CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NC_018682	Sinorhizobium meliloti Rm41 plasmid pRM41A, complete sequence	0 crisprs	NA	0	0	0
NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	1 crisprs	DEDDh	0	1	0
NC_018700	Sinorhizobium meliloti Rm41, complete genome	3 crisprs	csa3,WYL,cas3,DEDDh	1	2	7
NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	3 crisprs	csa3,RT	0	3	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_018683_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018683_1

618022-618131

Orphan

Consensus_repeat	Method
TCATCCCGGCGGTCCCGCCGCGCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018683_1

>merge|NC_018683|1|618022-618131|CRISPRCasFinder
TCATCCCGGCGGTCCCGCCGCGCGGCGATCAGGTCCATGAGCCGCTCGCGCCGGTCGCCGCGGTCGCCGATCAGTTCCATCAGGTCATCGCGGCGGTCCCGCCGCGCGGC

>NC_018683|1|1|618022-618131|CRISPRCasFinder
TCATCCCGGCGGTCCCGCCGCGCGGC	GATCAGGTCCATGAGCCGCTCGCGCCGGTCGCCGCGGTCGCCGATCAGTTCCATCAGG
TCATCGCGGCGGTCCCGCCGCGCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_018683.1\|WP_017274532.1\|610917_611742_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NC_018683.1\|WP_017265939.1\|623177_623534_+\|BA14K-family-protein	unknown	unknown	gnl\|CDD\|369573
NC_018683.1\|WP_017266314.1\|617101_617251_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|288799
NC_018683.1\|WP_020479730.1\|611862_612780_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293840
NC_018683.1\|WP_010967341.1\|636783_637419_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|236494
NC_018683.1\|WP_014528417.1\|631390_631843_+\|DUF2721-domain-containing-protein	unknown	unknown	gnl\|CDD\|378544
NC_018683.1\|WP_014989899.1\|636246_636726_+\|hypothetical-protein	unknown	unknown	unknown
NC_018683.1\|WP_014528410.1\|617291_617639_-\|hypothetical-protein	unknown	unknown	unknown
NC_018683.1\|WP_014989885.1\|614668_615385_-\|hypothetical-protein	unknown	unknown	unknown
NC_018683.1\|WP_041169465.1\|623795_625880_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|306677
NC_018683.1\|WP_014531860.1\|619004_620765_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227903
NC_018683.1\|WP_014989880.1\|607723_608359_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|226932
NC_018683.1\|WP_014528407.1\|613428_614619_-\|PLP-dependent-transferase	unknown	unknown	gnl\|CDD\|223699
NC_018683.1\|WP_014989884.1\|612809_613151_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|223672
NC_018683.1\|WP_041169521.1\|608363_610412_-\|PAS-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226654
NC_018683.1\|WP_127570217.1\|628881_629388_-\|hypothetical-protein	unknown	unknown	unknown
NC_018683.1\|WP_014528416.1\|628206_628554_-\|hypothetical-protein	unknown	unknown	unknown
NC_018683.1\|WP_153444958.1\|635124_635763_+\|NapC/NirT-family-cytochrome-c	unknown	unknown	gnl\|CDD\|131216
NC_018683.1\|WP_014531840.1\|633657_634005_-\|hypothetical-protein	unknown	unknown	unknown
NC_018683.1\|WP_014528409.1\|615633_616623_+\|zinc-dependent-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|176233

Protein	Function_ID	Function_description	E-value
NC_018683.1\|WP_017274532.1\|610917_611742_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	6.09328e-43
NC_018683.1\|WP_017265939.1\|623177_623534_+\|BA14K-family-protein	gnl\|CDD\|369573	pfam07886, BA14K, BA14K-like protein. The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus and by Brucella suis. BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process.	1.70794e-08
NC_018683.1\|WP_017266314.1\|617101_617251_+\|hypothetical-protein	gnl\|CDD\|288799	pfam11972, HTH_13, HTH DNA binding domain. This is a helix-turn-helix DNA binding domain.	2.84173e-06
NC_018683.1\|WP_020479730.1\|611862_612780_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293840	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	2.03538e-49
NC_018683.1\|WP_010967341.1\|636783_637419_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|236494	PRK09391, fixK, transcriptional regulator FixK; Provisional.	7.98396e-108
NC_018683.1\|WP_014528417.1\|631390_631843_+\|DUF2721-domain-containing-protein	gnl\|CDD\|378544	pfam11026, DUF2721, Protein of unknown function (DUF2721). This family is conserved in bacteria. The function is not known.	1.39673e-15
NC_018683.1\|WP_041169465.1\|623795_625880_-\|HAMP-domain-containing-protein	gnl\|CDD\|306677	pfam00211, Guanylate_cyc, Adenylate and Guanylate cyclase catalytic domain.	5.45774e-72
NC_018683.1\|WP_014531860.1\|619004_620765_-\|hypothetical-protein	gnl\|CDD\|227903	COG5616, COG5616, Predicted integral membrane protein [Function unknown].	3.69409e-31
NC_018683.1\|WP_014989880.1\|607723_608359_-\|response-regulator-transcription-factor	gnl\|CDD\|226932	COG4566, TtrR, Response regulator [Signal transduction mechanisms].	8.38724e-86
NC_018683.1\|WP_014528407.1\|613428_614619_-\|PLP-dependent-transferase	gnl\|CDD\|223699	COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism].	1.57309e-128
NC_018683.1\|WP_014989884.1\|612809_613151_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|223672	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown].	8.28336e-16
NC_018683.1\|WP_041169521.1\|608363_610412_-\|PAS-domain-containing-sensor-histidine-kinase	gnl\|CDD\|226654	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].	6.66834e-36
NC_018683.1\|WP_153444958.1\|635124_635763_+\|NapC/NirT-family-cytochrome-c	gnl\|CDD\|131216	TIGR02161, Cytochrome_c-type_protein_NapC, periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family. Nearly every member of this subfamily is NapC, a predicted membrane-anchored four-heme c-type cytochrome that forms one component of the periplasmic nitrate reductase along with NapA, NapB, NapD, NapE, and NapF subunits. A single known exception at this time is NirT, which is instead a component of a nitrite reductase. This family excludes TorC subunits of trimethylamine N-oxide (TMAO) reductases.	1.80471e-119
NC_018683.1\|WP_014528409.1\|615633_616623_+\|zinc-dependent-alcohol-dehydrogenase-family-protein	gnl\|CDD\|176233	cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.59654e-173

>NC_018683.1|WP_014528410.1|617291_617639_-|hypothetical-protein
MNKFLLMTAGLLLMPLPALSQSAPDSGSRDPGSMQDREIEDLLRSITDEVSGGSGGPRRGAAFLLRSGDATVAVRCDPRESMKDCVDLTTSLLEKARSAMPTGGGAPGTAPPPRP
>NC_018683.1|WP_017266314.1|617101_617251_+|hypothetical-protein
MVAKTLDVTPQAARRIVLELGLREIALVTVDDAASQVLRIVNTLQECFR
>NC_018683.1|WP_014528409.1|615633_616623_+|zinc-dependent-alcohol-dehydrogenase-family-protein
MPTMRAAVVEAANGPFRVSDLEHPVPKSGEVLVRIKASGVNPLDTKIRAGAAAHARHQLPAVLGLDLAGIVEDVGGGVTRFSPGDEVYGMTGGVGGHQGSLAQYAAVDERLLAIRPSNLSMREAAALPLIFITAWEGLVDRVNARAGQTVLVLGAGGGVGHIAVQIAIALGADVYGVDSTSKGDYLRSLGATAIDYSSEEVESYVARHSGSKGFDVVYDTVGGAGLDTAFKAVARFGHVVSCLGWGTHALAPLSFKSATYSGVFTLIPLLTGEGREHHGDIMREATKLVEAGKVSPRLDPRTFTLETAANAHELIEHRKANGKLVIDVD
>NC_018683.1|WP_014989885.1|614668_615385_-|hypothetical-protein
MNKLLDKVMVAHGSPSRWNDHQVVRAAALIAGDLCGNGVSGTTRQITVYPHLARALVEPSGSLSCRSDLVANRLSIIREDGTVISEIEDVRTMPMNYDPKARTDKVFGAFLACCTVRTLLTTPFLLAMNGVEVNELVPWNEDGHRWRVLRTEFPPGFDTAARVHDFFFGGDFLLRRHDYHVDGDTGITITELVSDYVDNHGIRMPRKLRGYRRCSDLNPDLARVLISIDISTLEFSAT
>NC_018683.1|WP_014528407.1|613428_614619_-|PLP-dependent-transferase
MKDLTRCVVTPKVDTEGFVALGAGVYRASTIVFENAEAYANRGKRGPDGYSYGLYGTPTTRTLEAKLTVLEQGVRTFLLPSGQAANAIAMLPFLRAGDGVLLADSVYPPVRDFANTDLARFGVEVGYYDPADPSDLEARLNDRTKIVWCESPGSTTMEVQDLPRIADIAHRYGALLGCDNTWATPLNYKPLSLGADIVTEGLTKYISGHSDVLLGSLTVRDEQLTAPIRSTLGRLGICVSPDDASLVLRGLETLGVRMRHASEGALQLISRIQAADIVDRVLHPALPTSPGHSIWKRDFLGSSGVFGIVFKEGLSRHVAPSLDVLKTFAIGASWGGTRSLIAPMPVKAYRSVTQWDGDDLILRLSVGLEDHQDLVEDVDALLKEISARRSAWTIPR
>NC_018683.1|WP_014989884.1|612809_613151_+|carboxymuconolactone-decarboxylase-family-protein
MSMIDWNSYHDQVLAGVGELASLNPDVIRGYQAIGGAARKSNLLGSKVNELIALAAAVSLRCDGCIVVHTDAALKAGATREEIAEALGTAIGVNAGAGLVYSTRVMDAVKSKS
>NC_018683.1|WP_020479730.1|611862_612780_+|MBL-fold-metallo-hydrolase
MAASTFAVSGGWLSPRQAFAKAQGIVDMIRDEAAKAPIKVHEVRAGVAILEGSGGNIAVLTGEDGKLLVDGGITASRLRILDALAGLGKQPVMHLINTHWHFDHTDGNEWLNAEGAVILAHENTKKRLMTIQRVDDWDFEFPRPPLAAVPSETVGDETSLKLNKSTLMLKHHPNAHTDGDISVTFREANIVHTGDLYWNGIYPFIDYSTGGGIDGKIRAVEEILSRVTDETIVIPGHGQPLSKKSELSDYRTMLVDIRGNVARLKAEGKPIDEVIAAKPTEQFDAKWGQFVIGPEFFTRLVYHGV
>NC_018683.1|WP_017274532.1|610917_611742_+|alpha/beta-hydrolase
MGTITTRDGTQIFYKDWGKGQPVVFHHGWPLSADDWDNQMLFFLGKGYRVIAHDRRGHGRSTQTATGNDMDTYAADVAELAEALDLRDAIHVGHSTGGGEVTRYVAQHGKGRVAKAVIISAIPPVMLKSDSNPGGLPIEVFDDLRAQLAANRAQFYLDVPTGPFYGFNREDAKVSPGLIQNWWRQGMIGGAIAHYECIKVFSETDFTQDLKKIDVPVLVMHGDDDQIVPIADAALLSIKLLKHGTLKVYKGLPHGMCSTHPDIINPDLLAFFQA
>NC_018683.1|WP_041169521.1|608363_610412_-|PAS-domain-containing-sensor-histidine-kinase
MLIKRRHLAVAAALLLIAVCALIVFVQASGSAGLTRPAAFLLSALAIVWLADLWRRRIDTDEHLNNAKLIVESMPGLGWATDAMGKFVYVNPSVVEYVGKRTDEFNETGRTGLEAVHPDDAERVTEAWLTSMRTGTSFQSIHRIRRADGEYRWFQAYGRPHFDAQGDILGWFGTTIDVDEKKRAEQRLAESERQLRTLIDTMPVMIWCGSPSGEPIYQNPKTLEYLGATFEEIKENNFGVVHPDDAEGFQSAWADCVERKASLSLICRLRYKDGTHRWNRIDAAPLLGEDGEIIEWYGTNVDIEELHQTQEELRSNAERLKLMLDTLPAFVWCASPEGQPTYFNEPLMKYSGVTLEELRGVDGSGFAPMISNLVHPADAPFLRDRFEQSFKSGEPIALKYRHRLADGNYHLVDCRARALRDRQSRLFQWYGVIVDVEDEAQAQAQLQKAQHQLELATRAASLSELSASIAHELNQPLVAVTTNSSATAQWLSATPPNIDRARSSAKKAADAASDAAEVISRIKALFRQSGGAKYPGDINEVILEACTLLRERIAGSKCDLRTHLEPNLPNATFDKGLILQVVVNLVQNAMDAMATLNGAVRLLEIRSRFENGKILVDVRDSGVGLQDAEKIFEPFYTTKHNGMGIGLSICRSIVGAHAGTLWASPSEPSGTVFTFALPLSGG
>NC_018683.1|WP_014989880.1|607723_608359_-|response-regulator-transcription-factor
MSHGDHAVFVIDDDKRVRDGLSELLESRGIGVTTFASAREYLKAPKPENPSCLVLDVRLPDIDGFELQARLANEPHPPIVFITGHGDIPMTVRAMKLGAVDFLAKPFRDHELLAAIQTALERDREARRDRSVFNELQGRLNRLSARERDVLPLVVSGLMNKQGAAELGISEITFQIHRGNLMRKMHADSLADLVRIATKLGIPITHSRHGN
>NC_018683.1|WP_014531860.1|619004_620765_-|hypothetical-protein
MVHADQQGVPVDPATALPTEAEVLAQLDRIRFSTEFDAPERARQFLAYVVGETIAGRADRIKAYSIATEVFGRDSSFDAQTDPAVRIEAARIRRALERYYLVEGHNDPLIINMPKGAYVPTFERRIKVHTEPDPGLFVSVRRNSPFGSSRQPWAWVAIAALAFALGSLAANALLRSITPAESEDMAGFRPNIPKLAVMPFEDLTGTPHSAMITRGFTDEVVDKIARFKEIIVVSREKLDGSPDQADAPAYALEGRVRLDGEKLRLAIRLVQRSDGSVVWANNYDESLATHKIIALQEKAAAAVATAVAQPYGVVFQANAVRFTRSVPDDWEAYACTLAYYGYRSNLSPLTHSSVQECLQQATRQFPNYATAWALLSMTYIDELRFQYRLERSSPISLEHAVAAAARAVELDSQDVRALQAEMLTLFFRGEVDAALAVGARAFAINPNDTELAGEYGFRRALSGQWRSGCELVSQTVERNPGPVGYFEAALAICSYIESDYVAAERWARLADLRANPIYRVILLAILGKLGKEEQAKEEQNWLETNVPGFLENIRKEIALRIRRPEDQQHFIEGLREAGVTIPEGGA
>NC_018683.1|WP_017265939.1|623177_623534_+|BA14K-family-protein
MSPARAQTCIGICNGGTGGSTNHNLFIEREYRDFLQQRYPNYGSRYRGMRPDISIGPGATVGGPRPGVRQQFRLRQRRVIDANKHLRWCQERYLSYRLADDTFQPFEGARRPCNSPYN
>NC_018683.1|WP_041169465.1|623795_625880_-|HAMP-domain-containing-protein
MAAKLFTILVLLGAIAVLVTGVLGYFRARDALEKAVFDQLTAARQTKTRQVEDYFRTIDAELRLLASSKMAVDATREFRIVVDQLDRAGAPPELRQKVGTWYTENFIPGITRVLGRKPVLADYLPVGAAPYYLQYHYIVANPHPAERRKLLDDAGDGSEYSRLHAMYHPMMRAAAATLGFFDFMIADPKSGRLIYTVEKEVDFTTSLQAGPYRHSNAAAAAARCAASPDRSAVCLEDFAPYAPSGGAPIAFMGAPVIDRGVVIGVLIAQLSNEEIDNVVTGGRRWRQEGFGDTGEAYLVGPDYLVRSGPRAFYEDRENYFAELKSVGAPGEEIAAIERYGTPVQHQRINTKATQAALAGVEGTGEIVGYRGVPTLASWGPLAIPGIKWGLVAKIDSAEAFAPIERLRQDLLVVGGLALLVVAATGAWLSRALLGPLRELTAGVRRFAAGDYRASVPVRTHDEIGQLCSAFNGMVEDLHQKNVVIENKNRENEQLLLNVLPAPIANRLRGGEEAIADGFAEVTVAFADLVGFTELTSEMPPHDVVTLLNELFTRFDAAAHDLGIEKIKTVGDAYMAVCGLPEPVANHAERMVRMAIRMVHITREHGMEHNASMKLRVGINTGPVVAGVIGTSKYIYDLWGDTVNLASRMESGGIPDSIQVTRSVYEKLKGQFAFEPRGAIEVKGKGKVEAWVLRL
>NC_018683.1|WP_014528416.1|628206_628554_-|hypothetical-protein
MKRPAFSTAVSLSLLALVSSRVNLSHAAEPTFAILQGMCRNTKDPLQQGYCTGFIEAIAIRIARDGKNCAFLQDYIDHANADLALSDLIADLNPAEYSEKAFDAVEKFFYNKGCS
>NC_018683.1|WP_127570217.1|628881_629388_-|hypothetical-protein
MYFETFLAECWKNGNRIGRHLLYDIKNRGYTGSRTNLERLLKVWREAKNIQPGEPPPDMDVSEPVRDPDTGHMISSVVAAALCIKPRGMLTDRQARKVNALKQGSTVFAIMRGLAMRFKGVLRSRNSEALAKWIDDAIETELTATCVSPAFCAGILMPSKMQSNSLGG
>NC_018683.1|WP_014528417.1|631390_631843_+|DUF2721-domain-containing-protein
MNTPPIVTDLASVVQTSLAPVFLLAGTAGFVSIYTIRLGRVSDRLNEVADKGNQGKLFRMQLAYLRRRALALEVAVVLGVIAGICTGGAILNLLAGALAIGLRQENLFWFFGGAIVSLIGSLVAFLFELLIAGRNMLRQIRMDQIPTGQD
>NC_018683.1|WP_014531840.1|633657_634005_-|hypothetical-protein
MIIYVAEISGRGIAAFDAANDIEAQAQLANRGLLRDLIVLQNEGRALWDGVAEIHVRMATPEETEIWQTSRAAVQSGEDSDDEGRHVFLVPVVDPSHDNFDDDDNPHHDDDRDGD
>NC_018683.1|WP_153444958.1|635124_635763_+|NapC/NirT-family-cytochrome-c
MVWKILTTPAATLSLAFLTLGGFVGGVIFWGAFNTALELTNTEEFCVSCHEMRANVYEELTRTVHFSNRSGVRASCPDCHVPHEWTDKIARKMQASKEVWGKIFGTINTREKFLDHRLELAKHEWARLKANDSLECRNCHSSAAMDLSKQTQRAAEIHTRYLLPGKATCIDCHKGIAHELPNMQGVEPGWKLPPELEGETLPSASAIDDLKR
>NC_018683.1|WP_014989899.1|636246_636726_+|hypothetical-protein
MRATWAIPVAALVLLLDSSDATAGQPGKSADQPSKYVPSVGEIMNKIDLSRSKLWYSVKLRNWALAGYQLDQVKTGFDDVSRHHPDKSNFDFANAQKIANLIEEAIVARSDEQFQQSFALMTTECNDCHRAVGKPFLHVGAPKIPSPYSDKMLEPGAFR
>NC_018683.1|WP_010967341.1|636783_637419_-|helix-turn-helix-domain-containing-protein
MNTSISASWGRYINAIPPRSGEAALAPLSSFVDGQCIYSFGERADQVYQVEFGAVRVYRLAANGRRQILAFHFGGNWFGLQSRDRHSSNAEAIGVTGVRCISLQEEPLFRPALFSAALDNVSAAQEHQLVIGRQSAIERVAAFLLEMSERSGYSRRFELSMSRVDVADYLALTVETVSRSLTKLKHRGFIELHGARGIELVGYRALQNLCL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_018683_1	1.1\|618048\|58\|NC_018683\|CRISPRCasFinder	618048-618105	58	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	709941-709998	0	1.0
NC_018683_1	1.1\|618048\|58\|NC_018683\|CRISPRCasFinder	618048-618105	58	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	618048-618105	0	1.0
NC_018683_1	1.1\|618048\|58\|NC_018683\|CRISPRCasFinder	618048-618105	58	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	534472-534529	0	1.0
NC_018683_1	1.1\|618048\|58\|NC_018683\|CRISPRCasFinder	618048-618105	58	NZ_CP019483	Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence	320258-320315	0	1.0
NC_018683_1	1.1\|618048\|58\|NC_018683\|CRISPRCasFinder	618048-618105	58	NZ_CP019486	Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence	295298-295355	0	1.0
NC_018683_1	1.1\|618048\|58\|NC_018683\|CRISPRCasFinder	618048-618105	58	NZ_CP009145	Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence	1180665-1180722	0	1.0
NC_018683_1	1.1\|618048\|58\|NC_018683\|CRISPRCasFinder	618048-618105	58	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	1086301-1086358	0	1.0
NC_018683_1	1.1\|618048\|58\|NC_018683\|CRISPRCasFinder	618048-618105	58	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	1186250-1186307	0	1.0
NC_018683_1	1.1\|618048\|58\|NC_018683\|CRISPRCasFinder	618048-618105	58	NZ_CP021794	Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence	275823-275880	0	1.0
NC_018683_1	1.1\|618048\|58\|NC_018683\|CRISPRCasFinder	618048-618105	58	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	7342-7399	0	1.0
NC_018683_1	1.1\|618048\|58\|NC_018683\|CRISPRCasFinder	618048-618105	58	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	819905-819962	0	1.0
NC_018683_1	1.1\|618048\|58\|NC_018683\|CRISPRCasFinder	618048-618105	58	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	347456-347513	1	0.983
NC_018683_1	1.1\|618048\|58\|NC_018683\|CRISPRCasFinder	618048-618105	58	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	403311-403368	1	0.983
NC_018683_1	1.1\|618048\|58\|NC_018683\|CRISPRCasFinder	618048-618105	58	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	347117-347174	1	0.983
NC_018683_1	1.1\|618048\|58\|NC_018683\|CRISPRCasFinder	618048-618105	58	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	373772-373829	1	0.983

1. spacer 1.1|618048|58|NC_018683|CRISPRCasFinder matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

2. spacer 1.1|618048|58|NC_018683|CRISPRCasFinder matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

3. spacer 1.1|618048|58|NC_018683|CRISPRCasFinder matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

4. spacer 1.1|618048|58|NC_018683|CRISPRCasFinder matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

5. spacer 1.1|618048|58|NC_018683|CRISPRCasFinder matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

6. spacer 1.1|618048|58|NC_018683|CRISPRCasFinder matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

7. spacer 1.1|618048|58|NC_018683|CRISPRCasFinder matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

8. spacer 1.1|618048|58|NC_018683|CRISPRCasFinder matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

9. spacer 1.1|618048|58|NC_018683|CRISPRCasFinder matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

10. spacer 1.1|618048|58|NC_018683|CRISPRCasFinder matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

11. spacer 1.1|618048|58|NC_018683|CRISPRCasFinder matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

12. spacer 1.1|618048|58|NC_018683|CRISPRCasFinder matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 1, identity: 0.983

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgttcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
******************.***************************************

13. spacer 1.1|618048|58|NC_018683|CRISPRCasFinder matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 1, identity: 0.983

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcaccgcggtcgccgatcagttccatcagg	Protospacer
******************************.***************************

14. spacer 1.1|618048|58|NC_018683|CRISPRCasFinder matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 1, identity: 0.983

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgttcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
******************.***************************************

15. spacer 1.1|618048|58|NC_018683|CRISPRCasFinder matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 1, identity: 0.983

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgttcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
******************.***************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_018700_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018700_1

727068-727181

Orphan

Consensus_repeat	Method
CGGAGAGGCAGGCCCGTACGGACTCCCGCCGGGAGAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018700_1

>merge|NC_018700|1|727068-727181|CRISPRCasFinder
CGGAGAGGCAGGCCCGTACGGACTCCCGCCGGGAGAAAGGCGGCGAAGGGCCGGTCTATCCGAACATGTGAATGTCCGGAGAGGCAGGCCCGTACGGACTCCCGCCAGGAGAAA

>NC_018700|1|1|727068-727181|CRISPRCasFinder
CGGAGAGGCAGGCCCGTACGGACTCCCGCCGGGAGAAA	GGCGGCGAAGGGCCGGTCTATCCGAACATGTGAATGTC
CGGAGAGGCAGGCCCGTACGGACTCCCGCCAGGAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_018700.1\|WP_010968997.1\|722905_723766_-\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|381680
NC_018700.1\|WP_003527346.1\|720843_722133_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341030
NC_018700.1\|WP_003527345.1\|722397_722553_-\|hypothetical-protein	unknown	unknown	unknown
NC_018700.1\|WP_013844144.1\|716815_719470_-\|aminopeptidase-N	unknown	unknown	gnl\|CDD\|237585
NC_018700.1\|WP_013844143.1\|714134_716462_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NC_018700.1\|WP_003527321.1\|735998_737501_-\|AMP-nucleosidase	unknown	unknown	gnl\|CDD\|236222
NC_018700.1\|WP_010969000.1\|727626_728625_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270359
NC_018700.1\|WP_015007347.1\|730936_731338_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NC_018700.1\|WP_010968996.1\|719895_720834_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NC_018700.1\|WP_010968993.1\|711163_714124_+\|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase	unknown	unknown	gnl\|CDD\|237612
NC_018700.1\|WP_003527320.1\|737580_737901_-\|YnfA-family-protein	unknown	unknown	gnl\|CDD\|224656
NC_018700.1\|WP_015007346.1\|728845_729733_+\|proline/glycine-betaine-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226644
NC_018700.1\|WP_010969003.1\|731476_732403_+\|diacylglycerol-kinase-family-lipid-kinase	unknown	unknown	gnl\|CDD\|224513
NC_018700.1\|WP_010968998.1\|723838_725128_-\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|212673
NC_018700.1\|WP_010968999.1\|725397_727062_+\|electron-transfer-flavoprotein-ubiquinone-oxidoreductase	unknown	unknown	gnl\|CDD\|223717
NC_018700.1\|WP_010969001.1\|729822_730836_-\|zinc-binding-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|274313
NC_018700.1\|WP_003527344.1\|722590_722767_-\|hypothetical-protein	unknown	unknown	unknown
NC_018700.1\|WP_010969004.1\|732418_733906_-\|glycosyltransferase-family-39-protein	unknown	unknown	gnl\|CDD\|224720
NC_018700.1\|WP_003527322.1\|735013_735970_+\|flippase-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|377103
NC_018700.1\|WP_015007348.1\|733898_734918_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133030

Protein	Function_ID	Function_description	E-value
NC_018700.1\|WP_010968997.1\|722905_723766_-\|uracil-DNA-glycosylase	gnl\|CDD\|381680	cd10030, UDG-F4_TTUDGA_SPO1dp_like, Uracil DNA glycosylase family 4, includes Thermotoga maritima TTUDGA, Bacillus phage SPO1 DNA polymerase, and similar proteins. Uracil DNA glycosylase family 4 includes Thermotoga maritima TTUDGA, a robust uracil DNA glycosylase that shares narrow substrate specificity and high catalytic efficiency with family 1, acting on double-stranded and single-stranded uracil-containing DNA. Members of this family possess four conserved cysteine residues required to coordinate the [4Fe-4S] iron-sulfur cluster. This family also includes the N-terminal domain of Bacillus phage SPO1 DNA polymerase. Bacteriophage SPO1 is one of a group of large, lytic, tailed bacteriophages of Bacillus subtilis, and contains hydroxymethyluracil (hmUra) in place of thymine in their DNA. It has been speculated that this UDG domain may help discriminate between hmUra containing SPO1 DNA and thymine-containing host DNA. Uracil-DNA glycosylases (UDGs) initiate repair of uracils in DNA. Uracil in DNA can arise as a result of mis-incorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations. Thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other.	2.76855e-63
NC_018700.1\|WP_003527346.1\|720843_722133_-\|MFS-transporter	gnl\|CDD\|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.41852e-81
NC_018700.1\|WP_013844143.1\|714134_716462_-\|PAS-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.74445e-54
NC_018700.1\|WP_015007346.1\|728845_729733_+\|proline/glycine-betaine-ABC-transporter-permease	gnl\|CDD\|226644	COG4176, ProW, ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism].	4.36406e-138
NC_018700.1\|WP_003527321.1\|735998_737501_-\|AMP-nucleosidase	gnl\|CDD\|236222	PRK08292, PRK08292, AMP nucleosidase; Provisional.	0
NC_018700.1\|WP_010969000.1\|727626_728625_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270359	cd13641, PBP2_HisX_like, Substrate-binding domain of ABC-type histidine transporter involves in betaine and proline uptake; the type 2 periplasmic-binding protein fold. This subfamily is part of a high affinity multicomponent binding-protein-dependent transport system specific to certain quaternary ammonium compounds for osmoregulation. The periplasmic substrate-binding domain, which is often fused to the permease component of the ATP-binding cassette transporter complex, is involved in uptake of osmoprotectants (also termed compatible solutes) such as glycine betaine, proline betaine, choline, and carnitine. Many microorganisms accumulate these compatible solutes in response to high osmolarity to offset the loss of cell water. This domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.87733e-106
NC_018700.1\|WP_015007347.1\|730936_731338_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	8.18039e-42
NC_018700.1\|WP_010968996.1\|719895_720834_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.33806e-16
NC_018700.1\|WP_010968993.1\|711163_714124_+\|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase	gnl\|CDD\|237612	PRK14108, PRK14108, bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase.	0
NC_018700.1\|WP_003527320.1\|737580_737901_-\|YnfA-family-protein	gnl\|CDD\|224656	COG1742, COG1742, Uncharacterized conserved protein [Function unknown].	3.23612e-41
NC_018700.1\|WP_010969003.1\|731476_732403_+\|diacylglycerol-kinase-family-lipid-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	4.46621e-74
NC_018700.1\|WP_010968998.1\|723838_725128_-\|Hsp70-family-protein	gnl\|CDD\|212673	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins. This bacterial subfamily includes the uncharacterized Escherichia coli YegD. It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. YegD lacks the SBD. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some family members are not chaperones but instead, function as NEFs for their Hsp70 partners, other family members function as both chaperones and NEFs.	0
NC_018700.1\|WP_010968999.1\|725397_727062_+\|electron-transfer-flavoprotein-ubiquinone-oxidoreductase	gnl\|CDD\|223717	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion].	1.40481e-104
NC_018700.1\|WP_010969001.1\|729822_730836_-\|zinc-binding-alcohol-dehydrogenase-family-protein	gnl\|CDD\|274313	TIGR02817, Putative_oxidoreductase_transmembrane_protein, zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. [Energy metabolism, Fermentation].	0
NC_018700.1\|WP_013844144.1\|716815_719470_-\|aminopeptidase-N	gnl\|CDD\|237585	PRK14015, pepN, aminopeptidase N; Provisional.	0
NC_018700.1\|WP_010969004.1\|732418_733906_-\|glycosyltransferase-family-39-protein	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	4.60612e-52
NC_018700.1\|WP_003527322.1\|735013_735970_+\|flippase-like-domain-containing-protein	gnl\|CDD\|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	8.0146e-08
NC_018700.1\|WP_015007348.1\|733898_734918_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	1.38072e-70

>NC_018700.1|WP_010968999.1|725397_727062_+|electron-transfer-flavoprotein-ubiquinone-oxidoreductase
MTEQQELPERESMEFDVVIVGAGPAGLAAAIRLKQVSPELSVVVLEKGAEVGAHILSGAVVDPIGIDRLLPGWRDEPDHPFKTEVTDDQFLFLGPAGSVRLPNFLMPPLMNNHGNYVVSLGNVCRWLATQAEALGVEIYPGFAATEVLYNDEGAVIGVATGDMGIERNGEPGPNFARGMELLGKYTLIGEGVRGSLAKQLIAKYKLDAGCDVPKFGIGLKELWEVKPENHKPGLVQHSFGWPLGMKTGGGSFLYHLEDNLVAVGFVVHLNYKNPYLYPFEEFQRFKTHPAIRGTFEGGKRLSYGARAITEGGYQSVPKLSFPGGALIGCSAGFVNVPRIKGSHNAVLSGILAAEKLAAAIADGRANDEPIEIERGWRESAIGQDLKRVRNVKPLWSKFGTAVGVALGGLDMWTNQLFGFSFFGTLKHGKTDAQSLEPAAKHERIDYPKPDGVLTFDRLSSVFLSNTNHEEDQPVHLQVKDWDLQKRSEYEVYAGPSSRYCPAGVYEWVEKDGQQTFVINAQNCVHCKTCDIKDPNQNINWVPPQGGEGPVYPNM
>NC_018700.1|WP_010968998.1|723838_725128_-|Hsp70-family-protein
MASALGLDFGTTNSVLAQTEGASTRSIVVESPTGRSDTTRTALSFLKDAGPSPLKVEAGQAAIREFIDNPGECRFLQSIKTFAASALFQGTLIFGKRYEFEDLMQRFLTRLRDYAGNNWEATFRRVVIGRPVHFAGANPDEKLALERYNRALTRMGFPEVHYVYEPVAAAFYFARNLDRDATVLVADFGGGTTDYSIIRFESQAGRLTATPIGHSGVGIAGDHFDFRIIDNIVSPLIGKGSLFKSFDKLLEVPSSYYANFGRWNQLSIFKTLRDFTELKKLVRASLEPEKLESFVELIEHDEGYPLYQAVSATKMRLSQAEETEFAFAPLGERARRTVRRDEFEGWIAPDLARIEEALDEVLSTTATTPDGIDKVFLTGGTSFVPAVRRLFENRFGKERIESGGELLSIAHGLALIGERDDIAAWTAAA
>NC_018700.1|WP_010968997.1|722905_723766_-|uracil-DNA-glycosylase
MISANDLSRSELAALLAFHAEAGVEWLLEEEPVDRLAEFEAMKSRRAQSRAVPQTGATAAEPQQSAPPAAARERRPAPPAPPPVVAIPDEQAIKEAQFVADAARSLGELRTAMEAFAGCNLRNSARNLVFAEGSAASGVMIIGPMPYADDDRDGRPFAGRHGEMLERMLSGIGLSREDVLLANAVPWRPPGNRVPSAREADICRPFIERQIALAEPKQLLLLGNFTARFFFGGETIHQLRGEWRELTFGGTSIPTLATLHPQDLVAAPINKRFAWLDLLAFKSRLG
>NC_018700.1|WP_003527344.1|722590_722767_-|hypothetical-protein
MTARYRPIHSSFETLRYAGASSRTPFNSFGSAANEQLTAIGLARTTRPAQIFAEFIQR
>NC_018700.1|WP_003527345.1|722397_722553_-|hypothetical-protein
MSKPLDSIRALVDTISDIRTAVRASREYSRLSIASDGRRVHDGAASRLLPS
>NC_018700.1|WP_003527346.1|720843_722133_-|MFS-transporter
MLANFASVFSLMLSTFLMMVAFGLQSYVIPVRSVAESWSTLTISIFATGYTLGFTLSCIVTPKFVLRVGHVRVFTALITLLSIAILMCGLVVDWRAWIGFRAVSGFAIAGSYLVIESWLNERVTNENRGLLFSLYLITTMVGTIGGQYLVPLGDPSNTSLFILCGVLFSLALLPTALSSSPMPAPPARANFDIPALYRRSPVAVVGGFLAGALSGAWLNLGGVFTQKIGLSTGEGATLLASLLAGSAISQVPIGRASDRMDRRIVMVACGIAGVVSCLAMSVSIASSPPVLYALAACIGTVLFPIYALNVAHANDLARPDEYVEISSGLMITYGLGTISGPLMVGPVMDRFGPVALFIALAVYFALYSGYAAWRILQREQHDGLVAKTDFQATTVLPTPGPDVTGPLAQQDAGELIEDDTVPAWEQRAE
>NC_018700.1|WP_010968996.1|719895_720834_+|DMT-family-transporter
MDADDASPMKGIVLKVLSVVVFVCMSTCIKAAGDDIPTGQITFYRSAFAMVPILGFLACRGALRDAFRTTDITGHLVRGFVGILAMSCGFYGLVHLPLPEAIAIGYAMPLLAVAFAAIFLGEIVRLYRWSAVFVGLAGVFIITWPRLTLFNEGGFGSAEAMGAVAVLLSAALGATAMVLVRKLVQKERTHTIVLYFSLSAAVFSLATLPFGWSELSWQAFVLLTIAGFCGGVGQILLTESYRHADMSTIAPFEYTSIVLGIVIGYFLFGDVPTATMLAGTAIVVGAGIFIIYREHRLGLERKGARKHVTPQG
>NC_018700.1|WP_013844144.1|716815_719470_-|aminopeptidase-N
MRTNTGQIVHLENYRPTDFVLERVDLTFELDPRETKVEARMIFHRREGVSPSAPLVLDGDELTMTGLLLDQVAVPGTLYEATDDTLTIRGLPEAAPFEITVTTALSPETNTKLMGLYRTSDVYCTQCEAEGFRRITYFPDRPDVLAVYTVNIIADKASAPLLLSNGNYLGGADMGDGRHFASWFDPHPKPSYLFALVAGDLGVVEDAFTTASGRDVALKIYVEHGKEPRAAYAMDALKRSMKWDEEVFGREYDLDIFMIVAVSDFNMGAMENKGLNIFNDKYVLADPETATDADYANIEAIIAHEYFHNWTGNRITCRDWFQLCLKEGLTVYRDHEFSADMRSRAVKRIAEVRHLKSEQFPEDAGPLAHPVRPTQYREINNFYTTTVYEKGSEVTRMIATILGRDLFKKGMDLYFERHDGQAVTIEDFIACFEAASGRDLKQFSLWYHQAGTPLVTASGTYDAARQTYTLSLEQTVPPTPGQSSKAPMHIPLRFGLLLPDGSEARPSAVSGAEITGDVLHLTERKQTVTFSGIPSEPVPSFNRGFSAPVNLHLTQSAEHRALIARHETDLFARWQALNAMALDNLVKAAAEARTGQPIDCDDALVDALLAAAGDDRLEPAFRSQVMSLPSETDIGREIGSNNDPDAIYAGRQAILAAIATAGKDTFARLVNEMSLSGPFRPDADSAGRRALRNSGLSYLVYADGSPDKAADAFSSANNMTDLSQALTLLAHRFPDARETADALAVFKKRFADNALVIDKWFAIQATIPGASTLDRVRALMSDPLFNASNPNRVRSLVGTFAFANATGFNRIDGEGYRFLARQILDIDTRNPQLAARILTSMRSWRSLEKIRAGHARSALEEIARASNLSADVSDIVDRMLKDEH
>NC_018700.1|WP_013844143.1|714134_716462_-|PAS-domain-containing-protein
MDKMADARRGSAAEGRLRLKFPGFSGLEREFIEQAKIFAEPASQKLAMAEPMLKRSIPVLIIAFLLIVAISRMSGIMDEHARMEASSRRTVSLAAAAAAGVFQTGGSELFAEGRRWEVERRLTEFLPAEILDAGIFLLTVRRDGRVFAGTQDGVHLIGRTLSAIAPEVATLQYYGEGASVVRASIDGTEHFIALRQLPDSGGAVLAATSIARFEAAWRDEISLNVTLFAGVSAILMVVLYAYYIQAKRTRDADAVFAESNLRVETALSRGRCGLWDFDLDNRRLFWSRSMYEMLGMQGDASVLSFGDAARLMHVEDRGIYRVARAIAKGNERQIDQVFRMRHADGHYVWLRARAQVIRTVSGRTHLIGIAMDVTEQHRLAQRYAEADQRLADAIECTSEAFVLWDKHDRLVMCNTHYQQAWQLPDHVLVPGTERTIVHAAAARPVVERRIADPDRSNHSQTSEVQLADERWLQINERRTRDGGLVSVGTDITLLKRHQVRLRESERRLMATIGDLSASRVTLEQQKAELSIANANYQAEKERAEAANRAKSEFLANMSHELRTPLNAILGFSEILQDQMFGPLGSEKYHEYSRDIFESGKHLLNVINDILDMSKIEAGHMRITRERIDLAPLIEETLRFTTIPAERKNIRVVQQISSGLTMFADRRAMKQVLLNLLSNAVKFTNEGGRISLRARKVRGAVTLTIADSGIGIPKGALQKIGQPFEQVQSQYAKSKGGSGLGLAISRSLTRLHGGTMKIHSAENVGTIISVRIPDRG
>NC_018700.1|WP_010968993.1|711163_714124_+|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase
MAEAIERSLSDIDVVAIRPASQADAKAALSVLKDAAKGSDHIAKLIASDAPLKDFLVAAFALSPFLRDTARSHPAILEALLSETLPAFLKRRIEAARVAWRGDAAGAALPDAEIMTRLRRAKREVAFAVALADLSRLFGGRETTGWLSDFAEAAVSAAIDHLLLGAHESGKFVLKDSSAPSTASGVVVLGMGKLGAGELNYSSDIDLVVFYDPQSSIITNRDDAPETFARLLRRLIRILQERTGDGYVFRTDLRLRPDPGSTPLAIPVEAAMLYYESRGQNWERAAFIKARPIAGDLEAGERFLKELTPFVFRKYLDYAAIADIHSIKRQIHAHKGHGEIAVKGHNIKLGRGGIREIEFFVQTQQLIAGGRTPALRLRQTETMLRMLAESGWIDGATAEELIEAYWFLRDVEHRIQMVHDEQTHLLPETEPELRRIAYMLGFEDTASFSNALSRVLRTVERRYAQLFEQEAKLSTETGNLVFTGQQDDPDTLETLKKLGFQRPSDIANIIRTWHYGRYRATQSVEARERLTELTPELLRVFGESRRADEAFLRFDHFLSGLPAGIQLFSLLGNNPGLLSLIVNIMSSAPRLADIIAAKPHVFDGMLEPGLLAELPTRDYLAPRIATFVGGGRHYEEVLDRLRIIAAEQRFLIGIRLLTGAITGLQAGRALTDLADLIIAAALDAVLEEVRSAHGRFPGGRVAIVGMGKLGSHELTAGSDIDLILLYDYDDEVLESDGAKPLDPVRYFTRVTQRLIAALSAPTAEGILYDVDMRLRPSGNKGPVATRITAFAKYQRTEAWTWEHLALTRARCICGDESLVGEAEAIFAEILTEKRDIAKIRKDVEEMRGLIDKEKPPKDIWDFKLIPGGLVDIEFIAQYLALVAPARGVTSPPAGTHTLEALKALGAGMMNANDLDTAAEALVLFTELSQLVRLCIDGDFDPKEAPAGLVDLVCRAGDYPDLTHLEADIRRLSKAVRRIFQGVVAAA
>NC_018700.1|WP_010969000.1|727626_728625_+|ABC-transporter-substrate-binding-protein
MKKLLATTCLAAGLLGLGSAASAAECGDVTIANMNWQSAEVLASVDKFILTEGYGCSAELVVGDTVPTITSMIEKGEPDIAPEGWVDLLPDVVNRGLQEGKLVGAAVALSDGAVQGWWVPKYIVDANPDIKTIDDVLKHKELFPDPEDPSKGAIFNGPQGWGGTVVTTQLYKAYGAEAAGFTLVDTGSAAGLDGSIAKAYERKQGWAGYYWAPTALLGKYEMVKLEHGVPNDMAEWKRCNTVADCPDPKKNDWPKDKVQTLVTKEFADRAGPAMEYLNTRAWTNDTVNKLMAWMTDNQASGEEGAKHFLEENPDLWTKWVSPEVAEKIKAAL
>NC_018700.1|WP_015007346.1|728845_729733_+|proline/glycine-betaine-ABC-transporter-permease
MEWLTKFPHMDDDRLRQLKKIIDEGFRSFTRAYGDAIESFFDPLQFFLIHAERFMTRTPWPIILILIAVIAWFASRNWKIVAGAIGTLLLIGYLDMWDDTMKTISMIFVCTVLSIAIGIPMGITMSRSDRFQNIVNPVLDVMQTMPSFVYLIPVVMLLGIGKVPGLIAVVIYAIPPMIRLTNLGIRLVDKDVLEAADAFGSSNWQKLKNVQMPLALPTIMAGINQTIMMALAMVVIASMIGVQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRVSQAYGRRLQRHREIIHG
>NC_018700.1|WP_010969001.1|729822_730836_-|zinc-binding-alcohol-dehydrogenase-family-protein
MRAVAYKTPQPIANETALIDVDLPVPTPGERDLLVEVRAVSVNPVDTKVRAGVQPEPEQLKVLGWDAAGVVKAVGPKVTLFKPGDEVFYAGAIDRPGTNAELHLVDERIVGRKPQSLDFAAASALPLTAITAWETIFDRLRVNDPVPGAANAVLIIGGAGGVGSIAIQLLRALTNVTVIATASRAETREWALKLGAHHVLDHSRPLAAEIEQLALGAPAFVFSTTNTDKHVDEIVKLIAPQGRFALIDDLAVLDVTPFKRKSVSIHWEMMFARPLFGTPDMIEQHNLLNRVAELVDGGKIRTTLTETLGPIDAATLRKAHQMIETGRTRGKLVLAGF
>NC_018700.1|WP_015007347.1|730936_731338_+|helix-turn-helix-transcriptional-regulator
MSRPRAKLTNTFPGCPVESALSFIDGKWKGVILYHLMSEGVLRFNELRRRLPSVTPRMLTRQLRELEEAALLSRTVFPVVPPRVDYALTARGESLKPVIMALKAWGDENVLCDGDSMTLKPLESRSRPELKRA
>NC_018700.1|WP_010969003.1|731476_732403_+|diacylglycerol-kinase-family-lipid-kinase
MKVKAIFNRDGGTFRTTDMDAYSRKVEEDFRAAGHEIEIAVVGADEMRDTLETACGRGDLDAIVAGGGDGTISAAAGVAWKTGMPLGIVPAGTMNLVARSLKLPLDIWKVPEVLANGRIIDADIGSADGRAFVHQFSMGLHARMVRYRQSYRFASRLGKISASTRAAIGVIFNPPDFEIEFDADGHRERRHVSAISVSNNHFGHDTLMYAEDLTSGHLGFYTAPPLSPAGVAKLSFDILRGKFRSSTLITEMSALTVDLHFPKMDRKINCVIDGELVPIRSGRVALRVHPGELKLLVGSQESNAGKTV
>NC_018700.1|WP_010969004.1|732418_733906_-|glycosyltransferase-family-39-protein
MLEAVNRRPGAAVLAVAGYFLLCIILRVSVSSSLEIDEAEQAFLSQFLALGYGPQPPFYNWLQYGLAELIGPSLATMTILKNGLLFLCCLFYGLAARLVLADRRLPPIAMLGVLTLPPVFLLAQRDLSHTIAALFAVSLFLYGFLRTLKRPSLFSYLLTGVAVGIGLMAKYNFVLVPVAAIVAVLPERELRARILDWRILPAIAIATLIVLPHAYWMLQNFGFASGGTLNEMREREAEGLLLQAFYGVYSLGSAIIGGSLGPLLVFGLVFRGKLRAIWQAESQWSRIIGRMLALCLIAVLLVVLGVAATHVREKWLVLFLVLIPLYLCLKIEAANIDLTDSLRRFFLLVCVIALGALVMVSARAVVRPWFGDYSRLNIPYAAFAEAVAQAEGGQPALILANDKQIAGNLRTQFSRAQVTMPRPSNALPVDMSRRPLLLVWHDDAQPEAPVPDLLRNALSELGVPGAAAAPRHLALPYLYGTGSDRYGFSYIWVAE
>NC_018700.1|WP_015007348.1|733898_734918_-|glycosyltransferase-family-2-protein
MNRIEEPVKPMTEVLEGVELSIVVPVFNEEESVGPLVTRIRVAMAGFLKSWELILVDDGSTDRTLPNARKELSNPDLQLKIIELQKNFGQTAAMQAGIDAASGRLIATLDGDLQNDPADIPNMVAAIEERGLDLLVGWRQNRRDALILRKIPSWCANVLIGKITGVRLHDYGCSLKIYRGSIIKQVKLMGEMHRFIPAWVAGVVPSSRIGEMPVTHHARHYGTSKYGISRTFRVILDLLAVLFFMRYKARPGHFFGSIGLAAGGLSVLILLYLAIDKFILGNDIGTRPMLIVGVMLFLSSIQLITTGILSEMMARAYFRDDEVTSYIVRQTFEREQPHA
>NC_018700.1|WP_003527322.1|735013_735970_+|flippase-like-domain-containing-protein
MNTNWERSRRSWLARNRLALISAAAIAAYAIFVEWVWGWPVLLRQWAEIGVGPVLSALALLVATYFIRCYRIHDYFPGETRGRFLSLFRVTQVHNLLNIMLPFRAGETSFPLLMRSEFGVPLVRGTAALFVMRLLDLHALLTVAAVGLVAGRGQGAIGWVLWLIAFLSPLAFFLMKEKALTVMRRVAPAKAGPLLDEAEAGLPIGIPAFLRAWAMTMLNWAVKVVVLAWVLAIMGVAPLAASFGGALGGELSSVLPVHAPAGVGTYAAAIVAGAVSFGASADQATLETLGRASVNAHLMVIVSAVAGTMLSLLLRPKA
>NC_018700.1|WP_003527321.1|735998_737501_-|AMP-nucleosidase
MNKRISSNSVLSVATPEPFEPQLFDDPTEAVDCLEALYERNTRFLCEGFEGLGKSGRPLTRFRACYPQVSIETSSFGHVDSRLSFGYVSAPGVYTTTITRPKLFRHYLKEQLGHLMRNHGVGVTVSESSTPIPLHFAFGEGAHVEASAAESIDIPLRDLFDAPDLTTTDDEIANGSYEPGPGEPSPLAPFTAQRIDYSLARLSHYTATSARHFQNFVLFTNYQFYVDEFCAWARQQMAEGGNGYTAFIEPGNITTPAGADRPDADYSLARLPQMPAYHLKKKGHGGITLVNIGVGPSNAKTITDHIAVLRPHVWLMLGHCAGLRNSQRLGDYVLAHAYMREDHVLDDDLPVWIPLPALAEVQVALQDAVAEVTGYKGYDLKQIMRTGTVATIDNRNWELRDQRGPVKRLSQARAIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGELKLPGMASAFYRTQVSQHLKIGILALQKLAAMPPEKLHSRKLRSFYETSFQ
>NC_018700.1|WP_003527320.1|737580_737901_-|YnfA-family-protein
MPAYAIYFLAALAEITGCFAFWSWLRLGKSALWLIPGMASLALFAWLLTMVDAAAAGRTYAAYGGVYIVASLSWLWLAEGVRPDHWDMTGAAVALAGSAIILAGPR

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Crispr_ID: NC_018700_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018700_2

2112796-2112867

Orphan

Consensus_repeat	Method
CCTTCTCCCCGCCTGCGGGGAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018700_2

>merge|NC_018700|2|2112796-2112867|CRISPRCasFinder
CCTTCTCCCCGCCTGCGGGGAGAAAGGGATATGCCGCACCGCTCCAGTCCCCTCTCCCCGCCTGCGGGGAGA

>NC_018700|2|2|2112796-2112867|CRISPRCasFinder
CCTTCTCCCCGCCTGCGGGGAGA	AAGGGATATGCCGCACCGCTCCAGTC
CCCTCTCCCCGCCTGCGGGGAGA

Protein	Signature genes	Signature genes Name	Protein_function
NC_018700.1\|WP_010969795.1\|2103650_2104769_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226359
NC_018700.1\|WP_003536404.1\|2114600_2115362_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NC_018700.1\|WP_013844655.1\|2122778_2123561_+\|crotonobetainyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|179599
NC_018700.1\|WP_003536394.1\|2105642_2106566_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NC_018700.1\|WP_010969796.1\|2104773_2105631_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NC_018700.1\|WP_010969799.1\|2111594_2112758_+\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270308
NC_018700.1\|WP_003536396.1\|2106749_2108195_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270303
NC_018700.1\|WP_010969803.1\|2116534_2117437_+\|3-keto-5-aminohexanoate-cleavage-protein	unknown	unknown	gnl\|CDD\|225785
NC_018700.1\|WP_003536654.1\|2123901_2125491_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173868
NC_018700.1\|WP_013844651.1\|2110421_2111543_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NC_018700.1\|WP_010969797.1\|2109475_2110279_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715
NC_018700.1\|WP_010969801.1\|2113777_2114596_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
NC_018700.1\|WP_010969793.1\|2100952_2102530_-\|carbohydrate-kinase	unknown	unknown	gnl\|CDD\|212666
NC_018700.1\|WP_003536397.1\|2108309_2109269_-\|sugar-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225263
NC_018700.1\|WP_003537893.1\|2117612_2119103_+\|carnitine-3-dehydrogenase	unknown	unknown	gnl\|CDD\|236044
NC_018700.1\|WP_014526942.1\|2115453_2116425_-\|GlxA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227311
NC_018700.1\|WP_010969804.1\|2119354_2120515_+\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173847
NC_018700.1\|WP_010969794.1\|2102529_2103654_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226359
NC_018700.1\|WP_010969800.1\|2112911_2113778_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224097
NC_018700.1\|WP_010969805.1\|2120709_2122773_+\|acetate--CoA-ligase-family-protein	unknown	unknown	gnl\|CDD\|223972

Protein	Function_ID	Function_description	E-value
NC_018700.1\|WP_010969795.1\|2103650_2104769_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226359	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism].	2.64756e-127
NC_018700.1\|WP_003536404.1\|2114600_2115362_+\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.79977e-74
NC_018700.1\|WP_013844655.1\|2122778_2123561_+\|crotonobetainyl-CoA-hydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	0
NC_018700.1\|WP_003536394.1\|2105642_2106566_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	4.87822e-76
NC_018700.1\|WP_010969796.1\|2104773_2105631_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.60191e-70
NC_018700.1\|WP_010969799.1\|2111594_2112758_+\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270308	cd13590, PBP2_PotD_PotF_like, The periplasmic-binding component of ABC transporters involved in uptake of polyamines; possess the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain that functions as the primary high-affinity receptors of ABC-type polyamine transport systems. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	7.47576e-101
NC_018700.1\|WP_003536396.1\|2106749_2108195_-\|extracellular-solute-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.05749e-41
NC_018700.1\|WP_010969803.1\|2116534_2117437_+\|3-keto-5-aminohexanoate-cleavage-protein	gnl\|CDD\|225785	COG3246, COG3246, Uncharacterized conserved protein [Function unknown].	2.60403e-141
NC_018700.1\|WP_003536654.1\|2123901_2125491_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173868	cd08503, PBP2_NikA_DppA_OppA_like_17, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NC_018700.1\|WP_013844651.1\|2110421_2111543_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	1.28505e-170
NC_018700.1\|WP_010969797.1\|2109475_2110279_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	8.23244e-17
NC_018700.1\|WP_010969801.1\|2113777_2114596_+\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	5.22895e-69
NC_018700.1\|WP_010969793.1\|2100952_2102530_-\|carbohydrate-kinase	gnl\|CDD\|212666	cd07802, FGGY_L-XK, L-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases. This subfamily is composed of bacterial L-xylulose kinases (L-XK, also known as L-xylulokinase; EC 2.7.1.53), which catalyze the ATP-dependent phosphorylation of L-xylulose to produce L-xylulose 5-phosphate and ADP. The presence of Mg2+ might be required for catalytic activity. Some uncharacterized sequences are also included in this subfamily. L-XKs belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	0
NC_018700.1\|WP_003536397.1\|2108309_2109269_-\|sugar-binding-transcriptional-regulator	gnl\|CDD\|225263	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription].	2.77714e-122
NC_018700.1\|WP_003537893.1\|2117612_2119103_+\|carnitine-3-dehydrogenase	gnl\|CDD\|236044	PRK07531, PRK07531, carnitine 3-dehydrogenase.	0
NC_018700.1\|WP_014526942.1\|2115453_2116425_-\|GlxA-family-transcriptional-regulator	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	1.3357e-116
NC_018700.1\|WP_010969804.1\|2119354_2120515_+\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	6.73322e-130
NC_018700.1\|WP_010969794.1\|2102529_2103654_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226359	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism].	1.05798e-125
NC_018700.1\|WP_010969800.1\|2112911_2113778_+\|ABC-transporter-permease	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	1.8636e-77
NC_018700.1\|WP_010969805.1\|2120709_2122773_+\|acetate--CoA-ligase-family-protein	gnl\|CDD\|223972	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion].	6.59062e-149

>NC_018700.1|WP_010969799.1|2111594_2112758_+|spermidine/putrescine-ABC-transporter-substrate-binding-protein
MTKWYRENAPITADKLADELMRLKRGSVSRRHFLGVTGLGLATAVLARQPGLFNSAAYAAGDLGTQMSIATWPNYHDPATFEAFTAATGVAVEVNVFGSNEEMLAKLQAGGIGWDLFVPTNYTISTYVKLGLIDELDLSKLPNYDASTENARFTNEGIVEGKTYAVPKNWGTTGIAVNSDKIKAPVASWKDFFEIAMTEADGRAMVHDYQLTTIGNALVSLGFSFNSIKPEELAKAEELLIKVKPHLYAINSDYQPSMRATDAWMTMCWTNDGAQLNRDMPEIKFVLGKDGGEIWSDFYAIPKSAANKPAGYALLDYLMTPANAVKEHIANGAPTTDSRVMKLLPADVTSNKIVYPDEAALTPLEFGAAVTLTDPGRAELMARFKSA
>NC_018700.1|WP_013844651.1|2110421_2111543_+|ABC-transporter-ATP-binding-protein
MNREQFQERPQGTDVTSASTNDIEFRSVAKRYGSVTAVSDINLTVPKGAFVALLGPSGCGKTTCLRMIGGFEQPSEGMVYIGGQPMNGVPAYRRPVNMVFQQYALFPHLDVEQNVAYGLKQTRPRIPAAEITRRAQEALEMVRLGGFGKRRIHEMSGGQQQRVALARAIVNKPKVLLLDEPLAALDKKLRTAMQIELQSLQRELGITFVLVTHDQEEALSMSDFVCVMSTGRIVQIGPPQEIYDRPASLFVADFVGKTNRIAGTIEPGAGAVLLANGVGLAKPARANGTAGPVMVALRPEAISLVRDGSAALRGTVTHRIFLGSSVEYSVEVEGLGDFLVTADRRSLNDSDLAEPGERIGLSFDPNAMHVFPA
>NC_018700.1|WP_010969797.1|2109475_2110279_-|helix-turn-helix-transcriptional-regulator
MGIDLDRLFQAMARLVNGAPMDDEAVGCTFRGLMSTLMTFDYVVVFAYRGKERPLDLYSTFDAEDHVLFVSLYQAGPYLLDPFYHAARAPKPGVWRMRELAPDRFFSSEYYRTYYVQTGLAEEVGFFVPVSEQVTVVLSLMRREATGVFSATEFALLKKAEPLVAAFVRHHWAELDRRFDTALAKKGRGRRKAAHPPADGVWRHLNLTEREAAIIELVLQGHSSESIGLKLGISTGTVKVHRRNVYRKLGISSQTQLLSLYIKNLGQ
>NC_018700.1|WP_003536397.1|2108309_2109269_-|sugar-binding-transcriptional-regulator
MAIIGGMAVRDDEASMATRAAWLHYAGGLTQAEVAKRLGLTSLKAHRLIMKANQEGLVKVYIDGDVSECVELEQKLSSRYGLDYCEVVPDFDSDDLPLKALGISGAQFLRREIERGETALIGVGHGRTLAASIEYMPRTASNNTRFVSLLGGLTRKFSANPHDVIHRLAERTGAEAYVMPVPFFANTVEDRDVLFSQRGVREVFDLAKSADLLMVGIGTAEREASLVATGMIEMREIAEIQKAGGVGELLGHFFDEKGRPIETALSNRTFTLGRQDLKNRRTVAIAGGRVKTRPIRAVLESGFLSGLITDERTAQTLAA
>NC_018700.1|WP_003536396.1|2106749_2108195_-|extracellular-solute-binding-protein
MYDKEKDLIGAFLRGEVDRRGLLKGLGAAGLTAGTAGTLFNMMSTQALAADFDWKAHSGKSLKLLLNKHPYADAMIANLQAFKDLTGIEVTYDVFPEDVYFDKVTAALSSGSSEYDAFMTGAYMTWTYGPAGWITDLNEWIKDPAKTNPQYGWDDFLPGVKASCAWNGQPGGALGSEDAKQWCIPWGYEQNNLSYNQEMFEKVGASVPKNLDELVATAAKLNKDVGGGVYGIGVRGSRSWATIHPGFLSGYANFGQKDLNVSEDGKLSAAMNTAESKAFHAKWVQMIQESGPKDWSTYTWYQVGTDLGAGASAMIYDADILGYFMNGGDNKMAGKLAYAPFAANPEAKAPTPNIWIWSLAMSNFAKDKDATWYFLQWASGLEHAIFGATKMDFVNPVRASVWKDEIFRERLNKSYPGYVEMHDVSAPGAKIHFTPQPLFFDLTTEWAATLQKMVAKEVPVDEGLDRLVESINRQLAEAGLG
>NC_018700.1|WP_003536394.1|2105642_2106566_-|sugar-ABC-transporter-permease
MASVTHSSPRGSRFRISKRALPYVLSLPALLVCIGILIPFFTAVIYSFQRYRLSQPWARQFNWGENYLNFFTDPGFWNTLKISLLYAGVTVTLELLLGLGIALLLQRRSTVNNFISIMLLLPLMTAPALAALMWKLMTNPGFGILSYLASLVGLENFRWASSPDTALLTVVLVDIWVYTPFIMILLLAGLRSLPTQPFEAAALDGVPRSFVFFRITLPMLTPYILTATLFRLLDSIQQFDIIYAMTQGGPGDTLTVFQVEAYLNFFQSTNVGRSAALLIILWAITYALSNIFIKNWLRLRERARGEA
>NC_018700.1|WP_010969796.1|2104773_2105631_-|carbohydrate-ABC-transporter-permease
METTSPVERLLRGVALTLVVVFFMFPIVWIFLMSFQTNETILRIPPSVVFTPTLENYAALITGKLQTASGTLDIAFMRNLGNSVLLSVASVALALVLGVPAAYAFARHKFRGSEDIAFTLLSFRFAPPLLVLLPLTQYFQWLGLSNTYFGLIWIYQLICLPLILWIVRGYFEDISADVEYAYRIAGHSWFSTFRKIALPLAGPGIAAAGLLAFIFAWNNFVFALVLASADKQPVTVGALAFVTASGIQYGQIAAAIVLSITPTLALALYAQRYLVEGLSLGAVKG
>NC_018700.1|WP_010969795.1|2103650_2104769_-|ABC-transporter-ATP-binding-protein
MTTLQLKNIVKRYKSQTVLDDLSLDVANGERLVLFGPSGSGKTVLLRLIAGVIEPDGGRVLIGGEDMTDVDAEHRGLGMAFQNFALFPHMSAFDNIASALTSRKSSRDTIAAGVHKVAKLLKIDHVLSHHPKALSNGQKQRTALARALVGSPPLLLLDDPLRNVDAKLRFEMRLELPRLLAAQGATVIYVTQDYKEAMALGDRIAVMAHGRIRQIGTPAEIYNAPADIEIARLFGDPTINLLDVVPQRGPDGAFVELSDMRLRLPGFGAEIIEKQCVLGLRPETIAFAEASAHGAIPVTVEAETPLNEKTVTLALTARGREILVSRPAGTPGPVAGPAHIAVDGRAAFLFDKATGQRILPSELASKRDGEAA
>NC_018700.1|WP_010969794.1|2102529_2103654_-|ABC-transporter-ATP-binding-protein
MNATALLIDNVDKFYGPVDYGVHAVKQLKMEVKKGEIIALLGSSGCGKTSTLRMIAGFEPVSRGTISVAGRQVHMLAPVRRNVAMAFEGYSLYPPLTVRENIAFALKASKLSQSVVEEKVASIAKLLEIEDILGRYPSSISGGQQQRASLGRALIRDADLHLLDEPMGQLEPQLRAVLRGRIKHYIKERGLTAILVTHDQTEANALADRIAVMEGGVLQQFDTPQKIKERPANLFTGTFVGEPPMNVFEASISGTDARVTFGLKDGVRLEYQAADFSHAVRDALMKRQNVVLGIRPYSVRRSADGVTGRVAVNQWLGDQTHIAADFAGGTMVLVEHDRTSLEIGQPIGIRLDPASLHVFDSESGMAISHGEELA
>NC_018700.1|WP_010969793.1|2100952_2102530_-|carbohydrate-kinase
MRDILIGIDAGTSVIKSVAFDLGGRQLAMTAVPNSYEAVGRTGSVQELRRTWTDTVKTLVELSARIENLPGRVAAIAVTGQGDGTWMIDREGEPVGKGWLWLDARAGAIVERLRAESGDAERFSRTGSGLAACQQGPQLRWMKDHAPEMLQGAATAFHCKDWLYFNLTDKRATDPSEANFTFGDFRKRQYSDEVIDFLGLNELKHLLPEIVDGASTHHPLSAAAAAATGLPAGTPVVLGYVDVVCTALGAGLYDPGTDTGCSIIGSTGMHMRLAAGADDVRLNQDHTGYTMCMPIPGTYAQMQSNMAATLNIDWILQFAGGLLKGMGIEKSKNDLLAHVDGWLSEANETPLLFQPYISEAGERGPFVDASARASFVGLSINHGFGDMVRAVFDGLAFASRDCYAAMGPLPACVRLSGGAARSASLRRILGGALGASIQTSEREEAGAAGAAMIAAVSLGIYPSMADCVREWVRPHHRPAEPADEELARRYDALFPAYKQSRLALQPVWHALSHAAGTGNQQERPQ
>NC_018700.1|WP_010969800.1|2112911_2113778_+|ABC-transporter-permease
MRVATNTKRNLVTAALIAPAAVWLTVFLVLPFIAMLVFAFGERAPEGGYQPAFTFAQFANLPTRAAAFWNTLMLAPAGALLCLVVAYPVAYYLAVKANPRYRLILVSLVVVPFWTSLLVRTYAWMYILGSRGIPNLLSMIGIEDVRMLNTPGAVLLGIVYGYLPLMIMPIYVSLEKLDRRLLEASADLGGKPVSTFLGVTLPLSLPGVMTGVALVTILLLGEYLIPQLLGGGKVFFIGNALVDLFLQSRNWPFGSAIAVTLVAVVVVVLMVAMRIAWKVAGTRQVDLV
>NC_018700.1|WP_010969801.1|2113777_2114596_+|ABC-transporter-permease
MRAFISSVYLFLYAPIALVVLFSFNAGRNASEFTGFSLAWYGKALGNTFLVSALQNSLIIAFTSATLAAVFGTMAALGMERLGSRMRALFDALFAAAIVVPGVVIGIATLVALVAVFSFVNPTIAALWPGEQPPQLGLGYGSIIAAHGLFSMALVTMIVKARIASLGRDIVEASGDLYATPLTTFRLIVLPQILPSILAGFLLAFTFSFDDFIIAFFVAGSKTTLPIYVFASIRRGVTPEINAIATLVLVASLLLILTARVLMREKKSKSGE
>NC_018700.1|WP_003536404.1|2114600_2115362_+|SDR-family-oxidoreductase
MILNNRIAIVTGAGSGIGRAGAAIMAREGAHVVVVDRSVEAAGDTVAAIAAGGGSAEALAVDVTDDDALADGIADILYRHGRIDILHNHAGAQVAGDLEEVEVAGFDRSWNLNVRAHFMAARLVMPSMKKAGRGVIVNTSSSSGVLYDREMIAYTTTKHAVIAMTRQMAGDYAKYGVRVNALCPGWVDTPFNEPFIDQMGGREAIEAYIRERVPLGRWASVDEIAESILFLVSDRSSYMTGQILVVDGGETVV
>NC_018700.1|WP_014526942.1|2115453_2116425_-|GlxA-family-transcriptional-regulator
MDSSIAQAQHIDLLILPETNLILVASVIEPLRAANRIAGRTLYSWSLFSPDGRAIETKSGIPVPVAGAFRPQRETAPLFVLSSYHWQRSATSQLKMLLSQTARHREMMAGIESGSWLLAETSLLDNFSATTHWEDFEDFAAAYPQVTMVRERFVIDRKRITTGGSLPTLDLMLELIRRAHGYSLALEVSRLFIYEQERTRGDLLQVPAIGNMRILDTRVGAAVKLMEETVEAPLTLARLARRVGVSARHLQDLFKETMGVAPHEHYLALRLNAARRKVIETRMEFADIAAISGFNSSSSFSRSYRAHYRESPSETRRRLKLKN
>NC_018700.1|WP_010969803.1|2116534_2117437_+|3-keto-5-aminohexanoate-cleavage-protein
MPLSMNREVFITCAVTGAGDTVSKSSHVPVTPKQIAESAIEAAKAGAAVVHCHVRDPETGAPARRLDLYREVTDRIRSADIDVVLNLTAGMGGDLVFGNVESPFPVDEKGTDMAGATERVAHVAECLPEICTLDCGTMNFSLGDYVMTNTPSMLREMARQMTALGVRPEIEAFDTGHLWFAKQLAEEGLIEDPVLIQLCMGIPWGAPDDLNTFMAMVNNVPSNWTFSAFSIGRNAMAYPAAAVLAGGNVRVGLEDNLYVGKGQLATNAQLVEKAVSVVESMGAKIIGPEEVRRKLKLTKR
>NC_018700.1|WP_003537893.1|2117612_2119103_+|carnitine-3-dehydrogenase
MTTITKAACIGGGVIGGAWAARFALAGIDVNIFDPHPEAERIIGEVMANAERAYGMLTMAPLPPRGKFTFCRSIQEAVEGVDWIQESVPERLPLKRGVINEIDAAARPDALIGSSTSGLLPSDLQAEMKHPERMFVAHPYNPVYLLPLVELVGGRKTSPETIRRAEEAVAEIGMKGVVIAKEIEAFVGDRLLEALWREALWLIQDDICDTETLDDVMRYSFGMRWAQMGLFETYRIAGGEAGMRHFLAQFGPCLKWPWTKFTDVVDLDDALVEKIGAQSDAQAAGRSIRELERIRDENLVGIMHALKAGDGGKGWGAGKLLADFEKRLWEKGGSPSKSLDASGPLRLVDTKVNAAWVDYNGHMTEHRYLQLFGDTSDALLKVIGVDFAYVEAGHSYYTVETHIRHLGEAKLGQALYTTLQLLSSDEKRIHFFTRIHDAASGDVIATAEQMMLHVDAKAGKSVPAPAEVMAKLKPIAEGHAKLDAPDGAGRHVGQKR
>NC_018700.1|WP_010969804.1|2119354_2120515_+|acyl-CoA-dehydrogenase-family-protein
MNFALTEEQQMIVDTVRTFVETEIYPHENEVERTGVVPRELGLEIARKCKELGFFACNFPEEVGGAGLDHLTFTLVERELGRGSMGLTVFFGRPSGILMACNEDQRERYLLPAVRGDKFDALAMTEPDAGSDVRGMKCFARPDGDDWIVNGTKHFISHADIADFVIVFIATGEEQTPRGPKKKITCFLVDRGTPGFEIREGYNSVSHRGYKNCILTFDDCRLPSAQILGEVHKGFDIANDWLYATRLTVAATSVGRARRAFDYALSYAAERKQFGKPISANQGVSFKLADMITEIDAADLLTLSAAWRLDQGLPSNREIASAKVFATEMLARVTDEAIQIYGGMGLMDDLPLARFWRDARVERIWDGTSEIQRHIISRDLLRPLGA
>NC_018700.1|WP_010969805.1|2120709_2122773_+|acetate--CoA-ligase-family-protein
MTTPPRSLDRLIRPRSIAVFGGKEARRVIEQCDKMGFAGDIWPVHPREEEILGRRCYRSVADLPEAPDASFVGVNRALTIEIIRDLATRGAGGAVCYASGFREAANELADGNDLQEALVAAAGDMPIVGPNCYGFINMLDGALLWPDQHGMLRVERGVAILTQSSNIACNISMQKRGLPLAYVMTAGNQAQTGLSDIACAVLEDPRVTAVGLHIEGFDSIEALERLAARARELRKPVVTLKVGKSEAAQLATVSHTASLAGNDRVSSALLARLGIGRVDTLPELLETLKLLHLHGPLPSADISSMSCSGGEASLVADAGVRRKVNFRALREEQRQPLRESLGEMVTIANPLDYHTFVWGNREKQTAAFTAMMHGGYALNLIVLDFPRLDRCDAADWVTTCEAVIDSTKATGAVAGIVASLGENMPEETAISLVSAGVVPFFGIDEALGAVETAAAIGAVWAKPAAPPLLRSRPEGGEIVTLSEAEAKDELAAAGVIVPGGRSAATVEEAAAAAESLGFPVALKGLGVAHKTEAGAVRLNLTNRDEVIEAARGMASVASGYLVEKMIAKPVAELIVGAARDAVAGPVLTIGAGGILVELLEDSAILTLPVTEESIRDAIAGLKISRLLDGYRGNPKGDIAALIRTVAAAASYVVANASKLEELDINPIMVLPDGHGAVAADALIRRRK
>NC_018700.1|WP_013844655.1|2122778_2123561_+|crotonobetainyl-CoA-hydratase
MTGPILTRREGGILEVTIDRPKANAIDLKTSRVMGEIFRDFRDDPELRVAIITGAGEKFFCPGWDLKAAAEGDPVDGDYGVGGFGGMQELRDLNKPIIAAVNGICCGGGLEIALSTDIILAAEHASFALPEIRSGTLADAASIKLPKRIPYHIAMDMLLTGRWLDVVEANRWGFVNEILPAGRLMDRAWELARLLESGPPLVYAAIKEVVRDAEGRDFQTTMNKVTRRQFRTVDVLYSSEDQLEGARAFAEKRDPVWKGR
>NC_018700.1|WP_003536654.1|2123901_2125491_+|ABC-transporter-substrate-binding-protein
MSDYKDYLARQVMLGKMNRREFLGRAAALGIAASTANTLFASSAAAQEPKRGGHLKLGLEGAAATDSRDPAKALSQFMFVVGRNWGDMLVESHPTTGEPVPALAESWEPSADAATWTFTIRKGVKFHDGKELTIDDVIKTLQRHTDEKSESGALGVMKSIKEIKADGDKLVLTLTEGNADLPLLLTDYHLIIQPNGGTDNPDAMIGTGPYKVASFEPGVRATFERNADDWRTDRGYVDSVELIAMNDATARIAALSSGQVHFINRVDPKTVNLLKKAPTVEILNTSGRGHYVFIMHCNTAPFDNNDLRMALKYAMDRETLVQRILGGYGKVGNDFPINDTYALFPEGIEQRAYDPDKAAFHYKKSGHSGPVLLRTSDVAFPGAVDAAVLYQASAKKAGIEIEVKREPGDGYWSNVWNVQPFSTSYWGGRPTQDQMYSTAYLSTADWNDTRFKRPDFDKILLEARSELDEAKRKDMYRTMAMMVRDEGGLILPMFNDFVNAAGKTVKGYVHDIGNDMSNGYVATRVWLDA

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Crispr_ID: NC_018700_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018700_3

3456350-3456496

Orphan

Consensus_repeat	Method
TCTCCCCGCATGCGGGGAGAAGGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NC_018700_3

>merge|NC_018700|3|3456350-3456496|CRISPRCasFinder
TCTCCCCGCATGCGGGGAGAAGGGAATCGCGGGTTCGCCTTCGCACCATCTCCACACGCAGGCGCGCCGTGGCGTACGTCCCCTCTCCCCGCATGCGGGGAGAGGGTTAGGGTGAGGGGCGGTCGTCCCCGCGCGCGGGGAGAAGGT

>NC_018700|3|3|3456350-3456496|CRISPRCasFinder
TCTCCCCGCATGCGGGGAGAAGGG	AATCGCGGGTTCGCCTTCGCACCATCTCCACACGCAGGCGCGCCGTGGCGTACGTCCCC
TCTCCCCGCATGCGGGGAGAGGGT	TAGGGTGAGGGGCGGT
CGTCCCCGCGCGCGGGGAGAAGGT

Protein	Signature genes	Signature genes Name	Protein_function
NC_018700.1\|WP_010968394.1\|3466438_3468244_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NC_018700.1\|WP_010968395.1\|3468261_3469080_+\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NC_018700.1\|WP_003531958.1\|3460266_3461349_-\|microcin-C-ABC-transporter-permease-YejB	unknown	unknown	gnl\|CDD\|226642
NC_018700.1\|WP_013844977.1\|3447484_3448954_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	unknown	unknown	gnl\|CDD\|227297
NC_018700.1\|WP_010968389.1\|3455435_3456290_+\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|223862
NC_018700.1\|WP_003537933.1\|3451242_3452406_+\|IS4-like-element-ISRm16-family-transposase	unknown	unknown	gnl\|CDD\|376573
NC_018700.1\|WP_010968386.1\|3450030_3451014_+\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|224975
NC_018700.1\|WP_010968392.1\|3463680_3464748_+\|penicillin-insensitive-murein-endopeptidase	unknown	unknown	gnl\|CDD\|226293
NC_018700.1\|WP_010968387.1\|3452663_3453473_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|227343
NC_018700.1\|WP_013844980.1\|3465310_3466330_+\|glucokinase	unknown	unknown	gnl\|CDD\|234716
NC_018700.1\|WP_003537743.1\|3455082_3455427_+\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NC_018700.1\|WP_003531957.1\|3461529_3463389_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173862
NC_018700.1\|WP_010968385.1\|3449012_3450023_+\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|227300
NC_018700.1\|WP_010968391.1\|3457496_3459125_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226641
NC_018700.1\|WP_010968390.1\|3456526_3457486_-\|glyoxylate/hydroxypyruvate-reductase-A	unknown	unknown	gnl\|CDD\|240641
NC_018700.1\|WP_010968382.1\|3445433_3446114_+\|pilus-assembly-protein-CpaD	unknown	unknown	gnl\|CDD\|227748
NC_018700.1\|WP_003531959.1\|3459133_3460267_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226690
NC_018700.1\|WP_003531955.1\|3464868_3465249_+\|methylglyoxal-synthase	unknown	unknown	gnl\|CDD\|224716
NC_018700.1\|WP_010968383.1\|3446136_3447423_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|227298
NC_018700.1\|WP_013844979.1\|3453603_3454995_+\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|223338

Protein	Function_ID	Function_description	E-value
NC_018700.1\|WP_010968394.1\|3466438_3468244_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NC_018700.1\|WP_010968395.1\|3468261_3469080_+\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	1.01351e-123
NC_018700.1\|WP_003531958.1\|3460266_3461349_-\|microcin-C-ABC-transporter-permease-YejB	gnl\|CDD\|226642	COG4174, COG4174, ABC-type uncharacterized transport system, permease component [General function prediction only].	0
NC_018700.1\|WP_013844977.1\|3447484_3448954_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	gnl\|CDD\|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	0
NC_018700.1\|WP_010968389.1\|3455435_3456290_+\|C40-family-peptidase	gnl\|CDD\|223862	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane].	1.21182e-26
NC_018700.1\|WP_003537933.1\|3451242_3452406_+\|IS4-like-element-ISRm16-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.69173e-26
NC_018700.1\|WP_010968386.1\|3450030_3451014_+\|type-II-secretion-system-F-family-protein	gnl\|CDD\|224975	COG2064, TadC, Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion].	7.10359e-56
NC_018700.1\|WP_010968392.1\|3463680_3464748_+\|penicillin-insensitive-murein-endopeptidase	gnl\|CDD\|226293	COG3770, MepA, Murein endopeptidase [Cell envelope biogenesis, outer membrane].	5.68793e-158
NC_018700.1\|WP_010968387.1\|3452663_3453473_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|227343	COG5010, TadD, Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion].	1.63751e-80
NC_018700.1\|WP_013844980.1\|3465310_3466330_+\|glucokinase	gnl\|CDD\|234716	PRK00292, glk, glucokinase; Provisional.	1.33162e-165
NC_018700.1\|WP_003537743.1\|3455082_3455427_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.39809e-11
NC_018700.1\|WP_003531957.1\|3461529_3463389_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173862	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NC_018700.1\|WP_010968385.1\|3449012_3450023_+\|type-II-secretion-system-F-family-protein	gnl\|CDD\|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	3.38407e-115
NC_018700.1\|WP_010968391.1\|3457496_3459125_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226641	COG4172, COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only].	0
NC_018700.1\|WP_010968390.1\|3456526_3457486_-\|glyoxylate/hydroxypyruvate-reductase-A	gnl\|CDD\|240641	cd12164, GDH_like_2, Putative glycerate dehydrogenase and related proteins of the D-specific 2-hydroxy dehydrogenase family. This group contains a variety of proteins variously identified as glycerate dehydrogenase (GDH, also known as hydroxypyruvate reductase) and other enzymes of the 2-hydroxyacid dehydrogenase family. GDH catalyzes the reversible reaction of (R)-glycerate + NAD+ to hydroxypyruvate + NADH + H+. 2-hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann-fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	1.07536e-138
NC_018700.1\|WP_010968382.1\|3445433_3446114_+\|pilus-assembly-protein-CpaD	gnl\|CDD\|227748	COG5461, COG5461, Type IV pili component [Cell motility and secretion].	1.36517e-112
NC_018700.1\|WP_003531959.1\|3459133_3460267_-\|ABC-transporter-permease	gnl\|CDD\|226690	COG4239, COG4239, ABC-type uncharacterized transport system, permease component [General function prediction only].	0
NC_018700.1\|WP_003531955.1\|3464868_3465249_+\|methylglyoxal-synthase	gnl\|CDD\|224716	COG1803, MgsA, Methylglyoxal synthase [Carbohydrate transport and metabolism].	2.60323e-72
NC_018700.1\|WP_010968383.1\|3446136_3447423_+\|transcriptional-regulator	gnl\|CDD\|227298	COG4963, CpaE, Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion].	6.1818e-120
NC_018700.1\|WP_013844979.1\|3453603_3454995_+\|leucyl-aminopeptidase	gnl\|CDD\|223338	COG0260, PepB, Leucyl aminopeptidase [Amino acid transport and metabolism].	0

>NC_018700.1|WP_010968389.1|3455435_3456290_+|C40-family-peptidase
MPEVLDRRLNAYREDIAEARLRGLVEAKRFVEGTPAAVSVPVTPLRARPEAGCGTDTELLYGETVRVLDVADGWAWVRSDLDGYVGYVPENVVQPPQAPATHLVAVPRTFVYRGADLRFPQAFALSMGSRIAVVGEAETRGTRYFLLDGGLAIVADHCIPAAGALTEDYVAIAARFLETPYLWGGRSGFGIDCSGLVQLAMQMAGRNAPRDSDMQASGLGRAIEREELTRGDLVFWKGHVAIMEDEKTLLHANGHTMTVAREGLEDAIRRIGWLYAQPTGYRRP
>NC_018700.1|WP_003537743.1|3455082_3455427_+|winged-helix-turn-helix-transcriptional-regulator
MPVELTPSQALGLWHAVSLEQVRVDSRDLTLRQMAILLQIYLVPPPHTVRGLAASLGVTKPVITRALDTMGALGLVDRIRDERDRRNVIIKRTVEGALYLEKFGDLIINQGRKM
>NC_018700.1|WP_013844979.1|3453603_3454995_+|leucyl-aminopeptidase
MAPFQFIERQSPFNTSNGKTLPIFAVTPAHIETGSIDPIALDWAKKAGFKAESGAVLLIPSADGHLGGALFGLGANPSDAPFLTGKLARALPAGKWHIETAPLTANRLALGYGLGSYRFERYKSAKTDAPTLLIPADSDATDIKRQLAGVFLARDLINTPTNDMGPEALEAAFRALAAHYKADVSVISGEALLTENFPLVHTVGRASAEAPRLLEMRWGRKGHRKVTLVGKGVCFDTGGLDIKPAASMLLMKKDMGGAANVMGLALMIMDAKLKVDLRVIVPVVENSISANAFRPGDIYKSRKGLTVQIDNTDAEGRLILADALAYADEEKTDLVVDMATLTGAARVALGPDLPPFFTDDDDLARDLAEASLTVDDPVWRMPLYRGYDKDVSARIADLTNAPSGGMAGSITAALFLKRFVTNAKSWVHFDIFGWAQSERPHSPIGGEAQAIRALYHHIGRIAG
>NC_018700.1|WP_010968387.1|3452663_3453473_-|tetratricopeptide-repeat-protein
MTMQDNFSFSLRRLATGVAVAMVALSLSACAGQQGRKELTTGSIPKLTRPVQSMNATELAAAAERIGQAYERNPKDREAGLNYANLLRMTGRNEQALAVMQQVAIYHPADREVLGAYGKAQAAAGQLEQALATISRAQTPDRPDWKLKSAEGAILDQLGRSAEARLRYREALDLKPNEPSVLSNLGMSYLLTKDLRTAETYLKSAASQPDAGSSVRQNLALAVGLQGRFQEAETIAGQELTSEQAEANVAYLRSVLSQQGAWKQLAKAD
>NC_018700.1|WP_003537933.1|3451242_3452406_+|IS4-like-element-ISRm16-family-transposase
MRFTPSIFAQLLKAIDRRSFQAIVDRHAGDAYDKCFTSWDHLVALIYAQLSATTSLRGLEASFNANSQHHYHLGSGRLMRSTLSDANRRRPVAVFAETFALLAGQLDRQTRREGTKMLRLIDSTPIPLGKLYDWAKSNGRIRGMKLHVVYDPKADCPGILDITDANVNDAQIGRTITIEKGATYVFDKGYCHYGWWTAIAEAGASFVTRPKTNMGLALVAERPVEQPQGDGFLVLEDSQVSLASKGDSKLPIGLRRVIVKRQDGDTITLLTNDLERSAVEIGQLYKDRWQIELLFRWIKQHLKIRKFLGNNDNAIRLQIFAAMIAYALLRIAARLARVPLPILRFTDLVTQCLFQRKSIAEIHKPPQVNPSRPKPRTIPNQMVFRYA
>NC_018700.1|WP_010968386.1|3450030_3451014_+|type-II-secretion-system-F-family-protein
MAGWIETLTDPNILVAALVSMAVLATFYSLVAPLLERGDLAKRMKSVATEREQIRARERARLNAEATTGRASLRAQHNTSVREIVERLNLRKALVDDNTVNRLKTAGYRSQNALNTFLFARFCLPFLFLTVAVLYIFVLGNFADKPIMVRVSFAIGFAYVGFYAPNIFIANAISKRQQSIRRAWPDALDLLLICVESGVSMELAMRRVADEIAVQSPPLAEELVLTTAELSFLPERRIALENLGLRTGLDEVKSVTQALIQADRYGTPVAQALRVLAQESRDQRMTAAEKKAAALPPKLTVPMILFFLPVLVAVILGPAGIQVADKF
>NC_018700.1|WP_010968385.1|3449012_3450023_+|type-II-secretion-system-F-family-protein
MFGIDITVLGLAGLVALAAAALAYGVLYPQIETEKKAEGRLRRVSASETDRTKIKAARDRVNEMSKRRKSVQDSLKELEKKQQEKSANTAPSMKKRLLQAGLSISLAQFYLFSALFGLFAFLVVLLAGAGLLIAAGVALIGAAGLPRWIVGSMVKRRCRKFLDEFPNSLDVMVRSIKSGLPLNDALRLIASDGQEPVRTEFRRVVESQQVGLNVPEACARMIHSIPLPEVNFFAIVIAIQAQAGGNLSEALGNLSKVLRERRKMKAKVSALSMEAKASACIIGALPFIVATLVYLTSPDYMMVLFTDPRGHIIMGASAVWMSIGIWVMRNMINFDI
>NC_018700.1|WP_013844977.1|3447484_3448954_+|Flp-pilus-assembly-complex-ATPase-component-TadA
MFGKRGNEGPGKGGARGFSPAPPMPAVQPVPVERSAAPVLGETVAAPSRPQAAAPPQRRRAPRAEDYYDTKSQVFSALIDTIDLSQLSKLDIESAREEIRDIVNDIITIKNFAMSISEQEELLDDICNDVLGYGPLEPLLARDDIADIMVNGAGQIFIEVGGKVEESEIRFRDNGQLLSICQRIVSQVGRRVDESSPICDARLPDGSRVNVIAPPLAIDGTALTIRKFKKDKLTLEQLVRFGSITPEAAVLLQIIGRVRCNIVISGGTGSGKTTLLNCLTRYIDSTERIITCEDSAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIIVGEVRGPEVFDLLQAMNTGHDGSMGTIHANTPRECLSRMESMIAMGGYTLPARTVREIISGSVDVIIQASRLRDGSRRITHITEVTGMEGDVIITQDLMRYEIDGEDANGRIVGRHVSTGIGRPHFWDRARYFNEDKRLAATLDAMEKQQ
>NC_018700.1|WP_010968383.1|3446136_3447423_+|transcriptional-regulator
MNAIEYTIDSGGTGDWPADGTRPGDLEQLRPLPRISIHAFCESEAVQRLMERCGQDRRMAKVSLRVTGGGIAAAANTFAGASTPNLIILETATEPGALLSELAPLAEVCDPSTRVIVIGRHNDIALYRELIRNGISEYMVAPVGMADMLSAVSAIFVDPEAEPLGRSLAFIGAKGGCGSSVIAHNCAWGISNLFSTETILADLDLPYGTANIDFDQDPPQGIAEAVFAPERLDEVFLDRLLTRCSEHLSLLAAPSMLDRAYDFETGAFQPILEILQRSAPVSVLDLPHGWTDWTRSVLSAADEVVITAAPDLASLRNAKNLLDALKKLRPNDKVPHLVLNQVGVPKRPEIAPDEFCASLEIEAAAIIPFDAVLFGNASNSGRMIAEIDRKSPAAETFAQLSHLLTGRTAIKKARRGGLGKVLAKLGRR
>NC_018700.1|WP_010968382.1|3445433_3446114_+|pilus-assembly-protein-CpaD
MALNRLPHRVVLYAIVAALLAGCASKDKLATGALPDDYRTRHPIVLTEGERTIDIPIASGDTRLTQGTRDVIRGFAAEYRNASSSVIQIMLPRGSVNGHAAQIVRKDIRRLLAASGVSPKKMIETTYDASVTGDAAPIRLSYVAITAQTAPCGAWPEDLALNTLENRNYYNFGCATQSNLAAQIANPTDLVGPRQMSPIDAEQRGQVIDSWRGTDKGDGGTTIVFN
>NC_018700.1|WP_010968390.1|3456526_3457486_-|glyoxylate/hydroxypyruvate-reductase-A
MPAKSPVIVDLKFIPEEVEAALAGAFPGREVIDLADPAHQERDLSGIDYAVVWKSAPDLFSRAPDLKVVFSGGAGVDHVLTLPGLPDVPLVRFVDRTLTTRMSEWVMMQCLLHLRQHRAYEALAKKHEWRDLSQPEAADVTVGIMGMGVLGQDAARKLAAMGFKVIGWSRSKRVIEGVETYDAAGLDAFLGRTDFLVGLLPLTPDTRGIFNAALFAKLSRNGPFGAPVFINAGRGGSQVEADILECLDSGVLGGASLDVFEREPLSPESRFWDMPNVYVTPHVAASSDVRALFVHVEHQIARFESGLPLEHVVDKVAGY
>NC_018700.1|WP_010968391.1|3457496_3459125_-|ABC-transporter-ATP-binding-protein
MTDTLLSVRDLSVAFHQGGETSLAVDRISFDIKRGETVALVGESGSGKSVSANSILKLLPYPAASHPSGEILFNGKDLLKASDDELRHVRGNDVTMIFQEPMTSLNPLHTIEQQIGEILEIHQDLKGAAARARTLELLEQVGIREAEKRLGAYPHQLSGGQRQRVMIAMALANRPELLIADEPTTALDVTVQAQILELLKSLKDEHGMSMLFITHDLGIVRKIADRVCVMTKGKIVETGPTAEIFANPQHAYTRHLLASEPRGEPPPSDASRPIVIEAKDMKVWFPIKAGFLRRVVDHVKAVDGIDLTLRAGQTLGVVGESGSGKTTLGLALTRLISSKGRIAFVGEDIDAYSFREMRPLRNRMQVVFQDPYGSLSPRMSIADIIGEGLKIHEKALTDGERDQRVAAALEEVGLDPATRWRYPHEFSGGQRQRIAIARAMVLKPQFVMLDEPTSALDMSVQAQVVDLLRDLQRKHNLAYLFISHDLRVVRALANEVIVMRLGKVVEQGPAERIFEAPTEDYTKALMAAAFNLEAVNLAAVHQ
>NC_018700.1|WP_003531959.1|3459133_3460267_-|ABC-transporter-permease
MSTATAYAGAPEKGWLTPIGRRRWQNFKANRRGYWSLWLFLLLFGLSLFAEFIANDKPILASYKGEILVPVLFDYPEEKFGGFLAETDYRSDFIRDEIGANGWMIWPPIRYSYQTVNSSIPHSAPTPPFWLMSEEERCSAYPQGADDPGCIAGNLNWLGTDDQARDVMARMIYGFRISVLFGLALTIASAVIGVSAGAVQGYFGGWTDLLMQRFIEIWSSMPVLYILLIIAAILPPGFFILLGIMLLFSWVGFVGVVRAEFLRARNFEYVNAARALGVGNGTIMYRHLLPNAMVATLTFLPFILSGSITTLTSLDFLGFGMPPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIMLSLLIFVGEATRDAFDPRKTFR
>NC_018700.1|WP_003531958.1|3460266_3461349_-|microcin-C-ABC-transporter-permease-YejB
MGAYILRRLLLMIPTIVGIMAISFAVVQFAPGGPVEQVISDLTNAAGSDRLSGNAGDLMPVGGGDGGQYRGAQGLDPDFIAKLEKQFGFDKPPLERFVTMMWDYMRFDFGESFFRNTPVIDLIIQKMPVSISLGVWILIFSYAISIPLGIKKAVSDGSTFDVWTSGVIIVGYAVPSFLFGILLIVLFAGGSFFDWFPLRGLVSDNFDQLSWYEKIIDYFWHMTLPLITLLLSAFATTTLLTKNSFIDEIKKQYVTTARAKGLTERRVLYGHVFRNAMLIIIAGFPGAFISAFFTGSLLIEYIFSLDGLGRLGYDAVVKRDYPIVFATLFIYSLMGLVVSLVSDLIYTWVDPRIDFERRDV
>NC_018700.1|WP_003531957.1|3461529_3463389_-|ABC-transporter-substrate-binding-protein
MPNFCRTVKPGLAASLLTAALLLLPPASNAEEQPVWHHATSSIGEPKYKDGFARFDYVNPDAPKGGELRLSESGTFDSFNPILAKGEVATGVSSLVFETLLKSAEDEITTSYGLLAEGISYPDDISSATFRLRAEAKWADGKPVTPEDVVFSFDMVKEHNPLFSNYYRHVISAEKTGERDVTFRFDEKNNHELPNILGQFPILPKHWWEGQDAKGSKRDISRTTLEPVMGSGPYKIASFQAGGSIRFELRDDYWGKDLNVNVGRYNFRTINYAFFSDRSVQFEAFRAGNVDFYQDNSASHWATAYDFPAMKDGRVIREEIENPLRATGIMQAFVPNMRREKFKDQRVRQALNYAFDFEDLNRSLAHNAFQRVDSYFWGTELASSGLPEGREKEILEELKDKVPAAVFTTPYKNPVNGDPQKVRDNLRKALALFKEAGYELKGSRLVNAKTGEPFSFEILLSNPTFERTVTPFVNSVRKIGIDARIRTVDDSQYTNRVRSYDYDMIYGIWAQTLVPGNEQSDYWGSASVNQPGSRNYAGIADPAIDELIRRIVFAPNREELVATTRALDRVLLAHHYVVPLFYSKALRVAYWNHLARPKELPYYGMDFPDAWWSKNTAAK
>NC_018700.1|WP_010968392.1|3463680_3464748_+|penicillin-insensitive-murein-endopeptidase
MKFDARAALRRCGSTVLALIMGVSLVSAEAAANDAPPAKELFGAKDLPMQAAPASFGFYSKGCLAGGVAIPTDGPTWQAMRLSRNRRWGHPAMIALIERFSHDAVEKIGWPGLLLGDISQPRGGPMLSGHASHQIGLDADIWLTPMPQRTLSYQERETISATSMLDKSKFLTVDPSIWTPSHARLIMMAASYPQVERVFVNPAIKKKLCDTWRGDRAALGKVRPIYGHDYHFHIRIKCPPGSKGCKDQAVVPAGDGCDKSLAWWFTDEPWAKPKQKPGAKPPKPKFAKLADLPKACALVLNGPAPASEQEATYGTAYRAPAAIPAAATSIEAVIEAAGEAPLANIPVPSPRPGLQ
>NC_018700.1|WP_003531955.1|3464868_3465249_+|methylglyoxal-synthase
MADRKCLALIAHDQKKDDLAAFAKANEAVLSKWKIVATGTTGGRVLDVCPALDIVRLKSGPLGGDQQIGALIATGDVDCLIFFVDPLTAMPHDVDVKALMRLAIVYDIPMALNRATAEQLIDFRRN
>NC_018700.1|WP_013844980.1|3465310_3466330_+|glucokinase
MPNASEHSFPFPILIGDIGGTNARFALLTDAYGEPKQLAPIRTGDFATIEEAMQKGILDKTSVQPRSAILAVAGPIKGDEIPLTNAGWVIRPKDMLASLGLEDVLVINDFEAQALAIAAPADQDVVQIGGGAVRPFHSRVVLGPGTGLGVAGLVYAQHTWIPVPGEGGHVDIGPRTERDFRIWPFLEPIEGRMAGEQILCGRGIMNLYRAVCAANGEEAVLADQAAVTTSALSGADAAAVETVSLFATYLGRVAGDMALIFMARGGVFLAGGISQKILPALTKPEFRAAFEDKAPHSALMRTIPTFAVIHPMAALSGLAAFARTPRDFGVAMEGRRWRR
>NC_018700.1|WP_010968394.1|3466438_3468244_+|ABC-transporter-ATP-binding-protein
MNAKDRNKRAVDSETITGILKRVIAENGRDHIRGYAFAIACLVVVAATTGFTAWIMEAVVNEAFANRRADIVLLICGAIFAAFVLRGLATYGQAVALSKIGNNIVARYQRRLYAHLMALSVGYFHEHRSAQLAAKVSQNVSGIRDVLNMTVTSIARDLLTLIGLVVVMFSKDWLLSLIVFFVAPPLLLGLRYISRRLRLATREAVEVNSRVLGAMQETIQGITIVKAFTMENELRRKVESIIDRAENRANRIARLSERTAPMTETFAGLAISSVLAYAAFRTIYHNVPPGAFFAFVTALLMAYDPARRLARLQVSMERAAVNARMIYEILDTVPHQRDRPDATELRLGEATVELRDVRFAYGTGEEILKGVSFRAEGGKTTALVGPSGAGKSTIISLIPRFYDPLSGEILIDGQNIAGVTKQSLRAGLAYVSQQPYLFEGSIRDNIRYGRPDATDAEIEEAARLAYAHDFILAQPQGYDTPVGEHGVTLSGGQRQRLSIARALVRNAPVLLLDEATSALDTESEAAVQKALEEAMSGRTVIVIAHRLSTVVNADKIVVMKEGIVVEEGSHEELARRPDGLYARLHNLQGSGADTVAEAQIL
>NC_018700.1|WP_010968395.1|3468261_3469080_+|4-hydroxy-tetrahydrodipicolinate-reductase
MNETDMKLVVVGAAGRMGQTLIRIIHETAGVRLHAAIERTGSPFIGRDAGELAGAGPMGVAVTDKPLEAFVEAEGVLDFTAPAATVEFAGLAAQARIVHVVGTTGCSADDEARIRAAARHARVIKSGNMSLGVNLLGVLTEKAARALPAGGWDIEILEMHHKHKVDAPSGTALLLGEAAARGRGIDLADHSVRVRDGHTGARPEGSIGFATLRGGSVIGEHSVVIAGEGEMVTLSHSATDRSIFARGAVAAALWGRSRKPGFYSMLDVLGLD

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_018700_2	2.1\|2112819\|26\|NC_018700\|CRISPRCasFinder	2112819-2112844	26	NC_018700.1	3299231-3299256	0	1.0

1. spacer 2.1|2112819|26|NC_018700|CRISPRCasFinder matches to position: 3299231-3299256, mismatch: 0, identity: 1.0

aagggatatgccgcaccgctccagtc	CRISPR spacer
aagggatatgccgcaccgctccagtc	Protospacer
**************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_018700_1	1.1\|727106\|38\|NC_018700\|CRISPRCasFinder	727106-727143	38	NZ_CP015741	Shinella sp. HZN7 plasmid pShin-05, complete sequence	7231-7268	3	0.921
NC_018700_2	2.1\|2112819\|26\|NC_018700\|CRISPRCasFinder	2112819-2112844	26	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1917475-1917500	3	0.885
NC_018700_2	2.1\|2112819\|26\|NC_018700\|CRISPRCasFinder	2112819-2112844	26	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	731785-731810	3	0.885
NC_018700_1	1.1\|727106\|38\|NC_018700\|CRISPRCasFinder	727106-727143	38	NC_011370	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence	250765-250802	4	0.895
NC_018700_2	2.1\|2112819\|26\|NC_018700\|CRISPRCasFinder	2112819-2112844	26	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	494977-495002	4	0.846
NC_018700_1	1.1\|727106\|38\|NC_018700\|CRISPRCasFinder	727106-727143	38	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1691497-1691534	5	0.868
NC_018700_1	1.1\|727106\|38\|NC_018700\|CRISPRCasFinder	727106-727143	38	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	126743-126780	5	0.868
NC_018700_1	1.1\|727106\|38\|NC_018700\|CRISPRCasFinder	727106-727143	38	NZ_CP050082	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence	188971-189008	5	0.868
NC_018700_1	1.1\|727106\|38\|NC_018700\|CRISPRCasFinder	727106-727143	38	NZ_LR723671	Rhizobium flavum strain YW14 plasmid 2	42559-42596	5	0.868
NC_018700_2	2.1\|2112819\|26\|NC_018700\|CRISPRCasFinder	2112819-2112844	26	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	1491635-1491660	5	0.808
NC_018700_2	2.1\|2112819\|26\|NC_018700\|CRISPRCasFinder	2112819-2112844	26	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	682056-682081	5	0.808
NC_018700_1	1.1\|727106\|38\|NC_018700\|CRISPRCasFinder	727106-727143	38	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	302243-302280	6	0.842
NC_018700_1	1.1\|727106\|38\|NC_018700\|CRISPRCasFinder	727106-727143	38	NZ_CP054025	Rhizobium sp. JKLM12A2 plasmid pPR12A204, complete sequence	255846-255883	7	0.816
NC_018700_1	1.1\|727106\|38\|NC_018700\|CRISPRCasFinder	727106-727143	38	NZ_CP013632	Rhizobium sp. N324 plasmid pRspN324b, complete sequence	155054-155091	8	0.789
NC_018700_1	1.1\|727106\|38\|NC_018700\|CRISPRCasFinder	727106-727143	38	NZ_CP024308	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3a, complete sequence	99915-99952	9	0.763

1. spacer 1.1|727106|38|NC_018700|CRISPRCasFinder matches to NZ_CP015741 (Shinella sp. HZN7 plasmid pShin-05, complete sequence) position: , mismatch: 3, identity: 0.921

ggcggcgaagggccggtctatccgaacatgtgaatgtc	CRISPR spacer
ggcggcgaaggcccggtctatccgaacatgtgaatttt	Protospacer
*********** *********************** *.

2. spacer 2.1|2112819|26|NC_018700|CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 3, identity: 0.885

aagggatatgccgcaccgctccagtc	CRISPR spacer
aagggatatgccgcaccgttcctgcc	Protospacer
******************.*** *.*

3. spacer 2.1|2112819|26|NC_018700|CRISPRCasFinder matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.885

aagggatatgccgcaccgctccagtc	CRISPR spacer
aagggatatgccgcaccgcttccggc	Protospacer
********************.* * *

4. spacer 1.1|727106|38|NC_018700|CRISPRCasFinder matches to NC_011370 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence) position: , mismatch: 4, identity: 0.895

ggcggcgaagggccggtctatccgaacatgtgaatgtc	CRISPR spacer
ggcggcgaagggccggtctatccgaatatgtgatcatc	Protospacer
**************************.****** ..**

5. spacer 2.1|2112819|26|NC_018700|CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 4, identity: 0.846

aagggatatgccgcaccgctccagtc	CRISPR spacer
aagggatatgccgcaccgttcttgcc	Protospacer
******************.**. *.*

6. spacer 1.1|727106|38|NC_018700|CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 5, identity: 0.868

ggcggcgaagggccggtctatccgaacatgtgaatgtc	CRISPR spacer
ggcggcgaaggcccggtctatccgaacatgtgacgtcc	Protospacer
*********** *********************   .*

7. spacer 1.1|727106|38|NC_018700|CRISPRCasFinder matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 5, identity: 0.868

ggcggcgaagggccggtctatccgaacatgtgaatgtc	CRISPR spacer
ggcggcgaaggcccggtctatccgaacatgtgagttcg	Protospacer
*********** *********************.* .

8. spacer 1.1|727106|38|NC_018700|CRISPRCasFinder matches to NZ_CP050082 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence) position: , mismatch: 5, identity: 0.868

ggcggcgaagggccggtctatccgaacatgtgaatgtc	CRISPR spacer
ggcggcgaagggccggtctatccgaatatgtaaccgac	Protospacer
**************************.****.* .* *

9. spacer 1.1|727106|38|NC_018700|CRISPRCasFinder matches to NZ_LR723671 (Rhizobium flavum strain YW14 plasmid 2) position: , mismatch: 5, identity: 0.868

ggcggcgaagggccggtctatccgaacatgtgaatgtc-	CRISPR spacer
ggcggtgaagggccggtctatccgagcatgt-aacatcg	Protospacer
*****.*******************.***** **..**

10. spacer 2.1|2112819|26|NC_018700|CRISPRCasFinder matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 5, identity: 0.808

aagggatatgccgcaccgctccagtc	CRISPR spacer
aagggatatgccgcaccgcctcacaa	Protospacer
*******************..**

11. spacer 2.1|2112819|26|NC_018700|CRISPRCasFinder matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 5, identity: 0.808

aagggatatgccgcaccgctccagtc	CRISPR spacer
aagggatatgccgcaccgcctcacaa	Protospacer
*******************..**

12. spacer 1.1|727106|38|NC_018700|CRISPRCasFinder matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 6, identity: 0.842

ggcggcgaagggccggtctatccgaacatgtgaatgtc	CRISPR spacer
ggcggtgaaggcccggtctatccgaacatgtgagttcg	Protospacer
*****.***** *********************.* .

13. spacer 1.1|727106|38|NC_018700|CRISPRCasFinder matches to NZ_CP054025 (Rhizobium sp. JKLM12A2 plasmid pPR12A204, complete sequence) position: , mismatch: 7, identity: 0.816

ggcggcgaagggccggtctatccgaacatgtgaatgtc	CRISPR spacer
ggcggcgaggggccggtctatccgaatatgtagcagcc	Protospacer
********.*****************.****..  *.*

14. spacer 1.1|727106|38|NC_018700|CRISPRCasFinder matches to NZ_CP013632 (Rhizobium sp. N324 plasmid pRspN324b, complete sequence) position: , mismatch: 8, identity: 0.789

ggcggcgaagggccggtctatccgaacatgtgaatgtc	CRISPR spacer
ggcggcgaggggccggtctatccgaacatgtagggcag	Protospacer
********.**********************...

15. spacer 1.1|727106|38|NC_018700|CRISPRCasFinder matches to NZ_CP024308 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3a, complete sequence) position: , mismatch: 9, identity: 0.763

ggcggcgaagggccggtctatccgaacatgtgaatgtc	CRISPR spacer
gggggcgaaggcccggtctatccgaacatgtagcccga	Protospacer
** ******** *******************.. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

750027 : 783330

Sinorhizobium_phage(74.19%)

head,terminase,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015007364.1\|750027_750348_-	Arc family DNA-binding protein	A0A141GF10	Brucella_phage	1.2e-10	44.4
WP_015007365.1\|750347_750602_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_015007366.1\|750598_750913_-	hypothetical protein	A0A076GCZ5	Sinorhizobium_phage	7.5e-21	54.0
WP_015007367.1\|751505_751787_+	hypothetical protein	NA	NA	NA	NA
WP_015007368.1\|751796_752549_-	helix-turn-helix domain-containing protein	A0A291AUK0	Sinorhizobium_phage	2.3e-68	57.7
WP_015007369.1\|752643_752841_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_015007370.1\|752843_753092_-	hypothetical protein	NA	NA	NA	NA
WP_015007371.1\|753178_753466_+	hypothetical protein	A0A172Q0P4	Acinetobacter_phage	6.4e-19	59.2
WP_015007376.1\|755326_755680_+	hypothetical protein	A0A076G6G6	Sinorhizobium_phage	4.6e-43	80.3
WP_015007377.1\|755676_758226_+	DNA methylase N-4	A0A1J0GPR3	Mycobacterium_phage	0.0e+00	63.7
WP_015007378.1\|758222_758576_+	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA
WP_015007379.1\|758572_759454_+	hypothetical protein	A0A1B1IPH3	uncultured_Mediterranean_phage	2.3e-46	43.1
WP_041169366.1\|759450_760275_+	DUF1376 domain-containing protein	B0VK15	Azospirillum_phage	1.1e-31	36.2
WP_015007381.1\|760216_760993_+	hypothetical protein	NA	NA	NA	NA
WP_015007382.1\|760989_761418_+	GcrA cell cycle regulator	NA	NA	NA	NA
WP_015007383.1\|761414_761942_+	hypothetical protein	NA	NA	NA	NA
WP_015007384.1\|761938_762079_+	hypothetical protein	NA	NA	NA	NA
WP_015007385.1\|762075_762687_+	hypothetical protein	A0A076G6H3	Sinorhizobium_phage	3.4e-33	39.5
WP_015007386.1\|763135_763291_+	hypothetical protein	NA	NA	NA	NA
WP_015007387.1\|763322_763553_+	hypothetical protein	NA	NA	NA	NA
WP_015007388.1\|763644_763926_-	hypothetical protein	NA	NA	NA	NA
WP_015007389.1\|764048_764669_+	hypothetical protein	F1C5D5	Cronobacter_phage	8.1e-43	44.7
WP_015007390.1\|764693_765158_+	DUF2280 domain-containing protein	A0A125RNL6	Pseudomonas_phage	7.0e-31	50.7
WP_015007391.1\|765144_766557_+\|terminase	phage terminase large subunit	D4N436	Pseudomonas_phage	7.5e-84	37.6
WP_015007392.1\|766553_767924_+	DUF1073 domain-containing protein	A0A076G6H8	Sinorhizobium_phage	6.1e-200	73.8
WP_015007393.1\|767920_769036_+	hypothetical protein	A0A076G8G2	Sinorhizobium_phage	3.5e-145	74.3
WP_003528157.1\|769038_769491_+	hypothetical protein	A0A076G7F5	Sinorhizobium_phage	1.1e-52	70.7
WP_003528159.1\|769505_770555_+	hypothetical protein	A0A076GD16	Sinorhizobium_phage	4.9e-149	74.1
WP_015007394.1\|770613_770937_+	hypothetical protein	A0A076G6Z4	Sinorhizobium_phage	1.2e-26	57.0
WP_015007395.1\|770940_771435_+	hypothetical protein	A0A076G6I4	Sinorhizobium_phage	6.4e-75	84.8
WP_015007396.1\|771434_771800_+	hypothetical protein	A0A076G8G5	Sinorhizobium_phage	7.1e-55	86.7
WP_015007397.1\|771796_771958_+	hypothetical protein	NA	NA	NA	NA
WP_015007398.1\|771969_772128_+	hypothetical protein	A0A076GD18	Sinorhizobium_phage	5.8e-06	57.1
WP_015007399.1\|772124_772388_+	hypothetical protein	NA	NA	NA	NA
WP_015007400.1\|772445_773444_+\|head	head morphogenesis protein SPP1 gp7	A0A076G6I6	Sinorhizobium_phage	2.2e-159	86.1
WP_015007401.1\|773443_773926_+	hypothetical protein	A0A076G8G8	Sinorhizobium_phage	2.9e-64	75.6
WP_015007403.1\|774101_774545_+	hypothetical protein	A0A076G7G6	Sinorhizobium_phage	2.8e-37	53.1
WP_015007404.1\|774601_775339_+	hypothetical protein	A0A076GD25	Sinorhizobium_phage	2.6e-112	84.1
WP_015007405.1\|775339_775753_+	hypothetical protein	A0A076G701	Sinorhizobium_phage	1.7e-52	80.5
WP_015007406.1\|775848_776094_+	hypothetical protein	A0A076G6J1	Sinorhizobium_phage	7.4e-32	79.5
WP_015007407.1\|776100_778974_+\|tail	phage tail length tape measure family protein	A0A076G7H2	Sinorhizobium_phage	2.6e-245	54.9
WP_015007408.1\|778977_779712_+	hypothetical protein	A0A076GD29	Sinorhizobium_phage	6.4e-95	68.4
WP_015007409.1\|779711_780311_+	hypothetical protein	A0A076G707	Sinorhizobium_phage	3.4e-86	73.9
WP_015007410.1\|780319_780739_+	hypothetical protein	A0A076G6J4	Sinorhizobium_phage	1.4e-35	51.9
WP_015007411.1\|780735_783330_+	hypothetical protein	A0A076G8H4	Sinorhizobium_phage	7.7e-236	59.7

DBSCAN-SWA_2

789268 : 795041

Sinorhizobium_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015007419.1\|789268_790237_+	chitinase	A0A076G6J8	Sinorhizobium_phage	3.7e-167	88.6
WP_153444851.1\|790237_790474_+	hypothetical protein	A0A291AUV7	Sinorhizobium_phage	9.3e-24	69.2
WP_015007420.1\|790655_791021_+	hypothetical protein	A0A076GD39	Sinorhizobium_phage	1.4e-42	73.3
WP_080599795.1\|792605_792776_-	hypothetical protein	NA	NA	NA	NA
WP_051032088.1\|792868_793843_+	ATP-dependent DNA ligase	A0A076GD42	Sinorhizobium_phage	1.3e-122	65.1
WP_010969010.1\|794422_794731_-	HigA family addiction module antidote protein	M9MUN2	Rhodococcus_phage	1.9e-08	45.6
WP_010969011.1\|794744_795041_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A222YWE2	Escherichia_phage	6.7e-19	49.0

DBSCAN-SWA_3

1288412 : 1299502

uncultured_Mediterranean_phage(80.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015007495.1\|1288412_1289447_+	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	2.0e-22	42.6
WP_013844333.1\|1289519_1290359_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.8e-32	34.7
WP_003534560.1\|1290351_1291071_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	5.7e-40	44.0
WP_003534562.1\|1291135_1292245_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.1e-10	32.6
WP_003534564.1\|1292339_1292546_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	8.2e-08	65.9
WP_013844334.1\|1292619_1293267_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_003534569.1\|1293263_1294106_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	1.7e-43	41.2
WP_003534571.1\|1294242_1295526_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.0e-101	47.0
WP_003534572.1\|1295553_1296324_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.2e-22	30.9
WP_003534574.1\|1296320_1296974_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.5e-15	35.2
WP_003534576.1\|1297145_1297799_+	hypothetical protein	NA	NA	NA	NA
WP_013844335.1\|1297963_1299502_+	LysM peptidoglycan-binding domain-containing protein	I3PV24	Clostridium_phage	1.0e-14	32.8

DBSCAN-SWA_4

1832924 : 1884116

Sinorhizobium_phage(55.0%)

head,terminase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003530010.1\|1832924_1833113_+	type II toxin-antitoxin system HicA family toxin	A0A0R6PJD4	Moraxella_phage	3.7e-15	60.0
WP_010969659.1\|1833117_1833579_+	type II toxin-antitoxin system HicB family antitoxin	A0A0U4ISP5	Pseudomonas_phage	2.6e-17	43.4
WP_015007715.1\|1834437_1834644_+	hypothetical protein	NA	NA	NA	NA
WP_015007716.1\|1834898_1835171_+	hypothetical protein	NA	NA	NA	NA
WP_015007717.1\|1835181_1835490_-	hypothetical protein	NA	NA	NA	NA
WP_041169323.1\|1835601_1836576_-	ATP-dependent DNA ligase	A0A076GD42	Sinorhizobium_phage	1.5e-120	65.9
WP_015007719.1\|1836668_1836839_+	hypothetical protein	NA	NA	NA	NA
WP_015007721.1\|1837343_1837517_-	DUF3606 domain-containing protein	NA	NA	NA	NA
WP_017264856.1\|1838532_1838733_-	hypothetical protein	NA	NA	NA	NA
WP_014526862.1\|1838785_1839151_-	hypothetical protein	A0A076GD39	Sinorhizobium_phage	1.2e-41	71.7
WP_015007722.1\|1839205_1839448_-	hypothetical protein	J7F8X5	Agrobacterium_phage	1.9e-16	61.8
WP_015007723.1\|1839569_1840538_-	chitinase	A0A076G6J8	Sinorhizobium_phage	3.5e-165	87.3
WP_015007726.1\|1841899_1842229_-	hypothetical protein	A0A291AUN7	Sinorhizobium_phage	3.7e-26	71.9
WP_015007727.1\|1842215_1842566_-	hypothetical protein	A0A2H4J9Z7	uncultured_Caudovirales_phage	2.0e-22	51.4
WP_015007728.1\|1842565_1843666_-	hypothetical protein	A0A291AUN5	Sinorhizobium_phage	9.7e-31	55.8
WP_015007729.1\|1843677_1845186_-	hypothetical protein	A0A2D2W219	Sinorhizobium_phage	6.2e-278	92.0
WP_015007731.1\|1845486_1845657_-	hypothetical protein	A0A2D2W212	Sinorhizobium_phage	2.2e-11	72.1
WP_015007732.1\|1845670_1848418_-\|tail	phage tail protein	A0A291AUN1	Sinorhizobium_phage	3.8e-257	61.4
WP_015007733.1\|1848424_1848829_-	hypothetical protein	A0A291AUN0	Sinorhizobium_phage	5.8e-50	74.6
WP_015007734.1\|1848938_1849400_+	hypothetical protein	NA	NA	NA	NA
WP_015007735.1\|1849435_1850026_-	hypothetical protein	A0A291AUM8	Sinorhizobium_phage	1.2e-72	68.5
WP_028010016.1\|1850022_1850676_-	hypothetical protein	A0A291AUM9	Sinorhizobium_phage	1.4e-56	56.4
WP_014529559.1\|1850739_1851135_+	hypothetical protein	NA	NA	NA	NA
WP_015007737.1\|1851131_1853222_-\|tail	phage tail length tape measure family protein	A0A076G7H2	Sinorhizobium_phage	2.3e-17	64.4
WP_015007738.1\|1853281_1853677_+	hypothetical protein	NA	NA	NA	NA
WP_015007739.1\|1853690_1853924_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_041169324.1\|1853953_1854283_-	hypothetical protein	NA	NA	NA	NA
WP_015007741.1\|1854285_1854687_-	hypothetical protein	NA	NA	NA	NA
WP_011976017.1\|1854701_1855187_-	hypothetical protein	A0A2D1GNF2	Pseudomonas_phage	2.4e-10	30.9
WP_015007742.1\|1855188_1855614_-	hypothetical protein	NA	NA	NA	NA
WP_015007743.1\|1855820_1856264_-	hypothetical protein	A0A076G8G8	Sinorhizobium_phage	2.2e-18	38.7
WP_015007744.1\|1856263_1857301_-\|head	head morphogenesis protein	A0A076G6I6	Sinorhizobium_phage	3.8e-77	49.7
WP_015007745.1\|1857379_1857889_+	lipocalin family protein	A0A1W6JNX6	Morganella_phage	1.6e-20	37.5
WP_015007746.1\|1858046_1858190_+	hypothetical protein	NA	NA	NA	NA
WP_015007747.1\|1858186_1858552_-	hypothetical protein	A0A076G8G5	Sinorhizobium_phage	1.3e-45	75.0
WP_015007748.1\|1858632_1858794_+	hypothetical protein	NA	NA	NA	NA
WP_015007749.1\|1858814_1859309_-	hypothetical protein	A0A059VG19	Pseudomonas_phage	8.5e-19	43.5
WP_015007750.1\|1859360_1859702_-	hypothetical protein	A0A2H4J908	uncultured_Caudovirales_phage	3.0e-07	56.0
WP_015007751.1\|1859716_1860685_-	DUF2184 domain-containing protein	A0A2H4J526	uncultured_Caudovirales_phage	7.8e-141	76.3
WP_015007752.1\|1860710_1861181_-	hypothetical protein	A0A2H4J1G1	uncultured_Caudovirales_phage	7.8e-38	61.5
WP_015007753.1\|1861193_1862339_-	DUF2213 domain-containing protein	A0A2R3UA67	Siphoviridae_environmental_samples	2.5e-77	46.6
WP_015007754.1\|1862387_1863236_+	hypothetical protein	NA	NA	NA	NA
WP_015007757.1\|1864642_1865974_-	DNA-packaging protein	Q1WDG8	Streptomyces_phage	5.8e-38	32.8
WP_015007758.1\|1865977_1866478_-\|terminase	terminase small subunit	A0A076GD11	Sinorhizobium_phage	1.4e-29	44.4
WP_013844190.1\|1866500_1866776_+	hypothetical protein	NA	NA	NA	NA
WP_015007760.1\|1866795_1866951_-	hypothetical protein	NA	NA	NA	NA
WP_015007761.1\|1867041_1867260_+	hypothetical protein	NA	NA	NA	NA
WP_015007762.1\|1868028_1868646_-	hypothetical protein	A0A076G6H3	Sinorhizobium_phage	2.2e-32	39.6
WP_015007763.1\|1868642_1869089_-	hypothetical protein	NA	NA	NA	NA
WP_015007764.1\|1869085_1869862_-	hypothetical protein	NA	NA	NA	NA
WP_038439144.1\|1869803_1870199_-	hypothetical protein	M9Q2G6	Clostridium_phage	8.3e-09	41.9
WP_127641781.1\|1870542_1871352_-	hypothetical protein	A0A1B1IPH3	uncultured_Mediterranean_phage	2.9e-56	45.3
WP_015007767.1\|1871449_1871665_-	hypothetical protein	A0A076G6Y4	Sinorhizobium_phage	7.7e-09	54.7
WP_015007769.1\|1871903_1873034_-	site-specific DNA-methyltransferase	A0A1B0VM49	Pseudomonas_phage	6.9e-64	39.8
WP_086017957.1\|1873030_1873213_-	hypothetical protein	NA	NA	NA	NA
WP_003528128.1\|1873230_1873608_-	hypothetical protein	NA	NA	NA	NA
WP_015007772.1\|1873936_1874140_-	hypothetical protein	NA	NA	NA	NA
WP_015007773.1\|1874273_1875104_-	DUF2312 domain-containing protein	A0A0F6R615	Sinorhizobium_phage	9.3e-10	53.5
WP_015007774.1\|1875100_1875343_-	hypothetical protein	NA	NA	NA	NA
WP_041169327.1\|1875447_1876164_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_015007777.1\|1876560_1877427_+	three-Cys-motif partner protein TcmP	NA	NA	NA	NA
WP_015007778.1\|1877416_1878163_-	DUF5131 family protein	I3UM26	Rhodobacter_phage	2.0e-51	43.7
WP_015007779.1\|1878412_1878646_+	hypothetical protein	NA	NA	NA	NA
WP_015007780.1\|1878642_1878903_+	hypothetical protein	NA	NA	NA	NA
WP_015007781.1\|1878902_1879139_+	hypothetical protein	A0A076G7C7	Sinorhizobium_phage	2.6e-18	56.4
WP_015007782.1\|1879138_1879666_+	siphovirus Gp157 family protein	NA	NA	NA	NA
WP_015007783.1\|1879669_1880632_+	phage recombination protein Bet	NA	NA	NA	NA
WP_015007784.1\|1880633_1881155_+	hypothetical protein	B0VK83	Azospirillum_phage	4.6e-31	43.7
WP_015007785.1\|1881151_1881580_+	hypothetical protein	NA	NA	NA	NA
WP_015007786.1\|1881576_1881891_+	hypothetical protein	Q8W6F7	Sinorhizobium_phage	1.2e-37	74.0
WP_127641776.1\|1882765_1883419_+	HNH endonuclease	A0A2H4IZP3	uncultured_Caudovirales_phage	7.3e-10	44.2
WP_015007790.1\|1883408_1884116_+	hypothetical protein	Q8W6F5	Sinorhizobium_phage	2.2e-36	42.3

DBSCAN-SWA_5

2171632 : 2198544

uncultured_virus(33.33%)

terminase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010967204.1\|2171632_2172835_-\|transposase	IS256-like element ISRm3 family transposase	A0A218MNI5	uncultured_virus	1.0e-41	43.3
WP_011970372.1\|2173499_2174063_-	UPF0149 family protein	NA	NA	NA	NA
WP_013845336.1\|2174059_2175634_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	1.1e-51	32.0
WP_013845337.1\|2175682_2176039_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_013845338.1\|2176035_2176506_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_012061712.1\|2178332_2179925_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	7.4e-56	34.2
WP_012061711.1\|2179999_2180344_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	8.6e-10	30.6
WP_127630246.1\|2180340_2180691_-\|transposase	transposase	NA	NA	NA	NA
WP_014526947.1\|2181262_2181601_+	hypothetical protein	NA	NA	NA	NA
WP_013844671.1\|2181620_2182421_-	sulfotransferase	NA	NA	NA	NA
WP_010969843.1\|2182601_2183228_-	hypothetical protein	NA	NA	NA	NA
WP_013844672.1\|2183424_2184036_-	AAA family ATPase	A0A0R8V1H3	Thermobifida_phage	6.6e-05	40.7
WP_017265049.1\|2184020_2184194_+	hypothetical protein	NA	NA	NA	NA
WP_010969846.1\|2185081_2186650_+	MBOAT family protein	A0A125RNP0	Pseudomonas_phage	1.5e-45	32.6
WP_015007823.1\|2186653_2187883_+	hypothetical protein	NA	NA	NA	NA
WP_015007824.1\|2187944_2188196_+	acyl carrier protein	NA	NA	NA	NA
WP_015007825.1\|2188231_2190187_+	HAD-IIIC family phosphatase	NA	NA	NA	NA
WP_107358417.1\|2190293_2190413_-	DUF2280 domain-containing protein	NA	NA	NA	NA
WP_014526950.1\|2190485_2190785_+	hypothetical protein	NA	NA	NA	NA
WP_010969850.1\|2190798_2191110_-	hypothetical protein	NA	NA	NA	NA
WP_041169331.1\|2191443_2192022_-	hypothetical protein	NA	NA	NA	NA
WP_080599772.1\|2192148_2192607_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_013845259.1\|2192587_2192941_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	7.2e-20	46.2
WP_014989244.1\|2192995_2194588_+\|transposase	IS66-like element ISRm2 family transposase	S5VTP8	Leptospira_phage	6.8e-25	37.1
WP_015007828.1\|2194632_2195340_-	hypothetical protein	NA	NA	NA	NA
WP_015007829.1\|2195573_2195804_+	hypothetical protein	NA	NA	NA	NA
WP_157226428.1\|2195891_2196353_+	hypothetical protein	NA	NA	NA	NA
WP_015007831.1\|2196529_2197012_+	hypothetical protein	NA	NA	NA	NA
WP_015007833.1\|2197770_2198544_+\|terminase	prophage MuMc02, terminase, ATPase subunit, putative	R4T8V9	Halovirus	2.7e-19	31.6

DBSCAN-SWA_6

2216618 : 2226252

Vibrio_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003532953.1\|2216618_2218673_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-35	33.6
WP_013844736.1\|2219105_2220140_-	L-threonine 3-dehydrogenase	R9TPW0	Vibrio_phage	4.1e-15	68.6
WP_010969853.1\|2220163_2221351_-	glycine C-acetyltransferase	D2TEZ5	Emiliania_huxleyi_virus	9.2e-35	27.8
WP_015007845.1\|2221600_2223520_-	DNA helicase RecQ	A0A1V0SBK0	Catovirus	1.1e-74	35.7
WP_010969855.1\|2223565_2225569_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.5e-87	41.5
WP_003532937.1\|2225802_2226252_-	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	3.0e-15	38.4

DBSCAN-SWA_7

2258018 : 2316968

Klosneuvirus(16.67%)

holin,transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010969874.1\|2258018_2258738_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_003534512.1\|2258793_2259099_-\|protease	ATP-dependent Clp protease adapter ClpS	NA	NA	NA	NA
WP_010969876.1\|2259329_2260433_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_013844745.1\|2260639_2260810_-	hypothetical protein	NA	NA	NA	NA
WP_003534506.1\|2260905_2261361_+	MaoC family dehydratase	NA	NA	NA	NA
WP_010969877.1\|2261357_2261828_+	MaoC family dehydratase	NA	NA	NA	NA
WP_003534501.1\|2261873_2262416_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.5e-35	45.5
WP_010969878.1\|2262590_2262776_+	DUF1059 domain-containing protein	NA	NA	NA	NA
WP_010969879.1\|2262794_2264054_-\|tRNA	CCA tRNA nucleotidyltransferase	A0A1B0V011	Roseobacter_phage	4.3e-51	42.1
WP_010969880.1\|2264050_2264683_-	CoA pyrophosphatase	NA	NA	NA	NA
WP_003534495.1\|2264679_2265303_-	DUF1285 domain-containing protein	NA	NA	NA	NA
WP_013844747.1\|2265661_2266675_+	MoxR family ATPase	NA	NA	NA	NA
WP_010969883.1\|2266678_2267599_+	DUF58 domain-containing protein	NA	NA	NA	NA
WP_010969884.1\|2267595_2270409_+	DUF4159 domain-containing protein	NA	NA	NA	NA
WP_015007847.1\|2270419_2272489_+	membrane protein	NA	NA	NA	NA
WP_010969886.1\|2272503_2273055_-	N-acetyltransferase	NA	NA	NA	NA
WP_015007848.1\|2273312_2274305_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_010969888.1\|2274470_2274677_+	antitoxin VbhA family protein	NA	NA	NA	NA
WP_010969889.1\|2274739_2275648_+	cell filamentation protein	NA	NA	NA	NA
WP_010969890.1\|2275772_2276264_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_003534453.1\|2276346_2277249_+	metallophosphoesterase	NA	NA	NA	NA
WP_010969891.1\|2277442_2277958_+	RNA polymerase sigma factor	NA	NA	NA	NA
WP_003534449.1\|2277961_2278789_+	anti-sigma factor	NA	NA	NA	NA
WP_003534446.1\|2278911_2279340_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_010969893.1\|2279336_2279588_-	type II toxin-antitoxin system VapB family antitoxin	NA	NA	NA	NA
WP_010969894.1\|2279725_2281435_-	2-isopropylmalate synthase	NA	NA	NA	NA
WP_003534438.1\|2281906_2282494_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.1e-28	37.3
WP_010969898.1\|2285477_2285942_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.1e-28	47.1
WP_010969899.1\|2285938_2286859_-	cation transporter	NA	NA	NA	NA
WP_010969900.1\|2287027_2289217_-	anthranilate synthase	NA	NA	NA	NA
WP_010969901.1\|2289490_2291722_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA
WP_017272446.1\|2291998_2292832_+	extensin family protein	NA	NA	NA	NA
WP_013844754.1\|2292992_2294699_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_010969904.1\|2294762_2295986_-	DUF2333 family protein	NA	NA	NA	NA
WP_010969905.1\|2295989_2297279_-	hypothetical protein	NA	NA	NA	NA
WP_010969906.1\|2298801_2299206_-	DUF559 domain-containing protein	NA	NA	NA	NA
WP_010969907.1\|2299318_2301235_-	ATP-binding protein	NA	NA	NA	NA
WP_010969908.1\|2301238_2302387_-	hypothetical protein	NA	NA	NA	NA
WP_003535848.1\|2302448_2303537_-	hypothetical protein	NA	NA	NA	NA
WP_010969910.1\|2303697_2304285_-	thymidine kinase	A0A0K2FHC3	Enterobacter_phage	4.1e-52	54.7
WP_010969911.1\|2304571_2305528_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_013844756.1\|2305684_2306530_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_015007851.1\|2306526_2307576_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.9e-20	33.7
WP_013844757.1\|2307609_2308353_+	HugZ family protein	NA	NA	NA	NA
WP_013844758.1\|2308471_2308816_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010969916.1\|2308961_2309495_+	ATP-binding protein	NA	NA	NA	NA
WP_010969917.1\|2309584_2310913_+	aspartate aminotransferase family protein	NA	NA	NA	NA
WP_013844760.1\|2311000_2312698_+	adenine deaminase	NA	NA	NA	NA
WP_013844761.1\|2312881_2314525_-	alpha-glucosidase	NA	NA	NA	NA
WP_010969920.1\|2314659_2315577_+	sugar kinase	NA	NA	NA	NA
WP_003537933.1\|2315804_2316968_-\|transposase	IS4-like element ISRm16 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NC_018701

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_018701_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018701_1

634103-634220

Orphan

Consensus_repeat	Method
TGCCGCCCGCACCGCCGCTGCCGCCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018701_1

>merge|NC_018701|1|634103-634220|CRISPRCasFinder
GATCGACCTCGCCGCCGCTACCGCCGACACCGCCGCTGCCGCCGACGACGAGATCGATCGTGTGGCTGTGCTCTTTTTCGGCGGCCGTGCTGCTTCCGGCGCCGCCGACGCCGCCGCC

>NC_018701|1|1|634103-634220|CRISPRCasFinder
GATCGACCTCGCCGCCGCTACCGCCGA	CACCGCCGCTGCCGCCGACGACGAGATCGATCGTGTGGCTGTGCTCTTTTTCGGCGGCCGTGC
TGCTTCCGGCGCCGCCGACGCCGCCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_018701.1\|WP_017266907.1\|627659_628169_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379237
NC_018701.1\|WP_015008254.1\|624633_626415_-\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|179625
NC_018701.1\|WP_010975822.1\|651183_652458_-\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|131388
NC_018701.1\|WP_015008259.1\|638826_639978_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NC_018701.1\|WP_013850618.1\|629282_630497_-\|YeeE/YedE-family-protein	unknown	unknown	gnl\|CDD\|377230
NC_018701.1\|WP_014527144.1\|649729_651187_-\|phosphonoacetaldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|132294
NC_018701.1\|WP_010975842.1\|620733_621357_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991
NC_018701.1\|WP_015008263.1\|644882_646925_-\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274495
NC_018701.1\|WP_015008255.1\|626911_627505_+\|hypothetical-protein	unknown	unknown	unknown
NC_018701.1\|WP_014527145.1\|652485_653682_-\|2-aminoethylphosphonate--pyruvate-transaminase	unknown	unknown	gnl\|CDD\|184076
NC_018701.1\|WP_010975843.1\|619643_620534_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NC_018701.1\|WP_010975841.1\|621353_622331_+\|xanthine-dehydrogenase-family-protein-subunit-M	unknown	unknown	gnl\|CDD\|224238
NC_018701.1\|WP_010975825.1\|648183_649206_-\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274494
NC_018701.1\|WP_015008253.1\|622327_624553_+\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	unknown	unknown	gnl\|CDD\|224446
NC_018701.1\|WP_013850619.1\|630603_631515_-\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NC_018701.1\|WP_015008257.1\|628331_628919_-\|hypothetical-protein	unknown	unknown	unknown
NC_018701.1\|WP_015008261.1\|640835_641234_-\|hypothetical-protein	unknown	unknown	unknown
NC_018701.1\|WP_015008260.1\|639965_640748_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NC_018701.1\|WP_015008262.1\|641359_644698_-\|pre-peptidase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|225483
NC_018701.1\|WP_014527142.1\|646930_648094_-\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274496

Protein	Function_ID	Function_description	E-value
NC_018701.1\|WP_017266907.1\|627659_628169_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379237	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.94853e-16
NC_018701.1\|WP_015008254.1\|624633_626415_-\|cation:proton-antiporter	gnl\|CDD\|179625	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional.	4.67675e-171
NC_018701.1\|WP_010975822.1\|651183_652458_-\|phosphonoacetate-hydrolase	gnl\|CDD\|131388	TIGR02335, phosphonoacetate_hydrolase, phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.	1.66756e-171
NC_018701.1\|WP_015008259.1\|638826_639978_+\|histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	2.79311e-171
NC_018701.1\|WP_013850618.1\|629282_630497_-\|YeeE/YedE-family-protein	gnl\|CDD\|377230	pfam04143, Sulf_transp, Sulphur transport. This is an integral membrane protein. It is predicted to have a function in the transport of sulphur-containing molecules. It contains several conserved glycines and an invariant cysteine that is probably an important functional residue.	3.00966e-65
NC_018701.1\|WP_014527144.1\|649729_651187_-\|phosphonoacetaldehyde-dehydrogenase	gnl\|CDD\|132294	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase. This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.	0
NC_018701.1\|WP_010975842.1\|620733_621357_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	1.51434e-78
NC_018701.1\|WP_015008263.1\|644882_646925_-\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	gnl\|CDD\|274495	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein. [Transport and binding proteins, Amino acids, peptides and amines].	0
NC_018701.1\|WP_014527145.1\|652485_653682_-\|2-aminoethylphosphonate--pyruvate-transaminase	gnl\|CDD\|184076	PRK13479, PRK13479, 2-aminoethylphosphonate--pyruvate transaminase; Provisional.	0
NC_018701.1\|WP_010975843.1\|619643_620534_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.94942e-30
NC_018701.1\|WP_010975841.1\|621353_622331_+\|xanthine-dehydrogenase-family-protein-subunit-M	gnl\|CDD\|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	1.14193e-90
NC_018701.1\|WP_015008253.1\|622327_624553_+\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	gnl\|CDD\|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	0
NC_018701.1\|WP_013850619.1\|630603_631515_-\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	8.12689e-90
NC_018701.1\|WP_010975825.1\|648183_649206_-\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274494	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein. This ABC transporter extracellular solute-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NC_018701.1\|WP_015008260.1\|639965_640748_+\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	9.4449e-67
NC_018701.1\|WP_015008262.1\|641359_644698_-\|pre-peptidase-C-terminal-domain-containing-protein	gnl\|CDD\|225483	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.09264e-24
NC_018701.1\|WP_014527142.1\|646930_648094_-\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274496	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0

>NC_018701.1|WP_013850619.1|630603_631515_-|sulfurtransferase
MRIASLAFTLSVLASSALAADISPLVDAEWVKANAGDKDVVILDIRDKVAETELGDKPYIQGAVVAPYASAGWRTEVGGVPGMLPPLEQITKLIGDLGIDNDDHVVIVPWGTDSTEFGGATRVYWTFKYLGHEEVSILDGGWRQYDAAGGTRSAEAVKPEPATFHAEPQEKLLATTEEVAAALKAGVKLIDGRPAEQHQGKSKSPVVRANGTIPGSINIEHSKLYSQDHALFARPETVKALTEAAGLAAEEENITFCNTGHWASVTWFALSEVLGNKNTTMYDGSMAEWTADPARPVENKSGT
>NC_018701.1|WP_013850618.1|629282_630497_-|YeeE/YedE-family-protein
MTDISFDRSRYLPSAVVDRGPALVAGGALLIGLLVIAQLIDLRQAALFVVGGLLGVALYHGSFGFTGGWRRMVVERRGRGIRAQMLMIGVAALAMIPLISAGSLGGQPLVGALAPVGVSVLVGAAMFGLGMQLGGGCGSGTLFTVGGGSARMLVTLTFFIVGALIGSAHLPWWLTLPSFGTIDLGRQLGTGTAILATLAGLGLVALATALIERRAHGNIEREPEPSRPGWTWLLYGPWPLVGAGLLMALLNVATLLLAGHPWSVTFGFGLWGAKAAQAVGVPVATWEFWNWPGPQAALSASVLADVTSVMNFGIVLGAAAAASLAGKFAPKAKIPLGSMLAAVVGGLLMGYGARLSFGCNIGALFSGIASGSLHGWLWFATAFVGSFVGIWMRPLFGLDGFKKK
>NC_018701.1|WP_015008257.1|628331_628919_-|hypothetical-protein
MAEEAVELARREIAYCETLLAKGGLNVLSETFRDTAEIKAWDHYPTGDVFDPTSGAQWFYHCHPAEEGAEEHGHFHCFLRPQGPQGPIHHLAAVGVDAHGRLLRLFTVNQWVVGDDWLGAEGTIALLPRFDVQMPRPSYLVNRWLTAIFTAYEQQITELIRERDRTLLAHRQPESVEARQDRALEVTSEFKLSGR
>NC_018701.1|WP_017266907.1|627659_628169_-|GNAT-family-N-acetyltransferase
MIEFRSLTEADFLMLCEWLNSPHMRAHYQKTPITIEEVQGKYSERLSPSHPTHCHIARYNGEPFGMLQCYSLRNYPDFASEIGEQDGVAVDLFIGEERFIGKGFGKAMLRSYVLNVVPSIFPQDCKCFICHAKENKIAIRGSLSAGFLPYRDVIERGVESLLLSFDRPI
>NC_018701.1|WP_015008255.1|626911_627505_+|hypothetical-protein
MLWNIQLVLFLSKAFDHLIDATMIIDHADGRRFSFDGAPTLYTLKPGIKKDPVRRWALPDRVFFGNGACAILAGVFLSEAPLPGFYAERIIPGEGFAGNHIFVTDGVIAFDHHGYSLRSRLLTYHTNGWAGRSPEGWNCRLERVTFDLLDRRDLNDNQMLGREQYLHDPIVRAKTYLGRVNHAEASARARAKNGAAI
>NC_018701.1|WP_015008254.1|624633_626415_-|cation:proton-antiporter
MAAESHGIDLLPVIALLGAAVVAAPLFKRIGLGSVLGYLAAGIAIGPFGLRLLQEPSSILHVAELGVVMFLFIIGLEMRPSRLWGLRREIFGLGIVQVALCALLLTGVGVLTGFPVAPSFVAGAGFVLTSTAIVMQLLEERREMAAPKGQRIVSILLVEDMAIVPLLALVAFLAPIVPGSVAASGAIDWLSIAIGLVTIAGLVLAGRYLLNPLFGLIASVEAREVMTAAALMVVLGSAYVMQLGGLSMAMGAFLAGVLLSESTFRHQLEADVEPFRGILLGLFFLAVGMSLDLGVIARNWAMILFYVAAYMVVKAIVIYLVARLFGASNWEAIERAVFMAQGGEFAFVLYAAALGTGIISGEENAILTAIIIVSMMVTPLLIAALRLVERNIPLSTDGVERPENLSGNVLIIGFGRVGQIVSQVLLTRGHVISIIDTDVEMINTAREFDFKVYYGDGKRLDILHAAGAERASAIVVCVDKADDATKIVELIKAEFPLIPVLARASDRRHALDLITAGADFHIRETFESSLVLGQKALEALGADLPEVAEIIEKVRQRDEKRLELELVGGLYAGRPLFSGKLEPVEAVPPGGSA
>NC_018701.1|WP_015008253.1|622327_624553_+|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit
MTTAIGKSLSRIDGRLKVTGQATYAAEFNQEGQAHAVIVGSTVGLGRIESIDSAAVEKMPGVVAVISHLNAQRLAYNEHRGPIDPPAGERLHVLQGSEVRFFGEPVAIVVAETLDQAEHAANALKVTYSARQPQVDAHAGERVIPAVARRPGARAEADVARGDADKALETAAVKVEAEYVIARENHNPMEPHATIAAWNGDRLTLWSKSQFVVNEQAEIAAIFGLPPENVQVICPFIGGAFGTSLRTWPHVTLAALAARHVNRPVKLVLTRKQMFFATGHRPYTLQRIALGAQPDGKLIGIVHEGAGETSRYEEFMEALTSVTSFMYSCPNVRTSYRLIPLDASTPTYMRGPGEASGIHALECAVDELAYKLQMDPIDLRRINEPQIDEGRQVPFSSRSMLKCYDLGAERFGWSRRTPEPGSMRDGRLLIGYGMANASYPCLFAPASARVRLLPDGTVEVEAAASDMGPGTYTSMSQVAAEYLGIPVERIRFSLGRSDFPATPPHGGSMTMASVGSAIRAACLDLQAKAAVLAAKGGGNAGLAGQSPEALEWRDGMLFVKGRSDRGVTYADLVSYGGESPLVGEGTAARDAETGQKYSMHSFGAVFAEVAIDPDVKTIKVRRALGAYGVGRVVNPKLATSQCIGGMIGGIGMAIMERTLLDRRNGRPINAHMADYLVPVNLDTPHIEAHFIDEEDTIVNPLGVKGLGEIALVGMSAAVSNAIHHATGRRVHELPIMIESLL
>NC_018701.1|WP_010975841.1|621353_622331_+|xanthine-dehydrogenase-family-protein-subunit-M
MRPFEFQRAASESEAIAAGAAGARYLAGGTTLVDLMREEVETPEKIVDINRLPLNYIRATDEAIVIGALARMSEVAANQDVRRLQPLIPETLTEGASPQLRNVASIGGNLLQRVRCPYFRMLDAPCNKRVPGSGCSAIDGLNAGHAILGTSEHCVATHPSDLAVSLVALGAMLSLKGPRGERTIPVEELFRLPESTPHLEHTLEPGELIVEVHIPNGPYARKARYLKVRDRSSYEFALVSAAAALHVENGIIKEVRIAAGGVGTRPWRMNAVEQALVGKPAARASYEIAAAVSTEETRPLSHNGFKVKLLPATIVRALEMAGDVA
>NC_018701.1|WP_010975842.1|620733_621357_+|(2Fe-2S)-binding-protein
MTDETAELHPPGLTMSRREALQATAGAVAFAALPLPAEAAADSTATPAPPTHTLPLEVTVNGRVHQLVVDPRLSVLDMLRERLSLTGTKKGCNQGACGACTVLIDGQRVNACLALAVMYDGAKITTIEGVAEGEALHPLQVAFIEHDAFQCGYCTSGQIMSGLGCISEGHASSAEEISYWMSGNICRCGAYPGIVAAVAQAAKEDRT
>NC_018701.1|WP_010975843.1|619643_620534_+|helix-turn-helix-transcriptional-regulator
MGGKALADTTAHIRRLQRGLSPPLVAEVFSDDTRLVGRWWNKPFEYELPPLKDHVLSAKYSGQGMASVKIGGQTISAPAAMGTITLAPRGHGGFWRADGHVEVSNIFLGHKRLLASADQVGNGREPELLDRVNFSDPKLFTIMALINDEINSGDAISHLYIDQLLDLVCLQLLRAHSASSMPISPGPQRGLSGWQVKRVTGYMRENMAEDIRIQELADLVNLSRFHFCTAFRMATGQTPYGWLTRQRIAYAKTLLRDMKLRVNDIALAVGYETQSAFAASFRKAVGITPTEFRRRL
>NC_018701.1|WP_015008259.1|638826_639978_+|histidine-kinase
MVVIAEPDLLPDLSGSHIADPSYRRSRTKRKFNGSGTVLVGALGSFWRAQTAGWLFGALFAVVSRILAFEDVAFAFALTAVLEPLGFALTTLAYRIFRHRIGGVTLTVVAVALALSIAGGVLQMLIANAMKDVLQPNIDPDYGANGSVIPAIYYTLIFLGWSLAYLWIKADADARKQRMRRHRAREEALRAELHQLRLQLDSHFLFNVLNTVAMEIPEEPDTALEMIHRITAYLRYLLENQTRRICPLSDEIEAMMAYIRIQELRFEGRLDCVVEVDPAARPVAVPHLILQPLVENAVKHGLRSPASRFAVGITVECRDADLFIEISNPGRLEAGERDRPPIGLANIRRRLELHYPLGHALTLIQAGDKVIARLMLRGVACFA
>NC_018701.1|WP_015008260.1|639965_640748_+|response-regulator-transcription-factor
MLRVMVVDDEPPARRGLKRLMQAHPDVEVVGEAGSLDQAHQLTHALRPDAIFLDIDLGDDDGFGLIKRLDQVPAIVFVTGHGTYAPQAFDVAALDFLLKPVERQRLALTLERLRRYRHALELGEKVLGDTTTVPPVAMPGRRRLHIRMAGQTLVLPTDGIAMLAAEADFTRIVMADARDHLVCRLLGQFDAELPTPPFFRVSRSLIINLDRVVRVRSQDKGRSLLSLGRSLTPIMLGRVATTRLRRALDGFQRVGTVPDG
>NC_018701.1|WP_015008261.1|640835_641234_-|hypothetical-protein
MKRPTDRRTVLMTAGAAAVAAVAGPVAAQSPDIRGAVTFEGGAVPEGHLEIYLEDPAIQDEARRRATETRIKSDGTSTSIAFSLSPPASVNASPTLRIVARLERADGWLVARGSTRFEAGSPVYVTLNPVMY
>NC_018701.1|WP_015008262.1|641359_644698_-|pre-peptidase-C-terminal-domain-containing-protein
MPNPSQTSDNWWINDQTPDNPYGKSEDYESFLDYLGALPRSLTPEMAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVDDTPFDSTTDWMEVVSPELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVGETSRWSASTPLMADIEAVIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGVDTIDFSGSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDILIGNDGANTLDGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANVENIIYADESTTQPGGGGASPPIAGDNTMTSIIFGGNGNDTLDGGAGDDTIFGKGGDDLIIGGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDVLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFHSIENLIGSDDRIDRFIGTSAANHFWGQGGGDYFNGGGGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYAGSPDGVTIDLANGTASGGDGDGPVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDTLTGGGGADRLNGGAGSDTADYADATSGLRLGLAGGRSGGDTYVSIENLAGSGFGDRLTGNGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAPPRPGMGSGYATLGPDAANNSIAAAFDISNNFSLTSDPDIFDSTTILHTTVNATGNGQGGYYKIDLAAGTVITIDIDGIADPNVHDSWVRLLDSAGNIVAQNDDGGGDPGSTSNRDSSLVFVAQETGTYYILEGSWSPTAPGDGWAEAVPAGSTYELNVSVEFPPQPAQPGVAGSDTLIGGGGSDLLDGGLAADTLTGGAGEDTFRFSTALGNGNVDWIKDFNVIDDTILLDNLIFESVGGEGALALGAFYGSAGGVAHDADDRIIYDADSGVLSYDADGAGEIAAIQYAQLSTNLKLSAADFIII
>NC_018701.1|WP_015008263.1|644882_646925_-|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit
MTLAVDFLPPGRAVRQQISGDDWLKRAVMLVVGIYLVVALALPLFVMLSKSFSTYTFDLHQFEFQVSDQSGQGWSDPVTAAALNAAVAAFPESDLKASADGRLQAAKLFPDFSFRSPVRYRIRGTSDETHFLAGSQLVRGTAWEEYDSNNFRRVMLRPSRSIGLSNFAEYFSTPSLVRSIKNSVTMALISTAVTLVVAFGLAYALNRSRMPGKGLFKLIVTIPILVPSLLPGIALVYLFGNQGVFRDLLLGHSIYGPLGIVVGSVFFTLPHAFLIISTALSVADARHYEAATSLRASKWRTFWTVTVPGARYGLISAAFVVFTLVITDFGLPKVIGGQYGMLAVDIYKQVIGQQNFEMGAVVSVILLVPAFLAFAVDRLTQRRQVALLSARAVPYEPKPRRGFDAACFAFCTLVAVFVLGMIGMCQVAALVKFWPYDLSLSLRNYAFDLMDGGGWDSYYNSIRLALMTAVIGSLIVFTGAYMVEKTKGFGLGRATFHMLAMLPMAVPGMVLGLAYIFFFNSAANPLHGIYGTMTILVLCTVTHFYTVAHLTALTALKQLDPEFEAVACSLKIPFYKLFFRVTLPVCLPAVLEIAIYLFVNAMTTVSAVVFLYATDTKLASVAILNMDDAGDIAPAAAMGMMIFYTNVAAKLLHAFVSRLLLARTQGWRRVSQSAAATVPH
>NC_018701.1|WP_014527142.1|646930_648094_-|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein
MKHATAPAEPAMPASATRQIEGRPFLEIDGLWKAYGDFVALRDIDLQVKEGEFICFLGPSGCGKTTLLRAIAGLDIQSRGTICQGGQDISRLPPAQRDYGIVFQSYALFPNLTIEKNIAFGLENIGRPRREIASRVSELLELVGLSSQGRKYPAQLSGGQQQRVALARAMAISPGLLLLDEPLSALDAKVRVHLRHEIKELQRKLGVTTIMVTHDQEEALAMADRIVVMNQGGIEQVGTPTEIYRHPKTLFVADFIGETNQFPATVGKGAQVEIGHTRFACAEHRLPSGASVVAAVRPADIIPHGAAAHRATGLDAVGNADNLIDAHVEDMEFLGMFWRTRLSAPRLKEKALVADFSTNAVRRLSIEIGSAIQVEIPQERLLLFAKA
>NC_018701.1|WP_010975825.1|648183_649206_-|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein
MPFSKIFLGAGTALILASSAAYAETELTVYTSIEAVDLDRYKETFEKAHPDIKINWVRDSTGVMTAKLLAEKDNPQADVVWGVAATSLLLLKSEGMLEPYSPKNVEALDPRFVDGDKPPSWVGMDAYVAALCYNTVEAGKLGLTPPTSWKDLTKPEYKGHVVMPNPNSSGTGFLDVSAWLQTFGEEEAWSFMDALHENIAAYTHSGSKPCKMAASGETVIGVSFEFPGAKAKTSGAPIDIIFPSEGSGWEAEATAIIAGTANLEAAKTLVDWSISKEANEMYNVGYAVVAYPGVAKPIENLPDDVADKMIKNDFEWAANNRARILKEWQKRYDAKSEPKS
>NC_018701.1|WP_014527144.1|649729_651187_-|phosphonoacetaldehyde-dehydrogenase
MTKAEVIIAVRHEPMRIAGRLVDTDDRVEVRYPWNDTVVGTVPAGRAEHAREAFAIAAAYQPKLTRYERQKILLATAEALAARKEEISDVITLELGISKADSLYEVGRAFDVFTLAGQMCIRDDGEIFSCDLTPHGKARKIFTMREPLTAISAITPFNHPLNMVAHKVAPAIATNNCVVVKPTELTPMTALLLADILYEAGLPPEMLSVVTGWPADIGMEMITNPHVDLVTFTGSVPVGKLIAANAHYKRQVLELGGNDPLIILNDLSDDDLARAADLAVAGATKNSGQRCTAVKRILCQESVADRFVPLVLERAKRLRFGDPMDRSTDLGTVIHEKAAALFEERVMRAAEEGADILYHPGRSGALLPPIVVDRVPHQSDLVLEETFGPIIPIVRVPDDDDATITLSNSTAFGLSSGVCTNDYRRMQKYIAGLKVGTVNIWEVPGYRIEMSPFGGIKDSGNGYKEGVIEAMKSFTNVKTFSLPWP
>NC_018701.1|WP_010975822.1|651183_652458_-|phosphonoacetate-hydrolase
MNQMSKISVTVNGRRYPWPRVPAIAVCLDGCEPAYLDAAIDAGLMPALKRIKERGAVRLAHSVIPSFTNPNNLSIATGSPPAVHGICGNYLYEPSTGEEVMMNDPKFLRAPTIFQAFYDAGARVAVVTAKDKLRALLGKGLRFDEGRAVCFSSEKSDKATRAEHGIDNASAWLGRPVPEVYSAALSEFVFAAGVKLLREFRPDIMYLTTTDYVQHKYAPGVPEANSFYEMFDRYLAELDGLGAAIVVTADHGMKPKHKADGSPDVIYVQDLLDEWLGKDAARVILPITDPYVVHHGALGSFATAYLPDGCDRSEIMARLKAIQGVDVVLGREEACRRFELPEDRIGDIVLVSSENKTLGTSEHRHDLAALDEPLRSHGGLTEQEVPFIVNRVLPELPNAPRLRNFDAFFYAVTAAAEAGAEGGL
>NC_018701.1|WP_014527145.1|652485_653682_-|2-aminoethylphosphonate--pyruvate-transaminase
MPADAKTNDVLEAPRLGEPYLLTPGPLTTAFSVKEAMLRDWGSWDGDFRGMTAELRRELLAIAGDESGQYDCVPMQGSGSFSVEAMLGSFIPRDGKVLVLMNGAYGQRIAQTLKYLGRAHVSIDKGDYMPPRGSEVAAALDADPAITHVVVVHCETSSGILNPLKEISEAVYSRGRKLLVDSMSAFGAVPAGVGDFRYEAIVSSANKCIEGVPGFGFVIARKSELEAAKDRSHSLSLDVHAQWAYMNKTGQWRFTPPTHVVAAFLEALRLHRKEGGVAGRGARYANNRDVMVAGMRQLGFETLLGDEWLSPIIVTFFSPAHPNFKFERFYELMKARGFIIYPGKLTVVDSFRIGCIGQMDSHVMQKVVAAAAESLAKMRVDTATPPALALAERARLAA

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Crispr_ID: NC_018701_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018701_2

634310-634409

Orphan

Consensus_repeat	Method
TGCCGCCCGCACCGCCGCTGCCGCCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018701_2

>merge|NC_018701|2|634310-634409|CRISPRCasFinder
TGCCGCCCGCACCGCCGCTGCCGCCGAAGCCGCCGCCGACGGTGATCCTGCCCGCCGCCTCGTCGGAACCGTCGCCGCCCTGCCCGCCACCGCCGCCGAT

>NC_018701|2|2|634310-634409|CRISPRCasFinder
TGCCGCCCGCACCGCCGCTGCCGCCGA	AGCCGCCGCCGACGGTGATCCTGCCCGCCGCCTCGTCGGAACCGT
CGCCGCCCTGCCCGCCACCGCCGCCGAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_018701.1\|WP_017266907.1\|627659_628169_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379237
NC_018701.1\|WP_015008254.1\|624633_626415_-\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|179625
NC_018701.1\|WP_010975822.1\|651183_652458_-\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|131388
NC_018701.1\|WP_015008259.1\|638826_639978_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NC_018701.1\|WP_013850618.1\|629282_630497_-\|YeeE/YedE-family-protein	unknown	unknown	gnl\|CDD\|377230
NC_018701.1\|WP_014527144.1\|649729_651187_-\|phosphonoacetaldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|132294
NC_018701.1\|WP_010975842.1\|620733_621357_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991
NC_018701.1\|WP_015008263.1\|644882_646925_-\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274495
NC_018701.1\|WP_015008255.1\|626911_627505_+\|hypothetical-protein	unknown	unknown	unknown
NC_018701.1\|WP_014527145.1\|652485_653682_-\|2-aminoethylphosphonate--pyruvate-transaminase	unknown	unknown	gnl\|CDD\|184076
NC_018701.1\|WP_010975843.1\|619643_620534_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NC_018701.1\|WP_010975841.1\|621353_622331_+\|xanthine-dehydrogenase-family-protein-subunit-M	unknown	unknown	gnl\|CDD\|224238
NC_018701.1\|WP_010975825.1\|648183_649206_-\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274494
NC_018701.1\|WP_015008253.1\|622327_624553_+\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	unknown	unknown	gnl\|CDD\|224446
NC_018701.1\|WP_013850619.1\|630603_631515_-\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NC_018701.1\|WP_015008257.1\|628331_628919_-\|hypothetical-protein	unknown	unknown	unknown
NC_018701.1\|WP_015008261.1\|640835_641234_-\|hypothetical-protein	unknown	unknown	unknown
NC_018701.1\|WP_015008260.1\|639965_640748_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NC_018701.1\|WP_015008262.1\|641359_644698_-\|pre-peptidase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|225483
NC_018701.1\|WP_014527142.1\|646930_648094_-\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274496

Protein	Function_ID	Function_description	E-value
NC_018701.1\|WP_017266907.1\|627659_628169_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379237	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.94853e-16
NC_018701.1\|WP_015008254.1\|624633_626415_-\|cation:proton-antiporter	gnl\|CDD\|179625	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional.	4.67675e-171
NC_018701.1\|WP_010975822.1\|651183_652458_-\|phosphonoacetate-hydrolase	gnl\|CDD\|131388	TIGR02335, phosphonoacetate_hydrolase, phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.	1.66756e-171
NC_018701.1\|WP_015008259.1\|638826_639978_+\|histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	2.79311e-171
NC_018701.1\|WP_013850618.1\|629282_630497_-\|YeeE/YedE-family-protein	gnl\|CDD\|377230	pfam04143, Sulf_transp, Sulphur transport. This is an integral membrane protein. It is predicted to have a function in the transport of sulphur-containing molecules. It contains several conserved glycines and an invariant cysteine that is probably an important functional residue.	3.00966e-65
NC_018701.1\|WP_014527144.1\|649729_651187_-\|phosphonoacetaldehyde-dehydrogenase	gnl\|CDD\|132294	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase. This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.	0
NC_018701.1\|WP_010975842.1\|620733_621357_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	1.51434e-78
NC_018701.1\|WP_015008263.1\|644882_646925_-\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	gnl\|CDD\|274495	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein. [Transport and binding proteins, Amino acids, peptides and amines].	0
NC_018701.1\|WP_014527145.1\|652485_653682_-\|2-aminoethylphosphonate--pyruvate-transaminase	gnl\|CDD\|184076	PRK13479, PRK13479, 2-aminoethylphosphonate--pyruvate transaminase; Provisional.	0
NC_018701.1\|WP_010975843.1\|619643_620534_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.94942e-30
NC_018701.1\|WP_010975841.1\|621353_622331_+\|xanthine-dehydrogenase-family-protein-subunit-M	gnl\|CDD\|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	1.14193e-90
NC_018701.1\|WP_015008253.1\|622327_624553_+\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	gnl\|CDD\|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	0
NC_018701.1\|WP_013850619.1\|630603_631515_-\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	8.12689e-90
NC_018701.1\|WP_010975825.1\|648183_649206_-\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274494	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein. This ABC transporter extracellular solute-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NC_018701.1\|WP_015008260.1\|639965_640748_+\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	9.4449e-67
NC_018701.1\|WP_015008262.1\|641359_644698_-\|pre-peptidase-C-terminal-domain-containing-protein	gnl\|CDD\|225483	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.09264e-24
NC_018701.1\|WP_014527142.1\|646930_648094_-\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274496	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0

>NC_018701.1|WP_013850619.1|630603_631515_-|sulfurtransferase
MRIASLAFTLSVLASSALAADISPLVDAEWVKANAGDKDVVILDIRDKVAETELGDKPYIQGAVVAPYASAGWRTEVGGVPGMLPPLEQITKLIGDLGIDNDDHVVIVPWGTDSTEFGGATRVYWTFKYLGHEEVSILDGGWRQYDAAGGTRSAEAVKPEPATFHAEPQEKLLATTEEVAAALKAGVKLIDGRPAEQHQGKSKSPVVRANGTIPGSINIEHSKLYSQDHALFARPETVKALTEAAGLAAEEENITFCNTGHWASVTWFALSEVLGNKNTTMYDGSMAEWTADPARPVENKSGT
>NC_018701.1|WP_013850618.1|629282_630497_-|YeeE/YedE-family-protein
MTDISFDRSRYLPSAVVDRGPALVAGGALLIGLLVIAQLIDLRQAALFVVGGLLGVALYHGSFGFTGGWRRMVVERRGRGIRAQMLMIGVAALAMIPLISAGSLGGQPLVGALAPVGVSVLVGAAMFGLGMQLGGGCGSGTLFTVGGGSARMLVTLTFFIVGALIGSAHLPWWLTLPSFGTIDLGRQLGTGTAILATLAGLGLVALATALIERRAHGNIEREPEPSRPGWTWLLYGPWPLVGAGLLMALLNVATLLLAGHPWSVTFGFGLWGAKAAQAVGVPVATWEFWNWPGPQAALSASVLADVTSVMNFGIVLGAAAAASLAGKFAPKAKIPLGSMLAAVVGGLLMGYGARLSFGCNIGALFSGIASGSLHGWLWFATAFVGSFVGIWMRPLFGLDGFKKK
>NC_018701.1|WP_015008257.1|628331_628919_-|hypothetical-protein
MAEEAVELARREIAYCETLLAKGGLNVLSETFRDTAEIKAWDHYPTGDVFDPTSGAQWFYHCHPAEEGAEEHGHFHCFLRPQGPQGPIHHLAAVGVDAHGRLLRLFTVNQWVVGDDWLGAEGTIALLPRFDVQMPRPSYLVNRWLTAIFTAYEQQITELIRERDRTLLAHRQPESVEARQDRALEVTSEFKLSGR
>NC_018701.1|WP_017266907.1|627659_628169_-|GNAT-family-N-acetyltransferase
MIEFRSLTEADFLMLCEWLNSPHMRAHYQKTPITIEEVQGKYSERLSPSHPTHCHIARYNGEPFGMLQCYSLRNYPDFASEIGEQDGVAVDLFIGEERFIGKGFGKAMLRSYVLNVVPSIFPQDCKCFICHAKENKIAIRGSLSAGFLPYRDVIERGVESLLLSFDRPI
>NC_018701.1|WP_015008255.1|626911_627505_+|hypothetical-protein
MLWNIQLVLFLSKAFDHLIDATMIIDHADGRRFSFDGAPTLYTLKPGIKKDPVRRWALPDRVFFGNGACAILAGVFLSEAPLPGFYAERIIPGEGFAGNHIFVTDGVIAFDHHGYSLRSRLLTYHTNGWAGRSPEGWNCRLERVTFDLLDRRDLNDNQMLGREQYLHDPIVRAKTYLGRVNHAEASARARAKNGAAI
>NC_018701.1|WP_015008254.1|624633_626415_-|cation:proton-antiporter
MAAESHGIDLLPVIALLGAAVVAAPLFKRIGLGSVLGYLAAGIAIGPFGLRLLQEPSSILHVAELGVVMFLFIIGLEMRPSRLWGLRREIFGLGIVQVALCALLLTGVGVLTGFPVAPSFVAGAGFVLTSTAIVMQLLEERREMAAPKGQRIVSILLVEDMAIVPLLALVAFLAPIVPGSVAASGAIDWLSIAIGLVTIAGLVLAGRYLLNPLFGLIASVEAREVMTAAALMVVLGSAYVMQLGGLSMAMGAFLAGVLLSESTFRHQLEADVEPFRGILLGLFFLAVGMSLDLGVIARNWAMILFYVAAYMVVKAIVIYLVARLFGASNWEAIERAVFMAQGGEFAFVLYAAALGTGIISGEENAILTAIIIVSMMVTPLLIAALRLVERNIPLSTDGVERPENLSGNVLIIGFGRVGQIVSQVLLTRGHVISIIDTDVEMINTAREFDFKVYYGDGKRLDILHAAGAERASAIVVCVDKADDATKIVELIKAEFPLIPVLARASDRRHALDLITAGADFHIRETFESSLVLGQKALEALGADLPEVAEIIEKVRQRDEKRLELELVGGLYAGRPLFSGKLEPVEAVPPGGSA
>NC_018701.1|WP_015008253.1|622327_624553_+|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit
MTTAIGKSLSRIDGRLKVTGQATYAAEFNQEGQAHAVIVGSTVGLGRIESIDSAAVEKMPGVVAVISHLNAQRLAYNEHRGPIDPPAGERLHVLQGSEVRFFGEPVAIVVAETLDQAEHAANALKVTYSARQPQVDAHAGERVIPAVARRPGARAEADVARGDADKALETAAVKVEAEYVIARENHNPMEPHATIAAWNGDRLTLWSKSQFVVNEQAEIAAIFGLPPENVQVICPFIGGAFGTSLRTWPHVTLAALAARHVNRPVKLVLTRKQMFFATGHRPYTLQRIALGAQPDGKLIGIVHEGAGETSRYEEFMEALTSVTSFMYSCPNVRTSYRLIPLDASTPTYMRGPGEASGIHALECAVDELAYKLQMDPIDLRRINEPQIDEGRQVPFSSRSMLKCYDLGAERFGWSRRTPEPGSMRDGRLLIGYGMANASYPCLFAPASARVRLLPDGTVEVEAAASDMGPGTYTSMSQVAAEYLGIPVERIRFSLGRSDFPATPPHGGSMTMASVGSAIRAACLDLQAKAAVLAAKGGGNAGLAGQSPEALEWRDGMLFVKGRSDRGVTYADLVSYGGESPLVGEGTAARDAETGQKYSMHSFGAVFAEVAIDPDVKTIKVRRALGAYGVGRVVNPKLATSQCIGGMIGGIGMAIMERTLLDRRNGRPINAHMADYLVPVNLDTPHIEAHFIDEEDTIVNPLGVKGLGEIALVGMSAAVSNAIHHATGRRVHELPIMIESLL
>NC_018701.1|WP_010975841.1|621353_622331_+|xanthine-dehydrogenase-family-protein-subunit-M
MRPFEFQRAASESEAIAAGAAGARYLAGGTTLVDLMREEVETPEKIVDINRLPLNYIRATDEAIVIGALARMSEVAANQDVRRLQPLIPETLTEGASPQLRNVASIGGNLLQRVRCPYFRMLDAPCNKRVPGSGCSAIDGLNAGHAILGTSEHCVATHPSDLAVSLVALGAMLSLKGPRGERTIPVEELFRLPESTPHLEHTLEPGELIVEVHIPNGPYARKARYLKVRDRSSYEFALVSAAAALHVENGIIKEVRIAAGGVGTRPWRMNAVEQALVGKPAARASYEIAAAVSTEETRPLSHNGFKVKLLPATIVRALEMAGDVA
>NC_018701.1|WP_010975842.1|620733_621357_+|(2Fe-2S)-binding-protein
MTDETAELHPPGLTMSRREALQATAGAVAFAALPLPAEAAADSTATPAPPTHTLPLEVTVNGRVHQLVVDPRLSVLDMLRERLSLTGTKKGCNQGACGACTVLIDGQRVNACLALAVMYDGAKITTIEGVAEGEALHPLQVAFIEHDAFQCGYCTSGQIMSGLGCISEGHASSAEEISYWMSGNICRCGAYPGIVAAVAQAAKEDRT
>NC_018701.1|WP_010975843.1|619643_620534_+|helix-turn-helix-transcriptional-regulator
MGGKALADTTAHIRRLQRGLSPPLVAEVFSDDTRLVGRWWNKPFEYELPPLKDHVLSAKYSGQGMASVKIGGQTISAPAAMGTITLAPRGHGGFWRADGHVEVSNIFLGHKRLLASADQVGNGREPELLDRVNFSDPKLFTIMALINDEINSGDAISHLYIDQLLDLVCLQLLRAHSASSMPISPGPQRGLSGWQVKRVTGYMRENMAEDIRIQELADLVNLSRFHFCTAFRMATGQTPYGWLTRQRIAYAKTLLRDMKLRVNDIALAVGYETQSAFAASFRKAVGITPTEFRRRL
>NC_018701.1|WP_015008259.1|638826_639978_+|histidine-kinase
MVVIAEPDLLPDLSGSHIADPSYRRSRTKRKFNGSGTVLVGALGSFWRAQTAGWLFGALFAVVSRILAFEDVAFAFALTAVLEPLGFALTTLAYRIFRHRIGGVTLTVVAVALALSIAGGVLQMLIANAMKDVLQPNIDPDYGANGSVIPAIYYTLIFLGWSLAYLWIKADADARKQRMRRHRAREEALRAELHQLRLQLDSHFLFNVLNTVAMEIPEEPDTALEMIHRITAYLRYLLENQTRRICPLSDEIEAMMAYIRIQELRFEGRLDCVVEVDPAARPVAVPHLILQPLVENAVKHGLRSPASRFAVGITVECRDADLFIEISNPGRLEAGERDRPPIGLANIRRRLELHYPLGHALTLIQAGDKVIARLMLRGVACFA
>NC_018701.1|WP_015008260.1|639965_640748_+|response-regulator-transcription-factor
MLRVMVVDDEPPARRGLKRLMQAHPDVEVVGEAGSLDQAHQLTHALRPDAIFLDIDLGDDDGFGLIKRLDQVPAIVFVTGHGTYAPQAFDVAALDFLLKPVERQRLALTLERLRRYRHALELGEKVLGDTTTVPPVAMPGRRRLHIRMAGQTLVLPTDGIAMLAAEADFTRIVMADARDHLVCRLLGQFDAELPTPPFFRVSRSLIINLDRVVRVRSQDKGRSLLSLGRSLTPIMLGRVATTRLRRALDGFQRVGTVPDG
>NC_018701.1|WP_015008261.1|640835_641234_-|hypothetical-protein
MKRPTDRRTVLMTAGAAAVAAVAGPVAAQSPDIRGAVTFEGGAVPEGHLEIYLEDPAIQDEARRRATETRIKSDGTSTSIAFSLSPPASVNASPTLRIVARLERADGWLVARGSTRFEAGSPVYVTLNPVMY
>NC_018701.1|WP_015008262.1|641359_644698_-|pre-peptidase-C-terminal-domain-containing-protein
MPNPSQTSDNWWINDQTPDNPYGKSEDYESFLDYLGALPRSLTPEMAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVDDTPFDSTTDWMEVVSPELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVGETSRWSASTPLMADIEAVIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGVDTIDFSGSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDILIGNDGANTLDGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANVENIIYADESTTQPGGGGASPPIAGDNTMTSIIFGGNGNDTLDGGAGDDTIFGKGGDDLIIGGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDVLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFHSIENLIGSDDRIDRFIGTSAANHFWGQGGGDYFNGGGGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYAGSPDGVTIDLANGTASGGDGDGPVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDTLTGGGGADRLNGGAGSDTADYADATSGLRLGLAGGRSGGDTYVSIENLAGSGFGDRLTGNGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAPPRPGMGSGYATLGPDAANNSIAAAFDISNNFSLTSDPDIFDSTTILHTTVNATGNGQGGYYKIDLAAGTVITIDIDGIADPNVHDSWVRLLDSAGNIVAQNDDGGGDPGSTSNRDSSLVFVAQETGTYYILEGSWSPTAPGDGWAEAVPAGSTYELNVSVEFPPQPAQPGVAGSDTLIGGGGSDLLDGGLAADTLTGGAGEDTFRFSTALGNGNVDWIKDFNVIDDTILLDNLIFESVGGEGALALGAFYGSAGGVAHDADDRIIYDADSGVLSYDADGAGEIAAIQYAQLSTNLKLSAADFIII
>NC_018701.1|WP_015008263.1|644882_646925_-|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit
MTLAVDFLPPGRAVRQQISGDDWLKRAVMLVVGIYLVVALALPLFVMLSKSFSTYTFDLHQFEFQVSDQSGQGWSDPVTAAALNAAVAAFPESDLKASADGRLQAAKLFPDFSFRSPVRYRIRGTSDETHFLAGSQLVRGTAWEEYDSNNFRRVMLRPSRSIGLSNFAEYFSTPSLVRSIKNSVTMALISTAVTLVVAFGLAYALNRSRMPGKGLFKLIVTIPILVPSLLPGIALVYLFGNQGVFRDLLLGHSIYGPLGIVVGSVFFTLPHAFLIISTALSVADARHYEAATSLRASKWRTFWTVTVPGARYGLISAAFVVFTLVITDFGLPKVIGGQYGMLAVDIYKQVIGQQNFEMGAVVSVILLVPAFLAFAVDRLTQRRQVALLSARAVPYEPKPRRGFDAACFAFCTLVAVFVLGMIGMCQVAALVKFWPYDLSLSLRNYAFDLMDGGGWDSYYNSIRLALMTAVIGSLIVFTGAYMVEKTKGFGLGRATFHMLAMLPMAVPGMVLGLAYIFFFNSAANPLHGIYGTMTILVLCTVTHFYTVAHLTALTALKQLDPEFEAVACSLKIPFYKLFFRVTLPVCLPAVLEIAIYLFVNAMTTVSAVVFLYATDTKLASVAILNMDDAGDIAPAAAMGMMIFYTNVAAKLLHAFVSRLLLARTQGWRRVSQSAAATVPH
>NC_018701.1|WP_014527142.1|646930_648094_-|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein
MKHATAPAEPAMPASATRQIEGRPFLEIDGLWKAYGDFVALRDIDLQVKEGEFICFLGPSGCGKTTLLRAIAGLDIQSRGTICQGGQDISRLPPAQRDYGIVFQSYALFPNLTIEKNIAFGLENIGRPRREIASRVSELLELVGLSSQGRKYPAQLSGGQQQRVALARAMAISPGLLLLDEPLSALDAKVRVHLRHEIKELQRKLGVTTIMVTHDQEEALAMADRIVVMNQGGIEQVGTPTEIYRHPKTLFVADFIGETNQFPATVGKGAQVEIGHTRFACAEHRLPSGASVVAAVRPADIIPHGAAAHRATGLDAVGNADNLIDAHVEDMEFLGMFWRTRLSAPRLKEKALVADFSTNAVRRLSIEIGSAIQVEIPQERLLLFAKA
>NC_018701.1|WP_010975825.1|648183_649206_-|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein
MPFSKIFLGAGTALILASSAAYAETELTVYTSIEAVDLDRYKETFEKAHPDIKINWVRDSTGVMTAKLLAEKDNPQADVVWGVAATSLLLLKSEGMLEPYSPKNVEALDPRFVDGDKPPSWVGMDAYVAALCYNTVEAGKLGLTPPTSWKDLTKPEYKGHVVMPNPNSSGTGFLDVSAWLQTFGEEEAWSFMDALHENIAAYTHSGSKPCKMAASGETVIGVSFEFPGAKAKTSGAPIDIIFPSEGSGWEAEATAIIAGTANLEAAKTLVDWSISKEANEMYNVGYAVVAYPGVAKPIENLPDDVADKMIKNDFEWAANNRARILKEWQKRYDAKSEPKS
>NC_018701.1|WP_014527144.1|649729_651187_-|phosphonoacetaldehyde-dehydrogenase
MTKAEVIIAVRHEPMRIAGRLVDTDDRVEVRYPWNDTVVGTVPAGRAEHAREAFAIAAAYQPKLTRYERQKILLATAEALAARKEEISDVITLELGISKADSLYEVGRAFDVFTLAGQMCIRDDGEIFSCDLTPHGKARKIFTMREPLTAISAITPFNHPLNMVAHKVAPAIATNNCVVVKPTELTPMTALLLADILYEAGLPPEMLSVVTGWPADIGMEMITNPHVDLVTFTGSVPVGKLIAANAHYKRQVLELGGNDPLIILNDLSDDDLARAADLAVAGATKNSGQRCTAVKRILCQESVADRFVPLVLERAKRLRFGDPMDRSTDLGTVIHEKAAALFEERVMRAAEEGADILYHPGRSGALLPPIVVDRVPHQSDLVLEETFGPIIPIVRVPDDDDATITLSNSTAFGLSSGVCTNDYRRMQKYIAGLKVGTVNIWEVPGYRIEMSPFGGIKDSGNGYKEGVIEAMKSFTNVKTFSLPWP
>NC_018701.1|WP_010975822.1|651183_652458_-|phosphonoacetate-hydrolase
MNQMSKISVTVNGRRYPWPRVPAIAVCLDGCEPAYLDAAIDAGLMPALKRIKERGAVRLAHSVIPSFTNPNNLSIATGSPPAVHGICGNYLYEPSTGEEVMMNDPKFLRAPTIFQAFYDAGARVAVVTAKDKLRALLGKGLRFDEGRAVCFSSEKSDKATRAEHGIDNASAWLGRPVPEVYSAALSEFVFAAGVKLLREFRPDIMYLTTTDYVQHKYAPGVPEANSFYEMFDRYLAELDGLGAAIVVTADHGMKPKHKADGSPDVIYVQDLLDEWLGKDAARVILPITDPYVVHHGALGSFATAYLPDGCDRSEIMARLKAIQGVDVVLGREEACRRFELPEDRIGDIVLVSSENKTLGTSEHRHDLAALDEPLRSHGGLTEQEVPFIVNRVLPELPNAPRLRNFDAFFYAVTAAAEAGAEGGL
>NC_018701.1|WP_014527145.1|652485_653682_-|2-aminoethylphosphonate--pyruvate-transaminase
MPADAKTNDVLEAPRLGEPYLLTPGPLTTAFSVKEAMLRDWGSWDGDFRGMTAELRRELLAIAGDESGQYDCVPMQGSGSFSVEAMLGSFIPRDGKVLVLMNGAYGQRIAQTLKYLGRAHVSIDKGDYMPPRGSEVAAALDADPAITHVVVVHCETSSGILNPLKEISEAVYSRGRKLLVDSMSAFGAVPAGVGDFRYEAIVSSANKCIEGVPGFGFVIARKSELEAAKDRSHSLSLDVHAQWAYMNKTGQWRFTPPTHVVAAFLEALRLHRKEGGVAGRGARYANNRDVMVAGMRQLGFETLLGDEWLSPIIVTFFSPAHPNFKFERFYELMKARGFIIYPGKLTVVDSFRIGCIGQMDSHVMQKVVAAAAESLAKMRVDTATPPALALAERARLAA

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Crispr_ID: NC_018701_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018701_3

634484-634603

Orphan

Consensus_repeat	Method
TGCCGCCCGCACCGCCGCTGCCGCCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018701_3

>merge|NC_018701|3|634484-634603|CRISPRCasFinder
TGCCGACCGCGCCGCCATTGCCGCCCGCACCGCCGCTGCCGCCGACACCGACGGTGATGTTGGCCGTCGCCTGGCTGCCGGACGCGGTGGAGGTGCCGCCCGCACCGCCGCCGCCGCCGA

>NC_018701|3|3|634484-634603|CRISPRCasFinder
TGCCGACCGCGCCGCCATTGCCGCCCG	CACCGCCGCTGCCGCCGACACCGACGGTGATGTTGGCCGTCGCCTGGCTGCCGGACGCGGTGGAGG
TGCCGCCCGCACCGCCGCCGCCGCCGA

Protein	Signature genes	Signature genes Name	Protein_function
NC_018701.1\|WP_017266907.1\|627659_628169_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379237
NC_018701.1\|WP_015008254.1\|624633_626415_-\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|179625
NC_018701.1\|WP_010975822.1\|651183_652458_-\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|131388
NC_018701.1\|WP_015008259.1\|638826_639978_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NC_018701.1\|WP_013850618.1\|629282_630497_-\|YeeE/YedE-family-protein	unknown	unknown	gnl\|CDD\|377230
NC_018701.1\|WP_014527144.1\|649729_651187_-\|phosphonoacetaldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|132294
NC_018701.1\|WP_010975842.1\|620733_621357_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991
NC_018701.1\|WP_015008263.1\|644882_646925_-\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274495
NC_018701.1\|WP_015008255.1\|626911_627505_+\|hypothetical-protein	unknown	unknown	unknown
NC_018701.1\|WP_014527145.1\|652485_653682_-\|2-aminoethylphosphonate--pyruvate-transaminase	unknown	unknown	gnl\|CDD\|184076
NC_018701.1\|WP_010975843.1\|619643_620534_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NC_018701.1\|WP_010975841.1\|621353_622331_+\|xanthine-dehydrogenase-family-protein-subunit-M	unknown	unknown	gnl\|CDD\|224238
NC_018701.1\|WP_010975825.1\|648183_649206_-\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274494
NC_018701.1\|WP_015008253.1\|622327_624553_+\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	unknown	unknown	gnl\|CDD\|224446
NC_018701.1\|WP_013850619.1\|630603_631515_-\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NC_018701.1\|WP_015008257.1\|628331_628919_-\|hypothetical-protein	unknown	unknown	unknown
NC_018701.1\|WP_015008261.1\|640835_641234_-\|hypothetical-protein	unknown	unknown	unknown
NC_018701.1\|WP_015008260.1\|639965_640748_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NC_018701.1\|WP_015008262.1\|641359_644698_-\|pre-peptidase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|225483
NC_018701.1\|WP_014527142.1\|646930_648094_-\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274496

Protein	Function_ID	Function_description	E-value
NC_018701.1\|WP_017266907.1\|627659_628169_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379237	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.94853e-16
NC_018701.1\|WP_015008254.1\|624633_626415_-\|cation:proton-antiporter	gnl\|CDD\|179625	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional.	4.67675e-171
NC_018701.1\|WP_010975822.1\|651183_652458_-\|phosphonoacetate-hydrolase	gnl\|CDD\|131388	TIGR02335, phosphonoacetate_hydrolase, phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.	1.66756e-171
NC_018701.1\|WP_015008259.1\|638826_639978_+\|histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	2.79311e-171
NC_018701.1\|WP_013850618.1\|629282_630497_-\|YeeE/YedE-family-protein	gnl\|CDD\|377230	pfam04143, Sulf_transp, Sulphur transport. This is an integral membrane protein. It is predicted to have a function in the transport of sulphur-containing molecules. It contains several conserved glycines and an invariant cysteine that is probably an important functional residue.	3.00966e-65
NC_018701.1\|WP_014527144.1\|649729_651187_-\|phosphonoacetaldehyde-dehydrogenase	gnl\|CDD\|132294	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase. This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.	0
NC_018701.1\|WP_010975842.1\|620733_621357_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	1.51434e-78
NC_018701.1\|WP_015008263.1\|644882_646925_-\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	gnl\|CDD\|274495	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein. [Transport and binding proteins, Amino acids, peptides and amines].	0
NC_018701.1\|WP_014527145.1\|652485_653682_-\|2-aminoethylphosphonate--pyruvate-transaminase	gnl\|CDD\|184076	PRK13479, PRK13479, 2-aminoethylphosphonate--pyruvate transaminase; Provisional.	0
NC_018701.1\|WP_010975843.1\|619643_620534_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.94942e-30
NC_018701.1\|WP_010975841.1\|621353_622331_+\|xanthine-dehydrogenase-family-protein-subunit-M	gnl\|CDD\|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	1.14193e-90
NC_018701.1\|WP_015008253.1\|622327_624553_+\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	gnl\|CDD\|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	0
NC_018701.1\|WP_013850619.1\|630603_631515_-\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	8.12689e-90
NC_018701.1\|WP_010975825.1\|648183_649206_-\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274494	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein. This ABC transporter extracellular solute-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NC_018701.1\|WP_015008260.1\|639965_640748_+\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	9.4449e-67
NC_018701.1\|WP_015008262.1\|641359_644698_-\|pre-peptidase-C-terminal-domain-containing-protein	gnl\|CDD\|225483	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.09264e-24
NC_018701.1\|WP_014527142.1\|646930_648094_-\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274496	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0

>NC_018701.1|WP_013850619.1|630603_631515_-|sulfurtransferase
MRIASLAFTLSVLASSALAADISPLVDAEWVKANAGDKDVVILDIRDKVAETELGDKPYIQGAVVAPYASAGWRTEVGGVPGMLPPLEQITKLIGDLGIDNDDHVVIVPWGTDSTEFGGATRVYWTFKYLGHEEVSILDGGWRQYDAAGGTRSAEAVKPEPATFHAEPQEKLLATTEEVAAALKAGVKLIDGRPAEQHQGKSKSPVVRANGTIPGSINIEHSKLYSQDHALFARPETVKALTEAAGLAAEEENITFCNTGHWASVTWFALSEVLGNKNTTMYDGSMAEWTADPARPVENKSGT
>NC_018701.1|WP_013850618.1|629282_630497_-|YeeE/YedE-family-protein
MTDISFDRSRYLPSAVVDRGPALVAGGALLIGLLVIAQLIDLRQAALFVVGGLLGVALYHGSFGFTGGWRRMVVERRGRGIRAQMLMIGVAALAMIPLISAGSLGGQPLVGALAPVGVSVLVGAAMFGLGMQLGGGCGSGTLFTVGGGSARMLVTLTFFIVGALIGSAHLPWWLTLPSFGTIDLGRQLGTGTAILATLAGLGLVALATALIERRAHGNIEREPEPSRPGWTWLLYGPWPLVGAGLLMALLNVATLLLAGHPWSVTFGFGLWGAKAAQAVGVPVATWEFWNWPGPQAALSASVLADVTSVMNFGIVLGAAAAASLAGKFAPKAKIPLGSMLAAVVGGLLMGYGARLSFGCNIGALFSGIASGSLHGWLWFATAFVGSFVGIWMRPLFGLDGFKKK
>NC_018701.1|WP_015008257.1|628331_628919_-|hypothetical-protein
MAEEAVELARREIAYCETLLAKGGLNVLSETFRDTAEIKAWDHYPTGDVFDPTSGAQWFYHCHPAEEGAEEHGHFHCFLRPQGPQGPIHHLAAVGVDAHGRLLRLFTVNQWVVGDDWLGAEGTIALLPRFDVQMPRPSYLVNRWLTAIFTAYEQQITELIRERDRTLLAHRQPESVEARQDRALEVTSEFKLSGR
>NC_018701.1|WP_017266907.1|627659_628169_-|GNAT-family-N-acetyltransferase
MIEFRSLTEADFLMLCEWLNSPHMRAHYQKTPITIEEVQGKYSERLSPSHPTHCHIARYNGEPFGMLQCYSLRNYPDFASEIGEQDGVAVDLFIGEERFIGKGFGKAMLRSYVLNVVPSIFPQDCKCFICHAKENKIAIRGSLSAGFLPYRDVIERGVESLLLSFDRPI
>NC_018701.1|WP_015008255.1|626911_627505_+|hypothetical-protein
MLWNIQLVLFLSKAFDHLIDATMIIDHADGRRFSFDGAPTLYTLKPGIKKDPVRRWALPDRVFFGNGACAILAGVFLSEAPLPGFYAERIIPGEGFAGNHIFVTDGVIAFDHHGYSLRSRLLTYHTNGWAGRSPEGWNCRLERVTFDLLDRRDLNDNQMLGREQYLHDPIVRAKTYLGRVNHAEASARARAKNGAAI
>NC_018701.1|WP_015008254.1|624633_626415_-|cation:proton-antiporter
MAAESHGIDLLPVIALLGAAVVAAPLFKRIGLGSVLGYLAAGIAIGPFGLRLLQEPSSILHVAELGVVMFLFIIGLEMRPSRLWGLRREIFGLGIVQVALCALLLTGVGVLTGFPVAPSFVAGAGFVLTSTAIVMQLLEERREMAAPKGQRIVSILLVEDMAIVPLLALVAFLAPIVPGSVAASGAIDWLSIAIGLVTIAGLVLAGRYLLNPLFGLIASVEAREVMTAAALMVVLGSAYVMQLGGLSMAMGAFLAGVLLSESTFRHQLEADVEPFRGILLGLFFLAVGMSLDLGVIARNWAMILFYVAAYMVVKAIVIYLVARLFGASNWEAIERAVFMAQGGEFAFVLYAAALGTGIISGEENAILTAIIIVSMMVTPLLIAALRLVERNIPLSTDGVERPENLSGNVLIIGFGRVGQIVSQVLLTRGHVISIIDTDVEMINTAREFDFKVYYGDGKRLDILHAAGAERASAIVVCVDKADDATKIVELIKAEFPLIPVLARASDRRHALDLITAGADFHIRETFESSLVLGQKALEALGADLPEVAEIIEKVRQRDEKRLELELVGGLYAGRPLFSGKLEPVEAVPPGGSA
>NC_018701.1|WP_015008253.1|622327_624553_+|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit
MTTAIGKSLSRIDGRLKVTGQATYAAEFNQEGQAHAVIVGSTVGLGRIESIDSAAVEKMPGVVAVISHLNAQRLAYNEHRGPIDPPAGERLHVLQGSEVRFFGEPVAIVVAETLDQAEHAANALKVTYSARQPQVDAHAGERVIPAVARRPGARAEADVARGDADKALETAAVKVEAEYVIARENHNPMEPHATIAAWNGDRLTLWSKSQFVVNEQAEIAAIFGLPPENVQVICPFIGGAFGTSLRTWPHVTLAALAARHVNRPVKLVLTRKQMFFATGHRPYTLQRIALGAQPDGKLIGIVHEGAGETSRYEEFMEALTSVTSFMYSCPNVRTSYRLIPLDASTPTYMRGPGEASGIHALECAVDELAYKLQMDPIDLRRINEPQIDEGRQVPFSSRSMLKCYDLGAERFGWSRRTPEPGSMRDGRLLIGYGMANASYPCLFAPASARVRLLPDGTVEVEAAASDMGPGTYTSMSQVAAEYLGIPVERIRFSLGRSDFPATPPHGGSMTMASVGSAIRAACLDLQAKAAVLAAKGGGNAGLAGQSPEALEWRDGMLFVKGRSDRGVTYADLVSYGGESPLVGEGTAARDAETGQKYSMHSFGAVFAEVAIDPDVKTIKVRRALGAYGVGRVVNPKLATSQCIGGMIGGIGMAIMERTLLDRRNGRPINAHMADYLVPVNLDTPHIEAHFIDEEDTIVNPLGVKGLGEIALVGMSAAVSNAIHHATGRRVHELPIMIESLL
>NC_018701.1|WP_010975841.1|621353_622331_+|xanthine-dehydrogenase-family-protein-subunit-M
MRPFEFQRAASESEAIAAGAAGARYLAGGTTLVDLMREEVETPEKIVDINRLPLNYIRATDEAIVIGALARMSEVAANQDVRRLQPLIPETLTEGASPQLRNVASIGGNLLQRVRCPYFRMLDAPCNKRVPGSGCSAIDGLNAGHAILGTSEHCVATHPSDLAVSLVALGAMLSLKGPRGERTIPVEELFRLPESTPHLEHTLEPGELIVEVHIPNGPYARKARYLKVRDRSSYEFALVSAAAALHVENGIIKEVRIAAGGVGTRPWRMNAVEQALVGKPAARASYEIAAAVSTEETRPLSHNGFKVKLLPATIVRALEMAGDVA
>NC_018701.1|WP_010975842.1|620733_621357_+|(2Fe-2S)-binding-protein
MTDETAELHPPGLTMSRREALQATAGAVAFAALPLPAEAAADSTATPAPPTHTLPLEVTVNGRVHQLVVDPRLSVLDMLRERLSLTGTKKGCNQGACGACTVLIDGQRVNACLALAVMYDGAKITTIEGVAEGEALHPLQVAFIEHDAFQCGYCTSGQIMSGLGCISEGHASSAEEISYWMSGNICRCGAYPGIVAAVAQAAKEDRT
>NC_018701.1|WP_010975843.1|619643_620534_+|helix-turn-helix-transcriptional-regulator
MGGKALADTTAHIRRLQRGLSPPLVAEVFSDDTRLVGRWWNKPFEYELPPLKDHVLSAKYSGQGMASVKIGGQTISAPAAMGTITLAPRGHGGFWRADGHVEVSNIFLGHKRLLASADQVGNGREPELLDRVNFSDPKLFTIMALINDEINSGDAISHLYIDQLLDLVCLQLLRAHSASSMPISPGPQRGLSGWQVKRVTGYMRENMAEDIRIQELADLVNLSRFHFCTAFRMATGQTPYGWLTRQRIAYAKTLLRDMKLRVNDIALAVGYETQSAFAASFRKAVGITPTEFRRRL
>NC_018701.1|WP_015008259.1|638826_639978_+|histidine-kinase
MVVIAEPDLLPDLSGSHIADPSYRRSRTKRKFNGSGTVLVGALGSFWRAQTAGWLFGALFAVVSRILAFEDVAFAFALTAVLEPLGFALTTLAYRIFRHRIGGVTLTVVAVALALSIAGGVLQMLIANAMKDVLQPNIDPDYGANGSVIPAIYYTLIFLGWSLAYLWIKADADARKQRMRRHRAREEALRAELHQLRLQLDSHFLFNVLNTVAMEIPEEPDTALEMIHRITAYLRYLLENQTRRICPLSDEIEAMMAYIRIQELRFEGRLDCVVEVDPAARPVAVPHLILQPLVENAVKHGLRSPASRFAVGITVECRDADLFIEISNPGRLEAGERDRPPIGLANIRRRLELHYPLGHALTLIQAGDKVIARLMLRGVACFA
>NC_018701.1|WP_015008260.1|639965_640748_+|response-regulator-transcription-factor
MLRVMVVDDEPPARRGLKRLMQAHPDVEVVGEAGSLDQAHQLTHALRPDAIFLDIDLGDDDGFGLIKRLDQVPAIVFVTGHGTYAPQAFDVAALDFLLKPVERQRLALTLERLRRYRHALELGEKVLGDTTTVPPVAMPGRRRLHIRMAGQTLVLPTDGIAMLAAEADFTRIVMADARDHLVCRLLGQFDAELPTPPFFRVSRSLIINLDRVVRVRSQDKGRSLLSLGRSLTPIMLGRVATTRLRRALDGFQRVGTVPDG
>NC_018701.1|WP_015008261.1|640835_641234_-|hypothetical-protein
MKRPTDRRTVLMTAGAAAVAAVAGPVAAQSPDIRGAVTFEGGAVPEGHLEIYLEDPAIQDEARRRATETRIKSDGTSTSIAFSLSPPASVNASPTLRIVARLERADGWLVARGSTRFEAGSPVYVTLNPVMY
>NC_018701.1|WP_015008262.1|641359_644698_-|pre-peptidase-C-terminal-domain-containing-protein
MPNPSQTSDNWWINDQTPDNPYGKSEDYESFLDYLGALPRSLTPEMAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVDDTPFDSTTDWMEVVSPELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVGETSRWSASTPLMADIEAVIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGVDTIDFSGSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDILIGNDGANTLDGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANVENIIYADESTTQPGGGGASPPIAGDNTMTSIIFGGNGNDTLDGGAGDDTIFGKGGDDLIIGGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDVLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFHSIENLIGSDDRIDRFIGTSAANHFWGQGGGDYFNGGGGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYAGSPDGVTIDLANGTASGGDGDGPVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDTLTGGGGADRLNGGAGSDTADYADATSGLRLGLAGGRSGGDTYVSIENLAGSGFGDRLTGNGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAPPRPGMGSGYATLGPDAANNSIAAAFDISNNFSLTSDPDIFDSTTILHTTVNATGNGQGGYYKIDLAAGTVITIDIDGIADPNVHDSWVRLLDSAGNIVAQNDDGGGDPGSTSNRDSSLVFVAQETGTYYILEGSWSPTAPGDGWAEAVPAGSTYELNVSVEFPPQPAQPGVAGSDTLIGGGGSDLLDGGLAADTLTGGAGEDTFRFSTALGNGNVDWIKDFNVIDDTILLDNLIFESVGGEGALALGAFYGSAGGVAHDADDRIIYDADSGVLSYDADGAGEIAAIQYAQLSTNLKLSAADFIII
>NC_018701.1|WP_015008263.1|644882_646925_-|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit
MTLAVDFLPPGRAVRQQISGDDWLKRAVMLVVGIYLVVALALPLFVMLSKSFSTYTFDLHQFEFQVSDQSGQGWSDPVTAAALNAAVAAFPESDLKASADGRLQAAKLFPDFSFRSPVRYRIRGTSDETHFLAGSQLVRGTAWEEYDSNNFRRVMLRPSRSIGLSNFAEYFSTPSLVRSIKNSVTMALISTAVTLVVAFGLAYALNRSRMPGKGLFKLIVTIPILVPSLLPGIALVYLFGNQGVFRDLLLGHSIYGPLGIVVGSVFFTLPHAFLIISTALSVADARHYEAATSLRASKWRTFWTVTVPGARYGLISAAFVVFTLVITDFGLPKVIGGQYGMLAVDIYKQVIGQQNFEMGAVVSVILLVPAFLAFAVDRLTQRRQVALLSARAVPYEPKPRRGFDAACFAFCTLVAVFVLGMIGMCQVAALVKFWPYDLSLSLRNYAFDLMDGGGWDSYYNSIRLALMTAVIGSLIVFTGAYMVEKTKGFGLGRATFHMLAMLPMAVPGMVLGLAYIFFFNSAANPLHGIYGTMTILVLCTVTHFYTVAHLTALTALKQLDPEFEAVACSLKIPFYKLFFRVTLPVCLPAVLEIAIYLFVNAMTTVSAVVFLYATDTKLASVAILNMDDAGDIAPAAAMGMMIFYTNVAAKLLHAFVSRLLLARTQGWRRVSQSAAATVPH
>NC_018701.1|WP_014527142.1|646930_648094_-|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein
MKHATAPAEPAMPASATRQIEGRPFLEIDGLWKAYGDFVALRDIDLQVKEGEFICFLGPSGCGKTTLLRAIAGLDIQSRGTICQGGQDISRLPPAQRDYGIVFQSYALFPNLTIEKNIAFGLENIGRPRREIASRVSELLELVGLSSQGRKYPAQLSGGQQQRVALARAMAISPGLLLLDEPLSALDAKVRVHLRHEIKELQRKLGVTTIMVTHDQEEALAMADRIVVMNQGGIEQVGTPTEIYRHPKTLFVADFIGETNQFPATVGKGAQVEIGHTRFACAEHRLPSGASVVAAVRPADIIPHGAAAHRATGLDAVGNADNLIDAHVEDMEFLGMFWRTRLSAPRLKEKALVADFSTNAVRRLSIEIGSAIQVEIPQERLLLFAKA
>NC_018701.1|WP_010975825.1|648183_649206_-|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein
MPFSKIFLGAGTALILASSAAYAETELTVYTSIEAVDLDRYKETFEKAHPDIKINWVRDSTGVMTAKLLAEKDNPQADVVWGVAATSLLLLKSEGMLEPYSPKNVEALDPRFVDGDKPPSWVGMDAYVAALCYNTVEAGKLGLTPPTSWKDLTKPEYKGHVVMPNPNSSGTGFLDVSAWLQTFGEEEAWSFMDALHENIAAYTHSGSKPCKMAASGETVIGVSFEFPGAKAKTSGAPIDIIFPSEGSGWEAEATAIIAGTANLEAAKTLVDWSISKEANEMYNVGYAVVAYPGVAKPIENLPDDVADKMIKNDFEWAANNRARILKEWQKRYDAKSEPKS
>NC_018701.1|WP_014527144.1|649729_651187_-|phosphonoacetaldehyde-dehydrogenase
MTKAEVIIAVRHEPMRIAGRLVDTDDRVEVRYPWNDTVVGTVPAGRAEHAREAFAIAAAYQPKLTRYERQKILLATAEALAARKEEISDVITLELGISKADSLYEVGRAFDVFTLAGQMCIRDDGEIFSCDLTPHGKARKIFTMREPLTAISAITPFNHPLNMVAHKVAPAIATNNCVVVKPTELTPMTALLLADILYEAGLPPEMLSVVTGWPADIGMEMITNPHVDLVTFTGSVPVGKLIAANAHYKRQVLELGGNDPLIILNDLSDDDLARAADLAVAGATKNSGQRCTAVKRILCQESVADRFVPLVLERAKRLRFGDPMDRSTDLGTVIHEKAAALFEERVMRAAEEGADILYHPGRSGALLPPIVVDRVPHQSDLVLEETFGPIIPIVRVPDDDDATITLSNSTAFGLSSGVCTNDYRRMQKYIAGLKVGTVNIWEVPGYRIEMSPFGGIKDSGNGYKEGVIEAMKSFTNVKTFSLPWP
>NC_018701.1|WP_010975822.1|651183_652458_-|phosphonoacetate-hydrolase
MNQMSKISVTVNGRRYPWPRVPAIAVCLDGCEPAYLDAAIDAGLMPALKRIKERGAVRLAHSVIPSFTNPNNLSIATGSPPAVHGICGNYLYEPSTGEEVMMNDPKFLRAPTIFQAFYDAGARVAVVTAKDKLRALLGKGLRFDEGRAVCFSSEKSDKATRAEHGIDNASAWLGRPVPEVYSAALSEFVFAAGVKLLREFRPDIMYLTTTDYVQHKYAPGVPEANSFYEMFDRYLAELDGLGAAIVVTADHGMKPKHKADGSPDVIYVQDLLDEWLGKDAARVILPITDPYVVHHGALGSFATAYLPDGCDRSEIMARLKAIQGVDVVLGREEACRRFELPEDRIGDIVLVSSENKTLGTSEHRHDLAALDEPLRSHGGLTEQEVPFIVNRVLPELPNAPRLRNFDAFFYAVTAAAEAGAEGGL
>NC_018701.1|WP_014527145.1|652485_653682_-|2-aminoethylphosphonate--pyruvate-transaminase
MPADAKTNDVLEAPRLGEPYLLTPGPLTTAFSVKEAMLRDWGSWDGDFRGMTAELRRELLAIAGDESGQYDCVPMQGSGSFSVEAMLGSFIPRDGKVLVLMNGAYGQRIAQTLKYLGRAHVSIDKGDYMPPRGSEVAAALDADPAITHVVVVHCETSSGILNPLKEISEAVYSRGRKLLVDSMSAFGAVPAGVGDFRYEAIVSSANKCIEGVPGFGFVIARKSELEAAKDRSHSLSLDVHAQWAYMNKTGQWRFTPPTHVVAAFLEALRLHRKEGGVAGRGARYANNRDVMVAGMRQLGFETLLGDEWLSPIIVTFFSPAHPNFKFERFYELMKARGFIIYPGKLTVVDSFRIGCIGQMDSHVMQKVVAAAAESLAKMRVDTATPPALALAERARLAA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085274-1085318	0	1.0
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1151496-1151540	0	1.0
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373266-373310	0	1.0
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085279-1085323	0	1.0
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	634337-634381	0	1.0
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1302265-1302309	0	1.0
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895761-895805	0	1.0
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1423128-1423172	0	1.0
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	795069-795113	0	1.0
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1054100-1054144	1	0.978
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	656013-656057	1	0.978
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	772894-772938	1	0.978
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	292351-292395	1	0.978
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1225853-1225897	1	0.978
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	998536-998580	1	0.978
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	651469-651513	1	0.978
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	636463-636507	1	0.978
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233510-233554	1	0.978
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644528-644572	1	0.978
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558514-558558	1	0.978
NC_018701_2	2.1\|634337\|45\|NC_018701\|CRISPRCasFinder	634337-634381	45	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	658142-658186	1	0.978
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	651262-651324	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085463-1085525	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	636256-636318	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1151685-1151747	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233303-233365	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644321-644383	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	634130-634192	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1302058-1302120	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895554-895616	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	773083-773145	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558307-558369	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	292540-292602	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1422921-1422983	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373455-373517	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	794862-794924	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	657935-657997	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1226042-1226104	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	998725-998787	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085468-1085530	3	0.952
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1054289-1054351	4	0.937
NC_018701_1	1.1\|634130\|63\|NC_018701\|CRISPRCasFinder	634130-634192	63	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	656199-656261	4	0.937
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	651643-651708	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085079-1085144	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1053905-1053970	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	636637-636702	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1151301-1151366	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233684-233749	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644702-644767	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	634511-634576	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	655818-655883	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1302439-1302504	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895935-896000	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	772699-772764	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558688-558753	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	292156-292221	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1423302-1423367	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373071-373136	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	795243-795308	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	658316-658381	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1225658-1225723	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	998341-998406	6	0.909
NC_018701_3	3.1\|634511\|66\|NC_018701\|CRISPRCasFinder	634511-634576	66	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085084-1085149	6	0.909

1. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

2. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

3. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

4. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

5. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

6. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

7. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

8. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

9. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
*********************************************

10. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

11. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

12. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

13. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

14. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

15. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

16. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

17. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

18. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

19. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

20. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

21. spacer 2.1|634337|45|NC_018701|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.978

agccgccgccgacggtgatcctgcccgccgcctcgtcggaaccgt	CRISPR spacer
agccgcccccgacggtgatcctgcccgccgcctcgtcggaaccgt	Protospacer
******* *************************************

22. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

23. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

24. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

25. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

26. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

27. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

28. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

29. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

30. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

31. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

32. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

33. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

34. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

35. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

36. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

37. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

38. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

39. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

40. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.952

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	Protospacer
************************************************************

41. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 4, identity: 0.937

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtactctttttcggcggccg	Protospacer
******************************************.*****************

42. spacer 1.1|634130|63|NC_018701|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 4, identity: 0.937

caccgccgctgccgccgacgacgagatcgatcgtgtggctgtgctctttttcggcggccg	CRISPR spacer
caccgccgctgccgccgacgacgagatcgatcgtgtggctgtactctttttcggcggccg	Protospacer
******************************************.*****************

43. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

44. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

45. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

46. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

47. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

48. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

49. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

50. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

51. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

52. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

53. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

54. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

55. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

56. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

57. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

58. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

59. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

60. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

61. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

62. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

63. spacer 3.1|634511|66|NC_018701|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.909

caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	CRISPR spacer
caccgccgctgccgccgacaccgacggtgatgttggccgtcgcctggctgccggacgcgg	Protospacer
************************************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

265842 : 273794

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015008139.1\|265842_266748_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.9e-70	49.3
WP_015008140.1\|266891_267896_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	1.7e-13	26.8
WP_015008141.1\|267912_268590_+	aldolase	A0A077SK32	Escherichia_phage	2.6e-50	49.8
WP_127663358.1\|268730_269744_-\|transposase	IS110 family transposase	Q75QL1	Wolbachia_phage	5.8e-22	29.1
WP_015008142.1\|270071_270836_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_013850372.1\|270880_271864_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_010976186.1\|271865_272642_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	4.9e-05	28.2
WP_013850374.1\|272726_273794_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G3M9Y6	Bacillus_virus	4.5e-25	33.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_018683

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_018700

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NC_018701

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection