CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_018141	Legionella pneumophila subsp. pneumophila plasmid pLELO, complete sequence	0 crisprs	WYL,DinG	0	0	0	0
NC_018139	Legionella pneumophila subsp. pneumophila, complete genome	2 crisprs	DEDDh,DinG,cas3,WYL,csa3	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_018139_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018139_1

1333629-1333737

Orphan

Consensus_repeat	Method
CAAAAATATGGCTATAATTATATATAATTTGCTTGGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_018139_1

>merge|NC_018139|1|1333629-1333737|CRISPRCasFinder
CAAAAATATGGCTATAATTATATATAATTTGCTTGGGATATTGATAGCACGTGCACCGGCCTGAGTAAATCCAAAAATATGGCTATAATTATATATAATTTGCTTGGGA

>NC_018139|1|1|1333629-1333737|CRISPRCasFinder
CAAAAATATGGCTATAATTATATATAATTTGCTTGGGA	TATTGATAGCACGTGCACCGGCCTGAGTAAATC
CAAAAATATGGCTATAATTATATATAATTTGCTTGGGA

Protein	Signature genes	Signature genes Name	Protein_function
NC_018139.1\|WP_010947033.1\|1324970_1325759_+\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NC_018139.1\|WP_014841488.1\|1342654_1343869_-\|legiobactin-export-MFS-transporter-LbtB	unknown	unknown	gnl\|CDD\|340949
NC_018139.1\|WP_041174051.1\|1325759_1326383_+\|phosphoribosylanthranilate-isomerase	unknown	unknown	gnl\|CDD\|234923
NC_018139.1\|WP_014841485.1\|1338196_1339225_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NC_018139.1\|WP_014841484.1\|1335648_1338024_-\|GspD-family-T2SS-secretin-variant-LspD	unknown	unknown	gnl\|CDD\|274175
NC_018139.1\|WP_014841474.1\|1322961_1323429_-\|DUF2269-domain-containing-protein	unknown	unknown	gnl\|CDD\|370783
NC_018139.1\|WP_014841491.1\|1347210_1347525_+\|DUF4286-family-protein	unknown	unknown	gnl\|CDD\|379477
NC_018139.1\|WP_014841478.1\|1327609_1328428_+\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
NC_018139.1\|WP_014841483.1\|1334160_1335645_-\|GspE-family-T2SS-ATPase-variant-LspE	unknown	unknown	gnl\|CDD\|131585
NC_018139.1\|WP_014841482.1\|1333745_1334060_+\|hypothetical-protein	unknown	unknown	unknown
NC_018139.1\|WP_080031659.1\|1345736_1346822_-\|siderophore-legiobactin-import-outer-membrane-protein-LbtU	unknown	unknown	unknown
NC_018139.1\|WP_014841481.1\|1331631_1333545_+\|DUF3413-domain-containing-protein	unknown	unknown	gnl\|CDD\|225625
NC_018139.1\|WP_014841475.1\|1323428_1324727_-\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187579
NC_018139.1\|WP_014841477.1\|1326384_1327584_+\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288
NC_018139.1\|WP_014841487.1\|1341497_1342658_-\|legiobactin-import-MFS-transporter-LbtC	unknown	unknown	gnl\|CDD\|340878
NC_018139.1\|WP_014841479.1\|1328424_1330080_+\|glutamine--tRNA-ligase/YqeY-domain-fusion-protein	unknown	unknown	gnl\|CDD\|235424
NC_018139.1\|WP_014841473.1\|1320232_1322908_+\|FimV-protein	unknown	unknown	gnl\|CDD\|225711
NC_018139.1\|WP_014841486.1\|1339248_1341354_-\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NC_018139.1\|WP_014841480.1\|1330089_1331460_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NC_018139.1\|WP_014841489.1\|1343861_1345604_-\|siderophore-legiobactin-biosynthesis-protein-LbtA	unknown	unknown	gnl\|CDD\|377237

Protein	Function_ID	Function_description	E-value
NC_018139.1\|WP_010947033.1\|1324970_1325759_+\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	5.93673e-137
NC_018139.1\|WP_014841488.1\|1342654_1343869_-\|legiobactin-export-MFS-transporter-LbtB	gnl\|CDD\|340949	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.74159e-37
NC_018139.1\|WP_041174051.1\|1325759_1326383_+\|phosphoribosylanthranilate-isomerase	gnl\|CDD\|234923	PRK01222, PRK01222, phosphoribosylanthranilate isomerase.	1.61753e-94
NC_018139.1\|WP_014841485.1\|1338196_1339225_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	4.36124e-55
NC_018139.1\|WP_014841484.1\|1335648_1338024_-\|GspD-family-T2SS-secretin-variant-LspD	gnl\|CDD\|274175	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D. In Gram-negative bacteria, proteins that have first crossed the inner member by Sec-dependent protein transport can be exported across the outer membrane by type II secretion, also called the main terminal branch of the general secretion pathway. Members of this family are general secretion pathway protein D. In Yersinia enterocolitica, a second member of this family is part of a novel second type II secretion system specifically associated with virulence (See ). This family is closely homologous to the type IV pilus outer membrane secretin PilQ (TIGR02515) and to the type III secretion system pore YscC/HrcC (TIGR02516). [Protein fate, Protein and peptide secretion and trafficking].	1.16839e-136
NC_018139.1\|WP_014841474.1\|1322961_1323429_-\|DUF2269-domain-containing-protein	gnl\|CDD\|370783	pfam10027, DUF2269, Predicted integral membrane protein (DUF2269). Members of this family of bacterial hypothetical integral membrane proteins have no known function.	9.65744e-61
NC_018139.1\|WP_014841491.1\|1347210_1347525_+\|DUF4286-family-protein	gnl\|CDD\|379477	pfam14114, DUF4286, Domain of unknown function (DUF4286). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 100 and 112 amino acids in length.	3.92667e-21
NC_018139.1\|WP_014841478.1\|1327609_1328428_+\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	6.82046e-128
NC_018139.1\|WP_014841483.1\|1334160_1335645_-\|GspE-family-T2SS-ATPase-variant-LspE	gnl\|CDD\|131585	TIGR02533, Type_II_secretion_system_protein_E, type II secretion system protein E. This family describes GspE, the E protein of the type II secretion system, also called the main terminal branch of the general secretion pathway. This model separates GspE from the PilB protein of type IV pilin biosynthesis. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NC_018139.1\|WP_014841486.1\|1339248_1341354_-\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	8.36265e-66
NC_018139.1\|WP_014841481.1\|1331631_1333545_+\|DUF3413-domain-containing-protein	gnl\|CDD\|225625	COG3083, COG3083, Predicted hydrolase of alkaline phosphatase superfamily [General function prediction only].	1.16729e-109
NC_018139.1\|WP_014841475.1\|1323428_1324727_-\|NAD(P)H-binding-protein	gnl\|CDD\|187579	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs. This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.77312e-81
NC_018139.1\|WP_014841477.1\|1326384_1327584_+\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
NC_018139.1\|WP_014841487.1\|1341497_1342658_-\|legiobactin-import-MFS-transporter-LbtC	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.45022e-62
NC_018139.1\|WP_014841479.1\|1328424_1330080_+\|glutamine--tRNA-ligase/YqeY-domain-fusion-protein	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
NC_018139.1\|WP_014841473.1\|1320232_1322908_+\|FimV-protein	gnl\|CDD\|225711	COG3170, FimV, Tfp pilus assembly protein FimV [Cell motility and secretion / Intracellular trafficking and secretion].	8.47245e-36
NC_018139.1\|WP_014841480.1\|1330089_1331460_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NC_018139.1\|WP_014841489.1\|1343861_1345604_-\|siderophore-legiobactin-biosynthesis-protein-LbtA	gnl\|CDD\|377237	pfam04183, IucA_IucC, IucA / IucC family. IucA and IucC catalyze discrete steps in biosynthesis of the siderophore aerobactin from N epsilon-acetyl-N epsilon-hydroxylysine and citrate. This family represents the N-terminal region. The C-terminal region appears to be related to iron transporter proteins.	1.38172e-68

>NC_018139.1|WP_014841481.1|1331631_1333545_+|DUF3413-domain-containing-protein
MNIKTYLKKNDLTLRFVGWFFLINSFIFWLVGLGYLKSILLNASLFKNYIADYSSLSGKILILVFSVLNYFTYMMFLAFVPAIPIIIMAFFLPYKRIIWIISVVASTTSLIFLFVDSQVFSMFKFHLNKTILSFVFNSDWSVIFTFSRYELILSFFMIVFILFLESIVAWLVWKKIVLKERLKIGKTISLFWLGGALISYFILLLSIAQNNNLFAQQIPNLPLYNQLIAYTIPDKNADDILRRYSEHYFTQPLFPNYPLHYPLHPMQCKMPEKPYNIILIMVDSLRYDSLSAKYMPNTVQFAKRSWQFSQHMSAGNATQPGLFSLFYSIPSNYSTAVLEQKKSPVLIDLLLQHGYQTKIIWSGSMAPLPLDQTIYKNIANLNTNGAPIDDTGDKDRYSTKEAIQFLTDPKTNNPFFLHIFYNAPHDYCRYQSFPQLYKPAIEECVRIGMTNHVDPVPYYNRYLNAVTFIDQEISKVLGVIEKKGYLKNSIIIITSDHGQEFNDNRQNYWGHTSNFTPIQLHVPMIIHWPGELARRFNHLTSSYDIVPTILQRLFACKNPVSDYSIGYNLLIEGNRASFLLVGSYINMGIFEADRATALETSGRITVTGMKAEPLDDAVPRMDVITKALDLMRKYYGK
>NC_018139.1|WP_014841480.1|1330089_1331460_+|cysteine--tRNA-ligase
MLHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDVTYVRNITDIDDKIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKDSAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQSEAATGKPFANYWLHVGMLQINGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEYWQEQFNQAMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEEEKLVIEQLIAERLKARAERNWAKADQIRADLLSKGIELEDGATGTTWRRIAE
>NC_018139.1|WP_014841479.1|1328424_1330080_+|glutamine--tRNA-ligase/YqeY-domain-fusion-protein
MTEQTEKRAHFIRQLIIDDLANGKHQGIVTRFPPEPNGYLHVGHAKSICLNFGLAEEFKGKCFLRFDDTNPIKEEEEYVNAIIDDVRWLGFEWCAMTHSSDYYHELYELAIYLIKKDMAYVDSLSMEEIRAFRGTLQEPGRESPYRNRTIEENLDLFARMKAGDFPDGTHVLRAKIDMKSGNLNMRDPVLYRIRHARHQRTGDEWCIYPMYDYAHPISDALEKITHSLCTLEFQDHRPLYDWLVDNLPLPAKPVQTEFARLNLSHTVTSKRKLRELVEKKIVTGWDDPRLPTLRGMRKRGYPPAAIRQFCEIIGISRSDSVIDMSLLEECVRAEFNKTAKRALCVMDPLKVVIVNYPENKVEQLQAAFYPQNPESESRNLPFSREIYIEKSDFMENPPNKYFRLSPGAEVRLRHAYVIKCQEVIRNDQGEITELHCTYDENTLGKNPEDRKVKGVIHWVSSSHAYPVTIYQYDRLFTDPNPAREEDYFQFLNHNSLQTLQGFCEPAMAEQAEGDVFQFERLGYYCVNSVAEGCVQAFHRVVDLKDTWGKVS
>NC_018139.1|WP_014841478.1|1327609_1328428_+|tryptophan-synthase-subunit-alpha
MNRIDKTLEKLKANRKKMLSPYITAGDPYPELTVSLMHQLVKSGADVLELGIPFSDPMAEGPVIQRAMERALAHSIHCDDVLNMVRQFRKTDTETPVILMGYLNPIEQYGYDLFAQQAVEAGVDGTILVDLPPEEADGVSRVWQKHGLYSIYLCSPTTSAERMNFINQHANGYLYYVSLKGVTGSDALKLPELKAQYLQRKAQSKLPLMVGFGIKTSEMAAQVAEFADGVIVGAALINEIIEAYEAKKDPLQASGALLSSMRQAIDNIGSMV
>NC_018139.1|WP_014841477.1|1326384_1327584_+|tryptophan-synthase-subunit-beta
MIKKELPDEFGHFGPYGGMFVADTLVHALKQLEHAYTKYRNDQDFLSELHTELKDYVGRPNPLYHAVHLSKKIGGAQIYLKREDLNHTGAHKINNTIGQALLAKRMRKTRVIAETGAGQHGVATATVAAKFGFQCVVYMGSEDIKRQSSNVYRMKLLGAEVVPVTSGSKTLKDALNEALRDWVSHVDDTFYIIGTVAGPHPYPQMVRDFQAIIGVEARAQHMEKTGRLPDALVACVGGGSNAIGLFYPFLNDQSVMIYGVEAGGKGIETGEHSASLIAGKPGVLHGNRTYLLCDEYGQVKDTHSVSAGLDYPGVGPEHAYLKDTGRVIYKAINDSEALDAFRLLTHTEGIIPALESSHAVAYAIQLAKTMSKEQSIIVNLSGRGDKDMHTVAAIDGITI
>NC_018139.1|WP_041174051.1|1325759_1326383_+|phosphoribosylanthranilate-isomerase
MNPSRIRVKMCGMTSSEDIQYAIDLGVDAIGLIFYPKSARNVSLEKARIIVNNIPPFVDIVAVLVNPEQSFVQLIINEIPVQLLQFHGEESSEFCRQFNKPFIKAIHPKTAIQIQSAVDEFFDASAILLDTPSDKGRGGTGLTFDWNIIPENLSKPYILAGGLNESNILEAITMCHPYAVDVCSGIEASPGVKDHLKMSRFIKAIWG
>NC_018139.1|WP_010947033.1|1324970_1325759_+|tRNA-pseudouridine(38-40)-synthase-TruA
MRIALVVEYDGSQYHGWQAQTGLHTIQQAVEFALSKVADSSISVVCAGRTDTGVHATNQVIHFDCEKDRSIRAWIHGANTFLPKDICVKWGKEMPENFHARYSAVSRRYRYVIYNGAIRPGLLRGNVTWQYRQLDHRLMQQGGQCLLGENDFTSFRSVECQSNTPMRNIHQLQVTRHGDLVVLDITANAFLHHMVRNIAGVLIAVGSGKHPVGWVKDVLNAKDRKLGAETAPSYGLYLVQVTYPKEFGLLQNNPGPLFLWEK
>NC_018139.1|WP_014841475.1|1323428_1324727_-|NAD(P)H-binding-protein
MKILVTGASGFIASQFVTDLLIAGHEIICCVRNTKHTQRIFPGAQVIFCDFINDTKPEIWSKRLQGIDVVINCVGILYHPDEKIIWNVHYETPKALFDACINSGVKKIIQISALGIDKVDVNYAASKKAIDDYLLTLSIPSVIVRPSYVYGKGSYGGSSLFRGIAGTPFFTAIPGQGTQKFQPISLNDLSQAIVRLVSTPVTETIILHAVSKKIITLEEIIIKLRSWLGFTKTRIIHIPLTFIRLLTRLGDLLPYSTINTVSYKMLASDNITTQEETQRFADYVNFTPRDYEEGLYSQPSSVQDHWHAQLYFLKLPLRLGISFVWIWTALCCLFFYPKSDSLSLFAQIGFSSLWQLFLFYASALWDGLLGIAMLLNYRFKLTSILQLITILVYTVIITIKLPYLWLDPFAPIAKNIPLLIAILIGLGLESDK
>NC_018139.1|WP_014841474.1|1322961_1323429_-|DUF2269-domain-containing-protein
MLYFYLKFIHVLSSTILFGTGIGTASVMIYGHRTKNSIVIAAISKYVVFADWIFTGTSGILQPLTGFAMIYLAGFSWTSLWILGSILGYVVAACCWFPVVCLQIKMRDLAIETVKNNTTLPEKYHRYFLYWFILGWPAFLSLVGVFYLMTNKPVF
>NC_018139.1|WP_014841473.1|1320232_1322908_+|FimV-protein
MKKTVLHAAIFSLTMPISLYALGLGEMKVQSSLDQPFSAEIELIDVGADPLASIKVSLADPEQFEQIGLERTAVLSLLRFQVERNPKGTPVVKVSSTERMTEPYMEIVVDLTWPKGQLYKAYTVLLDPPGYQLGITTAQSRPVYYKKKSASYSNEPGVIEKTVITTVEHGPVSRSDSKKKTTYGPTVTNENVWQIAQRYKTSKLILPQVVLAIVGVNPEAFKDGNLNGLKVGVRLVIPSTEEIAKVPSDLAIEEVMAHDKAWNEHTSINHVLAPPYINSSIVDMTSKQSKASSIPVIPKFTIGEKSNIPTLQQLIPDSTSVSIDTSTQQQPVQNNNIVQTTEQNEKIKAEISITTAAVESVREANALLMEQLRILQEQNKKLQEKLDKREKEIELMRAQVQTMLKERKAIASQVSSLPNKEQGMNLWPYIILLIFAAGGAGFAYWYLRQRQHREDISPYKTDSDSSPKPFMPLVEPAKYEPDTQADDKEISVQEKVSDSEKETGVGVSKADWTEYQPKEMDKIEKADAVESETVEDVTYLGGKEQLRSKEYTELEPEVQVKPEVQTKPEVQIKPEVQTKPEVQTKPEVQTKPEVQTKPEAQTKPEVQTKPEAQTKPEAQTKPEVQTKPEVQSKPEVQAEPEAQAEPEEQAGENQIMFEPVMEPGQLDVNRDDEVDNSQFSEDESQQTEGHQSSEMIEFESGLHELIKDKPKTKITESTDEGDDNGIDFIPLTTNDADETLKHEQEIEKSDKKEDKKSEEFSTKENKLDLDNSDFDMKNLESEPEISQEEKEAHISEITEFDQKSTQEEKTEKGISTSQSVDKATFTKSSGENNETSNPLKSKKALDTLLDLAKTYISMGDIETARSSLEEVIEHGSANQKEQARQLLDQLK
>NC_018139.1|WP_014841482.1|1333745_1334060_+|hypothetical-protein
MANQTRENLINKAKNGSESIALIYSPIELHEYIVEIISKDSDHFIHKGKEICHFNSIDEAVSRATELGAKEFFLCADNTYDECGSANSVQHFDYIPIYSKFKHT
>NC_018139.1|WP_014841483.1|1334160_1335645_-|GspE-family-T2SS-ATPase-variant-LspE
MENEEKSLKIPYSFAKSNGIVVGEIQENLAIVYHLPNTPLQAFAEIKRLLQCELDLKQVDESTFQQHLANIYQSKSSILDAAEGMEEDMDLSMLASQLPVSEDLLENQDDAPIIRLLNALFTQAIKQKASDIHIETYEDRVLVRNRIDGVLQEVLEIQRAIAPLVISRVKVMAKLDIAEKRIPQDGRISLRIGGHNIDVRVSTLPSNHGERVVLRILDKQAAQLDLNLLGMPEHTLKTVRQMIAEPHGIILVTGPTGSGKTTSLYAMLTELNQVTRNILTIEDPIEYDLPGVGQTQVNTKVQMTFAKGLRAILRQDPDVVMIGEIRDLETAEIAVQASLTGHLVLSTLHTNTALGALTRLHDMGVESFLLSSSIVGLIAQRLVRKLCSHCKTPHELRQEEKELMGLKPDTDVSQVFEPKGCDYCNHLGYKGRTGIYELIIVDETLRGMIHRNENIQTMENYLRPTTPSIREDGFKRVLCGDTSLAEILRVTSQN
>NC_018139.1|WP_014841484.1|1335648_1338024_-|GspD-family-T2SS-secretin-variant-LspD
MRSIVIILLAFVCCSLVRANDVNISTVTKDGNTFFYLQAGAYNLEKDAKIRQNELAKLVDQKVEIKNLADKHLYLVQIGPIDDYQTARALKEKLSQKTERQFNQINKNQTSSLEVSQLPKNMEQAQTAPPGSKLWNLRNADIRAVIAEVSRITGKNFVIDPRVQGKVSIVSSTPLSSRELYQVFLSVLQVSGYAAIPNGEIIKIIPNIDAKTQSPDLLSGMKSPPRGDDMMVAVIPVHYVPSEQLVPVLRPLMPQWSSVSAYAPSNMLILSGRANNIKSLAEIIKQVDSSSANGIDMVRLHHALAMDVANTLKDLVKTQPGIGSRTQITIAADDRSNSILVSGSKTDRIRLRMLILKLDKDSSTGVNSNTQVVYLNYLRAEDLVPILAGIAQANFSGNVGTTIGTITRPALDSTNPASSLANTSADGQSSSLSSTSTSSAPMNASGATANTTSASTQNEGSTKPTVQIIGEPNTNSIILNAPASIIRILKTVISQLDIKPAQLLIEALVAEVDEKDVNNLGIEWGSNQQTGNPKDFRPGFAIINSKTRIDDFQAQIYALAREQRANILSTPSVVVLDNRQAKILIGKQVSIATTSYPNNAGGTTTASPFTTFDRVNVALHLYVRPQITRGQGIQLQIDQGNDTLDPATATTDNTTTPTFNISSIVTSVHVESGDIVVLGGLIQDSIGNDNNKLPILGDIPGIGRLFQRNIRNRDKRVLMVFIKPIILRNERDNLHVTGEKYNYVRQYQLDWIRSQEAFEQTDDETVLPPLTQGNLPVPFSTPPQYSSKMTK
>NC_018139.1|WP_014841485.1|1338196_1339225_+|Gfo/Idh/MocA-family-oxidoreductase
MDNATIKWGILGTSFISEVMANAIQESKTSELVAIGSRTSEIAKRFSEKFAIPKFYDNYQSLILDSDIDVVYIGLPNHLHKEWIIRCAQAGKNILCEKPFVIGIEEIHEVISVIERTNVFCMEALMYRYHPFIKKLQEIIQSNTIGKIKLYNATYTANIAEIANPVAGGSIRNLGCYPISLVRLLANAEPIEIRGIGRMNSRNNTDSQASVLLKFEDDSIAAVSTADDIEMHWQFEVYGTKGHLKVETNPWLPGCEGNKVYLSLNNESTPREISVNAEKSLYTYQIDFINEQILKRDSKQFNKTSLLDSMGNAIVLETWLKQIIPLKPSLELSRVKDRAPHA
>NC_018139.1|WP_014841486.1|1339248_1341354_-|adenylate/guanylate-cyclase-domain-containing-protein
MDSNFKISIRVSIITLFVLLLSLVGFTIIGINYIAFNSVLNSSAKDSIEQTSLLVKERFEIYLNPLNQDLIKITNAINNGIISPDDSKQFDKFLFESIRYNPEIFMVYYGSTTGDFIGVDREQKGIIGLTHVINSVSPPVNVRYRLNEQGEIIGKKLLTRHYDPRVRPWYQQAIKAGKPIWTNVYTFYVFDKSDFLIPGITGASPIYNKNKQIKGVIALDLTIDGLQHFIRELELTKNTMIYVINNESNIIAFRTPQNKKDIRGKKLTPEWIKKLNIPLKKLDFNGFEPIIKSYTHDNQKYYLAYQPISSTNEKALWHIIIIVPETDVIEPLKDLSMRYILLTILVLLIGTLLVRIVSQRISNPIIQLTEEAKEITMLNLKPRPLLKTRIKEVSYMDKTLSSLRSSLASFQRYVPGSLVKKLMRSGKIAQVGGQSQTITILFSDIKDFTSISESTSPQKLMTYLSDYFQSMTEIVIQNEGTLDKYIGDAIMALWNAPSKDTNHALHACLTAKIMIERLNLLNQKNKYLGFPEFNIRIGIHTGDAIVGNVGSEDRLSYTALGDSVNLASRLESINKNYHTQIIVSHATFTQVSEKFPFRLLDEVAVRGKRESIEIYELITAQNLENLEQHKKEFQKAFSLYQKGFWKESISAFAKLTPAYSGDQLASVYIERCKVLAINPPANWDGIWREGKTDYSLLGKFD
>NC_018139.1|WP_014841487.1|1341497_1342658_-|legiobactin-import-MFS-transporter-LbtC
MKKNALLIVLLTWFLGNMDIHFLTPALPSLVDYFSVTPNTAQLTISLFLLGKALSMILWGLLSERYGRKPIFIGGLLLFILSNFLIALNHSILLFLVCRFLQGISVGATLLMGRAMINDTHNEQNATKYFAWLFTLAGLFICFLPFFGGLINSYWNWQIASLIIAAYGLLLLPLCRGLKETKPHYVKFPQLGHSIMVVFNHPLFVSYLLISALMMAGESAFNTSASFILIKGENFTSAQYGTIKTTMAIMHLLGTACCGLIAKYYHSIQLTKLGVRFFIFAAFLMWLFVFSAENIYLTFIVPMVIYYFGTGFIVASATASAVRPFPQQMALALAITLFCQFNCSAFFSFITSMIGIQQVENFMFLLSLVSILSFLALLKLQRMEPC
>NC_018139.1|WP_014841488.1|1342654_1343869_-|legiobactin-export-MFS-transporter-LbtB
MNKPVQKMMLSGQFLMILALEMTNPFLPLLIAHQSNTSVPSVVIYNTLSLILPMLANILLTPIWGLAADRYGYKPMLMRASWALVLTQASMIVVNSVFWILIIRLLQGAFAGFLVAMQTYALSITEWQNKSTQLSRLQSSKAIATSTAGFLGGLALSFTNYQGLFGLATLICLGTTVAMHYKLPSPPKHQIKKKSQTLNHSYTSKSVFFFLCVLIMLTQIAKFLPDPGFTLYLNKYCSNNLVLIGFLYSLPAMGMLCSSVWCGKQFDYCRSQPSLVNQYLIRYSVFGAILMIIQANVDNFYLFALIRILWGIVLAALLPALFALCSDRNLLPGYALGLANSFAKLGNLIGLLLGGLFAFYLPYPAIFMIIAGIYSLFAIFVYGYDRLNVRQMTDFSNSYFNVKS
>NC_018139.1|WP_014841489.1|1343861_1345604_-|siderophore-legiobactin-biosynthesis-protein-LbtA
MAAVLNNSYKINNSLHSLLLEKDLLVSQSEMEHFISIAHQQCLDRLQHAALREGLIDKEITSLHIHDYLDLLYHQQKKQKPEQTFDRWHLLKKELDESINNQALALAYYLCWQQSLKQQAKNHSSLWSWLSEQHNKQQILTFLEQWGCIGHPYHPNFRAKMGFIPEEVIRYSPEFNAQVDIPWLAIHRSVAFTSIDATSYSLLFAQHFAKEYQLWNYSVQKQQLDPEQYLPLPVHPWQWNNKLQTLASVLINSKQLLITEAFQKTKPSMSFRTMMPLDNKGPHLKLATAIHTTSALRTVSPASVSNSSPLSSWLRQLLTQYQSFEKPLFLARDLAGINTTHPSISPQNKKHLAMIVRENPLELIDASQTLVPVAALYALSPVSQHALFIEIIEASGMEPELYFIEYSRCILECQLHLLLSYGVALEAQQQNTLVIFQSHRPVGLVIRDLGGIRVCFNSLYETKPKPNLHPDSTISCHELSDLFNTFIYGNLLSNLTFCINCLHDNYNLTKRNLWILLKQIANQLLQNFKKKINPLIYQKFQQHLFSLPWQHKSLLSMRLNQNQDDLVFFSLDNPLSQDNE
>NC_018139.1|WP_080031659.1|1345736_1346822_-|siderophore-legiobactin-import-outer-membrane-protein-LbtU
MLYIRNYIRTRIILGILMLNVTGLAFADAGDSLFKNEKLTYDGHLFFNAANSAIQGEKYLLNQQLSNIKMGSELQVTDWNKMKGLLIYNTLPTPVAPQFYFEQFYDELQIESSNIFFAFGKKWLTFGNYKSDLIYKPLTKALGQTNEVAAIIGYDSLYYANASFFKPYSRISTSSLPLYYNLNTGVHNQSMDAGVSYLYSLAESQLFQYNKGFGGLLSQSLKTRVPGFATYFNLKYKKTSTYLTYVTAITPFALEDMSYNNRRASPKALSIQNSYDVNIKKFSFKMIGFYDYTFQALALGIPKQRLGLGLSATPFPYLGIQFQYSRDYSYGNNAIASGINHSVNGRNTKMNNLTLQTILNF
>NC_018139.1|WP_014841491.1|1347210_1347525_+|DUF4286-family-protein
MVIYEVNLTIDPEIFVQFQAWLKKHIAEIIQFPGFMQACILKQEKETKSGKEKLTVQYQLDNRDNLSRYLSELAPKMREEGIHLFQAKFFADRRIFEVQEIISK

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Crispr_ID: NC_018139_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018139_2

2697709-2697901

Orphan

Consensus_repeat	Method
TGACTTCACTGGATTTAAGCTGGAATG	PILER-CR

2 spacers

The CRISPR arrays of NC_018139_2

>merge|NC_018139|2|2697709-2697901|PILER-CR
ACTGCCCTGGATTTAAGCTGGAATGATTTAAGTAGTAAAAGCAGCTCAGAATTAGCGCAAGTCCTCGCAGCTATCCCTGCCCATTTGACATCATTAGATTTAAGCTGGAATGCTCTATACCGTAATCCAGGTTTAACTCGATCCTCTGCTGCTATTCTTGTTGGTATGACTTCACTGAATTTAAGCTGGAATT

>NC_018139|2|1|2697709-2697901|PILER-CR
ACTGCCCTGGATTTAAGCTGGAATGAT	TTAAGTAGTAAAAGCAGCTCAGAATTAGCGCAAGTCCTCGCAGCTATCCCTGCCCATTTG
ACATCATTAGATTTAAGCTGGAATGCT	CTATACCGTAATCCAGGTTTAACTCGATCCTCTGCTGCTATTCTTGTTGGTATG
ACTTCACTGAATTTAAGCTGGAATT

Protein	Signature genes	Signature genes Name	Protein_function
NC_018139.1\|WP_014842439.1\|2704318_2705473_-\|hypothetical-protein	unknown	unknown	unknown
NC_018139.1\|WP_014842440.1\|2705806_2706904_+\|Dot/Icm-T4SS-effector-Lem23	unknown	unknown	unknown
NC_018139.1\|WP_014842438.1\|2703833_2704235_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239217
NC_018139.1\|WP_014842424.1\|2687098_2688403_-\|Dot/Icm-T4SS-effector-SdbC	unknown	unknown	unknown
NC_018139.1\|WP_014842430.1\|2692472_2693672_-\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
NC_018139.1\|WP_014842428.1\|2690541_2690901_+\|hypothetical-protein	unknown	unknown	unknown
NC_018139.1\|WP_014842442.1\|2707613_2708273_+\|hypothetical-protein	unknown	unknown	unknown
NC_018139.1\|WP_014842431.1\|2693726_2694299_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|275224
NC_018139.1\|WP_014842429.1\|2691028_2692099_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|316372
NC_018139.1\|WP_014842423.1\|2685825_2687058_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NC_018139.1\|WP_014842436.1\|2701111_2702626_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|365848
NC_018139.1\|WP_014842422.1\|2683987_2685265_-\|hypothetical-protein	unknown	unknown	unknown
NC_018139.1\|WP_011216283.1\|2689677_2690142_-\|bacterioferritin	unknown	unknown	gnl\|CDD\|225104
NC_018139.1\|WP_014842435.1\|2700007_2700928_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176155
NC_018139.1\|WP_027220836.1\|2694487_2695834_-\|YdgA-family-protein	unknown	unknown	gnl\|CDD\|377603
NC_018139.1\|WP_014842441.1\|2707085_2707391_-\|lpg2407-family-Dot/Icm-T4SS-effector	unknown	unknown	unknown
NC_018139.1\|WP_014842443.1\|2708598_2709417_+\|Dot/Icm-type-IV-secretion-system-effector-Ceg29	unknown	unknown	gnl\|CDD\|372614
NC_018139.1\|WP_014842437.1\|2702922_2703837_+\|hypothetical-protein	unknown	unknown	unknown
NC_018139.1\|WP_014842434.1\|2698525_2700031_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NC_018139.1\|WP_014842425.1\|2688672_2689557_+\|Dot/Icm-T4SS-effector-LegL6	unknown	unknown	gnl\|CDD\|238064

Protein	Function_ID	Function_description	E-value
NC_018139.1\|WP_014842430.1\|2692472_2693672_-\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	4.14344e-17
NC_018139.1\|WP_014842438.1\|2703833_2704235_+\|NUDIX-hydrolase	gnl\|CDD\|239217	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase.	3.24357e-18
NC_018139.1\|WP_014842429.1\|2691028_2692099_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|316372	pfam13847, Methyltransf_31, Methyltransferase domain. This family appears to have methyltransferase activity.	4.9227e-26
NC_018139.1\|WP_014842423.1\|2685825_2687058_-\|MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.76982e-78
NC_018139.1\|WP_014842436.1\|2701111_2702626_-\|cytochrome-P450	gnl\|CDD\|365848	pfam00067, p450, Cytochrome P450. Cytochrome P450s are haem-thiolate proteins involved in the oxidative degradation of various compounds. They are particularly well known for their role in the degradation of environmental toxins and mutagens. They can be divided into 4 classes, according to the method by which electrons from NAD(P)H are delivered to the catalytic site. Sequence conservation is relatively low within the family - there are only 3 absolutely conserved residues - but their general topography and structural fold are highly conserved. The conserved core is composed of a coil termed the 'meander', a four-helix bundle, helices J and K, and two sets of beta-sheets. These constitute the haem-binding loop (with an absolutely conserved cysteine that serves as the 5th ligand for the haem iron), the proton-transfer groove and the absolutely conserved EXXR motif in helix K. While prokaryotic P450s are soluble proteins, most eukaryotic P450s are associated with microsomal membranes. their general enzymatic function is to catalyze regiospecific and stereospecific oxidation of non-activated hydrocarbons at physiological temperatures.	6.65304e-21
NC_018139.1\|WP_011216283.1\|2689677_2690142_-\|bacterioferritin	gnl\|CDD\|225104	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism].	2.23076e-20
NC_018139.1\|WP_014842434.1\|2698525_2700031_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.04514e-19
NC_018139.1\|WP_014842435.1\|2700007_2700928_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176155	cd08466, PBP2_LeuO, The C-terminal substrate binding domain of LysR-type transcriptional regulator LeuO, an activator of leucine synthesis operon, contains the type 2 periplasmic binding fold. LeuO, a LysR-type transcriptional regulator, was originally identified as an activator of the leucine synthesis operon (leuABCD). Subsequently, LeuO was found to be not a specific regulator of the leu gene but a global regulator of unrelated various genes. LeuO activates bglGFB (utilization of beta-D-glucoside) and represses cadCBA (lysine decarboxylation) and dsrA (encoding a regulatory small RNA for translational control of rpoS and hns). LeuO also regulates the yjjQ-bglJ operon which coding for a LuxR-type transcription factor. In Salmonella enterica serovar Typhi, LeuO is a positive regulator of ompS1 (encoding an outer membrane), ompS2 (encoding a pathogenicity determinant), and assT, while LeuO represses the expression of OmpX and Tpx. Both osmS1 and osmS2 influence virulence in the mouse model of Salmonella. In Vibrio cholerae, LeuO is involved in control of biofilm formation and in the stringent response. The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.08073e-60
NC_018139.1\|WP_027220836.1\|2694487_2695834_-\|YdgA-family-protein	gnl\|CDD\|377603	pfam06097, DUF945, Bacterial protein of unknown function (DUF945). This family consists of several hypothetical bacterial proteins of unknown function.	9.17941e-75
NC_018139.1\|WP_014842443.1\|2708598_2709417_+\|Dot/Icm-type-IV-secretion-system-effector-Ceg29	gnl\|CDD\|372614	pfam13475, DUF4116, Domain of unknown function (DUF4116).	2.09851e-05
NC_018139.1\|WP_014842431.1\|2693726_2694299_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|275224	TIGR04431, aminoglycoside-6'-N-acetyltransferase_type_Ib, aminoglycoside N(6')-acetyltransferase, AacA4 family. Members of this family are the aacA4 type of aminoglycoside N(6')-acetyltransferase (EC 2.3.1.82), an enzyme that modifies and inactivates aminoglycoside antibiotics such as kanamycin, neomycin, tobramycin, and amikacin. Members are regularly spread among pathogens into integron, transposon, and plasmid loci, with recombination often happening within the protein-coding region. Most of the region amino-terminal to the recombination site or sites was removed from this model. [Cellular processes, Toxin production and resistance].	4.30832e-20
NC_018139.1\|WP_014842425.1\|2688672_2689557_+\|Dot/Icm-T4SS-effector-LegL6	gnl\|CDD\|238064	cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).	1.00468e-06

>NC_018139.1|WP_027220836.1|2694487_2695834_-|YdgA-family-protein
MRKWIISLLLLIIIVLCSYPIIGMMALSTVKKNVDNIPKSPFLTWQLKDNQSGWFCSTAVLNLLVDLPAQENKDAQGNIKIQPALHLSMDFPMIVRHGPFIMTNNGLRFGLAWVTTKPETHYGALINYLNQTAVSYSLPSINMKGTNNGDQGKFVFVWQGLSASLKVNPRIDKASGHVTMYGMSTQVQETDVRIGKVKVNFALNRYMDNLWLGDSSIMLSSISTVTNSQPVFDLQNLGMDAWAGVNNNLLDFNLQLSLNKFLMNNNSYGPGQLKIEVKNLDPQAMAKLNHLNYDYPSNQIAILAEIFNLLSKGATLNLNQELDTPQGHLSSSLNLALTKSSFSNPGDLLQNLKGNGQFKAPIKLVKQLLFESIKSKTATPAADMSQSQVTEPLVDADAEAHKQTEELLQKLVSKGILKVEGDYYQASFTLENTKFTVNGQPFDPALLN
>NC_018139.1|WP_014842431.1|2693726_2694299_-|GNAT-family-N-acetyltransferase
MALIRDSKSQVMSVFKFQPLGIKDLNQLYQWFQEPIINHWYARDKSWSLDEITEKYEPRIAGMEHVPSFIVYKYDLPFGFVQFYLLTDSLPDGIDGYESLLFEKYNPRDLAGIDLFIAESEGRGRGLGVELINRFIDKFLTRFKAVVVDPDVNNQQAIRCYEKAGFQQTGFSQDPNHLIMIKPLSLITGN
>NC_018139.1|WP_014842430.1|2692472_2693672_-|M23-family-metallopeptidase
MIKSFRVTIFLFLVSGLILARDMHAFPSGLESNQDKLVYFQLEAETFYSPKPVTIEGQLYLTYEVFLANVGDYLFSLENVEVLNGRKPYKVLFSYNQEELRKMIYSFSGHSNHLTSDLTLRPGERGLLFFMVKFDSLDEIPEKIMHRFHLYSSKTKISEEDVRYSFLAAPAYVKITKPLVIANPLDGKHWMAINGPSNHSIHRRARVAAHGIVYYPERYAIDFMQFGADGHVYKENPNKNENYYSYGANVYSVADGEVVAVYDGVPDNTPPGRDYPVTLSNMAGNHVIIKIGKHQYALYAHLIPHSIKVTKGELVRKNQLIAKLGNSGNSDAPHLHFHVIDKPSPLIGQGIPYAFEHFSTEEYRFAGDEWESPIVYEGRLTEHHHELVHENALMNFEEK
>NC_018139.1|WP_014842429.1|2691028_2692099_-|class-I-SAM-dependent-methyltransferase
MKTGRFDQARADAFAERLLSVLNDAALTLMISIGHRTGLFDVMDELDFASSEVIAEAAGCNERYVREWLNALVVGGIVDYDAHAKAYQLPAEHASFLTRKSSPQNMAVVAQFISVLAYVENGVVHAFKHGGGVPYEAYHRFHEVMAEESGQTILSSLTDKILPMVHGLVDKLNQGIQVLDIGCGYGRALILMAKTYPQSQFTGYDLCDETIAHAVHAAKKNKIQNIHFEKMDLSVWDEQEKYDLITSFDVIHDQAKPAQVLRNVFKALKPQGIFLMQDIKTSSDVAGNVHHPLGALIYTISCMHCMTVSLSQNGLGLGAAWGEELAEKMLVEAGFGKIEKHYLEHDIMNTYYVMRK
>NC_018139.1|WP_014842428.1|2690541_2690901_+|hypothetical-protein
MSNKAKNTHLKNGDSQTKQAYTNQASPLFFSQKQITPSSGTLETKKPQEGKQPTQEISLETTTDILLAAILQELKTQNMIELMKLKAQQEQEQEELETIEAMKEKDDARFNEIRQTMYA
>NC_018139.1|WP_011216283.1|2689677_2690142_-|bacterioferritin
MKHRRSETQDIDDAIIKTLNKLLEIELAGVVRYTHYSFMVFGFNRIPICKWMRDQAQESLNHAHLIGELITHFSYHPTLKIGKLLETHEHNISNILEESLEHERQSLDLYYQLLQYSENKSVLVEEFARQMIQEEEMHLGEISKMLNSPTTFKD
>NC_018139.1|WP_014842425.1|2688672_2689557_+|Dot/Icm-T4SS-effector-LegL6
MFYELILTRTSNLIQEFISIPHGVISLDLSLNELGNISNAELIQAFQYIPDSVISLDLANNHLCDKSGAELAQLLAAIPANVTSLNLSCNDLHKKSGAELAQAFAAIPASVTSLNLHCNYLGNNRGVELAQAFAAIPENVTSLDLSMNYFDLESSADLSQIFTSIPPHVASLNLSFNSLHEVPFEKLVLLKDSLKHVQTVYFSFYSVKEMSKEQRRALGAAFPNTQKIILIDDYGHEIQPSITISNLIRELSGKADAPSLLNQCILFTQRHQKDSDNKIIPKELEESIRTFNSR
>NC_018139.1|WP_014842424.1|2687098_2688403_-|Dot/Icm-T4SS-effector-SdbC
MPNSSIQIWLQRQIALRTFPPNREDWYVKNGFGNSEMSLEERFACFVEVMRQEDSPYHEQLSGIDFHRFEIEVTLANQKTCMTEVIGFQNNSNQSSSLLNEKVKAVGKGKHVIYFTGIGTQYQDCLIDIAKAVQITGAHYYAFEYPGMRKLGGEVLEVNDMVNTGIALANTLLEKGISIDDILFQGDSFGAAVAKKVSDQFKLQSNVTVRCILNNTFSTFQAAVEGNLGAFSTLRYTVRPLLRYTGWDIRPGDNYGLDTPYQIHINHTGDLTLGAGHATLAESVESNSQLEHFVDPCPEEYRIKRDIYKQWHWASLSEQGIRFLETKYGRNSDGQLDTHLADLYLLKYDTGLGVYESFICKYLEDSNDYIANHPQKLSLEELPSPLESETVSLGQLIVSVLPSRPSIAGFFGRPKPVKDEVDAENQAQKSIELK
>NC_018139.1|WP_014842423.1|2685825_2687058_-|MFS-transporter
MDKKIIAAASFGTLFEMYDYAIYGFMAPILAPLFFPATDKHTALIATFGIFAAGFLVRPFSAYWLGDLGDKIGRKKTLTMTLMVMTFSSSFIGLLPTYQEAGILAPILLTLCRLTQGVSVAGEMTLASIYIYENVNMRHKGLAVSFVTLGSICGLLLAIIVSKITLIFFSSQFPDFLWRFPFLIGIFVGFIGLYLRSQTRELTDFAKVIVQRQSHPILNAWRYRKKAIAAIFLLAIYCNSSFYTFFVYMPSYLQQQELPLTTAMDVIIIGMICYSMGLLLSGFTSDILGRRFPLAVSLIATLCTVLVINYLINTGTLLQITVACSVLAVIISFFIGSAFTASLEQLPQEERASGFTLFFNLSNSLFGGTAPLIILLLSYAFIHFAFSIYLMVMALLTLPALWLIQEKGTN
>NC_018139.1|WP_014842422.1|2683987_2685265_-|hypothetical-protein
MKNNKRTNDQNADQKSSQYIYVEKKEIGGIDTEIITESHYPIPWGSASERPLDYYEKQSKIITYYKEDIDLDGNPFSKRIEIEIPEVEEGENRHRRIKVKVDGNPIIFQDDNILDMDETFNIRDVNLLIHMVLNNFHPKSNSTCFQTITPFIHLPGTGGDKDYEFNQKNNGDVSKVLLPYVQEMCSLNNSSVVRQLLIPVATKGGPHHWNLCMLFIDENNIPSLYYIESENLLTSFDYYTYMYYMEDYKMHILPEVNALLAKFHYPAIDKVNFCQAKQFSQEGCGIAMGLNMQKILEEKYPQVICYSNTPRKGIPSRTEIRCLSSNVSIEEDALMRVELAFKIQARASIIAEGALDAEMVEKKSLVCSEILSDSRSLNVKAKEAFGFFQSAQPGISSEMHSVMAQDKGNDETSSSDINAEACRLW
>NC_018139.1|WP_014842434.1|2698525_2700031_+|serine-hydrolase
MSYMKIEELLLKDTMRRAQIPGVSIAYINHQGVISTQEIGLTDGCGLVKMSSDPTQCPFQELVIGSNNKLGVGTKNTVIAFNKELYYVDQAEKNVRKIPLTEANKIAYETLHAKCTETYQLADSNEHELIATLTGRMPPTEVKPETVFGAASLSKPVFAYLVQKLIQTNAKNQSEAGFDQFILPEKLKHFDLDTPLFHMIPLEEFNIDGMKFDLSDESIVAHSKILTARTVLSHTTGLAHGEMKFQFLPNSEEKEHGYSNVGIIYLQQVIEKLTGSDLETLAQKHVFEPCGMIHSTYGLKACAANSLRTTACDYANFVKHLIHDSTIENPFVPHAYMTKDKGQAGAIGIAKGNIPDSILQHVAWGLGWGLQTNDEGRVITAYHSGDMNDYRAWVVIDLQDKDKKNAVVFFANSHNGHILAEQIIPKTMQMEQAANYFFSKWGFARNLAELGGKTTRLGIKSSSDSSPDTSIQDEPVEIKKETEKSDTSSIETYTSGWTFNA
>NC_018139.1|WP_014842435.1|2700007_2700928_-|LysR-family-transcriptional-regulator
MAIPFKRINLNLILHLDALLSERSVSAAAEKVFVSQPAMSSSLKQLRELFKDPLLIPGKGEYYLSPKAKELQPQLEQVMFFIRNILQPNERFDPFQTKRSFKIALPDYVELILLPSLMAALEKLPHIVIETTIQSMADDPHLFIDENVDLAIGAINENSLSAQLKVEKLYEEEIICFASKNNPLINRPLSLEDYISNKHIAFSFNQERYSHSAEYLYKRKLVRNDMLFVKNILPAIFAVANSDAVISTAPSFLINMFARQFNLGMQPLPFNLEPTPIYLVTHSKSQYDEGVSWLAKLVSSSIKSPS
>NC_018139.1|WP_014842436.1|2701111_2702626_-|cytochrome-P450
MFGELFASSIVLGVRYYSNQAYQAVVGILGQIERFGIGYTREFIRDPKSMIQSLTSKARSSEAGYSVVSLGYLGGNYAVITPKSQSQLTELLNQFDQEKSGRRGHASFKFFSGNDFFIISDTGHAALSSRKNLSRFLVPSRLVSPTITEVEKRVDCDADIQLRHTICGIVRAVMVENMLGIKQLPDNTYDVMESYRNDVKRWGAFPFPELLNFMPSLRQKRDVYRAFSKGILEQEFEKLVEVLHADPNPGNTNLIAASVVSLFKDENPTLSNEELLSALRSLSIEDIRKYFDNPIVQSLPMILKAADNLTDAIVLCLEQIASDPDKFVMLRDEMDRSHLVIEEGIDVRALKTLPVLDAFYKESVRFDAPVAVPRYTQNGYSSDSMTIPPNTMMIFDLHALAKGEQYWTNPEEFDPTRFLQQEKKQVTEEGGMNSNNKNHTVGQFPFIPFSVGLRNCPAFAVTESLFKVTIAKFVSDYQLQLVKKDEEDSTLHITSRDKSFGLMQ
>NC_018139.1|WP_014842437.1|2702922_2703837_+|hypothetical-protein
MATTLIQKPSYTKNLTLNLDDYPGGVAIWGALPALFDTSNQGFDRGVHVHARLADSSKKVIDATYGHVTVISGYRIFTITEEAAVHFSMSAIFDIKITSLTCQHCSQLITSVGYAAVMPSRQHQCNHCGEITTTTSDCISNPIMLLKELIGDEQVKRPAVIPNRTIAIDPDKYSGGIQIWGSNPSIIWTAKRLEESAIHIHAYNENGKRIIDNTYGSVSLDGHKLDIEMIRVLQIQLALPNLALLLTTVYCPHCGVEQFDRGIWAVSAHNHRVCLLCKQTFISQDVISNPAFDVLTHVSGVISQ
>NC_018139.1|WP_014842438.1|2703833_2704235_+|NUDIX-hydrolase
MSTLKTIFKIGALIFNEKNQLLAVHKKGKPPMELIVPGGVMEENESDEETLRREIKEELDSDIISFQFYKQFEDKAIYEEKWLVMRTYIVTLGNAPKPANEIDQLVWLGHDYHQRGYRFGSILGKQIIPDFFK
>NC_018139.1|WP_014842439.1|2704318_2705473_-|hypothetical-protein
MKVLFDKTVQNNPGSGITPSSKSNEICTSSICMKSKLPADVVAKHLHGLQSTMVDRRNPDLSDSKSLMKSAKAHAILKTGTEIDMLTATGISEDDLPSSKGAIPMTAPEELTMKATWKNKNQERGISGRDASVFGGLGVLVISPDTKVMNIPKMNALAVPASFLAKYGAELIPLDQPFTLDTVDKSSLENLYLVEYQWDADYIQDYVMNIRGGGGLFVETHPFPHVFTPLSPACRGALILGVERKDGAFDFAAFEIPFGYTMKIASNVIHGDSFFVGPYAIALTETELADSVLLKQDTPQRDIQRVTQVPTKVFTIFLIEETKLASQINRKMMADKICHEGLSGKRLGFFKESSPKVSTEVRHCSDAEQDIHDQQFGLVPCLTK
>NC_018139.1|WP_014842440.1|2705806_2706904_+|Dot/Icm-T4SS-effector-Lem23
MKRKDEQNNLTKGKVNEQNTVSTNTNLLFSKPPGINADTTNHMASSIDRLKDFDSSKQSLWLKYSEEIINEFCALLPEFPKKKPKVREDIRCPEEALLTQVGCAYAFLASKRREVAKLLKHGPLRHQFGLFNKPGFASIDDFNLSKDIPSQKDKIYEHLSLLISQPNPFIEVKKNHREAEGFSIYTITFKMKPDEIEQVHKKNLDSNKPFIENDTVLTITFNDYGKNDNRTSIVIDHRPTPFAENYTNESSYFKVQFELIEPYFQACQTWEASDGIDQFLENAGRIAYILARMQPVGRGNSAIVEWMIRGLAQTKNIELGPFNPDEKIGWDFKAFLTPEIQDYAHWFSEKAFAYSQLKNVTSLGH
>NC_018139.1|WP_014842441.1|2707085_2707391_-|lpg2407-family-Dot/Icm-T4SS-effector
MYNVVSFNNEGVEHMKPTNEKSKEIRKKYKAPGASDEQLANSIKVASEFEYKNSSTFGWGGVYMVDRFQSMITGRAITNNTQRLLDAQALEEEASKANLKQ
>NC_018139.1|WP_014842442.1|2707613_2708273_+|hypothetical-protein
MLTKNLNEALSAIKYVKSKLVYGSNTEENSKKPNWEPGRIILLRKEVHALAVVYARSHNGKAGFDIISKLTHAALLKYGFGNCGEQAQTAFCYLQSRGVAPLDYCQTSIGEHCLIVIGRVSGSDPNDISTWGEDAVICDPWAEKAYPLSEFRAMQSPDNDIRYPEICYANGKSPKPYLAGELISHHRIEPASKASSLSFFKKENYEHSQLNSATPMLIA
>NC_018139.1|WP_014842443.1|2708598_2709417_+|Dot/Icm-type-IV-secretion-system-effector-Ceg29
MTNSNHLRNPVTKSLNDLCQDELSVIGSYLGAWNDLWSLTFTSSEMKKCLIHQQTDELWKFFFKEFFPYIPLPTEDFYKNFMKNYKTWYQTLYRVKQDPFFLMYLDKLKEDPAHLFRNDKEIIIAAIEKQPFLYKNFSRGYKEDEEVILCALKNNRFIIHDVPRTVREGFKEIADIKEDKARVDACDQLIEKLSPQRVSKIKSLDLFKSQLTLQAQNITKKSGEQVNNRQLQRSTAPITPEGITSLVHLGLFRDTQIQYEEKEESLHNKYRK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

941044 : 947883

Acinetobacter_phage(42.86%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011945950.1\|941044_941821_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.9e-57	48.2
WP_014841226.1\|941813_942848_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	2.7e-75	47.3
WP_014841227.1\|942825_943404_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.0e-55	52.6
WP_010946572.1\|943437_944163_-	LPS export ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-17	28.3
WP_041174037.1\|944159_944669_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
WP_010946574.1\|944649_945219_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_011213328.1\|945215_945743_-	3-deoxy-manno-octulosonate-8-phosphatase KdsC	A0A140XBD6	Dickeya_phage	1.4e-27	47.7
WP_010946576.1\|945756_946719_-	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	4.2e-38	34.1
WP_010946577.1\|947085_947883_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.3e-21	33.8

DBSCAN-SWA_2

1236517 : 1242455

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014841413.1\|1236517_1237591_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	2.1e-30	28.6
WP_041174046.1\|1237575_1238190_+	riboflavin synthase	A0A2I2L4R9	Orpheovirus	1.0e-21	38.4
WP_014841415.1\|1238186_1239395_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	4.5e-98	48.2
WP_014841416.1\|1239402_1239870_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	4.1e-23	50.0
WP_010946915.1\|1239996_1241634_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	3.6e-154	52.3
WP_010946916.1\|1241630_1242455_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.8e-53	43.9

DBSCAN-SWA_3

2192045 : 2202167

Bacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014842062.1\|2192045_2193734_-	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	8.0e-16	30.4
WP_014842063.1\|2193865_2194873_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_014842064.1\|2194995_2196321_-	adenosylhomocysteinase	S4VPF6	Pandoravirus	1.4e-47	31.2
WP_014842065.1\|2196339_2197488_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	9.9e-127	58.5
WP_014842066.1\|2197696_2198809_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	8.6e-51	34.9
WP_010947740.1\|2198904_2200044_-	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	1.6e-23	26.9
WP_011946925.1\|2200232_2202167_-	molecular chaperone DnaK	G8DDB7	Micromonas_pusilla_virus	1.3e-147	49.6

DBSCAN-SWA_4

2612311 : 2646231

Acinetobacter_phage(25.0%)

transposase,integrase

attL 2633253:2633299|attR 2643999:2644045

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014842361.1\|2612311_2615356_+\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_154080659.1\|2615711_2615873_-	hypothetical protein	NA	NA	NA	NA
WP_014842362.1\|2616026_2617175_+	outer membrane beta-barrel protein	NA	NA	NA	NA
WP_014842363.1\|2617204_2618323_+	DUF3494 domain-containing protein	NA	NA	NA	NA
WP_154080660.1\|2618626_2618785_+	hypothetical protein	NA	NA	NA	NA
WP_027265134.1\|2618832_2619174_+	helix-turn-helix domain-containing protein	A0A218MNC9	uncultured_virus	4.5e-11	39.0
WP_027265133.1\|2619190_2619682_+\|transposase	IS630 family transposase	A0A1V0SCG6	Indivirus	1.3e-11	25.8
WP_014842364.1\|2619930_2620182_-	hypothetical protein	NA	NA	NA	NA
WP_014842365.1\|2620262_2620457_-	CsbD family protein	NA	NA	NA	NA
WP_014842366.1\|2620589_2620943_-	PRC-barrel domain-containing protein	NA	NA	NA	NA
WP_014842368.1\|2621799_2622303_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014842369.1\|2622305_2623487_-	acetylornithine deacetylase	NA	NA	NA	NA
WP_065211439.1\|2623791_2623959_+	DUF3309 domain-containing protein	NA	NA	NA	NA
WP_014842370.1\|2624083_2625289_+	fatty acid desaturase	NA	NA	NA	NA
WP_014842371.1\|2625495_2627271_-	SLC13 family permease	NA	NA	NA	NA
WP_080031823.1\|2627610_2628045_+	TIGR00341 family protein	NA	NA	NA	NA
WP_014842373.1\|2628080_2628407_+\|transposase	transposase	NA	NA	NA	NA
WP_110540214.1\|2628465_2628906_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_014842375.1\|2628921_2629248_+	DUF389 domain-containing protein	NA	NA	NA	NA
WP_014842376.1\|2629515_2630526_+	fatty acid desaturase	NA	NA	NA	NA
WP_014842377.1\|2630820_2631156_+	hypothetical protein	NA	NA	NA	NA
WP_014842378.1\|2631325_2632657_+	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	3.0e-58	35.6
2633253:2633299	attL	NA	NA	NA	NA
WP_014842379.1\|2633412_2634288_+	hypothetical protein	NA	NA	NA	NA
WP_014842380.1\|2634419_2635925_-	cytidine deaminase	V9LZ62	Vibrio_phage	9.9e-10	36.4
WP_014842381.1\|2636322_2636586_+	hypothetical protein	NA	NA	NA	NA
WP_014842382.1\|2636587_2636854_+	hypothetical protein	NA	NA	NA	NA
WP_014842383.1\|2637070_2637436_-	TraK family protein	NA	NA	NA	NA
WP_014842384.1\|2637874_2639641_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	2.6e-54	29.7
WP_014842385.1\|2639720_2639975_-	DNA-binding protein	A0A0N7IRE8	Acinetobacter_phage	5.5e-06	40.6
WP_014842386.1\|2640437_2641244_-	metallophosphoesterase	NA	NA	NA	NA
WP_027220510.1\|2641255_2641927_-	hypothetical protein	NA	NA	NA	NA
WP_014842389.1\|2642609_2643839_-\|integrase	integrase family protein	A0A0P0IKP2	Acinetobacter_phage	1.8e-49	32.8
WP_014842390.1\|2644149_2644848_+	hypothetical protein	NA	NA	NA	NA
2643999:2644045	attR	NA	NA	NA	NA
WP_013101389.1\|2645019_2646231_+\|transposase	IS4 family transposase	A4KWT9	Enterobacteria_phage	1.1e-72	36.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_018139

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection