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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_018880 Bacillus thuringiensis Bt407 plasmid BTB_15p, complete sequence 0 crisprs NA 0 0 0 0
NC_018878 Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence 1 crisprs c2c4_V-U1,DEDDh,cas5,cas7,cas8a2,cas6,cas3 0 1 0 0
NC_018883 Bacillus thuringiensis Bt407 plasmid BTB_6p, complete sequence 0 crisprs NA 0 0 0 0
NC_018882 Bacillus thuringiensis Bt407 plasmid BTB_7p, complete sequence 0 crisprs NA 0 0 0 0
NC_018877 Bacillus thuringiensis Bt407, complete sequence 5 crisprs cas3,csa3,RT,WYL,c2c9_V-U4,DinG,cas14k,DEDDh 9 11 12 0
NC_018881 Bacillus thuringiensis Bt407 plasmid BTB_8p, complete sequence 0 crisprs NA 0 0 0 0
NC_018885 Bacillus thuringiensis Bt407 plasmid BTB_2p, complete sequence 0 crisprs NA 0 0 0 0
NC_018884 Bacillus thuringiensis Bt407 plasmid BTB_5p, complete sequence 0 crisprs NA 0 0 0 0
NC_018886 Bacillus thuringiensis Bt407 plasmid BTB_9p, complete sequence 0 crisprs NA 0 0 0 0
NC_018879 Bacillus thuringiensis Bt407 plasmid BTB_78p, complete sequence 0 crisprs RT,csa3 0 0 0 0

Results visualization

1. NC_018878
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018878_1 4430-4536 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_018878_1 1.1|4454|59|NC_018878|CRISPRCasFinder 4454-4512 59 NC_018878 Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence 4454-4512 0 1.0

1. spacer 1.1|4454|59|NC_018878|CRISPRCasFinder matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 0, identity: 1.0

tgaatgttattgagttacaatgaaatcaagttaggaaaacgaaaacaaactttaaaact	CRISPR spacer
tgaatgttattgagttacaatgaaatcaagttaggaaaacgaaaacaaactttaaaact	Protospacer
***********************************************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_018877
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018877_1 1117213-1117328 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018877_2 3435307-3435417 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018877_3 3683558-3683872 Orphan NA
7 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018877_4 3683954-3684502 Orphan NA
12 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018877_5 5281933-5282066 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_018877_3 3.1|3683576|27|NC_018877|CRT 3683576-3683602 27 NC_018877.1 3683423-3683449 0 1.0
NC_018877_3 3.1|3683576|27|NC_018877|CRT 3683576-3683602 27 NC_018877.1 3683531-3683557 1 0.963
NC_018877_3 3.1|3683576|27|NC_018877|CRT 3683576-3683602 27 NC_018877.1 3683378-3683404 2 0.926
NC_018877_3 3.1|3683576|27|NC_018877|CRT 3683576-3683602 27 NC_018877.1 3683459-3683485 2 0.926
NC_018877_3 3.2|3683621|18|NC_018877|CRT 3683621-3683638 18 NC_018877.1 3683504-3683521 0 1.0
NC_018877_3 3.2|3683621|18|NC_018877|CRT 3683621-3683638 18 NC_018877.1 3683540-3683557 0 1.0
NC_018877_3 3.2|3683621|18|NC_018877|CRT 3683621-3683638 18 NC_018877.1 3683387-3683404 1 0.944
NC_018877_3 3.2|3683621|18|NC_018877|CRT 3683621-3683638 18 NC_018877.1 3683432-3683449 1 0.944
NC_018877_3 3.2|3683621|18|NC_018877|CRT 3683621-3683638 18 NC_018877.1 3683468-3683485 1 0.944
NC_018877_3 3.3|3683657|27|NC_018877|CRT 3683657-3683683 27 NC_018877.1 3683423-3683449 0 1.0
NC_018877_3 3.3|3683657|27|NC_018877|CRT 3683657-3683683 27 NC_018877.1 3683531-3683557 1 0.963
NC_018877_3 3.3|3683657|27|NC_018877|CRT 3683657-3683683 27 NC_018877.1 3683378-3683404 2 0.926
NC_018877_3 3.3|3683657|27|NC_018877|CRT 3683657-3683683 27 NC_018877.1 3683459-3683485 2 0.926
NC_018877_3 3.4|3683702|18|NC_018877|CRT 3683702-3683719 18 NC_018877.1 3683504-3683521 0 1.0
NC_018877_3 3.4|3683702|18|NC_018877|CRT 3683702-3683719 18 NC_018877.1 3683540-3683557 0 1.0
NC_018877_3 3.4|3683702|18|NC_018877|CRT 3683702-3683719 18 NC_018877.1 3683387-3683404 1 0.944
NC_018877_3 3.4|3683702|18|NC_018877|CRT 3683702-3683719 18 NC_018877.1 3683432-3683449 1 0.944
NC_018877_3 3.4|3683702|18|NC_018877|CRT 3683702-3683719 18 NC_018877.1 3683468-3683485 1 0.944
NC_018877_3 3.5|3683738|18|NC_018877|CRT 3683738-3683755 18 NC_018877.1 3683423-3683440 0 1.0
NC_018877_3 3.5|3683738|18|NC_018877|CRT 3683738-3683755 18 NC_018877.1 3683531-3683548 1 0.944
NC_018877_3 3.5|3683738|18|NC_018877|CRT 3683738-3683755 18 NC_018877.1 3683864-3683881 1 0.944
NC_018877_3 3.6|3683774|27|NC_018877|CRT 3683774-3683800 27 NC_018877.1 3683495-3683521 1 0.963
NC_018877_3 3.7|3683819|36|NC_018877|CRT 3683819-3683854 36 NC_018877.1 3683864-3683899 2 0.944
NC_018877_4 4.1|3683972|18|NC_018877|CRT 3683972-3683989 18 NC_018877.1 3683504-3683521 1 0.944
NC_018877_4 4.1|3683972|18|NC_018877|CRT 3683972-3683989 18 NC_018877.1 3683540-3683557 1 0.944
NC_018877_4 4.8|3684287|18|NC_018877|CRT 3684287-3684304 18 NC_018877.1 3683882-3683899 1 0.944

1. spacer 3.1|3683576|27|NC_018877|CRT matches to position: 3683423-3683449, mismatch: 0, identity: 1.0

tgccactggacctcgaggtaacacggg	CRISPR spacer
tgccactggacctcgaggtaacacggg	Protospacer
***************************

2. spacer 3.1|3683576|27|NC_018877|CRT matches to position: 3683531-3683557, mismatch: 1, identity: 0.963

tgccactggacctcgaggtaacacggg	CRISPR spacer
tgccactggacctcaaggtaacacggg	Protospacer
**************.************

3. spacer 3.1|3683576|27|NC_018877|CRT matches to position: 3683378-3683404, mismatch: 2, identity: 0.926

tgccactggacctcgaggtaacacggg	CRISPR spacer
tgctaccggacctcgaggtaacacggg	Protospacer
***.**.********************

4. spacer 3.1|3683576|27|NC_018877|CRT matches to position: 3683459-3683485, mismatch: 2, identity: 0.926

tgccactggacctcgaggtaacacggg	CRISPR spacer
tgctaccggacctcgaggtaacacggg	Protospacer
***.**.********************

5. spacer 3.2|3683621|18|NC_018877|CRT matches to position: 3683504-3683521, mismatch: 0, identity: 1.0

acctcaaggtaacacggg	CRISPR spacer
acctcaaggtaacacggg	Protospacer
******************

6. spacer 3.2|3683621|18|NC_018877|CRT matches to position: 3683540-3683557, mismatch: 0, identity: 1.0

acctcaaggtaacacggg	CRISPR spacer
acctcaaggtaacacggg	Protospacer
******************

7. spacer 3.2|3683621|18|NC_018877|CRT matches to position: 3683387-3683404, mismatch: 1, identity: 0.944

acctcaaggtaacacggg	CRISPR spacer
acctcgaggtaacacggg	Protospacer
*****.************

8. spacer 3.2|3683621|18|NC_018877|CRT matches to position: 3683432-3683449, mismatch: 1, identity: 0.944

acctcaaggtaacacggg	CRISPR spacer
acctcgaggtaacacggg	Protospacer
*****.************

9. spacer 3.2|3683621|18|NC_018877|CRT matches to position: 3683468-3683485, mismatch: 1, identity: 0.944

acctcaaggtaacacggg	CRISPR spacer
acctcgaggtaacacggg	Protospacer
*****.************

10. spacer 3.3|3683657|27|NC_018877|CRT matches to position: 3683423-3683449, mismatch: 0, identity: 1.0

tgccactggacctcgaggtaacacggg	CRISPR spacer
tgccactggacctcgaggtaacacggg	Protospacer
***************************

11. spacer 3.3|3683657|27|NC_018877|CRT matches to position: 3683531-3683557, mismatch: 1, identity: 0.963

tgccactggacctcgaggtaacacggg	CRISPR spacer
tgccactggacctcaaggtaacacggg	Protospacer
**************.************

12. spacer 3.3|3683657|27|NC_018877|CRT matches to position: 3683378-3683404, mismatch: 2, identity: 0.926

tgccactggacctcgaggtaacacggg	CRISPR spacer
tgctaccggacctcgaggtaacacggg	Protospacer
***.**.********************

13. spacer 3.3|3683657|27|NC_018877|CRT matches to position: 3683459-3683485, mismatch: 2, identity: 0.926

tgccactggacctcgaggtaacacggg	CRISPR spacer
tgctaccggacctcgaggtaacacggg	Protospacer
***.**.********************

14. spacer 3.4|3683702|18|NC_018877|CRT matches to position: 3683504-3683521, mismatch: 0, identity: 1.0

acctcaaggtaacacggg	CRISPR spacer
acctcaaggtaacacggg	Protospacer
******************

15. spacer 3.4|3683702|18|NC_018877|CRT matches to position: 3683540-3683557, mismatch: 0, identity: 1.0

acctcaaggtaacacggg	CRISPR spacer
acctcaaggtaacacggg	Protospacer
******************

16. spacer 3.4|3683702|18|NC_018877|CRT matches to position: 3683387-3683404, mismatch: 1, identity: 0.944

acctcaaggtaacacggg	CRISPR spacer
acctcgaggtaacacggg	Protospacer
*****.************

17. spacer 3.4|3683702|18|NC_018877|CRT matches to position: 3683432-3683449, mismatch: 1, identity: 0.944

acctcaaggtaacacggg	CRISPR spacer
acctcgaggtaacacggg	Protospacer
*****.************

18. spacer 3.4|3683702|18|NC_018877|CRT matches to position: 3683468-3683485, mismatch: 1, identity: 0.944

acctcaaggtaacacggg	CRISPR spacer
acctcgaggtaacacggg	Protospacer
*****.************

19. spacer 3.5|3683738|18|NC_018877|CRT matches to position: 3683423-3683440, mismatch: 0, identity: 1.0

tgccactggacctcgagg	CRISPR spacer
tgccactggacctcgagg	Protospacer
******************

20. spacer 3.5|3683738|18|NC_018877|CRT matches to position: 3683531-3683548, mismatch: 1, identity: 0.944

tgccactggacctcgagg	CRISPR spacer
tgccactggacctcaagg	Protospacer
**************.***

21. spacer 3.5|3683738|18|NC_018877|CRT matches to position: 3683864-3683881, mismatch: 1, identity: 0.944

tgccactggacctcgagg	CRISPR spacer
tgccactggacctcaagg	Protospacer
**************.***

22. spacer 3.6|3683774|27|NC_018877|CRT matches to position: 3683495-3683521, mismatch: 1, identity: 0.963

cgctactggacctcaaggtaacacggg	CRISPR spacer
cgctaccggacctcaaggtaacacggg	Protospacer
******.********************

23. spacer 3.7|3683819|36|NC_018877|CRT matches to position: 3683864-3683899, mismatch: 2, identity: 0.944

tgccactggacctcaaggtgttcaaggtaacacagg	CRISPR spacer
tgccactggacctcaaggtgctcaaggtaacacggg	Protospacer
********************.************.**

24. spacer 4.1|3683972|18|NC_018877|CRT matches to position: 3683504-3683521, mismatch: 1, identity: 0.944

acctcaaggtaacacagg	CRISPR spacer
acctcaaggtaacacggg	Protospacer
***************.**

25. spacer 4.1|3683972|18|NC_018877|CRT matches to position: 3683540-3683557, mismatch: 1, identity: 0.944

acctcaaggtaacacagg	CRISPR spacer
acctcaaggtaacacggg	Protospacer
***************.**

26. spacer 4.8|3684287|18|NC_018877|CRT matches to position: 3683882-3683899, mismatch: 1, identity: 0.944

tgttcaaggtaacacggg	CRISPR spacer
tgctcaaggtaacacggg	Protospacer
**.***************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_018877_4 4.9|3684323|27|NC_018877|CRT 3684323-3684349 27 JQ691611 Cronobacter phage CR9, complete genome 9702-9728 2 0.926
NC_018877_3 3.6|3683774|27|NC_018877|CRT 3683774-3683800 27 MT380195 Klebsiella phage KP_LZD_B01, complete genome 78585-78611 3 0.889
NC_018877_3 3.6|3683774|27|NC_018877|CRT 3683774-3683800 27 KX845404 Klebsiella phage vB_Kpn_IME260, complete genome 83090-83116 3 0.889
NC_018877_4 4.6|3684197|27|NC_018877|CRT 3684197-3684223 27 JQ691611 Cronobacter phage CR9, complete genome 9702-9728 3 0.889
NC_018877_3 3.6|3683774|27|NC_018877|CRT 3683774-3683800 27 JQ691611 Cronobacter phage CR9, complete genome 9693-9719 4 0.852
NC_018877_4 4.2|3684008|27|NC_018877|CRT 3684008-3684034 27 MH593831 Podoviridae sp. isolate ctdb7, complete genome 1630-1656 4 0.852
NC_018877_4 4.2|3684008|27|NC_018877|CRT 3684008-3684034 27 NZ_CP049906 Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence 380839-380865 4 0.852
NC_018877_4 4.2|3684008|27|NC_018877|CRT 3684008-3684034 27 NZ_CP054613 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence 963441-963467 4 0.852
NC_018877_4 4.4|3684107|27|NC_018877|CRT 3684107-3684133 27 MN434096 Klebsiella phage JIPh_Kp127, complete genome 81955-81981 4 0.852
NC_018877_4 4.5|3684152|27|NC_018877|CRT 3684152-3684178 27 JQ691611 Cronobacter phage CR9, complete genome 9702-9728 4 0.852
NC_018877_4 4.9|3684323|27|NC_018877|CRT 3684323-3684349 27 MN163280 Klebsiella phage KpGranit, complete genome 83373-83399 4 0.852
NC_018877_4 4.9|3684323|27|NC_018877|CRT 3684323-3684349 27 MN163280 Klebsiella phage KpGranit, complete genome 84576-84602 4 0.852
NC_018877_4 4.12|3684458|27|NC_018877|CRT 3684458-3684484 27 JQ691611 Cronobacter phage CR9, complete genome 9702-9728 4 0.852
NC_018877_4 4.2|3684008|27|NC_018877|CRT 3684008-3684034 27 AP014476 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5C-MedDCM-OCT-S42-C91, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces 18186-18212 5 0.815
NC_018877_4 4.2|3684008|27|NC_018877|CRT 3684008-3684034 27 AP013564 Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C5-MedDCM-OCT-S33-C6, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces 8316-8342 5 0.815
NC_018877_4 4.2|3684008|27|NC_018877|CRT 3684008-3684034 27 AP013944 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5C-MedDCM-OCT-S41-C114, *** SEQUENCING IN PROGRESS *** 8146-8172 5 0.815
NC_018877_4 4.2|3684008|27|NC_018877|CRT 3684008-3684034 27 AP013943 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5C-MedDCM-OCT-S40-C165, *** SEQUENCING IN PROGRESS *** 8990-9016 5 0.815
NC_018877_4 4.2|3684008|27|NC_018877|CRT 3684008-3684034 27 AP013942 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5C-MedDCM-OCT-S39-C99, *** SEQUENCING IN PROGRESS *** 15786-15812 5 0.815
NC_018877_4 4.2|3684008|27|NC_018877|CRT 3684008-3684034 27 AP013945 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5C-MedDCM-OCT-S43-C137, *** SEQUENCING IN PROGRESS *** 3615-3641 5 0.815
NC_018877_4 4.2|3684008|27|NC_018877|CRT 3684008-3684034 27 NZ_LR594690 Variovorax sp. WDL1 plasmid 2 541609-541635 5 0.815
NC_018877_4 4.2|3684008|27|NC_018877|CRT 3684008-3684034 27 NZ_CP023408 Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence 650048-650074 5 0.815
NC_018877_4 4.2|3684008|27|NC_018877|CRT 3684008-3684034 27 NZ_CP023738 Methylosinus trichosporium OB3b plasmid pOB3b1, complete sequence 122815-122841 5 0.815
NC_018877_4 4.2|3684008|27|NC_018877|CRT 3684008-3684034 27 NZ_CP023740 Methylosinus trichosporium OB3b plasmid pOB3b3, complete sequence 57293-57319 5 0.815
NC_018877_4 4.2|3684008|27|NC_018877|CRT 3684008-3684034 27 NC_019718 Enterobacteria phage vB_EcoS_Rogue1, complete genome 9971-9997 5 0.815
NC_018877_4 4.4|3684107|27|NC_018877|CRT 3684107-3684133 27 MN163280 Klebsiella phage KpGranit, complete genome 83373-83399 5 0.815
NC_018877_4 4.4|3684107|27|NC_018877|CRT 3684107-3684133 27 MN163280 Klebsiella phage KpGranit, complete genome 84576-84602 5 0.815
NC_018877_4 4.4|3684107|27|NC_018877|CRT 3684107-3684133 27 JQ691611 Cronobacter phage CR9, complete genome 9702-9728 5 0.815
NC_018877_4 4.4|3684107|27|NC_018877|CRT 3684107-3684133 27 MN101228 Klebsiella phage KPN4, complete genome 27720-27746 5 0.815
NC_018877_4 4.6|3684197|27|NC_018877|CRT 3684197-3684223 27 MN163280 Klebsiella phage KpGranit, complete genome 83373-83399 5 0.815
NC_018877_4 4.6|3684197|27|NC_018877|CRT 3684197-3684223 27 MN163280 Klebsiella phage KpGranit, complete genome 84576-84602 5 0.815
NC_018877_4 4.4|3684107|27|NC_018877|CRT 3684107-3684133 27 MN163280 Klebsiella phage KpGranit, complete genome 81270-81296 6 0.778
NC_018877_4 4.4|3684107|27|NC_018877|CRT 3684107-3684133 27 MN434096 Klebsiella phage JIPh_Kp127, complete genome 85222-85248 6 0.778
NC_018877_4 4.4|3684107|27|NC_018877|CRT 3684107-3684133 27 AP013669 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C108A-MedDCM-OCT-S25-C43, *** SEQUENCING IN PROGRESS *** 3951-3977 6 0.778
NC_018877_4 4.4|3684107|27|NC_018877|CRT 3684107-3684133 27 AP013411 Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C108A-MedDCM-OCT-S29-C43 29528-29554 6 0.778
NC_018877_4 4.4|3684107|27|NC_018877|CRT 3684107-3684133 27 MT380195 Klebsiella phage KP_LZD_B01, complete genome 76467-76493 6 0.778
NC_018877_4 4.4|3684107|27|NC_018877|CRT 3684107-3684133 27 MT380195 Klebsiella phage KP_LZD_B01, complete genome 78603-78629 6 0.778
NC_018877_4 4.4|3684107|27|NC_018877|CRT 3684107-3684133 27 MT380195 Klebsiella phage KP_LZD_B01, complete genome 79815-79841 6 0.778
NC_018877_4 4.4|3684107|27|NC_018877|CRT 3684107-3684133 27 KX845404 Klebsiella phage vB_Kpn_IME260, complete genome 80972-80998 6 0.778
NC_018877_4 4.4|3684107|27|NC_018877|CRT 3684107-3684133 27 KX845404 Klebsiella phage vB_Kpn_IME260, complete genome 83108-83134 6 0.778
NC_018877_4 4.4|3684107|27|NC_018877|CRT 3684107-3684133 27 KX845404 Klebsiella phage vB_Kpn_IME260, complete genome 84320-84346 6 0.778
NC_018877_4 4.5|3684152|27|NC_018877|CRT 3684152-3684178 27 MN163280 Klebsiella phage KpGranit, complete genome 83373-83399 6 0.778
NC_018877_4 4.5|3684152|27|NC_018877|CRT 3684152-3684178 27 MN163280 Klebsiella phage KpGranit, complete genome 84576-84602 6 0.778
NC_018877_4 4.12|3684458|27|NC_018877|CRT 3684458-3684484 27 MN163280 Klebsiella phage KpGranit, complete genome 83373-83399 6 0.778
NC_018877_4 4.12|3684458|27|NC_018877|CRT 3684458-3684484 27 MN163280 Klebsiella phage KpGranit, complete genome 84576-84602 6 0.778
NC_018877_4 4.11|3684404|36|NC_018877|CRT 3684404-3684439 36 MN163280 Klebsiella phage KpGranit, complete genome 83364-83399 7 0.806
NC_018877_4 4.11|3684404|36|NC_018877|CRT 3684404-3684439 36 MN163280 Klebsiella phage KpGranit, complete genome 84567-84602 7 0.806
NC_018877_4 4.11|3684404|36|NC_018877|CRT 3684404-3684439 36 MN101228 Klebsiella phage KPN4, complete genome 27720-27755 8 0.778
NC_018877_5 5.1|5281956|31|NC_018877|CRISPRCasFinder 5281956-5281986 31 JX238501 Bacillus phage phiAGATE, complete genome 124559-124589 8 0.742
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 NZ_CP014851 Bacillus thuringiensis strain HD12 plasmid pHD120112, complete sequence 100650-100683 8 0.765
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 MN812210 Flavobacterium phage vB_FspS_hemulen9-1, complete genome 22854-22887 8 0.765
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 MN812215 Flavobacterium phage vB_FspS_lillamy9-4, complete genome 22191-22224 8 0.765
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 MN812216 Flavobacterium phage vB_FspS_lillamy9-5, complete genome 22191-22224 8 0.765
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 NC_048835 Flavobacterium phage vB_FspS_lillamy9-1, complete genome 22191-22224 8 0.765
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 MN812213 Flavobacterium phage vB_FspS_lillamy9-2, complete genome 22191-22224 8 0.765
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 MN812230 Flavobacterium phage vB_FspS_sniff9-2, complete genome 21831-21864 8 0.765
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 MN812209 Flavobacterium phage vB_FspS_hemulen6-2, complete genome 22983-23016 8 0.765
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 MN812218 Flavobacterium phage vB_FspS_lillamy9-7, complete genome 21454-21487 8 0.765
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 MN812233 Flavobacterium phage vB_FspS_snork9-1, complete genome 22007-22040 8 0.765
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 MN812219 Flavobacterium phage vB_FspS_morran9-1, complete genome 22308-22341 8 0.765
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 MN812217 Flavobacterium phage vB_FspS_lillamy9-6, complete genome 21930-21963 8 0.765
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 NC_048840 Flavobacterium phage vB_FspS_snork6-1, complete genome 22137-22170 8 0.765
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 NC_048839 Flavobacterium phage vB_FspS_sniff9-1, complete genome 22057-22090 8 0.765
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 NC_048842 Flavobacterium phage vB_FspS_stinky9-1, complete genome 21673-21706 8 0.765
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 MN812232 Flavobacterium phage vB_FspS_snork6-2, complete genome 21655-21688 8 0.765
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 MN812208 Flavobacterium phage vB_FspS_hemulen6-1, complete genome 22983-23016 8 0.765
NC_018877_4 4.3|3684053|36|NC_018877|CRT 3684053-3684088 36 MN163280 Klebsiella phage KpGranit, complete genome 83364-83399 9 0.75
NC_018877_4 4.3|3684053|36|NC_018877|CRT 3684053-3684088 36 MN163280 Klebsiella phage KpGranit, complete genome 84567-84602 9 0.75
NC_018877_4 4.11|3684404|36|NC_018877|CRT 3684404-3684439 36 MN434096 Klebsiella phage JIPh_Kp127, complete genome 81946-81981 9 0.75
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 NZ_HG813246 Staphylococcus epidermidis PM221 plasmid 1, complete sequence 47181-47214 11 0.676
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 NZ_HG813246 Staphylococcus epidermidis PM221 plasmid 1, complete sequence 47565-47598 11 0.676
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 NZ_HG813246 Staphylococcus epidermidis PM221 plasmid 1, complete sequence 47949-47982 11 0.676
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 NZ_HG813246 Staphylococcus epidermidis PM221 plasmid 1, complete sequence 48333-48366 11 0.676
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 NZ_HG813246 Staphylococcus epidermidis PM221 plasmid 1, complete sequence 48717-48750 11 0.676
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 NZ_HG813246 Staphylococcus epidermidis PM221 plasmid 1, complete sequence 49101-49134 11 0.676
NC_018877_5 5.2|5282010|34|NC_018877|CRISPRCasFinder 5282010-5282043 34 NZ_HG813246 Staphylococcus epidermidis PM221 plasmid 1, complete sequence 49485-49518 11 0.676

1. spacer 4.9|3684323|27|NC_018877|CRT matches to JQ691611 (Cronobacter phage CR9, complete genome) position: , mismatch: 2, identity: 0.926

tgctcaaggtaacacaggtgctaccgg	CRISPR spacer
tcctcaaggtaacacaggtcctaccgg	Protospacer
* ***************** *******

2. spacer 3.6|3683774|27|NC_018877|CRT matches to MT380195 (Klebsiella phage KP_LZD_B01, complete genome) position: , mismatch: 3, identity: 0.889

cgctactggacctcaaggtaacacggg	CRISPR spacer
tgctactggtcctcaaggtaacaaggg	Protospacer
.******** ************* ***

3. spacer 3.6|3683774|27|NC_018877|CRT matches to KX845404 (Klebsiella phage vB_Kpn_IME260, complete genome) position: , mismatch: 3, identity: 0.889

cgctactggacctcaaggtaacacggg	CRISPR spacer
tgctactggtcctcaaggtaacaaggg	Protospacer
.******** ************* ***

4. spacer 4.6|3684197|27|NC_018877|CRT matches to JQ691611 (Cronobacter phage CR9, complete genome) position: , mismatch: 3, identity: 0.889

tgttcaaggtaacacaggtgctaccgg	CRISPR spacer
tcctcaaggtaacacaggtcctaccgg	Protospacer
* .**************** *******

5. spacer 3.6|3683774|27|NC_018877|CRT matches to JQ691611 (Cronobacter phage CR9, complete genome) position: , mismatch: 4, identity: 0.852

cgctactggacctcaaggtaacacggg	CRISPR spacer
acctactggtcctcaaggtaacacagg	Protospacer
  ******* **************.**

6. spacer 4.2|3684008|27|NC_018877|CRT matches to MH593831 (Podoviridae sp. isolate ctdb7, complete genome) position: , mismatch: 4, identity: 0.852

cgctcaaggacctgctggtgctaccgg	CRISPR spacer
cgctcaaggagctgctggtgctgacgt	Protospacer
********** ***********. ** 

7. spacer 4.2|3684008|27|NC_018877|CRT matches to NZ_CP049906 (Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.852

cgctcaaggacctgctggtgctaccgg	CRISPR spacer
cgctcaaggacctgcaggtgcgccagg	Protospacer
*************** *****  * **

8. spacer 4.2|3684008|27|NC_018877|CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 4, identity: 0.852

cgctcaaggacctgctggtgctaccgg	CRISPR spacer
cgctcaaggacctgccggtgcagctgg	Protospacer
***************.***** .*.**

9. spacer 4.4|3684107|27|NC_018877|CRT matches to MN434096 (Klebsiella phage JIPh_Kp127, complete genome) position: , mismatch: 4, identity: 0.852

cgttcaaggtaacacaggtgctactgg	CRISPR spacer
ccctcagggtaacactggtgctactgg	Protospacer
* .***.******** ***********

10. spacer 4.5|3684152|27|NC_018877|CRT matches to JQ691611 (Cronobacter phage CR9, complete genome) position: , mismatch: 4, identity: 0.852

cgttcaaggtaacacaggtgctaccgg	CRISPR spacer
tcctcaaggtaacacaggtcctaccgg	Protospacer
. .**************** *******

11. spacer 4.9|3684323|27|NC_018877|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 4, identity: 0.852

tgctcaaggtaacacaggtgctaccgg	CRISPR spacer
tccacagggtaacacaggtgctactgg	Protospacer
* * **.*****************.**

12. spacer 4.9|3684323|27|NC_018877|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 4, identity: 0.852

tgctcaaggtaacacaggtgctaccgg	CRISPR spacer
tccacagggtaacacaggtgctactgg	Protospacer
* * **.*****************.**

13. spacer 4.12|3684458|27|NC_018877|CRT matches to JQ691611 (Cronobacter phage CR9, complete genome) position: , mismatch: 4, identity: 0.852

cgttcaaggtaacacaggtgctaccgg	CRISPR spacer
tcctcaaggtaacacaggtcctaccgg	Protospacer
. .**************** *******

14. spacer 4.2|3684008|27|NC_018877|CRT matches to AP014476 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5C-MedDCM-OCT-S42-C91, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 5, identity: 0.815

cgctcaaggacctgctggtgctaccgg	CRISPR spacer
tcctcaaggacctgctggtgctgatgg	Protospacer
. ********************. .**

15. spacer 4.2|3684008|27|NC_018877|CRT matches to AP013564 (Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C5-MedDCM-OCT-S33-C6, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces) position: , mismatch: 5, identity: 0.815

cgctcaaggacctgctggtgctaccgg	CRISPR spacer
tcctcaaggacctgctggtgctgatgg	Protospacer
. ********************. .**

16. spacer 4.2|3684008|27|NC_018877|CRT matches to AP013944 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5C-MedDCM-OCT-S41-C114, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.815

cgctcaaggacctgctggtgctaccgg	CRISPR spacer
tcctcaaggacctgctggtgctgatgg	Protospacer
. ********************. .**

17. spacer 4.2|3684008|27|NC_018877|CRT matches to AP013943 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5C-MedDCM-OCT-S40-C165, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.815

cgctcaaggacctgctggtgctaccgg	CRISPR spacer
tcctcaaggacctgctggtgctgatgg	Protospacer
. ********************. .**

18. spacer 4.2|3684008|27|NC_018877|CRT matches to AP013942 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5C-MedDCM-OCT-S39-C99, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.815

cgctcaaggacctgctggtgctaccgg	CRISPR spacer
tcctcaaggacctgctggtgctgatgg	Protospacer
. ********************. .**

19. spacer 4.2|3684008|27|NC_018877|CRT matches to AP013945 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5C-MedDCM-OCT-S43-C137, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.815

cgctcaaggacctgctggtgctaccgg	CRISPR spacer
tcctcaaggacctgctggtgctgatgg	Protospacer
. ********************. .**

20. spacer 4.2|3684008|27|NC_018877|CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 5, identity: 0.815

cgctcaaggacctgctggtgctaccgg	CRISPR spacer
cactcaaggacctgctggtgcaggccg	Protospacer
*.******************* . * *

21. spacer 4.2|3684008|27|NC_018877|CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.815

cgctcaaggacctgctggtgctaccgg	CRISPR spacer
agctcaaggaccagctggtgctgctga	Protospacer
 *********** *********.*.*.

22. spacer 4.2|3684008|27|NC_018877|CRT matches to NZ_CP023738 (Methylosinus trichosporium OB3b plasmid pOB3b1, complete sequence) position: , mismatch: 5, identity: 0.815

cgctcaaggacctgctggtgctaccgg	CRISPR spacer
cgctcaaggacctgctggtcattctcg	Protospacer
*******************  * *. *

23. spacer 4.2|3684008|27|NC_018877|CRT matches to NZ_CP023740 (Methylosinus trichosporium OB3b plasmid pOB3b3, complete sequence) position: , mismatch: 5, identity: 0.815

cgctcaaggacctgctggtgctaccgg	CRISPR spacer
cgctcaaggacctgctggtcattctcg	Protospacer
*******************  * *. *

24. spacer 4.2|3684008|27|NC_018877|CRT matches to NC_019718 (Enterobacteria phage vB_EcoS_Rogue1, complete genome) position: , mismatch: 5, identity: 0.815

cgctcaaggacctgctggtgctaccgg	CRISPR spacer
tccacaaggcccagctggtgctaccgg	Protospacer
. * ***** ** **************

25. spacer 4.4|3684107|27|NC_018877|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 5, identity: 0.815

cgttcaaggtaacacaggtgctactgg	CRISPR spacer
tccacagggtaacacaggtgctactgg	Protospacer
. . **.********************

26. spacer 4.4|3684107|27|NC_018877|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 5, identity: 0.815

cgttcaaggtaacacaggtgctactgg	CRISPR spacer
tccacagggtaacacaggtgctactgg	Protospacer
. . **.********************

27. spacer 4.4|3684107|27|NC_018877|CRT matches to JQ691611 (Cronobacter phage CR9, complete genome) position: , mismatch: 5, identity: 0.815

cgttcaaggtaacacaggtgctactgg	CRISPR spacer
tcctcaaggtaacacaggtcctaccgg	Protospacer
. .**************** ****.**

28. spacer 4.4|3684107|27|NC_018877|CRT matches to MN101228 (Klebsiella phage KPN4, complete genome) position: , mismatch: 5, identity: 0.815

cgttcaaggtaacacaggtgctactgg	CRISPR spacer
tcctcagggtaacactggtgctactgg	Protospacer
. .***.******** ***********

29. spacer 4.6|3684197|27|NC_018877|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 5, identity: 0.815

tgttcaaggtaacacaggtgctaccgg	CRISPR spacer
tccacagggtaacacaggtgctactgg	Protospacer
* . **.*****************.**

30. spacer 4.6|3684197|27|NC_018877|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 5, identity: 0.815

tgttcaaggtaacacaggtgctaccgg	CRISPR spacer
tccacagggtaacacaggtgctactgg	Protospacer
* . **.*****************.**

31. spacer 4.4|3684107|27|NC_018877|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 6, identity: 0.778

cgttcaaggtaacacaggtgctactgg	CRISPR spacer
tccacagggtaacaccggtgctactgg	Protospacer
. . **.******** ***********

32. spacer 4.4|3684107|27|NC_018877|CRT matches to MN434096 (Klebsiella phage JIPh_Kp127, complete genome) position: , mismatch: 6, identity: 0.778

cgttcaaggtaacacaggtgctactgg	CRISPR spacer
tccacaaggtaacaaaggtgatactgg	Protospacer
. . ********** ***** ******

33. spacer 4.4|3684107|27|NC_018877|CRT matches to AP013669 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C108A-MedDCM-OCT-S25-C43, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.778

cgttcaaggtaacacaggtgctactgg	CRISPR spacer
accacaaggtaatacaggagctactgg	Protospacer
  . ********.***** ********

34. spacer 4.4|3684107|27|NC_018877|CRT matches to AP013411 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C108A-MedDCM-OCT-S29-C43) position: , mismatch: 6, identity: 0.778

cgttcaaggtaacacaggtgctactgg	CRISPR spacer
accacaaggtaatacaggagctactgg	Protospacer
  . ********.***** ********

35. spacer 4.4|3684107|27|NC_018877|CRT matches to MT380195 (Klebsiella phage KP_LZD_B01, complete genome) position: , mismatch: 6, identity: 0.778

cgttcaaggtaacacaggtgctactgg	CRISPR spacer
tccacagggtaacactggtgctactgg	Protospacer
. . **.******** ***********

36. spacer 4.4|3684107|27|NC_018877|CRT matches to MT380195 (Klebsiella phage KP_LZD_B01, complete genome) position: , mismatch: 6, identity: 0.778

cgttcaaggtaacacaggtgctactgg	CRISPR spacer
tccacagggtaacactggtgctactgg	Protospacer
. . **.******** ***********

37. spacer 4.4|3684107|27|NC_018877|CRT matches to MT380195 (Klebsiella phage KP_LZD_B01, complete genome) position: , mismatch: 6, identity: 0.778

cgttcaaggtaacacaggtgctactgg	CRISPR spacer
tccgcagggtaacactggtgctactgg	Protospacer
. . **.******** ***********

38. spacer 4.4|3684107|27|NC_018877|CRT matches to KX845404 (Klebsiella phage vB_Kpn_IME260, complete genome) position: , mismatch: 6, identity: 0.778

cgttcaaggtaacacaggtgctactgg	CRISPR spacer
tccacagggtaacactggtgctactgg	Protospacer
. . **.******** ***********

39. spacer 4.4|3684107|27|NC_018877|CRT matches to KX845404 (Klebsiella phage vB_Kpn_IME260, complete genome) position: , mismatch: 6, identity: 0.778

cgttcaaggtaacacaggtgctactgg	CRISPR spacer
tccacagggtaacactggtgctactgg	Protospacer
. . **.******** ***********

40. spacer 4.4|3684107|27|NC_018877|CRT matches to KX845404 (Klebsiella phage vB_Kpn_IME260, complete genome) position: , mismatch: 6, identity: 0.778

cgttcaaggtaacacaggtgctactgg	CRISPR spacer
tccgcagggtaacactggtgctactgg	Protospacer
. . **.******** ***********

41. spacer 4.5|3684152|27|NC_018877|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 6, identity: 0.778

cgttcaaggtaacacaggtgctaccgg	CRISPR spacer
tccacagggtaacacaggtgctactgg	Protospacer
. . **.*****************.**

42. spacer 4.5|3684152|27|NC_018877|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 6, identity: 0.778

cgttcaaggtaacacaggtgctaccgg	CRISPR spacer
tccacagggtaacacaggtgctactgg	Protospacer
. . **.*****************.**

43. spacer 4.12|3684458|27|NC_018877|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 6, identity: 0.778

cgttcaaggtaacacaggtgctaccgg	CRISPR spacer
tccacagggtaacacaggtgctactgg	Protospacer
. . **.*****************.**

44. spacer 4.12|3684458|27|NC_018877|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 6, identity: 0.778

cgttcaaggtaacacaggtgctaccgg	CRISPR spacer
tccacagggtaacacaggtgctactgg	Protospacer
. . **.*****************.**

45. spacer 4.11|3684404|36|NC_018877|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 7, identity: 0.806

tgctcaaggtaacacaggtgctactggtgctaccgg	CRISPR spacer
tccacagggtaacacaggtgctactggtcctcaggg	Protospacer
* * **.********************* **   **

46. spacer 4.11|3684404|36|NC_018877|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 7, identity: 0.806

tgctcaaggtaacacaggtgctactggtgctaccgg	CRISPR spacer
tccacagggtaacacaggtgctactggtcctcaggg	Protospacer
* * **.********************* **   **

47. spacer 4.11|3684404|36|NC_018877|CRT matches to MN101228 (Klebsiella phage KPN4, complete genome) position: , mismatch: 8, identity: 0.778

tgctcaaggtaacacaggtgctactggtgctaccgg	CRISPR spacer
tcctcagggtaacactggtgctactggttcccaagg	Protospacer
* ****.******** ************ *.   **

48. spacer 5.1|5281956|31|NC_018877|CRISPRCasFinder matches to JX238501 (Bacillus phage phiAGATE, complete genome) position: , mismatch: 8, identity: 0.742

ttcttcttttttgtcactagttgaaccgctt	CRISPR spacer
ctaaccttttttgccactagttaaaccgccc	Protospacer
.*  .********.********.******..

49. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to NZ_CP014851 (Bacillus thuringiensis strain HD12 plasmid pHD120112, complete sequence) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tttatcttcttttttattttctggtttattttcc	Protospacer
.**.****** ****************  * ..*

50. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to MN812210 (Flavobacterium phage vB_FspS_hemulen9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

51. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to MN812215 (Flavobacterium phage vB_FspS_lillamy9-4, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

52. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to MN812216 (Flavobacterium phage vB_FspS_lillamy9-5, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

53. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to NC_048835 (Flavobacterium phage vB_FspS_lillamy9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

54. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to MN812213 (Flavobacterium phage vB_FspS_lillamy9-2, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

55. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to MN812230 (Flavobacterium phage vB_FspS_sniff9-2, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

56. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to MN812209 (Flavobacterium phage vB_FspS_hemulen6-2, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

57. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to MN812218 (Flavobacterium phage vB_FspS_lillamy9-7, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

58. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to MN812233 (Flavobacterium phage vB_FspS_snork9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

59. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to MN812219 (Flavobacterium phage vB_FspS_morran9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

60. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to MN812217 (Flavobacterium phage vB_FspS_lillamy9-6, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

61. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to NC_048840 (Flavobacterium phage vB_FspS_snork6-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

62. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to NC_048839 (Flavobacterium phage vB_FspS_sniff9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

63. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to NC_048842 (Flavobacterium phage vB_FspS_stinky9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

64. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to MN812232 (Flavobacterium phage vB_FspS_snork6-2, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

65. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to MN812208 (Flavobacterium phage vB_FspS_hemulen6-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

66. spacer 4.3|3684053|36|NC_018877|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 9, identity: 0.75

cgttcaaggtaacacaggtgctactggtgctaccgg	CRISPR spacer
tccacagggtaacacaggtgctactggtcctcaggg	Protospacer
. . **.********************* **   **

67. spacer 4.3|3684053|36|NC_018877|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 9, identity: 0.75

cgttcaaggtaacacaggtgctactggtgctaccgg	CRISPR spacer
tccacagggtaacacaggtgctactggtcctcaggg	Protospacer
. . **.********************* **   **

68. spacer 4.11|3684404|36|NC_018877|CRT matches to MN434096 (Klebsiella phage JIPh_Kp127, complete genome) position: , mismatch: 9, identity: 0.75

tgctcaaggtaacacaggtgctactggtgctaccgg	CRISPR spacer
ccctcagggtaacactggtgctactggtccacaagg	Protospacer
. ****.******** ************ *    **

69. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

70. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

71. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

72. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

73. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

74. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

75. spacer 5.2|5282010|34|NC_018877|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 312731 : 321107 8 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_2 661189 : 669349 8 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_3 691215 : 721271 42 Bacillus_phage(61.54%) terminase,integrase,capsid attL 690461:690476|attR 714316:714331
DBSCAN-SWA_4 725678 : 735936 10 Bacillus_phage(100.0%) bacteriocin NA
DBSCAN-SWA_5 1844479 : 1901904 72 Bacillus_phage(68.57%) integrase,terminase,transposase,portal,holin,tail attL 1840005:1840023|attR 1906791:1906809
DBSCAN-SWA_6 1938783 : 1948082 8 Bacillus_phage(71.43%) NA NA
DBSCAN-SWA_7 2368858 : 2375939 9 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_8 2582925 : 2649913 75 Bacillus_phage(62.86%) protease,integrase,terminase,transposase,portal,bacteriocin,tail,tRNA,capsid attL 2583333:2583349|attR 2648578:2648594
DBSCAN-SWA_9 3729538 : 3850279 111 Bacillus_phage(51.92%) coat,protease,integrase,head,terminase,transposase,portal,holin,bacteriocin,tail,tRNA,capsid attL 3805653:3805670|attR 3822000:3822017
DBSCAN-SWA_10 4535791 : 4543474 9 Staphylococcus_phage(16.67%) NA NA
DBSCAN-SWA_11 4737287 : 4744331 9 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_12 4891799 : 4980343 95 Bacillus_phage(67.86%) coat,protease,integrase,head,tRNA,terminase,plate,transposase,portal,holin,tail,capsid attL 4886359:4886382|attR 4982357:4982380
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage