor-4
MNIEDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRAEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGEVDAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYIAASIKTVADTRVGDTITLANNPAIEPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVNTTDGEMLEVSNPSEFPDPTRVDSIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKLIVDKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDDKK
>NC_018646.1|WP_029687116.1|945070_947689_+|pneumococcal-type-histidine-triad-protein
MIALAGLVLSCHFALTACHTQEHKNSHHIKTKQVAKKKANKKKVSVKESHKKRKGVAGVDFPTDDGFLLTKDSKILSHTDSGIVVAHGNHSHFIFYSDLKGSKFSYLIPNANTKTNKNQAVRNFKAGAVAVNTLNDGYVFNPADIVSEDANGYVVRHGDHFHYIPKASLSQQKQVQASRAVSRLGNQSNSHYRVNSSKIAGLHYPTSNGFLFNGRGIKGTTPTGILVEHHNHLHFISFADLRKGGWGSIADRYQPQKKADSKKQSPSSKKPRTENTLPKDIKDKLAYLARELHLDISRIRVLKTLNGEIGFEYPHDDHTHVIMAKDIDLSKPIPNPHHDDEDHHKGHHHDESDHKHEEHEHTKSNKLSDEDQKKLIYLAEKLGLNPNQIEVLTSEDGSIIFKYPHDDHSHTIASKDIEIGKPIPDGHHDHSHAKDKVGMATLKQIGFDDEIIQDILHADAPTPFPSNETNPEKMRQWLATVTKINIGQRTNPFQRFGLSLMPNIEVLGIGFTPINDMTPVLQFKKLKQLWMTNTGITDYSFLDKMPLLEGLDISQNGIKDLSFLTKYKQLSLIAAANNGITSLKPLAELPNLQFLVLSHNNISDLTPLSNLTKLQELHLDHNNVKNLSALSGKKDLKVLDLSNNKSADLSTLKTTSLETLLLNETNTSNLSFLKQNPKVSNLTINNVKLASLDGIEESDEIVKVEAEGNQIKSLVLKNKQGLLKFLNVTNNQLTSLEGVNNYTSLETLSVSKNKLESLDIKTPNKTVTNLDFSHNNVPTSQLKLNEKNIPEAVAKNFPAVVEGSMVGNGSLAEKAAMASKEDKQVSDNTNHQKNTEKSAQANADSKKENPKTHDEHHDHEETDHAHVGHHHH
>NC_018646.1|WP_000180007.1|947788_948448_+|HD-domain-containing-protein
MTMVKREDVILNATENMVHHKLKNDPSGHDWFHIVRVRNLAVELAHKEGANTFICQMAALLHDIIDDKICQDSKQASYELTQWLYSQDLAIAEVEHILDILENISFKAGTGLTMKTLEGQIVQDADRLDAMGAIGIARTMAYSGSKGRLIHDPNLKPRENLTLEEYRNGQDTAIMHFYEKLLKLKDLMNTKQGKMLAQKRHDFLELYLAEFYAEWNGKR
>NC_018646.1|WP_000621142.1|948456_948921_+|GNAT-family-N-acetyltransferase
MIRRAKEKDLPDIAELLKQILMLHHEVRPDIFHTRGSKFSKEQLKEMLIDESKPIFVYESDEGKVVAHLFLQLQEKRDLPRKSFKTLYIDDLCIDEEVRGQQIGQKLMDFARQYAKKHGCYNITLNVWNDNQRAVSFYEKLGFKPQQTQMEEIL
>NC_018646.1|WP_000665410.1|948920_949355_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MKETQEELRQRIGHTAYQVTQNSATEHAFTGKYDDFFEEGIYVDIVSGEVLFSSLDKFQSGCGWPAFSKPIENRMVTNHQDHSHGMHRIEVRSRQADSHLGHVFNDGPVDAGGLRYCINSAALDFIPYDQMAKRGYGDYLSLFD
>NC_018646.1|WP_000168898.1|949506_952299_+|cation-transporting-P-type-ATPase
MASTNNVSDTNTRFAKEELEEVFEELGTTQGGLSDEEVAVRQKKYGLNLLSEVKQESIILLFLKNFTSLMAILLWVGGFVAIVSNSLELGLAIWMVNVINGIFSFIQEYRASQATQALEKMLPSYSRVLRKGSEEKILSEQLVPGDIVLIEEGDRISADGRLIKTTDLQVNQSALTGESNPIYKDSNVENDQSKTLIECDNMVFAGTTVSSGSATMVVTAIGMQTQFGQIADLTQGMKSEKSPLQRELDRLTKQISIISITVGIIFFLAATFFVKEPVSKSFIFALGMIVAFIPEGLLPTVTLSLAMAVQRMAKEHALVKKLSSVETLGATSVICSDKTGTLTQNEMTVNHLWQNGKSYQVTGLGYAPEGQILFEGDNICFGNSDRGDLEKLIRFAHLCSNAQVLPPNDDRSTYTVLGDPTEACLNVLLEKSGINIQENRKFAPRLKELPFDSVRKRMTTIHSLGGDEKDKKISITKGAPKEILDLSDYVLSDGKVIPLNKEERNKIQLANDTFAKDGLRVLAVSYCDIEGFSKEQWTQENLEQHMVFIGLIAMSDPPREGVREAIDKCHAASIRIIMVTGDYGLTALSIAKNIGIIRNDDAKVISGLELSEMTDSQLKKELSGEVVFARVAPEQKYRVVTILQEMGEVVAVTGDGVNDAPALKKSDIGVAMGVTGTDVAKESADMILTDDHFASIVHAVEEGRAVYQNIKKFLTYIFNSNTPEAVPSAFFLFSKGFIPLPLTVMQILAVDLGTDMLPALGLGVEPPETDVMNRPPRRLTDRLLDKGLLIKSFLWYGTIESVLAMGGFFWAHYLRYGNFTFFVANGIPYREATTMTLGAIIFSQIGMVMNSRTSYQSIKALSIFGNKLINFGIIMEILAFLVLVYVPLFHNLFNTASLGLSHWLYLISCPFIMIGLDEVRKLFSSRKNKR
>NC_018646.1|WP_000065321.1|952298_953402_+|DUF2974-domain-containing-protein
MSNIITYLKNNSNLTFDELALNDVDILCLNEFGYISFEKLINTTEMKSVLVCELYHEYLQTMAKSYSFMFTSQRHDLCQLMMTSKRFKNLTLSYYRAEISLEFEKQFAAMVFTIPNINYHQVVFRGTDANLIGWKEDFKLTYMREISAHRSAIKYLNTILPYFDKVVLSGHSKGGNLALYAAMFTKPDLKAKIDLIWLIDSPGLQKTLLPTTEYKTTKQKCIRLLPEESIVGMMLYSDIEPLIISSNARGILQHDVTTWEIQEPAILKTGTGLSLKSICFEKTFQQWMAELKSQERKLFFDLLFDSFLSSGVSSLDDFNLASRAKMMKAFHSFRELDDDKKRLFNKSLKLLVTIFWGAYHDNSRETK
>NC_018646.1|WP_000146566.1|953522_954161_-|CatB-related-O-acetyltransferase
MASILKKHLEKRLELKNDPMRTDMSTGASYPKYGFSVGKYTYGYQQFFYEGVNLKEIGAFCSIAQNVTITGLNHPTDHITTNPFIYYKSRGFINEDRADLIDEKKNGKVIIGNDVWIGTNVTILPSVTIGNGAIIGAGSVITKDIPDYGVVAGTPAKIIKYRFSEEEITLLNASQWWNWSDEAIKEHISEFSDKKEFFNTLKSISENKNHKL
>NC_018646.1|WP_001056394.1|954871_955483_+|TVP38/TMEM64-family-protein
MNMKLSKRYRFWQKVIKALGVLALIATLVLVVYLYKLGILNDSNELKDLVHKYEFWGPMIFIVAQIVQIVFPVIPGGVTTVAGFLIFGPTLGFIYNYIGIIIGSVILFWLVKFYGRKFVLLFMDQKTFDKYESKLETSGYEKFFIFCMASPISPADIMVMITGLSNMSIKRFVTIIMITKPISIIGYSYLWIYGGDILKNFLN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_018646_1	1.2\|941341\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941341-941370	30	NC_018646.1	1799312-1799341	0	1.0

1. spacer 1.2|941341|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to position: 1799312-1799341, mismatch: 0, identity: 1.0

aatgcgttcattttgtaagaaatctatcaa	CRISPR spacer
aatgcgttcattttgtaagaaatctatcaa	Protospacer
******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_018646_1	1.5\|941539\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941539-941568	30	JX409894	Streptococcus phage LYGO9, complete genome	12056-12085	0	1.0
NC_018646_1	1.5\|941539\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941539-941568	30	MK448956	Streptococcus phage Javan48, complete genome	35058-35087	0	1.0
NC_018646_1	1.5\|941539\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941539-941568	30	MK448749	Streptococcus phage Javan39, complete genome	36640-36669	0	1.0
NC_018646_1	1.5\|941539\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941539-941568	30	JX409895	Streptococcus phage JX01, complete genome	23903-23932	0	1.0
NC_018646_1	1.5\|941539\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941539-941568	30	MH853356	Streptococcus phage LF2, partial genome	26338-26367	0	1.0
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448956	Streptococcus phage Javan48, complete genome	13968-13997	0	1.0
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448749	Streptococcus phage Javan39, complete genome	13968-13997	0	1.0
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	MK448790	Streptococcus phage Javan515, complete genome	1426-1455	0	1.0
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	MK448957	Streptococcus phage Javan484, complete genome	1422-1451	0	1.0
NC_018646_1	1.5\|941539\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941539-941568	30	MK448971	Streptococcus phage Javan52, complete genome	37042-37071	1	0.967
NC_018646_1	1.5\|941539\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941539-941568	30	MK448829	Streptococcus phage Javan7, complete genome	31735-31764	1	0.967
NC_018646_1	1.5\|941539\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941539-941568	30	MH853355	Streptococcus phage LF1, complete genome	22592-22621	1	0.967
NC_018646_1	1.5\|941539\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941539-941568	30	MH853358	Streptococcus phage LF4, complete genome	22592-22621	1	0.967
NC_018646_1	1.5\|941539\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941539-941568	30	MK448837	Streptococcus phage Javan10, complete genome	30270-30299	2	0.933
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448704	Streptococcus phage Javan213, complete genome	11298-11327	2	0.933
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448734	Streptococcus phage Javan347, complete genome	8977-9006	2	0.933
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448876	Streptococcus phage Javan214, complete genome	11800-11829	2	0.933
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	HG424323	Streptococcus phage 20617 complete prophage genome	40561-40590	2	0.933
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448796	Streptococcus phage Javan53, complete genome	17381-17410	3	0.9
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448822	Streptococcus phage Javan629, complete genome	13388-13417	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MH892366	Streptococcus phage SW18, complete genome	22497-22526	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MH937501	Streptococcus phage CHPC1073, complete genome	20886-20915	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MH973662	Streptococcus phage SW7, complete genome	22351-22380	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MH892373	Streptococcus phage SW27, complete genome	19539-19568	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	KY705256	Streptococcus phage P3681, complete genome	23190-23219	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MF161328	Streptococcus phage D4276, complete genome	21671-21700	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	KX879643	Streptococcus phage CHPC1151, complete genome	20070-20099	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MH937458	Streptococcus phage CHPC572, complete genome	22116-22145	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MH892363	Streptococcus phage SW14, complete genome	23138-23167	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	KY705252	Streptococcus phage P0092, complete genome	19588-19617	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MH937506	Streptococcus phage CHPC1148, complete genome	21012-21041	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MH937486	Streptococcus phage CHPC1027, complete genome	21636-21665	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MH937471	Streptococcus phage CHPC927, complete genome	23002-23031	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	KY705282	Streptococcus phage P8921, complete genome	22072-22101	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	KY705253	Streptococcus phage P0093, complete genome	19588-19617	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	KY705287	Streptococcus phage P9854, complete genome	23623-23652	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MH892367	Streptococcus phage SW19, complete genome	20151-20180	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MH892355	Streptococcus phage SW4, complete genome	19443-19472	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	KY705263	Streptococcus phage P7133, complete genome	21137-21166	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MH937467	Streptococcus phage CHPC877, complete genome	22120-22149	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	KY705254	Streptococcus phage P0094, complete genome	19588-19617	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	KY705264	Streptococcus phage P7134, complete genome	20896-20925	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	KY705260	Streptococcus phage P5651, complete genome	21779-21808	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	KY705284	Streptococcus phage P9851, complete genome	22500-22529	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MH973663	Streptococcus phage SW24, complete genome	19662-19691	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	KY705272	Streptococcus phage P7601, complete genome	22668-22697	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MH937488	Streptococcus phage CHPC1033, complete genome	22921-22950	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	KY705271	Streptococcus phage P7574, complete genome	21221-21250	3	0.9
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	KY705265	Streptococcus phage P7151, complete genome	22501-22530	3	0.9
NC_018646_1	1.4\|941473\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941473-941502	30	NZ_CP054046	Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence	34378-34407	4	0.867
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448736	Streptococcus phage Javan35, complete genome	13064-13093	4	0.867
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448781	Streptococcus phage Javan5, complete genome	15086-15115	4	0.867
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448938	Streptococcus phage Javan44, complete genome	13065-13094	4	0.867
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	HG424323	Streptococcus phage 20617 complete prophage genome	15101-15130	4	0.867
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448911	Streptococcus phage Javan34, complete genome	13064-13093	4	0.867
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448916	Streptococcus phage Javan36, complete genome	13064-13093	4	0.867
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448755	Streptococcus phage Javan423, complete genome	12783-12812	4	0.867
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448756	Streptococcus phage Javan425, complete genome	12783-12812	4	0.867
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448707	Streptococcus phage Javan227, complete genome	16383-16412	4	0.867
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448954	Streptococcus phage Javan476, complete genome	12435-12464	4	0.867
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK449012	Streptococcus phage Javan94, complete genome	12477-12506	4	0.867
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448680	Streptococcus phage Javan139, complete genome	10668-10697	4	0.867
NC_018646_1	1.4\|941473\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941473-941502	30	NC_014838	Pantoea sp. At-9b plasmid pPAT9B01, complete sequence	534446-534475	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	NC_000872	Streptococcus phage Sfi21, complete genome	36726-36755	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	KY705251	Streptococcus phage P0091, complete genome	31406-31435	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	KY705273	Streptococcus phage P7602, complete genome	33980-34009	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MH937473	Streptococcus phage CHPC929, complete genome	35982-36011	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MH892360	Streptococcus phage SW11, complete genome	33275-33304	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MH892353	Streptococcus phage SW2, complete genome	34246-34275	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	KY705277	Streptococcus phage P7951, complete genome	31360-31389	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	NC_000871	Streptococcus phage Sfi19, complete genome	35421-35450	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MH937464	Streptococcus phage CHPC869, complete genome	34213-34242	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MH937480	Streptococcus phage CHPC954, complete genome	34114-34143	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448753	Streptococcus phage Javan407, complete genome	12528-12557	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MH937475	Streptococcus phage CHPC931, complete genome	33663-33692	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MF417967	Uncultured Caudovirales phage clone 3S_16, partial genome	7733-7762	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	AF158601	Streptococcus thermophilus bacteriophage SFi18 lysin, gp111, gp183, gp47, gp54, gp71, gp145, gp69, gp40, gp229, gp157, gp233, putative helicase, gp151, gp271, putative primase, gp143, gp106, gp89, gp57, gp51, gp66, gp192, putative DNA binding protein, gp99, and gp235 genes, complete cds	12499-12528	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	KY705268	Streptococcus phage P7571, complete genome	32083-32112	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	KY705269	Streptococcus phage P7572, complete genome	30586-30615	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	KY705281	Streptococcus phage P7955, complete genome	33997-34026	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	AF115103	Streptococcus thermophilus bacteriophage Sfi21, complete genome	36726-36755	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	NC_013645	Streptococcus phage Abc2, complete genome	31500-31529	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	AF115102	Streptococcus thermophilus bacteriophage Sfi19, complete genome	35421-35450	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	FJ226752	Streptococcus phage ALQ13.2, complete genome	32704-32733	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	NC_002214	Streptococcus thermophilus bacteriophage Sfi11, complete genome	37427-37456	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	KY705272	Streptococcus phage P7601, complete genome	32090-32119	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	KY705271	Streptococcus phage P7574, complete genome	32891-32920	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MH937505	Streptococcus phage CHPC1109, complete genome	30694-30723	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MH937469	Streptococcus phage CHPC919, complete genome	33754-33783	5	0.833
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MH937491	Streptococcus phage CHPC1037, partial genome	33178-33207	5	0.833
NC_018646_1	1.2\|941341\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941341-941370	30	NZ_CP053953	Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence	137743-137772	6	0.8
NC_018646_1	1.2\|941341\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941341-941370	30	NZ_CP053950	Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence	31990-32019	6	0.8
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448896	Streptococcus phage Javan278, complete genome	6108-6137	6	0.8
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448757	Streptococcus phage Javan427, complete genome	14224-14253	6	0.8
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MK448890	Streptococcus phage Javan264, complete genome	30767-30796	6	0.8
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	NC_018685	Bacillus thuringiensis MC28 plasmid pMC95, complete sequence	82837-82866	6	0.8
NC_018646_1	1.2\|941341\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941341-941370	30	MK308676	Vibrio phage vB_VmeM-Yong MS31, complete genome	172842-172871	7	0.767
NC_018646_1	1.2\|941341\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941341-941370	30	MK308675	Vibrio phage vB_VmeM-Yong XC32, complete genome	172841-172870	7	0.767
NC_018646_1	1.2\|941341\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941341-941370	30	MK308677	Vibrio phage vB_VmeM-Yong MS32, complete genome	172842-172871	7	0.767
NC_018646_1	1.2\|941341\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941341-941370	30	MK308674	Vibrio phage vB_VmeM-Yong XC31, complete genome	172841-172870	7	0.767
NC_018646_1	1.2\|941341\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941341-941370	30	MN855763	Myoviridae sp. isolate 210, complete genome	13489-13518	7	0.767
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	NZ_CP006727	Leptospira interrogans serovar Linhai str. 56609 plasmid lcp3, complete sequence	30951-30980	7	0.767
NC_018646_1	1.6\|941605\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941605-941634	30	MK448885	Streptococcus phage Javan252, complete genome	13038-13067	7	0.767
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	NZ_CP034168	Enterococcus avium strain 352 plasmid unnamed, complete sequence	14259-14288	7	0.767
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	NZ_CP013278	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence	130740-130769	7	0.767
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	NC_018509	Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence	124624-124653	7	0.767
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	NZ_CP051859	Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence	1843-1872	7	0.767
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	NZ_CP009347	Bacillus thuringiensis HD1002 plasmid 3, complete sequence	40599-40628	7	0.767
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	NZ_CP045025	Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence	130740-130769	7	0.767
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	NZ_CP053971	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence	180131-180160	7	0.767
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	NZ_CP039724	Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence	2565-2594	7	0.767
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	NC_015417	Clostridium botulinum BKT015925 plasmid p1BKT015925, complete sequence	153049-153078	7	0.767
NC_018646_1	1.2\|941341\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941341-941370	30	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	429648-429677	8	0.733
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	NC_014260	Enterobacteria phage IME08, complete genome	88967-88996	8	0.733
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MN850621	Escherichia phage dhabil, complete genome	126317-126346	8	0.733
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MN850609	Escherichia phage dhaeg, complete genome	76845-76874	8	0.733
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	HM071924	Enterobacteria phage IME08, complete sequence	88967-88996	8	0.733
NC_018646_1	1.7\|941671\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941671-941700	30	MH051917	Enterobacteria phage vB_EcoM_IME341, complete genome	85432-85461	8	0.733
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	NC_018878	Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence	27063-27092	8	0.733
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	MK473382	Clostridium phage JD032, complete genome	12174-12203	8	0.733
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	LN881738	Escherichia phage slur17, complete genome	33369-33398	8	0.733
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	NC_048665	Clostridium phage phiCDHM14, complete genome	22262-22291	8	0.733
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	KU057941	Clostridium phage CDSH1, complete genome	28658-28687	8	0.733
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	NC_028905	Clostridium phage phiCD111, complete genome	28432-28461	8	0.733
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	HG796225	Clostridium phage phiCDHM13 complete genome	21762-21791	8	0.733
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	LN681538	Clostridium phage phiCD481-1, complete genome	21502-21531	8	0.733
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	HG798901	Clostridium phage phiCDHM11 complete genome	21762-21791	8	0.733
NC_018646_1	1.3\|941407\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941407-941436	30	NZ_CP017657	Acinetobacter baumannii strain KAB08 plasmid unnamed, complete sequence	56272-56301	9	0.7
NC_018646_1	1.3\|941407\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941407-941436	30	NZ_CP017649	Acinetobacter baumannii strain KAB04 plasmid unnamed, complete sequence	58335-58364	9	0.7
NC_018646_1	1.3\|941407\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941407-941436	30	NZ_CP050915	Acinetobacter baumannii strain DT-Ab007 plasmid unnamed1, complete sequence	22390-22419	9	0.7
NC_018646_1	1.3\|941407\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941407-941436	30	NZ_CP020580	Acinetobacter baumannii strain SSMA17 plasmid pSSMA17_1, complete sequence	55464-55493	9	0.7
NC_018646_1	1.3\|941407\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941407-941436	30	NZ_CP020582	Acinetobacter baumannii strain JBA13 plasmid pJBA13_1, complete sequence	16314-16343	9	0.7
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	NC_028838	Clostridium phage phiCD506, complete genome	22083-22112	9	0.7
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	HM568888	Clostridium phage phiCD38-2, complete genome	28154-28183	9	0.7
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	NC_028958	Clostridium phage phiCD146, complete genome	27716-27745	9	0.7
NC_018646_1	1.8\|941737\|30\|NC_018646\|PILER-CR,CRISPRCasFinder,CRT	941737-941766	30	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	640927-640956	10	0.667

1. spacer 1.5|941539|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to JX409894 (Streptococcus phage LYGO9, complete genome) position: , mismatch: 0, identity: 1.0

caattgattgccgttaaaaccgatagagga	CRISPR spacer
caattgattgccgttaaaaccgatagagga	Protospacer
******************************

2. spacer 1.5|941539|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 0, identity: 1.0

caattgattgccgttaaaaccgatagagga	CRISPR spacer
caattgattgccgttaaaaccgatagagga	Protospacer
******************************

3. spacer 1.5|941539|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 0, identity: 1.0

caattgattgccgttaaaaccgatagagga	CRISPR spacer
caattgattgccgttaaaaccgatagagga	Protospacer
******************************

4. spacer 1.5|941539|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to JX409895 (Streptococcus phage JX01, complete genome) position: , mismatch: 0, identity: 1.0

caattgattgccgttaaaaccgatagagga	CRISPR spacer
caattgattgccgttaaaaccgatagagga	Protospacer
******************************

5. spacer 1.5|941539|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 0, identity: 1.0

caattgattgccgttaaaaccgatagagga	CRISPR spacer
caattgattgccgttaaaaccgatagagga	Protospacer
******************************

6. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 0, identity: 1.0

aagtgccacagtttgtggctgattggattg	CRISPR spacer
aagtgccacagtttgtggctgattggattg	Protospacer
******************************

7. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 0, identity: 1.0

aagtgccacagtttgtggctgattggattg	CRISPR spacer
aagtgccacagtttgtggctgattggattg	Protospacer
******************************

8. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 0, identity: 1.0

tcttctttttaattcttctaacactccatc	CRISPR spacer
tcttctttttaattcttctaacactccatc	Protospacer
******************************

9. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 0, identity: 1.0

tcttctttttaattcttctaacactccatc	CRISPR spacer
tcttctttttaattcttctaacactccatc	Protospacer
******************************

10. spacer 1.5|941539|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 1, identity: 0.967

caattgattgccgttaaaaccgatagagga	CRISPR spacer
taattgattgccgttaaaaccgatagagga	Protospacer
.*****************************

11. spacer 1.5|941539|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 1, identity: 0.967

caattgattgccgttaaaaccgatagagga	CRISPR spacer
taattgattgccgttaaaaccgatagagga	Protospacer
.*****************************

12. spacer 1.5|941539|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 1, identity: 0.967

caattgattgccgttaaaaccgatagagga	CRISPR spacer
taattgattgccgttaaaaccgatagagga	Protospacer
.*****************************

13. spacer 1.5|941539|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 1, identity: 0.967

caattgattgccgttaaaaccgatagagga	CRISPR spacer
taattgattgccgttaaaaccgatagagga	Protospacer
.*****************************

14. spacer 1.5|941539|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 2, identity: 0.933

caattgattgccgttaaaaccgatagagga	CRISPR spacer
caattgattgccattaaaaccgatcgagga	Protospacer
************.*********** *****

15. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448704 (Streptococcus phage Javan213, complete genome) position: , mismatch: 2, identity: 0.933

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatttgtggctgattggattg	Protospacer
 *********.*******************

16. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448734 (Streptococcus phage Javan347, complete genome) position: , mismatch: 2, identity: 0.933

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacagtttgtggcggattggattg	Protospacer
 ****************** **********

17. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448876 (Streptococcus phage Javan214, complete genome) position: , mismatch: 2, identity: 0.933

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatttgtggctgattggattg	Protospacer
 *********.*******************

18. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to HG424323 (Streptococcus phage 20617 complete prophage genome) position: , mismatch: 2, identity: 0.933

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaactct	Protospacer
.************** **************

19. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 3, identity: 0.9

aagtgccacagtttgtggctgattggattg	CRISPR spacer
aagtgccacagtttgttgctgattggtatg	Protospacer
**************** *********  **

20. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448822 (Streptococcus phage Javan629, complete genome) position: , mismatch: 3, identity: 0.9

aagtgccacagtttgtggctgattggattg	CRISPR spacer
aagtgccacagtttgttgctgattggtatg	Protospacer
**************** *********  **

21. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH892366 (Streptococcus phage SW18, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

22. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH937501 (Streptococcus phage CHPC1073, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

23. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH973662 (Streptococcus phage SW7, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

24. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH892373 (Streptococcus phage SW27, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

25. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705256 (Streptococcus phage P3681, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

26. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MF161328 (Streptococcus phage D4276, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccttcaacagtaaccct	Protospacer
.**************.***********.**

27. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KX879643 (Streptococcus phage CHPC1151, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

28. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH937458 (Streptococcus phage CHPC572, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

29. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH892363 (Streptococcus phage SW14, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

30. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705252 (Streptococcus phage P0092, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

31. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH937506 (Streptococcus phage CHPC1148, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaaccgtaactct	Protospacer
.************** ***** ********

32. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH937486 (Streptococcus phage CHPC1027, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

33. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH937471 (Streptococcus phage CHPC927, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

34. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705282 (Streptococcus phage P8921, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

35. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705253 (Streptococcus phage P0093, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

36. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705287 (Streptococcus phage P9854, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

37. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH892367 (Streptococcus phage SW19, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

38. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH892355 (Streptococcus phage SW4, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

39. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705263 (Streptococcus phage P7133, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

40. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH937467 (Streptococcus phage CHPC877, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

41. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705254 (Streptococcus phage P0094, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

42. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705264 (Streptococcus phage P7134, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

43. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705260 (Streptococcus phage P5651, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

44. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705284 (Streptococcus phage P9851, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

45. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH973663 (Streptococcus phage SW24, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

46. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705272 (Streptococcus phage P7601, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

47. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH937488 (Streptococcus phage CHPC1033, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

48. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705271 (Streptococcus phage P7574, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

49. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705265 (Streptococcus phage P7151, complete genome) position: , mismatch: 3, identity: 0.9

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tattcaaggactaccatcaacagtaaccct	Protospacer
.************** ***********.**

50. spacer 1.4|941473|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.867

gcttggtctcgaagaattacagaagaacat	CRISPR spacer
ttttggtctcgtcgaattacagaagaacat	Protospacer
 .*********  *****************

51. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448736 (Streptococcus phage Javan35, complete genome) position: , mismatch: 4, identity: 0.867

aagtgccacagtttgtggctgattggattg	CRISPR spacer
aagtgccacggtttgtggctgattggtacg	Protospacer
*********.****************  .*

52. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448781 (Streptococcus phage Javan5, complete genome) position: , mismatch: 4, identity: 0.867

aagtgccacagtttgtggctgattggattg	CRISPR spacer
aagtgccacggtttgtggctgattggtacg	Protospacer
*********.****************  .*

53. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448938 (Streptococcus phage Javan44, complete genome) position: , mismatch: 4, identity: 0.867

aagtgccacagtttgtggctgattggattg	CRISPR spacer
aagtgccacggtttgtggctgattggtacg	Protospacer
*********.****************  .*

54. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to HG424323 (Streptococcus phage 20617 complete prophage genome) position: , mismatch: 4, identity: 0.867

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagttccacaatttgtggctgattggattt	Protospacer
 *** *****.******************

55. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448911 (Streptococcus phage Javan34, complete genome) position: , mismatch: 4, identity: 0.867

aagtgccacagtttgtggctgattggattg	CRISPR spacer
aagtgccacggtttgtggctgattggtacg	Protospacer
*********.****************  .*

56. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448916 (Streptococcus phage Javan36, complete genome) position: , mismatch: 4, identity: 0.867

aagtgccacagtttgtggctgattggattg	CRISPR spacer
aagtgccacggtttgtggctgattggtacg	Protospacer
*********.****************  .*

57. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448755 (Streptococcus phage Javan423, complete genome) position: , mismatch: 4, identity: 0.867

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccgaagtttgtggctgattggatag	Protospacer
 ******. ******************* *

58. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448756 (Streptococcus phage Javan425, complete genome) position: , mismatch: 4, identity: 0.867

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccgaagtttgtggctgattggatag	Protospacer
 ******. ******************* *

59. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448707 (Streptococcus phage Javan227, complete genome) position: , mismatch: 4, identity: 0.867

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatttgtggctgattggtatg	Protospacer
 *********.***************  **

60. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 4, identity: 0.867

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgcctcagtttgtggctgattgggtag	Protospacer
 ****** ******************.* *

61. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK449012 (Streptococcus phage Javan94, complete genome) position: , mismatch: 4, identity: 0.867

aagtgccacagtttgtggctgattggattg	CRISPR spacer
aagttccacaatttgtggctgattggtatg	Protospacer
**** *****.***************  **

62. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448680 (Streptococcus phage Javan139, complete genome) position: , mismatch: 4, identity: 0.867

aagtgccacagtttgtggctgattggattg	CRISPR spacer
aagtcccgcagtttgtggctgattggctag	Protospacer
**** **.****************** * *

63. spacer 1.4|941473|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NC_014838 (Pantoea sp. At-9b plasmid pPAT9B01, complete sequence) position: , mismatch: 5, identity: 0.833

gcttggtctcgaagaattacagaagaacat	CRISPR spacer
ttctggtcacgaagaatcacagaagaacat	Protospacer
 ..***** ********.************

64. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NC_000872 (Streptococcus phage Sfi21, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

65. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705251 (Streptococcus phage P0091, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
cagtgccaaagtttgtggcggattggtatg	Protospacer
 ******* ********** ******  **

66. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705273 (Streptococcus phage P7602, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

67. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH937473 (Streptococcus phage CHPC929, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

68. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH892360 (Streptococcus phage SW11, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

69. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH892353 (Streptococcus phage SW2, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtaccgcagtttgtggctgattggtatg	Protospacer
 ***.**.******************  **

70. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705277 (Streptococcus phage P7951, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

71. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NC_000871 (Streptococcus phage Sfi19, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

72. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH937464 (Streptococcus phage CHPC869, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

73. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH937480 (Streptococcus phage CHPC954, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

74. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448753 (Streptococcus phage Javan407, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacagtttgtggcggagtggtatg	Protospacer
 ****************** ** ***  **

75. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH937475 (Streptococcus phage CHPC931, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

76. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MF417967 (Uncultured Caudovirales phage clone 3S_16, partial genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
caatcccgcagtttgtggcggattggattg	Protospacer
 *.* **.*********** **********

77. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to AF158601 (Streptococcus thermophilus bacteriophage SFi18 lysin, gp111, gp183, gp47, gp54, gp71, gp145, gp69, gp40, gp229, gp157, gp233, putative helicase, gp151, gp271, putative primase, gp143, gp106, gp89, gp57, gp51, gp66, gp192, putative DNA binding protein, gp99, and gp235 genes, complete cds) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

78. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705268 (Streptococcus phage P7571, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

79. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705269 (Streptococcus phage P7572, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

80. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705281 (Streptococcus phage P7955, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

81. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to AF115103 (Streptococcus thermophilus bacteriophage Sfi21, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

82. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NC_013645 (Streptococcus phage Abc2, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
cagtgccgcagtttgtggcggattgggtag	Protospacer
 ******.*********** ******.* *

83. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to AF115102 (Streptococcus thermophilus bacteriophage Sfi19, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

84. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to FJ226752 (Streptococcus phage ALQ13.2, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

85. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NC_002214 (Streptococcus thermophilus bacteriophage Sfi11, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

86. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705272 (Streptococcus phage P7601, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

87. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KY705271 (Streptococcus phage P7574, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

88. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH937505 (Streptococcus phage CHPC1109, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

89. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH937469 (Streptococcus phage CHPC919, complete genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

90. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH937491 (Streptococcus phage CHPC1037, partial genome) position: , mismatch: 5, identity: 0.833

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tagtgccacaatatgtggctgattggtatg	Protospacer
 *********.* *************  **

91. spacer 1.2|941341|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

aatgcgttcattttgtaagaaatctatcaa--	CRISPR spacer
aattctttcattttgtaagaaa--taataatt	Protospacer
*** * ****************  ** .**

92. spacer 1.2|941341|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

aatgcgttcattttgtaagaaatctatcaa--	CRISPR spacer
aattctttcattttgtaagaaa--taataatt	Protospacer
*** * ****************  ** .**

93. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448896 (Streptococcus phage Javan278, complete genome) position: , mismatch: 6, identity: 0.8

aagtgccacagtttgtggctgattggattg	CRISPR spacer
tcattccgcagtttgtggccgattggattg	Protospacer
  .* **.***********.**********

94. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448757 (Streptococcus phage Javan427, complete genome) position: , mismatch: 6, identity: 0.8

aagtgccacagtttgtggctgattggattg	CRISPR spacer
aagttaagaagtttgtggctgaatggattg	Protospacer
****   . ************* *******

95. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448890 (Streptococcus phage Javan264, complete genome) position: , mismatch: 6, identity: 0.8

cattcaaggactaccctcaacagtaactct	CRISPR spacer
tatcaacggtctaccctcaacagtaacact	Protospacer
.**. * ** ***************** **

96. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NC_018685 (Bacillus thuringiensis MC28 plasmid pMC95, complete sequence) position: , mismatch: 6, identity: 0.8

tcttctttttaattcttctaacactccatc	CRISPR spacer
actattttttaattcttctaacattccttt	Protospacer
 ** .******************.*** *.

97. spacer 1.2|941341|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK308676 (Vibrio phage vB_VmeM-Yong MS31, complete genome) position: , mismatch: 7, identity: 0.767

aatgcgttcattttgtaagaaatctatcaa	CRISPR spacer
aatgcgttcattttctaagaaatttggacg	Protospacer
************** ********.*.   .

98. spacer 1.2|941341|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK308675 (Vibrio phage vB_VmeM-Yong XC32, complete genome) position: , mismatch: 7, identity: 0.767

aatgcgttcattttgtaagaaatctatcaa	CRISPR spacer
aatgcgttcattttctaagaaatttggacg	Protospacer
************** ********.*.   .

99. spacer 1.2|941341|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK308677 (Vibrio phage vB_VmeM-Yong MS32, complete genome) position: , mismatch: 7, identity: 0.767

aatgcgttcattttgtaagaaatctatcaa	CRISPR spacer
aatgcgttcattttctaagaaatttggacg	Protospacer
************** ********.*.   .

100. spacer 1.2|941341|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK308674 (Vibrio phage vB_VmeM-Yong XC31, complete genome) position: , mismatch: 7, identity: 0.767

aatgcgttcattttgtaagaaatctatcaa	CRISPR spacer
aatgcgttcattttctaagaaatttggacg	Protospacer
************** ********.*.   .

101. spacer 1.2|941341|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MN855763 (Myoviridae sp. isolate 210, complete genome) position: , mismatch: 7, identity: 0.767

aatgcgttcattttgtaagaaatctatcaa	CRISPR spacer
aatgcgttcattttgaaagaaaaacaaaat	Protospacer
*************** ******  .*  *

102. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006727 (Leptospira interrogans serovar Linhai str. 56609 plasmid lcp3, complete sequence) position: , mismatch: 7, identity: 0.767

aagtgccacagtttgtggctgattggattg	CRISPR spacer
aagtgccaaagattgtggctgatgcgaagc	Protospacer
******** ** ***********  **

103. spacer 1.6|941605|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK448885 (Streptococcus phage Javan252, complete genome) position: , mismatch: 7, identity: 0.767

aagtgccacagtttgtggctgattggattg	CRISPR spacer
ctattccgaagtttgtggcggattggattg	Protospacer
  .* **. ********** **********

104. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034168 (Enterococcus avium strain 352 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tcttctttttaattcttctaacactccatc	CRISPR spacer
attggtttttaattcttctaatactgcatt	Protospacer
 .*  ****************.*** ***.

105. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013278 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence) position: , mismatch: 7, identity: 0.767

tcttctttttaattcttctaacactccatc	CRISPR spacer
tcttgtttttaactcttctaacaaagcgcc	Protospacer
**** *******.**********   *..*

106. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NC_018509 (Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence) position: , mismatch: 7, identity: 0.767

tcttctttttaattcttctaacactccatc	CRISPR spacer
tcttgtttttaactcttctaacaaagcgcc	Protospacer
**** *******.**********   *..*

107. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051859 (Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence) position: , mismatch: 7, identity: 0.767

tcttctttttaattcttctaacactccatc	CRISPR spacer
tcttgtttttaactcttctaacaaagcgcc	Protospacer
**** *******.**********   *..*

108. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009347 (Bacillus thuringiensis HD1002 plasmid 3, complete sequence) position: , mismatch: 7, identity: 0.767

tcttctttttaattcttctaacactccatc	CRISPR spacer
tcttgtttttaactcttctaacaaagcgcc	Protospacer
**** *******.**********   *..*

109. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045025 (Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.767

tcttctttttaattcttctaacactccatc	CRISPR spacer
tcttgtttttaactcttctaacaaagcgcc	Protospacer
**** *******.**********   *..*

110. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053971 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

tcttctttttaattcttctaacactccatc	CRISPR spacer
tcttgtttttaactcttctaacaaagcgcc	Protospacer
**** *******.**********   *..*

111. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039724 (Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.767

tcttctttttaattcttctaacactccatc	CRISPR spacer
tcttgtttttaactcttctaacaaagcgcc	Protospacer
**** *******.**********   *..*

112. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NC_015417 (Clostridium botulinum BKT015925 plasmid p1BKT015925, complete sequence) position: , mismatch: 7, identity: 0.767

tcttctttttaattcttctaacactccatc	CRISPR spacer
ttccttttttaattcttctaatactcgttc	Protospacer
*....****************.****  **

113. spacer 1.2|941341|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 8, identity: 0.733

aatgcgttcattttgtaagaaatctatcaa	CRISPR spacer
taagtacgtattttgcaagaaatctatcaa	Protospacer
 * *... .******.**************

114. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NC_014260 (Enterobacteria phage IME08, complete genome) position: , mismatch: 8, identity: 0.733

cattcaaggactaccctcaacagtaactct	CRISPR spacer
gattcaagaactaccctaaacagtgaaggg	Protospacer
 *******.******** ******.*

115. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MN850621 (Escherichia phage dhabil, complete genome) position: , mismatch: 8, identity: 0.733

cattcaaggactaccctcaacagtaactct	CRISPR spacer
gattcaagaactaccctaaacagtgaaggg	Protospacer
 *******.******** ******.*

116. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MN850609 (Escherichia phage dhaeg, complete genome) position: , mismatch: 8, identity: 0.733

cattcaaggactaccctcaacagtaactct	CRISPR spacer
gattcaagaactaccctaaacagtgaaggg	Protospacer
 *******.******** ******.*

117. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to HM071924 (Enterobacteria phage IME08, complete sequence) position: , mismatch: 8, identity: 0.733

cattcaaggactaccctcaacagtaactct	CRISPR spacer
gattcaagaactaccctaaacagtgaaggg	Protospacer
 *******.******** ******.*

118. spacer 1.7|941671|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MH051917 (Enterobacteria phage vB_EcoM_IME341, complete genome) position: , mismatch: 8, identity: 0.733

cattcaaggactaccctcaacagtaactct	CRISPR spacer
gattcaagaactaccctaaacagtgaaggg	Protospacer
 *******.******** ******.*

119. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 8, identity: 0.733

tcttctttttaattcttctaacactccatc	CRISPR spacer
ctgtagtttaaattcatctaacactccatt	Protospacer
.. *  *** ***** *************.

120. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 8, identity: 0.733

tcttctttttaattcttctaacactccatc	CRISPR spacer
ttttcttttcaattcttctaacatattagt	Protospacer
*.*******.*************. ..* .

121. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 8, identity: 0.733

tcttctttttaattcttctaacactccatc	CRISPR spacer
ttttcttttcaattcttctaacatattagt	Protospacer
*.*******.*************. ..* .

122. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 8, identity: 0.733

tcttctttttaattcttctaacactccatc	CRISPR spacer
ttttcttttcaattcttctaacatattagt	Protospacer
*.*******.*************. ..* .

123. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 8, identity: 0.733

tcttctttttaattcttctaacactccatc	CRISPR spacer
ttttcttttcaattcttctaacatattagt	Protospacer
*.*******.*************. ..* .

124. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 8, identity: 0.733

tcttctttttaattcttctaacactccatc	CRISPR spacer
ttttcttttcaattcttctaacatattagt	Protospacer
*.*******.*************. ..* .

125. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 8, identity: 0.733

tcttctttttaattcttctaacactccatc	CRISPR spacer
ttttcttttcaattcttctaacatattagt	Protospacer
*.*******.*************. ..* .

126. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 8, identity: 0.733

tcttctttttaattcttctaacactccatc	CRISPR spacer
ttttcttttcaattcttctaacatattagt	Protospacer
*.*******.*************. ..* .

127. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 8, identity: 0.733

tcttctttttaattcttctaacactccatc	CRISPR spacer
ttttcttttcaattcttctaacatattagt	Protospacer
*.*******.*************. ..* .

128. spacer 1.3|941407|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017657 (Acinetobacter baumannii strain KAB08 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

atgttgtagaatcatatcgaccatataacc	CRISPR spacer
tggttgtagaatcaaatcgaccaagcattt	Protospacer
  ************ ******** ..* ..

129. spacer 1.3|941407|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017649 (Acinetobacter baumannii strain KAB04 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

atgttgtagaatcatatcgaccatataacc	CRISPR spacer
tggttgtagaatcaaatcgaccaagcattt	Protospacer
  ************ ******** ..* ..

130. spacer 1.3|941407|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050915 (Acinetobacter baumannii strain DT-Ab007 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

atgttgtagaatcatatcgaccatataacc	CRISPR spacer
tggttgtagaatcaaatcgaccaagcattt	Protospacer
  ************ ******** ..* ..

131. spacer 1.3|941407|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020580 (Acinetobacter baumannii strain SSMA17 plasmid pSSMA17_1, complete sequence) position: , mismatch: 9, identity: 0.7

atgttgtagaatcatatcgaccatataacc	CRISPR spacer
tggttgtagaatcaaatcgaccaagcattt	Protospacer
  ************ ******** ..* ..

132. spacer 1.3|941407|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020582 (Acinetobacter baumannii strain JBA13 plasmid pJBA13_1, complete sequence) position: , mismatch: 9, identity: 0.7

atgttgtagaatcatatcgaccatataacc	CRISPR spacer
tggttgtagaatcaaatcgaccaagcattt	Protospacer
  ************ ******** ..* ..

133. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 9, identity: 0.7

tcttctttttaattcttctaacactccatc	CRISPR spacer
ctttcttttcaattcttctaacatattagt	Protospacer
..*******.*************. ..* .

134. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 9, identity: 0.7

tcttctttttaattcttctaacactccatc	CRISPR spacer
ctttcttttcaattcttctaacatattagt	Protospacer
..*******.*************. ..* .

135. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 9, identity: 0.7

tcttctttttaattcttctaacactccatc	CRISPR spacer
ctttcttttcaattcttctaacatattagt	Protospacer
..*******.*************. ..* .

136. spacer 1.8|941737|30|NC_018646|PILER-CR,CRISPRCasFinder,CRT matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 10, identity: 0.667

tcttctttttaattcttctaacactccatc	CRISPR spacer
aagaatttttaattcttctaagactctcat	Protospacer
     **************** ****.  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

36566 : 48631

Microbacterium_phage(14.29%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001042263.1\|36566_40292_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.6e-40	27.0
WP_000220672.1\|40525_41980_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.3e-54	32.5
WP_001291325.1\|42007_43030_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	9.6e-65	44.6
WP_000685111.1\|43197_43749_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.8e-25	35.6
WP_000780020.1\|43768_44521_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000166558.1\|44540_46088_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	2.5e-77	48.9
WP_001045908.1\|46280_47180_+	peptidoglycan DD-metalloendopeptidase family protein	A0A221J6U0	Arthrobacter_phage	4.1e-19	45.9
WP_000783424.1\|47326_48631_+	LysM peptidoglycan-binding domain-containing protein	A0A2D1GNZ3	Streptomyces_phage	1.7e-05	40.5

DBSCAN-SWA_2

596783 : 667377

Streptococcus_phage(86.96%)

portal,protease,capsid,head,tail,transposase,terminase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001122304.1\|596783_596984_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_001865698.1\|597005_597266_+\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	3.4e-11	43.0
WP_001867107.1\|597391_597601_+\|transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	1.4e-15	55.4
WP_000508795.1\|597773_597935_-	NINE protein	NA	NA	NA	NA
WP_000594368.1\|598676_599954_+	ABC transporter permease	NA	NA	NA	NA
WP_000353149.1\|599963_600620_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-22	31.8
WP_000594351.1\|600619_601996_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_000699093.1\|602092_602746_+	response regulator transcription factor	W8CYM9	Bacillus_phage	8.1e-25	33.6
WP_000734168.1\|602742_604044_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.7e-05	25.7
WP_000076709.1\|604920_605100_+	CsbD family protein	J7KJ36	Streptococcus_phage	4.3e-21	96.4
WP_000027835.1\|605141_605330_+	hypothetical protein	J7KIW4	Streptococcus_phage	3.3e-16	78.2
WP_000078931.1\|605754_606960_+	rod shape-determining protein RodA	NA	NA	NA	NA
WP_001106189.1\|607078_607639_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_000134196.1\|607639_609592_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	1.5e-143	44.8
WP_000094341.1\|609685_611410_+	septation ring formation regulator EzrA	NA	NA	NA	NA
WP_000589685.1\|611503_612145_+	phosphoserine phosphatase SerB	NA	NA	NA	NA
WP_000409124.1\|612165_612651_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_000137373.1\|612663_613119_-	YueI family protein	W6LLD2	Streptococcus_phage	7.8e-27	48.9
WP_000022832.1\|613316_614624_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	1.5e-235	95.4
WP_000823925.1\|614731_615796_-	DNA/RNA non-specific endonuclease	NA	NA	NA	NA
WP_000772014.1\|616024_617308_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_001127193.1\|617300_617813_+	shikimate kinase	NA	NA	NA	NA
WP_000089337.1\|617869_619243_+	LCP family protein	NA	NA	NA	NA
WP_000902654.1\|619343_620699_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	D0R096	Streptococcus_phage	1.8e-191	73.6
WP_001261516.1\|621220_621739_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA
WP_000445926.1\|622040_622571_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000944926.1\|622741_625897_+	YSIRK signal domain/LPXTG anchor domain surface protein	NA	NA	NA	NA
WP_000459854.1\|626756_628625_+	ImmA/IrrE family metallo-endopeptidase	E4ZFJ9	Streptococcus_phage	5.2e-303	81.0
WP_001122250.1\|629033_629603_+	hypothetical protein	A0A1B0RXB3	Streptococcus_phage	1.1e-86	81.0
WP_000905646.1\|629641_631597_-	DNA polymerase	D0R0B0	Streptococcus_phage	0.0e+00	84.0
WP_000464240.1\|631646_631811_-	hypothetical protein	NA	NA	NA	NA
WP_000208946.1\|631827_632391_-	DUF2815 family protein	A0A1B0RXA9	Streptococcus_phage	3.3e-91	93.4
WP_001873559.1\|632395_633517_-	DUF2800 domain-containing protein	A0A1X9I6D8	Streptococcus_phage	2.6e-196	87.9
WP_000041407.1\|633509_633833_-	hypothetical protein	A0A1B0RXB7	Streptococcus_phage	2.0e-32	71.2
WP_001160920.1\|634229_636515_+	hypothetical protein	E4ZFK6	Streptococcus_phage	0.0e+00	79.1
WP_001208492.1\|636798_637080_+	VRR-NUC domain-containing protein	M1PFY8	Streptococcus_phage	7.9e-38	79.6
WP_000768926.1\|637060_638437_+	DEAD/DEAH box helicase	A0A1X9I6B0	Streptococcus_phage	5.2e-231	86.2
WP_000356300.1\|638429_638927_+	hypothetical protein	A0A1B0RXB9	Streptococcus_phage	4.3e-63	75.0
WP_000640707.1\|639319_640357_+	methionine adenosyltransferase	E4ZFL0	Streptococcus_phage	2.2e-170	84.9
WP_001138031.1\|640358_640724_+	HNH endonuclease	A0A1B0RXJ3	Streptococcus_phage	6.6e-61	86.0
WP_000999418.1\|641011_641467_+	hypothetical protein	A0A1B0RXC6	Streptococcus_phage	5.4e-44	51.0
WP_000211620.1\|641438_642695_+	DNA modification methylase	A0A1B0RXE5	Streptococcus_phage	7.5e-221	90.7
WP_000176350.1\|642691_643945_+	DNA (cytosine-5-)-methyltransferase	M1NSK8	Streptococcus_phage	2.5e-232	93.8
WP_000164539.1\|644022_644277_+	hypothetical protein	NA	NA	NA	NA
WP_000342209.1\|644287_644737_+	DUF4314 domain-containing protein	E4ZFL7	Streptococcus_phage	2.1e-16	65.2
WP_000220985.1\|645243_646836_+\|terminase	terminase large subunit	A0A1B0RXJ8	Streptococcus_phage	1.5e-306	95.5
WP_001140392.1\|646891_647194_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_000666489.1\|647193_647499_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_000424367.1\|647515_647788_+	hypothetical protein	E4ZFM1	Streptococcus_phage	4.1e-07	78.0
WP_000523688.1\|647868_649158_+\|portal	phage portal protein	E4ZFM3	Streptococcus_phage	2.0e-229	91.0
WP_001225236.1\|649150_649849_+\|protease	Clp protease ClpP	A0A1B0RXE1	Streptococcus_phage	1.4e-104	82.8
WP_000040500.1\|649862_651071_+\|capsid	phage major capsid protein	E4ZFM5	Streptococcus_phage	6.8e-211	91.3
WP_000988605.1\|651067_651325_+\|head,tail	phage gp6-like head-tail connector protein	D0R0D7	Streptococcus_phage	4.3e-30	78.8
WP_000684962.1\|651324_651663_+\|head,tail	head-tail adaptor protein	A0A1B0RXE4	Streptococcus_phage	1.2e-37	69.6
WP_000161241.1\|651655_652024_+	HK97 gp10 family phage protein	Q6DMT7	Streptococcus_phage	9.1e-34	62.1
WP_001209971.1\|652032_652359_+	hypothetical protein	M1Q1Z4	Streptococcus_phage	5.4e-38	67.6
WP_000818565.1\|652361_652931_+	hypothetical protein	E4ZFM9	Streptococcus_phage	5.1e-100	97.3
WP_001249616.1\|652942_653362_+	hypothetical protein	A0A1X9I691	Streptococcus_phage	2.8e-55	75.5
WP_000918343.1\|653656_656776_+\|tail	phage tail tape measure protein	Q6DMT2	Streptococcus_phage	3.5e-259	78.0
WP_000589863.1\|656772_657498_+	hypothetical protein	Q6DMT1	Streptococcus_phage	2.1e-82	58.8
WP_000966169.1\|657497_660413_+\|tail	phage tail protein	Q6DMT0	Streptococcus_phage	0.0e+00	64.6
WP_000796404.1\|660425_662282_+	hypothetical protein	Q6DMS9	Streptococcus_phage	2.7e-259	73.3
WP_000661349.1\|662299_662698_+\|holin	phage holin family protein	D0R0E9	Streptococcus_phage	5.1e-38	60.8
WP_000143479.1\|662699_664106_+	glucosaminidase domain-containing protein	A0A1B0RXL4	Streptococcus_phage	3.7e-107	63.4
WP_000123549.1\|664241_664349_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_000290970.1\|664886_666128_+	recombinase family protein	A0A1X9I6J1	Streptococcus_phage	3.5e-170	69.5
WP_001932552.1\|666030_667377_+	recombinase family protein	E4ZFN9	Streptococcus_phage	5.4e-201	79.1

DBSCAN-SWA_3

1522769 : 1534287

Streptococcus_phage(90.91%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000767484.1\|1522769_1523597_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	4.3e-124	78.0
WP_000287944.1\|1523636_1523993_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.5e-41	71.8
WP_000966772.1\|1523994_1524471_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	7.1e-39	50.9
WP_000232156.1\|1524525_1525707_-	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	7.0e-168	75.6
WP_001167085.1\|1525769_1526318_-	acetyltransferase	M1PSC3	Streptococcus_phage	1.1e-54	58.4
WP_000603277.1\|1527610_1528246_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_000425856.1\|1528515_1529385_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	4.9e-110	70.4
WP_000358198.1\|1529384_1529711_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	3.2e-30	61.1
WP_000364565.1\|1529740_1530604_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	7.3e-74	49.7
WP_000715592.1\|1530623_1531259_-	dTMP kinase	M1PSC7	Streptococcus_phage	2.8e-67	61.1
WP_000160536.1\|1531467_1532634_+\|transposase	IS30-like element ISSag9 family transposase	NA	NA	NA	NA
WP_001144248.1\|1532898_1533558_-	CBS domain-containing protein	M1NSC5	Streptococcus_phage	5.2e-64	55.6
WP_000178146.1\|1533576_1534287_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.7e-18	28.5

DBSCAN-SWA_4

2032458 : 2039662

uncultured_Caudovirales_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001042661.1\|2032458_2033163_-	transglycosylase SLT domain-containing protein	A0A2H4J6C5	uncultured_Caudovirales_phage	3.2e-27	56.6
WP_000029067.1\|2033268_2033808_-	LysM peptidoglycan-binding domain-containing protein	A0A249XZV3	Enterococcus_phage	3.0e-17	46.4
WP_000359358.1\|2034023_2034818_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_000510606.1\|2034810_2035653_-	energy-coupling factor transporter ATPase	A0A2H4PQG7	Staphylococcus_phage	2.0e-15	28.5
WP_000181757.1\|2035628_2036468_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	3.5e-20	30.0
WP_000239224.1\|2036467_2037010_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_000217765.1\|2037132_2038416_-	insulinase family protein	A0A2H4UVM3	Bodo_saltans_virus	1.6e-05	23.6
WP_000706190.1\|2038417_2039662_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	1.7e-87	41.5

Anti-CRISPR protein detection

Acr_ID: NC_018646.1|WP_000384271.1|246532_246859_+|replication-initiator-protein-A

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NC_018646.1|WP_000384271.1|246532_246859_+|replication-initiator-protein-A

246532_246859_+

108 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|63	1.0	1	1.0

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_018646

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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